Multiple sequence alignment - TraesCS4D01G128000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G128000 chr4D 100.000 6716 0 0 1 6716 112191162 112197877 0.000000e+00 12403.0
1 TraesCS4D01G128000 chr4D 96.774 93 3 0 2959 3051 41339602 41339510 9.020000e-34 156.0
2 TraesCS4D01G128000 chr4D 95.789 95 4 0 3398 3492 112194494 112194588 3.240000e-33 154.0
3 TraesCS4D01G128000 chr4D 95.789 95 4 0 3333 3427 112194559 112194653 3.240000e-33 154.0
4 TraesCS4D01G128000 chr4D 93.151 73 5 0 2320 2392 242937226 242937298 2.560000e-19 108.0
5 TraesCS4D01G128000 chr4D 100.000 30 0 0 3463 3492 112194494 112194523 1.000000e-03 56.5
6 TraesCS4D01G128000 chr4D 100.000 30 0 0 3333 3362 112194624 112194653 1.000000e-03 56.5
7 TraesCS4D01G128000 chr4A 93.977 3171 125 20 3397 6518 464991985 464988832 0.000000e+00 4737.0
8 TraesCS4D01G128000 chr4A 94.802 1789 41 14 661 2432 464994831 464993078 0.000000e+00 2741.0
9 TraesCS4D01G128000 chr4A 92.719 467 25 5 1 462 464998878 464998416 0.000000e+00 665.0
10 TraesCS4D01G128000 chr4A 90.537 391 27 6 2496 2878 464993039 464992651 6.010000e-140 508.0
11 TraesCS4D01G128000 chr4A 91.600 250 18 2 3052 3298 464992302 464992053 6.450000e-90 342.0
12 TraesCS4D01G128000 chr4A 90.850 153 14 0 3275 3427 464992042 464991890 8.830000e-49 206.0
13 TraesCS4D01G128000 chr4A 97.059 34 1 0 3462 3495 464991985 464991952 2.620000e-04 58.4
14 TraesCS4D01G128000 chr4B 94.732 2392 84 13 3397 5749 172774378 172776766 0.000000e+00 3681.0
15 TraesCS4D01G128000 chr4B 94.505 1729 55 18 730 2434 172771715 172773427 0.000000e+00 2630.0
16 TraesCS4D01G128000 chr4B 94.326 423 19 4 2460 2878 172773407 172773828 1.580000e-180 643.0
17 TraesCS4D01G128000 chr4B 95.405 370 11 4 5736 6101 172782828 172783195 9.710000e-163 584.0
18 TraesCS4D01G128000 chr4B 89.791 382 32 5 3049 3427 172774096 172774473 3.640000e-132 483.0
19 TraesCS4D01G128000 chr4B 95.392 217 10 0 6302 6518 172789803 172790019 4.990000e-91 346.0
20 TraesCS4D01G128000 chr4B 80.170 353 41 16 1 341 172770846 172771181 3.130000e-58 237.0
21 TraesCS4D01G128000 chr4B 100.000 65 0 0 6191 6255 172789742 172789806 3.290000e-23 121.0
22 TraesCS4D01G128000 chr4B 98.462 65 1 0 6097 6161 172789676 172789740 1.530000e-21 115.0
23 TraesCS4D01G128000 chr4B 94.521 73 4 0 2320 2392 300801353 300801425 5.500000e-21 113.0
24 TraesCS4D01G128000 chr4B 96.226 53 2 0 2876 2928 172773848 172773900 3.340000e-13 87.9
25 TraesCS4D01G128000 chr5D 85.406 788 102 9 1319 2104 224328504 224327728 0.000000e+00 806.0
26 TraesCS4D01G128000 chr5D 88.506 174 20 0 2521 2694 224327380 224327207 1.900000e-50 211.0
27 TraesCS4D01G128000 chr5D 87.006 177 23 0 3742 3918 224327119 224326943 4.110000e-47 200.0
28 TraesCS4D01G128000 chr5D 84.422 199 31 0 4247 4445 224326668 224326470 5.310000e-46 196.0
29 TraesCS4D01G128000 chr5D 94.949 99 4 1 2956 3053 347656209 347656111 3.240000e-33 154.0
30 TraesCS4D01G128000 chr5D 85.156 128 19 0 4031 4158 224326865 224326738 1.520000e-26 132.0
31 TraesCS4D01G128000 chr5B 85.583 763 101 4 1321 2083 247057619 247058372 0.000000e+00 791.0
32 TraesCS4D01G128000 chr5B 88.670 203 18 1 6514 6716 207580529 207580726 6.730000e-60 243.0
33 TraesCS4D01G128000 chr5B 77.327 419 72 14 4031 4445 247059235 247059634 6.780000e-55 226.0
34 TraesCS4D01G128000 chr5B 86.782 174 23 0 2521 2694 247058740 247058913 1.910000e-45 195.0
35 TraesCS4D01G128000 chr5B 86.782 174 23 0 3742 3915 247058984 247059157 1.910000e-45 195.0
36 TraesCS4D01G128000 chr5A 85.583 763 101 5 1321 2083 299068950 299068197 0.000000e+00 791.0
37 TraesCS4D01G128000 chr5A 87.861 173 21 0 2522 2694 299067827 299067655 3.180000e-48 204.0
38 TraesCS4D01G128000 chr5A 84.925 199 30 0 4247 4445 299067088 299066890 1.140000e-47 202.0
39 TraesCS4D01G128000 chr5A 85.876 177 25 0 3742 3918 299067571 299067395 8.890000e-44 189.0
40 TraesCS4D01G128000 chr5A 79.679 187 30 8 462 644 451395514 451395696 1.970000e-25 128.0
41 TraesCS4D01G128000 chr5A 84.375 128 20 0 4031 4158 299067286 299067159 7.070000e-25 126.0
42 TraesCS4D01G128000 chr5A 79.570 186 30 8 463 644 606016028 606016209 7.070000e-25 126.0
43 TraesCS4D01G128000 chr5A 81.301 123 22 1 6521 6642 598261524 598261646 1.540000e-16 99.0
44 TraesCS4D01G128000 chr1D 83.082 331 42 9 5796 6122 413293761 413294081 8.520000e-74 289.0
45 TraesCS4D01G128000 chr1D 95.833 96 3 1 2956 3050 135048028 135048123 3.240000e-33 154.0
46 TraesCS4D01G128000 chr1D 94.000 100 4 2 2953 3050 483185679 483185778 4.200000e-32 150.0
47 TraesCS4D01G128000 chr6D 93.684 190 12 0 6522 6711 14898043 14898232 1.100000e-72 285.0
48 TraesCS4D01G128000 chr2A 75.775 516 113 12 1337 1846 78560736 78561245 4.020000e-62 250.0
49 TraesCS4D01G128000 chr2A 79.570 186 30 8 463 644 665982992 665983173 7.070000e-25 126.0
50 TraesCS4D01G128000 chr2B 75.526 523 114 14 1337 1852 119633719 119633204 1.870000e-60 244.0
51 TraesCS4D01G128000 chr2D 75.335 523 115 14 1337 1852 77383214 77382699 8.700000e-59 239.0
52 TraesCS4D01G128000 chr2D 94.898 98 5 0 2959 3056 30457932 30458029 3.240000e-33 154.0
53 TraesCS4D01G128000 chr2D 94.949 99 4 1 2956 3053 513253216 513253118 3.240000e-33 154.0
54 TraesCS4D01G128000 chr6A 88.384 198 20 3 6514 6711 536981017 536981211 1.130000e-57 235.0
55 TraesCS4D01G128000 chr6A 94.737 38 1 1 1273 1309 578693793 578693756 2.620000e-04 58.4
56 TraesCS4D01G128000 chr3B 95.918 98 4 0 2959 3056 817059742 817059839 6.970000e-35 159.0
57 TraesCS4D01G128000 chr3B 81.667 180 28 5 463 639 41040550 41040727 1.950000e-30 145.0
58 TraesCS4D01G128000 chr3B 78.836 189 31 9 5853 6038 753173937 753174119 1.180000e-22 119.0
59 TraesCS4D01G128000 chrUn 94.949 99 4 1 2956 3053 67634466 67634368 3.240000e-33 154.0
60 TraesCS4D01G128000 chr7D 92.523 107 5 3 2947 3050 586471563 586471669 4.200000e-32 150.0
61 TraesCS4D01G128000 chr3A 80.645 186 32 4 458 641 631129204 631129387 2.530000e-29 141.0
62 TraesCS4D01G128000 chr3A 78.261 207 33 11 5838 6038 699521709 699521509 9.150000e-24 122.0
63 TraesCS4D01G128000 chr1A 79.891 184 32 5 464 644 527973919 527973738 5.470000e-26 130.0
64 TraesCS4D01G128000 chr3D 78.836 189 31 9 5853 6038 565038037 565037855 1.180000e-22 119.0
65 TraesCS4D01G128000 chr3D 94.737 38 2 0 3069 3106 100467688 100467725 7.270000e-05 60.2
66 TraesCS4D01G128000 chr1B 81.081 111 20 1 536 645 539150159 539150049 3.340000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G128000 chr4D 112191162 112197877 6715 False 2564.800000 12403 98.315600 1 6716 5 chr4D.!!$F2 6715
1 TraesCS4D01G128000 chr4A 464988832 464998878 10046 True 1322.485714 4737 93.077714 1 6518 7 chr4A.!!$R1 6517
2 TraesCS4D01G128000 chr4B 172770846 172776766 5920 False 1293.650000 3681 91.625000 1 5749 6 chr4B.!!$F3 5748
3 TraesCS4D01G128000 chr5D 224326470 224328504 2034 True 309.000000 806 86.099200 1319 4445 5 chr5D.!!$R2 3126
4 TraesCS4D01G128000 chr5B 247057619 247059634 2015 False 351.750000 791 84.118500 1321 4445 4 chr5B.!!$F2 3124
5 TraesCS4D01G128000 chr5A 299066890 299068950 2060 True 302.400000 791 85.724000 1321 4445 5 chr5A.!!$R1 3124
6 TraesCS4D01G128000 chr2A 78560736 78561245 509 False 250.000000 250 75.775000 1337 1846 1 chr2A.!!$F1 509
7 TraesCS4D01G128000 chr2B 119633204 119633719 515 True 244.000000 244 75.526000 1337 1852 1 chr2B.!!$R1 515
8 TraesCS4D01G128000 chr2D 77382699 77383214 515 True 239.000000 239 75.335000 1337 1852 1 chr2D.!!$R1 515

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
929 4546 0.317160 ATGACCTCGTTCTCGTTGCA 59.683 50.000 0.00 0.00 38.33 4.08 F
1293 4914 0.033894 ACGAGGAGGAGGAGGAAGAC 60.034 60.000 0.00 0.00 0.00 3.01 F
2814 6590 0.243636 CTTTGAATTCGGGTGCCACC 59.756 55.000 4.93 4.93 37.60 4.61 F
3445 7688 0.623723 TTTGGTCCTACTGATGGCCC 59.376 55.000 0.00 0.00 0.00 5.80 F
4911 9187 1.064017 TCCCCATTCCAATGTACCTGC 60.064 52.381 0.00 0.00 34.60 4.85 F
5197 9486 0.904865 TGCAGTCGAGGGTGGAGAAT 60.905 55.000 0.00 0.00 0.00 2.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2794 6565 0.243636 GTGGCACCCGAATTCAAAGG 59.756 55.0 6.29 5.49 0.00 3.11 R
3028 7234 2.715763 AGTACTCCCTCTGTCCCAAA 57.284 50.0 0.00 0.00 0.00 3.28 R
4461 8717 0.314618 AAGCATGTGCACGCAATTCA 59.685 45.0 17.36 0.00 45.16 2.57 R
5052 9333 0.517316 GCACCGCTTAGTTGTTCAGG 59.483 55.0 0.00 0.00 0.00 3.86 R
5714 10008 0.036164 TCAACATGGACTGGTTCGGG 59.964 55.0 0.00 0.00 0.00 5.14 R
6692 10994 0.101579 TCACGTGTCGCTCTGAAACA 59.898 50.0 16.51 0.00 34.14 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
194 199 3.128764 TCATAGGACACGTGTTGCTCTAG 59.871 47.826 24.26 10.02 0.00 2.43
225 230 5.347093 CAGAATCCATACAGCATACACGATC 59.653 44.000 0.00 0.00 0.00 3.69
227 232 4.243007 TCCATACAGCATACACGATCAG 57.757 45.455 0.00 0.00 0.00 2.90
233 239 3.310774 ACAGCATACACGATCAGAAATGC 59.689 43.478 10.52 10.52 39.93 3.56
256 262 5.408604 GCGTGGTTTTCATCTTCTTCTTCTA 59.591 40.000 0.00 0.00 0.00 2.10
259 265 7.798982 CGTGGTTTTCATCTTCTTCTTCTAAAC 59.201 37.037 0.00 0.00 0.00 2.01
369 442 3.401182 GCCTCTCATCAAGTCATCATCC 58.599 50.000 0.00 0.00 0.00 3.51
401 562 5.033589 ACAATTTGTTGCTTCCAAATCCA 57.966 34.783 0.00 0.00 40.62 3.41
455 616 0.608035 TTTTTCTGCGCCAGGGGTAG 60.608 55.000 14.79 14.79 31.51 3.18
464 3324 2.101582 GCGCCAGGGGTAGATATATGAG 59.898 54.545 5.22 0.00 0.00 2.90
471 3331 7.418483 GCCAGGGGTAGATATATGAGAGAATTC 60.418 44.444 0.00 0.00 0.00 2.17
485 3345 8.753497 ATGAGAGAATTCCTTATTTAACCACC 57.247 34.615 0.65 0.00 0.00 4.61
486 3346 6.821665 TGAGAGAATTCCTTATTTAACCACCG 59.178 38.462 0.65 0.00 0.00 4.94
487 3347 6.120220 AGAGAATTCCTTATTTAACCACCGG 58.880 40.000 0.00 0.00 0.00 5.28
492 3352 4.516323 TCCTTATTTAACCACCGGCTTAC 58.484 43.478 0.00 0.00 0.00 2.34
502 3362 3.133183 ACCACCGGCTTACATTTTGTTTT 59.867 39.130 0.00 0.00 0.00 2.43
504 3364 4.500716 CCACCGGCTTACATTTTGTTTTCT 60.501 41.667 0.00 0.00 0.00 2.52
509 3369 6.128849 CCGGCTTACATTTTGTTTTCTCATTG 60.129 38.462 0.00 0.00 0.00 2.82
523 3384 8.149647 TGTTTTCTCATTGGCACTGAAAAATAT 58.850 29.630 19.79 0.00 38.03 1.28
567 4126 8.682936 ATGAGTCTAAGTTTATGCCCTTTATG 57.317 34.615 0.00 0.00 0.00 1.90
575 4134 8.644374 AAGTTTATGCCCTTTATGACACTTTA 57.356 30.769 0.00 0.00 0.00 1.85
594 4153 8.573885 ACACTTTAGTCCATTTTAAGCCTTAAC 58.426 33.333 0.00 0.00 0.00 2.01
596 4155 8.793592 ACTTTAGTCCATTTTAAGCCTTAACAG 58.206 33.333 0.00 0.00 0.00 3.16
598 4157 6.575162 AGTCCATTTTAAGCCTTAACAGTG 57.425 37.500 0.00 0.00 0.00 3.66
599 4158 6.068670 AGTCCATTTTAAGCCTTAACAGTGT 58.931 36.000 0.00 0.00 0.00 3.55
600 4159 6.549736 AGTCCATTTTAAGCCTTAACAGTGTT 59.450 34.615 14.05 14.05 0.00 3.32
601 4160 7.722285 AGTCCATTTTAAGCCTTAACAGTGTTA 59.278 33.333 11.75 11.75 0.00 2.41
604 4163 9.705290 CCATTTTAAGCCTTAACAGTGTTAAAT 57.295 29.630 24.70 14.18 0.00 1.40
607 4166 9.738832 TTTTAAGCCTTAACAGTGTTAAATGAC 57.261 29.630 24.70 15.62 0.00 3.06
608 4167 6.952773 AAGCCTTAACAGTGTTAAATGACA 57.047 33.333 24.70 6.34 0.00 3.58
609 4168 7.524717 AAGCCTTAACAGTGTTAAATGACAT 57.475 32.000 24.70 10.04 0.00 3.06
610 4169 7.145932 AGCCTTAACAGTGTTAAATGACATC 57.854 36.000 24.70 11.43 0.00 3.06
611 4170 6.714810 AGCCTTAACAGTGTTAAATGACATCA 59.285 34.615 24.70 4.42 0.00 3.07
612 4171 7.023575 GCCTTAACAGTGTTAAATGACATCAG 58.976 38.462 24.70 12.46 0.00 2.90
613 4172 7.094805 GCCTTAACAGTGTTAAATGACATCAGA 60.095 37.037 24.70 3.32 0.00 3.27
619 4178 8.345565 ACAGTGTTAAATGACATCAGAAAAGAC 58.654 33.333 0.00 0.00 0.00 3.01
620 4179 7.805071 CAGTGTTAAATGACATCAGAAAAGACC 59.195 37.037 0.00 0.00 0.00 3.85
622 4181 8.352942 GTGTTAAATGACATCAGAAAAGACCTT 58.647 33.333 0.00 0.00 0.00 3.50
623 4182 8.912988 TGTTAAATGACATCAGAAAAGACCTTT 58.087 29.630 0.00 0.00 0.00 3.11
624 4183 9.399403 GTTAAATGACATCAGAAAAGACCTTTC 57.601 33.333 0.00 0.00 43.36 2.62
782 4393 0.598065 ATGAAGTTTCAACGCCTGGC 59.402 50.000 9.11 9.11 41.13 4.85
826 4437 2.359967 CCTCCCCGACAACTCCTCC 61.360 68.421 0.00 0.00 0.00 4.30
929 4546 0.317160 ATGACCTCGTTCTCGTTGCA 59.683 50.000 0.00 0.00 38.33 4.08
948 4565 1.061570 GCGCGCATCCTTCTTCTTG 59.938 57.895 29.10 0.00 0.00 3.02
998 4619 5.113502 TCTACTCGATCGATCACTACGTA 57.886 43.478 24.40 13.70 0.00 3.57
1290 4911 1.077644 CGACGAGGAGGAGGAGGAA 60.078 63.158 0.00 0.00 0.00 3.36
1293 4914 0.033894 ACGAGGAGGAGGAGGAAGAC 60.034 60.000 0.00 0.00 0.00 3.01
1296 4917 0.033894 AGGAGGAGGAGGAAGACGAC 60.034 60.000 0.00 0.00 0.00 4.34
1298 4919 1.378124 GAGGAGGAGGAAGACGACGG 61.378 65.000 0.00 0.00 0.00 4.79
1299 4920 2.490685 GAGGAGGAAGACGACGGC 59.509 66.667 0.00 0.00 0.00 5.68
1305 4926 2.100603 GAAGACGACGGCGAGGAG 59.899 66.667 22.49 3.86 41.64 3.69
1431 5064 2.900273 GGCAGCATGTACGAGGGA 59.100 61.111 0.00 0.00 39.31 4.20
1998 5631 4.329545 GTGACGGAGGGCAAGGCA 62.330 66.667 0.00 0.00 0.00 4.75
2412 6163 2.123897 GCCGCCCTCTCTCTCTCT 60.124 66.667 0.00 0.00 0.00 3.10
2413 6164 2.193536 GCCGCCCTCTCTCTCTCTC 61.194 68.421 0.00 0.00 0.00 3.20
2414 6165 1.531748 CCGCCCTCTCTCTCTCTCT 59.468 63.158 0.00 0.00 0.00 3.10
2415 6166 0.535102 CCGCCCTCTCTCTCTCTCTC 60.535 65.000 0.00 0.00 0.00 3.20
2416 6167 0.469917 CGCCCTCTCTCTCTCTCTCT 59.530 60.000 0.00 0.00 0.00 3.10
2417 6168 1.541233 CGCCCTCTCTCTCTCTCTCTC 60.541 61.905 0.00 0.00 0.00 3.20
2418 6169 1.771255 GCCCTCTCTCTCTCTCTCTCT 59.229 57.143 0.00 0.00 0.00 3.10
2419 6170 2.224402 GCCCTCTCTCTCTCTCTCTCTC 60.224 59.091 0.00 0.00 0.00 3.20
2420 6171 3.312890 CCCTCTCTCTCTCTCTCTCTCT 58.687 54.545 0.00 0.00 0.00 3.10
2421 6172 3.323403 CCCTCTCTCTCTCTCTCTCTCTC 59.677 56.522 0.00 0.00 0.00 3.20
2422 6173 4.222336 CCTCTCTCTCTCTCTCTCTCTCT 58.778 52.174 0.00 0.00 0.00 3.10
2423 6174 4.280677 CCTCTCTCTCTCTCTCTCTCTCTC 59.719 54.167 0.00 0.00 0.00 3.20
2424 6175 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
2425 6176 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2426 6177 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2427 6178 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2428 6179 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2429 6180 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2430 6181 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2431 6182 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2432 6183 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2433 6184 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2434 6185 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2435 6186 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2436 6187 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2437 6188 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2438 6189 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2439 6190 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2440 6191 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2441 6192 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2442 6193 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2443 6194 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2444 6195 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2445 6196 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2446 6197 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2447 6198 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2448 6199 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2449 6200 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2450 6201 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2451 6202 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2452 6203 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2453 6204 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2454 6205 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2455 6206 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2456 6207 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2603 6373 0.326264 CCCAAGGAGAAGGTGTGGAG 59.674 60.000 0.00 0.00 0.00 3.86
2673 6443 2.102588 CGATTTCCGGTGGAAGGACTAT 59.897 50.000 0.00 0.00 43.06 2.12
2735 6505 6.868622 TCGGATTTCCTTTTTCACTTTTCAA 58.131 32.000 0.00 0.00 0.00 2.69
2769 6540 4.641541 TGACCAATATTGACTGCATCCAAG 59.358 41.667 17.23 0.00 0.00 3.61
2783 6554 4.202233 TGCATCCAAGCATGTTTTGAGAAA 60.202 37.500 12.00 0.00 40.11 2.52
2784 6555 4.751098 GCATCCAAGCATGTTTTGAGAAAA 59.249 37.500 12.00 0.00 0.00 2.29
2794 6565 9.045223 AGCATGTTTTGAGAAAATTTAGGTTTC 57.955 29.630 0.00 0.00 35.60 2.78
2805 6581 9.476202 AGAAAATTTAGGTTTCCTTTGAATTCG 57.524 29.630 0.04 0.00 35.92 3.34
2806 6582 8.601845 AAAATTTAGGTTTCCTTTGAATTCGG 57.398 30.769 0.04 0.00 34.61 4.30
2814 6590 0.243636 CTTTGAATTCGGGTGCCACC 59.756 55.000 4.93 4.93 37.60 4.61
2910 6954 8.854614 AACCCTTAGATTGATTATATCAGTGC 57.145 34.615 0.00 0.00 40.94 4.40
2964 7170 9.631452 GTACTACCACGAGTCTTTAAAAATACT 57.369 33.333 0.00 0.00 0.00 2.12
2965 7171 8.754230 ACTACCACGAGTCTTTAAAAATACTC 57.246 34.615 9.69 9.69 38.21 2.59
2966 7172 7.816513 ACTACCACGAGTCTTTAAAAATACTCC 59.183 37.037 12.63 0.72 38.29 3.85
2967 7173 5.936372 ACCACGAGTCTTTAAAAATACTCCC 59.064 40.000 12.63 0.00 38.29 4.30
2968 7174 6.171213 CCACGAGTCTTTAAAAATACTCCCT 58.829 40.000 12.63 0.34 38.29 4.20
2969 7175 6.313164 CCACGAGTCTTTAAAAATACTCCCTC 59.687 42.308 12.63 0.00 38.29 4.30
2970 7176 6.313164 CACGAGTCTTTAAAAATACTCCCTCC 59.687 42.308 12.63 0.00 38.29 4.30
2971 7177 5.519206 CGAGTCTTTAAAAATACTCCCTCCG 59.481 44.000 12.63 1.95 38.29 4.63
2972 7178 6.370186 AGTCTTTAAAAATACTCCCTCCGT 57.630 37.500 0.00 0.00 0.00 4.69
2973 7179 6.404708 AGTCTTTAAAAATACTCCCTCCGTC 58.595 40.000 0.00 0.00 0.00 4.79
2974 7180 5.583854 GTCTTTAAAAATACTCCCTCCGTCC 59.416 44.000 0.00 0.00 0.00 4.79
2975 7181 4.492494 TTAAAAATACTCCCTCCGTCCC 57.508 45.455 0.00 0.00 0.00 4.46
2976 7182 1.961133 AAAATACTCCCTCCGTCCCA 58.039 50.000 0.00 0.00 0.00 4.37
2977 7183 2.191981 AAATACTCCCTCCGTCCCAT 57.808 50.000 0.00 0.00 0.00 4.00
2978 7184 3.339713 AAATACTCCCTCCGTCCCATA 57.660 47.619 0.00 0.00 0.00 2.74
2979 7185 3.339713 AATACTCCCTCCGTCCCATAA 57.660 47.619 0.00 0.00 0.00 1.90
2980 7186 3.562108 ATACTCCCTCCGTCCCATAAT 57.438 47.619 0.00 0.00 0.00 1.28
2981 7187 4.687262 ATACTCCCTCCGTCCCATAATA 57.313 45.455 0.00 0.00 0.00 0.98
2982 7188 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
2983 7189 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
2984 7190 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
2985 7191 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
2986 7192 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
2987 7193 5.657446 TCCCTCCGTCCCATAATATAAGAA 58.343 41.667 0.00 0.00 0.00 2.52
2988 7194 5.482878 TCCCTCCGTCCCATAATATAAGAAC 59.517 44.000 0.00 0.00 0.00 3.01
2989 7195 5.408356 CCTCCGTCCCATAATATAAGAACG 58.592 45.833 0.00 0.00 0.00 3.95
2990 7196 5.047519 CCTCCGTCCCATAATATAAGAACGT 60.048 44.000 0.00 0.00 0.00 3.99
2991 7197 6.409524 TCCGTCCCATAATATAAGAACGTT 57.590 37.500 0.00 0.00 0.00 3.99
2992 7198 6.819284 TCCGTCCCATAATATAAGAACGTTT 58.181 36.000 0.46 0.00 0.00 3.60
2993 7199 7.274447 TCCGTCCCATAATATAAGAACGTTTT 58.726 34.615 0.46 0.00 0.00 2.43
2994 7200 7.769970 TCCGTCCCATAATATAAGAACGTTTTT 59.230 33.333 9.22 9.22 0.00 1.94
2995 7201 7.853929 CCGTCCCATAATATAAGAACGTTTTTG 59.146 37.037 13.87 0.00 0.00 2.44
2996 7202 7.853929 CGTCCCATAATATAAGAACGTTTTTGG 59.146 37.037 13.87 5.54 0.00 3.28
2997 7203 7.646526 GTCCCATAATATAAGAACGTTTTTGGC 59.353 37.037 13.87 0.00 0.00 4.52
2998 7204 7.339721 TCCCATAATATAAGAACGTTTTTGGCA 59.660 33.333 13.87 0.01 0.00 4.92
2999 7205 7.434013 CCCATAATATAAGAACGTTTTTGGCAC 59.566 37.037 13.87 0.00 0.00 5.01
3000 7206 8.188139 CCATAATATAAGAACGTTTTTGGCACT 58.812 33.333 13.87 0.00 0.00 4.40
3003 7209 7.916914 ATATAAGAACGTTTTTGGCACTAGT 57.083 32.000 13.87 0.00 0.00 2.57
3004 7210 3.963383 AGAACGTTTTTGGCACTAGTG 57.037 42.857 18.93 18.93 0.00 2.74
3005 7211 3.275999 AGAACGTTTTTGGCACTAGTGT 58.724 40.909 23.44 0.00 0.00 3.55
3006 7212 4.444536 AGAACGTTTTTGGCACTAGTGTA 58.555 39.130 23.44 10.89 0.00 2.90
3007 7213 4.877251 AGAACGTTTTTGGCACTAGTGTAA 59.123 37.500 23.44 15.88 0.00 2.41
3008 7214 5.529800 AGAACGTTTTTGGCACTAGTGTAAT 59.470 36.000 23.44 4.41 0.00 1.89
3009 7215 5.103290 ACGTTTTTGGCACTAGTGTAATG 57.897 39.130 23.44 15.87 0.00 1.90
3010 7216 4.577283 ACGTTTTTGGCACTAGTGTAATGT 59.423 37.500 23.44 16.38 0.00 2.71
3011 7217 5.066764 ACGTTTTTGGCACTAGTGTAATGTT 59.933 36.000 23.44 0.00 0.00 2.71
3012 7218 6.260493 ACGTTTTTGGCACTAGTGTAATGTTA 59.740 34.615 23.44 3.03 0.00 2.41
3013 7219 7.133513 CGTTTTTGGCACTAGTGTAATGTTAA 58.866 34.615 23.44 8.28 0.00 2.01
3014 7220 7.644551 CGTTTTTGGCACTAGTGTAATGTTAAA 59.355 33.333 23.44 12.80 0.00 1.52
3015 7221 9.303537 GTTTTTGGCACTAGTGTAATGTTAAAA 57.696 29.630 23.44 15.65 0.00 1.52
3016 7222 9.871238 TTTTTGGCACTAGTGTAATGTTAAAAA 57.129 25.926 23.44 19.14 0.00 1.94
3017 7223 8.859517 TTTGGCACTAGTGTAATGTTAAAAAC 57.140 30.769 23.44 2.54 0.00 2.43
3018 7224 6.660722 TGGCACTAGTGTAATGTTAAAAACG 58.339 36.000 23.44 0.00 0.00 3.60
3019 7225 6.260493 TGGCACTAGTGTAATGTTAAAAACGT 59.740 34.615 23.44 0.00 0.00 3.99
3020 7226 7.134163 GGCACTAGTGTAATGTTAAAAACGTT 58.866 34.615 23.44 0.00 42.83 3.99
3021 7227 7.321984 GGCACTAGTGTAATGTTAAAAACGTTC 59.678 37.037 23.44 0.78 40.80 3.95
3022 7228 8.066000 GCACTAGTGTAATGTTAAAAACGTTCT 58.934 33.333 23.44 0.00 40.80 3.01
3023 7229 9.925268 CACTAGTGTAATGTTAAAAACGTTCTT 57.075 29.630 15.06 0.00 40.80 2.52
3038 7244 7.989416 AAACGTTCTTATATTTTGGGACAGA 57.011 32.000 0.00 0.00 42.39 3.41
3039 7245 7.611213 AACGTTCTTATATTTTGGGACAGAG 57.389 36.000 0.00 0.00 42.39 3.35
3040 7246 6.113411 ACGTTCTTATATTTTGGGACAGAGG 58.887 40.000 0.00 0.00 42.39 3.69
3041 7247 5.527582 CGTTCTTATATTTTGGGACAGAGGG 59.472 44.000 0.00 0.00 42.39 4.30
3042 7248 6.631766 CGTTCTTATATTTTGGGACAGAGGGA 60.632 42.308 0.00 0.00 42.39 4.20
3043 7249 6.500589 TCTTATATTTTGGGACAGAGGGAG 57.499 41.667 0.00 0.00 42.39 4.30
3044 7250 5.970640 TCTTATATTTTGGGACAGAGGGAGT 59.029 40.000 0.00 0.00 42.39 3.85
3045 7251 7.136885 TCTTATATTTTGGGACAGAGGGAGTA 58.863 38.462 0.00 0.00 42.39 2.59
3046 7252 5.632034 ATATTTTGGGACAGAGGGAGTAC 57.368 43.478 0.00 0.00 42.39 2.73
3047 7253 2.715763 TTTGGGACAGAGGGAGTACT 57.284 50.000 0.00 0.00 42.39 2.73
3048 7254 2.715763 TTGGGACAGAGGGAGTACTT 57.284 50.000 0.00 0.00 42.39 2.24
3049 7255 3.839323 TTGGGACAGAGGGAGTACTTA 57.161 47.619 0.00 0.00 42.39 2.24
3050 7256 4.348020 TTGGGACAGAGGGAGTACTTAT 57.652 45.455 0.00 0.00 42.39 1.73
3165 7372 7.980742 AAGAAAACTGAAACCGAAAATACAC 57.019 32.000 0.00 0.00 0.00 2.90
3301 7510 0.953727 TTGCATGTTGAGGTGACTGC 59.046 50.000 0.00 0.00 44.43 4.40
3314 7557 2.159421 GGTGACTGCTTGCATCTTGATG 60.159 50.000 6.27 6.27 0.00 3.07
3318 7561 2.490903 ACTGCTTGCATCTTGATGGAAC 59.509 45.455 12.38 10.37 0.00 3.62
3331 7574 7.482169 TCTTGATGGAACTATGTTAGTGAGT 57.518 36.000 0.00 0.00 39.39 3.41
3373 7616 6.957631 ACATGATGACATTTTGGTCCTACTA 58.042 36.000 0.00 0.00 36.97 1.82
3383 7626 1.562475 TGGTCCTACTAATGGCCCAAC 59.438 52.381 0.00 0.00 0.00 3.77
3384 7627 1.844497 GGTCCTACTAATGGCCCAACT 59.156 52.381 0.00 0.00 0.00 3.16
3385 7628 2.241430 GGTCCTACTAATGGCCCAACTT 59.759 50.000 0.00 0.00 0.00 2.66
3386 7629 3.308904 GGTCCTACTAATGGCCCAACTTT 60.309 47.826 0.00 0.00 0.00 2.66
3387 7630 4.341487 GTCCTACTAATGGCCCAACTTTT 58.659 43.478 0.00 0.00 0.00 2.27
3388 7631 5.503002 GTCCTACTAATGGCCCAACTTTTA 58.497 41.667 0.00 0.00 0.00 1.52
3389 7632 5.589050 GTCCTACTAATGGCCCAACTTTTAG 59.411 44.000 0.00 0.00 0.00 1.85
3390 7633 5.489637 TCCTACTAATGGCCCAACTTTTAGA 59.510 40.000 8.47 0.00 0.00 2.10
3391 7634 6.012333 TCCTACTAATGGCCCAACTTTTAGAA 60.012 38.462 8.47 0.00 0.00 2.10
3392 7635 5.977489 ACTAATGGCCCAACTTTTAGAAC 57.023 39.130 8.47 0.00 0.00 3.01
3393 7636 5.641155 ACTAATGGCCCAACTTTTAGAACT 58.359 37.500 8.47 0.00 0.00 3.01
3394 7637 6.075315 ACTAATGGCCCAACTTTTAGAACTT 58.925 36.000 8.47 0.00 0.00 2.66
3395 7638 5.887214 AATGGCCCAACTTTTAGAACTTT 57.113 34.783 0.00 0.00 0.00 2.66
3396 7639 6.987403 AATGGCCCAACTTTTAGAACTTTA 57.013 33.333 0.00 0.00 0.00 1.85
3397 7640 6.987403 ATGGCCCAACTTTTAGAACTTTAA 57.013 33.333 0.00 0.00 0.00 1.52
3398 7641 6.987403 TGGCCCAACTTTTAGAACTTTAAT 57.013 33.333 0.00 0.00 0.00 1.40
3399 7642 6.988522 TGGCCCAACTTTTAGAACTTTAATC 58.011 36.000 0.00 0.00 0.00 1.75
3400 7643 6.551601 TGGCCCAACTTTTAGAACTTTAATCA 59.448 34.615 0.00 0.00 0.00 2.57
3401 7644 6.866770 GGCCCAACTTTTAGAACTTTAATCAC 59.133 38.462 0.00 0.00 0.00 3.06
3402 7645 6.866770 GCCCAACTTTTAGAACTTTAATCACC 59.133 38.462 0.00 0.00 0.00 4.02
3403 7646 7.255836 GCCCAACTTTTAGAACTTTAATCACCT 60.256 37.037 0.00 0.00 0.00 4.00
3404 7647 9.292195 CCCAACTTTTAGAACTTTAATCACCTA 57.708 33.333 0.00 0.00 0.00 3.08
3433 7676 8.682936 AGTTATAGATGATGACATTTTGGTCC 57.317 34.615 0.00 0.00 36.82 4.46
3434 7677 8.497745 AGTTATAGATGATGACATTTTGGTCCT 58.502 33.333 0.00 0.00 36.82 3.85
3435 7678 9.778741 GTTATAGATGATGACATTTTGGTCCTA 57.221 33.333 0.00 0.00 36.82 2.94
3436 7679 9.778741 TTATAGATGATGACATTTTGGTCCTAC 57.221 33.333 0.00 0.00 36.82 3.18
3437 7680 6.319048 AGATGATGACATTTTGGTCCTACT 57.681 37.500 0.00 0.00 36.82 2.57
3438 7681 6.118170 AGATGATGACATTTTGGTCCTACTG 58.882 40.000 0.00 0.00 36.82 2.74
3439 7682 5.497464 TGATGACATTTTGGTCCTACTGA 57.503 39.130 0.00 0.00 36.97 3.41
3440 7683 6.065976 TGATGACATTTTGGTCCTACTGAT 57.934 37.500 0.00 0.00 36.97 2.90
3441 7684 5.882000 TGATGACATTTTGGTCCTACTGATG 59.118 40.000 0.00 0.00 36.97 3.07
3442 7685 4.588899 TGACATTTTGGTCCTACTGATGG 58.411 43.478 0.00 0.00 36.97 3.51
3443 7686 3.356290 ACATTTTGGTCCTACTGATGGC 58.644 45.455 0.00 0.00 0.00 4.40
3444 7687 2.507407 TTTTGGTCCTACTGATGGCC 57.493 50.000 0.00 0.00 0.00 5.36
3445 7688 0.623723 TTTGGTCCTACTGATGGCCC 59.376 55.000 0.00 0.00 0.00 5.80
3446 7689 1.622607 TTGGTCCTACTGATGGCCCG 61.623 60.000 0.00 0.00 0.00 6.13
3447 7690 1.760875 GGTCCTACTGATGGCCCGA 60.761 63.158 0.00 0.00 0.00 5.14
3657 7909 2.159462 GCCCAAAAGATCAGCTTTCGAG 60.159 50.000 0.00 0.00 45.85 4.04
3681 7935 2.757099 GGGGGTGCTTGCCATCTG 60.757 66.667 0.00 0.00 0.00 2.90
3777 8031 1.300620 CTTTGACGTCGACCCAGCA 60.301 57.895 10.58 0.00 0.00 4.41
4302 8558 3.006323 GCTCTCACTATGGGATTCATCGT 59.994 47.826 0.00 0.00 37.30 3.73
4451 8707 2.887152 AGGAGTTTTGCAGGTGAATGTC 59.113 45.455 0.00 0.00 0.00 3.06
4461 8717 5.744171 TGCAGGTGAATGTCTACATATGTT 58.256 37.500 14.77 0.00 35.10 2.71
4731 8988 3.436704 TGGCATTCACTTCAAAGATCGAC 59.563 43.478 0.00 0.00 0.00 4.20
4773 9030 7.254795 CCCATGGAATACTTCGTTTCTTATGAC 60.255 40.741 15.22 0.00 0.00 3.06
4813 9089 6.019108 ACTCTGGGAAATAGCCTGAAAAATT 58.981 36.000 0.00 0.00 0.00 1.82
4911 9187 1.064017 TCCCCATTCCAATGTACCTGC 60.064 52.381 0.00 0.00 34.60 4.85
4921 9197 1.414158 ATGTACCTGCTCGCTACCAT 58.586 50.000 0.00 0.00 0.00 3.55
4922 9198 1.191535 TGTACCTGCTCGCTACCATT 58.808 50.000 0.00 0.00 0.00 3.16
5042 9323 5.560953 GCACTTCTTCAGTTGAACATGGTAC 60.561 44.000 0.00 0.00 30.92 3.34
5099 9382 6.039382 ACAAACCAACTACCAACTGAAAGATC 59.961 38.462 0.00 0.00 37.43 2.75
5131 9414 5.002516 CAGCTGAAGAATCTTCCAAGTCTT 58.997 41.667 19.16 0.92 33.07 3.01
5142 9425 4.756642 TCTTCCAAGTCTTACAACATGCTG 59.243 41.667 0.00 0.00 0.00 4.41
5197 9486 0.904865 TGCAGTCGAGGGTGGAGAAT 60.905 55.000 0.00 0.00 0.00 2.40
5428 9717 1.561643 TCTACAGGGCCTTCACTGAG 58.438 55.000 1.32 6.75 38.09 3.35
5509 9798 3.399330 TGTTGGATCGTTCTTTCTGTCC 58.601 45.455 0.00 0.00 0.00 4.02
5522 9811 1.371022 CTGTCCGAGATCGATGGCG 60.371 63.158 0.54 6.05 43.02 5.69
5605 9895 5.105853 TCCTCCTTTCCTTAACTGGGTAAT 58.894 41.667 0.00 0.00 0.00 1.89
5714 10008 5.627499 TCTTAATAAATCGCATCATGGCC 57.373 39.130 0.00 0.00 0.00 5.36
5716 10010 1.549203 ATAAATCGCATCATGGCCCC 58.451 50.000 0.00 0.00 0.00 5.80
5751 10045 9.740239 CCATGTTGATCCTTAATTTGTCAATAG 57.260 33.333 0.00 0.00 32.19 1.73
5802 10104 3.469863 TTGGTTTCAGCTCGGGCGT 62.470 57.895 0.00 0.00 44.37 5.68
5915 10217 0.107456 ATAGCCACCGGAAGATGCAG 59.893 55.000 9.46 0.00 0.00 4.41
5964 10266 2.811317 CCCTGAGCTTGTCGTCGC 60.811 66.667 0.00 0.00 0.00 5.19
6020 10322 2.123251 TCCTCCCTCATCTCGCCC 60.123 66.667 0.00 0.00 0.00 6.13
6158 10460 1.153349 GAAGAAGGCCCCGCTAGTG 60.153 63.158 0.00 0.00 0.00 2.74
6189 10491 3.672295 CTGTGAGCCTCGAAGCCCC 62.672 68.421 1.47 0.00 0.00 5.80
6329 10631 5.073311 AGCGCTCATGGATTATATACGTT 57.927 39.130 2.64 0.00 0.00 3.99
6365 10667 4.625800 CCACTTGGCCACTAGAGC 57.374 61.111 3.88 0.00 0.00 4.09
6380 10682 1.137825 GAGCAGAGCGAGTAAGCGT 59.862 57.895 0.00 0.00 43.00 5.07
6385 10687 0.109689 AGAGCGAGTAAGCGTCACAC 60.110 55.000 0.00 0.00 43.00 3.82
6389 10691 1.063951 CGAGTAAGCGTCACACGGAC 61.064 60.000 0.00 0.00 42.82 4.79
6419 10721 2.339418 CGGGCACGTAACAATCTTGTA 58.661 47.619 0.00 0.00 36.37 2.41
6437 10739 2.193447 GTAACGCGCTGATCATCTTGA 58.807 47.619 5.73 0.00 0.00 3.02
6443 10745 3.615614 GCGCTGATCATCTTGATTTGTC 58.384 45.455 0.00 0.00 37.20 3.18
6500 10802 1.822990 TGATCTGTTCTCGGTACCACC 59.177 52.381 13.54 0.00 34.05 4.61
6504 10806 0.901580 TGTTCTCGGTACCACCCCTC 60.902 60.000 13.54 0.00 33.75 4.30
6508 10810 0.613853 CTCGGTACCACCCCTCTTGA 60.614 60.000 13.54 0.00 33.75 3.02
6518 10820 5.711698 ACCACCCCTCTTGAAAGAAAATTA 58.288 37.500 0.00 0.00 34.03 1.40
6519 10821 6.322931 ACCACCCCTCTTGAAAGAAAATTAT 58.677 36.000 0.00 0.00 34.03 1.28
6520 10822 6.437477 ACCACCCCTCTTGAAAGAAAATTATC 59.563 38.462 0.00 0.00 34.03 1.75
6521 10823 6.404734 CCACCCCTCTTGAAAGAAAATTATCG 60.405 42.308 0.00 0.00 34.03 2.92
6522 10824 6.374333 CACCCCTCTTGAAAGAAAATTATCGA 59.626 38.462 0.00 0.00 34.03 3.59
6523 10825 6.599638 ACCCCTCTTGAAAGAAAATTATCGAG 59.400 38.462 0.00 0.00 34.03 4.04
6524 10826 6.038714 CCCCTCTTGAAAGAAAATTATCGAGG 59.961 42.308 0.00 0.00 34.03 4.63
6525 10827 6.599638 CCCTCTTGAAAGAAAATTATCGAGGT 59.400 38.462 0.00 0.00 34.03 3.85
6526 10828 7.769044 CCCTCTTGAAAGAAAATTATCGAGGTA 59.231 37.037 0.00 0.00 34.03 3.08
6527 10829 9.162764 CCTCTTGAAAGAAAATTATCGAGGTAA 57.837 33.333 0.00 0.00 34.03 2.85
6536 10838 9.712305 AGAAAATTATCGAGGTAATATCACTGG 57.288 33.333 0.00 0.00 0.00 4.00
6537 10839 9.490379 GAAAATTATCGAGGTAATATCACTGGT 57.510 33.333 0.00 0.00 0.00 4.00
6540 10842 8.880991 ATTATCGAGGTAATATCACTGGTAGT 57.119 34.615 0.00 0.00 0.00 2.73
6541 10843 6.821031 ATCGAGGTAATATCACTGGTAGTC 57.179 41.667 0.00 0.00 0.00 2.59
6542 10844 5.687780 TCGAGGTAATATCACTGGTAGTCA 58.312 41.667 0.00 0.00 0.00 3.41
6543 10845 5.530171 TCGAGGTAATATCACTGGTAGTCAC 59.470 44.000 0.00 0.00 0.00 3.67
6544 10846 5.531659 CGAGGTAATATCACTGGTAGTCACT 59.468 44.000 0.00 0.00 0.00 3.41
6545 10847 6.709397 CGAGGTAATATCACTGGTAGTCACTA 59.291 42.308 0.00 0.00 0.00 2.74
6546 10848 7.228108 CGAGGTAATATCACTGGTAGTCACTAA 59.772 40.741 0.00 0.00 0.00 2.24
6547 10849 8.834004 AGGTAATATCACTGGTAGTCACTAAA 57.166 34.615 0.00 0.00 0.00 1.85
6548 10850 9.435570 AGGTAATATCACTGGTAGTCACTAAAT 57.564 33.333 0.00 0.00 0.00 1.40
6552 10854 9.959721 AATATCACTGGTAGTCACTAAATTTGT 57.040 29.630 0.00 0.00 0.00 2.83
6553 10855 7.672983 ATCACTGGTAGTCACTAAATTTGTG 57.327 36.000 0.00 7.57 36.82 3.33
6554 10856 6.588204 TCACTGGTAGTCACTAAATTTGTGT 58.412 36.000 15.62 6.71 36.83 3.72
6555 10857 6.704493 TCACTGGTAGTCACTAAATTTGTGTC 59.296 38.462 15.62 12.12 36.83 3.67
6556 10858 5.694910 ACTGGTAGTCACTAAATTTGTGTCG 59.305 40.000 15.62 5.56 36.83 4.35
6557 10859 5.845103 TGGTAGTCACTAAATTTGTGTCGA 58.155 37.500 15.62 7.94 36.83 4.20
6558 10860 6.282167 TGGTAGTCACTAAATTTGTGTCGAA 58.718 36.000 15.62 6.44 36.83 3.71
6559 10861 6.932400 TGGTAGTCACTAAATTTGTGTCGAAT 59.068 34.615 15.62 9.91 36.83 3.34
6560 10862 7.095397 TGGTAGTCACTAAATTTGTGTCGAATG 60.095 37.037 15.62 0.00 36.83 2.67
6561 10863 6.861065 AGTCACTAAATTTGTGTCGAATGT 57.139 33.333 15.62 0.00 36.83 2.71
6562 10864 6.658831 AGTCACTAAATTTGTGTCGAATGTG 58.341 36.000 15.62 0.00 36.83 3.21
6563 10865 5.339611 GTCACTAAATTTGTGTCGAATGTGC 59.660 40.000 15.62 0.00 36.83 4.57
6564 10866 5.008118 TCACTAAATTTGTGTCGAATGTGCA 59.992 36.000 15.62 0.00 36.83 4.57
6565 10867 5.340403 CACTAAATTTGTGTCGAATGTGCAG 59.660 40.000 0.00 0.00 0.00 4.41
6566 10868 3.988379 AATTTGTGTCGAATGTGCAGT 57.012 38.095 0.00 0.00 0.00 4.40
6567 10869 3.988379 ATTTGTGTCGAATGTGCAGTT 57.012 38.095 0.00 0.00 0.00 3.16
6568 10870 3.773860 TTTGTGTCGAATGTGCAGTTT 57.226 38.095 0.00 0.00 0.00 2.66
6569 10871 3.773860 TTGTGTCGAATGTGCAGTTTT 57.226 38.095 0.00 0.00 0.00 2.43
6570 10872 3.063670 TGTGTCGAATGTGCAGTTTTG 57.936 42.857 0.00 0.00 0.00 2.44
6571 10873 2.421775 TGTGTCGAATGTGCAGTTTTGT 59.578 40.909 0.00 0.00 0.00 2.83
6572 10874 2.783284 GTGTCGAATGTGCAGTTTTGTG 59.217 45.455 0.00 0.00 0.00 3.33
6573 10875 1.780860 GTCGAATGTGCAGTTTTGTGC 59.219 47.619 0.00 0.00 44.27 4.57
6574 10876 1.675483 TCGAATGTGCAGTTTTGTGCT 59.325 42.857 0.00 0.00 44.32 4.40
6575 10877 2.875317 TCGAATGTGCAGTTTTGTGCTA 59.125 40.909 0.00 0.00 44.32 3.49
6576 10878 3.058983 TCGAATGTGCAGTTTTGTGCTAG 60.059 43.478 0.00 0.00 44.32 3.42
6577 10879 3.058983 CGAATGTGCAGTTTTGTGCTAGA 60.059 43.478 0.00 0.00 44.32 2.43
6578 10880 4.378770 CGAATGTGCAGTTTTGTGCTAGAT 60.379 41.667 0.00 0.00 44.32 1.98
6579 10881 4.691860 ATGTGCAGTTTTGTGCTAGATC 57.308 40.909 0.00 0.00 44.32 2.75
6580 10882 3.743521 TGTGCAGTTTTGTGCTAGATCT 58.256 40.909 0.00 0.00 44.32 2.75
6581 10883 4.136796 TGTGCAGTTTTGTGCTAGATCTT 58.863 39.130 0.00 0.00 44.32 2.40
6582 10884 4.580167 TGTGCAGTTTTGTGCTAGATCTTT 59.420 37.500 0.00 0.00 44.32 2.52
6583 10885 4.913924 GTGCAGTTTTGTGCTAGATCTTTG 59.086 41.667 0.00 0.00 44.32 2.77
6584 10886 4.821260 TGCAGTTTTGTGCTAGATCTTTGA 59.179 37.500 0.00 0.00 44.32 2.69
6585 10887 5.474532 TGCAGTTTTGTGCTAGATCTTTGAT 59.525 36.000 0.00 0.00 44.32 2.57
6586 10888 6.654582 TGCAGTTTTGTGCTAGATCTTTGATA 59.345 34.615 0.00 0.00 44.32 2.15
6587 10889 7.174772 TGCAGTTTTGTGCTAGATCTTTGATAA 59.825 33.333 0.00 0.00 44.32 1.75
6588 10890 8.186821 GCAGTTTTGTGCTAGATCTTTGATAAT 58.813 33.333 0.00 0.00 40.54 1.28
6591 10893 9.638300 GTTTTGTGCTAGATCTTTGATAATACG 57.362 33.333 0.00 0.00 0.00 3.06
6592 10894 8.942338 TTTGTGCTAGATCTTTGATAATACGT 57.058 30.769 0.00 0.00 0.00 3.57
6593 10895 8.942338 TTGTGCTAGATCTTTGATAATACGTT 57.058 30.769 0.00 0.00 0.00 3.99
6594 10896 8.942338 TGTGCTAGATCTTTGATAATACGTTT 57.058 30.769 0.00 0.00 0.00 3.60
6595 10897 9.378551 TGTGCTAGATCTTTGATAATACGTTTT 57.621 29.630 0.00 0.00 0.00 2.43
6619 10921 8.789881 TTTTCGGTCATACAACTTGTTATTTG 57.210 30.769 0.00 0.00 0.00 2.32
6620 10922 6.489127 TCGGTCATACAACTTGTTATTTGG 57.511 37.500 0.00 0.00 0.00 3.28
6621 10923 5.998981 TCGGTCATACAACTTGTTATTTGGT 59.001 36.000 0.00 0.00 0.00 3.67
6622 10924 6.487331 TCGGTCATACAACTTGTTATTTGGTT 59.513 34.615 0.00 0.00 0.00 3.67
6623 10925 6.799925 CGGTCATACAACTTGTTATTTGGTTC 59.200 38.462 0.00 0.00 0.00 3.62
6624 10926 7.520776 CGGTCATACAACTTGTTATTTGGTTCA 60.521 37.037 0.00 0.00 0.00 3.18
6625 10927 8.138712 GGTCATACAACTTGTTATTTGGTTCAA 58.861 33.333 0.00 0.00 0.00 2.69
6626 10928 9.522804 GTCATACAACTTGTTATTTGGTTCAAA 57.477 29.630 0.00 0.00 37.75 2.69
6630 10932 8.568732 ACAACTTGTTATTTGGTTCAAATACG 57.431 30.769 11.28 5.27 43.24 3.06
6631 10933 7.650104 ACAACTTGTTATTTGGTTCAAATACGG 59.350 33.333 11.28 6.25 43.24 4.02
6632 10934 7.279750 ACTTGTTATTTGGTTCAAATACGGT 57.720 32.000 11.28 6.70 43.24 4.83
6633 10935 7.364970 ACTTGTTATTTGGTTCAAATACGGTC 58.635 34.615 11.28 5.46 43.24 4.79
6634 10936 6.879276 TGTTATTTGGTTCAAATACGGTCA 57.121 33.333 11.28 7.27 43.24 4.02
6635 10937 6.670233 TGTTATTTGGTTCAAATACGGTCAC 58.330 36.000 11.28 8.19 43.24 3.67
6636 10938 6.487331 TGTTATTTGGTTCAAATACGGTCACT 59.513 34.615 11.28 0.00 43.24 3.41
6637 10939 5.622770 ATTTGGTTCAAATACGGTCACTC 57.377 39.130 4.29 0.00 41.50 3.51
6638 10940 4.345859 TTGGTTCAAATACGGTCACTCT 57.654 40.909 0.00 0.00 0.00 3.24
6639 10941 3.659786 TGGTTCAAATACGGTCACTCTG 58.340 45.455 0.00 0.00 0.00 3.35
6640 10942 3.070446 TGGTTCAAATACGGTCACTCTGT 59.930 43.478 0.00 0.00 39.26 3.41
6641 10943 4.062991 GGTTCAAATACGGTCACTCTGTT 58.937 43.478 0.00 0.00 36.91 3.16
6642 10944 4.151867 GGTTCAAATACGGTCACTCTGTTC 59.848 45.833 0.00 0.00 36.91 3.18
6643 10945 4.866508 TCAAATACGGTCACTCTGTTCT 57.133 40.909 0.00 0.00 36.91 3.01
6644 10946 5.970317 TCAAATACGGTCACTCTGTTCTA 57.030 39.130 0.00 0.00 36.91 2.10
6645 10947 5.950883 TCAAATACGGTCACTCTGTTCTAG 58.049 41.667 0.00 0.00 36.91 2.43
6646 10948 4.373348 AATACGGTCACTCTGTTCTAGC 57.627 45.455 0.00 0.00 36.91 3.42
6647 10949 0.522180 ACGGTCACTCTGTTCTAGCG 59.478 55.000 0.00 0.00 37.12 4.26
6648 10950 0.798771 CGGTCACTCTGTTCTAGCGC 60.799 60.000 0.00 0.00 0.00 5.92
6649 10951 0.243907 GGTCACTCTGTTCTAGCGCA 59.756 55.000 11.47 0.00 0.00 6.09
6650 10952 1.134965 GGTCACTCTGTTCTAGCGCAT 60.135 52.381 11.47 0.00 0.00 4.73
6651 10953 1.923204 GTCACTCTGTTCTAGCGCATG 59.077 52.381 11.47 0.79 0.00 4.06
6652 10954 0.649475 CACTCTGTTCTAGCGCATGC 59.351 55.000 11.47 7.91 43.24 4.06
6662 10964 3.935872 GCGCATGCGTATTCGGCA 61.936 61.111 37.54 0.00 42.09 5.69
6663 10965 2.938253 CGCATGCGTATTCGGCAT 59.062 55.556 31.33 0.00 37.56 4.40
6664 10966 1.439201 CGCATGCGTATTCGGCATG 60.439 57.895 31.33 19.34 45.08 4.06
6665 10967 1.648720 GCATGCGTATTCGGCATGT 59.351 52.632 22.90 0.00 44.64 3.21
6666 10968 0.865111 GCATGCGTATTCGGCATGTA 59.135 50.000 22.90 0.00 44.64 2.29
6667 10969 1.464608 GCATGCGTATTCGGCATGTAT 59.535 47.619 22.90 0.00 44.64 2.29
6668 10970 2.725759 GCATGCGTATTCGGCATGTATG 60.726 50.000 22.90 10.16 44.64 2.39
6669 10971 1.507562 TGCGTATTCGGCATGTATGG 58.492 50.000 0.00 0.00 37.56 2.74
6670 10972 0.796312 GCGTATTCGGCATGTATGGG 59.204 55.000 0.00 0.00 37.56 4.00
6671 10973 1.876416 GCGTATTCGGCATGTATGGGT 60.876 52.381 0.00 0.00 37.56 4.51
6672 10974 2.066262 CGTATTCGGCATGTATGGGTC 58.934 52.381 0.00 0.00 0.00 4.46
6673 10975 2.423577 GTATTCGGCATGTATGGGTCC 58.576 52.381 0.00 0.00 0.00 4.46
6674 10976 0.843309 ATTCGGCATGTATGGGTCCA 59.157 50.000 0.00 0.00 0.00 4.02
6675 10977 0.107410 TTCGGCATGTATGGGTCCAC 60.107 55.000 0.00 0.00 0.00 4.02
6676 10978 0.980754 TCGGCATGTATGGGTCCACT 60.981 55.000 0.00 0.00 0.00 4.00
6677 10979 0.815213 CGGCATGTATGGGTCCACTG 60.815 60.000 0.00 0.00 0.00 3.66
6678 10980 0.255890 GGCATGTATGGGTCCACTGT 59.744 55.000 0.00 0.00 0.00 3.55
6679 10981 1.668419 GCATGTATGGGTCCACTGTC 58.332 55.000 0.00 0.00 0.00 3.51
6680 10982 1.065491 GCATGTATGGGTCCACTGTCA 60.065 52.381 0.00 0.00 0.00 3.58
6681 10983 2.910199 CATGTATGGGTCCACTGTCAG 58.090 52.381 0.00 0.00 0.00 3.51
6682 10984 0.613260 TGTATGGGTCCACTGTCAGC 59.387 55.000 0.00 0.00 0.00 4.26
6683 10985 0.460284 GTATGGGTCCACTGTCAGCG 60.460 60.000 0.00 0.00 0.00 5.18
6684 10986 0.613572 TATGGGTCCACTGTCAGCGA 60.614 55.000 0.00 0.00 0.00 4.93
6685 10987 1.892819 ATGGGTCCACTGTCAGCGAG 61.893 60.000 0.00 0.00 0.00 5.03
6686 10988 2.433318 GGTCCACTGTCAGCGAGC 60.433 66.667 0.00 1.93 0.00 5.03
6687 10989 2.653702 GTCCACTGTCAGCGAGCT 59.346 61.111 0.00 0.00 0.00 4.09
6688 10990 1.735920 GTCCACTGTCAGCGAGCTG 60.736 63.158 18.20 18.20 44.86 4.24
6689 10991 3.117171 CCACTGTCAGCGAGCTGC 61.117 66.667 19.33 14.55 43.31 5.25
6698 11000 3.333414 GCGAGCTGCACTGTTTCA 58.667 55.556 1.02 0.00 45.45 2.69
6699 11001 1.206072 GCGAGCTGCACTGTTTCAG 59.794 57.895 1.02 3.25 45.45 3.02
6700 11002 1.224069 GCGAGCTGCACTGTTTCAGA 61.224 55.000 1.02 0.00 45.45 3.27
6701 11003 0.788995 CGAGCTGCACTGTTTCAGAG 59.211 55.000 1.02 0.00 35.18 3.35
6702 11004 0.516439 GAGCTGCACTGTTTCAGAGC 59.484 55.000 1.02 11.09 45.60 4.09
6706 11008 2.605094 GCACTGTTTCAGAGCGACA 58.395 52.632 3.70 0.00 38.17 4.35
6707 11009 0.233332 GCACTGTTTCAGAGCGACAC 59.767 55.000 3.70 0.00 38.17 3.67
6708 11010 0.504384 CACTGTTTCAGAGCGACACG 59.496 55.000 3.70 0.00 35.18 4.49
6709 11011 0.102481 ACTGTTTCAGAGCGACACGT 59.898 50.000 3.70 0.00 35.18 4.49
6710 11012 0.504384 CTGTTTCAGAGCGACACGTG 59.496 55.000 15.48 15.48 32.44 4.49
6711 11013 0.101579 TGTTTCAGAGCGACACGTGA 59.898 50.000 25.01 0.00 0.00 4.35
6712 11014 0.778815 GTTTCAGAGCGACACGTGAG 59.221 55.000 25.01 16.51 0.00 3.51
6713 11015 0.939577 TTTCAGAGCGACACGTGAGC 60.940 55.000 25.01 25.06 0.00 4.26
6714 11016 3.168604 CAGAGCGACACGTGAGCG 61.169 66.667 25.01 24.27 44.93 5.03
6715 11017 3.354645 AGAGCGACACGTGAGCGA 61.355 61.111 29.28 0.00 42.00 4.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
194 199 4.070009 TGCTGTATGGATTCTGATCATGC 58.930 43.478 0.00 0.00 33.77 4.06
225 230 4.164822 AGATGAAAACCACGCATTTCTG 57.835 40.909 0.00 0.00 36.68 3.02
227 232 4.798574 AGAAGATGAAAACCACGCATTTC 58.201 39.130 0.00 0.00 36.35 2.17
233 239 5.931441 AGAAGAAGAAGATGAAAACCACG 57.069 39.130 0.00 0.00 0.00 4.94
259 265 9.844790 TCAAGCAAGATACAAATATGTCTTTTG 57.155 29.630 0.00 0.00 41.05 2.44
304 314 2.280308 TAGGTTGGGGTCCTGCTAAT 57.720 50.000 0.00 0.00 36.60 1.73
309 319 1.633432 TGTTCATAGGTTGGGGTCCTG 59.367 52.381 0.00 0.00 36.60 3.86
369 442 7.029563 GGAAGCAACAAATTGTTACTATCCTG 58.970 38.462 20.54 8.51 38.77 3.86
445 606 4.873010 TCTCTCATATATCTACCCCTGGC 58.127 47.826 0.00 0.00 0.00 4.85
447 608 7.843760 AGGAATTCTCTCATATATCTACCCCTG 59.156 40.741 5.23 0.00 0.00 4.45
464 3324 5.220989 GCCGGTGGTTAAATAAGGAATTCTC 60.221 44.000 1.90 0.00 0.00 2.87
471 3331 4.263435 TGTAAGCCGGTGGTTAAATAAGG 58.737 43.478 1.90 0.00 36.29 2.69
482 3342 4.616953 AGAAAACAAAATGTAAGCCGGTG 58.383 39.130 1.90 0.00 0.00 4.94
483 3343 4.339814 TGAGAAAACAAAATGTAAGCCGGT 59.660 37.500 1.90 0.00 0.00 5.28
484 3344 4.865776 TGAGAAAACAAAATGTAAGCCGG 58.134 39.130 0.00 0.00 0.00 6.13
485 3345 6.128849 CCAATGAGAAAACAAAATGTAAGCCG 60.129 38.462 0.00 0.00 0.00 5.52
486 3346 6.347644 GCCAATGAGAAAACAAAATGTAAGCC 60.348 38.462 0.00 0.00 0.00 4.35
487 3347 6.202570 TGCCAATGAGAAAACAAAATGTAAGC 59.797 34.615 0.00 0.00 0.00 3.09
492 3352 5.754406 TCAGTGCCAATGAGAAAACAAAATG 59.246 36.000 0.00 0.00 0.00 2.32
552 3413 8.051901 ACTAAAGTGTCATAAAGGGCATAAAC 57.948 34.615 0.00 0.00 0.00 2.01
567 4126 6.819397 AGGCTTAAAATGGACTAAAGTGTC 57.181 37.500 0.00 0.00 36.31 3.67
575 4134 6.068670 ACACTGTTAAGGCTTAAAATGGACT 58.931 36.000 20.57 2.68 0.00 3.85
594 4153 7.805071 GGTCTTTTCTGATGTCATTTAACACTG 59.195 37.037 0.00 0.00 30.55 3.66
596 4155 7.875971 AGGTCTTTTCTGATGTCATTTAACAC 58.124 34.615 0.00 0.00 30.55 3.32
598 4157 9.399403 GAAAGGTCTTTTCTGATGTCATTTAAC 57.601 33.333 0.34 0.00 41.61 2.01
612 4171 5.946377 ACATGATGGGTAGAAAGGTCTTTTC 59.054 40.000 0.00 0.00 44.52 2.29
613 4172 5.711976 CACATGATGGGTAGAAAGGTCTTTT 59.288 40.000 0.00 0.00 35.12 2.27
615 4174 4.324563 CCACATGATGGGTAGAAAGGTCTT 60.325 45.833 0.00 0.00 45.95 3.01
617 4176 3.545703 CCACATGATGGGTAGAAAGGTC 58.454 50.000 0.00 0.00 45.95 3.85
630 4189 4.588951 ACTGATACGGACATACCACATGAT 59.411 41.667 0.00 0.00 38.90 2.45
631 4190 3.958147 ACTGATACGGACATACCACATGA 59.042 43.478 0.00 0.00 38.90 3.07
646 4205 3.180584 GTCGATCGACATGCAACTGATAC 59.819 47.826 36.61 10.36 44.02 2.24
782 4393 1.066143 AGCTGGACATTTGTACGGAGG 60.066 52.381 5.92 0.00 37.44 4.30
826 4437 2.363359 GGAAATTAATGCTGGAGGCTGG 59.637 50.000 0.00 0.00 42.39 4.85
929 4546 1.078848 AAGAAGAAGGATGCGCGCT 60.079 52.632 33.29 17.95 0.00 5.92
998 4619 1.954146 GTGGCGTGACGTGACATGT 60.954 57.895 6.91 0.00 0.00 3.21
1089 4710 0.033601 GGATGGCCATGGTGGTGTTA 60.034 55.000 26.56 0.00 40.46 2.41
1515 5148 3.496131 CCGTGGCCGTGCATGTAC 61.496 66.667 3.51 3.51 0.00 2.90
1672 5305 0.108041 CCGTACCGCCAAATGTACCT 60.108 55.000 0.00 0.00 35.09 3.08
2215 5866 4.079850 CTCGCTGCTGAGGCTGGT 62.080 66.667 11.81 0.00 39.59 4.00
2401 6152 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2403 6154 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2409 6160 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2410 6161 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2412 6163 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2413 6164 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2414 6165 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2415 6166 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2416 6167 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2417 6168 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2418 6169 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2419 6170 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2420 6171 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2421 6172 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2422 6173 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2423 6174 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2424 6175 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2425 6176 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2426 6177 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2427 6178 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2428 6179 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2429 6180 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2430 6181 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2431 6182 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2432 6183 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2433 6184 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2434 6185 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2435 6186 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2436 6187 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2437 6188 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2438 6189 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2439 6190 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2440 6191 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2441 6192 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2442 6193 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2443 6194 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2444 6195 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2445 6196 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2446 6197 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2447 6198 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2448 6199 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2449 6200 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2450 6201 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2451 6202 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2452 6203 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2453 6204 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2454 6205 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2455 6206 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2456 6207 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
2494 6245 4.278419 CGAACCCCAAAGAAATTCAGTTCT 59.722 41.667 0.00 0.00 39.60 3.01
2673 6443 1.352622 ACCTGAAGACCAGTGGGCAA 61.353 55.000 19.84 0.68 41.33 4.52
2735 6505 9.811995 CAGTCAATATTGGTCATTTGATCAAAT 57.188 29.630 24.83 24.83 46.83 2.32
2769 6540 8.282592 GGAAACCTAAATTTTCTCAAAACATGC 58.717 33.333 0.00 0.00 34.06 4.06
2783 6554 6.269077 ACCCGAATTCAAAGGAAACCTAAATT 59.731 34.615 11.95 0.00 36.43 1.82
2784 6555 5.778241 ACCCGAATTCAAAGGAAACCTAAAT 59.222 36.000 11.95 0.00 36.43 1.40
2794 6565 0.243636 GTGGCACCCGAATTCAAAGG 59.756 55.000 6.29 5.49 0.00 3.11
2805 6581 3.056465 TGAAAAATATTTCGGTGGCACCC 60.056 43.478 30.03 13.12 46.47 4.61
2806 6582 4.181309 TGAAAAATATTTCGGTGGCACC 57.819 40.909 26.95 26.95 46.47 5.01
2964 7170 5.279562 TCTTATATTATGGGACGGAGGGA 57.720 43.478 0.00 0.00 0.00 4.20
2965 7171 5.623824 CGTTCTTATATTATGGGACGGAGGG 60.624 48.000 0.00 0.00 0.00 4.30
2966 7172 5.047519 ACGTTCTTATATTATGGGACGGAGG 60.048 44.000 13.18 0.00 0.00 4.30
2967 7173 6.022163 ACGTTCTTATATTATGGGACGGAG 57.978 41.667 13.18 0.00 0.00 4.63
2968 7174 6.409524 AACGTTCTTATATTATGGGACGGA 57.590 37.500 0.00 0.00 0.00 4.69
2969 7175 7.486802 AAAACGTTCTTATATTATGGGACGG 57.513 36.000 0.00 1.76 0.00 4.79
2970 7176 7.853929 CCAAAAACGTTCTTATATTATGGGACG 59.146 37.037 0.00 9.33 0.00 4.79
2971 7177 7.646526 GCCAAAAACGTTCTTATATTATGGGAC 59.353 37.037 0.00 0.00 0.00 4.46
2972 7178 7.339721 TGCCAAAAACGTTCTTATATTATGGGA 59.660 33.333 0.00 1.11 0.00 4.37
2973 7179 7.434013 GTGCCAAAAACGTTCTTATATTATGGG 59.566 37.037 0.00 0.00 0.00 4.00
2974 7180 8.188139 AGTGCCAAAAACGTTCTTATATTATGG 58.812 33.333 0.00 3.63 0.00 2.74
2977 7183 9.439500 ACTAGTGCCAAAAACGTTCTTATATTA 57.561 29.630 0.00 0.00 0.00 0.98
2978 7184 8.234546 CACTAGTGCCAAAAACGTTCTTATATT 58.765 33.333 10.54 0.00 0.00 1.28
2979 7185 7.389607 ACACTAGTGCCAAAAACGTTCTTATAT 59.610 33.333 22.90 0.00 0.00 0.86
2980 7186 6.707161 ACACTAGTGCCAAAAACGTTCTTATA 59.293 34.615 22.90 0.00 0.00 0.98
2981 7187 5.529800 ACACTAGTGCCAAAAACGTTCTTAT 59.470 36.000 22.90 0.00 0.00 1.73
2982 7188 4.877251 ACACTAGTGCCAAAAACGTTCTTA 59.123 37.500 22.90 0.00 0.00 2.10
2983 7189 3.692593 ACACTAGTGCCAAAAACGTTCTT 59.307 39.130 22.90 0.00 0.00 2.52
2984 7190 3.275999 ACACTAGTGCCAAAAACGTTCT 58.724 40.909 22.90 0.00 0.00 3.01
2985 7191 3.685836 ACACTAGTGCCAAAAACGTTC 57.314 42.857 22.90 0.00 0.00 3.95
2986 7192 5.066764 ACATTACACTAGTGCCAAAAACGTT 59.933 36.000 22.90 0.00 0.00 3.99
2987 7193 4.577283 ACATTACACTAGTGCCAAAAACGT 59.423 37.500 22.90 10.41 0.00 3.99
2988 7194 5.103290 ACATTACACTAGTGCCAAAAACG 57.897 39.130 22.90 9.88 0.00 3.60
2989 7195 8.859517 TTTAACATTACACTAGTGCCAAAAAC 57.140 30.769 22.90 0.00 0.00 2.43
2990 7196 9.871238 TTTTTAACATTACACTAGTGCCAAAAA 57.129 25.926 22.90 17.86 0.00 1.94
2991 7197 9.303537 GTTTTTAACATTACACTAGTGCCAAAA 57.696 29.630 22.90 12.09 0.00 2.44
2992 7198 7.644551 CGTTTTTAACATTACACTAGTGCCAAA 59.355 33.333 22.90 14.49 0.00 3.28
2993 7199 7.133513 CGTTTTTAACATTACACTAGTGCCAA 58.866 34.615 22.90 16.62 0.00 4.52
2994 7200 6.260493 ACGTTTTTAACATTACACTAGTGCCA 59.740 34.615 22.90 9.88 0.00 4.92
2995 7201 6.661669 ACGTTTTTAACATTACACTAGTGCC 58.338 36.000 22.90 0.00 0.00 5.01
2996 7202 8.066000 AGAACGTTTTTAACATTACACTAGTGC 58.934 33.333 22.90 0.71 0.00 4.40
2997 7203 9.925268 AAGAACGTTTTTAACATTACACTAGTG 57.075 29.630 21.44 21.44 0.00 2.74
3012 7218 8.852135 TCTGTCCCAAAATATAAGAACGTTTTT 58.148 29.630 9.22 9.22 0.00 1.94
3013 7219 8.398878 TCTGTCCCAAAATATAAGAACGTTTT 57.601 30.769 0.46 0.00 0.00 2.43
3014 7220 7.120726 CCTCTGTCCCAAAATATAAGAACGTTT 59.879 37.037 0.46 0.00 0.00 3.60
3015 7221 6.598064 CCTCTGTCCCAAAATATAAGAACGTT 59.402 38.462 0.00 0.00 0.00 3.99
3016 7222 6.113411 CCTCTGTCCCAAAATATAAGAACGT 58.887 40.000 0.00 0.00 0.00 3.99
3017 7223 5.527582 CCCTCTGTCCCAAAATATAAGAACG 59.472 44.000 0.00 0.00 0.00 3.95
3018 7224 6.659824 TCCCTCTGTCCCAAAATATAAGAAC 58.340 40.000 0.00 0.00 0.00 3.01
3019 7225 6.447084 ACTCCCTCTGTCCCAAAATATAAGAA 59.553 38.462 0.00 0.00 0.00 2.52
3020 7226 5.970640 ACTCCCTCTGTCCCAAAATATAAGA 59.029 40.000 0.00 0.00 0.00 2.10
3021 7227 6.253946 ACTCCCTCTGTCCCAAAATATAAG 57.746 41.667 0.00 0.00 0.00 1.73
3022 7228 6.906901 AGTACTCCCTCTGTCCCAAAATATAA 59.093 38.462 0.00 0.00 0.00 0.98
3023 7229 6.449956 AGTACTCCCTCTGTCCCAAAATATA 58.550 40.000 0.00 0.00 0.00 0.86
3024 7230 5.289510 AGTACTCCCTCTGTCCCAAAATAT 58.710 41.667 0.00 0.00 0.00 1.28
3025 7231 4.695606 AGTACTCCCTCTGTCCCAAAATA 58.304 43.478 0.00 0.00 0.00 1.40
3026 7232 3.532102 AGTACTCCCTCTGTCCCAAAAT 58.468 45.455 0.00 0.00 0.00 1.82
3027 7233 2.986050 AGTACTCCCTCTGTCCCAAAA 58.014 47.619 0.00 0.00 0.00 2.44
3028 7234 2.715763 AGTACTCCCTCTGTCCCAAA 57.284 50.000 0.00 0.00 0.00 3.28
3029 7235 2.715763 AAGTACTCCCTCTGTCCCAA 57.284 50.000 0.00 0.00 0.00 4.12
3030 7236 4.348020 AATAAGTACTCCCTCTGTCCCA 57.652 45.455 0.00 0.00 0.00 4.37
3031 7237 6.803366 TTTAATAAGTACTCCCTCTGTCCC 57.197 41.667 0.00 0.00 0.00 4.46
3032 7238 8.366401 GGTATTTAATAAGTACTCCCTCTGTCC 58.634 40.741 0.00 0.00 0.00 4.02
3033 7239 8.366401 GGGTATTTAATAAGTACTCCCTCTGTC 58.634 40.741 0.00 0.00 0.00 3.51
3034 7240 7.291885 GGGGTATTTAATAAGTACTCCCTCTGT 59.708 40.741 12.12 0.00 33.69 3.41
3035 7241 7.291651 TGGGGTATTTAATAAGTACTCCCTCTG 59.708 40.741 18.24 0.00 38.04 3.35
3036 7242 7.291885 GTGGGGTATTTAATAAGTACTCCCTCT 59.708 40.741 18.24 0.00 38.04 3.69
3037 7243 7.071572 TGTGGGGTATTTAATAAGTACTCCCTC 59.928 40.741 18.24 17.63 38.04 4.30
3038 7244 6.910290 TGTGGGGTATTTAATAAGTACTCCCT 59.090 38.462 18.24 0.00 38.04 4.20
3039 7245 7.140522 TGTGGGGTATTTAATAAGTACTCCC 57.859 40.000 18.24 17.71 38.04 4.30
3040 7246 8.215736 ACATGTGGGGTATTTAATAAGTACTCC 58.784 37.037 15.28 15.28 39.05 3.85
3043 7249 8.996271 GCTACATGTGGGGTATTTAATAAGTAC 58.004 37.037 9.11 0.00 0.00 2.73
3044 7250 8.940982 AGCTACATGTGGGGTATTTAATAAGTA 58.059 33.333 9.11 0.00 0.00 2.24
3045 7251 7.812306 AGCTACATGTGGGGTATTTAATAAGT 58.188 34.615 9.11 0.00 0.00 2.24
3046 7252 8.691661 AAGCTACATGTGGGGTATTTAATAAG 57.308 34.615 9.11 0.00 0.00 1.73
3047 7253 7.442969 CGAAGCTACATGTGGGGTATTTAATAA 59.557 37.037 9.11 0.00 0.00 1.40
3048 7254 6.932400 CGAAGCTACATGTGGGGTATTTAATA 59.068 38.462 9.11 0.00 0.00 0.98
3049 7255 5.763204 CGAAGCTACATGTGGGGTATTTAAT 59.237 40.000 9.11 0.00 0.00 1.40
3050 7256 5.120399 CGAAGCTACATGTGGGGTATTTAA 58.880 41.667 9.11 0.00 0.00 1.52
3134 7341 5.981174 TCGGTTTCAGTTTTCTTATTGTCG 58.019 37.500 0.00 0.00 0.00 4.35
3135 7342 8.623310 TTTTCGGTTTCAGTTTTCTTATTGTC 57.377 30.769 0.00 0.00 0.00 3.18
3301 7510 6.446781 AACATAGTTCCATCAAGATGCAAG 57.553 37.500 4.53 0.00 37.49 4.01
3314 7557 7.349412 AGGTGATACTCACTAACATAGTTCC 57.651 40.000 7.17 0.00 46.19 3.62
3373 7616 5.887214 AAAGTTCTAAAAGTTGGGCCATT 57.113 34.783 7.26 0.05 0.00 3.16
3407 7650 9.778741 GGACCAAAATGTCATCATCTATAACTA 57.221 33.333 0.00 0.00 36.97 2.24
3408 7651 8.497745 AGGACCAAAATGTCATCATCTATAACT 58.502 33.333 0.00 0.00 36.97 2.24
3409 7652 8.682936 AGGACCAAAATGTCATCATCTATAAC 57.317 34.615 0.00 0.00 36.97 1.89
3410 7653 9.778741 GTAGGACCAAAATGTCATCATCTATAA 57.221 33.333 0.00 0.00 36.97 0.98
3411 7654 9.159254 AGTAGGACCAAAATGTCATCATCTATA 57.841 33.333 0.00 0.00 36.97 1.31
3412 7655 7.935755 CAGTAGGACCAAAATGTCATCATCTAT 59.064 37.037 0.00 0.00 36.97 1.98
3413 7656 7.125659 TCAGTAGGACCAAAATGTCATCATCTA 59.874 37.037 0.00 0.00 36.97 1.98
3414 7657 6.070021 TCAGTAGGACCAAAATGTCATCATCT 60.070 38.462 0.00 0.00 36.97 2.90
3415 7658 6.115446 TCAGTAGGACCAAAATGTCATCATC 58.885 40.000 0.00 0.00 36.97 2.92
3416 7659 6.065976 TCAGTAGGACCAAAATGTCATCAT 57.934 37.500 0.00 0.00 36.97 2.45
3417 7660 5.497464 TCAGTAGGACCAAAATGTCATCA 57.503 39.130 0.00 0.00 36.97 3.07
3418 7661 5.297776 CCATCAGTAGGACCAAAATGTCATC 59.702 44.000 0.00 0.00 36.97 2.92
3419 7662 5.195940 CCATCAGTAGGACCAAAATGTCAT 58.804 41.667 0.00 0.00 36.97 3.06
3420 7663 4.588899 CCATCAGTAGGACCAAAATGTCA 58.411 43.478 0.00 0.00 36.97 3.58
3421 7664 3.378427 GCCATCAGTAGGACCAAAATGTC 59.622 47.826 0.00 0.00 34.42 3.06
3422 7665 3.356290 GCCATCAGTAGGACCAAAATGT 58.644 45.455 0.00 0.00 0.00 2.71
3423 7666 2.689983 GGCCATCAGTAGGACCAAAATG 59.310 50.000 0.00 0.00 0.00 2.32
3424 7667 3.018423 GGCCATCAGTAGGACCAAAAT 57.982 47.619 0.00 0.00 0.00 1.82
3425 7668 2.507407 GGCCATCAGTAGGACCAAAA 57.493 50.000 0.00 0.00 0.00 2.44
3430 7673 1.043673 AGTCGGGCCATCAGTAGGAC 61.044 60.000 4.39 0.00 0.00 3.85
3431 7674 0.325296 AAGTCGGGCCATCAGTAGGA 60.325 55.000 4.39 0.00 0.00 2.94
3432 7675 0.541863 AAAGTCGGGCCATCAGTAGG 59.458 55.000 4.39 0.00 0.00 3.18
3433 7676 2.403252 AAAAGTCGGGCCATCAGTAG 57.597 50.000 4.39 0.00 0.00 2.57
3434 7677 3.101437 TCTAAAAGTCGGGCCATCAGTA 58.899 45.455 4.39 0.00 0.00 2.74
3435 7678 1.906574 TCTAAAAGTCGGGCCATCAGT 59.093 47.619 4.39 0.00 0.00 3.41
3436 7679 2.678336 GTTCTAAAAGTCGGGCCATCAG 59.322 50.000 4.39 0.00 0.00 2.90
3437 7680 2.304761 AGTTCTAAAAGTCGGGCCATCA 59.695 45.455 4.39 0.00 0.00 3.07
3438 7681 2.987232 AGTTCTAAAAGTCGGGCCATC 58.013 47.619 4.39 0.00 0.00 3.51
3439 7682 3.434940 AAGTTCTAAAAGTCGGGCCAT 57.565 42.857 4.39 0.00 0.00 4.40
3440 7683 2.943036 AAGTTCTAAAAGTCGGGCCA 57.057 45.000 4.39 0.00 0.00 5.36
3441 7684 5.413523 TGATTAAAGTTCTAAAAGTCGGGCC 59.586 40.000 0.00 0.00 0.00 5.80
3442 7685 6.312487 GTGATTAAAGTTCTAAAAGTCGGGC 58.688 40.000 0.00 0.00 0.00 6.13
3443 7686 6.653740 AGGTGATTAAAGTTCTAAAAGTCGGG 59.346 38.462 0.00 0.00 0.00 5.14
3444 7687 7.668525 AGGTGATTAAAGTTCTAAAAGTCGG 57.331 36.000 0.00 0.00 0.00 4.79
3503 7746 5.637810 TCGATTTGGACAAGTCAAGTGATAC 59.362 40.000 8.05 0.00 0.00 2.24
3596 7848 8.777865 TCAAGATGTAACTCTGACCATTAAAG 57.222 34.615 0.00 0.00 0.00 1.85
3657 7909 2.352805 CAAGCACCCCCTCAGTCC 59.647 66.667 0.00 0.00 0.00 3.85
3681 7935 8.294577 TCATCATATAAATTGCTTCTCATGCAC 58.705 33.333 0.00 0.00 40.40 4.57
3714 7968 6.019640 AGTGAAATCGCACAAGAACAAAAATG 60.020 34.615 0.00 0.00 41.19 2.32
3777 8031 4.375272 CGCAAATGGAGATCATGTAGTCT 58.625 43.478 0.00 0.00 35.99 3.24
4234 8490 2.280628 CCGAACCTGAATGAAGTAGCC 58.719 52.381 0.00 0.00 0.00 3.93
4302 8558 3.991773 ACGATCCTTTCAAATCGAAACGA 59.008 39.130 11.28 0.00 45.83 3.85
4451 8707 4.730042 GTGCACGCAATTCAACATATGTAG 59.270 41.667 9.21 0.00 0.00 2.74
4461 8717 0.314618 AAGCATGTGCACGCAATTCA 59.685 45.000 17.36 0.00 45.16 2.57
4761 9018 3.788434 AACGTGCAGTCATAAGAAACG 57.212 42.857 0.00 0.00 35.78 3.60
4773 9030 3.428870 CCAGAGTAGTGTTAAACGTGCAG 59.571 47.826 0.00 0.00 0.00 4.41
4813 9089 4.141711 ACTGTAACAGCAAAGAAGGAGACA 60.142 41.667 0.00 0.00 34.37 3.41
4984 9265 8.966868 TGATTTACCTTTTCTAAAATGCCTAGG 58.033 33.333 3.67 3.67 0.00 3.02
5052 9333 0.517316 GCACCGCTTAGTTGTTCAGG 59.483 55.000 0.00 0.00 0.00 3.86
5067 9348 3.215975 TGGTAGTTGGTTTGTAAGCACC 58.784 45.455 0.00 0.00 38.84 5.01
5099 9382 5.075858 AGATTCTTCAGCTGAGAGAAGTG 57.924 43.478 28.71 13.80 41.46 3.16
5142 9425 1.806542 TCGCTTTCCTGCAAAGATCAC 59.193 47.619 0.71 0.00 44.02 3.06
5239 9528 1.298667 CCGAAATTCTCCCGTGGGT 59.701 57.895 4.53 0.00 36.47 4.51
5428 9717 1.071605 GAAGTGATCACTGCACGTCC 58.928 55.000 28.52 8.67 41.58 4.79
5496 9785 2.159558 TCGATCTCGGACAGAAAGAACG 60.160 50.000 0.00 0.00 40.29 3.95
5509 9798 3.094058 GTCGCGCCATCGATCTCG 61.094 66.667 0.00 10.48 40.84 4.04
5522 9811 2.412847 CCAGAGAACCAAAATTCGTCGC 60.413 50.000 0.00 0.00 33.57 5.19
5605 9895 2.414559 GCGCGTTACACACTAGACCTAA 60.415 50.000 8.43 0.00 0.00 2.69
5704 9998 3.219198 GGTTCGGGGCCATGATGC 61.219 66.667 4.39 0.00 0.00 3.91
5714 10008 0.036164 TCAACATGGACTGGTTCGGG 59.964 55.000 0.00 0.00 0.00 5.14
5716 10010 2.009774 GGATCAACATGGACTGGTTCG 58.990 52.381 0.00 0.00 0.00 3.95
5769 10063 6.088085 GCTGAAACCAACTGACGATTAATTTG 59.912 38.462 0.00 0.00 0.00 2.32
5831 10133 3.518998 GACGAGCAGCGCCTCCTA 61.519 66.667 2.29 0.00 46.04 2.94
5895 10197 0.106708 TGCATCTTCCGGTGGCTATC 59.893 55.000 0.00 0.00 0.00 2.08
5896 10198 0.107456 CTGCATCTTCCGGTGGCTAT 59.893 55.000 0.00 0.00 0.00 2.97
5897 10199 1.522092 CTGCATCTTCCGGTGGCTA 59.478 57.895 0.00 0.00 0.00 3.93
5915 10217 3.730761 CACTGCTTCCACCAGCGC 61.731 66.667 0.00 0.00 43.37 5.92
5964 10266 4.452733 GGACTTCGAGGGTGGCGG 62.453 72.222 0.00 0.00 0.00 6.13
5975 10277 1.079750 GGTGTGCCTCGAGGACTTC 60.080 63.158 35.69 21.89 37.39 3.01
5999 10301 1.454111 CGAGATGAGGGAGGACGGT 60.454 63.158 0.00 0.00 0.00 4.83
6039 10341 1.593750 CAGACGAGGCCATAGCTGC 60.594 63.158 5.01 0.00 39.73 5.25
6198 10500 2.125269 AGTGCCCGAATACGTGCC 60.125 61.111 0.00 0.00 41.75 5.01
6281 10583 2.057503 AATTCTCGCATCGATCCTCG 57.942 50.000 0.00 0.00 42.10 4.63
6329 10631 2.086869 GGCATTTCAGCTCAACTGCTA 58.913 47.619 12.21 0.00 46.76 3.49
6361 10663 1.309499 ACGCTTACTCGCTCTGCTCT 61.309 55.000 0.00 0.00 0.00 4.09
6365 10667 0.109735 TGTGACGCTTACTCGCTCTG 60.110 55.000 0.00 0.00 0.00 3.35
6380 10682 3.608662 GTCCCCGTGTCCGTGTGA 61.609 66.667 0.00 0.00 0.00 3.58
6419 10721 1.945387 ATCAAGATGATCAGCGCGTT 58.055 45.000 8.43 0.00 29.59 4.84
6437 10739 6.655078 ACACTGCCAAATTTAGAGACAAAT 57.345 33.333 0.00 0.00 0.00 2.32
6443 10745 6.073222 ACGAACTAACACTGCCAAATTTAGAG 60.073 38.462 0.00 0.00 0.00 2.43
6500 10802 6.599638 ACCTCGATAATTTTCTTTCAAGAGGG 59.400 38.462 14.82 0.00 44.06 4.30
6518 10820 6.207025 GTGACTACCAGTGATATTACCTCGAT 59.793 42.308 0.00 0.00 0.00 3.59
6519 10821 5.530171 GTGACTACCAGTGATATTACCTCGA 59.470 44.000 0.00 0.00 0.00 4.04
6520 10822 5.531659 AGTGACTACCAGTGATATTACCTCG 59.468 44.000 0.00 0.00 0.00 4.63
6521 10823 6.963083 AGTGACTACCAGTGATATTACCTC 57.037 41.667 0.00 0.00 0.00 3.85
6522 10824 8.834004 TTTAGTGACTACCAGTGATATTACCT 57.166 34.615 0.00 0.00 0.00 3.08
6526 10828 9.959721 ACAAATTTAGTGACTACCAGTGATATT 57.040 29.630 0.00 0.00 0.00 1.28
6527 10829 9.383519 CACAAATTTAGTGACTACCAGTGATAT 57.616 33.333 12.60 0.00 39.30 1.63
6528 10830 8.372459 ACACAAATTTAGTGACTACCAGTGATA 58.628 33.333 20.41 0.00 40.16 2.15
6529 10831 7.224297 ACACAAATTTAGTGACTACCAGTGAT 58.776 34.615 20.41 0.00 40.16 3.06
6530 10832 6.588204 ACACAAATTTAGTGACTACCAGTGA 58.412 36.000 20.41 0.00 40.16 3.41
6531 10833 6.346598 CGACACAAATTTAGTGACTACCAGTG 60.347 42.308 20.41 10.14 40.16 3.66
6532 10834 5.694910 CGACACAAATTTAGTGACTACCAGT 59.305 40.000 20.41 3.33 40.16 4.00
6533 10835 5.924254 TCGACACAAATTTAGTGACTACCAG 59.076 40.000 20.41 7.62 40.16 4.00
6534 10836 5.845103 TCGACACAAATTTAGTGACTACCA 58.155 37.500 20.41 0.00 40.16 3.25
6535 10837 6.774354 TTCGACACAAATTTAGTGACTACC 57.226 37.500 20.41 8.44 40.16 3.18
6536 10838 7.740346 CACATTCGACACAAATTTAGTGACTAC 59.260 37.037 20.41 11.31 40.16 2.73
6537 10839 7.570507 GCACATTCGACACAAATTTAGTGACTA 60.571 37.037 20.41 9.20 40.16 2.59
6538 10840 6.658831 CACATTCGACACAAATTTAGTGACT 58.341 36.000 20.41 0.00 40.16 3.41
6539 10841 5.339611 GCACATTCGACACAAATTTAGTGAC 59.660 40.000 20.41 15.38 40.16 3.67
6540 10842 5.008118 TGCACATTCGACACAAATTTAGTGA 59.992 36.000 20.41 8.41 40.16 3.41
6541 10843 5.211454 TGCACATTCGACACAAATTTAGTG 58.789 37.500 15.01 15.01 42.56 2.74
6542 10844 5.008613 ACTGCACATTCGACACAAATTTAGT 59.991 36.000 0.00 0.00 0.00 2.24
6543 10845 5.451908 ACTGCACATTCGACACAAATTTAG 58.548 37.500 0.00 0.00 0.00 1.85
6544 10846 5.431420 ACTGCACATTCGACACAAATTTA 57.569 34.783 0.00 0.00 0.00 1.40
6545 10847 4.305989 ACTGCACATTCGACACAAATTT 57.694 36.364 0.00 0.00 0.00 1.82
6546 10848 3.988379 ACTGCACATTCGACACAAATT 57.012 38.095 0.00 0.00 0.00 1.82
6547 10849 3.988379 AACTGCACATTCGACACAAAT 57.012 38.095 0.00 0.00 0.00 2.32
6548 10850 3.773860 AAACTGCACATTCGACACAAA 57.226 38.095 0.00 0.00 0.00 2.83
6549 10851 3.119673 ACAAAACTGCACATTCGACACAA 60.120 39.130 0.00 0.00 0.00 3.33
6550 10852 2.421775 ACAAAACTGCACATTCGACACA 59.578 40.909 0.00 0.00 0.00 3.72
6551 10853 2.783284 CACAAAACTGCACATTCGACAC 59.217 45.455 0.00 0.00 0.00 3.67
6552 10854 2.794282 GCACAAAACTGCACATTCGACA 60.794 45.455 0.00 0.00 37.11 4.35
6553 10855 1.780860 GCACAAAACTGCACATTCGAC 59.219 47.619 0.00 0.00 37.11 4.20
6554 10856 1.675483 AGCACAAAACTGCACATTCGA 59.325 42.857 0.00 0.00 39.86 3.71
6555 10857 2.124011 AGCACAAAACTGCACATTCG 57.876 45.000 0.00 0.00 39.86 3.34
6556 10858 4.488126 TCTAGCACAAAACTGCACATTC 57.512 40.909 0.00 0.00 39.86 2.67
6557 10859 4.763793 AGATCTAGCACAAAACTGCACATT 59.236 37.500 0.00 0.00 39.86 2.71
6558 10860 4.330250 AGATCTAGCACAAAACTGCACAT 58.670 39.130 0.00 0.00 39.86 3.21
6559 10861 3.743521 AGATCTAGCACAAAACTGCACA 58.256 40.909 0.00 0.00 39.86 4.57
6560 10862 4.756084 AAGATCTAGCACAAAACTGCAC 57.244 40.909 0.00 0.00 39.86 4.57
6561 10863 4.821260 TCAAAGATCTAGCACAAAACTGCA 59.179 37.500 0.00 0.00 39.86 4.41
6562 10864 5.362556 TCAAAGATCTAGCACAAAACTGC 57.637 39.130 0.00 0.00 37.44 4.40
6565 10867 9.638300 CGTATTATCAAAGATCTAGCACAAAAC 57.362 33.333 0.00 0.00 0.00 2.43
6566 10868 9.378551 ACGTATTATCAAAGATCTAGCACAAAA 57.621 29.630 0.00 0.00 0.00 2.44
6567 10869 8.942338 ACGTATTATCAAAGATCTAGCACAAA 57.058 30.769 0.00 0.00 0.00 2.83
6568 10870 8.942338 AACGTATTATCAAAGATCTAGCACAA 57.058 30.769 0.00 0.00 0.00 3.33
6569 10871 8.942338 AAACGTATTATCAAAGATCTAGCACA 57.058 30.769 0.00 0.00 0.00 4.57
6593 10895 9.239002 CAAATAACAAGTTGTATGACCGAAAAA 57.761 29.630 9.37 0.00 0.00 1.94
6594 10896 7.863375 CCAAATAACAAGTTGTATGACCGAAAA 59.137 33.333 9.37 0.00 0.00 2.29
6595 10897 7.013464 ACCAAATAACAAGTTGTATGACCGAAA 59.987 33.333 9.37 0.00 0.00 3.46
6596 10898 6.487331 ACCAAATAACAAGTTGTATGACCGAA 59.513 34.615 9.37 0.00 0.00 4.30
6597 10899 5.998981 ACCAAATAACAAGTTGTATGACCGA 59.001 36.000 9.37 0.00 0.00 4.69
6598 10900 6.249035 ACCAAATAACAAGTTGTATGACCG 57.751 37.500 9.37 0.00 0.00 4.79
6599 10901 7.653647 TGAACCAAATAACAAGTTGTATGACC 58.346 34.615 9.37 1.28 0.00 4.02
6600 10902 9.522804 TTTGAACCAAATAACAAGTTGTATGAC 57.477 29.630 9.37 3.49 0.00 3.06
6604 10906 9.666626 CGTATTTGAACCAAATAACAAGTTGTA 57.333 29.630 9.37 0.00 44.45 2.41
6605 10907 7.650104 CCGTATTTGAACCAAATAACAAGTTGT 59.350 33.333 1.64 1.64 44.45 3.32
6606 10908 7.650104 ACCGTATTTGAACCAAATAACAAGTTG 59.350 33.333 12.13 0.00 44.45 3.16
6607 10909 7.718525 ACCGTATTTGAACCAAATAACAAGTT 58.281 30.769 12.13 0.00 44.45 2.66
6608 10910 7.013464 TGACCGTATTTGAACCAAATAACAAGT 59.987 33.333 12.13 8.32 44.45 3.16
6609 10911 7.325097 GTGACCGTATTTGAACCAAATAACAAG 59.675 37.037 12.13 6.00 44.45 3.16
6610 10912 7.013464 AGTGACCGTATTTGAACCAAATAACAA 59.987 33.333 12.13 0.00 44.45 2.83
6611 10913 6.487331 AGTGACCGTATTTGAACCAAATAACA 59.513 34.615 12.13 8.63 44.45 2.41
6612 10914 6.905578 AGTGACCGTATTTGAACCAAATAAC 58.094 36.000 12.13 7.87 44.45 1.89
6613 10915 6.938030 AGAGTGACCGTATTTGAACCAAATAA 59.062 34.615 12.13 0.00 44.45 1.40
6614 10916 6.370442 CAGAGTGACCGTATTTGAACCAAATA 59.630 38.462 7.75 7.75 41.50 1.40
6615 10917 5.181245 CAGAGTGACCGTATTTGAACCAAAT 59.819 40.000 9.49 9.49 44.74 2.32
6616 10918 4.513692 CAGAGTGACCGTATTTGAACCAAA 59.486 41.667 0.00 0.00 37.75 3.28
6617 10919 4.062293 CAGAGTGACCGTATTTGAACCAA 58.938 43.478 0.00 0.00 0.00 3.67
6618 10920 3.070446 ACAGAGTGACCGTATTTGAACCA 59.930 43.478 0.00 0.00 0.00 3.67
6619 10921 3.660865 ACAGAGTGACCGTATTTGAACC 58.339 45.455 0.00 0.00 0.00 3.62
6620 10922 4.989168 AGAACAGAGTGACCGTATTTGAAC 59.011 41.667 0.00 0.00 0.00 3.18
6621 10923 5.209818 AGAACAGAGTGACCGTATTTGAA 57.790 39.130 0.00 0.00 0.00 2.69
6622 10924 4.866508 AGAACAGAGTGACCGTATTTGA 57.133 40.909 0.00 0.00 0.00 2.69
6623 10925 4.563184 GCTAGAACAGAGTGACCGTATTTG 59.437 45.833 0.00 0.00 0.00 2.32
6624 10926 4.674623 CGCTAGAACAGAGTGACCGTATTT 60.675 45.833 0.00 0.00 0.00 1.40
6625 10927 3.181499 CGCTAGAACAGAGTGACCGTATT 60.181 47.826 0.00 0.00 0.00 1.89
6626 10928 2.355132 CGCTAGAACAGAGTGACCGTAT 59.645 50.000 0.00 0.00 0.00 3.06
6627 10929 1.736126 CGCTAGAACAGAGTGACCGTA 59.264 52.381 0.00 0.00 0.00 4.02
6628 10930 0.522180 CGCTAGAACAGAGTGACCGT 59.478 55.000 0.00 0.00 0.00 4.83
6629 10931 0.798771 GCGCTAGAACAGAGTGACCG 60.799 60.000 0.00 0.00 0.00 4.79
6630 10932 0.243907 TGCGCTAGAACAGAGTGACC 59.756 55.000 9.73 0.00 0.00 4.02
6631 10933 1.923204 CATGCGCTAGAACAGAGTGAC 59.077 52.381 9.73 0.00 0.00 3.67
6632 10934 1.737029 GCATGCGCTAGAACAGAGTGA 60.737 52.381 9.73 0.00 34.30 3.41
6633 10935 0.649475 GCATGCGCTAGAACAGAGTG 59.351 55.000 9.73 0.00 34.30 3.51
6634 10936 0.803768 CGCATGCGCTAGAACAGAGT 60.804 55.000 29.09 0.00 35.30 3.24
6635 10937 0.803768 ACGCATGCGCTAGAACAGAG 60.804 55.000 38.15 9.62 44.19 3.35
6636 10938 0.454196 TACGCATGCGCTAGAACAGA 59.546 50.000 38.15 10.64 44.19 3.41
6637 10939 1.491670 ATACGCATGCGCTAGAACAG 58.508 50.000 38.15 10.95 44.19 3.16
6638 10940 1.858458 GAATACGCATGCGCTAGAACA 59.142 47.619 38.15 15.64 44.19 3.18
6639 10941 1.136884 CGAATACGCATGCGCTAGAAC 60.137 52.381 38.15 22.46 44.19 3.01
6640 10942 1.128513 CGAATACGCATGCGCTAGAA 58.871 50.000 38.15 19.47 44.19 2.10
6641 10943 0.663269 CCGAATACGCATGCGCTAGA 60.663 55.000 38.15 21.87 44.19 2.43
6642 10944 1.775344 CCGAATACGCATGCGCTAG 59.225 57.895 38.15 23.71 44.19 3.42
6643 10945 2.307309 GCCGAATACGCATGCGCTA 61.307 57.895 38.15 27.53 44.19 4.26
6644 10946 3.640000 GCCGAATACGCATGCGCT 61.640 61.111 38.15 26.38 44.19 5.92
6645 10947 3.240606 ATGCCGAATACGCATGCGC 62.241 57.895 38.15 21.45 44.19 6.09
6646 10948 1.439201 CATGCCGAATACGCATGCG 60.439 57.895 36.79 36.79 42.08 4.73
6647 10949 0.865111 TACATGCCGAATACGCATGC 59.135 50.000 19.69 7.91 46.62 4.06
6649 10951 2.076100 CCATACATGCCGAATACGCAT 58.924 47.619 0.00 0.00 36.99 4.73
6650 10952 1.507562 CCATACATGCCGAATACGCA 58.492 50.000 0.00 0.00 38.29 5.24
6651 10953 0.796312 CCCATACATGCCGAATACGC 59.204 55.000 0.00 0.00 38.29 4.42
6652 10954 2.066262 GACCCATACATGCCGAATACG 58.934 52.381 0.00 0.00 39.43 3.06
6653 10955 2.224426 TGGACCCATACATGCCGAATAC 60.224 50.000 0.00 0.00 0.00 1.89
6654 10956 2.050918 TGGACCCATACATGCCGAATA 58.949 47.619 0.00 0.00 0.00 1.75
6655 10957 0.843309 TGGACCCATACATGCCGAAT 59.157 50.000 0.00 0.00 0.00 3.34
6656 10958 0.107410 GTGGACCCATACATGCCGAA 60.107 55.000 0.00 0.00 0.00 4.30
6657 10959 0.980754 AGTGGACCCATACATGCCGA 60.981 55.000 0.00 0.00 0.00 5.54
6658 10960 0.815213 CAGTGGACCCATACATGCCG 60.815 60.000 0.00 0.00 0.00 5.69
6659 10961 0.255890 ACAGTGGACCCATACATGCC 59.744 55.000 0.00 0.00 0.00 4.40
6660 10962 1.065491 TGACAGTGGACCCATACATGC 60.065 52.381 0.00 0.00 0.00 4.06
6661 10963 2.910199 CTGACAGTGGACCCATACATG 58.090 52.381 0.00 0.00 0.00 3.21
6662 10964 1.210478 GCTGACAGTGGACCCATACAT 59.790 52.381 3.99 0.00 0.00 2.29
6663 10965 0.613260 GCTGACAGTGGACCCATACA 59.387 55.000 3.99 0.00 0.00 2.29
6664 10966 0.460284 CGCTGACAGTGGACCCATAC 60.460 60.000 8.20 0.00 0.00 2.39
6665 10967 0.613572 TCGCTGACAGTGGACCCATA 60.614 55.000 15.79 0.00 0.00 2.74
6666 10968 1.892819 CTCGCTGACAGTGGACCCAT 61.893 60.000 15.79 0.00 0.00 4.00
6667 10969 2.523168 TCGCTGACAGTGGACCCA 60.523 61.111 15.79 0.00 0.00 4.51
6668 10970 2.262915 CTCGCTGACAGTGGACCC 59.737 66.667 15.79 0.00 0.00 4.46
6669 10971 2.433318 GCTCGCTGACAGTGGACC 60.433 66.667 15.79 1.56 0.00 4.46
6670 10972 1.735920 CAGCTCGCTGACAGTGGAC 60.736 63.158 15.79 8.38 46.30 4.02
6671 10973 2.653115 CAGCTCGCTGACAGTGGA 59.347 61.111 15.79 7.11 46.30 4.02
6672 10974 3.117171 GCAGCTCGCTGACAGTGG 61.117 66.667 22.09 7.95 46.30 4.00
6673 10975 2.356673 TGCAGCTCGCTGACAGTG 60.357 61.111 22.09 9.85 46.30 3.66
6674 10976 2.356793 GTGCAGCTCGCTGACAGT 60.357 61.111 22.09 0.00 46.30 3.55
6675 10977 2.048409 AGTGCAGCTCGCTGACAG 60.048 61.111 22.09 0.00 46.30 3.51
6680 10982 1.226686 CTGAAACAGTGCAGCTCGCT 61.227 55.000 9.12 2.28 43.06 4.93
6681 10983 1.206072 CTGAAACAGTGCAGCTCGC 59.794 57.895 0.00 1.70 42.89 5.03
6682 10984 0.788995 CTCTGAAACAGTGCAGCTCG 59.211 55.000 0.00 0.00 32.61 5.03
6683 10985 0.516439 GCTCTGAAACAGTGCAGCTC 59.484 55.000 17.02 0.00 46.22 4.09
6684 10986 1.226686 CGCTCTGAAACAGTGCAGCT 61.227 55.000 20.16 0.00 46.98 4.24
6685 10987 1.206072 CGCTCTGAAACAGTGCAGC 59.794 57.895 20.16 11.67 46.98 5.25
6686 10988 0.510359 GTCGCTCTGAAACAGTGCAG 59.490 55.000 20.16 14.46 46.98 4.41
6687 10989 0.179086 TGTCGCTCTGAAACAGTGCA 60.179 50.000 20.16 9.06 46.98 4.57
6688 10990 0.233332 GTGTCGCTCTGAAACAGTGC 59.767 55.000 13.44 13.44 44.36 4.40
6689 10991 0.504384 CGTGTCGCTCTGAAACAGTG 59.496 55.000 0.00 0.00 34.14 3.66
6690 10992 0.102481 ACGTGTCGCTCTGAAACAGT 59.898 50.000 0.00 0.00 34.14 3.55
6691 10993 0.504384 CACGTGTCGCTCTGAAACAG 59.496 55.000 7.58 0.00 34.14 3.16
6692 10994 0.101579 TCACGTGTCGCTCTGAAACA 59.898 50.000 16.51 0.00 34.14 2.83
6693 10995 0.778815 CTCACGTGTCGCTCTGAAAC 59.221 55.000 16.51 0.00 0.00 2.78
6694 10996 0.939577 GCTCACGTGTCGCTCTGAAA 60.940 55.000 16.51 0.00 0.00 2.69
6695 10997 1.371758 GCTCACGTGTCGCTCTGAA 60.372 57.895 16.51 0.00 0.00 3.02
6696 10998 2.255554 GCTCACGTGTCGCTCTGA 59.744 61.111 16.51 0.00 0.00 3.27
6697 10999 3.168604 CGCTCACGTGTCGCTCTG 61.169 66.667 22.89 9.89 33.53 3.35
6698 11000 3.354645 TCGCTCACGTGTCGCTCT 61.355 61.111 22.89 0.00 41.18 4.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.