Multiple sequence alignment - TraesCS4D01G128800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G128800 chr4D 100.000 3828 0 0 1 3828 113169776 113173603 0.000000e+00 7070.0
1 TraesCS4D01G128800 chr4D 96.635 743 19 5 3090 3828 450686822 450687562 0.000000e+00 1229.0
2 TraesCS4D01G128800 chr4D 95.277 741 30 5 3089 3828 461232371 461231635 0.000000e+00 1170.0
3 TraesCS4D01G128800 chr4D 95.000 740 31 6 3090 3828 475145976 475145242 0.000000e+00 1157.0
4 TraesCS4D01G128800 chr4D 92.547 322 9 5 412 722 53735383 53735066 7.540000e-122 448.0
5 TraesCS4D01G128800 chr4D 88.034 117 6 6 2112 2227 375382014 375381905 8.630000e-27 132.0
6 TraesCS4D01G128800 chr4A 92.275 1178 51 16 972 2113 464112528 464111355 0.000000e+00 1635.0
7 TraesCS4D01G128800 chr4A 87.643 526 30 13 2582 3093 464111015 464110511 2.560000e-161 579.0
8 TraesCS4D01G128800 chr4A 94.697 264 12 2 723 984 464112829 464112566 3.560000e-110 409.0
9 TraesCS4D01G128800 chr4A 87.365 277 9 7 2227 2503 464111300 464111050 1.040000e-75 294.0
10 TraesCS4D01G128800 chr4A 100.000 28 0 0 2216 2243 464111353 464111326 7.000000e-03 52.8
11 TraesCS4D01G128800 chr1D 95.957 742 23 5 3090 3828 110577318 110576581 0.000000e+00 1197.0
12 TraesCS4D01G128800 chr1D 95.556 315 12 2 412 725 188464207 188464520 1.590000e-138 503.0
13 TraesCS4D01G128800 chr1D 92.476 319 14 2 409 722 393034971 393035284 7.540000e-122 448.0
14 TraesCS4D01G128800 chr1D 90.769 325 19 3 411 724 289517172 289517496 1.270000e-114 424.0
15 TraesCS4D01G128800 chr7B 95.622 731 24 5 3090 3814 333355592 333356320 0.000000e+00 1166.0
16 TraesCS4D01G128800 chr5B 95.135 740 31 5 3090 3828 703099256 703099991 0.000000e+00 1162.0
17 TraesCS4D01G128800 chr3D 95.129 739 31 5 3090 3827 459317285 459316551 0.000000e+00 1160.0
18 TraesCS4D01G128800 chr3D 94.462 325 12 1 409 733 480421171 480420853 2.660000e-136 496.0
19 TraesCS4D01G128800 chr3D 92.182 307 8 4 428 724 83915348 83915648 1.640000e-113 420.0
20 TraesCS4D01G128800 chrUn 94.865 740 32 4 3090 3828 60639037 60639771 0.000000e+00 1151.0
21 TraesCS4D01G128800 chr6B 94.602 741 32 6 3090 3828 519227540 519226806 0.000000e+00 1140.0
22 TraesCS4D01G128800 chr6B 90.566 106 4 4 2112 2217 315650206 315650305 6.670000e-28 135.0
23 TraesCS4D01G128800 chr6B 89.815 108 5 4 2109 2216 219879450 219879349 2.400000e-27 134.0
24 TraesCS4D01G128800 chr4B 93.388 726 29 10 1221 1932 173714195 173714915 0.000000e+00 1057.0
25 TraesCS4D01G128800 chr4B 93.064 519 16 13 723 1223 173713442 173713958 0.000000e+00 741.0
26 TraesCS4D01G128800 chr4B 83.280 628 47 27 2303 2916 173715513 173716096 3.390000e-145 525.0
27 TraesCS4D01G128800 chr4B 94.410 161 7 1 209 369 173713265 173713423 2.950000e-61 246.0
28 TraesCS4D01G128800 chr4B 90.588 170 15 1 3 171 173696449 173696618 1.380000e-54 224.0
29 TraesCS4D01G128800 chr4B 87.209 172 8 6 2914 3081 173716216 173716377 2.350000e-42 183.0
30 TraesCS4D01G128800 chr7D 92.049 327 12 3 410 724 161430462 161430786 7.540000e-122 448.0
31 TraesCS4D01G128800 chr5D 93.709 302 14 1 428 724 41465681 41465982 7.540000e-122 448.0
32 TraesCS4D01G128800 chr5D 91.875 320 16 2 412 726 477961121 477960807 4.540000e-119 438.0
33 TraesCS4D01G128800 chr2D 92.453 318 14 4 411 723 473137638 473137326 2.710000e-121 446.0
34 TraesCS4D01G128800 chr2D 88.793 116 7 4 2107 2222 32407990 32407881 1.850000e-28 137.0
35 TraesCS4D01G128800 chr1A 83.333 294 38 4 431 718 407524845 407525133 1.050000e-65 261.0
36 TraesCS4D01G128800 chr1A 90.654 107 4 6 2110 2216 361384763 361384863 1.850000e-28 137.0
37 TraesCS4D01G128800 chr1A 87.879 99 10 2 1516 1613 229419118 229419215 8.690000e-22 115.0
38 TraesCS4D01G128800 chr7A 90.265 113 5 4 2112 2224 164447343 164447449 3.990000e-30 143.0
39 TraesCS4D01G128800 chr3A 88.696 115 7 4 2109 2223 287684787 287684679 6.670000e-28 135.0
40 TraesCS4D01G128800 chr2A 89.815 108 5 4 2109 2216 416627469 416627570 2.400000e-27 134.0
41 TraesCS4D01G128800 chr2A 83.810 105 9 4 1516 1613 22579126 22579229 4.070000e-15 93.5
42 TraesCS4D01G128800 chr2B 87.395 119 9 3 2114 2232 518046928 518046816 8.630000e-27 132.0
43 TraesCS4D01G128800 chr6D 93.220 59 3 1 1555 1613 38474736 38474793 6.810000e-13 86.1
44 TraesCS4D01G128800 chr6D 91.935 62 4 1 1555 1616 38543045 38542985 6.810000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G128800 chr4D 113169776 113173603 3827 False 7070.00 7070 100.0000 1 3828 1 chr4D.!!$F1 3827
1 TraesCS4D01G128800 chr4D 450686822 450687562 740 False 1229.00 1229 96.6350 3090 3828 1 chr4D.!!$F2 738
2 TraesCS4D01G128800 chr4D 461231635 461232371 736 True 1170.00 1170 95.2770 3089 3828 1 chr4D.!!$R3 739
3 TraesCS4D01G128800 chr4D 475145242 475145976 734 True 1157.00 1157 95.0000 3090 3828 1 chr4D.!!$R4 738
4 TraesCS4D01G128800 chr4A 464110511 464112829 2318 True 593.96 1635 92.3960 723 3093 5 chr4A.!!$R1 2370
5 TraesCS4D01G128800 chr1D 110576581 110577318 737 True 1197.00 1197 95.9570 3090 3828 1 chr1D.!!$R1 738
6 TraesCS4D01G128800 chr7B 333355592 333356320 728 False 1166.00 1166 95.6220 3090 3814 1 chr7B.!!$F1 724
7 TraesCS4D01G128800 chr5B 703099256 703099991 735 False 1162.00 1162 95.1350 3090 3828 1 chr5B.!!$F1 738
8 TraesCS4D01G128800 chr3D 459316551 459317285 734 True 1160.00 1160 95.1290 3090 3827 1 chr3D.!!$R1 737
9 TraesCS4D01G128800 chrUn 60639037 60639771 734 False 1151.00 1151 94.8650 3090 3828 1 chrUn.!!$F1 738
10 TraesCS4D01G128800 chr6B 519226806 519227540 734 True 1140.00 1140 94.6020 3090 3828 1 chr6B.!!$R2 738
11 TraesCS4D01G128800 chr4B 173713265 173716377 3112 False 550.40 1057 90.2702 209 3081 5 chr4B.!!$F2 2872

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
331 332 0.034477 CCGTAAAGAAGGCCCACCAT 60.034 55.0 0.00 0.0 39.06 3.55 F
804 814 0.037697 TCCGTGGTCCTCAATCAACG 60.038 55.0 0.00 0.0 0.00 4.10 F
1070 1132 0.898320 CCCTTCACTGGACAGACGAT 59.102 55.0 6.29 0.0 0.00 3.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2196 2881 0.178897 TACTCCCTCCGTCCCCAAAA 60.179 55.0 0.0 0.0 0.0 2.44 R
2200 2885 0.178995 CTACTACTCCCTCCGTCCCC 60.179 65.0 0.0 0.0 0.0 4.81 R
2861 3598 0.320247 GCCCGTGCCTGATCTATGAG 60.320 60.0 0.0 0.0 0.0 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.977808 TGTCCTCCCCTCTAATCATCC 58.022 52.381 0.00 0.00 0.00 3.51
22 23 2.524440 TGTCCTCCCCTCTAATCATCCT 59.476 50.000 0.00 0.00 0.00 3.24
23 24 3.051032 TGTCCTCCCCTCTAATCATCCTT 60.051 47.826 0.00 0.00 0.00 3.36
24 25 3.580895 GTCCTCCCCTCTAATCATCCTTC 59.419 52.174 0.00 0.00 0.00 3.46
25 26 3.472848 TCCTCCCCTCTAATCATCCTTCT 59.527 47.826 0.00 0.00 0.00 2.85
26 27 3.837731 CCTCCCCTCTAATCATCCTTCTC 59.162 52.174 0.00 0.00 0.00 2.87
27 28 4.450563 CCTCCCCTCTAATCATCCTTCTCT 60.451 50.000 0.00 0.00 0.00 3.10
28 29 4.487804 TCCCCTCTAATCATCCTTCTCTG 58.512 47.826 0.00 0.00 0.00 3.35
29 30 4.170845 TCCCCTCTAATCATCCTTCTCTGA 59.829 45.833 0.00 0.00 0.00 3.27
30 31 5.092968 CCCCTCTAATCATCCTTCTCTGAT 58.907 45.833 0.00 0.00 33.59 2.90
31 32 5.046448 CCCCTCTAATCATCCTTCTCTGATG 60.046 48.000 0.00 0.00 40.77 3.07
32 33 5.543405 CCCTCTAATCATCCTTCTCTGATGT 59.457 44.000 0.00 0.00 40.38 3.06
33 34 6.295236 CCCTCTAATCATCCTTCTCTGATGTC 60.295 46.154 0.00 0.00 40.38 3.06
34 35 6.324561 TCTAATCATCCTTCTCTGATGTCG 57.675 41.667 0.00 0.00 40.38 4.35
35 36 4.333913 AATCATCCTTCTCTGATGTCGG 57.666 45.455 0.00 0.00 40.38 4.79
36 37 2.739943 TCATCCTTCTCTGATGTCGGT 58.260 47.619 0.00 0.00 40.38 4.69
37 38 2.428530 TCATCCTTCTCTGATGTCGGTG 59.571 50.000 0.00 0.00 40.38 4.94
38 39 2.215942 TCCTTCTCTGATGTCGGTGA 57.784 50.000 0.00 0.00 0.00 4.02
39 40 1.819288 TCCTTCTCTGATGTCGGTGAC 59.181 52.381 0.00 0.00 0.00 3.67
40 41 1.134965 CCTTCTCTGATGTCGGTGACC 60.135 57.143 0.00 0.00 0.00 4.02
52 53 2.813908 GTGACCGACACCCGCATC 60.814 66.667 0.00 0.00 43.05 3.91
53 54 4.077184 TGACCGACACCCGCATCC 62.077 66.667 0.00 0.00 36.84 3.51
54 55 4.077184 GACCGACACCCGCATCCA 62.077 66.667 0.00 0.00 36.84 3.41
55 56 3.385749 GACCGACACCCGCATCCAT 62.386 63.158 0.00 0.00 36.84 3.41
56 57 2.588877 CCGACACCCGCATCCATC 60.589 66.667 0.00 0.00 36.84 3.51
57 58 2.588877 CGACACCCGCATCCATCC 60.589 66.667 0.00 0.00 0.00 3.51
58 59 2.203209 GACACCCGCATCCATCCC 60.203 66.667 0.00 0.00 0.00 3.85
59 60 3.774599 GACACCCGCATCCATCCCC 62.775 68.421 0.00 0.00 0.00 4.81
60 61 3.807839 CACCCGCATCCATCCCCA 61.808 66.667 0.00 0.00 0.00 4.96
61 62 2.778278 ACCCGCATCCATCCCCAT 60.778 61.111 0.00 0.00 0.00 4.00
62 63 2.034687 CCCGCATCCATCCCCATC 59.965 66.667 0.00 0.00 0.00 3.51
63 64 2.832778 CCCGCATCCATCCCCATCA 61.833 63.158 0.00 0.00 0.00 3.07
64 65 1.601759 CCGCATCCATCCCCATCAC 60.602 63.158 0.00 0.00 0.00 3.06
65 66 1.962822 CGCATCCATCCCCATCACG 60.963 63.158 0.00 0.00 0.00 4.35
66 67 1.149174 GCATCCATCCCCATCACGT 59.851 57.895 0.00 0.00 0.00 4.49
67 68 0.886490 GCATCCATCCCCATCACGTC 60.886 60.000 0.00 0.00 0.00 4.34
68 69 0.250467 CATCCATCCCCATCACGTCC 60.250 60.000 0.00 0.00 0.00 4.79
69 70 0.694105 ATCCATCCCCATCACGTCCA 60.694 55.000 0.00 0.00 0.00 4.02
70 71 1.153168 CCATCCCCATCACGTCCAC 60.153 63.158 0.00 0.00 0.00 4.02
71 72 1.521457 CATCCCCATCACGTCCACG 60.521 63.158 0.00 0.00 46.33 4.94
72 73 3.385749 ATCCCCATCACGTCCACGC 62.386 63.158 0.00 0.00 44.43 5.34
75 76 4.082523 CCATCACGTCCACGCCCT 62.083 66.667 0.00 0.00 44.43 5.19
76 77 2.509336 CATCACGTCCACGCCCTC 60.509 66.667 0.00 0.00 44.43 4.30
77 78 2.994995 ATCACGTCCACGCCCTCA 60.995 61.111 0.00 0.00 44.43 3.86
78 79 2.579657 ATCACGTCCACGCCCTCAA 61.580 57.895 0.00 0.00 44.43 3.02
79 80 2.781595 ATCACGTCCACGCCCTCAAC 62.782 60.000 0.00 0.00 44.43 3.18
80 81 3.542676 ACGTCCACGCCCTCAACA 61.543 61.111 0.00 0.00 44.43 3.33
81 82 2.047274 CGTCCACGCCCTCAACAT 60.047 61.111 0.00 0.00 0.00 2.71
82 83 2.390599 CGTCCACGCCCTCAACATG 61.391 63.158 0.00 0.00 0.00 3.21
83 84 2.359850 TCCACGCCCTCAACATGC 60.360 61.111 0.00 0.00 0.00 4.06
87 88 3.853330 CGCCCTCAACATGCGTCG 61.853 66.667 0.00 0.00 43.12 5.12
88 89 4.166011 GCCCTCAACATGCGTCGC 62.166 66.667 11.10 11.10 0.00 5.19
89 90 3.499737 CCCTCAACATGCGTCGCC 61.500 66.667 15.88 0.00 0.00 5.54
90 91 3.853330 CCTCAACATGCGTCGCCG 61.853 66.667 15.88 8.54 37.07 6.46
104 105 4.752879 GCCGCGGCTAGTCACCAA 62.753 66.667 41.71 0.00 38.26 3.67
105 106 2.186903 CCGCGGCTAGTCACCAAT 59.813 61.111 14.67 0.00 0.00 3.16
106 107 1.449601 CCGCGGCTAGTCACCAATT 60.450 57.895 14.67 0.00 0.00 2.32
107 108 1.024579 CCGCGGCTAGTCACCAATTT 61.025 55.000 14.67 0.00 0.00 1.82
108 109 0.373716 CGCGGCTAGTCACCAATTTC 59.626 55.000 0.00 0.00 0.00 2.17
109 110 0.373716 GCGGCTAGTCACCAATTTCG 59.626 55.000 0.00 0.00 0.00 3.46
110 111 0.373716 CGGCTAGTCACCAATTTCGC 59.626 55.000 0.00 0.00 0.00 4.70
111 112 0.733150 GGCTAGTCACCAATTTCGCC 59.267 55.000 0.00 0.00 0.00 5.54
112 113 0.373716 GCTAGTCACCAATTTCGCCG 59.626 55.000 0.00 0.00 0.00 6.46
113 114 0.373716 CTAGTCACCAATTTCGCCGC 59.626 55.000 0.00 0.00 0.00 6.53
114 115 0.036765 TAGTCACCAATTTCGCCGCT 60.037 50.000 0.00 0.00 0.00 5.52
115 116 1.154225 GTCACCAATTTCGCCGCTG 60.154 57.895 0.00 0.00 0.00 5.18
116 117 1.599518 TCACCAATTTCGCCGCTGT 60.600 52.632 0.00 0.00 0.00 4.40
117 118 1.169661 TCACCAATTTCGCCGCTGTT 61.170 50.000 0.00 0.00 0.00 3.16
118 119 0.729140 CACCAATTTCGCCGCTGTTC 60.729 55.000 0.00 0.00 0.00 3.18
119 120 0.889186 ACCAATTTCGCCGCTGTTCT 60.889 50.000 0.00 0.00 0.00 3.01
120 121 1.083489 CCAATTTCGCCGCTGTTCTA 58.917 50.000 0.00 0.00 0.00 2.10
121 122 1.202031 CCAATTTCGCCGCTGTTCTAC 60.202 52.381 0.00 0.00 0.00 2.59
122 123 1.084289 AATTTCGCCGCTGTTCTACC 58.916 50.000 0.00 0.00 0.00 3.18
123 124 0.743345 ATTTCGCCGCTGTTCTACCC 60.743 55.000 0.00 0.00 0.00 3.69
124 125 2.791501 TTTCGCCGCTGTTCTACCCC 62.792 60.000 0.00 0.00 0.00 4.95
126 127 4.832608 GCCGCTGTTCTACCCCGG 62.833 72.222 0.00 0.00 41.72 5.73
127 128 4.832608 CCGCTGTTCTACCCCGGC 62.833 72.222 0.00 0.00 31.87 6.13
128 129 4.832608 CGCTGTTCTACCCCGGCC 62.833 72.222 0.00 0.00 0.00 6.13
129 130 3.400054 GCTGTTCTACCCCGGCCT 61.400 66.667 0.00 0.00 0.00 5.19
130 131 2.967946 GCTGTTCTACCCCGGCCTT 61.968 63.158 0.00 0.00 0.00 4.35
131 132 1.221021 CTGTTCTACCCCGGCCTTC 59.779 63.158 0.00 0.00 0.00 3.46
132 133 1.229400 TGTTCTACCCCGGCCTTCT 60.229 57.895 0.00 0.00 0.00 2.85
133 134 1.262640 TGTTCTACCCCGGCCTTCTC 61.263 60.000 0.00 0.00 0.00 2.87
134 135 1.079621 TTCTACCCCGGCCTTCTCA 59.920 57.895 0.00 0.00 0.00 3.27
135 136 0.326238 TTCTACCCCGGCCTTCTCAT 60.326 55.000 0.00 0.00 0.00 2.90
136 137 1.048724 TCTACCCCGGCCTTCTCATG 61.049 60.000 0.00 0.00 0.00 3.07
137 138 2.044806 CTACCCCGGCCTTCTCATGG 62.045 65.000 0.00 0.00 0.00 3.66
138 139 2.833151 TACCCCGGCCTTCTCATGGT 62.833 60.000 0.00 0.00 0.00 3.55
139 140 2.677228 CCCGGCCTTCTCATGGTT 59.323 61.111 0.00 0.00 0.00 3.67
140 141 1.750399 CCCGGCCTTCTCATGGTTG 60.750 63.158 0.00 0.00 0.00 3.77
141 142 1.299648 CCGGCCTTCTCATGGTTGA 59.700 57.895 0.00 0.00 0.00 3.18
142 143 0.107017 CCGGCCTTCTCATGGTTGAT 60.107 55.000 0.00 0.00 0.00 2.57
143 144 1.303309 CGGCCTTCTCATGGTTGATC 58.697 55.000 0.00 0.00 0.00 2.92
144 145 1.303309 GGCCTTCTCATGGTTGATCG 58.697 55.000 0.00 0.00 0.00 3.69
145 146 1.407437 GGCCTTCTCATGGTTGATCGT 60.407 52.381 0.00 0.00 0.00 3.73
146 147 1.936547 GCCTTCTCATGGTTGATCGTC 59.063 52.381 0.00 0.00 0.00 4.20
147 148 2.419297 GCCTTCTCATGGTTGATCGTCT 60.419 50.000 0.00 0.00 0.00 4.18
148 149 3.452474 CCTTCTCATGGTTGATCGTCTC 58.548 50.000 0.00 0.00 0.00 3.36
149 150 2.851805 TCTCATGGTTGATCGTCTCG 57.148 50.000 0.00 0.00 0.00 4.04
150 151 2.092323 TCTCATGGTTGATCGTCTCGT 58.908 47.619 0.00 0.00 0.00 4.18
151 152 2.097629 TCTCATGGTTGATCGTCTCGTC 59.902 50.000 0.00 0.00 0.00 4.20
152 153 1.816224 TCATGGTTGATCGTCTCGTCA 59.184 47.619 0.00 0.00 0.00 4.35
153 154 2.230266 TCATGGTTGATCGTCTCGTCAA 59.770 45.455 0.00 0.00 32.31 3.18
156 157 0.982673 GTTGATCGTCTCGTCAACGG 59.017 55.000 15.36 0.00 43.08 4.44
157 158 0.731514 TTGATCGTCTCGTCAACGGC 60.732 55.000 2.31 0.00 40.45 5.68
158 159 2.202440 ATCGTCTCGTCAACGGCG 60.202 61.111 4.80 4.80 40.45 6.46
159 160 3.678717 ATCGTCTCGTCAACGGCGG 62.679 63.158 13.24 0.00 40.45 6.13
161 162 4.719369 GTCTCGTCAACGGCGGCT 62.719 66.667 13.24 0.00 40.29 5.52
162 163 4.415332 TCTCGTCAACGGCGGCTC 62.415 66.667 13.24 0.00 40.29 4.70
163 164 4.717629 CTCGTCAACGGCGGCTCA 62.718 66.667 13.24 0.00 40.29 4.26
164 165 4.717629 TCGTCAACGGCGGCTCAG 62.718 66.667 13.24 0.00 40.29 3.35
166 167 3.112709 GTCAACGGCGGCTCAGTC 61.113 66.667 13.24 0.00 0.00 3.51
167 168 4.373116 TCAACGGCGGCTCAGTCC 62.373 66.667 13.24 0.00 0.00 3.85
168 169 4.379243 CAACGGCGGCTCAGTCCT 62.379 66.667 13.24 0.00 0.00 3.85
169 170 2.678934 AACGGCGGCTCAGTCCTA 60.679 61.111 13.24 0.00 0.00 2.94
170 171 2.280552 AACGGCGGCTCAGTCCTAA 61.281 57.895 13.24 0.00 0.00 2.69
171 172 1.614241 AACGGCGGCTCAGTCCTAAT 61.614 55.000 13.24 0.00 0.00 1.73
172 173 1.592669 CGGCGGCTCAGTCCTAATG 60.593 63.158 7.61 0.00 0.00 1.90
173 174 1.889573 GGCGGCTCAGTCCTAATGC 60.890 63.158 0.00 0.00 0.00 3.56
174 175 1.144936 GCGGCTCAGTCCTAATGCT 59.855 57.895 0.00 0.00 0.00 3.79
175 176 0.462759 GCGGCTCAGTCCTAATGCTT 60.463 55.000 0.00 0.00 0.00 3.91
176 177 2.014068 GCGGCTCAGTCCTAATGCTTT 61.014 52.381 0.00 0.00 0.00 3.51
177 178 1.667724 CGGCTCAGTCCTAATGCTTTG 59.332 52.381 0.00 0.00 0.00 2.77
178 179 1.403323 GGCTCAGTCCTAATGCTTTGC 59.597 52.381 0.00 0.00 0.00 3.68
179 180 1.403323 GCTCAGTCCTAATGCTTTGCC 59.597 52.381 0.00 0.00 0.00 4.52
180 181 2.019984 CTCAGTCCTAATGCTTTGCCC 58.980 52.381 0.00 0.00 0.00 5.36
181 182 1.106285 CAGTCCTAATGCTTTGCCCC 58.894 55.000 0.00 0.00 0.00 5.80
182 183 0.704076 AGTCCTAATGCTTTGCCCCA 59.296 50.000 0.00 0.00 0.00 4.96
183 184 0.817654 GTCCTAATGCTTTGCCCCAC 59.182 55.000 0.00 0.00 0.00 4.61
184 185 0.324275 TCCTAATGCTTTGCCCCACC 60.324 55.000 0.00 0.00 0.00 4.61
185 186 0.324645 CCTAATGCTTTGCCCCACCT 60.325 55.000 0.00 0.00 0.00 4.00
186 187 1.106285 CTAATGCTTTGCCCCACCTC 58.894 55.000 0.00 0.00 0.00 3.85
187 188 0.324275 TAATGCTTTGCCCCACCTCC 60.324 55.000 0.00 0.00 0.00 4.30
188 189 2.384933 AATGCTTTGCCCCACCTCCA 62.385 55.000 0.00 0.00 0.00 3.86
189 190 2.037847 GCTTTGCCCCACCTCCAT 59.962 61.111 0.00 0.00 0.00 3.41
190 191 2.054453 GCTTTGCCCCACCTCCATC 61.054 63.158 0.00 0.00 0.00 3.51
191 192 1.693640 CTTTGCCCCACCTCCATCT 59.306 57.895 0.00 0.00 0.00 2.90
192 193 0.040204 CTTTGCCCCACCTCCATCTT 59.960 55.000 0.00 0.00 0.00 2.40
193 194 0.039618 TTTGCCCCACCTCCATCTTC 59.960 55.000 0.00 0.00 0.00 2.87
194 195 2.190578 GCCCCACCTCCATCTTCG 59.809 66.667 0.00 0.00 0.00 3.79
195 196 2.190578 CCCCACCTCCATCTTCGC 59.809 66.667 0.00 0.00 0.00 4.70
196 197 2.202932 CCCACCTCCATCTTCGCG 60.203 66.667 0.00 0.00 0.00 5.87
197 198 2.892425 CCACCTCCATCTTCGCGC 60.892 66.667 0.00 0.00 0.00 6.86
198 199 2.185350 CACCTCCATCTTCGCGCT 59.815 61.111 5.56 0.00 0.00 5.92
199 200 2.169789 CACCTCCATCTTCGCGCTG 61.170 63.158 5.56 0.00 0.00 5.18
200 201 2.185350 CCTCCATCTTCGCGCTGT 59.815 61.111 5.56 0.00 0.00 4.40
201 202 1.448540 CCTCCATCTTCGCGCTGTT 60.449 57.895 5.56 0.00 0.00 3.16
202 203 0.179111 CCTCCATCTTCGCGCTGTTA 60.179 55.000 5.56 0.00 0.00 2.41
203 204 1.203928 CTCCATCTTCGCGCTGTTAG 58.796 55.000 5.56 0.00 0.00 2.34
204 205 0.530744 TCCATCTTCGCGCTGTTAGT 59.469 50.000 5.56 0.00 0.00 2.24
205 206 1.746787 TCCATCTTCGCGCTGTTAGTA 59.253 47.619 5.56 0.00 0.00 1.82
206 207 1.852895 CCATCTTCGCGCTGTTAGTAC 59.147 52.381 5.56 0.00 0.00 2.73
207 208 2.526077 CATCTTCGCGCTGTTAGTACA 58.474 47.619 5.56 0.00 0.00 2.90
243 244 1.536907 TCACTTCCTAACCGGGCCA 60.537 57.895 6.32 0.00 0.00 5.36
255 256 4.047125 GGGCCAGGCTTAGGTGCA 62.047 66.667 12.43 0.00 34.04 4.57
262 263 2.418083 GGCTTAGGTGCATGTGGGC 61.418 63.158 0.00 0.00 34.04 5.36
323 324 4.783764 AAAGGATTTGCCGTAAAGAAGG 57.216 40.909 0.00 0.00 43.43 3.46
331 332 0.034477 CCGTAAAGAAGGCCCACCAT 60.034 55.000 0.00 0.00 39.06 3.55
339 340 2.833943 AGAAGGCCCACCATGATTTTTC 59.166 45.455 0.00 0.00 39.06 2.29
345 346 3.306019 GCCCACCATGATTTTTCTTCGTT 60.306 43.478 0.00 0.00 0.00 3.85
346 347 4.082463 GCCCACCATGATTTTTCTTCGTTA 60.082 41.667 0.00 0.00 0.00 3.18
401 402 5.159273 GATGAGGGGTATCATCCTTCTTC 57.841 47.826 5.57 0.00 46.57 2.87
402 403 4.286813 TGAGGGGTATCATCCTTCTTCT 57.713 45.455 0.00 0.00 32.74 2.85
403 404 4.227197 TGAGGGGTATCATCCTTCTTCTC 58.773 47.826 0.00 0.00 32.74 2.87
404 405 4.078336 TGAGGGGTATCATCCTTCTTCTCT 60.078 45.833 0.00 0.00 32.74 3.10
405 406 4.488770 AGGGGTATCATCCTTCTTCTCTC 58.511 47.826 0.00 0.00 0.00 3.20
406 407 3.257127 GGGGTATCATCCTTCTTCTCTCG 59.743 52.174 0.00 0.00 0.00 4.04
407 408 3.892588 GGGTATCATCCTTCTTCTCTCGT 59.107 47.826 0.00 0.00 0.00 4.18
408 409 4.261825 GGGTATCATCCTTCTTCTCTCGTG 60.262 50.000 0.00 0.00 0.00 4.35
409 410 4.580995 GGTATCATCCTTCTTCTCTCGTGA 59.419 45.833 0.00 0.00 0.00 4.35
410 411 4.916983 ATCATCCTTCTTCTCTCGTGAG 57.083 45.455 8.20 8.20 41.51 3.51
411 412 3.691575 TCATCCTTCTTCTCTCGTGAGT 58.308 45.455 13.77 0.00 40.98 3.41
412 413 4.844884 TCATCCTTCTTCTCTCGTGAGTA 58.155 43.478 13.77 4.15 40.98 2.59
413 414 5.441500 TCATCCTTCTTCTCTCGTGAGTAT 58.558 41.667 13.77 0.00 40.98 2.12
414 415 6.592870 TCATCCTTCTTCTCTCGTGAGTATA 58.407 40.000 13.77 0.00 40.98 1.47
415 416 6.483974 TCATCCTTCTTCTCTCGTGAGTATAC 59.516 42.308 13.77 0.00 40.98 1.47
416 417 5.124645 TCCTTCTTCTCTCGTGAGTATACC 58.875 45.833 13.77 0.00 40.98 2.73
417 418 5.104444 TCCTTCTTCTCTCGTGAGTATACCT 60.104 44.000 13.77 0.00 40.98 3.08
418 419 5.008217 CCTTCTTCTCTCGTGAGTATACCTG 59.992 48.000 13.77 1.49 40.98 4.00
419 420 4.452825 TCTTCTCTCGTGAGTATACCTGG 58.547 47.826 13.77 0.00 40.98 4.45
420 421 2.573369 TCTCTCGTGAGTATACCTGGC 58.427 52.381 13.77 0.00 40.98 4.85
421 422 1.609555 CTCTCGTGAGTATACCTGGCC 59.390 57.143 6.33 0.00 35.67 5.36
422 423 1.064240 TCTCGTGAGTATACCTGGCCA 60.064 52.381 4.71 4.71 0.00 5.36
423 424 1.964223 CTCGTGAGTATACCTGGCCAT 59.036 52.381 5.51 0.00 0.00 4.40
424 425 3.154710 CTCGTGAGTATACCTGGCCATA 58.845 50.000 5.51 0.00 0.00 2.74
425 426 2.889045 TCGTGAGTATACCTGGCCATAC 59.111 50.000 5.51 5.92 0.00 2.39
426 427 2.029290 CGTGAGTATACCTGGCCATACC 60.029 54.545 5.51 1.01 39.84 2.73
427 428 3.240302 GTGAGTATACCTGGCCATACCT 58.760 50.000 5.51 0.00 40.22 3.08
428 429 3.258622 GTGAGTATACCTGGCCATACCTC 59.741 52.174 5.51 6.89 40.22 3.85
429 430 2.492484 GAGTATACCTGGCCATACCTCG 59.508 54.545 5.51 0.00 40.22 4.63
430 431 1.549170 GTATACCTGGCCATACCTCGG 59.451 57.143 5.51 5.16 40.22 4.63
431 432 0.836400 ATACCTGGCCATACCTCGGG 60.836 60.000 5.51 4.26 40.22 5.14
455 456 4.451150 CTAGCCAAGCCCGACGCA 62.451 66.667 0.00 0.00 41.38 5.24
456 457 3.950794 CTAGCCAAGCCCGACGCAA 62.951 63.158 0.00 0.00 41.38 4.85
457 458 3.538785 TAGCCAAGCCCGACGCAAA 62.539 57.895 0.00 0.00 41.38 3.68
458 459 3.972276 GCCAAGCCCGACGCAAAA 61.972 61.111 0.00 0.00 41.38 2.44
459 460 2.725008 CCAAGCCCGACGCAAAAA 59.275 55.556 0.00 0.00 41.38 1.94
473 474 4.198087 AAAAACCCAGGCCTGAGC 57.802 55.556 34.91 0.00 38.76 4.26
527 528 4.376176 CCCGGCCCGAACACGTAA 62.376 66.667 3.71 0.00 0.00 3.18
528 529 2.357275 CCGGCCCGAACACGTAAA 60.357 61.111 3.71 0.00 0.00 2.01
529 530 1.960250 CCGGCCCGAACACGTAAAA 60.960 57.895 3.71 0.00 0.00 1.52
530 531 1.494189 CGGCCCGAACACGTAAAAG 59.506 57.895 0.00 0.00 0.00 2.27
531 532 1.208358 GGCCCGAACACGTAAAAGC 59.792 57.895 0.00 0.00 0.00 3.51
532 533 1.208358 GCCCGAACACGTAAAAGCC 59.792 57.895 0.00 0.00 0.00 4.35
533 534 1.871077 CCCGAACACGTAAAAGCCC 59.129 57.895 0.00 0.00 0.00 5.19
534 535 1.494189 CCGAACACGTAAAAGCCCG 59.506 57.895 0.00 0.00 0.00 6.13
535 536 1.223417 CCGAACACGTAAAAGCCCGT 61.223 55.000 0.00 0.00 37.90 5.28
536 537 0.162294 CGAACACGTAAAAGCCCGTC 59.838 55.000 0.00 0.00 34.59 4.79
537 538 0.514255 GAACACGTAAAAGCCCGTCC 59.486 55.000 0.00 0.00 34.59 4.79
538 539 1.223417 AACACGTAAAAGCCCGTCCG 61.223 55.000 0.00 0.00 34.59 4.79
539 540 2.047939 ACGTAAAAGCCCGTCCGG 60.048 61.111 0.00 0.00 30.05 5.14
569 570 3.702048 CCGGCCCGTCCTTCAGAA 61.702 66.667 0.85 0.00 0.00 3.02
570 571 2.345991 CGGCCCGTCCTTCAGAAA 59.654 61.111 0.00 0.00 0.00 2.52
571 572 1.302192 CGGCCCGTCCTTCAGAAAA 60.302 57.895 0.00 0.00 0.00 2.29
572 573 0.887387 CGGCCCGTCCTTCAGAAAAA 60.887 55.000 0.00 0.00 0.00 1.94
573 574 0.596577 GGCCCGTCCTTCAGAAAAAC 59.403 55.000 0.00 0.00 0.00 2.43
574 575 0.237498 GCCCGTCCTTCAGAAAAACG 59.763 55.000 9.14 9.14 0.00 3.60
575 576 0.237498 CCCGTCCTTCAGAAAAACGC 59.763 55.000 10.23 0.00 32.26 4.84
576 577 0.110823 CCGTCCTTCAGAAAAACGCG 60.111 55.000 3.53 3.53 32.26 6.01
577 578 0.856641 CGTCCTTCAGAAAAACGCGA 59.143 50.000 15.93 0.00 0.00 5.87
578 579 1.259507 CGTCCTTCAGAAAAACGCGAA 59.740 47.619 15.93 0.00 0.00 4.70
579 580 2.285950 CGTCCTTCAGAAAAACGCGAAA 60.286 45.455 15.93 0.00 0.00 3.46
580 581 3.687200 GTCCTTCAGAAAAACGCGAAAA 58.313 40.909 15.93 0.00 0.00 2.29
581 582 3.481028 GTCCTTCAGAAAAACGCGAAAAC 59.519 43.478 15.93 0.00 0.00 2.43
582 583 2.462565 CCTTCAGAAAAACGCGAAAACG 59.537 45.455 15.93 0.00 39.50 3.60
583 584 3.347443 CTTCAGAAAAACGCGAAAACGA 58.653 40.909 15.93 0.00 36.70 3.85
584 585 3.595709 TCAGAAAAACGCGAAAACGAT 57.404 38.095 15.93 0.00 36.70 3.73
585 586 3.284914 TCAGAAAAACGCGAAAACGATG 58.715 40.909 15.93 3.16 36.70 3.84
586 587 2.400408 CAGAAAAACGCGAAAACGATGG 59.600 45.455 15.93 0.00 36.70 3.51
587 588 1.711824 GAAAAACGCGAAAACGATGGG 59.288 47.619 15.93 0.00 36.70 4.00
588 589 0.662077 AAAACGCGAAAACGATGGGC 60.662 50.000 15.93 0.00 36.70 5.36
589 590 2.466520 AAACGCGAAAACGATGGGCC 62.467 55.000 15.93 0.00 36.70 5.80
590 591 4.174129 CGCGAAAACGATGGGCCC 62.174 66.667 17.59 17.59 34.06 5.80
591 592 4.174129 GCGAAAACGATGGGCCCG 62.174 66.667 19.37 7.98 0.00 6.13
592 593 3.505184 CGAAAACGATGGGCCCGG 61.505 66.667 19.37 11.81 0.00 5.73
593 594 3.138128 GAAAACGATGGGCCCGGG 61.138 66.667 19.09 19.09 0.00 5.73
623 624 4.371975 CGGTCTTCGGGCTCAAAA 57.628 55.556 0.00 0.00 34.75 2.44
624 625 2.854522 CGGTCTTCGGGCTCAAAAT 58.145 52.632 0.00 0.00 34.75 1.82
625 626 0.727398 CGGTCTTCGGGCTCAAAATC 59.273 55.000 0.00 0.00 34.75 2.17
626 627 1.676014 CGGTCTTCGGGCTCAAAATCT 60.676 52.381 0.00 0.00 34.75 2.40
627 628 2.418197 CGGTCTTCGGGCTCAAAATCTA 60.418 50.000 0.00 0.00 34.75 1.98
628 629 3.198872 GGTCTTCGGGCTCAAAATCTAG 58.801 50.000 0.00 0.00 0.00 2.43
629 630 3.198872 GTCTTCGGGCTCAAAATCTAGG 58.801 50.000 0.00 0.00 0.00 3.02
630 631 1.943340 CTTCGGGCTCAAAATCTAGGC 59.057 52.381 0.00 0.00 37.55 3.93
633 634 2.707902 GGCTCAAAATCTAGGCCCG 58.292 57.895 0.00 0.00 37.12 6.13
634 635 0.180406 GGCTCAAAATCTAGGCCCGA 59.820 55.000 0.00 0.00 37.12 5.14
635 636 1.587547 GCTCAAAATCTAGGCCCGAG 58.412 55.000 0.00 0.00 0.00 4.63
636 637 1.587547 CTCAAAATCTAGGCCCGAGC 58.412 55.000 0.00 0.00 38.76 5.03
681 682 3.263941 CCGGGTCAGGCTTTTTCG 58.736 61.111 0.00 0.00 0.00 3.46
682 683 2.332654 CCGGGTCAGGCTTTTTCGG 61.333 63.158 0.00 2.50 0.00 4.30
683 684 2.332654 CGGGTCAGGCTTTTTCGGG 61.333 63.158 0.00 0.00 0.00 5.14
684 685 2.636412 GGGTCAGGCTTTTTCGGGC 61.636 63.158 0.00 0.00 0.00 6.13
778 780 2.028631 GGCCCAGTACGTATCCGC 59.971 66.667 0.00 0.00 37.70 5.54
804 814 0.037697 TCCGTGGTCCTCAATCAACG 60.038 55.000 0.00 0.00 0.00 4.10
894 904 1.733041 CGGTCGCACCACACTACTG 60.733 63.158 6.21 0.00 38.47 2.74
1004 1066 1.077501 CGTGCCAAGGATCCATGGT 60.078 57.895 31.36 1.31 37.16 3.55
1070 1132 0.898320 CCCTTCACTGGACAGACGAT 59.102 55.000 6.29 0.00 0.00 3.73
1247 1555 5.008613 AGTTGCAGTTGATTAATTCGTGTGT 59.991 36.000 0.00 0.00 0.00 3.72
1265 1573 3.706086 TGTGTATCAGGAATCTGCTGCTA 59.294 43.478 0.00 0.00 40.69 3.49
1297 1608 3.063725 TGCCAAAACGCACCGTATATAAC 59.936 43.478 0.00 0.00 39.99 1.89
1434 1747 3.132289 GGGGTAATCGATCAGTCAGTCAA 59.868 47.826 0.00 0.00 0.00 3.18
1435 1748 4.382685 GGGGTAATCGATCAGTCAGTCAAA 60.383 45.833 0.00 0.00 0.00 2.69
1440 1753 6.808008 AATCGATCAGTCAGTCAAACAAAT 57.192 33.333 0.00 0.00 0.00 2.32
1460 1775 8.099364 ACAAATATAAATTCTGGTCCATAGCG 57.901 34.615 0.00 0.00 0.00 4.26
1475 1790 1.315981 TAGCGGACCTCACAGCTCAG 61.316 60.000 0.00 0.00 41.07 3.35
1481 1796 2.353208 GGACCTCACAGCTCAGTTGTAG 60.353 54.545 0.00 0.00 0.00 2.74
1492 1807 7.645735 CACAGCTCAGTTGTAGTACTATGTATG 59.354 40.741 5.75 4.14 0.00 2.39
1508 1823 8.694975 ACTATGTATGTTCTAATCGATCATGC 57.305 34.615 0.00 1.75 35.95 4.06
1513 1828 3.429881 TGTTCTAATCGATCATGCGCATC 59.570 43.478 22.51 9.99 0.00 3.91
1589 1912 1.471119 CTGCTGCATGGGATGTCTTT 58.529 50.000 1.31 0.00 0.00 2.52
1635 1963 5.557891 GGTATGCCACCGTATACTAGTAG 57.442 47.826 8.85 0.00 37.62 2.57
1637 1965 5.707298 GGTATGCCACCGTATACTAGTAGAA 59.293 44.000 8.85 0.00 37.62 2.10
1638 1966 6.376581 GGTATGCCACCGTATACTAGTAGAAT 59.623 42.308 8.85 0.00 37.62 2.40
1639 1967 7.554118 GGTATGCCACCGTATACTAGTAGAATA 59.446 40.741 8.85 0.00 37.62 1.75
1640 1968 6.808008 TGCCACCGTATACTAGTAGAATAC 57.192 41.667 8.85 6.49 43.47 1.89
1641 1969 6.298361 TGCCACCGTATACTAGTAGAATACA 58.702 40.000 8.85 0.00 46.26 2.29
1642 1970 6.429078 TGCCACCGTATACTAGTAGAATACAG 59.571 42.308 8.85 2.84 46.26 2.74
1643 1971 6.429385 GCCACCGTATACTAGTAGAATACAGT 59.571 42.308 8.85 3.44 46.26 3.55
1644 1972 7.604164 GCCACCGTATACTAGTAGAATACAGTA 59.396 40.741 8.85 0.00 46.26 2.74
1645 1973 8.930760 CCACCGTATACTAGTAGAATACAGTAC 58.069 40.741 8.85 2.85 46.26 2.73
1668 1996 2.188469 CCAGGCCCAAATGCATGC 59.812 61.111 11.82 11.82 41.45 4.06
1669 1997 2.202824 CAGGCCCAAATGCATGCG 60.203 61.111 14.09 0.00 36.14 4.73
1672 2000 2.262292 GCCCAAATGCATGCGTGT 59.738 55.556 14.40 4.56 0.00 4.49
1952 2293 6.262273 TGTGTCTCCTATGTTTTCTGTTTTCC 59.738 38.462 0.00 0.00 0.00 3.13
1976 2658 8.579006 TCCCAACCAAATATATAGTACGTACAG 58.421 37.037 26.55 5.57 0.00 2.74
1997 2679 1.001048 TGCATTTTCAGCTCTGTGTGC 60.001 47.619 3.63 3.63 0.00 4.57
2126 2811 6.023357 GAGTAAATTATACTCCCTCCGTCC 57.977 45.833 12.87 0.00 38.33 4.79
2127 2812 4.837298 AGTAAATTATACTCCCTCCGTCCC 59.163 45.833 0.00 0.00 0.00 4.46
2128 2813 3.339713 AATTATACTCCCTCCGTCCCA 57.660 47.619 0.00 0.00 0.00 4.37
2129 2814 2.852714 TTATACTCCCTCCGTCCCAA 57.147 50.000 0.00 0.00 0.00 4.12
2130 2815 2.852714 TATACTCCCTCCGTCCCAAA 57.147 50.000 0.00 0.00 0.00 3.28
2131 2816 1.961133 ATACTCCCTCCGTCCCAAAA 58.039 50.000 0.00 0.00 0.00 2.44
2132 2817 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
2133 2818 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
2134 2819 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
2135 2820 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
2136 2821 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
2137 2822 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
2138 2823 2.026636 CCCTCCGTCCCAAAATAAGTGA 60.027 50.000 0.00 0.00 0.00 3.41
2139 2824 3.007635 CCTCCGTCCCAAAATAAGTGAC 58.992 50.000 0.00 0.00 0.00 3.67
2140 2825 3.307480 CCTCCGTCCCAAAATAAGTGACT 60.307 47.826 0.00 0.00 0.00 3.41
2141 2826 3.933332 CTCCGTCCCAAAATAAGTGACTC 59.067 47.826 0.00 0.00 0.00 3.36
2142 2827 3.325425 TCCGTCCCAAAATAAGTGACTCA 59.675 43.478 0.00 0.00 0.00 3.41
2143 2828 4.069304 CCGTCCCAAAATAAGTGACTCAA 58.931 43.478 0.00 0.00 0.00 3.02
2144 2829 4.700213 CCGTCCCAAAATAAGTGACTCAAT 59.300 41.667 0.00 0.00 0.00 2.57
2145 2830 5.183140 CCGTCCCAAAATAAGTGACTCAATT 59.817 40.000 0.00 0.00 0.00 2.32
2146 2831 6.294508 CCGTCCCAAAATAAGTGACTCAATTT 60.295 38.462 0.00 0.00 0.00 1.82
2147 2832 7.145323 CGTCCCAAAATAAGTGACTCAATTTT 58.855 34.615 10.89 10.89 33.07 1.82
2148 2833 8.293867 CGTCCCAAAATAAGTGACTCAATTTTA 58.706 33.333 14.43 2.50 31.97 1.52
2203 2888 6.405278 AAAGTTGAGTCACTTATTTTGGGG 57.595 37.500 0.00 0.00 35.87 4.96
2204 2889 5.319043 AGTTGAGTCACTTATTTTGGGGA 57.681 39.130 0.00 0.00 0.00 4.81
2205 2890 5.070685 AGTTGAGTCACTTATTTTGGGGAC 58.929 41.667 0.00 0.00 0.00 4.46
2206 2891 3.670625 TGAGTCACTTATTTTGGGGACG 58.329 45.455 0.00 0.00 0.00 4.79
2207 2892 3.007635 GAGTCACTTATTTTGGGGACGG 58.992 50.000 0.00 0.00 0.00 4.79
2208 2893 2.640826 AGTCACTTATTTTGGGGACGGA 59.359 45.455 0.00 0.00 0.00 4.69
2209 2894 3.007635 GTCACTTATTTTGGGGACGGAG 58.992 50.000 0.00 0.00 0.00 4.63
2210 2895 2.026636 TCACTTATTTTGGGGACGGAGG 60.027 50.000 0.00 0.00 0.00 4.30
2211 2896 1.283905 ACTTATTTTGGGGACGGAGGG 59.716 52.381 0.00 0.00 0.00 4.30
2212 2897 1.562475 CTTATTTTGGGGACGGAGGGA 59.438 52.381 0.00 0.00 0.00 4.20
2213 2898 1.209621 TATTTTGGGGACGGAGGGAG 58.790 55.000 0.00 0.00 0.00 4.30
2214 2899 0.845102 ATTTTGGGGACGGAGGGAGT 60.845 55.000 0.00 0.00 0.00 3.85
2281 3008 5.920273 GTGTTGATTCCATGGTTGTTTAGTG 59.080 40.000 12.58 0.00 0.00 2.74
2285 3012 5.943416 TGATTCCATGGTTGTTTAGTGTAGG 59.057 40.000 12.58 0.00 0.00 3.18
2286 3013 4.295141 TCCATGGTTGTTTAGTGTAGGG 57.705 45.455 12.58 0.00 0.00 3.53
2316 3043 8.625786 TTTTTCAGGGAGGTTGTTTAGTATAC 57.374 34.615 0.00 0.00 0.00 1.47
2317 3044 7.563724 TTTCAGGGAGGTTGTTTAGTATACT 57.436 36.000 10.87 10.87 0.00 2.12
2318 3045 8.669055 TTTCAGGGAGGTTGTTTAGTATACTA 57.331 34.615 8.59 8.59 0.00 1.82
2388 3115 0.613260 TTCATCCAAGACACGAGGGG 59.387 55.000 0.00 0.00 0.00 4.79
2389 3116 1.450312 CATCCAAGACACGAGGGGC 60.450 63.158 0.00 0.00 0.00 5.80
2391 3118 3.691342 CCAAGACACGAGGGGCGA 61.691 66.667 0.00 0.00 44.57 5.54
2392 3119 2.432628 CAAGACACGAGGGGCGAC 60.433 66.667 0.00 0.00 44.57 5.19
2393 3120 2.915659 AAGACACGAGGGGCGACA 60.916 61.111 0.00 0.00 44.57 4.35
2394 3121 2.504274 AAGACACGAGGGGCGACAA 61.504 57.895 0.00 0.00 44.57 3.18
2395 3122 2.432628 GACACGAGGGGCGACAAG 60.433 66.667 0.00 0.00 44.57 3.16
2396 3123 3.934391 GACACGAGGGGCGACAAGG 62.934 68.421 0.00 0.00 44.57 3.61
2511 3238 8.074370 GTGTAAAATTTAAGACTTGACCTGTCC 58.926 37.037 0.00 0.00 35.21 4.02
2512 3239 7.776030 TGTAAAATTTAAGACTTGACCTGTCCA 59.224 33.333 0.00 0.00 35.21 4.02
2513 3240 7.839680 AAAATTTAAGACTTGACCTGTCCAT 57.160 32.000 0.00 0.00 35.21 3.41
2516 3243 5.762179 TTAAGACTTGACCTGTCCATCAT 57.238 39.130 0.00 0.00 35.21 2.45
2517 3244 3.623906 AGACTTGACCTGTCCATCATG 57.376 47.619 0.00 0.00 35.21 3.07
2518 3245 3.176411 AGACTTGACCTGTCCATCATGA 58.824 45.455 0.00 0.00 35.21 3.07
2519 3246 3.584406 AGACTTGACCTGTCCATCATGAA 59.416 43.478 0.00 0.00 35.21 2.57
2520 3247 3.937706 GACTTGACCTGTCCATCATGAAG 59.062 47.826 0.00 0.00 0.00 3.02
2521 3248 3.276857 CTTGACCTGTCCATCATGAAGG 58.723 50.000 10.84 10.84 0.00 3.46
2522 3249 2.550175 TGACCTGTCCATCATGAAGGA 58.450 47.619 15.63 15.63 0.00 3.36
2523 3250 3.117745 TGACCTGTCCATCATGAAGGAT 58.882 45.455 21.82 6.73 36.11 3.24
2524 3251 4.297768 TGACCTGTCCATCATGAAGGATA 58.702 43.478 21.82 18.06 36.11 2.59
2525 3252 4.101585 TGACCTGTCCATCATGAAGGATAC 59.898 45.833 21.82 11.71 36.11 2.24
2550 3277 3.313249 TGCTTGATCGCCACTTCATAATG 59.687 43.478 0.00 0.00 0.00 1.90
2557 3284 3.809279 TCGCCACTTCATAATGTGCATAG 59.191 43.478 0.00 0.00 33.26 2.23
2558 3285 3.561310 CGCCACTTCATAATGTGCATAGT 59.439 43.478 0.00 0.00 33.26 2.12
2559 3286 4.749598 CGCCACTTCATAATGTGCATAGTA 59.250 41.667 0.00 0.00 33.26 1.82
2566 3293 1.299541 AATGTGCATAGTACGCAGCC 58.700 50.000 0.00 0.00 40.78 4.85
2598 3331 2.092681 CAGTGTACTACGTAGCGTCGAA 59.907 50.000 22.40 0.00 41.54 3.71
2611 3344 1.193874 GCGTCGAACGATTTTGAAGGT 59.806 47.619 10.82 0.00 46.05 3.50
2620 3353 4.259356 ACGATTTTGAAGGTTAGCCTACC 58.741 43.478 0.00 0.00 46.33 3.18
2632 3365 5.665812 AGGTTAGCCTACCTGTATCAATCAA 59.334 40.000 6.56 0.00 46.71 2.57
2633 3366 6.330250 AGGTTAGCCTACCTGTATCAATCAAT 59.670 38.462 6.56 0.00 46.71 2.57
2634 3367 6.651225 GGTTAGCCTACCTGTATCAATCAATC 59.349 42.308 0.00 0.00 35.23 2.67
2797 3533 2.816087 CAGGATCACCTTGGTTGACTTG 59.184 50.000 0.00 0.00 45.36 3.16
2829 3565 2.042162 AGAAGAATGGGTGCCACTGAAT 59.958 45.455 0.00 0.00 35.80 2.57
2836 3572 3.088532 TGGGTGCCACTGAATATTTCAC 58.911 45.455 0.00 0.00 35.46 3.18
2861 3598 0.178301 GCCACTAGTAGCACCTTCCC 59.822 60.000 8.52 0.00 0.00 3.97
2864 3601 2.457598 CACTAGTAGCACCTTCCCTCA 58.542 52.381 0.00 0.00 0.00 3.86
2941 3805 2.315925 TGCCAGCTAGCAATCTACAC 57.684 50.000 18.83 0.00 40.56 2.90
2942 3806 1.833630 TGCCAGCTAGCAATCTACACT 59.166 47.619 18.83 0.00 40.56 3.55
2943 3807 3.031013 TGCCAGCTAGCAATCTACACTA 58.969 45.455 18.83 0.00 40.56 2.74
2944 3808 3.181475 TGCCAGCTAGCAATCTACACTAC 60.181 47.826 18.83 0.00 40.56 2.73
2945 3809 3.068873 GCCAGCTAGCAATCTACACTACT 59.931 47.826 18.83 0.00 0.00 2.57
2946 3810 4.278669 GCCAGCTAGCAATCTACACTACTA 59.721 45.833 18.83 0.00 0.00 1.82
2947 3811 5.563867 GCCAGCTAGCAATCTACACTACTAG 60.564 48.000 18.83 0.00 0.00 2.57
2962 3826 5.875359 ACACTACTAGCACTCCTTAATTTGC 59.125 40.000 0.00 0.00 35.08 3.68
2989 3853 7.614583 AGTGCTACTTAATCACTGGAGTAGTAA 59.385 37.037 10.12 0.00 42.13 2.24
2999 3866 6.640518 TCACTGGAGTAGTAAGCTTATTTGG 58.359 40.000 9.88 0.00 37.60 3.28
3004 3871 8.313944 TGGAGTAGTAAGCTTATTTGGTGATA 57.686 34.615 9.88 0.00 0.00 2.15
3073 3946 2.164422 TCATACATGGATCGATCTCGGC 59.836 50.000 23.96 8.74 40.29 5.54
3076 3949 1.013005 CATGGATCGATCTCGGCTGC 61.013 60.000 23.96 6.97 40.29 5.25
3093 3966 2.670229 GCTGCAGTACTACGCACACTAA 60.670 50.000 16.64 0.00 33.75 2.24
3097 3970 3.722780 GCAGTACTACGCACACTAATACG 59.277 47.826 0.00 0.00 0.00 3.06
3311 4188 6.726258 TCACACAGTACTTGAGCAATTATG 57.274 37.500 10.71 0.00 0.00 1.90
3314 4191 6.593770 CACACAGTACTTGAGCAATTATGGTA 59.406 38.462 10.71 0.00 37.41 3.25
3318 4200 8.730680 ACAGTACTTGAGCAATTATGGTAAAAG 58.269 33.333 0.00 0.00 37.41 2.27
3606 4488 1.691196 TGAACAGCCTCCCACAAAAG 58.309 50.000 0.00 0.00 0.00 2.27
3678 4560 1.453745 CCCACCGCATAAGGCACAT 60.454 57.895 0.00 0.00 45.17 3.21
3792 4676 2.121538 GCCATCGCTTCCTTTCCCC 61.122 63.158 0.00 0.00 0.00 4.81
3817 4701 1.753930 TGGGTCGATCTGTAGCGTAA 58.246 50.000 0.00 0.00 35.58 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.145667 AGGATGATTAGAGGGGAGGACAT 59.854 47.826 0.00 0.00 0.00 3.06
1 2 2.524440 AGGATGATTAGAGGGGAGGACA 59.476 50.000 0.00 0.00 0.00 4.02
2 3 3.268034 AGGATGATTAGAGGGGAGGAC 57.732 52.381 0.00 0.00 0.00 3.85
3 4 3.472848 AGAAGGATGATTAGAGGGGAGGA 59.527 47.826 0.00 0.00 0.00 3.71
4 5 3.837731 GAGAAGGATGATTAGAGGGGAGG 59.162 52.174 0.00 0.00 0.00 4.30
5 6 4.527816 CAGAGAAGGATGATTAGAGGGGAG 59.472 50.000 0.00 0.00 0.00 4.30
6 7 4.170845 TCAGAGAAGGATGATTAGAGGGGA 59.829 45.833 0.00 0.00 0.00 4.81
7 8 4.487804 TCAGAGAAGGATGATTAGAGGGG 58.512 47.826 0.00 0.00 0.00 4.79
8 9 5.543405 ACATCAGAGAAGGATGATTAGAGGG 59.457 44.000 9.18 0.00 43.80 4.30
9 10 6.570186 CGACATCAGAGAAGGATGATTAGAGG 60.570 46.154 9.18 0.00 43.80 3.69
10 11 6.380995 CGACATCAGAGAAGGATGATTAGAG 58.619 44.000 9.18 0.00 43.80 2.43
11 12 5.242615 CCGACATCAGAGAAGGATGATTAGA 59.757 44.000 9.18 0.00 43.80 2.10
12 13 5.010516 ACCGACATCAGAGAAGGATGATTAG 59.989 44.000 9.18 0.00 43.80 1.73
13 14 4.895889 ACCGACATCAGAGAAGGATGATTA 59.104 41.667 9.18 0.00 43.80 1.75
14 15 3.708631 ACCGACATCAGAGAAGGATGATT 59.291 43.478 9.18 0.00 43.80 2.57
15 16 3.069300 CACCGACATCAGAGAAGGATGAT 59.931 47.826 9.18 0.00 43.80 2.45
16 17 2.428530 CACCGACATCAGAGAAGGATGA 59.571 50.000 9.18 0.00 43.80 2.92
17 18 2.428530 TCACCGACATCAGAGAAGGATG 59.571 50.000 0.00 0.00 45.93 3.51
18 19 2.428890 GTCACCGACATCAGAGAAGGAT 59.571 50.000 0.00 0.00 32.09 3.24
19 20 1.819288 GTCACCGACATCAGAGAAGGA 59.181 52.381 0.00 0.00 32.09 3.36
20 21 1.134965 GGTCACCGACATCAGAGAAGG 60.135 57.143 0.00 0.00 33.68 3.46
21 22 2.285827 GGTCACCGACATCAGAGAAG 57.714 55.000 0.00 0.00 33.68 2.85
35 36 2.813908 GATGCGGGTGTCGGTCAC 60.814 66.667 0.00 0.00 45.47 3.67
36 37 4.077184 GGATGCGGGTGTCGGTCA 62.077 66.667 0.00 0.00 39.69 4.02
37 38 3.385749 ATGGATGCGGGTGTCGGTC 62.386 63.158 0.00 0.00 39.69 4.79
38 39 3.385749 GATGGATGCGGGTGTCGGT 62.386 63.158 0.00 0.00 39.69 4.69
39 40 2.588877 GATGGATGCGGGTGTCGG 60.589 66.667 0.00 0.00 39.69 4.79
40 41 2.588877 GGATGGATGCGGGTGTCG 60.589 66.667 0.00 0.00 42.76 4.35
41 42 2.203209 GGGATGGATGCGGGTGTC 60.203 66.667 0.00 0.00 0.00 3.67
42 43 3.809013 GGGGATGGATGCGGGTGT 61.809 66.667 0.00 0.00 0.00 4.16
43 44 3.137385 ATGGGGATGGATGCGGGTG 62.137 63.158 0.00 0.00 0.00 4.61
44 45 2.778278 ATGGGGATGGATGCGGGT 60.778 61.111 0.00 0.00 0.00 5.28
45 46 2.034687 GATGGGGATGGATGCGGG 59.965 66.667 0.00 0.00 0.00 6.13
46 47 1.601759 GTGATGGGGATGGATGCGG 60.602 63.158 0.00 0.00 0.00 5.69
47 48 1.962822 CGTGATGGGGATGGATGCG 60.963 63.158 0.00 0.00 0.00 4.73
48 49 0.886490 GACGTGATGGGGATGGATGC 60.886 60.000 0.00 0.00 0.00 3.91
49 50 0.250467 GGACGTGATGGGGATGGATG 60.250 60.000 0.00 0.00 0.00 3.51
50 51 0.694105 TGGACGTGATGGGGATGGAT 60.694 55.000 0.00 0.00 0.00 3.41
51 52 1.306568 TGGACGTGATGGGGATGGA 60.307 57.895 0.00 0.00 0.00 3.41
52 53 1.153168 GTGGACGTGATGGGGATGG 60.153 63.158 0.00 0.00 0.00 3.51
53 54 1.521457 CGTGGACGTGATGGGGATG 60.521 63.158 0.00 0.00 34.11 3.51
54 55 2.900273 CGTGGACGTGATGGGGAT 59.100 61.111 0.00 0.00 34.11 3.85
55 56 4.077184 GCGTGGACGTGATGGGGA 62.077 66.667 0.00 0.00 42.22 4.81
58 59 4.082523 AGGGCGTGGACGTGATGG 62.083 66.667 0.00 0.00 42.22 3.51
59 60 2.509336 GAGGGCGTGGACGTGATG 60.509 66.667 0.00 0.00 42.22 3.07
60 61 2.579657 TTGAGGGCGTGGACGTGAT 61.580 57.895 0.00 0.00 42.22 3.06
61 62 3.228017 TTGAGGGCGTGGACGTGA 61.228 61.111 0.00 0.00 42.22 4.35
62 63 3.041940 GTTGAGGGCGTGGACGTG 61.042 66.667 0.00 0.00 42.22 4.49
63 64 2.879233 ATGTTGAGGGCGTGGACGT 61.879 57.895 0.52 0.00 42.22 4.34
64 65 2.047274 ATGTTGAGGGCGTGGACG 60.047 61.111 0.00 0.00 43.27 4.79
65 66 2.690778 GCATGTTGAGGGCGTGGAC 61.691 63.158 0.00 0.00 0.00 4.02
66 67 2.359850 GCATGTTGAGGGCGTGGA 60.360 61.111 0.00 0.00 0.00 4.02
67 68 3.803082 CGCATGTTGAGGGCGTGG 61.803 66.667 0.00 0.00 45.27 4.94
71 72 4.166011 GCGACGCATGTTGAGGGC 62.166 66.667 16.42 0.00 0.00 5.19
72 73 3.499737 GGCGACGCATGTTGAGGG 61.500 66.667 23.09 0.00 0.00 4.30
87 88 4.752879 TTGGTGACTAGCCGCGGC 62.753 66.667 42.34 42.34 42.33 6.53
88 89 1.024579 AAATTGGTGACTAGCCGCGG 61.025 55.000 24.05 24.05 0.00 6.46
89 90 0.373716 GAAATTGGTGACTAGCCGCG 59.626 55.000 0.00 0.00 0.00 6.46
90 91 0.373716 CGAAATTGGTGACTAGCCGC 59.626 55.000 0.00 0.00 0.00 6.53
91 92 0.373716 GCGAAATTGGTGACTAGCCG 59.626 55.000 0.00 0.00 0.00 5.52
92 93 0.733150 GGCGAAATTGGTGACTAGCC 59.267 55.000 0.00 0.00 36.32 3.93
93 94 0.373716 CGGCGAAATTGGTGACTAGC 59.626 55.000 0.00 0.00 0.00 3.42
94 95 0.373716 GCGGCGAAATTGGTGACTAG 59.626 55.000 12.98 0.00 0.00 2.57
95 96 0.036765 AGCGGCGAAATTGGTGACTA 60.037 50.000 12.98 0.00 0.00 2.59
96 97 1.302511 AGCGGCGAAATTGGTGACT 60.303 52.632 12.98 0.00 0.00 3.41
97 98 1.154225 CAGCGGCGAAATTGGTGAC 60.154 57.895 12.98 0.00 33.11 3.67
98 99 1.169661 AACAGCGGCGAAATTGGTGA 61.170 50.000 12.98 0.00 35.25 4.02
99 100 0.729140 GAACAGCGGCGAAATTGGTG 60.729 55.000 12.98 0.00 37.16 4.17
100 101 0.889186 AGAACAGCGGCGAAATTGGT 60.889 50.000 12.98 0.32 0.00 3.67
101 102 1.083489 TAGAACAGCGGCGAAATTGG 58.917 50.000 12.98 0.00 0.00 3.16
102 103 1.202031 GGTAGAACAGCGGCGAAATTG 60.202 52.381 12.98 5.27 0.00 2.32
103 104 1.084289 GGTAGAACAGCGGCGAAATT 58.916 50.000 12.98 0.00 0.00 1.82
104 105 0.743345 GGGTAGAACAGCGGCGAAAT 60.743 55.000 12.98 0.00 0.00 2.17
105 106 1.375013 GGGTAGAACAGCGGCGAAA 60.375 57.895 12.98 0.00 0.00 3.46
106 107 2.263540 GGGTAGAACAGCGGCGAA 59.736 61.111 12.98 0.00 0.00 4.70
107 108 3.766691 GGGGTAGAACAGCGGCGA 61.767 66.667 12.98 0.00 0.00 5.54
109 110 4.832608 CCGGGGTAGAACAGCGGC 62.833 72.222 0.00 0.00 0.00 6.53
110 111 4.832608 GCCGGGGTAGAACAGCGG 62.833 72.222 2.18 0.00 0.00 5.52
111 112 4.832608 GGCCGGGGTAGAACAGCG 62.833 72.222 2.18 0.00 0.00 5.18
112 113 2.871216 GAAGGCCGGGGTAGAACAGC 62.871 65.000 2.18 0.00 0.00 4.40
113 114 1.221021 GAAGGCCGGGGTAGAACAG 59.779 63.158 2.18 0.00 0.00 3.16
114 115 1.229400 AGAAGGCCGGGGTAGAACA 60.229 57.895 2.18 0.00 0.00 3.18
115 116 1.262640 TGAGAAGGCCGGGGTAGAAC 61.263 60.000 2.18 0.00 0.00 3.01
116 117 0.326238 ATGAGAAGGCCGGGGTAGAA 60.326 55.000 2.18 0.00 0.00 2.10
117 118 1.048724 CATGAGAAGGCCGGGGTAGA 61.049 60.000 2.18 0.00 0.00 2.59
118 119 1.447643 CATGAGAAGGCCGGGGTAG 59.552 63.158 2.18 0.00 0.00 3.18
119 120 2.070039 CCATGAGAAGGCCGGGGTA 61.070 63.158 2.18 0.00 0.00 3.69
120 121 3.411517 CCATGAGAAGGCCGGGGT 61.412 66.667 2.18 0.00 0.00 4.95
121 122 2.983879 AACCATGAGAAGGCCGGGG 61.984 63.158 2.18 0.00 0.00 5.73
122 123 1.750399 CAACCATGAGAAGGCCGGG 60.750 63.158 2.18 0.00 0.00 5.73
123 124 0.107017 ATCAACCATGAGAAGGCCGG 60.107 55.000 0.00 0.00 39.39 6.13
124 125 1.303309 GATCAACCATGAGAAGGCCG 58.697 55.000 0.00 0.00 39.39 6.13
125 126 1.303309 CGATCAACCATGAGAAGGCC 58.697 55.000 0.00 0.00 39.39 5.19
126 127 1.936547 GACGATCAACCATGAGAAGGC 59.063 52.381 0.00 0.00 39.39 4.35
127 128 3.452474 GAGACGATCAACCATGAGAAGG 58.548 50.000 0.00 0.00 39.39 3.46
128 129 3.111838 CGAGACGATCAACCATGAGAAG 58.888 50.000 0.00 0.00 39.39 2.85
129 130 2.492088 ACGAGACGATCAACCATGAGAA 59.508 45.455 0.00 0.00 39.39 2.87
130 131 2.092323 ACGAGACGATCAACCATGAGA 58.908 47.619 0.00 0.00 39.39 3.27
131 132 2.159379 TGACGAGACGATCAACCATGAG 60.159 50.000 0.00 0.00 39.39 2.90
132 133 1.816224 TGACGAGACGATCAACCATGA 59.184 47.619 0.00 0.00 40.57 3.07
133 134 2.278026 TGACGAGACGATCAACCATG 57.722 50.000 0.00 0.00 0.00 3.66
134 135 2.607187 GTTGACGAGACGATCAACCAT 58.393 47.619 18.58 0.00 45.90 3.55
135 136 2.060326 GTTGACGAGACGATCAACCA 57.940 50.000 18.58 0.00 45.90 3.67
138 139 0.731514 GCCGTTGACGAGACGATCAA 60.732 55.000 4.91 0.00 42.82 2.57
139 140 1.154093 GCCGTTGACGAGACGATCA 60.154 57.895 4.91 0.00 42.82 2.92
140 141 2.215604 CGCCGTTGACGAGACGATC 61.216 63.158 4.91 0.00 42.82 3.69
141 142 2.202440 CGCCGTTGACGAGACGAT 60.202 61.111 4.91 0.00 42.82 3.73
142 143 4.394078 CCGCCGTTGACGAGACGA 62.394 66.667 4.91 0.00 42.82 4.20
144 145 4.719369 AGCCGCCGTTGACGAGAC 62.719 66.667 4.91 0.00 43.02 3.36
145 146 4.415332 GAGCCGCCGTTGACGAGA 62.415 66.667 4.91 0.00 43.02 4.04
146 147 4.717629 TGAGCCGCCGTTGACGAG 62.718 66.667 4.91 0.00 43.02 4.18
147 148 4.717629 CTGAGCCGCCGTTGACGA 62.718 66.667 4.91 0.00 43.02 4.20
149 150 3.112709 GACTGAGCCGCCGTTGAC 61.113 66.667 0.00 0.00 0.00 3.18
150 151 4.373116 GGACTGAGCCGCCGTTGA 62.373 66.667 0.00 0.00 0.00 3.18
151 152 2.501223 TTAGGACTGAGCCGCCGTTG 62.501 60.000 0.00 0.00 0.00 4.10
152 153 1.614241 ATTAGGACTGAGCCGCCGTT 61.614 55.000 0.00 0.00 0.00 4.44
153 154 2.058595 ATTAGGACTGAGCCGCCGT 61.059 57.895 0.00 0.00 0.00 5.68
154 155 1.592669 CATTAGGACTGAGCCGCCG 60.593 63.158 0.00 0.00 0.00 6.46
155 156 1.889573 GCATTAGGACTGAGCCGCC 60.890 63.158 0.00 0.00 0.00 6.13
156 157 0.462759 AAGCATTAGGACTGAGCCGC 60.463 55.000 0.00 0.00 0.00 6.53
157 158 1.667724 CAAAGCATTAGGACTGAGCCG 59.332 52.381 0.00 0.00 0.00 5.52
158 159 1.403323 GCAAAGCATTAGGACTGAGCC 59.597 52.381 0.00 0.00 0.00 4.70
159 160 1.403323 GGCAAAGCATTAGGACTGAGC 59.597 52.381 0.00 0.00 0.00 4.26
160 161 2.019984 GGGCAAAGCATTAGGACTGAG 58.980 52.381 0.00 0.00 0.00 3.35
161 162 1.340991 GGGGCAAAGCATTAGGACTGA 60.341 52.381 0.00 0.00 0.00 3.41
162 163 1.106285 GGGGCAAAGCATTAGGACTG 58.894 55.000 0.00 0.00 0.00 3.51
163 164 0.704076 TGGGGCAAAGCATTAGGACT 59.296 50.000 0.00 0.00 0.00 3.85
164 165 0.817654 GTGGGGCAAAGCATTAGGAC 59.182 55.000 0.00 0.00 0.00 3.85
165 166 0.324275 GGTGGGGCAAAGCATTAGGA 60.324 55.000 0.00 0.00 0.00 2.94
166 167 0.324645 AGGTGGGGCAAAGCATTAGG 60.325 55.000 0.00 0.00 0.00 2.69
167 168 1.106285 GAGGTGGGGCAAAGCATTAG 58.894 55.000 0.00 0.00 0.00 1.73
168 169 0.324275 GGAGGTGGGGCAAAGCATTA 60.324 55.000 0.00 0.00 0.00 1.90
169 170 1.610379 GGAGGTGGGGCAAAGCATT 60.610 57.895 0.00 0.00 0.00 3.56
170 171 2.037847 GGAGGTGGGGCAAAGCAT 59.962 61.111 0.00 0.00 0.00 3.79
171 172 2.786512 GATGGAGGTGGGGCAAAGCA 62.787 60.000 0.00 0.00 0.00 3.91
172 173 2.037847 ATGGAGGTGGGGCAAAGC 59.962 61.111 0.00 0.00 0.00 3.51
173 174 0.040204 AAGATGGAGGTGGGGCAAAG 59.960 55.000 0.00 0.00 0.00 2.77
174 175 0.039618 GAAGATGGAGGTGGGGCAAA 59.960 55.000 0.00 0.00 0.00 3.68
175 176 1.691219 GAAGATGGAGGTGGGGCAA 59.309 57.895 0.00 0.00 0.00 4.52
176 177 2.669133 CGAAGATGGAGGTGGGGCA 61.669 63.158 0.00 0.00 0.00 5.36
177 178 2.190578 CGAAGATGGAGGTGGGGC 59.809 66.667 0.00 0.00 0.00 5.80
178 179 2.190578 GCGAAGATGGAGGTGGGG 59.809 66.667 0.00 0.00 0.00 4.96
179 180 2.202932 CGCGAAGATGGAGGTGGG 60.203 66.667 0.00 0.00 0.00 4.61
180 181 2.892425 GCGCGAAGATGGAGGTGG 60.892 66.667 12.10 0.00 0.00 4.61
181 182 2.169789 CAGCGCGAAGATGGAGGTG 61.170 63.158 12.10 0.00 31.47 4.00
182 183 2.172483 AACAGCGCGAAGATGGAGGT 62.172 55.000 12.10 0.00 41.32 3.85
183 184 0.179111 TAACAGCGCGAAGATGGAGG 60.179 55.000 12.10 0.00 41.32 4.30
184 185 1.203928 CTAACAGCGCGAAGATGGAG 58.796 55.000 12.10 0.84 41.32 3.86
185 186 0.530744 ACTAACAGCGCGAAGATGGA 59.469 50.000 12.10 0.00 41.32 3.41
186 187 1.852895 GTACTAACAGCGCGAAGATGG 59.147 52.381 12.10 0.00 41.32 3.51
187 188 2.279136 GTGTACTAACAGCGCGAAGATG 59.721 50.000 12.10 4.73 42.99 2.90
188 189 2.527100 GTGTACTAACAGCGCGAAGAT 58.473 47.619 12.10 0.00 35.91 2.40
189 190 1.401931 GGTGTACTAACAGCGCGAAGA 60.402 52.381 12.10 0.00 43.60 2.87
190 191 0.989890 GGTGTACTAACAGCGCGAAG 59.010 55.000 12.10 2.77 43.60 3.79
191 192 3.111536 GGTGTACTAACAGCGCGAA 57.888 52.632 12.10 0.00 43.60 4.70
192 193 4.874534 GGTGTACTAACAGCGCGA 57.125 55.556 12.10 0.00 43.60 5.87
197 198 2.683867 CGAGGAGAGGGTGTACTAACAG 59.316 54.545 0.00 0.00 35.91 3.16
198 199 2.719739 CGAGGAGAGGGTGTACTAACA 58.280 52.381 0.00 0.00 0.00 2.41
199 200 1.404748 GCGAGGAGAGGGTGTACTAAC 59.595 57.143 0.00 0.00 0.00 2.34
200 201 1.684248 GGCGAGGAGAGGGTGTACTAA 60.684 57.143 0.00 0.00 0.00 2.24
201 202 0.106819 GGCGAGGAGAGGGTGTACTA 60.107 60.000 0.00 0.00 0.00 1.82
202 203 1.380112 GGCGAGGAGAGGGTGTACT 60.380 63.158 0.00 0.00 0.00 2.73
203 204 2.772691 CGGCGAGGAGAGGGTGTAC 61.773 68.421 0.00 0.00 0.00 2.90
204 205 2.439701 CGGCGAGGAGAGGGTGTA 60.440 66.667 0.00 0.00 0.00 2.90
243 244 1.304282 CCCACATGCACCTAAGCCT 59.696 57.895 0.00 0.00 0.00 4.58
255 256 3.372730 AAATGCGCACGCCCACAT 61.373 55.556 14.90 0.00 41.09 3.21
319 320 2.833943 AGAAAAATCATGGTGGGCCTTC 59.166 45.455 4.53 0.00 35.27 3.46
323 324 2.231235 ACGAAGAAAAATCATGGTGGGC 59.769 45.455 0.00 0.00 0.00 5.36
339 340 8.879342 AAACAGAGAAGGATGATATAACGAAG 57.121 34.615 0.00 0.00 0.00 3.79
380 381 4.837218 AGAAGAAGGATGATACCCCTCAT 58.163 43.478 0.00 0.00 38.57 2.90
381 382 4.078336 AGAGAAGAAGGATGATACCCCTCA 60.078 45.833 0.00 0.00 31.17 3.86
382 383 4.488770 AGAGAAGAAGGATGATACCCCTC 58.511 47.826 0.00 0.00 31.17 4.30
389 390 4.277476 ACTCACGAGAGAAGAAGGATGAT 58.723 43.478 17.13 0.00 44.98 2.45
400 401 2.573369 GCCAGGTATACTCACGAGAGA 58.427 52.381 17.13 0.90 44.98 3.10
402 403 1.064240 TGGCCAGGTATACTCACGAGA 60.064 52.381 0.00 0.00 0.00 4.04
403 404 1.399714 TGGCCAGGTATACTCACGAG 58.600 55.000 0.00 0.00 0.00 4.18
404 405 2.082140 ATGGCCAGGTATACTCACGA 57.918 50.000 13.05 0.00 0.00 4.35
405 406 2.029290 GGTATGGCCAGGTATACTCACG 60.029 54.545 13.05 0.00 37.17 4.35
406 407 3.240302 AGGTATGGCCAGGTATACTCAC 58.760 50.000 13.05 0.00 40.61 3.51
407 408 3.507411 GAGGTATGGCCAGGTATACTCA 58.493 50.000 13.05 0.00 40.61 3.41
408 409 2.492484 CGAGGTATGGCCAGGTATACTC 59.508 54.545 13.05 11.55 40.61 2.59
409 410 2.526432 CGAGGTATGGCCAGGTATACT 58.474 52.381 13.05 3.01 40.61 2.12
410 411 1.549170 CCGAGGTATGGCCAGGTATAC 59.451 57.143 13.05 8.77 40.61 1.47
411 412 1.551560 CCCGAGGTATGGCCAGGTATA 60.552 57.143 13.05 0.00 40.61 1.47
412 413 0.836400 CCCGAGGTATGGCCAGGTAT 60.836 60.000 13.05 0.00 40.61 2.73
413 414 1.458777 CCCGAGGTATGGCCAGGTA 60.459 63.158 13.05 0.00 40.61 3.08
414 415 2.768344 CCCGAGGTATGGCCAGGT 60.768 66.667 13.05 0.00 40.61 4.00
415 416 4.256180 GCCCGAGGTATGGCCAGG 62.256 72.222 13.05 6.01 41.97 4.45
438 439 3.950794 TTGCGTCGGGCTTGGCTAG 62.951 63.158 0.00 0.00 44.05 3.42
439 440 3.538785 TTTGCGTCGGGCTTGGCTA 62.539 57.895 0.00 0.00 44.05 3.93
440 441 4.947147 TTTGCGTCGGGCTTGGCT 62.947 61.111 0.00 0.00 44.05 4.75
441 442 3.492311 TTTTTGCGTCGGGCTTGGC 62.492 57.895 0.00 0.00 44.05 4.52
442 443 2.725008 TTTTTGCGTCGGGCTTGG 59.275 55.556 0.00 0.00 44.05 3.61
456 457 4.198087 GCTCAGGCCTGGGTTTTT 57.802 55.556 33.05 0.00 32.48 1.94
510 511 3.880162 TTTACGTGTTCGGGCCGGG 62.880 63.158 27.98 12.73 41.85 5.73
511 512 1.903783 CTTTTACGTGTTCGGGCCGG 61.904 60.000 27.98 12.18 41.85 6.13
512 513 1.494189 CTTTTACGTGTTCGGGCCG 59.506 57.895 22.51 22.51 41.85 6.13
513 514 1.208358 GCTTTTACGTGTTCGGGCC 59.792 57.895 0.00 0.00 41.85 5.80
514 515 1.208358 GGCTTTTACGTGTTCGGGC 59.792 57.895 0.00 0.00 41.85 6.13
515 516 1.871077 GGGCTTTTACGTGTTCGGG 59.129 57.895 0.00 0.00 41.85 5.14
516 517 1.223417 ACGGGCTTTTACGTGTTCGG 61.223 55.000 0.00 0.00 42.39 4.30
517 518 0.162294 GACGGGCTTTTACGTGTTCG 59.838 55.000 0.00 0.00 44.24 3.95
518 519 0.514255 GGACGGGCTTTTACGTGTTC 59.486 55.000 0.00 0.00 44.24 3.18
519 520 1.223417 CGGACGGGCTTTTACGTGTT 61.223 55.000 0.00 0.00 44.24 3.32
520 521 1.665599 CGGACGGGCTTTTACGTGT 60.666 57.895 0.00 0.00 44.24 4.49
521 522 2.385091 CCGGACGGGCTTTTACGTG 61.385 63.158 0.00 0.00 44.24 4.49
552 553 2.741486 TTTTCTGAAGGACGGGCCGG 62.741 60.000 31.78 12.53 43.43 6.13
553 554 0.887387 TTTTTCTGAAGGACGGGCCG 60.887 55.000 27.06 27.06 43.43 6.13
554 555 0.596577 GTTTTTCTGAAGGACGGGCC 59.403 55.000 0.00 0.00 0.00 5.80
555 556 0.237498 CGTTTTTCTGAAGGACGGGC 59.763 55.000 15.42 0.00 0.00 6.13
556 557 0.237498 GCGTTTTTCTGAAGGACGGG 59.763 55.000 21.01 4.01 34.55 5.28
557 558 0.110823 CGCGTTTTTCTGAAGGACGG 60.111 55.000 21.01 12.17 34.55 4.79
558 559 0.856641 TCGCGTTTTTCTGAAGGACG 59.143 50.000 17.62 17.62 36.85 4.79
559 560 3.328237 TTTCGCGTTTTTCTGAAGGAC 57.672 42.857 5.77 0.00 0.00 3.85
560 561 3.687200 GTTTTCGCGTTTTTCTGAAGGA 58.313 40.909 5.77 0.00 0.00 3.36
561 562 2.462565 CGTTTTCGCGTTTTTCTGAAGG 59.537 45.455 5.77 0.00 36.22 3.46
562 563 3.347443 TCGTTTTCGCGTTTTTCTGAAG 58.653 40.909 5.77 0.00 43.73 3.02
563 564 3.386613 TCGTTTTCGCGTTTTTCTGAA 57.613 38.095 5.77 0.00 43.73 3.02
564 565 3.284914 CATCGTTTTCGCGTTTTTCTGA 58.715 40.909 5.77 0.00 43.73 3.27
565 566 2.400408 CCATCGTTTTCGCGTTTTTCTG 59.600 45.455 5.77 0.00 43.73 3.02
566 567 2.603652 CCCATCGTTTTCGCGTTTTTCT 60.604 45.455 5.77 0.00 43.73 2.52
567 568 1.711824 CCCATCGTTTTCGCGTTTTTC 59.288 47.619 5.77 0.00 43.73 2.29
568 569 1.761206 CCCATCGTTTTCGCGTTTTT 58.239 45.000 5.77 0.00 43.73 1.94
569 570 0.662077 GCCCATCGTTTTCGCGTTTT 60.662 50.000 5.77 0.00 43.73 2.43
570 571 1.081708 GCCCATCGTTTTCGCGTTT 60.082 52.632 5.77 0.00 43.73 3.60
571 572 2.559330 GCCCATCGTTTTCGCGTT 59.441 55.556 5.77 0.00 43.73 4.84
572 573 3.428282 GGCCCATCGTTTTCGCGT 61.428 61.111 5.77 0.00 43.73 6.01
573 574 4.174129 GGGCCCATCGTTTTCGCG 62.174 66.667 19.95 0.00 43.73 5.87
574 575 4.174129 CGGGCCCATCGTTTTCGC 62.174 66.667 24.92 0.00 43.73 4.70
575 576 3.505184 CCGGGCCCATCGTTTTCG 61.505 66.667 24.92 3.62 45.64 3.46
576 577 3.138128 CCCGGGCCCATCGTTTTC 61.138 66.667 24.92 0.00 0.00 2.29
606 607 0.727398 GATTTTGAGCCCGAAGACCG 59.273 55.000 0.00 0.00 38.18 4.79
607 608 2.115343 AGATTTTGAGCCCGAAGACC 57.885 50.000 0.00 0.00 0.00 3.85
608 609 3.198872 CCTAGATTTTGAGCCCGAAGAC 58.801 50.000 0.00 0.00 0.00 3.01
609 610 2.420129 GCCTAGATTTTGAGCCCGAAGA 60.420 50.000 0.00 0.00 0.00 2.87
610 611 1.943340 GCCTAGATTTTGAGCCCGAAG 59.057 52.381 0.00 0.00 0.00 3.79
611 612 1.408266 GGCCTAGATTTTGAGCCCGAA 60.408 52.381 0.00 0.00 37.66 4.30
612 613 0.180406 GGCCTAGATTTTGAGCCCGA 59.820 55.000 0.00 0.00 37.66 5.14
613 614 2.707902 GGCCTAGATTTTGAGCCCG 58.292 57.895 0.00 0.00 37.66 6.13
615 616 0.180406 TCGGGCCTAGATTTTGAGCC 59.820 55.000 0.84 0.00 43.09 4.70
616 617 1.587547 CTCGGGCCTAGATTTTGAGC 58.412 55.000 0.84 0.00 0.00 4.26
617 618 1.587547 GCTCGGGCCTAGATTTTGAG 58.412 55.000 9.63 2.79 0.00 3.02
618 619 3.780624 GCTCGGGCCTAGATTTTGA 57.219 52.632 9.63 0.00 0.00 2.69
664 665 2.332654 CCGAAAAAGCCTGACCCGG 61.333 63.158 0.00 0.00 0.00 5.73
665 666 2.332654 CCCGAAAAAGCCTGACCCG 61.333 63.158 0.00 0.00 0.00 5.28
666 667 2.636412 GCCCGAAAAAGCCTGACCC 61.636 63.158 0.00 0.00 0.00 4.46
667 668 2.636412 GGCCCGAAAAAGCCTGACC 61.636 63.158 0.00 0.00 46.14 4.02
668 669 2.962569 GGCCCGAAAAAGCCTGAC 59.037 61.111 0.00 0.00 46.14 3.51
706 707 1.528824 CAGTAGTCCTGGCCATGGG 59.471 63.158 15.13 4.96 37.54 4.00
714 715 1.821753 CCTGTCTCACCAGTAGTCCTG 59.178 57.143 0.00 0.00 41.15 3.86
715 716 1.893210 GCCTGTCTCACCAGTAGTCCT 60.893 57.143 0.00 0.00 0.00 3.85
716 717 0.533032 GCCTGTCTCACCAGTAGTCC 59.467 60.000 0.00 0.00 0.00 3.85
717 718 1.474879 GAGCCTGTCTCACCAGTAGTC 59.525 57.143 0.00 0.00 41.51 2.59
718 719 1.551452 GAGCCTGTCTCACCAGTAGT 58.449 55.000 0.00 0.00 41.51 2.73
719 720 0.453793 CGAGCCTGTCTCACCAGTAG 59.546 60.000 0.00 0.00 41.98 2.57
720 721 0.965866 CCGAGCCTGTCTCACCAGTA 60.966 60.000 0.00 0.00 41.98 2.74
721 722 2.279069 CCGAGCCTGTCTCACCAGT 61.279 63.158 0.00 0.00 41.98 4.00
804 814 2.338500 CACGAAAGCCTACAAGGAGAC 58.662 52.381 0.00 0.00 37.67 3.36
968 986 0.247497 CGAACTGTCGCTCTCTCTCG 60.247 60.000 0.00 0.00 41.08 4.04
1070 1132 2.910199 CCTGGATCTTGCTTTCGATCA 58.090 47.619 0.00 0.00 38.18 2.92
1247 1555 7.508687 TGTTAATTAGCAGCAGATTCCTGATA 58.491 34.615 0.00 0.00 43.02 2.15
1265 1573 4.024472 GGTGCGTTTTGGCATTTGTTAATT 60.024 37.500 0.00 0.00 45.99 1.40
1297 1608 1.200716 CCTGTTGCTAACCTGCACATG 59.799 52.381 0.00 0.00 43.20 3.21
1410 1723 2.431057 ACTGACTGATCGATTACCCCAC 59.569 50.000 0.00 0.00 0.00 4.61
1434 1747 8.567948 CGCTATGGACCAGAATTTATATTTGTT 58.432 33.333 0.00 0.00 0.00 2.83
1435 1748 7.174946 CCGCTATGGACCAGAATTTATATTTGT 59.825 37.037 0.00 0.00 42.00 2.83
1460 1775 0.394565 ACAACTGAGCTGTGAGGTCC 59.605 55.000 0.00 0.00 41.77 4.46
1492 1807 3.181526 GGATGCGCATGATCGATTAGAAC 60.182 47.826 30.76 8.03 0.00 3.01
1497 1812 1.904852 GCGGATGCGCATGATCGATT 61.905 55.000 30.76 0.04 34.62 3.34
1513 1828 2.102420 TCCTCACCTACATAACATGCGG 59.898 50.000 0.00 0.00 0.00 5.69
1589 1912 3.069586 GAACATCCATGTCGATGGTCCTA 59.930 47.826 15.43 0.00 46.83 2.94
1633 1961 5.303589 GGCCTGGTGTATGTACTGTATTCTA 59.696 44.000 0.00 0.00 0.00 2.10
1635 1963 4.377897 GGCCTGGTGTATGTACTGTATTC 58.622 47.826 0.00 0.00 0.00 1.75
1637 1965 2.704065 GGGCCTGGTGTATGTACTGTAT 59.296 50.000 0.84 0.00 0.00 2.29
1638 1966 2.112998 GGGCCTGGTGTATGTACTGTA 58.887 52.381 0.84 0.00 0.00 2.74
1639 1967 0.909623 GGGCCTGGTGTATGTACTGT 59.090 55.000 0.84 0.00 0.00 3.55
1640 1968 0.908910 TGGGCCTGGTGTATGTACTG 59.091 55.000 4.53 0.00 0.00 2.74
1641 1969 1.663911 TTGGGCCTGGTGTATGTACT 58.336 50.000 4.53 0.00 0.00 2.73
1642 1970 2.500392 TTTGGGCCTGGTGTATGTAC 57.500 50.000 4.53 0.00 0.00 2.90
1643 1971 2.948147 GCATTTGGGCCTGGTGTATGTA 60.948 50.000 4.53 0.00 0.00 2.29
1644 1972 1.851304 CATTTGGGCCTGGTGTATGT 58.149 50.000 4.53 0.00 0.00 2.29
1645 1973 0.461135 GCATTTGGGCCTGGTGTATG 59.539 55.000 4.53 0.00 0.00 2.39
1649 1977 1.219664 CATGCATTTGGGCCTGGTG 59.780 57.895 4.53 1.37 0.00 4.17
1693 2024 4.192317 GACCCATGAAGATAAGACACACC 58.808 47.826 0.00 0.00 0.00 4.16
1952 2293 9.188588 CACTGTACGTACTATATATTTGGTTGG 57.811 37.037 25.12 0.52 0.00 3.77
1976 2658 2.658285 CACACAGAGCTGAAAATGCAC 58.342 47.619 4.21 0.00 0.00 4.57
1997 2679 6.504398 TGTACTATCTTCCTAAGCATGTTCG 58.496 40.000 0.00 0.00 0.00 3.95
2113 2798 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
2114 2799 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
2115 2800 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
2116 2801 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
2117 2802 2.026636 TCACTTATTTTGGGACGGAGGG 60.027 50.000 0.00 0.00 0.00 4.30
2118 2803 3.007635 GTCACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
2119 2804 3.933332 GAGTCACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 33.84 4.63
2120 2805 3.325425 TGAGTCACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 33.84 4.69
2121 2806 3.670625 TGAGTCACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 33.84 4.79
2122 2807 5.880054 ATTGAGTCACTTATTTTGGGACG 57.120 39.130 0.00 0.00 33.84 4.79
2177 2862 9.238368 CCCCAAAATAAGTGACTCAACTTTATA 57.762 33.333 0.00 0.00 40.77 0.98
2178 2863 7.947890 TCCCCAAAATAAGTGACTCAACTTTAT 59.052 33.333 0.00 0.00 40.77 1.40
2179 2864 7.229907 GTCCCCAAAATAAGTGACTCAACTTTA 59.770 37.037 0.00 0.00 40.77 1.85
2180 2865 6.040504 GTCCCCAAAATAAGTGACTCAACTTT 59.959 38.462 0.00 0.00 40.77 2.66
2181 2866 5.535030 GTCCCCAAAATAAGTGACTCAACTT 59.465 40.000 0.00 0.00 42.89 2.66
2182 2867 5.070685 GTCCCCAAAATAAGTGACTCAACT 58.929 41.667 0.00 0.00 0.00 3.16
2183 2868 4.083484 CGTCCCCAAAATAAGTGACTCAAC 60.083 45.833 0.00 0.00 0.00 3.18
2184 2869 4.069304 CGTCCCCAAAATAAGTGACTCAA 58.931 43.478 0.00 0.00 0.00 3.02
2185 2870 3.558321 CCGTCCCCAAAATAAGTGACTCA 60.558 47.826 0.00 0.00 0.00 3.41
2186 2871 3.007635 CCGTCCCCAAAATAAGTGACTC 58.992 50.000 0.00 0.00 0.00 3.36
2187 2872 2.640826 TCCGTCCCCAAAATAAGTGACT 59.359 45.455 0.00 0.00 0.00 3.41
2188 2873 3.007635 CTCCGTCCCCAAAATAAGTGAC 58.992 50.000 0.00 0.00 0.00 3.67
2189 2874 2.026636 CCTCCGTCCCCAAAATAAGTGA 60.027 50.000 0.00 0.00 0.00 3.41
2190 2875 2.365582 CCTCCGTCCCCAAAATAAGTG 58.634 52.381 0.00 0.00 0.00 3.16
2191 2876 1.283905 CCCTCCGTCCCCAAAATAAGT 59.716 52.381 0.00 0.00 0.00 2.24
2192 2877 1.562475 TCCCTCCGTCCCCAAAATAAG 59.438 52.381 0.00 0.00 0.00 1.73
2193 2878 1.562475 CTCCCTCCGTCCCCAAAATAA 59.438 52.381 0.00 0.00 0.00 1.40
2194 2879 1.209621 CTCCCTCCGTCCCCAAAATA 58.790 55.000 0.00 0.00 0.00 1.40
2195 2880 0.845102 ACTCCCTCCGTCCCCAAAAT 60.845 55.000 0.00 0.00 0.00 1.82
2196 2881 0.178897 TACTCCCTCCGTCCCCAAAA 60.179 55.000 0.00 0.00 0.00 2.44
2197 2882 0.616679 CTACTCCCTCCGTCCCCAAA 60.617 60.000 0.00 0.00 0.00 3.28
2198 2883 1.001248 CTACTCCCTCCGTCCCCAA 59.999 63.158 0.00 0.00 0.00 4.12
2199 2884 0.920763 TACTACTCCCTCCGTCCCCA 60.921 60.000 0.00 0.00 0.00 4.96
2200 2885 0.178995 CTACTACTCCCTCCGTCCCC 60.179 65.000 0.00 0.00 0.00 4.81
2201 2886 0.550432 ACTACTACTCCCTCCGTCCC 59.450 60.000 0.00 0.00 0.00 4.46
2202 2887 2.433662 AACTACTACTCCCTCCGTCC 57.566 55.000 0.00 0.00 0.00 4.79
2203 2888 4.071423 GGATAACTACTACTCCCTCCGTC 58.929 52.174 0.00 0.00 0.00 4.79
2204 2889 3.461085 TGGATAACTACTACTCCCTCCGT 59.539 47.826 0.00 0.00 0.00 4.69
2205 2890 4.096190 TGGATAACTACTACTCCCTCCG 57.904 50.000 0.00 0.00 0.00 4.63
2206 2891 5.302313 CAGTTGGATAACTACTACTCCCTCC 59.698 48.000 0.00 0.00 45.12 4.30
2207 2892 5.302313 CCAGTTGGATAACTACTACTCCCTC 59.698 48.000 0.00 0.00 45.12 4.30
2208 2893 5.043582 TCCAGTTGGATAACTACTACTCCCT 60.044 44.000 0.00 0.00 45.12 4.20
2209 2894 5.206587 TCCAGTTGGATAACTACTACTCCC 58.793 45.833 0.00 0.00 45.12 4.30
2210 2895 6.683360 GCTTCCAGTTGGATAACTACTACTCC 60.683 46.154 0.93 0.00 45.12 3.85
2211 2896 6.274579 GCTTCCAGTTGGATAACTACTACTC 58.725 44.000 0.93 0.00 45.12 2.59
2212 2897 5.128991 GGCTTCCAGTTGGATAACTACTACT 59.871 44.000 0.93 0.00 45.12 2.57
2213 2898 5.105064 TGGCTTCCAGTTGGATAACTACTAC 60.105 44.000 0.93 0.00 45.12 2.73
2214 2899 5.027460 TGGCTTCCAGTTGGATAACTACTA 58.973 41.667 0.93 0.00 45.12 1.82
2295 3022 7.416731 ACTAGTATACTAAACAACCTCCCTGA 58.583 38.462 13.51 0.00 0.00 3.86
2297 3024 9.774071 TTAACTAGTATACTAAACAACCTCCCT 57.226 33.333 13.51 0.00 0.00 4.20
2313 3040 9.798994 CCGAGACACTTTAATGTTAACTAGTAT 57.201 33.333 7.22 0.00 31.24 2.12
2314 3041 9.013229 TCCGAGACACTTTAATGTTAACTAGTA 57.987 33.333 7.22 0.00 31.24 1.82
2315 3042 7.889469 TCCGAGACACTTTAATGTTAACTAGT 58.111 34.615 7.22 0.00 31.24 2.57
2316 3043 8.928270 ATCCGAGACACTTTAATGTTAACTAG 57.072 34.615 7.22 0.00 31.24 2.57
2317 3044 9.362539 GAATCCGAGACACTTTAATGTTAACTA 57.637 33.333 7.22 0.00 31.24 2.24
2318 3045 7.876068 TGAATCCGAGACACTTTAATGTTAACT 59.124 33.333 7.22 0.00 31.24 2.24
2388 3115 1.081840 GCAAGCAAGTCCTTGTCGC 60.082 57.895 8.69 5.56 43.17 5.19
2389 3116 1.205064 CGCAAGCAAGTCCTTGTCG 59.795 57.895 8.69 4.46 43.17 4.35
2495 3222 4.777366 TCATGATGGACAGGTCAAGTCTTA 59.223 41.667 1.41 0.00 36.29 2.10
2511 3238 6.688637 TCAAGCAAAGTATCCTTCATGATG 57.311 37.500 0.00 0.00 0.00 3.07
2512 3239 6.204301 CGATCAAGCAAAGTATCCTTCATGAT 59.796 38.462 0.00 0.00 0.00 2.45
2513 3240 5.525012 CGATCAAGCAAAGTATCCTTCATGA 59.475 40.000 0.00 0.00 0.00 3.07
2516 3243 3.623060 GCGATCAAGCAAAGTATCCTTCA 59.377 43.478 0.00 0.00 37.05 3.02
2517 3244 3.002759 GGCGATCAAGCAAAGTATCCTTC 59.997 47.826 0.00 0.00 39.27 3.46
2518 3245 2.945668 GGCGATCAAGCAAAGTATCCTT 59.054 45.455 0.00 0.00 39.27 3.36
2519 3246 2.092968 TGGCGATCAAGCAAAGTATCCT 60.093 45.455 0.00 0.00 39.27 3.24
2520 3247 2.032178 GTGGCGATCAAGCAAAGTATCC 59.968 50.000 0.00 0.00 39.27 2.59
2521 3248 2.939103 AGTGGCGATCAAGCAAAGTATC 59.061 45.455 0.00 0.00 39.27 2.24
2522 3249 2.991250 AGTGGCGATCAAGCAAAGTAT 58.009 42.857 0.00 0.00 39.27 2.12
2523 3250 2.472695 AGTGGCGATCAAGCAAAGTA 57.527 45.000 0.00 0.00 39.27 2.24
2524 3251 1.537202 GAAGTGGCGATCAAGCAAAGT 59.463 47.619 0.00 0.00 39.27 2.66
2525 3252 1.536766 TGAAGTGGCGATCAAGCAAAG 59.463 47.619 0.00 0.00 39.27 2.77
2526 3253 1.603456 TGAAGTGGCGATCAAGCAAA 58.397 45.000 0.00 0.00 39.27 3.68
2527 3254 1.825090 ATGAAGTGGCGATCAAGCAA 58.175 45.000 0.00 0.00 39.27 3.91
2528 3255 2.689553 TATGAAGTGGCGATCAAGCA 57.310 45.000 0.00 0.00 39.27 3.91
2529 3256 3.313526 ACATTATGAAGTGGCGATCAAGC 59.686 43.478 0.00 0.00 0.00 4.01
2530 3257 4.787563 GCACATTATGAAGTGGCGATCAAG 60.788 45.833 0.00 0.00 36.29 3.02
2531 3258 3.065233 GCACATTATGAAGTGGCGATCAA 59.935 43.478 0.00 0.00 36.29 2.57
2532 3259 2.613595 GCACATTATGAAGTGGCGATCA 59.386 45.455 0.00 0.00 36.29 2.92
2550 3277 0.876342 GGAGGCTGCGTACTATGCAC 60.876 60.000 0.00 0.00 34.76 4.57
2572 3299 0.588233 CTACGTAGTACACTGCCGCG 60.588 60.000 14.66 0.00 45.11 6.46
2575 3302 0.449388 ACGCTACGTAGTACACTGCC 59.551 55.000 22.98 3.72 45.11 4.85
2576 3303 1.807738 GACGCTACGTAGTACACTGC 58.192 55.000 22.98 7.49 45.11 4.40
2577 3304 1.655597 TCGACGCTACGTAGTACACTG 59.344 52.381 22.98 9.34 45.11 3.66
2580 3307 1.059122 CGTTCGACGCTACGTAGTACA 59.941 52.381 22.98 1.59 41.37 2.90
2611 3344 7.373617 TGATTGATTGATACAGGTAGGCTAA 57.626 36.000 0.00 0.00 0.00 3.09
2633 3366 9.554724 GCATACGAATGAAGTTCTTATTTTTGA 57.445 29.630 4.17 0.00 34.84 2.69
2634 3367 8.798153 GGCATACGAATGAAGTTCTTATTTTTG 58.202 33.333 4.17 0.00 34.84 2.44
2649 3385 2.283298 AGAACTGCAGGCATACGAATG 58.717 47.619 19.93 0.00 36.09 2.67
2653 3389 2.293677 TGTAGAACTGCAGGCATACG 57.706 50.000 19.93 0.00 0.00 3.06
2797 3533 2.751806 CCCATTCTTCTTCCTTGTCAGC 59.248 50.000 0.00 0.00 0.00 4.26
2829 3565 5.642063 GCTACTAGTGGCACAAAGTGAAATA 59.358 40.000 24.73 11.93 44.16 1.40
2861 3598 0.320247 GCCCGTGCCTGATCTATGAG 60.320 60.000 0.00 0.00 0.00 2.90
2864 3601 2.737180 CGCCCGTGCCTGATCTAT 59.263 61.111 0.00 0.00 0.00 1.98
2899 3641 7.361713 GGCATACTAGTACAAATCAAGCACAAA 60.362 37.037 4.31 0.00 0.00 2.83
2939 3803 5.874810 TGCAAATTAAGGAGTGCTAGTAGTG 59.125 40.000 0.00 0.00 37.87 2.74
2940 3804 6.049955 TGCAAATTAAGGAGTGCTAGTAGT 57.950 37.500 0.00 0.00 37.87 2.73
2941 3805 6.036517 CACTGCAAATTAAGGAGTGCTAGTAG 59.963 42.308 15.89 0.00 45.93 2.57
2942 3806 5.874810 CACTGCAAATTAAGGAGTGCTAGTA 59.125 40.000 15.89 0.00 45.93 1.82
2943 3807 4.697352 CACTGCAAATTAAGGAGTGCTAGT 59.303 41.667 15.89 7.70 45.93 2.57
2944 3808 5.227238 CACTGCAAATTAAGGAGTGCTAG 57.773 43.478 15.89 7.22 45.93 3.42
3073 3946 2.913777 TAGTGTGCGTAGTACTGCAG 57.086 50.000 13.48 13.48 45.46 4.41
3076 3949 5.147767 TCGTATTAGTGTGCGTAGTACTG 57.852 43.478 5.39 0.00 45.46 2.74
3311 4188 8.926715 ACAAGTCAACAAAGATTTCTTTTACC 57.073 30.769 2.83 0.00 43.07 2.85
3314 4191 9.366216 GGTTACAAGTCAACAAAGATTTCTTTT 57.634 29.630 2.83 0.00 43.07 2.27
3318 4200 7.595130 GGATGGTTACAAGTCAACAAAGATTTC 59.405 37.037 0.00 0.00 0.00 2.17
3377 4259 6.086765 GCACGTTCTTACATTTTCATGTGAAG 59.913 38.462 0.00 0.02 43.92 3.02
3606 4488 2.041115 GCGAGGAGTGGCTTTTCCC 61.041 63.158 0.00 0.00 33.83 3.97
3678 4560 1.527034 GCCATGTGAGTTGCTGAAGA 58.473 50.000 0.00 0.00 0.00 2.87
3792 4676 2.095668 GCTACAGATCGACCCATAGACG 60.096 54.545 0.00 0.00 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.