Multiple sequence alignment - TraesCS4D01G133700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G133700 chr4D 100.000 6446 0 0 1 6446 120094991 120088546 0.000000e+00 11904.0
1 TraesCS4D01G133700 chr4A 94.390 2228 91 15 3728 5939 451748168 451745959 0.000000e+00 3391.0
2 TraesCS4D01G133700 chr4A 94.362 940 44 4 2598 3529 590370480 590371418 0.000000e+00 1434.0
3 TraesCS4D01G133700 chr4A 92.680 929 65 3 1512 2438 590357609 590358536 0.000000e+00 1336.0
4 TraesCS4D01G133700 chr4A 91.056 928 81 2 1509 2436 659824937 659824012 0.000000e+00 1253.0
5 TraesCS4D01G133700 chr4A 90.157 447 25 14 880 1319 451749060 451748626 1.210000e-156 564.0
6 TraesCS4D01G133700 chr4A 94.030 201 4 4 1313 1508 451748594 451748397 1.360000e-76 298.0
7 TraesCS4D01G133700 chr4A 87.132 272 21 7 591 857 451749400 451749138 4.890000e-76 296.0
8 TraesCS4D01G133700 chr4A 85.714 182 12 6 3527 3694 451748412 451748231 5.130000e-41 180.0
9 TraesCS4D01G133700 chr4A 92.308 91 5 1 2477 2567 590370398 590370486 1.890000e-25 128.0
10 TraesCS4D01G133700 chr4B 96.717 1188 35 3 4664 5851 183519852 183518669 0.000000e+00 1975.0
11 TraesCS4D01G133700 chr4B 93.444 1083 56 8 3527 4605 183520907 183519836 0.000000e+00 1592.0
12 TraesCS4D01G133700 chr4B 91.906 556 30 4 45 589 183522457 183521906 0.000000e+00 763.0
13 TraesCS4D01G133700 chr4B 88.099 647 37 22 880 1508 183521516 183520892 0.000000e+00 732.0
14 TraesCS4D01G133700 chr4B 89.394 264 20 6 591 852 183521873 183521616 6.230000e-85 326.0
15 TraesCS4D01G133700 chr4B 84.815 270 37 4 6095 6361 108505446 108505714 1.070000e-67 268.0
16 TraesCS4D01G133700 chr5D 98.104 1055 17 2 2477 3529 485297809 485298862 0.000000e+00 1834.0
17 TraesCS4D01G133700 chr5D 94.502 1055 55 3 2477 3529 472395068 472394015 0.000000e+00 1624.0
18 TraesCS4D01G133700 chr5D 97.216 934 26 0 1508 2441 311803330 311802397 0.000000e+00 1581.0
19 TraesCS4D01G133700 chr5D 97.100 931 26 1 1508 2438 485295308 485296237 0.000000e+00 1568.0
20 TraesCS4D01G133700 chr5D 92.712 933 65 2 1507 2438 472397585 472396655 0.000000e+00 1343.0
21 TraesCS4D01G133700 chr5D 89.259 931 100 0 1508 2438 426472974 426473904 0.000000e+00 1166.0
22 TraesCS4D01G133700 chr5D 82.865 356 53 8 6095 6444 254854799 254855152 4.850000e-81 313.0
23 TraesCS4D01G133700 chr5D 82.090 268 44 4 6096 6360 317658161 317657895 6.500000e-55 226.0
24 TraesCS4D01G133700 chr2D 97.725 1055 22 1 2477 3529 552120006 552121060 0.000000e+00 1814.0
25 TraesCS4D01G133700 chr2D 97.207 931 25 1 1511 2441 405178984 405178055 0.000000e+00 1574.0
26 TraesCS4D01G133700 chr2D 97.100 931 27 0 1508 2438 552117489 552118419 0.000000e+00 1570.0
27 TraesCS4D01G133700 chr2D 96.957 460 12 1 2477 2934 405176471 405176012 0.000000e+00 771.0
28 TraesCS4D01G133700 chr3A 87.867 1055 125 3 2477 3529 394113009 394114062 0.000000e+00 1236.0
29 TraesCS4D01G133700 chr2B 88.134 927 106 4 1509 2435 648368922 648368000 0.000000e+00 1099.0
30 TraesCS4D01G133700 chr2B 97.143 35 1 0 6338 6372 756181731 756181697 6.980000e-05 60.2
31 TraesCS4D01G133700 chr1D 81.644 1046 181 5 2477 3520 437531221 437532257 0.000000e+00 857.0
32 TraesCS4D01G133700 chr6D 85.342 307 41 3 6142 6444 166795055 166795361 1.350000e-81 315.0
33 TraesCS4D01G133700 chr6D 83.475 236 30 7 6095 6328 24317581 24317809 1.820000e-50 211.0
34 TraesCS4D01G133700 chr7B 84.615 286 33 8 6095 6372 254089914 254089632 2.290000e-69 274.0
35 TraesCS4D01G133700 chr7B 79.570 93 19 0 3437 3529 4357323 4357415 4.170000e-07 67.6
36 TraesCS4D01G133700 chr7B 89.091 55 4 2 4609 4662 12207561 12207508 4.170000e-07 67.6
37 TraesCS4D01G133700 chr7B 89.091 55 4 2 4609 4662 12242691 12242638 4.170000e-07 67.6
38 TraesCS4D01G133700 chr6A 83.630 281 42 4 6095 6372 256467748 256467469 1.780000e-65 261.0
39 TraesCS4D01G133700 chr3D 85.317 252 35 2 6095 6344 10394177 10394428 6.410000e-65 259.0
40 TraesCS4D01G133700 chr3D 83.333 252 40 2 6095 6344 10557350 10557099 1.400000e-56 231.0
41 TraesCS4D01G133700 chr2A 80.620 129 21 3 6319 6443 598624792 598624664 5.320000e-16 97.1
42 TraesCS4D01G133700 chr7D 79.412 102 21 0 3422 3523 151028768 151028869 8.970000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G133700 chr4D 120088546 120094991 6445 True 11904.0 11904 100.0000 1 6446 1 chr4D.!!$R1 6445
1 TraesCS4D01G133700 chr4A 590357609 590358536 927 False 1336.0 1336 92.6800 1512 2438 1 chr4A.!!$F1 926
2 TraesCS4D01G133700 chr4A 659824012 659824937 925 True 1253.0 1253 91.0560 1509 2436 1 chr4A.!!$R1 927
3 TraesCS4D01G133700 chr4A 451745959 451749400 3441 True 945.8 3391 90.2846 591 5939 5 chr4A.!!$R2 5348
4 TraesCS4D01G133700 chr4A 590370398 590371418 1020 False 781.0 1434 93.3350 2477 3529 2 chr4A.!!$F2 1052
5 TraesCS4D01G133700 chr4B 183518669 183522457 3788 True 1077.6 1975 91.9120 45 5851 5 chr4B.!!$R1 5806
6 TraesCS4D01G133700 chr5D 485295308 485298862 3554 False 1701.0 1834 97.6020 1508 3529 2 chr5D.!!$F3 2021
7 TraesCS4D01G133700 chr5D 311802397 311803330 933 True 1581.0 1581 97.2160 1508 2441 1 chr5D.!!$R1 933
8 TraesCS4D01G133700 chr5D 472394015 472397585 3570 True 1483.5 1624 93.6070 1507 3529 2 chr5D.!!$R3 2022
9 TraesCS4D01G133700 chr5D 426472974 426473904 930 False 1166.0 1166 89.2590 1508 2438 1 chr5D.!!$F2 930
10 TraesCS4D01G133700 chr2D 552117489 552121060 3571 False 1692.0 1814 97.4125 1508 3529 2 chr2D.!!$F1 2021
11 TraesCS4D01G133700 chr2D 405176012 405178984 2972 True 1172.5 1574 97.0820 1511 2934 2 chr2D.!!$R1 1423
12 TraesCS4D01G133700 chr3A 394113009 394114062 1053 False 1236.0 1236 87.8670 2477 3529 1 chr3A.!!$F1 1052
13 TraesCS4D01G133700 chr2B 648368000 648368922 922 True 1099.0 1099 88.1340 1509 2435 1 chr2B.!!$R1 926
14 TraesCS4D01G133700 chr1D 437531221 437532257 1036 False 857.0 857 81.6440 2477 3520 1 chr1D.!!$F1 1043

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
28 29 0.035439 GGGGGTCGTGTGATTCATGT 60.035 55.000 0.00 0.0 34.87 3.21 F
1044 1167 0.106868 TCTTCGGCTCCTCCATCGTA 60.107 55.000 0.00 0.0 34.01 3.43 F
2458 2653 0.039074 CGGGATGCGGTCATAGAGAC 60.039 60.000 0.00 0.0 46.83 3.36 F
2479 4237 1.447643 GCCGGGATGCTGTCATAGT 59.552 57.895 2.18 0.0 31.96 2.12 F
4094 5996 1.001020 TGATGGCCCTGAATGCGTT 60.001 52.632 0.00 0.0 0.00 4.84 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1982 2177 0.529773 TCTGCACTGCGTTTTCGTCT 60.530 50.0 0.00 0.00 46.03 4.18 R
2567 4325 0.107508 CCATCGTCAGGCCTGTCATT 60.108 55.0 31.58 13.62 0.00 2.57 R
3801 5702 0.179043 TCCAGTGGTGCGCACTTTTA 60.179 50.0 36.84 19.59 0.00 1.52 R
4334 6238 2.031333 CCTGCTTCTGCTCTGTTTTCAC 60.031 50.0 0.00 0.00 40.48 3.18 R
5931 7848 0.034670 GGCTCACTGATTTGCCCTCT 60.035 55.0 0.00 0.00 39.49 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 2.780595 GGGGGTCGTGTGATTCATG 58.219 57.895 0.00 0.00 34.61 3.07
28 29 0.035439 GGGGGTCGTGTGATTCATGT 60.035 55.000 0.00 0.00 34.87 3.21
29 30 1.208535 GGGGGTCGTGTGATTCATGTA 59.791 52.381 0.00 0.00 34.87 2.29
30 31 2.277084 GGGGTCGTGTGATTCATGTAC 58.723 52.381 0.00 0.00 34.87 2.90
31 32 1.924524 GGGTCGTGTGATTCATGTACG 59.075 52.381 12.11 12.11 34.87 3.67
32 33 1.924524 GGTCGTGTGATTCATGTACGG 59.075 52.381 15.91 4.13 35.63 4.02
33 34 1.924524 GTCGTGTGATTCATGTACGGG 59.075 52.381 15.91 0.00 35.63 5.28
34 35 0.650512 CGTGTGATTCATGTACGGGC 59.349 55.000 11.05 0.00 0.00 6.13
35 36 1.739035 CGTGTGATTCATGTACGGGCT 60.739 52.381 11.05 0.00 0.00 5.19
36 37 2.480587 CGTGTGATTCATGTACGGGCTA 60.481 50.000 11.05 0.00 0.00 3.93
37 38 3.527533 GTGTGATTCATGTACGGGCTAA 58.472 45.455 0.00 0.00 0.00 3.09
38 39 4.127171 GTGTGATTCATGTACGGGCTAAT 58.873 43.478 0.00 0.00 0.00 1.73
39 40 5.294356 GTGTGATTCATGTACGGGCTAATA 58.706 41.667 0.00 0.00 0.00 0.98
40 41 5.756347 GTGTGATTCATGTACGGGCTAATAA 59.244 40.000 0.00 0.00 0.00 1.40
41 42 6.259167 GTGTGATTCATGTACGGGCTAATAAA 59.741 38.462 0.00 0.00 0.00 1.40
42 43 6.259167 TGTGATTCATGTACGGGCTAATAAAC 59.741 38.462 0.00 0.00 0.00 2.01
43 44 5.464057 TGATTCATGTACGGGCTAATAAACG 59.536 40.000 0.00 0.00 0.00 3.60
60 61 0.693049 ACGCAAGATGGAGGAAAGGT 59.307 50.000 0.00 0.00 43.62 3.50
151 154 8.736244 GTTATACAAATGGTCAATGTGTAACCT 58.264 33.333 18.10 1.28 41.40 3.50
159 162 7.690952 TGGTCAATGTGTAACCTAAAATACC 57.309 36.000 0.00 0.00 34.36 2.73
164 167 7.827236 TCAATGTGTAACCTAAAATACCAGAGG 59.173 37.037 0.00 0.00 34.36 3.69
169 172 1.202770 CCTAAAATACCAGAGGGGCCG 60.203 57.143 0.00 0.00 42.05 6.13
175 178 2.112279 TACCAGAGGGGCCGATAAAT 57.888 50.000 0.00 0.00 42.05 1.40
176 179 2.112279 ACCAGAGGGGCCGATAAATA 57.888 50.000 0.00 0.00 42.05 1.40
177 180 2.414612 ACCAGAGGGGCCGATAAATAA 58.585 47.619 0.00 0.00 42.05 1.40
179 182 3.146847 CCAGAGGGGCCGATAAATAAAC 58.853 50.000 0.00 0.00 0.00 2.01
180 183 3.146847 CAGAGGGGCCGATAAATAAACC 58.853 50.000 0.00 0.00 0.00 3.27
182 185 1.854280 AGGGGCCGATAAATAAACCCA 59.146 47.619 0.00 0.00 39.22 4.51
183 186 2.158519 AGGGGCCGATAAATAAACCCAG 60.159 50.000 0.00 0.00 39.22 4.45
184 187 2.158579 GGGGCCGATAAATAAACCCAGA 60.159 50.000 0.00 0.00 39.22 3.86
185 188 3.146847 GGGCCGATAAATAAACCCAGAG 58.853 50.000 0.00 0.00 37.30 3.35
211 214 6.869913 TGAGAAAGTAGGTATTTGTACAACCG 59.130 38.462 8.07 0.00 38.37 4.44
224 227 2.663852 AACCGCCAACGAACTCGG 60.664 61.111 3.88 8.76 46.61 4.63
272 277 7.327761 GCCATTTCTAGTAATACTAAATCGCGA 59.672 37.037 13.09 13.09 29.00 5.87
275 280 7.792383 TTCTAGTAATACTAAATCGCGATGC 57.208 36.000 24.47 1.73 29.00 3.91
303 308 3.454371 AACACTCAAAGCTGTAGTCGT 57.546 42.857 0.00 0.00 0.00 4.34
330 335 1.405256 CGGATGCATCCTCTGATAGGC 60.405 57.143 36.51 12.24 46.10 3.93
341 346 4.177057 CCTCTGATAGGCGCCATAAATGG 61.177 52.174 31.54 17.69 44.27 3.16
378 383 1.534385 CGAGAGAGTGAGCATGCAGAG 60.534 57.143 21.98 0.00 0.00 3.35
495 507 2.554564 CCTGACATAGATGCATGGCCAT 60.555 50.000 14.09 14.09 32.50 4.40
606 649 2.325761 GTGTACTGATCGAAAGCACGT 58.674 47.619 0.00 0.00 34.70 4.49
648 694 5.468658 AGGTGGATTAGTAGCAGGAGTTAT 58.531 41.667 0.00 0.00 0.00 1.89
649 695 5.305644 AGGTGGATTAGTAGCAGGAGTTATG 59.694 44.000 0.00 0.00 0.00 1.90
650 696 4.991687 GTGGATTAGTAGCAGGAGTTATGC 59.008 45.833 0.00 0.00 44.18 3.14
651 697 4.653801 TGGATTAGTAGCAGGAGTTATGCA 59.346 41.667 0.00 0.00 46.31 3.96
652 698 4.991687 GGATTAGTAGCAGGAGTTATGCAC 59.008 45.833 0.00 0.00 46.31 4.57
653 699 2.586258 AGTAGCAGGAGTTATGCACG 57.414 50.000 0.00 0.00 46.31 5.34
654 700 0.931005 GTAGCAGGAGTTATGCACGC 59.069 55.000 0.00 0.00 46.31 5.34
655 701 0.534873 TAGCAGGAGTTATGCACGCA 59.465 50.000 0.00 0.00 46.31 5.24
681 727 1.069823 ACTGCAGTGGTCAGAGTCTTG 59.930 52.381 20.97 0.00 35.61 3.02
705 751 2.242452 GGGATGGGATTATTAGGGAGGC 59.758 54.545 0.00 0.00 0.00 4.70
715 761 1.983119 TTAGGGAGGCCGCCAATCAG 61.983 60.000 28.06 0.00 0.00 2.90
724 770 1.269448 GCCGCCAATCAGAGTTTTTGA 59.731 47.619 0.00 0.00 0.00 2.69
728 774 3.848019 CGCCAATCAGAGTTTTTGATTCG 59.152 43.478 0.00 0.00 41.91 3.34
792 839 1.294780 CACGCTGCTCCTCCTTTCT 59.705 57.895 0.00 0.00 0.00 2.52
793 840 0.739112 CACGCTGCTCCTCCTTTCTC 60.739 60.000 0.00 0.00 0.00 2.87
797 844 1.738700 GCTGCTCCTCCTTTCTCTTCG 60.739 57.143 0.00 0.00 0.00 3.79
802 849 2.829120 CTCCTCCTTTCTCTTCGTCCTT 59.171 50.000 0.00 0.00 0.00 3.36
803 850 3.240302 TCCTCCTTTCTCTTCGTCCTTT 58.760 45.455 0.00 0.00 0.00 3.11
804 851 4.413760 TCCTCCTTTCTCTTCGTCCTTTA 58.586 43.478 0.00 0.00 0.00 1.85
821 868 7.068103 TCGTCCTTTATTAATTGGACCGTACTA 59.932 37.037 19.94 5.70 44.29 1.82
857 907 1.817447 ACTAGAACGGTGGTAGTGCTC 59.183 52.381 0.00 0.00 0.00 4.26
858 908 1.134560 CTAGAACGGTGGTAGTGCTCC 59.865 57.143 0.00 0.00 0.00 4.70
859 909 0.830444 AGAACGGTGGTAGTGCTCCA 60.830 55.000 0.00 0.00 0.00 3.86
864 914 3.702048 TGGTAGTGCTCCACGGCC 61.702 66.667 0.00 0.00 39.64 6.13
865 915 3.702048 GGTAGTGCTCCACGGCCA 61.702 66.667 2.24 0.00 39.64 5.36
866 916 2.345991 GTAGTGCTCCACGGCCAA 59.654 61.111 2.24 0.00 39.64 4.52
868 918 0.887387 GTAGTGCTCCACGGCCAAAA 60.887 55.000 2.24 0.00 39.64 2.44
869 919 0.887387 TAGTGCTCCACGGCCAAAAC 60.887 55.000 2.24 0.00 39.64 2.43
872 922 2.193536 GCTCCACGGCCAAAACACT 61.194 57.895 2.24 0.00 0.00 3.55
875 925 0.470766 TCCACGGCCAAAACACTACT 59.529 50.000 2.24 0.00 0.00 2.57
878 928 2.549349 CCACGGCCAAAACACTACTAGT 60.549 50.000 2.24 0.00 0.00 2.57
881 931 3.056322 ACGGCCAAAACACTACTAGTAGG 60.056 47.826 29.05 20.83 37.49 3.18
890 1009 4.110072 ACACTACTAGTAGGAGACAGGGA 58.890 47.826 29.05 0.00 37.49 4.20
1004 1127 3.195698 GCCGCCGGACAAGATGAC 61.196 66.667 7.68 0.00 0.00 3.06
1044 1167 0.106868 TCTTCGGCTCCTCCATCGTA 60.107 55.000 0.00 0.00 34.01 3.43
1142 1266 5.477637 GCCCCGCCCTAACATTAATTAATTA 59.522 40.000 8.01 3.71 0.00 1.40
1194 1324 2.481289 TGCCGTGTGATGTAATTCCA 57.519 45.000 0.00 0.00 0.00 3.53
1210 1350 1.973281 CCAGGTGTGATTGCGGCTT 60.973 57.895 0.00 0.00 0.00 4.35
1228 1368 2.996621 GCTTACCTCACATCACACTCAC 59.003 50.000 0.00 0.00 0.00 3.51
1234 1374 3.315418 CTCACATCACACTCACACTCAG 58.685 50.000 0.00 0.00 0.00 3.35
1266 1416 7.559335 ACCTAACCTAGATGCATGATTATCA 57.441 36.000 2.46 0.00 0.00 2.15
1418 1610 8.723942 ATTAGTGTAAAATTCTAGCAGAGTGG 57.276 34.615 0.00 0.00 0.00 4.00
1492 1685 6.283694 TCCCTCTCGATTAATGTGAGATTTG 58.716 40.000 14.31 8.43 38.05 2.32
1505 1698 5.072055 TGTGAGATTTGCAGGATTTCTTGA 58.928 37.500 0.00 0.00 0.00 3.02
1749 1944 1.644295 CATAGCACGTATTCGCTAGCG 59.356 52.381 30.91 30.91 43.58 4.26
1982 2177 3.179443 GACTTGAGTCCACACTTGTCA 57.821 47.619 0.00 0.00 39.07 3.58
2441 2636 4.711980 GTCATAGAGACGTGCCGG 57.288 61.111 0.00 0.00 37.53 6.13
2442 2637 1.065928 GTCATAGAGACGTGCCGGG 59.934 63.158 2.18 0.00 37.53 5.73
2444 2639 0.467474 TCATAGAGACGTGCCGGGAT 60.467 55.000 2.18 0.00 0.00 3.85
2445 2640 0.319040 CATAGAGACGTGCCGGGATG 60.319 60.000 14.42 14.42 0.00 3.51
2446 2641 2.088674 ATAGAGACGTGCCGGGATGC 62.089 60.000 16.03 8.24 0.00 3.91
2452 2647 4.856801 GTGCCGGGATGCGGTCAT 62.857 66.667 2.18 0.00 35.17 3.06
2453 2648 3.157949 TGCCGGGATGCGGTCATA 61.158 61.111 2.18 0.00 31.96 2.15
2455 2650 2.867855 GCCGGGATGCGGTCATAGA 61.868 63.158 2.18 0.00 31.96 1.98
2457 2652 1.179174 CCGGGATGCGGTCATAGAGA 61.179 60.000 0.00 0.00 31.96 3.10
2458 2653 0.039074 CGGGATGCGGTCATAGAGAC 60.039 60.000 0.00 0.00 46.83 3.36
2465 2660 2.353607 GTCATAGAGACGCGCCGG 60.354 66.667 5.73 0.00 37.53 6.13
2466 2661 3.592814 TCATAGAGACGCGCCGGG 61.593 66.667 5.73 0.00 0.00 5.73
2468 2663 2.597805 ATAGAGACGCGCCGGGAT 60.598 61.111 8.58 0.00 0.00 3.85
2479 4237 1.447643 GCCGGGATGCTGTCATAGT 59.552 57.895 2.18 0.00 31.96 2.12
2567 4325 3.331002 TGGCATTCTTACGTTGGCA 57.669 47.368 9.13 9.13 42.76 4.92
2783 4619 3.634397 CTCAAGGGCAATGAGGTTCTA 57.366 47.619 10.06 0.00 40.48 2.10
2860 4698 4.618227 GCTCGCAATTTGTTATCCAAGGTT 60.618 41.667 0.00 0.00 33.75 3.50
2902 4740 4.250305 ACCGACTGCCAAGCCGTT 62.250 61.111 0.00 0.00 0.00 4.44
3146 4984 3.364964 CCAAGTGAATTTTCTCCCGTTCG 60.365 47.826 0.00 0.00 0.00 3.95
3315 5153 4.051922 CGGATATCAACCAGCTCTTGTAC 58.948 47.826 4.83 0.00 0.00 2.90
3529 5373 8.970859 AATTCTCAAATCTATTACCCAGACAG 57.029 34.615 0.00 0.00 0.00 3.51
3530 5374 6.485830 TCTCAAATCTATTACCCAGACAGG 57.514 41.667 0.00 0.00 37.03 4.00
3531 5375 6.202331 TCTCAAATCTATTACCCAGACAGGA 58.798 40.000 0.00 0.00 41.22 3.86
3532 5376 6.846505 TCTCAAATCTATTACCCAGACAGGAT 59.153 38.462 0.00 0.00 41.22 3.24
3533 5377 7.348274 TCTCAAATCTATTACCCAGACAGGATT 59.652 37.037 0.00 0.00 41.22 3.01
3534 5378 7.872138 TCAAATCTATTACCCAGACAGGATTT 58.128 34.615 0.00 0.00 41.22 2.17
3535 5379 7.993183 TCAAATCTATTACCCAGACAGGATTTC 59.007 37.037 0.00 0.00 41.22 2.17
3536 5380 7.698163 AATCTATTACCCAGACAGGATTTCT 57.302 36.000 0.00 0.00 41.22 2.52
3537 5381 7.698163 ATCTATTACCCAGACAGGATTTCTT 57.302 36.000 0.00 0.00 41.22 2.52
3538 5382 6.889198 TCTATTACCCAGACAGGATTTCTTG 58.111 40.000 0.00 0.00 41.22 3.02
3558 5402 9.695526 TTTCTTGATTAATGTGTTCCTTGAATG 57.304 29.630 0.00 0.00 0.00 2.67
3579 5423 9.631257 TGAATGTCACTTGTTATTCATGGATAT 57.369 29.630 0.00 0.00 35.34 1.63
3682 5540 6.294843 GGATAGACCAAGCAAGTACTCCTATC 60.295 46.154 0.00 0.00 38.79 2.08
3768 5669 3.666883 TTTTACACAACACACTGAGCG 57.333 42.857 0.00 0.00 0.00 5.03
3783 5684 3.518303 ACTGAGCGGGATACTTTTAAGGT 59.482 43.478 0.00 0.00 0.00 3.50
3787 5688 4.035814 AGCGGGATACTTTTAAGGTAGGT 58.964 43.478 0.00 0.00 0.00 3.08
3797 5698 9.760077 ATACTTTTAAGGTAGGTTATGACATCG 57.240 33.333 0.00 0.00 0.00 3.84
3801 5702 8.851541 TTTAAGGTAGGTTATGACATCGTTTT 57.148 30.769 0.00 0.00 0.00 2.43
3932 5833 8.575649 ACCCGTTAATCAGAACATTTAGAATT 57.424 30.769 0.00 0.00 0.00 2.17
3994 5895 5.693814 AGAGCGAATGACAGTGAATTTTTC 58.306 37.500 0.00 0.00 0.00 2.29
4046 5947 1.134995 CGACAATAGGCTGAGTGCAGA 60.135 52.381 0.00 0.00 45.17 4.26
4079 5981 1.134310 TGCATGCTTGGATCGACTGAT 60.134 47.619 20.33 0.00 37.60 2.90
4094 5996 1.001020 TGATGGCCCTGAATGCGTT 60.001 52.632 0.00 0.00 0.00 4.84
4202 6105 5.354234 CGGGCTATTTTTACAGATTGTGTCT 59.646 40.000 0.00 0.00 40.94 3.41
4304 6208 8.160521 TCTTTTGACGGAAAATCAAATACTCA 57.839 30.769 1.32 0.00 43.65 3.41
4419 6323 6.017605 GGACACTATCATGAACCAATGCTAAG 60.018 42.308 0.00 0.00 0.00 2.18
4441 6345 2.426522 ACAATCCGGTTGACTGATGTG 58.573 47.619 19.38 0.39 40.37 3.21
4442 6346 2.224523 ACAATCCGGTTGACTGATGTGT 60.225 45.455 19.38 0.96 40.37 3.72
4443 6347 2.099141 ATCCGGTTGACTGATGTGTG 57.901 50.000 0.00 0.00 0.00 3.82
4444 6348 0.756294 TCCGGTTGACTGATGTGTGT 59.244 50.000 0.00 0.00 0.00 3.72
4445 6349 0.867746 CCGGTTGACTGATGTGTGTG 59.132 55.000 0.00 0.00 0.00 3.82
4464 6368 3.805422 TGTGTGTGTATTCAACTCGTTCC 59.195 43.478 0.00 0.00 0.00 3.62
4794 6702 0.607489 CAGTGCAGCCTAGCTTGGTT 60.607 55.000 15.85 6.92 36.40 3.67
4918 6826 2.061220 CACCTCAAGAGCCTGTCCA 58.939 57.895 0.00 0.00 0.00 4.02
4974 6882 0.392706 TCAACGAGGAGCTGCTCAAA 59.607 50.000 31.26 12.84 31.08 2.69
4995 6903 1.242076 AATCAACCAGCACTGCACTC 58.758 50.000 3.30 0.00 0.00 3.51
5239 7147 2.236395 CTCTGAATTTGTAGGGACGGGT 59.764 50.000 0.00 0.00 0.00 5.28
5502 7410 1.022451 ACGTGATATTTTGCGCCGGT 61.022 50.000 4.18 0.00 0.00 5.28
5578 7486 1.004161 TGAATTGCAAGGGTCCATCGA 59.996 47.619 4.94 0.00 0.00 3.59
5597 7505 8.027189 TCCATCGAGTCGTAGAATTAATAATGG 58.973 37.037 13.12 12.86 39.69 3.16
5617 7525 5.651387 TGGACATGTTTGAGTTGAACAAA 57.349 34.783 0.00 0.00 40.10 2.83
5627 7535 4.185394 TGAGTTGAACAAACGTTGAGCTA 58.815 39.130 0.00 0.00 44.04 3.32
5635 7543 1.892209 AACGTTGAGCTAAGTTGGGG 58.108 50.000 0.00 0.00 0.00 4.96
5763 7671 3.119173 TGGAATTTCGTGGCAATGGATTC 60.119 43.478 0.00 0.00 0.00 2.52
5880 7797 1.238439 CAAGGAACACCGTGCATTCT 58.762 50.000 0.00 0.00 0.00 2.40
5884 7801 3.270877 AGGAACACCGTGCATTCTATTC 58.729 45.455 0.00 0.00 0.00 1.75
5891 7808 3.871594 ACCGTGCATTCTATTCAACTAGC 59.128 43.478 0.00 0.00 0.00 3.42
5916 7833 2.822255 GCTAAATCGCCGGCCACA 60.822 61.111 23.46 5.14 0.00 4.17
5928 7845 1.240641 CGGCCACAGCACCAATTACA 61.241 55.000 2.24 0.00 42.56 2.41
5929 7846 1.185315 GGCCACAGCACCAATTACAT 58.815 50.000 0.00 0.00 42.56 2.29
5930 7847 1.134946 GGCCACAGCACCAATTACATC 59.865 52.381 0.00 0.00 42.56 3.06
5931 7848 1.818060 GCCACAGCACCAATTACATCA 59.182 47.619 0.00 0.00 39.53 3.07
5932 7849 2.159338 GCCACAGCACCAATTACATCAG 60.159 50.000 0.00 0.00 39.53 2.90
5933 7850 3.346315 CCACAGCACCAATTACATCAGA 58.654 45.455 0.00 0.00 0.00 3.27
5934 7851 3.376234 CCACAGCACCAATTACATCAGAG 59.624 47.826 0.00 0.00 0.00 3.35
5937 7854 1.678101 GCACCAATTACATCAGAGGGC 59.322 52.381 0.00 0.00 0.00 5.19
5938 7855 2.945440 GCACCAATTACATCAGAGGGCA 60.945 50.000 0.00 0.00 0.00 5.36
5940 7857 3.763360 CACCAATTACATCAGAGGGCAAA 59.237 43.478 0.00 0.00 0.00 3.68
5941 7858 4.403432 CACCAATTACATCAGAGGGCAAAT 59.597 41.667 0.00 0.00 0.00 2.32
5942 7859 4.646492 ACCAATTACATCAGAGGGCAAATC 59.354 41.667 0.00 0.00 0.00 2.17
5943 7860 4.646040 CCAATTACATCAGAGGGCAAATCA 59.354 41.667 0.00 0.00 0.00 2.57
5944 7861 5.221185 CCAATTACATCAGAGGGCAAATCAG 60.221 44.000 0.00 0.00 0.00 2.90
5945 7862 4.574674 TTACATCAGAGGGCAAATCAGT 57.425 40.909 0.00 0.00 0.00 3.41
5946 7863 2.719739 ACATCAGAGGGCAAATCAGTG 58.280 47.619 0.00 0.00 0.00 3.66
5947 7864 2.306805 ACATCAGAGGGCAAATCAGTGA 59.693 45.455 0.00 0.00 0.00 3.41
5948 7865 2.775911 TCAGAGGGCAAATCAGTGAG 57.224 50.000 0.00 0.00 0.00 3.51
5949 7866 1.093159 CAGAGGGCAAATCAGTGAGC 58.907 55.000 0.00 0.00 0.00 4.26
5950 7867 0.034670 AGAGGGCAAATCAGTGAGCC 60.035 55.000 12.39 12.39 46.28 4.70
5954 7871 2.070262 GGCAAATCAGTGAGCCAAAC 57.930 50.000 15.20 0.00 46.26 2.93
5955 7872 1.340889 GGCAAATCAGTGAGCCAAACA 59.659 47.619 15.20 0.00 46.26 2.83
5956 7873 2.608752 GGCAAATCAGTGAGCCAAACAG 60.609 50.000 15.20 0.00 46.26 3.16
5957 7874 2.669364 CAAATCAGTGAGCCAAACAGC 58.331 47.619 0.00 0.00 0.00 4.40
5958 7875 1.251251 AATCAGTGAGCCAAACAGCC 58.749 50.000 0.00 0.00 0.00 4.85
5959 7876 0.111061 ATCAGTGAGCCAAACAGCCA 59.889 50.000 0.00 0.00 0.00 4.75
5960 7877 0.819259 TCAGTGAGCCAAACAGCCAC 60.819 55.000 0.00 0.00 35.46 5.01
5961 7878 1.102809 CAGTGAGCCAAACAGCCACA 61.103 55.000 0.00 0.00 36.79 4.17
5962 7879 0.820891 AGTGAGCCAAACAGCCACAG 60.821 55.000 0.00 0.00 36.79 3.66
5963 7880 2.195567 TGAGCCAAACAGCCACAGC 61.196 57.895 0.00 0.00 40.32 4.40
5964 7881 2.123769 AGCCAAACAGCCACAGCA 60.124 55.556 0.00 0.00 43.56 4.41
5965 7882 2.028043 GCCAAACAGCCACAGCAC 59.972 61.111 0.00 0.00 43.56 4.40
5966 7883 2.730094 CCAAACAGCCACAGCACC 59.270 61.111 0.00 0.00 43.56 5.01
5967 7884 2.126596 CCAAACAGCCACAGCACCA 61.127 57.895 0.00 0.00 43.56 4.17
5968 7885 1.361271 CAAACAGCCACAGCACCAG 59.639 57.895 0.00 0.00 43.56 4.00
5969 7886 1.076777 AAACAGCCACAGCACCAGT 60.077 52.632 0.00 0.00 43.56 4.00
5970 7887 0.684153 AAACAGCCACAGCACCAGTT 60.684 50.000 0.00 0.00 43.56 3.16
5971 7888 0.182537 AACAGCCACAGCACCAGTTA 59.817 50.000 0.00 0.00 43.56 2.24
5972 7889 0.535102 ACAGCCACAGCACCAGTTAC 60.535 55.000 0.00 0.00 43.56 2.50
5973 7890 0.534877 CAGCCACAGCACCAGTTACA 60.535 55.000 0.00 0.00 43.56 2.41
5974 7891 0.401738 AGCCACAGCACCAGTTACAT 59.598 50.000 0.00 0.00 43.56 2.29
5975 7892 0.804989 GCCACAGCACCAGTTACATC 59.195 55.000 0.00 0.00 39.53 3.06
5976 7893 1.881925 GCCACAGCACCAGTTACATCA 60.882 52.381 0.00 0.00 39.53 3.07
5977 7894 2.079158 CCACAGCACCAGTTACATCAG 58.921 52.381 0.00 0.00 0.00 2.90
5978 7895 2.289631 CCACAGCACCAGTTACATCAGA 60.290 50.000 0.00 0.00 0.00 3.27
5979 7896 2.998670 CACAGCACCAGTTACATCAGAG 59.001 50.000 0.00 0.00 0.00 3.35
5980 7897 2.027745 ACAGCACCAGTTACATCAGAGG 60.028 50.000 0.00 0.00 0.00 3.69
5981 7898 1.556911 AGCACCAGTTACATCAGAGGG 59.443 52.381 0.00 0.00 0.00 4.30
5982 7899 2.014068 GCACCAGTTACATCAGAGGGC 61.014 57.143 0.00 0.00 0.00 5.19
5983 7900 1.278985 CACCAGTTACATCAGAGGGCA 59.721 52.381 0.00 0.00 0.00 5.36
5984 7901 1.985159 ACCAGTTACATCAGAGGGCAA 59.015 47.619 0.00 0.00 0.00 4.52
5985 7902 2.375174 ACCAGTTACATCAGAGGGCAAA 59.625 45.455 0.00 0.00 0.00 3.68
5986 7903 3.010584 ACCAGTTACATCAGAGGGCAAAT 59.989 43.478 0.00 0.00 0.00 2.32
5987 7904 3.629398 CCAGTTACATCAGAGGGCAAATC 59.371 47.826 0.00 0.00 0.00 2.17
5988 7905 4.264253 CAGTTACATCAGAGGGCAAATCA 58.736 43.478 0.00 0.00 0.00 2.57
5989 7906 4.701651 CAGTTACATCAGAGGGCAAATCAA 59.298 41.667 0.00 0.00 0.00 2.57
5990 7907 5.359009 CAGTTACATCAGAGGGCAAATCAAT 59.641 40.000 0.00 0.00 0.00 2.57
5991 7908 5.359009 AGTTACATCAGAGGGCAAATCAATG 59.641 40.000 0.00 0.00 0.00 2.82
5992 7909 3.972133 ACATCAGAGGGCAAATCAATGA 58.028 40.909 0.00 0.00 0.00 2.57
5993 7910 3.952323 ACATCAGAGGGCAAATCAATGAG 59.048 43.478 0.00 0.00 0.00 2.90
5994 7911 2.372264 TCAGAGGGCAAATCAATGAGC 58.628 47.619 0.00 0.00 0.00 4.26
5995 7912 1.407979 CAGAGGGCAAATCAATGAGCC 59.592 52.381 3.65 3.65 46.28 4.70
6000 7917 3.042871 GGCAAATCAATGAGCCAAACA 57.957 42.857 7.07 0.00 46.26 2.83
6001 7918 2.738314 GGCAAATCAATGAGCCAAACAC 59.262 45.455 7.07 0.00 46.26 3.32
6002 7919 2.409378 GCAAATCAATGAGCCAAACACG 59.591 45.455 0.00 0.00 0.00 4.49
6003 7920 3.641648 CAAATCAATGAGCCAAACACGT 58.358 40.909 0.00 0.00 0.00 4.49
6004 7921 4.050553 CAAATCAATGAGCCAAACACGTT 58.949 39.130 0.00 0.00 0.00 3.99
6005 7922 2.772568 TCAATGAGCCAAACACGTTG 57.227 45.000 0.00 0.00 37.25 4.10
6006 7923 2.293170 TCAATGAGCCAAACACGTTGA 58.707 42.857 0.00 0.00 40.98 3.18
6007 7924 2.032799 TCAATGAGCCAAACACGTTGAC 59.967 45.455 0.00 0.00 39.16 3.18
6008 7925 1.967319 ATGAGCCAAACACGTTGACT 58.033 45.000 0.00 0.00 39.87 3.41
6009 7926 1.745232 TGAGCCAAACACGTTGACTT 58.255 45.000 0.00 0.00 39.87 3.01
6010 7927 1.668751 TGAGCCAAACACGTTGACTTC 59.331 47.619 0.00 0.00 39.87 3.01
6011 7928 1.940613 GAGCCAAACACGTTGACTTCT 59.059 47.619 0.00 0.00 39.87 2.85
6012 7929 2.354821 GAGCCAAACACGTTGACTTCTT 59.645 45.455 0.00 0.00 39.87 2.52
6013 7930 2.097466 AGCCAAACACGTTGACTTCTTG 59.903 45.455 0.00 0.00 39.87 3.02
6014 7931 2.096819 GCCAAACACGTTGACTTCTTGA 59.903 45.455 0.00 0.00 39.87 3.02
6015 7932 3.243068 GCCAAACACGTTGACTTCTTGAT 60.243 43.478 0.00 0.00 39.87 2.57
6016 7933 4.733523 GCCAAACACGTTGACTTCTTGATT 60.734 41.667 0.00 0.00 39.87 2.57
6017 7934 4.970003 CCAAACACGTTGACTTCTTGATTC 59.030 41.667 0.00 0.00 39.87 2.52
6018 7935 5.448496 CCAAACACGTTGACTTCTTGATTCA 60.448 40.000 0.00 0.00 39.87 2.57
6019 7936 5.811399 AACACGTTGACTTCTTGATTCAA 57.189 34.783 0.00 0.00 0.00 2.69
6020 7937 6.377327 AACACGTTGACTTCTTGATTCAAT 57.623 33.333 0.00 0.00 30.79 2.57
6021 7938 5.990408 ACACGTTGACTTCTTGATTCAATC 58.010 37.500 0.00 0.00 30.79 2.67
6022 7939 5.049405 ACACGTTGACTTCTTGATTCAATCC 60.049 40.000 0.00 0.00 30.79 3.01
6023 7940 5.180117 CACGTTGACTTCTTGATTCAATCCT 59.820 40.000 0.00 0.00 30.79 3.24
6024 7941 5.409826 ACGTTGACTTCTTGATTCAATCCTC 59.590 40.000 0.00 0.00 30.79 3.71
6025 7942 5.445142 CGTTGACTTCTTGATTCAATCCTCG 60.445 44.000 0.00 0.00 30.79 4.63
6026 7943 3.935203 TGACTTCTTGATTCAATCCTCGC 59.065 43.478 0.00 0.00 0.00 5.03
6027 7944 3.935203 GACTTCTTGATTCAATCCTCGCA 59.065 43.478 0.00 0.00 0.00 5.10
6028 7945 3.686726 ACTTCTTGATTCAATCCTCGCAC 59.313 43.478 0.00 0.00 0.00 5.34
6029 7946 2.632377 TCTTGATTCAATCCTCGCACC 58.368 47.619 0.00 0.00 0.00 5.01
6030 7947 2.027285 TCTTGATTCAATCCTCGCACCA 60.027 45.455 0.00 0.00 0.00 4.17
6031 7948 2.715749 TGATTCAATCCTCGCACCAT 57.284 45.000 0.00 0.00 0.00 3.55
6032 7949 2.291365 TGATTCAATCCTCGCACCATG 58.709 47.619 0.00 0.00 0.00 3.66
6033 7950 1.002033 GATTCAATCCTCGCACCATGC 60.002 52.381 0.00 0.00 40.69 4.06
6054 7971 4.133856 CGTAGCTAATAAATGTGCAGGC 57.866 45.455 0.00 0.00 0.00 4.85
6055 7972 3.559655 CGTAGCTAATAAATGTGCAGGCA 59.440 43.478 0.00 0.00 0.00 4.75
6056 7973 4.552767 CGTAGCTAATAAATGTGCAGGCAC 60.553 45.833 17.11 17.11 46.33 5.01
6067 7984 2.867429 GTGCAGGCACATTACATTCAC 58.133 47.619 18.84 0.00 45.53 3.18
6068 7985 1.468127 TGCAGGCACATTACATTCACG 59.532 47.619 0.00 0.00 0.00 4.35
6069 7986 1.202177 GCAGGCACATTACATTCACGG 60.202 52.381 0.00 0.00 0.00 4.94
6070 7987 1.401552 CAGGCACATTACATTCACGGG 59.598 52.381 0.00 0.00 0.00 5.28
6071 7988 0.738389 GGCACATTACATTCACGGGG 59.262 55.000 0.00 0.00 0.00 5.73
6072 7989 1.680555 GGCACATTACATTCACGGGGA 60.681 52.381 0.00 0.00 0.00 4.81
6073 7990 2.297701 GCACATTACATTCACGGGGAT 58.702 47.619 0.00 0.00 0.00 3.85
6074 7991 2.687935 GCACATTACATTCACGGGGATT 59.312 45.455 0.00 0.00 0.00 3.01
6075 7992 3.489059 GCACATTACATTCACGGGGATTG 60.489 47.826 0.79 0.79 33.97 2.67
6076 7993 3.944650 CACATTACATTCACGGGGATTGA 59.055 43.478 8.98 0.00 32.50 2.57
6077 7994 4.397730 CACATTACATTCACGGGGATTGAA 59.602 41.667 8.98 0.00 37.38 2.69
6078 7995 4.398044 ACATTACATTCACGGGGATTGAAC 59.602 41.667 8.98 0.00 35.82 3.18
6079 7996 2.879103 ACATTCACGGGGATTGAACT 57.121 45.000 8.98 0.00 35.82 3.01
6080 7997 2.711542 ACATTCACGGGGATTGAACTC 58.288 47.619 8.98 0.00 35.82 3.01
6081 7998 2.039746 ACATTCACGGGGATTGAACTCA 59.960 45.455 8.98 0.00 35.82 3.41
6082 7999 2.940994 TTCACGGGGATTGAACTCAA 57.059 45.000 0.00 0.00 40.51 3.02
6083 8000 2.940994 TCACGGGGATTGAACTCAAA 57.059 45.000 0.00 0.00 39.55 2.69
6084 8001 2.500229 TCACGGGGATTGAACTCAAAC 58.500 47.619 0.00 0.00 39.55 2.93
6085 8002 1.539827 CACGGGGATTGAACTCAAACC 59.460 52.381 9.63 9.63 44.94 3.27
6086 8003 1.423921 ACGGGGATTGAACTCAAACCT 59.576 47.619 15.80 0.00 45.00 3.50
6087 8004 2.158519 ACGGGGATTGAACTCAAACCTT 60.159 45.455 15.80 2.74 45.00 3.50
6088 8005 2.228822 CGGGGATTGAACTCAAACCTTG 59.771 50.000 15.80 7.29 45.00 3.61
6089 8006 3.496331 GGGGATTGAACTCAAACCTTGA 58.504 45.455 15.80 0.00 45.00 3.02
6090 8007 4.089361 GGGGATTGAACTCAAACCTTGAT 58.911 43.478 15.80 0.00 45.00 2.57
6091 8008 4.082026 GGGGATTGAACTCAAACCTTGATG 60.082 45.833 15.80 0.00 45.00 3.07
6092 8009 4.488879 GGATTGAACTCAAACCTTGATGC 58.511 43.478 10.60 0.00 43.11 3.91
6093 8010 4.022068 GGATTGAACTCAAACCTTGATGCA 60.022 41.667 10.60 0.00 43.11 3.96
6094 8011 4.572985 TTGAACTCAAACCTTGATGCAG 57.427 40.909 0.00 0.00 39.30 4.41
6095 8012 2.294233 TGAACTCAAACCTTGATGCAGC 59.706 45.455 0.00 0.00 39.30 5.25
6096 8013 2.283145 ACTCAAACCTTGATGCAGCT 57.717 45.000 2.53 0.00 39.30 4.24
6097 8014 2.590821 ACTCAAACCTTGATGCAGCTT 58.409 42.857 2.53 0.00 39.30 3.74
6098 8015 2.295349 ACTCAAACCTTGATGCAGCTTG 59.705 45.455 2.53 0.00 39.30 4.01
6099 8016 1.614903 TCAAACCTTGATGCAGCTTGG 59.385 47.619 2.53 7.90 34.08 3.61
6100 8017 1.614903 CAAACCTTGATGCAGCTTGGA 59.385 47.619 17.90 0.00 0.00 3.53
6101 8018 1.542492 AACCTTGATGCAGCTTGGAG 58.458 50.000 17.90 4.89 0.00 3.86
6102 8019 0.964358 ACCTTGATGCAGCTTGGAGC 60.964 55.000 17.90 0.00 42.84 4.70
6171 8088 3.936203 GTGGGTGTCTCCACGGCA 61.936 66.667 0.00 0.00 46.31 5.69
6172 8089 3.625897 TGGGTGTCTCCACGGCAG 61.626 66.667 0.00 0.00 42.80 4.85
6174 8091 4.008933 GGTGTCTCCACGGCAGCT 62.009 66.667 0.00 0.00 42.80 4.24
6175 8092 2.031163 GTGTCTCCACGGCAGCTT 59.969 61.111 0.00 0.00 0.00 3.74
6176 8093 2.031012 TGTCTCCACGGCAGCTTG 59.969 61.111 0.00 0.00 0.00 4.01
6177 8094 2.743928 GTCTCCACGGCAGCTTGG 60.744 66.667 7.16 7.16 0.00 3.61
6178 8095 4.704833 TCTCCACGGCAGCTTGGC 62.705 66.667 8.38 0.00 39.85 4.52
6208 8125 4.166011 GCGTCGGCTGGCATGTTC 62.166 66.667 0.00 0.00 35.83 3.18
6209 8126 3.499737 CGTCGGCTGGCATGTTCC 61.500 66.667 0.00 0.00 0.00 3.62
6210 8127 3.499737 GTCGGCTGGCATGTTCCG 61.500 66.667 1.08 10.15 42.96 4.30
6211 8128 4.776322 TCGGCTGGCATGTTCCGG 62.776 66.667 14.50 0.00 41.98 5.14
6215 8132 3.499737 CTGGCATGTTCCGGCGTC 61.500 66.667 6.01 0.00 0.00 5.19
6247 8164 3.423154 CGGCTTGTGTCGGCCTTC 61.423 66.667 0.00 0.00 45.57 3.46
6248 8165 3.423154 GGCTTGTGTCGGCCTTCG 61.423 66.667 0.00 0.00 44.48 3.79
6249 8166 2.357034 GCTTGTGTCGGCCTTCGA 60.357 61.111 0.00 0.00 46.77 3.71
6256 8173 2.279073 TCGGCCTTCGATCCCTCT 59.721 61.111 0.00 0.00 43.74 3.69
6257 8174 1.828660 TCGGCCTTCGATCCCTCTC 60.829 63.158 0.00 0.00 43.74 3.20
6258 8175 2.862223 CGGCCTTCGATCCCTCTCC 61.862 68.421 0.00 0.00 42.43 3.71
6259 8176 1.458588 GGCCTTCGATCCCTCTCCT 60.459 63.158 0.00 0.00 0.00 3.69
6260 8177 1.051556 GGCCTTCGATCCCTCTCCTT 61.052 60.000 0.00 0.00 0.00 3.36
6261 8178 0.105778 GCCTTCGATCCCTCTCCTTG 59.894 60.000 0.00 0.00 0.00 3.61
6262 8179 1.490574 CCTTCGATCCCTCTCCTTGT 58.509 55.000 0.00 0.00 0.00 3.16
6263 8180 1.410882 CCTTCGATCCCTCTCCTTGTC 59.589 57.143 0.00 0.00 0.00 3.18
6264 8181 1.066303 CTTCGATCCCTCTCCTTGTCG 59.934 57.143 0.00 0.00 0.00 4.35
6265 8182 0.034380 TCGATCCCTCTCCTTGTCGT 60.034 55.000 0.00 0.00 0.00 4.34
6266 8183 0.101399 CGATCCCTCTCCTTGTCGTG 59.899 60.000 0.00 0.00 0.00 4.35
6267 8184 1.187087 GATCCCTCTCCTTGTCGTGT 58.813 55.000 0.00 0.00 0.00 4.49
6268 8185 0.898320 ATCCCTCTCCTTGTCGTGTG 59.102 55.000 0.00 0.00 0.00 3.82
6269 8186 1.185618 TCCCTCTCCTTGTCGTGTGG 61.186 60.000 0.00 0.00 0.00 4.17
6270 8187 1.293498 CCTCTCCTTGTCGTGTGGG 59.707 63.158 0.00 0.00 0.00 4.61
6271 8188 1.374758 CTCTCCTTGTCGTGTGGGC 60.375 63.158 0.00 0.00 0.00 5.36
6272 8189 2.738521 CTCCTTGTCGTGTGGGCG 60.739 66.667 0.00 0.00 0.00 6.13
6273 8190 4.980805 TCCTTGTCGTGTGGGCGC 62.981 66.667 0.00 0.00 0.00 6.53
6274 8191 4.988598 CCTTGTCGTGTGGGCGCT 62.989 66.667 7.64 0.00 0.00 5.92
6275 8192 2.048597 CTTGTCGTGTGGGCGCTA 60.049 61.111 7.64 0.00 0.00 4.26
6276 8193 2.356553 TTGTCGTGTGGGCGCTAC 60.357 61.111 7.64 7.95 0.00 3.58
6277 8194 2.765250 CTTGTCGTGTGGGCGCTACT 62.765 60.000 7.64 0.00 0.00 2.57
6278 8195 2.048503 GTCGTGTGGGCGCTACTT 60.049 61.111 7.64 0.00 0.00 2.24
6279 8196 1.666872 GTCGTGTGGGCGCTACTTT 60.667 57.895 7.64 0.00 0.00 2.66
6280 8197 1.373748 TCGTGTGGGCGCTACTTTC 60.374 57.895 7.64 2.23 0.00 2.62
6281 8198 2.726691 CGTGTGGGCGCTACTTTCG 61.727 63.158 7.64 9.82 0.00 3.46
6282 8199 1.666872 GTGTGGGCGCTACTTTCGT 60.667 57.895 7.64 0.00 0.00 3.85
6283 8200 1.373748 TGTGGGCGCTACTTTCGTC 60.374 57.895 7.64 0.00 0.00 4.20
6284 8201 2.126228 TGGGCGCTACTTTCGTCG 60.126 61.111 7.64 0.00 31.46 5.12
6285 8202 2.180017 GGGCGCTACTTTCGTCGA 59.820 61.111 7.64 0.00 31.46 4.20
6286 8203 1.444895 GGGCGCTACTTTCGTCGAA 60.445 57.895 7.64 2.90 31.46 3.71
6287 8204 1.411493 GGGCGCTACTTTCGTCGAAG 61.411 60.000 7.64 5.47 31.46 3.79
6288 8205 1.411493 GGCGCTACTTTCGTCGAAGG 61.411 60.000 14.85 14.85 0.00 3.46
6289 8206 1.411493 GCGCTACTTTCGTCGAAGGG 61.411 60.000 19.69 12.08 0.00 3.95
6290 8207 0.109412 CGCTACTTTCGTCGAAGGGT 60.109 55.000 19.69 17.64 0.00 4.34
6291 8208 1.668047 CGCTACTTTCGTCGAAGGGTT 60.668 52.381 19.69 4.08 0.00 4.11
6292 8209 1.725164 GCTACTTTCGTCGAAGGGTTG 59.275 52.381 19.69 16.79 0.00 3.77
6293 8210 2.334838 CTACTTTCGTCGAAGGGTTGG 58.665 52.381 19.69 10.13 0.00 3.77
6294 8211 0.883370 ACTTTCGTCGAAGGGTTGGC 60.883 55.000 19.69 0.00 0.00 4.52
6295 8212 1.574702 CTTTCGTCGAAGGGTTGGCC 61.575 60.000 9.11 0.00 0.00 5.36
6305 8222 3.171348 GGTTGGCCCTCTTCCAGT 58.829 61.111 0.00 0.00 34.66 4.00
6306 8223 1.460699 GGTTGGCCCTCTTCCAGTT 59.539 57.895 0.00 0.00 34.66 3.16
6307 8224 0.895559 GGTTGGCCCTCTTCCAGTTG 60.896 60.000 0.00 0.00 34.66 3.16
6308 8225 0.178990 GTTGGCCCTCTTCCAGTTGT 60.179 55.000 0.00 0.00 34.66 3.32
6309 8226 0.178992 TTGGCCCTCTTCCAGTTGTG 60.179 55.000 0.00 0.00 34.66 3.33
6310 8227 1.303643 GGCCCTCTTCCAGTTGTGG 60.304 63.158 0.00 0.00 46.63 4.17
6311 8228 1.456287 GCCCTCTTCCAGTTGTGGT 59.544 57.895 0.00 0.00 45.28 4.16
6312 8229 0.606673 GCCCTCTTCCAGTTGTGGTC 60.607 60.000 0.00 0.00 45.28 4.02
6313 8230 0.036875 CCCTCTTCCAGTTGTGGTCC 59.963 60.000 0.00 0.00 45.28 4.46
6314 8231 0.764890 CCTCTTCCAGTTGTGGTCCA 59.235 55.000 0.00 0.00 45.28 4.02
6315 8232 1.352352 CCTCTTCCAGTTGTGGTCCAT 59.648 52.381 0.00 0.00 45.28 3.41
6316 8233 2.616510 CCTCTTCCAGTTGTGGTCCATC 60.617 54.545 0.00 0.00 45.28 3.51
6317 8234 1.001974 TCTTCCAGTTGTGGTCCATCG 59.998 52.381 0.00 0.00 45.28 3.84
6318 8235 0.605319 TTCCAGTTGTGGTCCATCGC 60.605 55.000 0.00 0.00 45.28 4.58
6319 8236 1.003355 CCAGTTGTGGTCCATCGCT 60.003 57.895 0.00 0.00 39.30 4.93
6320 8237 1.021390 CCAGTTGTGGTCCATCGCTC 61.021 60.000 0.00 0.00 39.30 5.03
6321 8238 1.079819 AGTTGTGGTCCATCGCTCG 60.080 57.895 0.00 0.00 0.00 5.03
6322 8239 1.374252 GTTGTGGTCCATCGCTCGT 60.374 57.895 0.00 0.00 0.00 4.18
6323 8240 0.949105 GTTGTGGTCCATCGCTCGTT 60.949 55.000 0.00 0.00 0.00 3.85
6324 8241 0.669318 TTGTGGTCCATCGCTCGTTC 60.669 55.000 0.00 0.00 0.00 3.95
6325 8242 2.158959 GTGGTCCATCGCTCGTTCG 61.159 63.158 0.00 0.00 0.00 3.95
6326 8243 3.255379 GGTCCATCGCTCGTTCGC 61.255 66.667 0.00 0.00 0.00 4.70
6335 8252 4.695231 CTCGTTCGCGTCCGGTGT 62.695 66.667 17.23 0.00 42.11 4.16
6336 8253 4.268939 TCGTTCGCGTCCGGTGTT 62.269 61.111 17.23 0.00 42.11 3.32
6337 8254 4.054455 CGTTCGCGTCCGGTGTTG 62.054 66.667 5.77 0.00 35.57 3.33
6338 8255 4.364409 GTTCGCGTCCGGTGTTGC 62.364 66.667 5.77 0.15 34.56 4.17
6339 8256 4.893601 TTCGCGTCCGGTGTTGCA 62.894 61.111 5.77 0.00 34.56 4.08
6342 8259 4.980805 GCGTCCGGTGTTGCAGGA 62.981 66.667 0.00 0.00 39.15 3.86
6345 8262 2.425592 TCCGGTGTTGCAGGACTG 59.574 61.111 0.00 0.00 36.53 3.51
6346 8263 2.137528 TCCGGTGTTGCAGGACTGA 61.138 57.895 0.00 0.00 36.53 3.41
6347 8264 1.669115 CCGGTGTTGCAGGACTGAG 60.669 63.158 3.00 0.00 34.10 3.35
6348 8265 2.320587 CGGTGTTGCAGGACTGAGC 61.321 63.158 3.00 0.00 0.00 4.26
6349 8266 1.072159 GGTGTTGCAGGACTGAGCT 59.928 57.895 3.00 0.00 0.00 4.09
6350 8267 0.952984 GGTGTTGCAGGACTGAGCTC 60.953 60.000 6.82 6.82 0.00 4.09
6351 8268 1.005748 TGTTGCAGGACTGAGCTCG 60.006 57.895 9.64 6.63 0.00 5.03
6352 8269 1.005630 GTTGCAGGACTGAGCTCGT 60.006 57.895 9.64 10.04 0.00 4.18
6353 8270 1.011451 GTTGCAGGACTGAGCTCGTC 61.011 60.000 22.44 22.44 0.00 4.20
6354 8271 1.181741 TTGCAGGACTGAGCTCGTCT 61.182 55.000 26.46 15.94 0.00 4.18
6355 8272 1.138671 GCAGGACTGAGCTCGTCTC 59.861 63.158 26.46 19.79 42.23 3.36
6356 8273 1.427419 CAGGACTGAGCTCGTCTCG 59.573 63.158 26.46 18.33 44.86 4.04
6357 8274 2.101380 GGACTGAGCTCGTCTCGC 59.899 66.667 26.46 14.07 44.86 5.03
6358 8275 2.276994 GACTGAGCTCGTCTCGCG 60.277 66.667 22.93 0.00 44.86 5.87
6359 8276 4.468615 ACTGAGCTCGTCTCGCGC 62.469 66.667 9.64 0.00 44.86 6.86
6368 8285 4.129737 GTCTCGCGCCTGGCAGTA 62.130 66.667 20.29 1.38 43.84 2.74
6369 8286 3.826754 TCTCGCGCCTGGCAGTAG 61.827 66.667 20.29 11.77 43.84 2.57
6370 8287 4.880537 CTCGCGCCTGGCAGTAGG 62.881 72.222 20.29 2.53 43.84 3.18
6372 8289 4.451150 CGCGCCTGGCAGTAGGAA 62.451 66.667 20.29 0.00 43.84 3.36
6373 8290 2.190578 GCGCCTGGCAGTAGGAAT 59.809 61.111 20.29 0.00 40.42 3.01
6374 8291 2.182842 GCGCCTGGCAGTAGGAATG 61.183 63.158 20.29 0.00 40.42 2.67
6375 8292 1.524621 CGCCTGGCAGTAGGAATGG 60.525 63.158 20.29 0.00 40.42 3.16
6376 8293 1.609783 GCCTGGCAGTAGGAATGGT 59.390 57.895 15.17 0.00 40.42 3.55
6377 8294 0.464554 GCCTGGCAGTAGGAATGGTC 60.465 60.000 15.17 0.00 40.42 4.02
6378 8295 0.911769 CCTGGCAGTAGGAATGGTCA 59.088 55.000 14.43 0.00 40.42 4.02
6379 8296 1.281867 CCTGGCAGTAGGAATGGTCAA 59.718 52.381 14.43 0.00 40.42 3.18
6380 8297 2.092212 CCTGGCAGTAGGAATGGTCAAT 60.092 50.000 14.43 0.00 40.42 2.57
6381 8298 2.947652 CTGGCAGTAGGAATGGTCAATG 59.052 50.000 6.28 0.00 0.00 2.82
6382 8299 2.301346 GGCAGTAGGAATGGTCAATGG 58.699 52.381 0.00 0.00 0.00 3.16
6383 8300 2.092429 GGCAGTAGGAATGGTCAATGGA 60.092 50.000 0.00 0.00 0.00 3.41
6384 8301 3.209410 GCAGTAGGAATGGTCAATGGAG 58.791 50.000 0.00 0.00 0.00 3.86
6385 8302 3.813443 CAGTAGGAATGGTCAATGGAGG 58.187 50.000 0.00 0.00 0.00 4.30
6386 8303 2.173569 AGTAGGAATGGTCAATGGAGGC 59.826 50.000 0.00 0.00 0.00 4.70
6387 8304 0.259938 AGGAATGGTCAATGGAGGCC 59.740 55.000 0.00 0.00 0.00 5.19
6388 8305 1.103398 GGAATGGTCAATGGAGGCCG 61.103 60.000 0.00 0.00 0.00 6.13
6389 8306 1.076777 AATGGTCAATGGAGGCCGG 60.077 57.895 0.00 0.00 0.00 6.13
6390 8307 1.863155 AATGGTCAATGGAGGCCGGT 61.863 55.000 1.90 0.00 0.00 5.28
6391 8308 1.863155 ATGGTCAATGGAGGCCGGTT 61.863 55.000 1.90 0.00 0.00 4.44
6392 8309 1.304134 GGTCAATGGAGGCCGGTTT 60.304 57.895 1.90 0.00 0.00 3.27
6393 8310 0.898326 GGTCAATGGAGGCCGGTTTT 60.898 55.000 1.90 0.00 0.00 2.43
6394 8311 0.243636 GTCAATGGAGGCCGGTTTTG 59.756 55.000 1.90 0.85 0.00 2.44
6395 8312 0.897863 TCAATGGAGGCCGGTTTTGG 60.898 55.000 1.90 0.00 0.00 3.28
6406 8323 3.282557 GGTTTTGGCCGACCTTTTG 57.717 52.632 13.82 0.00 36.63 2.44
6408 8325 0.249699 GTTTTGGCCGACCTTTTGGG 60.250 55.000 0.00 0.00 46.08 4.12
6419 8336 4.589675 TTTTGGGTCCCCGCGCTT 62.590 61.111 5.13 0.00 39.42 4.68
6442 8359 4.740822 CCCCAGGGGTGCGAAAGG 62.741 72.222 18.09 0.00 38.25 3.11
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 0.035439 ACATGAATCACACGACCCCC 60.035 55.000 0.00 0.00 0.00 5.40
10 11 2.277084 GTACATGAATCACACGACCCC 58.723 52.381 0.00 0.00 0.00 4.95
11 12 1.924524 CGTACATGAATCACACGACCC 59.075 52.381 0.00 0.00 34.66 4.46
12 13 1.924524 CCGTACATGAATCACACGACC 59.075 52.381 13.24 0.00 34.66 4.79
13 14 1.924524 CCCGTACATGAATCACACGAC 59.075 52.381 13.24 0.00 34.66 4.34
14 15 1.737696 GCCCGTACATGAATCACACGA 60.738 52.381 13.24 0.00 34.66 4.35
15 16 0.650512 GCCCGTACATGAATCACACG 59.349 55.000 0.00 6.83 0.00 4.49
16 17 2.024176 AGCCCGTACATGAATCACAC 57.976 50.000 0.00 0.00 0.00 3.82
17 18 3.897141 TTAGCCCGTACATGAATCACA 57.103 42.857 0.00 0.00 0.00 3.58
18 19 6.563381 CGTTTATTAGCCCGTACATGAATCAC 60.563 42.308 0.00 0.00 0.00 3.06
19 20 5.464057 CGTTTATTAGCCCGTACATGAATCA 59.536 40.000 0.00 0.00 0.00 2.57
20 21 5.614013 GCGTTTATTAGCCCGTACATGAATC 60.614 44.000 0.00 0.00 0.00 2.52
21 22 4.212636 GCGTTTATTAGCCCGTACATGAAT 59.787 41.667 0.00 0.00 0.00 2.57
22 23 3.556775 GCGTTTATTAGCCCGTACATGAA 59.443 43.478 0.00 0.00 0.00 2.57
23 24 3.125316 GCGTTTATTAGCCCGTACATGA 58.875 45.455 0.00 0.00 0.00 3.07
24 25 2.867368 TGCGTTTATTAGCCCGTACATG 59.133 45.455 0.00 0.00 0.00 3.21
25 26 3.182341 TGCGTTTATTAGCCCGTACAT 57.818 42.857 0.00 0.00 0.00 2.29
26 27 2.669300 TGCGTTTATTAGCCCGTACA 57.331 45.000 0.00 0.00 0.00 2.90
27 28 3.189285 TCTTGCGTTTATTAGCCCGTAC 58.811 45.455 0.00 0.00 0.00 3.67
28 29 3.523606 TCTTGCGTTTATTAGCCCGTA 57.476 42.857 0.00 0.00 0.00 4.02
29 30 2.389962 TCTTGCGTTTATTAGCCCGT 57.610 45.000 0.00 0.00 0.00 5.28
30 31 2.032030 CCATCTTGCGTTTATTAGCCCG 60.032 50.000 0.00 0.00 0.00 6.13
31 32 3.211045 TCCATCTTGCGTTTATTAGCCC 58.789 45.455 0.00 0.00 0.00 5.19
32 33 3.251004 CCTCCATCTTGCGTTTATTAGCC 59.749 47.826 0.00 0.00 0.00 3.93
33 34 4.127171 TCCTCCATCTTGCGTTTATTAGC 58.873 43.478 0.00 0.00 0.00 3.09
34 35 6.238484 CCTTTCCTCCATCTTGCGTTTATTAG 60.238 42.308 0.00 0.00 0.00 1.73
35 36 5.588648 CCTTTCCTCCATCTTGCGTTTATTA 59.411 40.000 0.00 0.00 0.00 0.98
36 37 4.399303 CCTTTCCTCCATCTTGCGTTTATT 59.601 41.667 0.00 0.00 0.00 1.40
37 38 3.947834 CCTTTCCTCCATCTTGCGTTTAT 59.052 43.478 0.00 0.00 0.00 1.40
38 39 3.244770 ACCTTTCCTCCATCTTGCGTTTA 60.245 43.478 0.00 0.00 0.00 2.01
39 40 2.162681 CCTTTCCTCCATCTTGCGTTT 58.837 47.619 0.00 0.00 0.00 3.60
40 41 1.073923 ACCTTTCCTCCATCTTGCGTT 59.926 47.619 0.00 0.00 0.00 4.84
41 42 0.693049 ACCTTTCCTCCATCTTGCGT 59.307 50.000 0.00 0.00 0.00 5.24
42 43 1.089920 CACCTTTCCTCCATCTTGCG 58.910 55.000 0.00 0.00 0.00 4.85
43 44 0.813821 GCACCTTTCCTCCATCTTGC 59.186 55.000 0.00 0.00 0.00 4.01
145 148 4.458397 GCCCCTCTGGTATTTTAGGTTAC 58.542 47.826 0.00 0.00 36.04 2.50
147 150 2.243994 GGCCCCTCTGGTATTTTAGGTT 59.756 50.000 0.00 0.00 36.04 3.50
151 154 1.882308 TCGGCCCCTCTGGTATTTTA 58.118 50.000 0.00 0.00 36.04 1.52
158 161 3.146847 GTTTATTTATCGGCCCCTCTGG 58.853 50.000 0.00 0.00 37.09 3.86
159 162 3.146847 GGTTTATTTATCGGCCCCTCTG 58.853 50.000 0.00 0.00 0.00 3.35
164 167 3.146847 CTCTGGGTTTATTTATCGGCCC 58.853 50.000 0.00 0.00 36.73 5.80
169 172 8.794335 ACTTTCTCACTCTGGGTTTATTTATC 57.206 34.615 0.00 0.00 0.00 1.75
175 178 5.152934 ACCTACTTTCTCACTCTGGGTTTA 58.847 41.667 0.00 0.00 0.00 2.01
176 179 3.974642 ACCTACTTTCTCACTCTGGGTTT 59.025 43.478 0.00 0.00 0.00 3.27
177 180 3.588569 ACCTACTTTCTCACTCTGGGTT 58.411 45.455 0.00 0.00 0.00 4.11
179 182 5.941555 AATACCTACTTTCTCACTCTGGG 57.058 43.478 0.00 0.00 0.00 4.45
180 183 6.702329 ACAAATACCTACTTTCTCACTCTGG 58.298 40.000 0.00 0.00 0.00 3.86
182 185 8.418597 TGTACAAATACCTACTTTCTCACTCT 57.581 34.615 0.00 0.00 0.00 3.24
183 186 8.923683 GTTGTACAAATACCTACTTTCTCACTC 58.076 37.037 10.51 0.00 0.00 3.51
184 187 7.876582 GGTTGTACAAATACCTACTTTCTCACT 59.123 37.037 10.51 0.00 0.00 3.41
185 188 7.148689 CGGTTGTACAAATACCTACTTTCTCAC 60.149 40.741 10.51 0.00 0.00 3.51
236 239 0.322997 TAGAAATGGCACCCAACCCG 60.323 55.000 0.00 0.00 36.95 5.28
242 245 8.919777 ATTTAGTATTACTAGAAATGGCACCC 57.080 34.615 0.00 0.00 31.47 4.61
275 280 3.313526 ACAGCTTTGAGTGTTTGCTACAG 59.686 43.478 0.00 0.00 37.45 2.74
288 293 3.838120 CATCTGACGACTACAGCTTTGA 58.162 45.455 0.00 0.00 35.61 2.69
341 346 4.745125 TCTCTCGTAATTCATTGATTCCGC 59.255 41.667 0.00 0.00 0.00 5.54
342 347 5.980116 ACTCTCTCGTAATTCATTGATTCCG 59.020 40.000 0.00 0.00 0.00 4.30
378 383 2.692368 TGCCTCCTCCCACCATCC 60.692 66.667 0.00 0.00 0.00 3.51
428 433 2.404693 CCATTCAATTGCGAAACACACG 59.595 45.455 0.00 0.00 0.00 4.49
429 434 3.182173 CACCATTCAATTGCGAAACACAC 59.818 43.478 0.00 0.00 0.00 3.82
589 601 3.702330 CCATACGTGCTTTCGATCAGTA 58.298 45.455 0.00 0.00 34.70 2.74
606 649 2.628178 CCTCTCTAACGTGATGGCCATA 59.372 50.000 20.84 4.38 0.00 2.74
653 699 4.318021 CCACTGCAGTGCGTGTGC 62.318 66.667 36.38 0.00 44.34 4.57
654 700 2.885676 GACCACTGCAGTGCGTGTG 61.886 63.158 36.38 25.52 44.34 3.82
655 701 2.588877 GACCACTGCAGTGCGTGT 60.589 61.111 36.38 28.94 44.34 4.49
681 727 4.166919 CCTCCCTAATAATCCCATCCCATC 59.833 50.000 0.00 0.00 0.00 3.51
705 751 3.855689 ATCAAAAACTCTGATTGGCGG 57.144 42.857 0.00 0.00 28.91 6.13
715 761 2.231235 ACCATGCCCGAATCAAAAACTC 59.769 45.455 0.00 0.00 0.00 3.01
724 770 4.839706 GGCCCACCATGCCCGAAT 62.840 66.667 0.00 0.00 43.33 3.34
821 868 0.686441 TAGTAGTGCCGGTGGAGCAT 60.686 55.000 1.90 0.00 43.29 3.79
854 904 0.887387 TAGTGTTTTGGCCGTGGAGC 60.887 55.000 0.00 0.00 0.00 4.70
857 907 2.073816 CTAGTAGTGTTTTGGCCGTGG 58.926 52.381 0.00 0.00 0.00 4.94
858 908 2.762745 ACTAGTAGTGTTTTGGCCGTG 58.237 47.619 0.85 0.00 0.00 4.94
859 909 3.056322 CCTACTAGTAGTGTTTTGGCCGT 60.056 47.826 24.84 0.00 0.00 5.68
860 910 3.194116 TCCTACTAGTAGTGTTTTGGCCG 59.806 47.826 24.84 8.67 0.00 6.13
861 911 4.465305 TCTCCTACTAGTAGTGTTTTGGCC 59.535 45.833 24.84 0.00 0.00 5.36
864 914 6.350277 CCCTGTCTCCTACTAGTAGTGTTTTG 60.350 46.154 24.84 11.18 0.00 2.44
865 915 5.715753 CCCTGTCTCCTACTAGTAGTGTTTT 59.284 44.000 24.84 0.00 0.00 2.43
866 916 5.014966 TCCCTGTCTCCTACTAGTAGTGTTT 59.985 44.000 24.84 0.00 0.00 2.83
868 918 4.110072 TCCCTGTCTCCTACTAGTAGTGT 58.890 47.826 24.84 0.00 0.00 3.55
869 919 4.445162 CCTCCCTGTCTCCTACTAGTAGTG 60.445 54.167 24.84 17.80 0.00 2.74
872 922 3.054576 CCCTCCCTGTCTCCTACTAGTA 58.945 54.545 1.89 1.89 0.00 1.82
875 925 2.136863 CTCCCTCCCTGTCTCCTACTA 58.863 57.143 0.00 0.00 0.00 1.82
878 928 1.950748 GCCTCCCTCCCTGTCTCCTA 61.951 65.000 0.00 0.00 0.00 2.94
881 931 2.766229 GGCCTCCCTCCCTGTCTC 60.766 72.222 0.00 0.00 0.00 3.36
901 1020 4.378046 CCGGAAAGAAACAATTAGACGGTG 60.378 45.833 0.00 0.00 33.48 4.94
905 1028 3.425758 CGGCCGGAAAGAAACAATTAGAC 60.426 47.826 20.10 0.00 0.00 2.59
909 1032 1.268625 GACGGCCGGAAAGAAACAATT 59.731 47.619 31.76 2.16 0.00 2.32
962 1085 1.273887 GCGGCTGTTGATTCGATCG 59.726 57.895 9.36 9.36 0.00 3.69
1044 1167 1.502231 CGTTGCTGAAGCTGTACTGT 58.498 50.000 3.61 0.00 42.66 3.55
1077 1200 1.815421 GTAGACGTCGGCGAGGGTA 60.815 63.158 29.90 19.07 42.00 3.69
1142 1266 6.126156 GGTAAAGAGAAATTAAGGGGAGGGAT 60.126 42.308 0.00 0.00 0.00 3.85
1194 1324 0.676782 GGTAAGCCGCAATCACACCT 60.677 55.000 0.00 0.00 0.00 4.00
1210 1350 3.230976 AGTGTGAGTGTGATGTGAGGTA 58.769 45.455 0.00 0.00 0.00 3.08
1228 1368 3.193691 AGGTTAGGTCGAATGACTGAGTG 59.806 47.826 0.00 0.00 44.83 3.51
1234 1374 4.202121 TGCATCTAGGTTAGGTCGAATGAC 60.202 45.833 0.00 0.00 44.72 3.06
1266 1416 4.807443 CAGATGCATATGACGAGTGATCT 58.193 43.478 16.35 0.00 0.00 2.75
1418 1610 3.527427 GCGCAAATGGTAGGGGGC 61.527 66.667 0.30 0.00 0.00 5.80
1469 1662 5.049818 GCAAATCTCACATTAATCGAGAGGG 60.050 44.000 15.75 10.44 39.07 4.30
1664 1859 0.599728 CATCGAGGCAGCTCTAAGGC 60.600 60.000 0.00 0.00 0.00 4.35
1749 1944 5.765182 TCTTGGAGACTTGTTGAGGAAAATC 59.235 40.000 0.00 0.00 0.00 2.17
1982 2177 0.529773 TCTGCACTGCGTTTTCGTCT 60.530 50.000 0.00 0.00 46.03 4.18
2441 2636 0.664767 GCGTCTCTATGACCGCATCC 60.665 60.000 0.00 0.00 42.49 3.51
2442 2637 0.999228 CGCGTCTCTATGACCGCATC 60.999 60.000 0.00 0.00 42.49 3.91
2444 2639 2.407616 CGCGTCTCTATGACCGCA 59.592 61.111 0.00 0.00 42.49 5.69
2446 2641 2.353607 GGCGCGTCTCTATGACCG 60.354 66.667 8.43 0.00 42.49 4.79
2447 2642 2.353607 CGGCGCGTCTCTATGACC 60.354 66.667 9.90 0.00 42.49 4.02
2448 2643 2.353607 CCGGCGCGTCTCTATGAC 60.354 66.667 9.90 0.00 42.06 3.06
2450 2645 2.920645 ATCCCGGCGCGTCTCTATG 61.921 63.158 9.90 0.00 0.00 2.23
2451 2646 2.597805 ATCCCGGCGCGTCTCTAT 60.598 61.111 9.90 0.00 0.00 1.98
2452 2647 3.592814 CATCCCGGCGCGTCTCTA 61.593 66.667 9.90 0.00 0.00 2.43
2459 2654 3.807631 TATGACAGCATCCCGGCGC 62.808 63.158 0.00 0.00 39.27 6.53
2460 2655 1.665916 CTATGACAGCATCCCGGCG 60.666 63.158 0.00 0.00 39.27 6.46
2461 2656 0.679505 TACTATGACAGCATCCCGGC 59.320 55.000 0.00 0.00 35.94 6.13
2464 2659 2.623889 ACGAGTACTATGACAGCATCCC 59.376 50.000 0.00 0.00 35.94 3.85
2465 2660 3.566322 AGACGAGTACTATGACAGCATCC 59.434 47.826 0.00 0.00 35.94 3.51
2466 2661 4.822036 AGACGAGTACTATGACAGCATC 57.178 45.455 0.00 0.00 35.94 3.91
2468 2663 3.875727 GGTAGACGAGTACTATGACAGCA 59.124 47.826 0.00 0.00 0.00 4.41
2567 4325 0.107508 CCATCGTCAGGCCTGTCATT 60.108 55.000 31.58 13.62 0.00 2.57
2783 4619 2.555227 GGTGGTGGAAATGTCAGGATGT 60.555 50.000 0.00 0.00 37.40 3.06
2860 4698 2.224281 CCTGCACGATAATGCCTTCCTA 60.224 50.000 0.00 0.00 45.50 2.94
3315 5153 3.001395 ACGAGGATAAGATCGCTTTCG 57.999 47.619 0.00 0.00 42.61 3.46
3529 5373 8.522830 TCAAGGAACACATTAATCAAGAAATCC 58.477 33.333 0.00 0.00 0.00 3.01
3530 5374 9.912634 TTCAAGGAACACATTAATCAAGAAATC 57.087 29.630 0.00 0.00 0.00 2.17
3532 5376 9.695526 CATTCAAGGAACACATTAATCAAGAAA 57.304 29.630 0.00 0.00 0.00 2.52
3533 5377 8.859090 ACATTCAAGGAACACATTAATCAAGAA 58.141 29.630 0.00 0.00 0.00 2.52
3534 5378 8.408043 ACATTCAAGGAACACATTAATCAAGA 57.592 30.769 0.00 0.00 0.00 3.02
3535 5379 8.298854 TGACATTCAAGGAACACATTAATCAAG 58.701 33.333 0.00 0.00 0.00 3.02
3536 5380 8.081633 GTGACATTCAAGGAACACATTAATCAA 58.918 33.333 0.00 0.00 0.00 2.57
3537 5381 7.448161 AGTGACATTCAAGGAACACATTAATCA 59.552 33.333 0.00 0.00 0.00 2.57
3538 5382 7.820648 AGTGACATTCAAGGAACACATTAATC 58.179 34.615 0.00 0.00 0.00 1.75
3558 5402 9.764363 TCTACATATCCATGAATAACAAGTGAC 57.236 33.333 0.00 0.00 35.96 3.67
3682 5540 0.806868 CACATAGGCAGGTGCACAAG 59.193 55.000 20.43 11.33 44.36 3.16
3768 5669 8.488668 TGTCATAACCTACCTTAAAAGTATCCC 58.511 37.037 0.00 0.00 0.00 3.85
3783 5684 8.231837 GCACTTTTAAAACGATGTCATAACCTA 58.768 33.333 0.00 0.00 0.00 3.08
3787 5688 5.566016 GCGCACTTTTAAAACGATGTCATAA 59.434 36.000 0.30 0.00 0.00 1.90
3797 5698 2.533942 CAGTGGTGCGCACTTTTAAAAC 59.466 45.455 36.84 22.33 0.00 2.43
3801 5702 0.179043 TCCAGTGGTGCGCACTTTTA 60.179 50.000 36.84 19.59 0.00 1.52
3834 5735 8.413229 AGCAAGTCACAACAACAAAAATATAGT 58.587 29.630 0.00 0.00 0.00 2.12
4046 5947 3.311110 ATGCAGACCGTCCCGTGT 61.311 61.111 0.00 0.00 0.00 4.49
4051 5952 2.401766 CCAAGCATGCAGACCGTCC 61.402 63.158 21.98 0.00 0.00 4.79
4079 5981 3.372730 GCAACGCATTCAGGGCCA 61.373 61.111 6.18 0.00 0.00 5.36
4094 5996 2.046023 CCTTGTCATGGAGGCGCA 60.046 61.111 10.83 0.00 0.00 6.09
4106 6008 3.414700 CGAGCTTTCGCGCCTTGT 61.415 61.111 0.00 0.00 42.32 3.16
4134 6036 7.004086 TGGAACAGTCTATTTTTCTTGGATGT 58.996 34.615 0.00 0.00 0.00 3.06
4277 6180 8.166422 AGTATTTGATTTTCCGTCAAAAGAGT 57.834 30.769 5.52 0.00 45.50 3.24
4278 6181 8.289618 TGAGTATTTGATTTTCCGTCAAAAGAG 58.710 33.333 5.52 0.00 45.50 2.85
4280 6183 8.853345 CATGAGTATTTGATTTTCCGTCAAAAG 58.147 33.333 5.52 0.00 45.50 2.27
4285 6188 7.072177 TGACATGAGTATTTGATTTTCCGTC 57.928 36.000 0.00 0.00 0.00 4.79
4304 6208 9.995003 TGTTTCTTAAAAATGCCTTATTGACAT 57.005 25.926 0.00 0.00 0.00 3.06
4334 6238 2.031333 CCTGCTTCTGCTCTGTTTTCAC 60.031 50.000 0.00 0.00 40.48 3.18
4419 6323 3.074412 ACATCAGTCAACCGGATTGTTC 58.926 45.455 9.46 7.39 39.54 3.18
4441 6345 4.318546 GGAACGAGTTGAATACACACACAC 60.319 45.833 0.00 0.00 0.00 3.82
4442 6346 3.805422 GGAACGAGTTGAATACACACACA 59.195 43.478 0.00 0.00 0.00 3.72
4443 6347 3.805422 TGGAACGAGTTGAATACACACAC 59.195 43.478 0.00 0.00 0.00 3.82
4444 6348 4.055360 CTGGAACGAGTTGAATACACACA 58.945 43.478 0.00 0.00 0.00 3.72
4445 6349 3.432252 CCTGGAACGAGTTGAATACACAC 59.568 47.826 0.00 0.00 0.00 3.82
4464 6368 4.100653 TCCTCTGAGAACAATATCAGCCTG 59.899 45.833 6.17 0.00 43.17 4.85
4794 6702 5.133941 TCATTGCCACCAAAGTAAACTACA 58.866 37.500 0.00 0.00 34.05 2.74
4918 6826 4.747108 CAGAAAGATCACACGAGTCTTGTT 59.253 41.667 0.00 0.00 32.85 2.83
4974 6882 2.034124 AGTGCAGTGCTGGTTGATTTT 58.966 42.857 17.60 0.00 0.00 1.82
4995 6903 2.456119 GGTCCGCACAATCTCGCTG 61.456 63.158 0.00 0.00 0.00 5.18
5069 6977 3.338249 CAAAGATCGACCACCTTGATGT 58.662 45.455 0.00 0.00 0.00 3.06
5239 7147 1.533625 CCCTCTTCCGACAAATGCAA 58.466 50.000 0.00 0.00 0.00 4.08
5307 7215 1.422781 CAGTGTAGGCATGGATCCCAT 59.577 52.381 9.90 0.00 46.37 4.00
5502 7410 1.069090 ACAAAGCGACCGAAGAGCA 59.931 52.632 0.00 0.00 0.00 4.26
5578 7486 9.832445 AACATGTCCATTATTAATTCTACGACT 57.168 29.630 0.00 0.00 0.00 4.18
5617 7525 0.036306 CCCCCAACTTAGCTCAACGT 59.964 55.000 0.00 0.00 0.00 3.99
5627 7535 0.631212 GATCCATCCACCCCCAACTT 59.369 55.000 0.00 0.00 0.00 2.66
5635 7543 0.107456 ACATCAGCGATCCATCCACC 59.893 55.000 0.00 0.00 0.00 4.61
5763 7671 5.582439 GGCAACTGATGAGTATACAATCG 57.418 43.478 5.50 7.10 0.00 3.34
5891 7808 2.621000 GCGATTTAGCAGCGTCCG 59.379 61.111 0.00 0.00 37.05 4.79
5898 7815 2.822255 GTGGCCGGCGATTTAGCA 60.822 61.111 22.54 7.91 39.27 3.49
5916 7833 2.684927 GCCCTCTGATGTAATTGGTGCT 60.685 50.000 0.00 0.00 0.00 4.40
5920 7837 4.646040 TGATTTGCCCTCTGATGTAATTGG 59.354 41.667 0.00 0.00 0.00 3.16
5928 7845 2.683152 GCTCACTGATTTGCCCTCTGAT 60.683 50.000 0.00 0.00 0.00 2.90
5929 7846 1.339438 GCTCACTGATTTGCCCTCTGA 60.339 52.381 0.00 0.00 0.00 3.27
5930 7847 1.093159 GCTCACTGATTTGCCCTCTG 58.907 55.000 0.00 0.00 0.00 3.35
5931 7848 0.034670 GGCTCACTGATTTGCCCTCT 60.035 55.000 0.00 0.00 39.49 3.69
5932 7849 0.322816 TGGCTCACTGATTTGCCCTC 60.323 55.000 5.55 0.00 44.32 4.30
5933 7850 0.112995 TTGGCTCACTGATTTGCCCT 59.887 50.000 5.55 0.00 44.32 5.19
5934 7851 0.968405 TTTGGCTCACTGATTTGCCC 59.032 50.000 5.55 0.00 44.32 5.36
5937 7854 2.608752 GGCTGTTTGGCTCACTGATTTG 60.609 50.000 0.00 0.00 38.32 2.32
5938 7855 1.615392 GGCTGTTTGGCTCACTGATTT 59.385 47.619 0.00 0.00 38.32 2.17
5940 7857 0.111061 TGGCTGTTTGGCTCACTGAT 59.889 50.000 0.00 0.00 42.34 2.90
5941 7858 0.819259 GTGGCTGTTTGGCTCACTGA 60.819 55.000 0.00 0.00 42.34 3.41
5942 7859 1.102809 TGTGGCTGTTTGGCTCACTG 61.103 55.000 0.00 0.00 39.30 3.66
5943 7860 0.820891 CTGTGGCTGTTTGGCTCACT 60.821 55.000 0.00 0.00 39.30 3.41
5944 7861 1.656441 CTGTGGCTGTTTGGCTCAC 59.344 57.895 0.00 0.00 39.30 3.51
5945 7862 2.195567 GCTGTGGCTGTTTGGCTCA 61.196 57.895 0.00 0.00 41.37 4.26
5946 7863 2.195567 TGCTGTGGCTGTTTGGCTC 61.196 57.895 0.00 0.00 42.34 4.70
5947 7864 2.123769 TGCTGTGGCTGTTTGGCT 60.124 55.556 0.00 0.00 42.34 4.75
5948 7865 2.028043 GTGCTGTGGCTGTTTGGC 59.972 61.111 0.00 0.00 39.59 4.52
5949 7866 2.079020 CTGGTGCTGTGGCTGTTTGG 62.079 60.000 0.00 0.00 39.59 3.28
5950 7867 1.361271 CTGGTGCTGTGGCTGTTTG 59.639 57.895 0.00 0.00 39.59 2.93
5951 7868 0.684153 AACTGGTGCTGTGGCTGTTT 60.684 50.000 0.00 0.00 39.59 2.83
5952 7869 0.182537 TAACTGGTGCTGTGGCTGTT 59.817 50.000 0.00 0.00 39.59 3.16
5953 7870 0.535102 GTAACTGGTGCTGTGGCTGT 60.535 55.000 0.00 0.00 39.59 4.40
5954 7871 0.534877 TGTAACTGGTGCTGTGGCTG 60.535 55.000 0.00 0.00 39.59 4.85
5955 7872 0.401738 ATGTAACTGGTGCTGTGGCT 59.598 50.000 0.00 0.00 39.59 4.75
5956 7873 0.804989 GATGTAACTGGTGCTGTGGC 59.195 55.000 0.00 0.00 39.26 5.01
5957 7874 2.079158 CTGATGTAACTGGTGCTGTGG 58.921 52.381 0.00 0.00 0.00 4.17
5958 7875 2.998670 CTCTGATGTAACTGGTGCTGTG 59.001 50.000 0.00 0.00 0.00 3.66
5959 7876 2.027745 CCTCTGATGTAACTGGTGCTGT 60.028 50.000 0.00 0.00 0.00 4.40
5960 7877 2.625737 CCTCTGATGTAACTGGTGCTG 58.374 52.381 0.00 0.00 0.00 4.41
5961 7878 1.556911 CCCTCTGATGTAACTGGTGCT 59.443 52.381 0.00 0.00 0.00 4.40
5962 7879 2.014068 GCCCTCTGATGTAACTGGTGC 61.014 57.143 0.00 0.00 0.00 5.01
5963 7880 1.278985 TGCCCTCTGATGTAACTGGTG 59.721 52.381 0.00 0.00 0.00 4.17
5964 7881 1.656587 TGCCCTCTGATGTAACTGGT 58.343 50.000 0.00 0.00 0.00 4.00
5965 7882 2.787473 TTGCCCTCTGATGTAACTGG 57.213 50.000 0.00 0.00 0.00 4.00
5966 7883 4.264253 TGATTTGCCCTCTGATGTAACTG 58.736 43.478 0.00 0.00 0.00 3.16
5967 7884 4.574674 TGATTTGCCCTCTGATGTAACT 57.425 40.909 0.00 0.00 0.00 2.24
5968 7885 5.357878 TCATTGATTTGCCCTCTGATGTAAC 59.642 40.000 0.00 0.00 0.00 2.50
5969 7886 5.508567 TCATTGATTTGCCCTCTGATGTAA 58.491 37.500 0.00 0.00 0.00 2.41
5970 7887 5.114764 TCATTGATTTGCCCTCTGATGTA 57.885 39.130 0.00 0.00 0.00 2.29
5971 7888 3.952323 CTCATTGATTTGCCCTCTGATGT 59.048 43.478 0.00 0.00 0.00 3.06
5972 7889 3.243434 GCTCATTGATTTGCCCTCTGATG 60.243 47.826 0.00 0.00 0.00 3.07
5973 7890 2.957006 GCTCATTGATTTGCCCTCTGAT 59.043 45.455 0.00 0.00 0.00 2.90
5974 7891 2.372264 GCTCATTGATTTGCCCTCTGA 58.628 47.619 0.00 0.00 0.00 3.27
5975 7892 1.407979 GGCTCATTGATTTGCCCTCTG 59.592 52.381 4.46 0.00 39.49 3.35
5976 7893 1.006281 TGGCTCATTGATTTGCCCTCT 59.994 47.619 11.64 0.00 44.32 3.69
5977 7894 1.477553 TGGCTCATTGATTTGCCCTC 58.522 50.000 11.64 0.00 44.32 4.30
5978 7895 1.941377 TTGGCTCATTGATTTGCCCT 58.059 45.000 11.64 0.00 44.32 5.19
5979 7896 2.289569 TGTTTGGCTCATTGATTTGCCC 60.290 45.455 11.64 0.00 44.32 5.36
5980 7897 2.738314 GTGTTTGGCTCATTGATTTGCC 59.262 45.455 8.16 8.16 45.10 4.52
5981 7898 2.409378 CGTGTTTGGCTCATTGATTTGC 59.591 45.455 0.00 0.00 0.00 3.68
5982 7899 3.641648 ACGTGTTTGGCTCATTGATTTG 58.358 40.909 0.00 0.00 0.00 2.32
5983 7900 4.050553 CAACGTGTTTGGCTCATTGATTT 58.949 39.130 0.00 0.00 0.00 2.17
5984 7901 3.317711 TCAACGTGTTTGGCTCATTGATT 59.682 39.130 0.00 0.00 35.69 2.57
5985 7902 2.884012 TCAACGTGTTTGGCTCATTGAT 59.116 40.909 0.00 0.00 35.69 2.57
5986 7903 2.032799 GTCAACGTGTTTGGCTCATTGA 59.967 45.455 0.00 0.00 36.82 2.57
5987 7904 2.384382 GTCAACGTGTTTGGCTCATTG 58.616 47.619 0.00 0.00 36.82 2.82
5988 7905 2.774439 GTCAACGTGTTTGGCTCATT 57.226 45.000 0.00 0.00 36.82 2.57
5993 7910 2.096819 TCAAGAAGTCAACGTGTTTGGC 59.903 45.455 0.00 0.00 40.45 4.52
5994 7911 4.552166 ATCAAGAAGTCAACGTGTTTGG 57.448 40.909 0.00 0.00 35.69 3.28
5995 7912 5.568482 TGAATCAAGAAGTCAACGTGTTTG 58.432 37.500 0.00 0.00 36.42 2.93
5996 7913 5.811399 TGAATCAAGAAGTCAACGTGTTT 57.189 34.783 0.00 0.00 0.00 2.83
5997 7914 5.811399 TTGAATCAAGAAGTCAACGTGTT 57.189 34.783 0.00 0.00 0.00 3.32
5998 7915 5.049405 GGATTGAATCAAGAAGTCAACGTGT 60.049 40.000 7.56 0.00 34.28 4.49
5999 7916 5.180117 AGGATTGAATCAAGAAGTCAACGTG 59.820 40.000 7.56 0.00 34.28 4.49
6000 7917 5.308825 AGGATTGAATCAAGAAGTCAACGT 58.691 37.500 7.56 0.00 34.28 3.99
6001 7918 5.445142 CGAGGATTGAATCAAGAAGTCAACG 60.445 44.000 7.56 1.03 34.28 4.10
6002 7919 5.672321 GCGAGGATTGAATCAAGAAGTCAAC 60.672 44.000 7.56 0.00 34.28 3.18
6003 7920 4.393062 GCGAGGATTGAATCAAGAAGTCAA 59.607 41.667 7.56 3.10 35.83 3.18
6004 7921 3.935203 GCGAGGATTGAATCAAGAAGTCA 59.065 43.478 7.56 0.00 0.00 3.41
6005 7922 3.935203 TGCGAGGATTGAATCAAGAAGTC 59.065 43.478 7.56 0.00 0.00 3.01
6006 7923 3.686726 GTGCGAGGATTGAATCAAGAAGT 59.313 43.478 7.56 0.00 0.00 3.01
6007 7924 3.064545 GGTGCGAGGATTGAATCAAGAAG 59.935 47.826 7.56 0.00 0.00 2.85
6008 7925 3.009723 GGTGCGAGGATTGAATCAAGAA 58.990 45.455 7.56 0.00 0.00 2.52
6009 7926 2.027285 TGGTGCGAGGATTGAATCAAGA 60.027 45.455 7.56 0.00 0.00 3.02
6010 7927 2.358957 TGGTGCGAGGATTGAATCAAG 58.641 47.619 7.56 0.00 0.00 3.02
6011 7928 2.488204 TGGTGCGAGGATTGAATCAA 57.512 45.000 7.56 0.00 0.00 2.57
6012 7929 2.291365 CATGGTGCGAGGATTGAATCA 58.709 47.619 7.56 0.00 0.00 2.57
6013 7930 1.002033 GCATGGTGCGAGGATTGAATC 60.002 52.381 0.00 0.00 31.71 2.52
6014 7931 1.027357 GCATGGTGCGAGGATTGAAT 58.973 50.000 0.00 0.00 31.71 2.57
6015 7932 2.481212 GCATGGTGCGAGGATTGAA 58.519 52.632 0.00 0.00 31.71 2.69
6016 7933 4.223800 GCATGGTGCGAGGATTGA 57.776 55.556 0.00 0.00 31.71 2.57
6025 7942 4.024048 ACATTTATTAGCTACGCATGGTGC 60.024 41.667 0.00 0.00 40.69 5.01
6026 7943 5.443261 CACATTTATTAGCTACGCATGGTG 58.557 41.667 0.00 0.00 0.00 4.17
6027 7944 4.024048 GCACATTTATTAGCTACGCATGGT 60.024 41.667 0.00 0.00 0.00 3.55
6028 7945 4.024133 TGCACATTTATTAGCTACGCATGG 60.024 41.667 0.00 0.00 0.00 3.66
6029 7946 5.094429 TGCACATTTATTAGCTACGCATG 57.906 39.130 0.00 0.00 0.00 4.06
6030 7947 4.214119 CCTGCACATTTATTAGCTACGCAT 59.786 41.667 0.00 0.00 0.00 4.73
6031 7948 3.559655 CCTGCACATTTATTAGCTACGCA 59.440 43.478 0.00 0.00 0.00 5.24
6032 7949 3.607078 GCCTGCACATTTATTAGCTACGC 60.607 47.826 0.00 0.00 0.00 4.42
6033 7950 3.559655 TGCCTGCACATTTATTAGCTACG 59.440 43.478 0.00 0.00 0.00 3.51
6034 7951 4.848757 GTGCCTGCACATTTATTAGCTAC 58.151 43.478 16.95 0.00 45.53 3.58
6047 7964 2.728846 CGTGAATGTAATGTGCCTGCAC 60.729 50.000 15.15 15.15 46.33 4.57
6048 7965 1.468127 CGTGAATGTAATGTGCCTGCA 59.532 47.619 0.00 0.00 0.00 4.41
6049 7966 1.202177 CCGTGAATGTAATGTGCCTGC 60.202 52.381 0.00 0.00 0.00 4.85
6050 7967 1.401552 CCCGTGAATGTAATGTGCCTG 59.598 52.381 0.00 0.00 0.00 4.85
6051 7968 1.681780 CCCCGTGAATGTAATGTGCCT 60.682 52.381 0.00 0.00 0.00 4.75
6052 7969 0.738389 CCCCGTGAATGTAATGTGCC 59.262 55.000 0.00 0.00 0.00 5.01
6053 7970 1.745232 TCCCCGTGAATGTAATGTGC 58.255 50.000 0.00 0.00 0.00 4.57
6054 7971 3.944650 TCAATCCCCGTGAATGTAATGTG 59.055 43.478 0.00 0.00 0.00 3.21
6055 7972 4.229304 TCAATCCCCGTGAATGTAATGT 57.771 40.909 0.00 0.00 0.00 2.71
6056 7973 4.640201 AGTTCAATCCCCGTGAATGTAATG 59.360 41.667 0.00 0.00 37.34 1.90
6057 7974 4.855340 AGTTCAATCCCCGTGAATGTAAT 58.145 39.130 0.00 0.00 37.34 1.89
6058 7975 4.258543 GAGTTCAATCCCCGTGAATGTAA 58.741 43.478 0.00 0.00 37.34 2.41
6059 7976 3.262151 TGAGTTCAATCCCCGTGAATGTA 59.738 43.478 0.00 0.00 37.34 2.29
6060 7977 2.039746 TGAGTTCAATCCCCGTGAATGT 59.960 45.455 0.00 0.00 37.34 2.71
6061 7978 2.710377 TGAGTTCAATCCCCGTGAATG 58.290 47.619 0.00 0.00 37.34 2.67
6062 7979 3.433306 TTGAGTTCAATCCCCGTGAAT 57.567 42.857 0.00 0.00 37.34 2.57
6063 7980 2.882137 GTTTGAGTTCAATCCCCGTGAA 59.118 45.455 0.00 0.00 35.55 3.18
6064 7981 2.500229 GTTTGAGTTCAATCCCCGTGA 58.500 47.619 0.00 0.00 35.55 4.35
6065 7982 1.539827 GGTTTGAGTTCAATCCCCGTG 59.460 52.381 9.77 0.00 38.93 4.94
6066 7983 1.423921 AGGTTTGAGTTCAATCCCCGT 59.576 47.619 15.12 0.00 43.40 5.28
6067 7984 2.200373 AGGTTTGAGTTCAATCCCCG 57.800 50.000 15.12 0.00 43.40 5.73
6068 7985 3.496331 TCAAGGTTTGAGTTCAATCCCC 58.504 45.455 15.12 7.61 43.40 4.81
6069 7986 4.619160 GCATCAAGGTTTGAGTTCAATCCC 60.619 45.833 15.12 9.56 43.40 3.85
6070 7987 4.022068 TGCATCAAGGTTTGAGTTCAATCC 60.022 41.667 12.12 12.12 43.98 3.01
6071 7988 5.125100 TGCATCAAGGTTTGAGTTCAATC 57.875 39.130 0.00 0.00 43.98 2.67
6072 7989 4.560108 GCTGCATCAAGGTTTGAGTTCAAT 60.560 41.667 0.00 0.00 43.98 2.57
6073 7990 3.243501 GCTGCATCAAGGTTTGAGTTCAA 60.244 43.478 0.00 0.00 43.98 2.69
6074 7991 2.294233 GCTGCATCAAGGTTTGAGTTCA 59.706 45.455 0.00 0.00 43.98 3.18
6075 7992 2.555757 AGCTGCATCAAGGTTTGAGTTC 59.444 45.455 1.02 0.00 43.98 3.01
6076 7993 2.590821 AGCTGCATCAAGGTTTGAGTT 58.409 42.857 1.02 0.00 43.98 3.01
6077 7994 2.283145 AGCTGCATCAAGGTTTGAGT 57.717 45.000 1.02 0.00 43.98 3.41
6078 7995 2.352421 CCAAGCTGCATCAAGGTTTGAG 60.352 50.000 1.02 0.00 43.98 3.02
6079 7996 1.614903 CCAAGCTGCATCAAGGTTTGA 59.385 47.619 1.02 0.00 45.01 2.69
6080 7997 1.614903 TCCAAGCTGCATCAAGGTTTG 59.385 47.619 1.02 0.00 35.76 2.93
6081 7998 1.891150 CTCCAAGCTGCATCAAGGTTT 59.109 47.619 1.02 0.00 35.76 3.27
6082 7999 1.542492 CTCCAAGCTGCATCAAGGTT 58.458 50.000 1.02 0.00 38.39 3.50
6083 8000 0.964358 GCTCCAAGCTGCATCAAGGT 60.964 55.000 1.02 0.00 38.45 3.50
6084 8001 1.807886 GCTCCAAGCTGCATCAAGG 59.192 57.895 1.02 0.00 38.45 3.61
6159 8076 2.031012 CAAGCTGCCGTGGAGACA 59.969 61.111 0.00 0.00 38.70 3.41
6160 8077 2.743928 CCAAGCTGCCGTGGAGAC 60.744 66.667 13.31 0.00 42.42 3.36
6161 8078 4.704833 GCCAAGCTGCCGTGGAGA 62.705 66.667 20.76 0.00 42.42 3.71
6191 8108 4.166011 GAACATGCCAGCCGACGC 62.166 66.667 0.00 0.00 0.00 5.19
6192 8109 3.499737 GGAACATGCCAGCCGACG 61.500 66.667 0.00 0.00 0.00 5.12
6193 8110 3.499737 CGGAACATGCCAGCCGAC 61.500 66.667 9.67 0.00 46.29 4.79
6194 8111 4.776322 CCGGAACATGCCAGCCGA 62.776 66.667 15.07 0.00 46.29 5.54
6198 8115 3.499737 GACGCCGGAACATGCCAG 61.500 66.667 5.05 0.00 0.00 4.85
6232 8149 2.357034 TCGAAGGCCGACACAAGC 60.357 61.111 0.00 0.00 43.23 4.01
6240 8157 2.731374 GAGAGGGATCGAAGGCCG 59.269 66.667 0.00 0.00 40.25 6.13
6241 8158 1.051556 AAGGAGAGGGATCGAAGGCC 61.052 60.000 0.00 0.00 0.00 5.19
6242 8159 0.105778 CAAGGAGAGGGATCGAAGGC 59.894 60.000 0.00 0.00 0.00 4.35
6243 8160 1.410882 GACAAGGAGAGGGATCGAAGG 59.589 57.143 0.00 0.00 0.00 3.46
6244 8161 1.066303 CGACAAGGAGAGGGATCGAAG 59.934 57.143 0.00 0.00 0.00 3.79
6245 8162 1.103803 CGACAAGGAGAGGGATCGAA 58.896 55.000 0.00 0.00 0.00 3.71
6246 8163 0.034380 ACGACAAGGAGAGGGATCGA 60.034 55.000 0.00 0.00 33.88 3.59
6247 8164 0.101399 CACGACAAGGAGAGGGATCG 59.899 60.000 0.00 0.00 35.74 3.69
6248 8165 1.134965 CACACGACAAGGAGAGGGATC 60.135 57.143 0.00 0.00 0.00 3.36
6249 8166 0.898320 CACACGACAAGGAGAGGGAT 59.102 55.000 0.00 0.00 0.00 3.85
6250 8167 1.185618 CCACACGACAAGGAGAGGGA 61.186 60.000 0.00 0.00 0.00 4.20
6251 8168 1.293498 CCACACGACAAGGAGAGGG 59.707 63.158 0.00 0.00 0.00 4.30
6252 8169 1.293498 CCCACACGACAAGGAGAGG 59.707 63.158 0.00 0.00 0.00 3.69
6253 8170 1.374758 GCCCACACGACAAGGAGAG 60.375 63.158 0.00 0.00 0.00 3.20
6254 8171 2.741092 GCCCACACGACAAGGAGA 59.259 61.111 0.00 0.00 0.00 3.71
6255 8172 2.738521 CGCCCACACGACAAGGAG 60.739 66.667 0.00 0.00 34.06 3.69
6256 8173 4.980805 GCGCCCACACGACAAGGA 62.981 66.667 0.00 0.00 34.06 3.36
6257 8174 3.583276 TAGCGCCCACACGACAAGG 62.583 63.158 2.29 0.00 34.06 3.61
6258 8175 2.048597 TAGCGCCCACACGACAAG 60.049 61.111 2.29 0.00 34.06 3.16
6259 8176 2.356553 GTAGCGCCCACACGACAA 60.357 61.111 2.29 0.00 34.06 3.18
6260 8177 2.372040 AAAGTAGCGCCCACACGACA 62.372 55.000 2.29 0.00 34.06 4.35
6261 8178 1.623973 GAAAGTAGCGCCCACACGAC 61.624 60.000 2.29 0.00 34.06 4.34
6262 8179 1.373748 GAAAGTAGCGCCCACACGA 60.374 57.895 2.29 0.00 34.06 4.35
6263 8180 2.726691 CGAAAGTAGCGCCCACACG 61.727 63.158 2.29 6.69 0.00 4.49
6264 8181 1.666872 ACGAAAGTAGCGCCCACAC 60.667 57.895 2.29 0.00 46.88 3.82
6265 8182 2.738480 ACGAAAGTAGCGCCCACA 59.262 55.556 2.29 0.00 46.88 4.17
6276 8193 1.574702 GGCCAACCCTTCGACGAAAG 61.575 60.000 12.03 5.43 0.00 2.62
6277 8194 1.598685 GGCCAACCCTTCGACGAAA 60.599 57.895 12.03 0.00 0.00 3.46
6278 8195 2.031465 GGCCAACCCTTCGACGAA 59.969 61.111 10.34 10.34 0.00 3.85
6288 8205 0.895559 CAACTGGAAGAGGGCCAACC 60.896 60.000 6.18 3.71 37.43 3.77
6289 8206 0.178990 ACAACTGGAAGAGGGCCAAC 60.179 55.000 6.18 0.00 37.43 3.77
6290 8207 0.178992 CACAACTGGAAGAGGGCCAA 60.179 55.000 6.18 0.00 37.43 4.52
6291 8208 1.455849 CACAACTGGAAGAGGGCCA 59.544 57.895 6.18 0.00 37.43 5.36
6292 8209 1.303643 CCACAACTGGAAGAGGGCC 60.304 63.158 0.00 0.00 40.55 5.80
6293 8210 0.606673 GACCACAACTGGAAGAGGGC 60.607 60.000 0.00 0.00 40.55 5.19
6294 8211 0.036875 GGACCACAACTGGAAGAGGG 59.963 60.000 0.00 0.00 40.55 4.30
6295 8212 0.764890 TGGACCACAACTGGAAGAGG 59.235 55.000 0.00 0.00 40.55 3.69
6296 8213 2.704572 GATGGACCACAACTGGAAGAG 58.295 52.381 0.00 0.00 40.55 2.85
6297 8214 1.001974 CGATGGACCACAACTGGAAGA 59.998 52.381 0.00 0.00 40.55 2.87
6298 8215 1.442769 CGATGGACCACAACTGGAAG 58.557 55.000 0.00 0.00 40.55 3.46
6299 8216 0.605319 GCGATGGACCACAACTGGAA 60.605 55.000 0.00 0.00 40.55 3.53
6300 8217 1.003839 GCGATGGACCACAACTGGA 60.004 57.895 0.00 0.00 40.55 3.86
6301 8218 1.003355 AGCGATGGACCACAACTGG 60.003 57.895 0.00 0.00 44.26 4.00
6302 8219 1.354337 CGAGCGATGGACCACAACTG 61.354 60.000 0.00 0.00 0.00 3.16
6303 8220 1.079819 CGAGCGATGGACCACAACT 60.080 57.895 0.00 0.00 0.00 3.16
6304 8221 0.949105 AACGAGCGATGGACCACAAC 60.949 55.000 0.00 0.00 0.00 3.32
6305 8222 0.669318 GAACGAGCGATGGACCACAA 60.669 55.000 0.00 0.00 0.00 3.33
6306 8223 1.080093 GAACGAGCGATGGACCACA 60.080 57.895 0.00 0.00 0.00 4.17
6307 8224 2.158959 CGAACGAGCGATGGACCAC 61.159 63.158 0.00 0.00 0.00 4.16
6308 8225 2.180769 CGAACGAGCGATGGACCA 59.819 61.111 0.00 0.00 0.00 4.02
6309 8226 3.255379 GCGAACGAGCGATGGACC 61.255 66.667 5.91 0.00 0.00 4.46
6318 8235 4.695231 ACACCGGACGCGAACGAG 62.695 66.667 23.83 18.25 43.93 4.18
6319 8236 4.268939 AACACCGGACGCGAACGA 62.269 61.111 23.83 0.00 43.93 3.85
6321 8238 4.364409 GCAACACCGGACGCGAAC 62.364 66.667 15.93 6.28 0.00 3.95
6322 8239 4.893601 TGCAACACCGGACGCGAA 62.894 61.111 15.93 0.00 0.00 4.70
6325 8242 4.980805 TCCTGCAACACCGGACGC 62.981 66.667 9.46 5.21 0.00 5.19
6326 8243 3.041940 GTCCTGCAACACCGGACG 61.042 66.667 9.46 0.00 38.00 4.79
6327 8244 1.961277 CAGTCCTGCAACACCGGAC 60.961 63.158 9.46 12.91 45.88 4.79
6328 8245 2.099652 CTCAGTCCTGCAACACCGGA 62.100 60.000 9.46 0.00 0.00 5.14
6329 8246 1.669115 CTCAGTCCTGCAACACCGG 60.669 63.158 0.00 0.00 0.00 5.28
6330 8247 2.320587 GCTCAGTCCTGCAACACCG 61.321 63.158 0.00 0.00 0.00 4.94
6331 8248 0.952984 GAGCTCAGTCCTGCAACACC 60.953 60.000 9.40 0.00 0.00 4.16
6332 8249 1.287730 CGAGCTCAGTCCTGCAACAC 61.288 60.000 15.40 0.00 0.00 3.32
6333 8250 1.005748 CGAGCTCAGTCCTGCAACA 60.006 57.895 15.40 0.00 0.00 3.33
6334 8251 1.005630 ACGAGCTCAGTCCTGCAAC 60.006 57.895 15.40 0.00 0.00 4.17
6335 8252 1.181741 AGACGAGCTCAGTCCTGCAA 61.182 55.000 25.07 0.00 39.31 4.08
6336 8253 1.590610 GAGACGAGCTCAGTCCTGCA 61.591 60.000 25.07 0.00 43.38 4.41
6337 8254 1.138671 GAGACGAGCTCAGTCCTGC 59.861 63.158 25.07 15.95 43.38 4.85
6338 8255 1.427419 CGAGACGAGCTCAGTCCTG 59.573 63.158 25.07 17.74 44.15 3.86
6339 8256 2.403378 GCGAGACGAGCTCAGTCCT 61.403 63.158 25.07 16.73 44.15 3.85
6340 8257 2.101380 GCGAGACGAGCTCAGTCC 59.899 66.667 25.07 18.34 44.15 3.85
6351 8268 4.129737 TACTGCCAGGCGCGAGAC 62.130 66.667 12.10 0.00 42.08 3.36
6352 8269 3.826754 CTACTGCCAGGCGCGAGA 61.827 66.667 12.10 0.00 42.08 4.04
6353 8270 4.880537 CCTACTGCCAGGCGCGAG 62.881 72.222 12.10 0.65 42.08 5.03
6355 8272 3.740128 ATTCCTACTGCCAGGCGCG 62.740 63.158 7.03 0.00 42.08 6.86
6356 8273 2.182842 CATTCCTACTGCCAGGCGC 61.183 63.158 7.03 0.00 35.49 6.53
6357 8274 1.524621 CCATTCCTACTGCCAGGCG 60.525 63.158 7.03 4.22 35.49 5.52
6358 8275 0.464554 GACCATTCCTACTGCCAGGC 60.465 60.000 3.66 3.66 35.49 4.85
6359 8276 0.911769 TGACCATTCCTACTGCCAGG 59.088 55.000 0.00 0.00 37.00 4.45
6360 8277 2.787473 TTGACCATTCCTACTGCCAG 57.213 50.000 0.00 0.00 0.00 4.85
6361 8278 2.357050 CCATTGACCATTCCTACTGCCA 60.357 50.000 0.00 0.00 0.00 4.92
6362 8279 2.092429 TCCATTGACCATTCCTACTGCC 60.092 50.000 0.00 0.00 0.00 4.85
6363 8280 3.209410 CTCCATTGACCATTCCTACTGC 58.791 50.000 0.00 0.00 0.00 4.40
6364 8281 3.813443 CCTCCATTGACCATTCCTACTG 58.187 50.000 0.00 0.00 0.00 2.74
6365 8282 2.173569 GCCTCCATTGACCATTCCTACT 59.826 50.000 0.00 0.00 0.00 2.57
6366 8283 2.576615 GCCTCCATTGACCATTCCTAC 58.423 52.381 0.00 0.00 0.00 3.18
6367 8284 1.494721 GGCCTCCATTGACCATTCCTA 59.505 52.381 0.00 0.00 0.00 2.94
6368 8285 0.259938 GGCCTCCATTGACCATTCCT 59.740 55.000 0.00 0.00 0.00 3.36
6369 8286 1.103398 CGGCCTCCATTGACCATTCC 61.103 60.000 0.00 0.00 0.00 3.01
6370 8287 1.103398 CCGGCCTCCATTGACCATTC 61.103 60.000 0.00 0.00 0.00 2.67
6371 8288 1.076777 CCGGCCTCCATTGACCATT 60.077 57.895 0.00 0.00 0.00 3.16
6372 8289 1.863155 AACCGGCCTCCATTGACCAT 61.863 55.000 0.00 0.00 0.00 3.55
6373 8290 2.075355 AAACCGGCCTCCATTGACCA 62.075 55.000 0.00 0.00 0.00 4.02
6374 8291 0.898326 AAAACCGGCCTCCATTGACC 60.898 55.000 0.00 0.00 0.00 4.02
6375 8292 0.243636 CAAAACCGGCCTCCATTGAC 59.756 55.000 0.00 0.00 0.00 3.18
6376 8293 0.897863 CCAAAACCGGCCTCCATTGA 60.898 55.000 0.00 0.00 0.00 2.57
6377 8294 1.591183 CCAAAACCGGCCTCCATTG 59.409 57.895 0.00 1.02 0.00 2.82
6378 8295 4.111967 CCAAAACCGGCCTCCATT 57.888 55.556 0.00 0.00 0.00 3.16
6388 8305 0.249699 CCAAAAGGTCGGCCAAAACC 60.250 55.000 9.71 7.25 37.19 3.27
6389 8306 0.249699 CCCAAAAGGTCGGCCAAAAC 60.250 55.000 9.71 0.00 37.19 2.43
6390 8307 2.128729 CCCAAAAGGTCGGCCAAAA 58.871 52.632 9.71 0.00 37.19 2.44
6391 8308 3.863606 CCCAAAAGGTCGGCCAAA 58.136 55.556 9.71 0.00 37.19 3.28
6427 8344 4.659172 TGCCTTTCGCACCCCTGG 62.659 66.667 0.00 0.00 44.64 4.45
6428 8345 3.058160 CTGCCTTTCGCACCCCTG 61.058 66.667 0.00 0.00 44.64 4.45


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.