Multiple sequence alignment - TraesCS4D01G127600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G127600 chr4D 100.000 4022 0 0 1440 5461 111949936 111945915 0.000000e+00 7428.0
1 TraesCS4D01G127600 chr4D 100.000 1184 0 0 1 1184 111951375 111950192 0.000000e+00 2187.0
2 TraesCS4D01G127600 chr4D 83.412 211 29 6 3522 3730 278186681 278186475 2.010000e-44 191.0
3 TraesCS4D01G127600 chr4D 93.600 125 8 0 1055 1179 111949936 111949812 2.600000e-43 187.0
4 TraesCS4D01G127600 chr4D 93.600 125 8 0 1440 1564 111950321 111950197 2.600000e-43 187.0
5 TraesCS4D01G127600 chr4D 85.714 133 10 5 672 801 117421298 117421172 1.230000e-26 132.0
6 TraesCS4D01G127600 chr4D 84.559 136 13 5 672 804 386984775 386984645 1.600000e-25 128.0
7 TraesCS4D01G127600 chr4D 79.310 145 28 2 5297 5439 92077868 92077724 3.480000e-17 100.0
8 TraesCS4D01G127600 chr4D 74.539 271 47 13 5212 5461 19336648 19336379 1.250000e-16 99.0
9 TraesCS4D01G127600 chr4B 92.855 3303 145 33 1440 4700 172523906 172520653 0.000000e+00 4708.0
10 TraesCS4D01G127600 chr4B 91.607 417 11 11 788 1180 172524326 172523910 6.180000e-154 555.0
11 TraesCS4D01G127600 chr4B 92.701 137 10 0 1440 1576 172524035 172523899 1.200000e-46 198.0
12 TraesCS4D01G127600 chr4B 77.581 339 62 11 5065 5393 87431233 87431567 5.580000e-45 193.0
13 TraesCS4D01G127600 chr4B 86.290 124 10 5 672 793 7037066 7036948 1.600000e-25 128.0
14 TraesCS4D01G127600 chr4B 82.993 147 11 11 672 809 601790310 601790169 2.670000e-23 121.0
15 TraesCS4D01G127600 chr4A 94.069 1214 46 10 2707 3911 465328676 465329872 0.000000e+00 1820.0
16 TraesCS4D01G127600 chr4A 94.925 867 33 3 1440 2303 465327172 465328030 0.000000e+00 1347.0
17 TraesCS4D01G127600 chr4A 96.333 409 12 2 2303 2710 465328088 465328494 0.000000e+00 669.0
18 TraesCS4D01G127600 chr4A 90.073 413 16 12 787 1180 465326765 465327171 3.770000e-141 512.0
19 TraesCS4D01G127600 chr4A 83.903 497 56 11 4972 5459 465330592 465331073 2.320000e-123 453.0
20 TraesCS4D01G127600 chr4A 92.138 318 19 5 4192 4506 465329865 465330179 1.400000e-120 444.0
21 TraesCS4D01G127600 chr4A 86.872 358 13 8 4491 4831 465330193 465330533 2.400000e-98 370.0
22 TraesCS4D01G127600 chr4A 81.301 369 63 5 2900 3265 669572199 669572564 1.490000e-75 294.0
23 TraesCS4D01G127600 chr4A 86.641 262 26 6 415 673 465326198 465326453 1.160000e-71 281.0
24 TraesCS4D01G127600 chr4A 93.865 163 9 1 149 310 465326027 465326189 1.520000e-60 244.0
25 TraesCS4D01G127600 chr4A 95.973 149 5 1 1 148 661354922 661354774 1.970000e-59 241.0
26 TraesCS4D01G127600 chr4A 91.241 137 9 1 1440 1576 465327046 465327179 3.360000e-42 183.0
27 TraesCS4D01G127600 chr5D 86.562 320 28 11 1574 1891 228773968 228774274 6.780000e-89 339.0
28 TraesCS4D01G127600 chr5D 82.058 379 37 21 3370 3730 228775719 228776084 1.490000e-75 294.0
29 TraesCS4D01G127600 chr5D 79.885 348 61 9 2862 3206 56929217 56929558 4.220000e-61 246.0
30 TraesCS4D01G127600 chr5D 95.973 149 5 1 1 148 432762807 432762955 1.970000e-59 241.0
31 TraesCS4D01G127600 chr5B 86.562 320 28 11 1574 1891 254570090 254570396 6.780000e-89 339.0
32 TraesCS4D01G127600 chr5B 82.493 377 37 19 3370 3730 254571908 254572271 2.470000e-78 303.0
33 TraesCS4D01G127600 chr5B 80.912 351 52 15 2862 3206 59907827 59908168 4.200000e-66 263.0
34 TraesCS4D01G127600 chr5A 86.250 320 29 11 1574 1891 307346682 307346988 3.150000e-87 333.0
35 TraesCS4D01G127600 chr5A 82.322 379 36 21 3370 3730 307348327 307348692 3.200000e-77 300.0
36 TraesCS4D01G127600 chr5A 79.177 413 75 11 5045 5451 1899803 1900210 5.390000e-70 276.0
37 TraesCS4D01G127600 chr5A 78.846 364 74 3 5043 5403 311278408 311278771 5.470000e-60 243.0
38 TraesCS4D01G127600 chr5A 87.395 119 7 5 672 787 558675551 558675664 4.440000e-26 130.0
39 TraesCS4D01G127600 chr6D 79.343 426 78 10 5041 5461 390160849 390160429 1.920000e-74 291.0
40 TraesCS4D01G127600 chr6D 79.058 382 69 9 2883 3256 309727201 309726823 9.080000e-63 252.0
41 TraesCS4D01G127600 chr6D 96.000 150 4 2 1 148 54228854 54229003 5.470000e-60 243.0
42 TraesCS4D01G127600 chr6D 95.973 149 5 1 1 148 20630692 20630840 1.970000e-59 241.0
43 TraesCS4D01G127600 chr6D 86.567 134 9 7 672 801 433642650 433642522 7.380000e-29 139.0
44 TraesCS4D01G127600 chr6D 75.465 269 54 8 5153 5409 422193998 422194266 2.670000e-23 121.0
45 TraesCS4D01G127600 chr6D 81.250 128 21 3 5273 5398 161915596 161915470 3.480000e-17 100.0
46 TraesCS4D01G127600 chr6D 76.692 133 26 4 5332 5461 457522377 457522247 9.820000e-08 69.4
47 TraesCS4D01G127600 chr6B 81.616 359 59 6 2900 3255 226359054 226359408 1.920000e-74 291.0
48 TraesCS4D01G127600 chr6B 77.612 268 50 10 5189 5450 159706974 159706711 2.630000e-33 154.0
49 TraesCS4D01G127600 chr7D 97.973 148 2 1 2 148 224076517 224076370 7.020000e-64 255.0
50 TraesCS4D01G127600 chr7D 95.973 149 5 1 1 148 440267648 440267500 1.970000e-59 241.0
51 TraesCS4D01G127600 chr7D 76.884 398 81 8 2869 3265 516986954 516986567 1.190000e-51 215.0
52 TraesCS4D01G127600 chr7D 73.860 329 75 10 5073 5397 100989227 100989548 2.670000e-23 121.0
53 TraesCS4D01G127600 chr2D 78.626 393 78 6 5073 5461 520511341 520511731 7.020000e-64 255.0
54 TraesCS4D01G127600 chr2D 75.516 339 62 16 5076 5397 108456223 108455889 4.410000e-31 147.0
55 TraesCS4D01G127600 chr2D 81.818 132 16 7 5309 5440 117121888 117121765 2.690000e-18 104.0
56 TraesCS4D01G127600 chr3D 96.644 149 4 1 1 148 10727233 10727085 4.220000e-61 246.0
57 TraesCS4D01G127600 chr3D 90.116 172 15 2 3326 3497 293809877 293810046 7.120000e-54 222.0
58 TraesCS4D01G127600 chr7A 96.000 150 5 1 1 149 496927275 496927126 5.470000e-60 243.0
59 TraesCS4D01G127600 chr7A 73.449 403 84 18 5076 5461 571740434 571740038 4.440000e-26 130.0
60 TraesCS4D01G127600 chr3B 84.291 261 26 6 3319 3565 387432388 387432647 1.970000e-59 241.0
61 TraesCS4D01G127600 chr3B 93.750 160 7 3 1 159 702886178 702886021 2.540000e-58 237.0
62 TraesCS4D01G127600 chr3B 80.383 209 29 3 3522 3730 345089238 345089434 1.230000e-31 148.0
63 TraesCS4D01G127600 chr3B 75.081 309 61 10 5166 5461 5602013 5602318 4.440000e-26 130.0
64 TraesCS4D01G127600 chr1D 78.630 365 69 9 2929 3288 423056177 423056537 3.290000e-57 233.0
65 TraesCS4D01G127600 chr1D 88.136 118 7 5 672 787 415400189 415400077 3.430000e-27 134.0
66 TraesCS4D01G127600 chr1D 83.654 104 15 2 5337 5438 460869503 460869400 4.500000e-16 97.1
67 TraesCS4D01G127600 chr1B 87.500 168 20 1 3330 3497 319135098 319134932 5.580000e-45 193.0
68 TraesCS4D01G127600 chr1B 76.771 353 76 6 2937 3288 572308148 572308495 5.580000e-45 193.0
69 TraesCS4D01G127600 chr1B 94.505 91 4 1 3404 3493 425719482 425719392 7.380000e-29 139.0
70 TraesCS4D01G127600 chr1B 88.235 119 8 5 672 788 666933646 666933532 2.650000e-28 137.0
71 TraesCS4D01G127600 chr2B 79.152 283 50 9 5128 5405 72827190 72827468 2.600000e-43 187.0
72 TraesCS4D01G127600 chr2B 79.904 209 30 3 3522 3730 70869365 70869561 5.700000e-30 143.0
73 TraesCS4D01G127600 chr2B 79.570 186 26 3 3522 3707 72605211 72605038 7.430000e-24 122.0
74 TraesCS4D01G127600 chr1A 78.929 280 40 15 2875 3147 59130472 59130739 7.270000e-39 172.0
75 TraesCS4D01G127600 chr3A 79.184 245 49 2 5148 5390 724831255 724831499 9.410000e-38 169.0
76 TraesCS4D01G127600 chr3A 85.271 129 17 2 5270 5397 58830757 58830884 1.230000e-26 132.0
77 TraesCS4D01G127600 chr7B 79.500 200 33 6 5235 5430 237501816 237502011 9.540000e-28 135.0
78 TraesCS4D01G127600 chr7B 86.400 125 9 6 671 793 626602397 626602515 4.440000e-26 130.0
79 TraesCS4D01G127600 chr2A 78.409 176 23 11 5144 5311 623106115 623105947 3.480000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G127600 chr4D 111945915 111951375 5460 True 2497.250000 7428 96.800000 1 5461 4 chr4D.!!$R6 5460
1 TraesCS4D01G127600 chr4B 172520653 172524326 3673 True 1820.333333 4708 92.387667 788 4700 3 chr4B.!!$R3 3912
2 TraesCS4D01G127600 chr4A 465326027 465331073 5046 False 632.300000 1820 91.006000 149 5459 10 chr4A.!!$F2 5310
3 TraesCS4D01G127600 chr5D 228773968 228776084 2116 False 316.500000 339 84.310000 1574 3730 2 chr5D.!!$F3 2156
4 TraesCS4D01G127600 chr5B 254570090 254572271 2181 False 321.000000 339 84.527500 1574 3730 2 chr5B.!!$F2 2156
5 TraesCS4D01G127600 chr5A 307346682 307348692 2010 False 316.500000 333 84.286000 1574 3730 2 chr5A.!!$F4 2156

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
434 435 0.032217 TTGATCTGAATTGGGGCCCC 60.032 55.000 36.14 36.14 0.00 5.80 F
670 672 0.035725 TCTGCTTGCCTCCAGATGTG 60.036 55.000 0.00 0.00 33.44 3.21 F
675 677 0.249120 TTGCCTCCAGATGTGTACGG 59.751 55.000 0.00 0.00 0.00 4.02 F
992 1228 0.329596 ACAGCTCCAATCCCCAAGTC 59.670 55.000 0.00 0.00 0.00 3.01 F
2196 2475 0.450184 GAGGAAGGCGCGCAATTTTA 59.550 50.000 34.42 0.00 0.00 1.52 F
2392 2729 1.031235 TGCCACTGGTGATTGTTGTG 58.969 50.000 1.93 0.00 0.00 3.33 F
4038 5427 1.472480 ACGCCATTGAATGTTAGTGCC 59.528 47.619 4.27 0.00 0.00 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2009 2288 0.106708 GGGAGACGCATGATTGCCTA 59.893 55.000 0.00 0.0 46.57 3.93 R
2013 2292 0.107508 ACCAGGGAGACGCATGATTG 60.108 55.000 0.00 0.0 0.00 2.67 R
2014 2293 0.179000 GACCAGGGAGACGCATGATT 59.821 55.000 0.00 0.0 0.00 2.57 R
2322 2659 0.454196 ACAACTCGTGGGTTTTGCAC 59.546 50.000 0.00 0.0 0.00 4.57 R
3967 5356 0.678395 CTCCATGAGAGCGGCATAGT 59.322 55.000 1.45 0.0 35.31 2.12 R
4062 5451 1.001181 CAAGTTGGACAGGGCATTTGG 59.999 52.381 0.00 0.0 0.00 3.28 R
4956 6396 0.106519 CTGGCCATCAAAGGGTAGGG 60.107 60.000 5.51 0.0 0.00 3.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 4.127744 CGGCCATGTGGACCCCAT 62.128 66.667 2.24 0.00 41.34 4.00
20 21 2.123726 GGCCATGTGGACCCCATC 60.124 66.667 0.00 0.00 37.19 3.51
21 22 2.693871 GGCCATGTGGACCCCATCT 61.694 63.158 0.00 0.00 37.19 2.90
22 23 1.454479 GCCATGTGGACCCCATCTG 60.454 63.158 2.55 0.00 35.28 2.90
23 24 2.001803 CCATGTGGACCCCATCTGT 58.998 57.895 0.00 0.00 35.28 3.41
24 25 0.107017 CCATGTGGACCCCATCTGTC 60.107 60.000 0.00 0.00 35.28 3.51
28 29 3.480133 GGACCCCATCTGTCCCGG 61.480 72.222 0.00 0.00 45.38 5.73
29 30 2.687566 GACCCCATCTGTCCCGGT 60.688 66.667 0.00 0.00 0.00 5.28
30 31 2.204090 ACCCCATCTGTCCCGGTT 60.204 61.111 0.00 0.00 0.00 4.44
31 32 2.253403 GACCCCATCTGTCCCGGTTC 62.253 65.000 0.00 0.00 0.00 3.62
32 33 2.186903 CCCATCTGTCCCGGTTCG 59.813 66.667 0.00 0.00 0.00 3.95
33 34 2.656069 CCCATCTGTCCCGGTTCGT 61.656 63.158 0.00 0.00 0.00 3.85
34 35 1.324740 CCCATCTGTCCCGGTTCGTA 61.325 60.000 0.00 0.00 0.00 3.43
35 36 0.102481 CCATCTGTCCCGGTTCGTAG 59.898 60.000 0.00 0.00 0.00 3.51
36 37 0.102481 CATCTGTCCCGGTTCGTAGG 59.898 60.000 0.00 0.00 0.00 3.18
37 38 1.673808 ATCTGTCCCGGTTCGTAGGC 61.674 60.000 0.00 0.00 0.00 3.93
38 39 3.695022 CTGTCCCGGTTCGTAGGCG 62.695 68.421 0.00 0.00 39.92 5.52
39 40 3.443045 GTCCCGGTTCGTAGGCGA 61.443 66.667 0.00 0.00 46.36 5.54
47 48 3.443045 TCGTAGGCGAACCGGGAC 61.443 66.667 6.32 0.00 44.92 4.46
48 49 3.446570 CGTAGGCGAACCGGGACT 61.447 66.667 6.32 0.00 42.76 3.85
49 50 2.114670 CGTAGGCGAACCGGGACTA 61.115 63.158 6.32 0.00 42.76 2.59
50 51 1.656818 CGTAGGCGAACCGGGACTAA 61.657 60.000 6.32 0.00 42.76 2.24
51 52 0.532115 GTAGGCGAACCGGGACTAAA 59.468 55.000 6.32 0.00 42.76 1.85
52 53 0.819582 TAGGCGAACCGGGACTAAAG 59.180 55.000 6.32 0.00 42.76 1.85
53 54 1.449070 GGCGAACCGGGACTAAAGG 60.449 63.158 6.32 0.00 0.00 3.11
54 55 1.294459 GCGAACCGGGACTAAAGGT 59.706 57.895 6.32 0.00 40.50 3.50
55 56 0.532115 GCGAACCGGGACTAAAGGTA 59.468 55.000 6.32 0.00 37.26 3.08
56 57 1.137675 GCGAACCGGGACTAAAGGTAT 59.862 52.381 6.32 0.00 37.26 2.73
57 58 2.419159 GCGAACCGGGACTAAAGGTATT 60.419 50.000 6.32 0.00 37.26 1.89
58 59 3.192466 CGAACCGGGACTAAAGGTATTG 58.808 50.000 6.32 0.00 37.26 1.90
59 60 3.538591 GAACCGGGACTAAAGGTATTGG 58.461 50.000 6.32 0.00 37.26 3.16
60 61 1.841919 ACCGGGACTAAAGGTATTGGG 59.158 52.381 6.32 0.00 36.34 4.12
61 62 1.476291 CCGGGACTAAAGGTATTGGGC 60.476 57.143 0.00 0.00 0.00 5.36
62 63 1.489230 CGGGACTAAAGGTATTGGGCT 59.511 52.381 0.00 0.00 0.00 5.19
63 64 2.092592 CGGGACTAAAGGTATTGGGCTT 60.093 50.000 0.00 0.00 0.00 4.35
64 65 3.623954 CGGGACTAAAGGTATTGGGCTTT 60.624 47.826 0.00 0.00 0.00 3.51
65 66 4.384427 CGGGACTAAAGGTATTGGGCTTTA 60.384 45.833 0.00 0.00 0.00 1.85
66 67 5.131067 GGGACTAAAGGTATTGGGCTTTAG 58.869 45.833 1.97 1.97 42.08 1.85
68 69 6.126681 GGGACTAAAGGTATTGGGCTTTAGTA 60.127 42.308 6.31 0.00 46.28 1.82
69 70 6.765036 GGACTAAAGGTATTGGGCTTTAGTAC 59.235 42.308 6.31 2.72 46.28 2.73
70 71 6.656902 ACTAAAGGTATTGGGCTTTAGTACC 58.343 40.000 5.23 3.35 45.23 3.34
71 72 3.832615 AGGTATTGGGCTTTAGTACCG 57.167 47.619 0.00 0.00 39.74 4.02
72 73 3.377573 AGGTATTGGGCTTTAGTACCGA 58.622 45.455 0.00 0.00 39.74 4.69
73 74 3.133542 AGGTATTGGGCTTTAGTACCGAC 59.866 47.826 0.00 0.00 39.74 4.79
74 75 2.704464 ATTGGGCTTTAGTACCGACC 57.296 50.000 0.00 0.00 0.00 4.79
75 76 0.614812 TTGGGCTTTAGTACCGACCC 59.385 55.000 0.00 0.00 37.88 4.46
76 77 0.252375 TGGGCTTTAGTACCGACCCT 60.252 55.000 8.11 0.00 38.23 4.34
77 78 0.907486 GGGCTTTAGTACCGACCCTT 59.093 55.000 0.00 0.00 34.34 3.95
78 79 1.280133 GGGCTTTAGTACCGACCCTTT 59.720 52.381 0.00 0.00 34.34 3.11
79 80 2.501316 GGGCTTTAGTACCGACCCTTTA 59.499 50.000 0.00 0.00 34.34 1.85
80 81 3.431346 GGGCTTTAGTACCGACCCTTTAG 60.431 52.174 0.00 0.00 34.34 1.85
81 82 3.196469 GGCTTTAGTACCGACCCTTTAGT 59.804 47.826 0.00 0.00 0.00 2.24
82 83 4.428209 GCTTTAGTACCGACCCTTTAGTC 58.572 47.826 0.00 0.00 0.00 2.59
83 84 4.679106 GCTTTAGTACCGACCCTTTAGTCC 60.679 50.000 0.00 0.00 32.91 3.85
84 85 1.857965 AGTACCGACCCTTTAGTCCC 58.142 55.000 0.00 0.00 32.91 4.46
85 86 0.457443 GTACCGACCCTTTAGTCCCG 59.543 60.000 0.00 0.00 32.91 5.14
86 87 0.684153 TACCGACCCTTTAGTCCCGG 60.684 60.000 0.00 0.00 42.30 5.73
87 88 1.986210 CCGACCCTTTAGTCCCGGT 60.986 63.158 0.00 0.00 32.91 5.28
88 89 1.547472 CCGACCCTTTAGTCCCGGTT 61.547 60.000 0.00 0.00 32.91 4.44
89 90 0.108472 CGACCCTTTAGTCCCGGTTC 60.108 60.000 0.00 0.00 32.91 3.62
90 91 0.251354 GACCCTTTAGTCCCGGTTCC 59.749 60.000 0.00 0.00 0.00 3.62
91 92 1.219935 CCCTTTAGTCCCGGTTCCG 59.780 63.158 0.00 4.08 0.00 4.30
107 108 3.585856 CGGAACCGGGACAAATGG 58.414 61.111 6.32 0.00 35.56 3.16
108 109 2.043980 CGGAACCGGGACAAATGGG 61.044 63.158 6.32 0.00 35.56 4.00
109 110 2.348104 GGAACCGGGACAAATGGGC 61.348 63.158 6.32 0.00 0.00 5.36
110 111 2.283604 AACCGGGACAAATGGGCC 60.284 61.111 6.32 0.00 0.00 5.80
111 112 2.781431 GAACCGGGACAAATGGGCCT 62.781 60.000 6.32 0.00 0.00 5.19
112 113 2.037208 CCGGGACAAATGGGCCTT 59.963 61.111 4.53 0.00 0.00 4.35
113 114 1.304952 CCGGGACAAATGGGCCTTA 59.695 57.895 4.53 0.00 0.00 2.69
114 115 0.106217 CCGGGACAAATGGGCCTTAT 60.106 55.000 4.53 0.00 0.00 1.73
115 116 1.032014 CGGGACAAATGGGCCTTATG 58.968 55.000 4.53 3.10 0.00 1.90
116 117 1.409521 CGGGACAAATGGGCCTTATGA 60.410 52.381 4.53 0.00 0.00 2.15
117 118 2.745968 GGGACAAATGGGCCTTATGAA 58.254 47.619 4.53 0.00 0.00 2.57
118 119 2.430694 GGGACAAATGGGCCTTATGAAC 59.569 50.000 4.53 1.58 0.00 3.18
119 120 2.430694 GGACAAATGGGCCTTATGAACC 59.569 50.000 4.53 6.66 0.00 3.62
120 121 2.099098 GACAAATGGGCCTTATGAACCG 59.901 50.000 4.53 0.00 0.00 4.44
121 122 1.408702 CAAATGGGCCTTATGAACCGG 59.591 52.381 4.53 0.00 0.00 5.28
122 123 0.106217 AATGGGCCTTATGAACCGGG 60.106 55.000 6.32 0.00 0.00 5.73
123 124 0.991355 ATGGGCCTTATGAACCGGGA 60.991 55.000 6.32 0.00 0.00 5.14
124 125 1.153025 GGGCCTTATGAACCGGGAC 60.153 63.158 6.32 0.00 0.00 4.46
125 126 1.605453 GGCCTTATGAACCGGGACA 59.395 57.895 6.32 5.75 0.00 4.02
126 127 0.034863 GGCCTTATGAACCGGGACAA 60.035 55.000 6.32 0.00 0.00 3.18
127 128 1.614850 GGCCTTATGAACCGGGACAAA 60.615 52.381 6.32 2.62 0.00 2.83
128 129 2.375146 GCCTTATGAACCGGGACAAAT 58.625 47.619 6.32 0.00 0.00 2.32
129 130 2.099098 GCCTTATGAACCGGGACAAATG 59.901 50.000 6.32 0.20 0.00 2.32
130 131 2.687935 CCTTATGAACCGGGACAAATGG 59.312 50.000 6.32 5.49 0.00 3.16
131 132 2.428544 TATGAACCGGGACAAATGGG 57.571 50.000 6.32 0.00 0.00 4.00
132 133 0.970427 ATGAACCGGGACAAATGGGC 60.970 55.000 6.32 0.00 0.00 5.36
133 134 2.283604 AACCGGGACAAATGGGCC 60.284 61.111 6.32 0.00 0.00 5.80
134 135 2.781431 GAACCGGGACAAATGGGCCT 62.781 60.000 6.32 0.00 0.00 5.19
135 136 2.037208 CCGGGACAAATGGGCCTT 59.963 61.111 4.53 0.00 0.00 4.35
136 137 1.609210 CCGGGACAAATGGGCCTTT 60.609 57.895 4.53 0.76 0.00 3.11
137 138 1.191489 CCGGGACAAATGGGCCTTTT 61.191 55.000 11.35 11.35 0.00 2.27
138 139 0.684535 CGGGACAAATGGGCCTTTTT 59.315 50.000 14.22 6.91 0.00 1.94
139 140 1.337728 CGGGACAAATGGGCCTTTTTC 60.338 52.381 14.22 13.86 0.00 2.29
140 141 1.977854 GGGACAAATGGGCCTTTTTCT 59.022 47.619 14.22 3.47 0.00 2.52
141 142 3.169908 GGGACAAATGGGCCTTTTTCTA 58.830 45.455 14.22 0.00 0.00 2.10
142 143 3.056107 GGGACAAATGGGCCTTTTTCTAC 60.056 47.826 14.22 4.24 0.00 2.59
143 144 3.832490 GGACAAATGGGCCTTTTTCTACT 59.168 43.478 14.22 0.00 0.00 2.57
144 145 5.014202 GGACAAATGGGCCTTTTTCTACTA 58.986 41.667 14.22 0.00 0.00 1.82
145 146 5.125578 GGACAAATGGGCCTTTTTCTACTAG 59.874 44.000 14.22 4.93 0.00 2.57
146 147 5.641155 ACAAATGGGCCTTTTTCTACTAGT 58.359 37.500 14.22 0.00 0.00 2.57
147 148 5.476945 ACAAATGGGCCTTTTTCTACTAGTG 59.523 40.000 14.22 4.27 0.00 2.74
166 167 3.254166 AGTGCAACATGATCAAACTGGAC 59.746 43.478 14.23 14.23 41.43 4.02
193 194 6.259550 AGTAGCATCCTTGTCAATTTGTTC 57.740 37.500 0.00 0.00 0.00 3.18
200 201 5.531634 TCCTTGTCAATTTGTTCTGCAATC 58.468 37.500 0.00 0.00 36.89 2.67
202 203 5.754406 CCTTGTCAATTTGTTCTGCAATCAA 59.246 36.000 0.00 0.00 36.89 2.57
234 235 9.144747 CCCAAGTATCATCTTTGAGATTATACG 57.855 37.037 12.85 0.00 42.42 3.06
286 287 5.283457 AGCCAGTCAAATAGGACTACATC 57.717 43.478 0.00 0.00 46.05 3.06
288 289 5.367937 AGCCAGTCAAATAGGACTACATCAT 59.632 40.000 0.00 0.00 46.05 2.45
303 304 2.972713 ACATCATGCCTTATACCGTCCT 59.027 45.455 0.00 0.00 0.00 3.85
304 305 3.006967 ACATCATGCCTTATACCGTCCTC 59.993 47.826 0.00 0.00 0.00 3.71
305 306 2.673258 TCATGCCTTATACCGTCCTCA 58.327 47.619 0.00 0.00 0.00 3.86
307 308 3.452990 TCATGCCTTATACCGTCCTCAAA 59.547 43.478 0.00 0.00 0.00 2.69
309 310 4.497291 TGCCTTATACCGTCCTCAAAAT 57.503 40.909 0.00 0.00 0.00 1.82
310 311 4.448210 TGCCTTATACCGTCCTCAAAATC 58.552 43.478 0.00 0.00 0.00 2.17
311 312 4.080807 TGCCTTATACCGTCCTCAAAATCA 60.081 41.667 0.00 0.00 0.00 2.57
313 314 5.220796 GCCTTATACCGTCCTCAAAATCAAC 60.221 44.000 0.00 0.00 0.00 3.18
314 315 5.296035 CCTTATACCGTCCTCAAAATCAACC 59.704 44.000 0.00 0.00 0.00 3.77
315 316 2.649531 ACCGTCCTCAAAATCAACCA 57.350 45.000 0.00 0.00 0.00 3.67
316 317 2.938838 ACCGTCCTCAAAATCAACCAA 58.061 42.857 0.00 0.00 0.00 3.67
318 319 3.146066 CCGTCCTCAAAATCAACCAAGA 58.854 45.455 0.00 0.00 0.00 3.02
319 320 3.058224 CCGTCCTCAAAATCAACCAAGAC 60.058 47.826 0.00 0.00 0.00 3.01
320 321 3.058224 CGTCCTCAAAATCAACCAAGACC 60.058 47.826 0.00 0.00 0.00 3.85
321 322 3.888930 GTCCTCAAAATCAACCAAGACCA 59.111 43.478 0.00 0.00 0.00 4.02
322 323 3.888930 TCCTCAAAATCAACCAAGACCAC 59.111 43.478 0.00 0.00 0.00 4.16
323 324 3.636300 CCTCAAAATCAACCAAGACCACA 59.364 43.478 0.00 0.00 0.00 4.17
324 325 4.099266 CCTCAAAATCAACCAAGACCACAA 59.901 41.667 0.00 0.00 0.00 3.33
325 326 5.004922 TCAAAATCAACCAAGACCACAAC 57.995 39.130 0.00 0.00 0.00 3.32
326 327 4.464244 TCAAAATCAACCAAGACCACAACA 59.536 37.500 0.00 0.00 0.00 3.33
327 328 5.128499 TCAAAATCAACCAAGACCACAACAT 59.872 36.000 0.00 0.00 0.00 2.71
328 329 5.612725 AAATCAACCAAGACCACAACATT 57.387 34.783 0.00 0.00 0.00 2.71
329 330 4.853924 ATCAACCAAGACCACAACATTC 57.146 40.909 0.00 0.00 0.00 2.67
330 331 3.897239 TCAACCAAGACCACAACATTCT 58.103 40.909 0.00 0.00 0.00 2.40
331 332 4.277476 TCAACCAAGACCACAACATTCTT 58.723 39.130 0.00 0.00 0.00 2.52
332 333 4.097741 TCAACCAAGACCACAACATTCTTG 59.902 41.667 3.98 3.98 43.93 3.02
333 334 2.362077 ACCAAGACCACAACATTCTTGC 59.638 45.455 5.25 0.00 43.28 4.01
334 335 2.624838 CCAAGACCACAACATTCTTGCT 59.375 45.455 5.25 0.00 43.28 3.91
335 336 3.304928 CCAAGACCACAACATTCTTGCTC 60.305 47.826 5.25 0.00 43.28 4.26
336 337 3.213206 AGACCACAACATTCTTGCTCA 57.787 42.857 0.00 0.00 0.00 4.26
337 338 3.759581 AGACCACAACATTCTTGCTCAT 58.240 40.909 0.00 0.00 0.00 2.90
338 339 4.910195 AGACCACAACATTCTTGCTCATA 58.090 39.130 0.00 0.00 0.00 2.15
339 340 5.503927 AGACCACAACATTCTTGCTCATAT 58.496 37.500 0.00 0.00 0.00 1.78
340 341 5.356190 AGACCACAACATTCTTGCTCATATG 59.644 40.000 0.00 0.00 0.00 1.78
341 342 4.142315 ACCACAACATTCTTGCTCATATGC 60.142 41.667 0.00 0.00 0.00 3.14
342 343 4.357142 CACAACATTCTTGCTCATATGCC 58.643 43.478 0.00 0.00 0.00 4.40
343 344 4.018490 ACAACATTCTTGCTCATATGCCA 58.982 39.130 0.00 0.00 0.00 4.92
344 345 4.142315 ACAACATTCTTGCTCATATGCCAC 60.142 41.667 0.00 0.00 0.00 5.01
345 346 2.615447 ACATTCTTGCTCATATGCCACG 59.385 45.455 0.00 0.00 0.00 4.94
346 347 1.667236 TTCTTGCTCATATGCCACGG 58.333 50.000 0.00 0.00 0.00 4.94
347 348 0.541392 TCTTGCTCATATGCCACGGT 59.459 50.000 0.00 0.00 0.00 4.83
348 349 0.659427 CTTGCTCATATGCCACGGTG 59.341 55.000 0.00 0.00 0.00 4.94
349 350 0.251634 TTGCTCATATGCCACGGTGA 59.748 50.000 10.28 0.00 0.00 4.02
350 351 0.251634 TGCTCATATGCCACGGTGAA 59.748 50.000 10.28 0.00 0.00 3.18
351 352 0.657840 GCTCATATGCCACGGTGAAC 59.342 55.000 10.28 1.80 0.00 3.18
352 353 1.299541 CTCATATGCCACGGTGAACC 58.700 55.000 10.28 0.00 0.00 3.62
353 354 0.615850 TCATATGCCACGGTGAACCA 59.384 50.000 10.28 4.22 35.14 3.67
354 355 1.003696 TCATATGCCACGGTGAACCAA 59.996 47.619 10.28 0.00 35.14 3.67
355 356 1.132262 CATATGCCACGGTGAACCAAC 59.868 52.381 10.28 0.00 35.14 3.77
356 357 0.398696 TATGCCACGGTGAACCAACT 59.601 50.000 10.28 0.00 35.14 3.16
357 358 0.889186 ATGCCACGGTGAACCAACTC 60.889 55.000 10.28 0.00 35.14 3.01
358 359 2.604174 GCCACGGTGAACCAACTCG 61.604 63.158 10.28 0.00 35.14 4.18
359 360 1.959226 CCACGGTGAACCAACTCGG 60.959 63.158 10.28 0.00 42.50 4.63
360 361 1.068417 CACGGTGAACCAACTCGGA 59.932 57.895 0.74 0.00 38.63 4.55
361 362 0.320421 CACGGTGAACCAACTCGGAT 60.320 55.000 0.74 0.00 38.63 4.18
362 363 0.395312 ACGGTGAACCAACTCGGATT 59.605 50.000 0.00 0.00 38.63 3.01
363 364 1.076332 CGGTGAACCAACTCGGATTC 58.924 55.000 0.00 0.00 38.63 2.52
364 365 1.337823 CGGTGAACCAACTCGGATTCT 60.338 52.381 0.00 0.00 38.63 2.40
365 366 2.094390 CGGTGAACCAACTCGGATTCTA 60.094 50.000 0.00 0.00 38.63 2.10
366 367 3.430374 CGGTGAACCAACTCGGATTCTAT 60.430 47.826 0.00 0.00 38.63 1.98
367 368 4.120589 GGTGAACCAACTCGGATTCTATC 58.879 47.826 0.00 0.00 38.63 2.08
368 369 4.382685 GGTGAACCAACTCGGATTCTATCA 60.383 45.833 0.00 0.00 38.63 2.15
369 370 4.567159 GTGAACCAACTCGGATTCTATCAC 59.433 45.833 0.00 0.00 38.63 3.06
370 371 3.438297 ACCAACTCGGATTCTATCACG 57.562 47.619 0.00 0.00 38.63 4.35
371 372 3.021695 ACCAACTCGGATTCTATCACGA 58.978 45.455 0.00 0.00 38.63 4.35
372 373 3.637229 ACCAACTCGGATTCTATCACGAT 59.363 43.478 0.00 0.00 38.63 3.73
373 374 4.230657 CCAACTCGGATTCTATCACGATC 58.769 47.826 0.00 0.00 36.56 3.69
374 375 4.022762 CCAACTCGGATTCTATCACGATCT 60.023 45.833 0.00 0.00 36.56 2.75
375 376 5.150683 CAACTCGGATTCTATCACGATCTC 58.849 45.833 0.00 0.00 33.68 2.75
376 377 3.433957 ACTCGGATTCTATCACGATCTCG 59.566 47.826 0.00 0.00 46.33 4.04
377 378 2.159824 TCGGATTCTATCACGATCTCGC 59.840 50.000 0.00 0.00 44.43 5.03
378 379 2.160615 CGGATTCTATCACGATCTCGCT 59.839 50.000 0.00 0.00 44.43 4.93
379 380 3.497118 GGATTCTATCACGATCTCGCTG 58.503 50.000 0.00 0.00 44.43 5.18
380 381 3.057876 GGATTCTATCACGATCTCGCTGT 60.058 47.826 0.00 0.00 44.43 4.40
381 382 3.340337 TTCTATCACGATCTCGCTGTG 57.660 47.619 0.00 0.00 44.43 3.66
382 383 2.561569 TCTATCACGATCTCGCTGTGA 58.438 47.619 0.00 3.33 45.71 3.58
384 385 3.926289 TCACGATCTCGCTGTGATC 57.074 52.632 0.00 9.22 44.43 2.92
385 386 0.382158 TCACGATCTCGCTGTGATCC 59.618 55.000 0.00 0.00 44.43 3.36
386 387 0.101219 CACGATCTCGCTGTGATCCA 59.899 55.000 0.00 0.00 44.43 3.41
387 388 0.817654 ACGATCTCGCTGTGATCCAA 59.182 50.000 0.00 0.00 44.43 3.53
388 389 1.204704 ACGATCTCGCTGTGATCCAAA 59.795 47.619 0.00 0.00 44.43 3.28
389 390 1.590238 CGATCTCGCTGTGATCCAAAC 59.410 52.381 11.97 0.00 37.59 2.93
390 391 2.736719 CGATCTCGCTGTGATCCAAACT 60.737 50.000 11.97 0.00 37.59 2.66
391 392 2.370281 TCTCGCTGTGATCCAAACTC 57.630 50.000 0.00 0.00 0.00 3.01
392 393 1.066858 TCTCGCTGTGATCCAAACTCC 60.067 52.381 0.00 0.00 0.00 3.85
393 394 0.036388 TCGCTGTGATCCAAACTCCC 60.036 55.000 0.00 0.00 0.00 4.30
394 395 1.026718 CGCTGTGATCCAAACTCCCC 61.027 60.000 0.00 0.00 0.00 4.81
395 396 0.681243 GCTGTGATCCAAACTCCCCC 60.681 60.000 0.00 0.00 0.00 5.40
396 397 0.698238 CTGTGATCCAAACTCCCCCA 59.302 55.000 0.00 0.00 0.00 4.96
397 398 0.404040 TGTGATCCAAACTCCCCCAC 59.596 55.000 0.00 0.00 0.00 4.61
398 399 0.404040 GTGATCCAAACTCCCCCACA 59.596 55.000 0.00 0.00 0.00 4.17
399 400 1.153539 TGATCCAAACTCCCCCACAA 58.846 50.000 0.00 0.00 0.00 3.33
400 401 1.501170 TGATCCAAACTCCCCCACAAA 59.499 47.619 0.00 0.00 0.00 2.83
401 402 2.091055 TGATCCAAACTCCCCCACAAAA 60.091 45.455 0.00 0.00 0.00 2.44
402 403 2.080654 TCCAAACTCCCCCACAAAAG 57.919 50.000 0.00 0.00 0.00 2.27
403 404 1.289530 TCCAAACTCCCCCACAAAAGT 59.710 47.619 0.00 0.00 0.00 2.66
404 405 1.412343 CCAAACTCCCCCACAAAAGTG 59.588 52.381 0.00 0.00 0.00 3.16
405 406 2.107366 CAAACTCCCCCACAAAAGTGT 58.893 47.619 0.00 0.00 39.07 3.55
406 407 2.499693 CAAACTCCCCCACAAAAGTGTT 59.500 45.455 0.00 0.00 35.07 3.32
407 408 2.543037 ACTCCCCCACAAAAGTGTTT 57.457 45.000 0.00 0.00 35.07 2.83
408 409 2.827755 ACTCCCCCACAAAAGTGTTTT 58.172 42.857 0.00 0.00 35.07 2.43
409 410 2.764010 ACTCCCCCACAAAAGTGTTTTC 59.236 45.455 0.00 0.00 35.07 2.29
410 411 3.031013 CTCCCCCACAAAAGTGTTTTCT 58.969 45.455 0.00 0.00 35.07 2.52
411 412 3.028130 TCCCCCACAAAAGTGTTTTCTC 58.972 45.455 0.00 0.00 35.07 2.87
412 413 2.102420 CCCCCACAAAAGTGTTTTCTCC 59.898 50.000 0.00 0.00 35.07 3.71
413 414 2.102420 CCCCACAAAAGTGTTTTCTCCC 59.898 50.000 0.00 0.00 35.07 4.30
414 415 2.763448 CCCACAAAAGTGTTTTCTCCCA 59.237 45.455 0.00 0.00 35.07 4.37
415 416 3.387699 CCCACAAAAGTGTTTTCTCCCAT 59.612 43.478 0.00 0.00 35.07 4.00
416 417 4.141733 CCCACAAAAGTGTTTTCTCCCATT 60.142 41.667 0.00 0.00 35.07 3.16
417 418 4.810491 CCACAAAAGTGTTTTCTCCCATTG 59.190 41.667 0.00 0.00 35.07 2.82
418 419 5.395103 CCACAAAAGTGTTTTCTCCCATTGA 60.395 40.000 0.00 0.00 35.07 2.57
423 424 5.246981 AGTGTTTTCTCCCATTGATCTGA 57.753 39.130 0.00 0.00 0.00 3.27
427 428 6.810182 GTGTTTTCTCCCATTGATCTGAATTG 59.190 38.462 0.00 0.00 0.00 2.32
434 435 0.032217 TTGATCTGAATTGGGGCCCC 60.032 55.000 36.14 36.14 0.00 5.80
436 437 1.994885 GATCTGAATTGGGGCCCCGA 61.995 60.000 34.27 34.27 39.42 5.14
455 456 2.911143 GGACTCACCCATGCCGAT 59.089 61.111 0.00 0.00 0.00 4.18
457 458 1.592669 GACTCACCCATGCCGATCG 60.593 63.158 8.51 8.51 0.00 3.69
458 459 2.016393 GACTCACCCATGCCGATCGA 62.016 60.000 18.66 0.00 0.00 3.59
459 460 1.143838 CTCACCCATGCCGATCGAA 59.856 57.895 18.66 4.61 0.00 3.71
460 461 0.877649 CTCACCCATGCCGATCGAAG 60.878 60.000 18.66 1.12 0.00 3.79
469 470 3.257561 CGATCGAAGGCACTGGCG 61.258 66.667 10.26 0.00 40.86 5.69
487 488 3.689161 TGGCGATAGTTTGGATGTGAAAG 59.311 43.478 0.00 0.00 39.35 2.62
493 494 8.345565 GCGATAGTTTGGATGTGAAAGATATTT 58.654 33.333 0.00 0.00 39.35 1.40
504 505 5.918011 TGTGAAAGATATTTCGGTGCAAAAC 59.082 36.000 8.21 0.00 33.80 2.43
505 506 5.059221 GTGAAAGATATTTCGGTGCAAAACG 59.941 40.000 8.21 0.00 33.80 3.60
514 515 1.081442 GTGCAAAACGCTACCAGCC 60.081 57.895 0.00 0.00 43.06 4.85
534 535 2.421619 CAAGAGCCACTTCTTCACCTC 58.578 52.381 0.00 0.00 35.28 3.85
535 536 0.980423 AGAGCCACTTCTTCACCTCC 59.020 55.000 0.00 0.00 0.00 4.30
544 545 0.547712 TCTTCACCTCCCCTTCCCTG 60.548 60.000 0.00 0.00 0.00 4.45
555 556 4.054369 TCCCCTTCCCTGTCATTGATTAT 58.946 43.478 0.00 0.00 0.00 1.28
557 558 4.141181 CCCCTTCCCTGTCATTGATTATCA 60.141 45.833 0.00 0.00 0.00 2.15
563 564 4.649692 CCTGTCATTGATTATCAGGGGAG 58.350 47.826 11.46 0.00 41.10 4.30
566 567 4.202253 TGTCATTGATTATCAGGGGAGTCG 60.202 45.833 0.00 0.00 0.00 4.18
585 586 0.598680 GCCTCCTCGTCCATGATTCG 60.599 60.000 0.00 0.00 0.00 3.34
592 593 3.797256 CCTCGTCCATGATTCGTAGTTTC 59.203 47.826 0.00 0.00 0.00 2.78
594 595 2.864343 CGTCCATGATTCGTAGTTTCCC 59.136 50.000 0.00 0.00 0.00 3.97
595 596 3.203716 GTCCATGATTCGTAGTTTCCCC 58.796 50.000 0.00 0.00 0.00 4.81
596 597 2.159014 TCCATGATTCGTAGTTTCCCCG 60.159 50.000 0.00 0.00 0.00 5.73
607 608 2.951101 TTTCCCCGACGCCTCTTCC 61.951 63.158 0.00 0.00 0.00 3.46
664 666 1.130054 ACTCCTTCTGCTTGCCTCCA 61.130 55.000 0.00 0.00 0.00 3.86
669 671 0.694771 TTCTGCTTGCCTCCAGATGT 59.305 50.000 0.00 0.00 37.87 3.06
670 672 0.035725 TCTGCTTGCCTCCAGATGTG 60.036 55.000 0.00 0.00 33.44 3.21
671 673 0.322277 CTGCTTGCCTCCAGATGTGT 60.322 55.000 0.00 0.00 0.00 3.72
672 674 0.983467 TGCTTGCCTCCAGATGTGTA 59.017 50.000 0.00 0.00 0.00 2.90
673 675 1.339055 TGCTTGCCTCCAGATGTGTAC 60.339 52.381 0.00 0.00 0.00 2.90
675 677 0.249120 TTGCCTCCAGATGTGTACGG 59.751 55.000 0.00 0.00 0.00 4.02
676 678 0.613572 TGCCTCCAGATGTGTACGGA 60.614 55.000 0.00 0.00 0.00 4.69
677 679 0.753262 GCCTCCAGATGTGTACGGAT 59.247 55.000 0.00 0.00 0.00 4.18
678 680 1.539065 GCCTCCAGATGTGTACGGATG 60.539 57.143 0.00 0.00 0.00 3.51
679 681 1.757118 CCTCCAGATGTGTACGGATGT 59.243 52.381 0.00 0.00 0.00 3.06
680 682 2.956333 CCTCCAGATGTGTACGGATGTA 59.044 50.000 0.00 0.00 0.00 2.29
682 684 4.765339 CCTCCAGATGTGTACGGATGTATA 59.235 45.833 0.00 0.00 32.11 1.47
683 685 5.419155 CCTCCAGATGTGTACGGATGTATAT 59.581 44.000 0.00 0.00 32.11 0.86
685 687 7.122204 CCTCCAGATGTGTACGGATGTATATAA 59.878 40.741 0.00 0.00 32.11 0.98
686 688 8.411991 TCCAGATGTGTACGGATGTATATAAA 57.588 34.615 0.00 0.00 32.11 1.40
687 689 8.301720 TCCAGATGTGTACGGATGTATATAAAC 58.698 37.037 0.00 0.00 32.11 2.01
688 690 8.085909 CCAGATGTGTACGGATGTATATAAACA 58.914 37.037 0.00 0.00 32.11 2.83
689 691 9.639601 CAGATGTGTACGGATGTATATAAACAT 57.360 33.333 0.00 0.00 42.75 2.71
720 722 8.976986 AAGTGTAGATTCATTCATTTTGCTTC 57.023 30.769 0.00 0.00 0.00 3.86
721 723 7.246311 AGTGTAGATTCATTCATTTTGCTTCG 58.754 34.615 0.00 0.00 0.00 3.79
722 724 7.023575 GTGTAGATTCATTCATTTTGCTTCGT 58.976 34.615 0.00 0.00 0.00 3.85
723 725 8.175069 GTGTAGATTCATTCATTTTGCTTCGTA 58.825 33.333 0.00 0.00 0.00 3.43
724 726 8.892723 TGTAGATTCATTCATTTTGCTTCGTAT 58.107 29.630 0.00 0.00 0.00 3.06
725 727 9.162793 GTAGATTCATTCATTTTGCTTCGTATG 57.837 33.333 0.00 0.00 0.00 2.39
726 728 7.765307 AGATTCATTCATTTTGCTTCGTATGT 58.235 30.769 0.00 0.00 0.00 2.29
727 729 8.892723 AGATTCATTCATTTTGCTTCGTATGTA 58.107 29.630 0.00 0.00 0.00 2.29
728 730 9.502145 GATTCATTCATTTTGCTTCGTATGTAA 57.498 29.630 0.00 0.00 0.00 2.41
730 732 9.853555 TTCATTCATTTTGCTTCGTATGTAATT 57.146 25.926 0.00 0.00 0.00 1.40
732 734 9.288124 CATTCATTTTGCTTCGTATGTAATTCA 57.712 29.630 0.00 0.00 0.00 2.57
777 779 9.868160 AAAAGACTTATATTTAGGAATGGAGGG 57.132 33.333 0.00 0.00 0.00 4.30
778 780 7.575499 AGACTTATATTTAGGAATGGAGGGG 57.425 40.000 0.00 0.00 0.00 4.79
783 785 8.998957 TTATATTTAGGAATGGAGGGGTATGA 57.001 34.615 0.00 0.00 0.00 2.15
785 787 6.606241 ATTTAGGAATGGAGGGGTATGAAA 57.394 37.500 0.00 0.00 0.00 2.69
786 788 6.606241 TTTAGGAATGGAGGGGTATGAAAT 57.394 37.500 0.00 0.00 0.00 2.17
787 789 6.606241 TTAGGAATGGAGGGGTATGAAATT 57.394 37.500 0.00 0.00 0.00 1.82
789 791 6.606241 AGGAATGGAGGGGTATGAAATTTA 57.394 37.500 0.00 0.00 0.00 1.40
790 792 7.179460 AGGAATGGAGGGGTATGAAATTTAT 57.821 36.000 0.00 0.00 0.00 1.40
976 1211 1.807165 CCCGTGATCGAGCACACAG 60.807 63.158 30.82 19.06 38.69 3.66
992 1228 0.329596 ACAGCTCCAATCCCCAAGTC 59.670 55.000 0.00 0.00 0.00 3.01
1005 1241 0.625849 CCAAGTCTAACCCCATGGCT 59.374 55.000 6.09 0.00 33.59 4.75
1948 2223 5.048921 TCTCAAGTCTTAGTCACGATCGTTT 60.049 40.000 20.14 9.88 0.00 3.60
2009 2288 4.772678 GGCTTCCAGGAGGCAAAT 57.227 55.556 24.23 0.00 41.49 2.32
2010 2289 3.903208 GGCTTCCAGGAGGCAAATA 57.097 52.632 24.23 0.00 41.49 1.40
2011 2290 1.685148 GGCTTCCAGGAGGCAAATAG 58.315 55.000 24.23 1.72 41.49 1.73
2012 2291 1.685148 GCTTCCAGGAGGCAAATAGG 58.315 55.000 18.66 0.00 34.72 2.57
2013 2292 1.685148 CTTCCAGGAGGCAAATAGGC 58.315 55.000 0.00 0.00 44.61 3.93
2196 2475 0.450184 GAGGAAGGCGCGCAATTTTA 59.550 50.000 34.42 0.00 0.00 1.52
2392 2729 1.031235 TGCCACTGGTGATTGTTGTG 58.969 50.000 1.93 0.00 0.00 3.33
2444 2781 2.238521 TGGGAAGTGTGGATTGCTTTC 58.761 47.619 0.00 0.00 0.00 2.62
2471 2808 5.767168 AGATCTGCATTTCCTAATACAAGCC 59.233 40.000 0.00 0.00 0.00 4.35
2583 3539 7.082602 TGCTTTGAGTTAGTTCTACTTCTACG 58.917 38.462 0.00 0.00 0.00 3.51
2624 3677 6.432472 AGAAGTTTATCCTTGAAAGCTTGAGG 59.568 38.462 14.56 14.56 0.00 3.86
2734 4046 8.951787 ATGTAAGTTCTTTGTTGTGTACTGTA 57.048 30.769 0.00 0.00 0.00 2.74
2779 4091 6.604396 TGAATTGATCTTAATCTGCCACACAT 59.396 34.615 0.00 0.00 32.75 3.21
2920 4232 9.657419 ACAATCATAGGAATTGGAAATTTTCAC 57.343 29.630 11.09 1.87 0.00 3.18
3070 4382 7.517614 TTTACATTCCTATGCACAAAGAACA 57.482 32.000 0.00 0.00 35.03 3.18
3758 5140 2.035832 ACTTGGCTGATTGTTTTTCCCG 59.964 45.455 0.00 0.00 0.00 5.14
3773 5155 1.950630 CCCGCAAAACTGCACAAGC 60.951 57.895 0.00 0.00 42.57 4.01
3896 5285 3.813724 GGGTTCCCTTATAAAGCTTAGCG 59.186 47.826 0.00 0.00 0.00 4.26
3915 5304 2.797156 GCGGTAGCACAATCTGATAGTG 59.203 50.000 0.00 0.00 44.35 2.74
3916 5305 3.738281 GCGGTAGCACAATCTGATAGTGT 60.738 47.826 0.00 0.00 44.35 3.55
3945 5334 8.279970 TGCAGTTTCAGTATTATGTGCTAATT 57.720 30.769 0.00 0.00 32.26 1.40
3947 5336 8.397906 GCAGTTTCAGTATTATGTGCTAATTGA 58.602 33.333 0.00 0.00 32.26 2.57
3963 5352 8.313931 GTGCTAATTGAAAATTAGAAATCGTGC 58.686 33.333 19.19 6.64 34.43 5.34
3967 5356 8.984891 AATTGAAAATTAGAAATCGTGCATCA 57.015 26.923 0.00 0.00 0.00 3.07
4017 5406 7.441157 TGTGCATAGCTAGTTGATATTTGTACC 59.559 37.037 0.00 0.00 0.00 3.34
4020 5409 7.359264 GCATAGCTAGTTGATATTTGTACCACG 60.359 40.741 0.00 0.00 0.00 4.94
4021 5410 4.809426 AGCTAGTTGATATTTGTACCACGC 59.191 41.667 0.00 0.00 0.00 5.34
4026 5415 4.891627 TGATATTTGTACCACGCCATTG 57.108 40.909 0.00 0.00 0.00 2.82
4028 5417 4.944317 TGATATTTGTACCACGCCATTGAA 59.056 37.500 0.00 0.00 0.00 2.69
4034 5423 3.687212 TGTACCACGCCATTGAATGTTAG 59.313 43.478 4.27 0.00 0.00 2.34
4038 5427 1.472480 ACGCCATTGAATGTTAGTGCC 59.528 47.619 4.27 0.00 0.00 5.01
4048 5437 4.083003 TGAATGTTAGTGCCAATCGGTTTC 60.083 41.667 0.00 0.00 33.28 2.78
4062 5451 6.314784 CAATCGGTTTCTTCCACTTATGAAC 58.685 40.000 0.00 0.00 0.00 3.18
4063 5452 4.320870 TCGGTTTCTTCCACTTATGAACC 58.679 43.478 0.00 0.00 0.00 3.62
4065 5454 4.517453 CGGTTTCTTCCACTTATGAACCAA 59.483 41.667 0.00 0.00 0.00 3.67
4079 5468 1.000843 GAACCAAATGCCCTGTCCAAC 59.999 52.381 0.00 0.00 0.00 3.77
4097 5486 5.922544 GTCCAACTTGTGAAAGATCAAATGG 59.077 40.000 0.00 0.00 37.30 3.16
4098 5487 5.010922 TCCAACTTGTGAAAGATCAAATGGG 59.989 40.000 0.00 0.00 37.30 4.00
4138 5528 8.876275 TTGAAATTTCCACTTCATTTTCTGAG 57.124 30.769 15.48 0.00 34.68 3.35
4175 5565 7.971201 TGATTCATACTGCTGAGGAATAATCT 58.029 34.615 0.00 0.00 0.00 2.40
4178 5568 6.990798 TCATACTGCTGAGGAATAATCTGAG 58.009 40.000 0.00 0.00 0.00 3.35
4249 5639 4.514441 GCTCTTTATGTATGCAGATGCTGT 59.486 41.667 6.35 0.00 42.66 4.40
4311 5701 2.112475 TTTGCATTTGACGGTGTTCG 57.888 45.000 0.00 0.00 45.88 3.95
4402 5792 3.133464 CACGGCGTACTCGGGGTA 61.133 66.667 14.22 0.00 37.56 3.69
4533 5952 4.524749 GAAACGGTTGCTAGAGTTGTTTC 58.475 43.478 0.00 3.36 37.59 2.78
4627 6061 5.160607 TGGAGGATTCGAACAAGTTATGT 57.839 39.130 0.00 0.00 46.82 2.29
4628 6062 6.288941 TGGAGGATTCGAACAAGTTATGTA 57.711 37.500 0.00 0.00 42.99 2.29
4629 6063 6.884832 TGGAGGATTCGAACAAGTTATGTAT 58.115 36.000 0.00 0.00 42.99 2.29
4630 6064 6.761242 TGGAGGATTCGAACAAGTTATGTATG 59.239 38.462 0.00 0.00 42.99 2.39
4671 6106 3.062369 GCTTATCTGCTCATCGATGCATC 59.938 47.826 20.81 17.10 38.59 3.91
4692 6128 2.160417 CGGAACTCTGATGAAAAGTGGC 59.840 50.000 0.00 0.00 0.00 5.01
4724 6160 3.119388 CGATTGCCAGTGGAAATCATGTT 60.119 43.478 33.26 7.36 45.65 2.71
4725 6161 3.663995 TTGCCAGTGGAAATCATGTTG 57.336 42.857 15.20 0.00 0.00 3.33
4726 6162 1.273048 TGCCAGTGGAAATCATGTTGC 59.727 47.619 15.20 0.00 0.00 4.17
4727 6163 1.273048 GCCAGTGGAAATCATGTTGCA 59.727 47.619 15.20 0.00 0.00 4.08
4728 6164 2.927871 GCCAGTGGAAATCATGTTGCAC 60.928 50.000 15.20 11.31 46.74 4.57
4748 6184 0.528017 TTGCACTAGCTCGTCCTCAG 59.472 55.000 0.00 0.00 42.74 3.35
4752 6188 2.478200 GCACTAGCTCGTCCTCAGTTAC 60.478 54.545 0.00 0.00 37.91 2.50
4797 6237 6.150396 AGATAGTCCTCAATTACCTCAACG 57.850 41.667 0.00 0.00 0.00 4.10
4812 6252 2.942796 AACGCCTGGATCGCTGACA 61.943 57.895 0.00 0.00 0.00 3.58
4848 6288 4.504916 CCGACGCTGCAGGAGAGG 62.505 72.222 17.12 8.08 0.00 3.69
4850 6290 4.828925 GACGCTGCAGGAGAGGCC 62.829 72.222 17.12 0.00 0.00 5.19
4871 6311 4.002982 CCTTCGATGTTTTCATGTCCTCA 58.997 43.478 0.00 0.00 41.05 3.86
4881 6321 3.558314 ATGTCCTCATGATCCGGGA 57.442 52.632 0.00 0.00 32.51 5.14
4896 6336 1.066454 CCGGGAAATAATTTGGACGGC 59.934 52.381 0.00 0.00 33.25 5.68
4912 6352 3.267860 GCTGATCGCCTCGCCAAG 61.268 66.667 0.00 0.00 0.00 3.61
4913 6353 3.267860 CTGATCGCCTCGCCAAGC 61.268 66.667 0.00 0.00 0.00 4.01
4924 6364 2.592308 GCCAAGCGGAATCCTCCT 59.408 61.111 0.00 0.00 39.93 3.69
4925 6365 1.524849 GCCAAGCGGAATCCTCCTC 60.525 63.158 0.00 0.00 39.93 3.71
4926 6366 1.907739 CCAAGCGGAATCCTCCTCA 59.092 57.895 0.00 0.00 39.93 3.86
4927 6367 0.462759 CCAAGCGGAATCCTCCTCAC 60.463 60.000 0.00 0.00 39.93 3.51
4928 6368 0.250234 CAAGCGGAATCCTCCTCACA 59.750 55.000 0.00 0.00 39.93 3.58
4929 6369 0.984230 AAGCGGAATCCTCCTCACAA 59.016 50.000 0.00 0.00 39.93 3.33
4932 6372 0.613260 CGGAATCCTCCTCACAACCA 59.387 55.000 0.00 0.00 39.93 3.67
4933 6373 1.676014 CGGAATCCTCCTCACAACCAC 60.676 57.143 0.00 0.00 39.93 4.16
4934 6374 1.351017 GGAATCCTCCTCACAACCACA 59.649 52.381 0.00 0.00 38.88 4.17
4935 6375 2.224769 GGAATCCTCCTCACAACCACAA 60.225 50.000 0.00 0.00 38.88 3.33
4936 6376 3.486383 GAATCCTCCTCACAACCACAAA 58.514 45.455 0.00 0.00 0.00 2.83
4937 6377 3.814504 ATCCTCCTCACAACCACAAAT 57.185 42.857 0.00 0.00 0.00 2.32
4938 6378 2.862541 TCCTCCTCACAACCACAAATG 58.137 47.619 0.00 0.00 0.00 2.32
4939 6379 1.270550 CCTCCTCACAACCACAAATGC 59.729 52.381 0.00 0.00 0.00 3.56
4940 6380 0.950836 TCCTCACAACCACAAATGCG 59.049 50.000 0.00 0.00 0.00 4.73
4941 6381 0.667993 CCTCACAACCACAAATGCGT 59.332 50.000 0.00 0.00 0.00 5.24
4942 6382 1.876799 CCTCACAACCACAAATGCGTA 59.123 47.619 0.00 0.00 0.00 4.42
4943 6383 2.487762 CCTCACAACCACAAATGCGTAT 59.512 45.455 0.00 0.00 0.00 3.06
4944 6384 3.057596 CCTCACAACCACAAATGCGTATT 60.058 43.478 0.00 0.00 0.00 1.89
4945 6385 4.155099 CCTCACAACCACAAATGCGTATTA 59.845 41.667 0.00 0.00 0.00 0.98
4946 6386 5.289917 TCACAACCACAAATGCGTATTAG 57.710 39.130 0.00 0.00 0.00 1.73
4947 6387 4.155099 TCACAACCACAAATGCGTATTAGG 59.845 41.667 0.00 5.08 0.00 2.69
4948 6388 4.076394 ACAACCACAAATGCGTATTAGGT 58.924 39.130 10.63 10.63 31.42 3.08
4949 6389 4.521256 ACAACCACAAATGCGTATTAGGTT 59.479 37.500 18.29 18.29 36.93 3.50
4950 6390 5.010213 ACAACCACAAATGCGTATTAGGTTT 59.990 36.000 20.18 12.94 35.58 3.27
4951 6391 5.715434 ACCACAAATGCGTATTAGGTTTT 57.285 34.783 10.63 0.00 0.00 2.43
4952 6392 5.705902 ACCACAAATGCGTATTAGGTTTTC 58.294 37.500 10.63 0.00 0.00 2.29
4953 6393 5.099575 CCACAAATGCGTATTAGGTTTTCC 58.900 41.667 0.00 0.00 41.05 3.13
4964 6404 3.116110 GGTTTTCCTCCCCTACCCT 57.884 57.895 0.00 0.00 36.94 4.34
4965 6405 1.379776 GGTTTTCCTCCCCTACCCTT 58.620 55.000 0.00 0.00 36.94 3.95
4966 6406 1.714787 GGTTTTCCTCCCCTACCCTTT 59.285 52.381 0.00 0.00 36.94 3.11
4967 6407 2.556782 GGTTTTCCTCCCCTACCCTTTG 60.557 54.545 0.00 0.00 36.94 2.77
4968 6408 2.377531 GTTTTCCTCCCCTACCCTTTGA 59.622 50.000 0.00 0.00 0.00 2.69
4969 6409 2.680439 TTCCTCCCCTACCCTTTGAT 57.320 50.000 0.00 0.00 0.00 2.57
4970 6410 1.893315 TCCTCCCCTACCCTTTGATG 58.107 55.000 0.00 0.00 0.00 3.07
4971 6411 0.846693 CCTCCCCTACCCTTTGATGG 59.153 60.000 0.00 0.00 0.00 3.51
4972 6412 0.183731 CTCCCCTACCCTTTGATGGC 59.816 60.000 0.00 0.00 0.00 4.40
4973 6413 1.230212 CCCCTACCCTTTGATGGCC 59.770 63.158 0.00 0.00 0.00 5.36
4974 6414 1.580066 CCCCTACCCTTTGATGGCCA 61.580 60.000 8.56 8.56 0.00 5.36
4975 6415 0.106519 CCCTACCCTTTGATGGCCAG 60.107 60.000 13.05 0.00 0.00 4.85
4976 6416 0.106519 CCTACCCTTTGATGGCCAGG 60.107 60.000 13.05 8.44 0.00 4.45
4978 6418 2.761213 CCCTTTGATGGCCAGGGC 60.761 66.667 13.05 5.91 41.11 5.19
4979 6419 2.037687 CCTTTGATGGCCAGGGCA 59.962 61.111 19.93 19.93 44.11 5.36
4980 6420 2.056223 CCTTTGATGGCCAGGGCAG 61.056 63.158 22.19 7.04 42.43 4.85
4981 6421 1.000521 CTTTGATGGCCAGGGCAGA 60.001 57.895 22.19 7.66 42.43 4.26
4982 6422 1.304381 TTTGATGGCCAGGGCAGAC 60.304 57.895 22.19 17.34 42.43 3.51
4983 6423 1.792757 TTTGATGGCCAGGGCAGACT 61.793 55.000 22.19 4.31 42.43 3.24
4984 6424 2.191641 GATGGCCAGGGCAGACTC 59.808 66.667 22.19 10.58 42.43 3.36
4985 6425 2.285969 ATGGCCAGGGCAGACTCT 60.286 61.111 22.19 0.29 42.43 3.24
4986 6426 2.322638 GATGGCCAGGGCAGACTCTC 62.323 65.000 22.19 9.81 42.43 3.20
4987 6427 3.791586 GGCCAGGGCAGACTCTCC 61.792 72.222 13.10 0.00 44.11 3.71
4988 6428 3.791586 GCCAGGGCAGACTCTCCC 61.792 72.222 5.20 1.73 42.94 4.30
4993 6433 3.617535 GGGCAGACTCTCCCTTCTA 57.382 57.895 2.65 0.00 39.46 2.10
5004 6444 4.658901 ACTCTCCCTTCTAAACTTCACCAA 59.341 41.667 0.00 0.00 0.00 3.67
5010 6450 4.761739 CCTTCTAAACTTCACCAATGAGCA 59.238 41.667 0.00 0.00 35.83 4.26
5023 6463 3.021695 CAATGAGCATGTGGATTCACCT 58.978 45.455 0.46 0.00 42.98 4.00
5030 6470 0.119155 TGTGGATTCACCTCCCCTCT 59.881 55.000 0.46 0.00 42.98 3.69
5031 6471 0.543749 GTGGATTCACCTCCCCTCTG 59.456 60.000 0.00 0.00 37.92 3.35
5032 6472 1.274703 TGGATTCACCTCCCCTCTGC 61.275 60.000 0.00 0.00 39.86 4.26
5033 6473 1.529309 GATTCACCTCCCCTCTGCC 59.471 63.158 0.00 0.00 0.00 4.85
5034 6474 0.985490 GATTCACCTCCCCTCTGCCT 60.985 60.000 0.00 0.00 0.00 4.75
5035 6475 1.277580 ATTCACCTCCCCTCTGCCTG 61.278 60.000 0.00 0.00 0.00 4.85
5036 6476 2.284921 CACCTCCCCTCTGCCTGA 60.285 66.667 0.00 0.00 0.00 3.86
5037 6477 1.692042 CACCTCCCCTCTGCCTGAT 60.692 63.158 0.00 0.00 0.00 2.90
5038 6478 1.083706 ACCTCCCCTCTGCCTGATT 59.916 57.895 0.00 0.00 0.00 2.57
5039 6479 1.277580 ACCTCCCCTCTGCCTGATTG 61.278 60.000 0.00 0.00 0.00 2.67
5040 6480 1.277580 CCTCCCCTCTGCCTGATTGT 61.278 60.000 0.00 0.00 0.00 2.71
5041 6481 1.500474 CTCCCCTCTGCCTGATTGTA 58.500 55.000 0.00 0.00 0.00 2.41
5042 6482 1.415659 CTCCCCTCTGCCTGATTGTAG 59.584 57.143 0.00 0.00 0.00 2.74
5043 6483 0.179034 CCCCTCTGCCTGATTGTAGC 60.179 60.000 0.00 0.00 0.00 3.58
5044 6484 0.531532 CCCTCTGCCTGATTGTAGCG 60.532 60.000 0.00 0.00 0.00 4.26
5045 6485 0.531532 CCTCTGCCTGATTGTAGCGG 60.532 60.000 0.00 0.00 0.00 5.52
5113 6558 2.922740 TTTTTACTCCTCGCAGGTGT 57.077 45.000 12.43 12.43 43.74 4.16
5114 6559 2.163818 TTTTACTCCTCGCAGGTGTG 57.836 50.000 15.67 5.95 41.70 3.82
5164 6611 5.993748 TTTCAAGTTTGTCTTCTGGGTTT 57.006 34.783 0.00 0.00 33.63 3.27
5165 6612 4.981806 TCAAGTTTGTCTTCTGGGTTTG 57.018 40.909 0.00 0.00 33.63 2.93
5175 6623 3.055819 TCTTCTGGGTTTGATCCTTCTCG 60.056 47.826 0.00 0.00 0.00 4.04
5187 6635 2.168496 TCCTTCTCGAGTTCGTCCATT 58.832 47.619 13.13 0.00 40.80 3.16
5212 6660 0.523757 GTACTCGACGAAGCTCCAGC 60.524 60.000 0.00 0.00 42.49 4.85
5213 6661 0.958876 TACTCGACGAAGCTCCAGCA 60.959 55.000 0.00 0.00 45.16 4.41
5214 6662 1.140589 CTCGACGAAGCTCCAGCAT 59.859 57.895 0.00 0.00 45.16 3.79
5219 6667 2.544694 CGACGAAGCTCCAGCATAGATT 60.545 50.000 0.48 0.00 45.16 2.40
5234 6682 7.172875 CCAGCATAGATTCTGGTTATCTTCTTG 59.827 40.741 0.46 0.00 43.66 3.02
5236 6684 7.071698 AGCATAGATTCTGGTTATCTTCTTGGA 59.928 37.037 0.00 0.00 34.35 3.53
5252 6700 1.988406 GGAGCGGTGAGGTTAGGGT 60.988 63.158 0.00 0.00 0.00 4.34
5268 6716 2.397597 AGGGTTTTTCATTGTGTGGCT 58.602 42.857 0.00 0.00 0.00 4.75
5280 6728 5.355071 TCATTGTGTGGCTAGATTTGATGTC 59.645 40.000 0.00 0.00 0.00 3.06
5297 6745 5.748402 TGATGTCAGGTGCTTCTGATTTAT 58.252 37.500 11.55 7.83 44.43 1.40
5298 6746 6.182627 TGATGTCAGGTGCTTCTGATTTATT 58.817 36.000 11.55 0.00 44.43 1.40
5299 6747 6.317140 TGATGTCAGGTGCTTCTGATTTATTC 59.683 38.462 11.55 6.66 44.43 1.75
5300 6748 5.559770 TGTCAGGTGCTTCTGATTTATTCA 58.440 37.500 11.55 3.31 44.43 2.57
5301 6749 6.003326 TGTCAGGTGCTTCTGATTTATTCAA 58.997 36.000 11.55 0.00 44.43 2.69
5302 6750 6.149973 TGTCAGGTGCTTCTGATTTATTCAAG 59.850 38.462 11.55 0.00 44.43 3.02
5303 6751 6.372659 GTCAGGTGCTTCTGATTTATTCAAGA 59.627 38.462 11.55 0.00 44.43 3.02
5304 6752 6.596888 TCAGGTGCTTCTGATTTATTCAAGAG 59.403 38.462 5.65 0.00 38.70 2.85
5330 6778 4.129737 CGACGACTGCGACCCCAT 62.130 66.667 0.00 0.00 41.64 4.00
5366 6814 1.133790 GGGCATGTGCATGAAGACTTC 59.866 52.381 15.53 8.34 44.36 3.01
5383 6831 5.178797 AGACTTCCGGTTGTCATCAATAAG 58.821 41.667 23.66 10.00 35.92 1.73
5391 6839 4.142381 GGTTGTCATCAATAAGGTCAAGCC 60.142 45.833 0.00 0.00 35.92 4.35
5398 6846 2.932614 CAATAAGGTCAAGCCGACTCTG 59.067 50.000 4.07 0.00 44.70 3.35
5433 6881 1.498865 AACAGTGCTTTGACGGCTCG 61.499 55.000 0.00 0.00 0.00 5.03
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 4.127744 ATGGGGTCCACATGGCCG 62.128 66.667 5.58 0.00 35.80 6.13
4 5 1.454479 CAGATGGGGTCCACATGGC 60.454 63.158 12.64 0.00 35.80 4.40
5 6 0.107017 GACAGATGGGGTCCACATGG 60.107 60.000 12.64 6.07 35.80 3.66
6 7 3.483954 GACAGATGGGGTCCACATG 57.516 57.895 12.64 1.55 35.80 3.21
12 13 2.253403 GAACCGGGACAGATGGGGTC 62.253 65.000 6.32 0.00 34.52 4.46
13 14 2.204090 AACCGGGACAGATGGGGT 60.204 61.111 6.32 0.00 0.00 4.95
14 15 2.590092 GAACCGGGACAGATGGGG 59.410 66.667 6.32 0.00 0.00 4.96
15 16 1.324740 TACGAACCGGGACAGATGGG 61.325 60.000 6.32 0.00 0.00 4.00
16 17 0.102481 CTACGAACCGGGACAGATGG 59.898 60.000 6.32 0.00 0.00 3.51
17 18 0.102481 CCTACGAACCGGGACAGATG 59.898 60.000 6.32 0.00 0.00 2.90
18 19 1.673808 GCCTACGAACCGGGACAGAT 61.674 60.000 6.32 0.00 0.00 2.90
19 20 2.345760 GCCTACGAACCGGGACAGA 61.346 63.158 6.32 0.00 0.00 3.41
20 21 2.183555 GCCTACGAACCGGGACAG 59.816 66.667 6.32 0.00 0.00 3.51
21 22 3.751246 CGCCTACGAACCGGGACA 61.751 66.667 6.32 0.00 43.93 4.02
31 32 1.656818 TTAGTCCCGGTTCGCCTACG 61.657 60.000 0.00 0.00 42.01 3.51
32 33 0.532115 TTTAGTCCCGGTTCGCCTAC 59.468 55.000 0.00 0.00 34.30 3.18
33 34 0.819582 CTTTAGTCCCGGTTCGCCTA 59.180 55.000 0.00 0.00 34.30 3.93
34 35 1.595357 CTTTAGTCCCGGTTCGCCT 59.405 57.895 0.00 0.00 34.30 5.52
35 36 1.449070 CCTTTAGTCCCGGTTCGCC 60.449 63.158 0.00 0.00 0.00 5.54
36 37 0.532115 TACCTTTAGTCCCGGTTCGC 59.468 55.000 0.00 0.00 32.36 4.70
37 38 3.192466 CAATACCTTTAGTCCCGGTTCG 58.808 50.000 0.00 0.00 32.36 3.95
38 39 3.538591 CCAATACCTTTAGTCCCGGTTC 58.461 50.000 0.00 0.00 32.36 3.62
39 40 2.240414 CCCAATACCTTTAGTCCCGGTT 59.760 50.000 0.00 0.00 32.36 4.44
40 41 1.841919 CCCAATACCTTTAGTCCCGGT 59.158 52.381 0.00 0.00 34.86 5.28
41 42 1.476291 GCCCAATACCTTTAGTCCCGG 60.476 57.143 0.00 0.00 0.00 5.73
42 43 1.489230 AGCCCAATACCTTTAGTCCCG 59.511 52.381 0.00 0.00 0.00 5.14
43 44 3.664551 AAGCCCAATACCTTTAGTCCC 57.335 47.619 0.00 0.00 0.00 4.46
48 49 5.424895 TCGGTACTAAAGCCCAATACCTTTA 59.575 40.000 0.00 0.00 34.34 1.85
49 50 4.225717 TCGGTACTAAAGCCCAATACCTTT 59.774 41.667 0.00 0.00 34.34 3.11
50 51 3.776417 TCGGTACTAAAGCCCAATACCTT 59.224 43.478 0.00 0.00 34.34 3.50
51 52 3.133542 GTCGGTACTAAAGCCCAATACCT 59.866 47.826 0.00 0.00 34.34 3.08
52 53 3.461061 GTCGGTACTAAAGCCCAATACC 58.539 50.000 0.00 0.00 33.35 2.73
53 54 3.461061 GGTCGGTACTAAAGCCCAATAC 58.539 50.000 0.00 0.00 0.00 1.89
54 55 2.435437 GGGTCGGTACTAAAGCCCAATA 59.565 50.000 0.00 0.00 36.25 1.90
55 56 1.211212 GGGTCGGTACTAAAGCCCAAT 59.789 52.381 0.00 0.00 36.25 3.16
56 57 0.614812 GGGTCGGTACTAAAGCCCAA 59.385 55.000 0.00 0.00 36.25 4.12
57 58 0.252375 AGGGTCGGTACTAAAGCCCA 60.252 55.000 11.78 0.00 38.56 5.36
58 59 0.907486 AAGGGTCGGTACTAAAGCCC 59.093 55.000 0.00 0.00 36.46 5.19
59 60 2.775911 AAAGGGTCGGTACTAAAGCC 57.224 50.000 0.00 0.00 0.00 4.35
60 61 4.428209 GACTAAAGGGTCGGTACTAAAGC 58.572 47.826 0.00 0.00 0.00 3.51
61 62 4.142071 GGGACTAAAGGGTCGGTACTAAAG 60.142 50.000 0.00 0.00 37.12 1.85
62 63 3.769300 GGGACTAAAGGGTCGGTACTAAA 59.231 47.826 0.00 0.00 37.12 1.85
63 64 3.365472 GGGACTAAAGGGTCGGTACTAA 58.635 50.000 0.00 0.00 37.12 2.24
64 65 2.683742 CGGGACTAAAGGGTCGGTACTA 60.684 54.545 0.00 0.00 37.12 1.82
65 66 1.857965 GGGACTAAAGGGTCGGTACT 58.142 55.000 0.00 0.00 37.12 2.73
66 67 0.457443 CGGGACTAAAGGGTCGGTAC 59.543 60.000 0.00 0.00 37.12 3.34
67 68 0.684153 CCGGGACTAAAGGGTCGGTA 60.684 60.000 0.00 0.00 37.12 4.02
68 69 1.986210 CCGGGACTAAAGGGTCGGT 60.986 63.158 0.00 0.00 37.12 4.69
69 70 1.547472 AACCGGGACTAAAGGGTCGG 61.547 60.000 6.32 0.00 42.69 4.79
70 71 0.108472 GAACCGGGACTAAAGGGTCG 60.108 60.000 6.32 0.00 37.12 4.79
71 72 0.251354 GGAACCGGGACTAAAGGGTC 59.749 60.000 6.32 0.00 40.88 4.46
72 73 1.547472 CGGAACCGGGACTAAAGGGT 61.547 60.000 6.32 0.00 35.56 4.34
73 74 1.219935 CGGAACCGGGACTAAAGGG 59.780 63.158 6.32 0.00 35.56 3.95
74 75 4.926207 CGGAACCGGGACTAAAGG 57.074 61.111 6.32 0.00 35.56 3.11
90 91 2.043980 CCCATTTGTCCCGGTTCCG 61.044 63.158 0.00 4.08 0.00 4.30
91 92 2.348104 GCCCATTTGTCCCGGTTCC 61.348 63.158 0.00 0.00 0.00 3.62
92 93 2.348104 GGCCCATTTGTCCCGGTTC 61.348 63.158 0.00 0.00 0.00 3.62
93 94 2.283604 GGCCCATTTGTCCCGGTT 60.284 61.111 0.00 0.00 0.00 4.44
94 95 1.502527 TAAGGCCCATTTGTCCCGGT 61.503 55.000 0.00 0.00 0.00 5.28
95 96 0.106217 ATAAGGCCCATTTGTCCCGG 60.106 55.000 0.00 0.00 0.00 5.73
96 97 1.032014 CATAAGGCCCATTTGTCCCG 58.968 55.000 0.00 0.00 0.00 5.14
97 98 2.430694 GTTCATAAGGCCCATTTGTCCC 59.569 50.000 0.00 0.00 0.00 4.46
98 99 2.430694 GGTTCATAAGGCCCATTTGTCC 59.569 50.000 0.00 0.00 0.00 4.02
99 100 2.099098 CGGTTCATAAGGCCCATTTGTC 59.901 50.000 0.00 0.00 0.00 3.18
100 101 2.099405 CGGTTCATAAGGCCCATTTGT 58.901 47.619 0.00 0.00 0.00 2.83
101 102 1.408702 CCGGTTCATAAGGCCCATTTG 59.591 52.381 0.00 0.00 0.00 2.32
102 103 1.687996 CCCGGTTCATAAGGCCCATTT 60.688 52.381 0.00 0.00 0.00 2.32
103 104 0.106217 CCCGGTTCATAAGGCCCATT 60.106 55.000 0.00 0.00 0.00 3.16
104 105 0.991355 TCCCGGTTCATAAGGCCCAT 60.991 55.000 0.00 0.00 0.00 4.00
105 106 1.616930 TCCCGGTTCATAAGGCCCA 60.617 57.895 0.00 0.00 0.00 5.36
106 107 1.153025 GTCCCGGTTCATAAGGCCC 60.153 63.158 0.00 0.00 0.00 5.80
107 108 0.034863 TTGTCCCGGTTCATAAGGCC 60.035 55.000 0.00 0.00 0.00 5.19
108 109 1.828979 TTTGTCCCGGTTCATAAGGC 58.171 50.000 0.00 0.00 0.00 4.35
109 110 2.687935 CCATTTGTCCCGGTTCATAAGG 59.312 50.000 0.00 0.00 0.00 2.69
110 111 2.687935 CCCATTTGTCCCGGTTCATAAG 59.312 50.000 0.00 0.00 0.00 1.73
111 112 2.729194 CCCATTTGTCCCGGTTCATAA 58.271 47.619 0.00 0.00 0.00 1.90
112 113 1.683629 GCCCATTTGTCCCGGTTCATA 60.684 52.381 0.00 0.00 0.00 2.15
113 114 0.970427 GCCCATTTGTCCCGGTTCAT 60.970 55.000 0.00 0.00 0.00 2.57
114 115 1.605165 GCCCATTTGTCCCGGTTCA 60.605 57.895 0.00 0.00 0.00 3.18
115 116 2.348104 GGCCCATTTGTCCCGGTTC 61.348 63.158 0.00 0.00 0.00 3.62
116 117 2.283604 GGCCCATTTGTCCCGGTT 60.284 61.111 0.00 0.00 0.00 4.44
117 118 2.380571 AAAGGCCCATTTGTCCCGGT 62.381 55.000 0.00 0.00 0.00 5.28
118 119 1.191489 AAAAGGCCCATTTGTCCCGG 61.191 55.000 0.00 0.00 0.00 5.73
119 120 0.684535 AAAAAGGCCCATTTGTCCCG 59.315 50.000 0.00 0.00 0.00 5.14
120 121 1.977854 AGAAAAAGGCCCATTTGTCCC 59.022 47.619 8.01 0.00 28.13 4.46
121 122 3.832490 AGTAGAAAAAGGCCCATTTGTCC 59.168 43.478 8.01 0.00 28.13 4.02
122 123 5.710567 ACTAGTAGAAAAAGGCCCATTTGTC 59.289 40.000 8.01 4.02 0.00 3.18
123 124 5.476945 CACTAGTAGAAAAAGGCCCATTTGT 59.523 40.000 8.01 6.88 0.00 2.83
124 125 5.622233 GCACTAGTAGAAAAAGGCCCATTTG 60.622 44.000 8.01 0.00 0.00 2.32
125 126 4.462834 GCACTAGTAGAAAAAGGCCCATTT 59.537 41.667 3.59 0.00 0.00 2.32
126 127 4.017126 GCACTAGTAGAAAAAGGCCCATT 58.983 43.478 3.59 0.00 0.00 3.16
127 128 3.010138 TGCACTAGTAGAAAAAGGCCCAT 59.990 43.478 3.59 0.00 0.00 4.00
128 129 2.373836 TGCACTAGTAGAAAAAGGCCCA 59.626 45.455 3.59 0.00 0.00 5.36
129 130 3.067684 TGCACTAGTAGAAAAAGGCCC 57.932 47.619 3.59 0.00 0.00 5.80
130 131 3.818773 TGTTGCACTAGTAGAAAAAGGCC 59.181 43.478 3.59 0.00 0.00 5.19
131 132 5.181245 TCATGTTGCACTAGTAGAAAAAGGC 59.819 40.000 3.59 0.00 0.00 4.35
132 133 6.801539 TCATGTTGCACTAGTAGAAAAAGG 57.198 37.500 3.59 0.00 0.00 3.11
133 134 8.032952 TGATCATGTTGCACTAGTAGAAAAAG 57.967 34.615 3.59 0.00 0.00 2.27
134 135 7.977789 TGATCATGTTGCACTAGTAGAAAAA 57.022 32.000 3.59 0.00 0.00 1.94
135 136 7.977789 TTGATCATGTTGCACTAGTAGAAAA 57.022 32.000 3.59 0.00 0.00 2.29
136 137 7.661437 AGTTTGATCATGTTGCACTAGTAGAAA 59.339 33.333 3.59 0.00 0.00 2.52
137 138 7.118245 CAGTTTGATCATGTTGCACTAGTAGAA 59.882 37.037 3.59 0.00 0.00 2.10
138 139 6.591448 CAGTTTGATCATGTTGCACTAGTAGA 59.409 38.462 3.59 0.00 0.00 2.59
139 140 6.183360 CCAGTTTGATCATGTTGCACTAGTAG 60.183 42.308 0.00 0.00 0.00 2.57
140 141 5.643348 CCAGTTTGATCATGTTGCACTAGTA 59.357 40.000 0.00 0.00 0.00 1.82
141 142 4.456911 CCAGTTTGATCATGTTGCACTAGT 59.543 41.667 0.00 0.00 0.00 2.57
142 143 4.696877 TCCAGTTTGATCATGTTGCACTAG 59.303 41.667 0.00 0.00 0.00 2.57
143 144 4.455533 GTCCAGTTTGATCATGTTGCACTA 59.544 41.667 0.00 0.00 0.00 2.74
144 145 3.254166 GTCCAGTTTGATCATGTTGCACT 59.746 43.478 0.00 0.00 0.00 4.40
145 146 3.568538 GTCCAGTTTGATCATGTTGCAC 58.431 45.455 0.00 0.00 0.00 4.57
146 147 2.557924 GGTCCAGTTTGATCATGTTGCA 59.442 45.455 0.00 0.00 0.00 4.08
147 148 2.414559 CGGTCCAGTTTGATCATGTTGC 60.415 50.000 0.00 0.00 0.00 4.17
166 167 2.672961 TGACAAGGATGCTACTTCGG 57.327 50.000 0.00 0.00 0.00 4.30
193 194 4.276058 ACTTGGGGAAAATTGATTGCAG 57.724 40.909 0.00 0.00 0.00 4.41
200 201 7.839907 TCAAAGATGATACTTGGGGAAAATTG 58.160 34.615 0.00 0.00 0.00 2.32
202 203 7.413446 TCTCAAAGATGATACTTGGGGAAAAT 58.587 34.615 0.00 0.00 34.37 1.82
234 235 1.202663 GGCTAGGGTTTCGAATCTCCC 60.203 57.143 19.43 19.43 40.16 4.30
281 282 4.157246 AGGACGGTATAAGGCATGATGTA 58.843 43.478 0.00 0.00 0.00 2.29
286 287 3.469008 TTGAGGACGGTATAAGGCATG 57.531 47.619 0.00 0.00 0.00 4.06
288 289 3.985019 TTTTGAGGACGGTATAAGGCA 57.015 42.857 0.00 0.00 0.00 4.75
303 304 4.464244 TGTTGTGGTCTTGGTTGATTTTGA 59.536 37.500 0.00 0.00 0.00 2.69
304 305 4.753233 TGTTGTGGTCTTGGTTGATTTTG 58.247 39.130 0.00 0.00 0.00 2.44
305 306 5.612725 ATGTTGTGGTCTTGGTTGATTTT 57.387 34.783 0.00 0.00 0.00 1.82
307 308 4.895297 AGAATGTTGTGGTCTTGGTTGATT 59.105 37.500 0.00 0.00 0.00 2.57
309 310 3.897239 AGAATGTTGTGGTCTTGGTTGA 58.103 40.909 0.00 0.00 0.00 3.18
310 311 4.362279 CAAGAATGTTGTGGTCTTGGTTG 58.638 43.478 5.00 0.00 42.91 3.77
311 312 3.181476 GCAAGAATGTTGTGGTCTTGGTT 60.181 43.478 12.99 0.00 45.46 3.67
313 314 2.624838 AGCAAGAATGTTGTGGTCTTGG 59.375 45.455 12.99 0.00 45.46 3.61
315 316 3.554934 TGAGCAAGAATGTTGTGGTCTT 58.445 40.909 0.00 0.00 39.82 3.01
316 317 3.213206 TGAGCAAGAATGTTGTGGTCT 57.787 42.857 0.00 0.00 39.82 3.85
318 319 4.142315 GCATATGAGCAAGAATGTTGTGGT 60.142 41.667 6.97 0.00 0.00 4.16
319 320 4.357142 GCATATGAGCAAGAATGTTGTGG 58.643 43.478 6.97 0.00 0.00 4.17
320 321 4.142337 TGGCATATGAGCAAGAATGTTGTG 60.142 41.667 6.97 0.00 35.83 3.33
321 322 4.018490 TGGCATATGAGCAAGAATGTTGT 58.982 39.130 6.97 0.00 35.83 3.32
322 323 4.357142 GTGGCATATGAGCAAGAATGTTG 58.643 43.478 6.97 0.00 35.83 3.33
323 324 3.065786 CGTGGCATATGAGCAAGAATGTT 59.934 43.478 6.97 0.00 35.83 2.71
324 325 2.615447 CGTGGCATATGAGCAAGAATGT 59.385 45.455 6.97 0.00 35.83 2.71
325 326 2.031420 CCGTGGCATATGAGCAAGAATG 60.031 50.000 6.97 0.00 35.83 2.67
326 327 2.224606 CCGTGGCATATGAGCAAGAAT 58.775 47.619 6.97 0.00 35.83 2.40
327 328 1.065491 ACCGTGGCATATGAGCAAGAA 60.065 47.619 6.97 0.00 35.83 2.52
328 329 0.541392 ACCGTGGCATATGAGCAAGA 59.459 50.000 6.97 0.00 35.83 3.02
329 330 0.659427 CACCGTGGCATATGAGCAAG 59.341 55.000 6.97 0.00 35.83 4.01
330 331 0.251634 TCACCGTGGCATATGAGCAA 59.748 50.000 6.97 0.00 35.83 3.91
331 332 0.251634 TTCACCGTGGCATATGAGCA 59.748 50.000 6.97 0.00 35.83 4.26
332 333 0.657840 GTTCACCGTGGCATATGAGC 59.342 55.000 6.97 0.00 0.00 4.26
333 334 1.299541 GGTTCACCGTGGCATATGAG 58.700 55.000 6.97 0.00 0.00 2.90
334 335 0.615850 TGGTTCACCGTGGCATATGA 59.384 50.000 6.97 0.00 39.43 2.15
335 336 1.132262 GTTGGTTCACCGTGGCATATG 59.868 52.381 0.00 0.00 39.43 1.78
336 337 1.004277 AGTTGGTTCACCGTGGCATAT 59.996 47.619 0.00 0.00 39.43 1.78
337 338 0.398696 AGTTGGTTCACCGTGGCATA 59.601 50.000 0.00 0.00 39.43 3.14
338 339 0.889186 GAGTTGGTTCACCGTGGCAT 60.889 55.000 0.00 0.00 39.43 4.40
339 340 1.525077 GAGTTGGTTCACCGTGGCA 60.525 57.895 0.00 0.00 39.43 4.92
340 341 2.604174 CGAGTTGGTTCACCGTGGC 61.604 63.158 0.00 0.00 39.43 5.01
341 342 1.959226 CCGAGTTGGTTCACCGTGG 60.959 63.158 0.00 0.00 39.43 4.94
342 343 0.320421 ATCCGAGTTGGTTCACCGTG 60.320 55.000 0.00 0.00 39.43 4.94
343 344 0.395312 AATCCGAGTTGGTTCACCGT 59.605 50.000 0.00 0.00 39.43 4.83
344 345 1.076332 GAATCCGAGTTGGTTCACCG 58.924 55.000 0.00 0.00 39.43 4.94
345 346 2.474410 AGAATCCGAGTTGGTTCACC 57.526 50.000 11.87 0.00 39.52 4.02
346 347 4.567159 GTGATAGAATCCGAGTTGGTTCAC 59.433 45.833 11.87 6.90 39.52 3.18
347 348 4.676986 CGTGATAGAATCCGAGTTGGTTCA 60.677 45.833 11.87 0.28 39.52 3.18
348 349 3.797256 CGTGATAGAATCCGAGTTGGTTC 59.203 47.826 0.00 0.43 39.52 3.62
349 350 3.446161 TCGTGATAGAATCCGAGTTGGTT 59.554 43.478 0.00 0.00 39.52 3.67
350 351 3.021695 TCGTGATAGAATCCGAGTTGGT 58.978 45.455 0.00 0.00 39.52 3.67
351 352 3.710326 TCGTGATAGAATCCGAGTTGG 57.290 47.619 0.00 0.00 40.09 3.77
352 353 5.114785 AGATCGTGATAGAATCCGAGTTG 57.885 43.478 0.00 0.00 36.15 3.16
353 354 4.083749 CGAGATCGTGATAGAATCCGAGTT 60.084 45.833 0.00 0.00 36.15 3.01
354 355 3.433957 CGAGATCGTGATAGAATCCGAGT 59.566 47.826 0.00 0.00 36.15 4.18
355 356 3.726486 GCGAGATCGTGATAGAATCCGAG 60.726 52.174 3.94 0.00 42.22 4.63
356 357 2.159824 GCGAGATCGTGATAGAATCCGA 59.840 50.000 3.94 0.00 42.22 4.55
357 358 2.160615 AGCGAGATCGTGATAGAATCCG 59.839 50.000 3.94 0.00 42.22 4.18
358 359 3.057876 ACAGCGAGATCGTGATAGAATCC 60.058 47.826 3.94 0.00 42.22 3.01
359 360 3.911365 CACAGCGAGATCGTGATAGAATC 59.089 47.826 3.94 0.00 42.22 2.52
360 361 3.565902 TCACAGCGAGATCGTGATAGAAT 59.434 43.478 3.94 0.00 42.22 2.40
361 362 2.943033 TCACAGCGAGATCGTGATAGAA 59.057 45.455 3.94 0.00 42.22 2.10
362 363 2.561569 TCACAGCGAGATCGTGATAGA 58.438 47.619 3.94 1.46 42.22 1.98
363 364 3.550950 ATCACAGCGAGATCGTGATAG 57.449 47.619 10.38 0.00 45.97 2.08
366 367 0.382158 GGATCACAGCGAGATCGTGA 59.618 55.000 3.94 3.33 42.16 4.35
367 368 0.101219 TGGATCACAGCGAGATCGTG 59.899 55.000 3.94 4.06 42.16 4.35
368 369 0.817654 TTGGATCACAGCGAGATCGT 59.182 50.000 3.94 0.00 42.16 3.73
369 370 1.590238 GTTTGGATCACAGCGAGATCG 59.410 52.381 0.00 0.00 42.16 3.69
370 371 2.863137 GAGTTTGGATCACAGCGAGATC 59.137 50.000 0.00 7.33 40.86 2.75
371 372 2.419297 GGAGTTTGGATCACAGCGAGAT 60.419 50.000 0.00 0.00 0.00 2.75
372 373 1.066858 GGAGTTTGGATCACAGCGAGA 60.067 52.381 0.00 0.00 0.00 4.04
373 374 1.363744 GGAGTTTGGATCACAGCGAG 58.636 55.000 0.00 0.00 0.00 5.03
374 375 0.036388 GGGAGTTTGGATCACAGCGA 60.036 55.000 0.00 0.00 0.00 4.93
375 376 1.026718 GGGGAGTTTGGATCACAGCG 61.027 60.000 0.00 0.00 0.00 5.18
376 377 0.681243 GGGGGAGTTTGGATCACAGC 60.681 60.000 0.00 0.00 0.00 4.40
377 378 0.698238 TGGGGGAGTTTGGATCACAG 59.302 55.000 0.00 0.00 0.00 3.66
378 379 0.404040 GTGGGGGAGTTTGGATCACA 59.596 55.000 0.00 0.00 0.00 3.58
379 380 0.404040 TGTGGGGGAGTTTGGATCAC 59.596 55.000 0.00 0.00 0.00 3.06
380 381 1.153539 TTGTGGGGGAGTTTGGATCA 58.846 50.000 0.00 0.00 0.00 2.92
381 382 2.302587 TTTGTGGGGGAGTTTGGATC 57.697 50.000 0.00 0.00 0.00 3.36
382 383 2.090775 ACTTTTGTGGGGGAGTTTGGAT 60.091 45.455 0.00 0.00 0.00 3.41
383 384 1.289530 ACTTTTGTGGGGGAGTTTGGA 59.710 47.619 0.00 0.00 0.00 3.53
384 385 1.412343 CACTTTTGTGGGGGAGTTTGG 59.588 52.381 0.00 0.00 46.16 3.28
385 386 2.888834 CACTTTTGTGGGGGAGTTTG 57.111 50.000 0.00 0.00 46.16 2.93
396 397 5.930837 TCAATGGGAGAAAACACTTTTGT 57.069 34.783 0.00 0.00 37.67 2.83
397 398 6.643770 CAGATCAATGGGAGAAAACACTTTTG 59.356 38.462 0.00 0.00 31.94 2.44
398 399 6.550854 TCAGATCAATGGGAGAAAACACTTTT 59.449 34.615 0.00 0.00 35.12 2.27
399 400 6.070656 TCAGATCAATGGGAGAAAACACTTT 58.929 36.000 0.00 0.00 0.00 2.66
400 401 5.634118 TCAGATCAATGGGAGAAAACACTT 58.366 37.500 0.00 0.00 0.00 3.16
401 402 5.246981 TCAGATCAATGGGAGAAAACACT 57.753 39.130 0.00 0.00 0.00 3.55
402 403 5.964958 TTCAGATCAATGGGAGAAAACAC 57.035 39.130 0.00 0.00 0.00 3.32
403 404 6.071221 CCAATTCAGATCAATGGGAGAAAACA 60.071 38.462 0.00 0.00 28.82 2.83
404 405 6.335777 CCAATTCAGATCAATGGGAGAAAAC 58.664 40.000 0.00 0.00 28.82 2.43
405 406 5.422970 CCCAATTCAGATCAATGGGAGAAAA 59.577 40.000 13.15 0.00 37.29 2.29
406 407 4.957954 CCCAATTCAGATCAATGGGAGAAA 59.042 41.667 13.15 0.00 37.29 2.52
407 408 4.539726 CCCAATTCAGATCAATGGGAGAA 58.460 43.478 13.15 0.00 37.29 2.87
408 409 3.117398 CCCCAATTCAGATCAATGGGAGA 60.117 47.826 17.75 0.00 37.29 3.71
409 410 3.228453 CCCCAATTCAGATCAATGGGAG 58.772 50.000 17.75 8.25 37.29 4.30
410 411 2.690632 GCCCCAATTCAGATCAATGGGA 60.691 50.000 17.75 0.00 37.29 4.37
411 412 1.690352 GCCCCAATTCAGATCAATGGG 59.310 52.381 12.01 12.01 35.02 4.00
412 413 1.690352 GGCCCCAATTCAGATCAATGG 59.310 52.381 0.00 0.00 0.00 3.16
413 414 1.690352 GGGCCCCAATTCAGATCAATG 59.310 52.381 12.23 0.00 0.00 2.82
414 415 1.413517 GGGGCCCCAATTCAGATCAAT 60.414 52.381 37.61 0.00 35.81 2.57
415 416 0.032217 GGGGCCCCAATTCAGATCAA 60.032 55.000 37.61 0.00 35.81 2.57
416 417 1.620259 GGGGCCCCAATTCAGATCA 59.380 57.895 37.61 0.00 35.81 2.92
417 418 1.529244 CGGGGCCCCAATTCAGATC 60.529 63.158 40.06 9.60 35.37 2.75
418 419 1.999634 CTCGGGGCCCCAATTCAGAT 62.000 60.000 40.06 0.00 35.37 2.90
452 453 2.960957 ATCGCCAGTGCCTTCGATCG 62.961 60.000 9.36 9.36 37.09 3.69
453 454 0.032130 TATCGCCAGTGCCTTCGATC 59.968 55.000 9.82 0.00 41.26 3.69
455 456 1.320344 ACTATCGCCAGTGCCTTCGA 61.320 55.000 0.00 0.00 35.34 3.71
457 458 1.398390 CAAACTATCGCCAGTGCCTTC 59.602 52.381 0.00 0.00 0.00 3.46
458 459 1.453155 CAAACTATCGCCAGTGCCTT 58.547 50.000 0.00 0.00 0.00 4.35
459 460 0.392998 CCAAACTATCGCCAGTGCCT 60.393 55.000 0.00 0.00 0.00 4.75
460 461 0.392461 TCCAAACTATCGCCAGTGCC 60.392 55.000 0.00 0.00 0.00 5.01
469 470 9.869844 CGAAATATCTTTCACATCCAAACTATC 57.130 33.333 4.66 0.00 40.72 2.08
504 505 2.512515 GGCTCTTGGCTGGTAGCG 60.513 66.667 0.00 0.00 43.62 4.26
505 506 1.746991 GTGGCTCTTGGCTGGTAGC 60.747 63.158 0.00 0.00 41.46 3.58
514 515 2.421619 GAGGTGAAGAAGTGGCTCTTG 58.578 52.381 6.53 0.00 35.76 3.02
534 535 2.834638 AATCAATGACAGGGAAGGGG 57.165 50.000 0.00 0.00 0.00 4.79
535 536 5.052693 TGATAATCAATGACAGGGAAGGG 57.947 43.478 0.00 0.00 0.00 3.95
544 545 4.310769 CGACTCCCCTGATAATCAATGAC 58.689 47.826 0.00 0.00 0.00 3.06
563 564 1.739338 ATCATGGACGAGGAGGCGAC 61.739 60.000 0.00 0.00 34.83 5.19
566 567 0.598680 CGAATCATGGACGAGGAGGC 60.599 60.000 0.00 0.00 0.00 4.70
585 586 1.153686 GAGGCGTCGGGGAAACTAC 60.154 63.158 0.00 0.00 0.00 2.73
592 593 4.148825 CTGGAAGAGGCGTCGGGG 62.149 72.222 0.00 0.00 34.07 5.73
594 595 4.821589 GGCTGGAAGAGGCGTCGG 62.822 72.222 0.00 0.00 37.53 4.79
638 639 0.832135 AAGCAGAAGGAGTCGGGTCA 60.832 55.000 0.00 0.00 30.36 4.02
649 651 1.339824 ACATCTGGAGGCAAGCAGAAG 60.340 52.381 0.00 0.00 0.00 2.85
696 698 7.094634 ACGAAGCAAAATGAATGAATCTACACT 60.095 33.333 0.00 0.00 0.00 3.55
698 700 7.144722 ACGAAGCAAAATGAATGAATCTACA 57.855 32.000 0.00 0.00 0.00 2.74
699 701 9.162793 CATACGAAGCAAAATGAATGAATCTAC 57.837 33.333 0.00 0.00 0.00 2.59
700 702 8.892723 ACATACGAAGCAAAATGAATGAATCTA 58.107 29.630 0.00 0.00 0.00 1.98
701 703 7.765307 ACATACGAAGCAAAATGAATGAATCT 58.235 30.769 0.00 0.00 0.00 2.40
702 704 7.975866 ACATACGAAGCAAAATGAATGAATC 57.024 32.000 0.00 0.00 0.00 2.52
705 707 9.502145 GAATTACATACGAAGCAAAATGAATGA 57.498 29.630 0.00 0.00 0.00 2.57
706 708 9.288124 TGAATTACATACGAAGCAAAATGAATG 57.712 29.630 0.00 0.00 0.00 2.67
753 755 7.576649 ACCCCTCCATTCCTAAATATAAGTCTT 59.423 37.037 0.00 0.00 0.00 3.01
754 756 7.089566 ACCCCTCCATTCCTAAATATAAGTCT 58.910 38.462 0.00 0.00 0.00 3.24
756 758 8.836735 CATACCCCTCCATTCCTAAATATAAGT 58.163 37.037 0.00 0.00 0.00 2.24
758 760 8.998957 TCATACCCCTCCATTCCTAAATATAA 57.001 34.615 0.00 0.00 0.00 0.98
759 761 8.998957 TTCATACCCCTCCATTCCTAAATATA 57.001 34.615 0.00 0.00 0.00 0.86
760 762 7.905144 TTCATACCCCTCCATTCCTAAATAT 57.095 36.000 0.00 0.00 0.00 1.28
761 763 7.715267 TTTCATACCCCTCCATTCCTAAATA 57.285 36.000 0.00 0.00 0.00 1.40
763 765 6.606241 ATTTCATACCCCTCCATTCCTAAA 57.394 37.500 0.00 0.00 0.00 1.85
764 766 6.606241 AATTTCATACCCCTCCATTCCTAA 57.394 37.500 0.00 0.00 0.00 2.69
765 767 6.606241 AAATTTCATACCCCTCCATTCCTA 57.394 37.500 0.00 0.00 0.00 2.94
766 768 5.487861 AAATTTCATACCCCTCCATTCCT 57.512 39.130 0.00 0.00 0.00 3.36
767 769 7.855784 AATAAATTTCATACCCCTCCATTCC 57.144 36.000 0.00 0.00 0.00 3.01
906 1131 1.021968 AGCAGAACGTGGTTTGGTTC 58.978 50.000 0.00 0.00 42.15 3.62
976 1211 2.644676 GTTAGACTTGGGGATTGGAGC 58.355 52.381 0.00 0.00 0.00 4.70
2008 2287 1.271054 GGGAGACGCATGATTGCCTAT 60.271 52.381 0.00 0.00 46.57 2.57
2009 2288 0.106708 GGGAGACGCATGATTGCCTA 59.893 55.000 0.00 0.00 46.57 3.93
2010 2289 1.153086 GGGAGACGCATGATTGCCT 60.153 57.895 0.00 0.00 46.57 4.75
2011 2290 1.153086 AGGGAGACGCATGATTGCC 60.153 57.895 0.00 0.00 46.57 4.52
2012 2291 1.442526 CCAGGGAGACGCATGATTGC 61.443 60.000 0.00 0.00 45.78 3.56
2013 2292 0.107508 ACCAGGGAGACGCATGATTG 60.108 55.000 0.00 0.00 0.00 2.67
2014 2293 0.179000 GACCAGGGAGACGCATGATT 59.821 55.000 0.00 0.00 0.00 2.57
2015 2294 1.690219 GGACCAGGGAGACGCATGAT 61.690 60.000 0.00 0.00 0.00 2.45
2045 2324 2.741985 CCGTGTGCATGCCGAGAA 60.742 61.111 16.68 0.00 0.00 2.87
2322 2659 0.454196 ACAACTCGTGGGTTTTGCAC 59.546 50.000 0.00 0.00 0.00 4.57
2392 2729 7.763985 TCTTTCACATTGGGAAGAAAAGAAAAC 59.236 33.333 0.95 0.00 30.49 2.43
2444 2781 7.307870 GCTTGTATTAGGAAATGCAGATCTGAG 60.308 40.741 27.04 9.43 38.66 3.35
2624 3677 4.388165 GCGAAGGACAGTTAGGAAAAGTAC 59.612 45.833 0.00 0.00 0.00 2.73
2730 4042 5.178061 TGCTTGTACTGTGATGGATTACAG 58.822 41.667 9.40 9.40 46.30 2.74
2731 4043 5.159273 TGCTTGTACTGTGATGGATTACA 57.841 39.130 0.00 0.00 0.00 2.41
2734 4046 4.847198 TCATGCTTGTACTGTGATGGATT 58.153 39.130 0.00 0.00 0.00 3.01
2920 4232 1.733912 CGGATGAACAGTGTCACCATG 59.266 52.381 0.00 0.00 0.00 3.66
3070 4382 3.766545 TGCTATTTCTGGCCTTTGTCTT 58.233 40.909 3.32 0.00 0.00 3.01
3122 4436 5.038033 GCACGGTCAAATTAAAGTCAAACA 58.962 37.500 0.00 0.00 0.00 2.83
3130 4444 5.535406 TCCTAAAAGGCACGGTCAAATTAAA 59.465 36.000 0.00 0.00 34.61 1.52
3359 4729 4.871822 CCCTGAAAGAATCCCAGGTAATT 58.128 43.478 11.24 0.00 44.46 1.40
3368 4738 1.827344 CCTTTGGCCCTGAAAGAATCC 59.173 52.381 14.11 0.00 34.07 3.01
3896 5285 6.743575 AAAACACTATCAGATTGTGCTACC 57.256 37.500 20.90 0.00 39.16 3.18
3913 5302 8.479280 CACATAATACTGAAACTGCAAAAACAC 58.521 33.333 0.00 0.00 0.00 3.32
3915 5304 7.382218 AGCACATAATACTGAAACTGCAAAAAC 59.618 33.333 0.00 0.00 0.00 2.43
3916 5305 7.432869 AGCACATAATACTGAAACTGCAAAAA 58.567 30.769 0.00 0.00 0.00 1.94
3945 5334 7.144722 AGTGATGCACGATTTCTAATTTTCA 57.855 32.000 0.00 0.00 39.64 2.69
3963 5352 2.067013 CATGAGAGCGGCATAGTGATG 58.933 52.381 1.45 0.00 36.02 3.07
3967 5356 0.678395 CTCCATGAGAGCGGCATAGT 59.322 55.000 1.45 0.00 35.31 2.12
4017 5406 2.518949 GCACTAACATTCAATGGCGTG 58.481 47.619 1.58 6.92 33.60 5.34
4020 5409 3.591196 TTGGCACTAACATTCAATGGC 57.409 42.857 1.58 0.00 36.45 4.40
4021 5410 4.353737 CGATTGGCACTAACATTCAATGG 58.646 43.478 1.58 0.00 33.60 3.16
4026 5415 4.156008 AGAAACCGATTGGCACTAACATTC 59.844 41.667 0.00 0.00 39.70 2.67
4028 5417 3.686016 AGAAACCGATTGGCACTAACAT 58.314 40.909 0.00 0.00 39.70 2.71
4034 5423 1.068541 GTGGAAGAAACCGATTGGCAC 60.069 52.381 0.00 0.00 39.70 5.01
4038 5427 6.314784 GTTCATAAGTGGAAGAAACCGATTG 58.685 40.000 0.00 0.00 0.00 2.67
4048 5437 4.381932 GGGCATTTGGTTCATAAGTGGAAG 60.382 45.833 0.00 0.00 0.00 3.46
4062 5451 1.001181 CAAGTTGGACAGGGCATTTGG 59.999 52.381 0.00 0.00 0.00 3.28
4063 5452 1.688197 ACAAGTTGGACAGGGCATTTG 59.312 47.619 7.96 0.00 0.00 2.32
4065 5454 1.133513 TCACAAGTTGGACAGGGCATT 60.134 47.619 7.96 0.00 0.00 3.56
4079 5468 7.118680 CCATTTTCCCATTTGATCTTTCACAAG 59.881 37.037 0.00 0.00 0.00 3.16
4097 5486 7.118245 GGAAATTTCAATGACTGACCATTTTCC 59.882 37.037 19.49 0.00 34.77 3.13
4098 5487 7.656948 TGGAAATTTCAATGACTGACCATTTTC 59.343 33.333 19.49 0.00 34.77 2.29
4138 5528 5.766222 CAGTATGAATCATAAGGCTTTGCC 58.234 41.667 4.45 0.00 45.45 4.52
4152 5542 7.971201 TCAGATTATTCCTCAGCAGTATGAAT 58.029 34.615 0.00 0.00 39.69 2.57
4175 5565 5.384336 TCAAAATGGAACTGAATGGACTCA 58.616 37.500 0.00 0.00 0.00 3.41
4178 5568 4.219288 AGCTCAAAATGGAACTGAATGGAC 59.781 41.667 0.00 0.00 0.00 4.02
4402 5792 2.073816 CCTCGTAACCGAAAGTTGCAT 58.926 47.619 0.00 0.00 43.69 3.96
4406 5796 0.032540 ACGCCTCGTAACCGAAAGTT 59.967 50.000 0.00 0.00 43.69 2.66
4583 6017 2.540265 AGACTTGTCTGGTCAGCAAG 57.460 50.000 21.71 21.71 42.61 4.01
4671 6106 2.160417 GCCACTTTTCATCAGAGTTCCG 59.840 50.000 0.00 0.00 0.00 4.30
4692 6128 0.647410 CTGGCAATCGAACTAGTGCG 59.353 55.000 17.71 17.71 41.22 5.34
4725 6161 1.355066 GGACGAGCTAGTGCAAGTGC 61.355 60.000 13.45 0.00 42.74 4.40
4726 6162 0.244994 AGGACGAGCTAGTGCAAGTG 59.755 55.000 19.83 0.00 42.74 3.16
4727 6163 0.528470 GAGGACGAGCTAGTGCAAGT 59.472 55.000 19.83 0.00 42.74 3.16
4728 6164 0.528017 TGAGGACGAGCTAGTGCAAG 59.472 55.000 19.83 0.00 42.74 4.01
4729 6165 0.528017 CTGAGGACGAGCTAGTGCAA 59.472 55.000 19.83 7.37 42.74 4.08
4730 6166 0.609406 ACTGAGGACGAGCTAGTGCA 60.609 55.000 19.83 7.30 42.74 4.57
4748 6184 1.278413 GGTGAGAGGGGTTGAGGTAAC 59.722 57.143 0.00 0.00 38.60 2.50
4752 6188 2.660064 CCGGTGAGAGGGGTTGAGG 61.660 68.421 0.00 0.00 0.00 3.86
4776 6216 4.443034 GGCGTTGAGGTAATTGAGGACTAT 60.443 45.833 0.00 0.00 0.00 2.12
4787 6227 0.174845 CGATCCAGGCGTTGAGGTAA 59.825 55.000 0.00 0.00 0.00 2.85
4788 6228 1.813859 CGATCCAGGCGTTGAGGTA 59.186 57.895 0.00 0.00 0.00 3.08
4789 6229 2.579201 CGATCCAGGCGTTGAGGT 59.421 61.111 0.00 0.00 0.00 3.85
4790 6230 2.892425 GCGATCCAGGCGTTGAGG 60.892 66.667 0.00 0.00 0.00 3.86
4791 6231 2.169789 CAGCGATCCAGGCGTTGAG 61.170 63.158 0.00 0.00 41.54 3.02
4792 6232 2.125552 CAGCGATCCAGGCGTTGA 60.126 61.111 0.00 0.00 41.54 3.18
4797 6237 2.467826 GCTTGTCAGCGATCCAGGC 61.468 63.158 0.00 0.00 35.91 4.85
4831 6271 4.504916 CCTCTCCTGCAGCGTCGG 62.505 72.222 8.66 1.90 0.00 4.79
4833 6273 4.828925 GGCCTCTCCTGCAGCGTC 62.829 72.222 8.66 0.00 0.00 5.19
4835 6275 4.093291 AAGGCCTCTCCTGCAGCG 62.093 66.667 5.23 1.56 46.94 5.18
4836 6276 2.124778 GAAGGCCTCTCCTGCAGC 60.125 66.667 5.23 0.00 46.94 5.25
4837 6277 1.684386 ATCGAAGGCCTCTCCTGCAG 61.684 60.000 5.23 6.78 46.94 4.41
4838 6278 1.687146 ATCGAAGGCCTCTCCTGCA 60.687 57.895 5.23 0.00 46.94 4.41
4839 6279 1.227497 CATCGAAGGCCTCTCCTGC 60.227 63.158 5.23 0.00 46.94 4.85
4840 6280 0.539051 AACATCGAAGGCCTCTCCTG 59.461 55.000 5.23 4.64 46.94 3.86
4842 6282 2.010497 GAAAACATCGAAGGCCTCTCC 58.990 52.381 5.23 0.00 0.00 3.71
4843 6283 2.699954 TGAAAACATCGAAGGCCTCTC 58.300 47.619 5.23 5.21 0.00 3.20
4844 6284 2.859165 TGAAAACATCGAAGGCCTCT 57.141 45.000 5.23 0.00 0.00 3.69
4845 6285 2.749621 ACATGAAAACATCGAAGGCCTC 59.250 45.455 5.23 0.00 0.00 4.70
4846 6286 2.749621 GACATGAAAACATCGAAGGCCT 59.250 45.455 0.00 0.00 0.00 5.19
4847 6287 2.159379 GGACATGAAAACATCGAAGGCC 60.159 50.000 0.00 0.00 0.00 5.19
4848 6288 2.749621 AGGACATGAAAACATCGAAGGC 59.250 45.455 0.00 0.00 0.00 4.35
4849 6289 4.002982 TGAGGACATGAAAACATCGAAGG 58.997 43.478 0.00 0.00 0.00 3.46
4850 6290 5.808042 ATGAGGACATGAAAACATCGAAG 57.192 39.130 0.00 0.00 35.21 3.79
4871 6311 4.518970 CGTCCAAATTATTTCCCGGATCAT 59.481 41.667 0.73 0.00 0.00 2.45
4880 6320 4.527564 CGATCAGCCGTCCAAATTATTTC 58.472 43.478 0.00 0.00 0.00 2.17
4881 6321 3.243068 GCGATCAGCCGTCCAAATTATTT 60.243 43.478 0.00 0.00 40.81 1.40
4896 6336 3.267860 GCTTGGCGAGGCGATCAG 61.268 66.667 3.44 0.00 0.00 2.90
4914 6354 1.351017 TGTGGTTGTGAGGAGGATTCC 59.649 52.381 0.00 0.00 44.39 3.01
4915 6355 2.859165 TGTGGTTGTGAGGAGGATTC 57.141 50.000 0.00 0.00 0.00 2.52
4917 6357 3.424703 CATTTGTGGTTGTGAGGAGGAT 58.575 45.455 0.00 0.00 0.00 3.24
4918 6358 2.862541 CATTTGTGGTTGTGAGGAGGA 58.137 47.619 0.00 0.00 0.00 3.71
4919 6359 1.270550 GCATTTGTGGTTGTGAGGAGG 59.729 52.381 0.00 0.00 0.00 4.30
4920 6360 1.069022 CGCATTTGTGGTTGTGAGGAG 60.069 52.381 0.00 0.00 0.00 3.69
4921 6361 0.950836 CGCATTTGTGGTTGTGAGGA 59.049 50.000 0.00 0.00 0.00 3.71
4922 6362 0.667993 ACGCATTTGTGGTTGTGAGG 59.332 50.000 0.00 0.00 0.00 3.86
4923 6363 3.829886 ATACGCATTTGTGGTTGTGAG 57.170 42.857 0.00 0.00 0.00 3.51
4924 6364 4.155099 CCTAATACGCATTTGTGGTTGTGA 59.845 41.667 0.00 0.00 0.00 3.58
4925 6365 4.083003 ACCTAATACGCATTTGTGGTTGTG 60.083 41.667 0.00 0.00 0.00 3.33
4926 6366 4.076394 ACCTAATACGCATTTGTGGTTGT 58.924 39.130 0.00 0.00 0.00 3.32
4927 6367 4.695217 ACCTAATACGCATTTGTGGTTG 57.305 40.909 0.00 0.00 0.00 3.77
4928 6368 5.715434 AAACCTAATACGCATTTGTGGTT 57.285 34.783 7.08 7.08 34.95 3.67
4929 6369 5.336134 GGAAAACCTAATACGCATTTGTGGT 60.336 40.000 0.00 0.00 0.00 4.16
4932 6372 5.124936 GGAGGAAAACCTAATACGCATTTGT 59.875 40.000 0.00 0.00 0.00 2.83
4933 6373 5.449999 GGGAGGAAAACCTAATACGCATTTG 60.450 44.000 0.00 0.00 0.00 2.32
4934 6374 4.643334 GGGAGGAAAACCTAATACGCATTT 59.357 41.667 0.00 0.00 0.00 2.32
4935 6375 4.204799 GGGAGGAAAACCTAATACGCATT 58.795 43.478 0.00 0.00 0.00 3.56
4936 6376 3.434596 GGGGAGGAAAACCTAATACGCAT 60.435 47.826 0.00 0.00 0.00 4.73
4937 6377 2.092807 GGGGAGGAAAACCTAATACGCA 60.093 50.000 0.00 0.00 0.00 5.24
4938 6378 2.172082 AGGGGAGGAAAACCTAATACGC 59.828 50.000 0.00 0.00 31.53 4.42
4939 6379 4.202295 GGTAGGGGAGGAAAACCTAATACG 60.202 50.000 0.00 0.00 38.50 3.06
4940 6380 4.103785 GGGTAGGGGAGGAAAACCTAATAC 59.896 50.000 0.00 0.00 38.50 1.89
4941 6381 4.014018 AGGGTAGGGGAGGAAAACCTAATA 60.014 45.833 0.00 0.00 38.50 0.98
4942 6382 3.128848 GGGTAGGGGAGGAAAACCTAAT 58.871 50.000 0.00 0.00 38.50 1.73
4943 6383 2.116713 AGGGTAGGGGAGGAAAACCTAA 59.883 50.000 0.00 0.00 38.50 2.69
4944 6384 1.732247 AGGGTAGGGGAGGAAAACCTA 59.268 52.381 0.00 0.00 35.84 3.08
4945 6385 0.501468 AGGGTAGGGGAGGAAAACCT 59.499 55.000 0.00 0.00 38.40 3.50
4946 6386 1.379776 AAGGGTAGGGGAGGAAAACC 58.620 55.000 0.00 0.00 0.00 3.27
4947 6387 2.377531 TCAAAGGGTAGGGGAGGAAAAC 59.622 50.000 0.00 0.00 0.00 2.43
4948 6388 2.720896 TCAAAGGGTAGGGGAGGAAAA 58.279 47.619 0.00 0.00 0.00 2.29
4949 6389 2.444033 TCAAAGGGTAGGGGAGGAAA 57.556 50.000 0.00 0.00 0.00 3.13
4950 6390 2.205342 CATCAAAGGGTAGGGGAGGAA 58.795 52.381 0.00 0.00 0.00 3.36
4951 6391 1.628043 CCATCAAAGGGTAGGGGAGGA 60.628 57.143 0.00 0.00 0.00 3.71
4952 6392 0.846693 CCATCAAAGGGTAGGGGAGG 59.153 60.000 0.00 0.00 0.00 4.30
4953 6393 0.183731 GCCATCAAAGGGTAGGGGAG 59.816 60.000 0.00 0.00 0.00 4.30
4954 6394 1.286305 GGCCATCAAAGGGTAGGGGA 61.286 60.000 0.00 0.00 0.00 4.81
4955 6395 1.230212 GGCCATCAAAGGGTAGGGG 59.770 63.158 0.00 0.00 0.00 4.79
4956 6396 0.106519 CTGGCCATCAAAGGGTAGGG 60.107 60.000 5.51 0.00 0.00 3.53
4957 6397 0.106519 CCTGGCCATCAAAGGGTAGG 60.107 60.000 5.51 0.00 0.00 3.18
4958 6398 0.106519 CCCTGGCCATCAAAGGGTAG 60.107 60.000 17.22 0.00 44.95 3.18
4959 6399 2.006748 CCCTGGCCATCAAAGGGTA 58.993 57.895 17.22 0.00 44.95 3.69
4960 6400 2.772924 CCCTGGCCATCAAAGGGT 59.227 61.111 17.22 0.00 44.95 4.34
4962 6402 2.037687 TGCCCTGGCCATCAAAGG 59.962 61.111 5.51 2.71 41.09 3.11
4963 6403 1.000521 TCTGCCCTGGCCATCAAAG 60.001 57.895 5.51 2.21 41.09 2.77
4964 6404 1.304381 GTCTGCCCTGGCCATCAAA 60.304 57.895 5.51 0.00 41.09 2.69
4965 6405 2.202236 GAGTCTGCCCTGGCCATCAA 62.202 60.000 5.51 0.00 41.09 2.57
4966 6406 2.611800 AGTCTGCCCTGGCCATCA 60.612 61.111 5.51 3.89 41.09 3.07
4967 6407 2.191641 GAGTCTGCCCTGGCCATC 59.808 66.667 5.51 0.00 41.09 3.51
4968 6408 2.285969 AGAGTCTGCCCTGGCCAT 60.286 61.111 5.51 0.00 41.09 4.40
4969 6409 3.005539 GAGAGTCTGCCCTGGCCA 61.006 66.667 4.71 4.71 41.09 5.36
4970 6410 3.791586 GGAGAGTCTGCCCTGGCC 61.792 72.222 5.57 0.00 41.09 5.36
4971 6411 3.791586 GGGAGAGTCTGCCCTGGC 61.792 72.222 19.63 0.00 41.31 4.85
4975 6415 1.867363 TTAGAAGGGAGAGTCTGCCC 58.133 55.000 25.76 20.29 43.25 5.36
4976 6416 2.835156 AGTTTAGAAGGGAGAGTCTGCC 59.165 50.000 22.49 22.49 42.52 4.85
4977 6417 4.021016 TGAAGTTTAGAAGGGAGAGTCTGC 60.021 45.833 2.44 2.44 0.00 4.26
4978 6418 5.474825 GTGAAGTTTAGAAGGGAGAGTCTG 58.525 45.833 0.00 0.00 0.00 3.51
4979 6419 4.528987 GGTGAAGTTTAGAAGGGAGAGTCT 59.471 45.833 0.00 0.00 0.00 3.24
4980 6420 4.283722 TGGTGAAGTTTAGAAGGGAGAGTC 59.716 45.833 0.00 0.00 0.00 3.36
4981 6421 4.232091 TGGTGAAGTTTAGAAGGGAGAGT 58.768 43.478 0.00 0.00 0.00 3.24
4982 6422 4.891992 TGGTGAAGTTTAGAAGGGAGAG 57.108 45.455 0.00 0.00 0.00 3.20
4983 6423 5.309543 TCATTGGTGAAGTTTAGAAGGGAGA 59.690 40.000 0.00 0.00 0.00 3.71
4984 6424 5.560724 TCATTGGTGAAGTTTAGAAGGGAG 58.439 41.667 0.00 0.00 0.00 4.30
4985 6425 5.560724 CTCATTGGTGAAGTTTAGAAGGGA 58.439 41.667 0.00 0.00 33.05 4.20
4986 6426 4.156739 GCTCATTGGTGAAGTTTAGAAGGG 59.843 45.833 0.00 0.00 33.05 3.95
4987 6427 4.761739 TGCTCATTGGTGAAGTTTAGAAGG 59.238 41.667 0.00 0.00 33.05 3.46
4988 6428 5.947228 TGCTCATTGGTGAAGTTTAGAAG 57.053 39.130 0.00 0.00 33.05 2.85
4989 6429 5.769662 ACATGCTCATTGGTGAAGTTTAGAA 59.230 36.000 0.00 0.00 33.05 2.10
4993 6433 3.006110 CCACATGCTCATTGGTGAAGTTT 59.994 43.478 0.00 0.00 33.05 2.66
5004 6444 2.422519 GGAGGTGAATCCACATGCTCAT 60.423 50.000 0.00 0.00 44.93 2.90
5010 6450 1.216990 GAGGGGAGGTGAATCCACAT 58.783 55.000 0.00 0.00 46.03 3.21
5023 6463 1.500474 CTACAATCAGGCAGAGGGGA 58.500 55.000 0.00 0.00 0.00 4.81
5030 6470 0.107703 CTTCCCGCTACAATCAGGCA 60.108 55.000 0.00 0.00 0.00 4.75
5031 6471 0.815615 CCTTCCCGCTACAATCAGGC 60.816 60.000 0.00 0.00 0.00 4.85
5032 6472 0.830648 TCCTTCCCGCTACAATCAGG 59.169 55.000 0.00 0.00 0.00 3.86
5033 6473 1.202580 CCTCCTTCCCGCTACAATCAG 60.203 57.143 0.00 0.00 0.00 2.90
5034 6474 0.830648 CCTCCTTCCCGCTACAATCA 59.169 55.000 0.00 0.00 0.00 2.57
5035 6475 1.120530 TCCTCCTTCCCGCTACAATC 58.879 55.000 0.00 0.00 0.00 2.67
5036 6476 1.694696 GATCCTCCTTCCCGCTACAAT 59.305 52.381 0.00 0.00 0.00 2.71
5037 6477 1.120530 GATCCTCCTTCCCGCTACAA 58.879 55.000 0.00 0.00 0.00 2.41
5038 6478 0.759436 GGATCCTCCTTCCCGCTACA 60.759 60.000 3.84 0.00 32.53 2.74
5039 6479 0.759436 TGGATCCTCCTTCCCGCTAC 60.759 60.000 14.23 0.00 37.46 3.58
5040 6480 0.470080 CTGGATCCTCCTTCCCGCTA 60.470 60.000 14.23 0.00 37.46 4.26
5041 6481 1.764054 CTGGATCCTCCTTCCCGCT 60.764 63.158 14.23 0.00 37.46 5.52
5042 6482 2.812619 CCTGGATCCTCCTTCCCGC 61.813 68.421 14.23 0.00 37.46 6.13
5043 6483 1.383248 ACCTGGATCCTCCTTCCCG 60.383 63.158 14.23 0.00 37.46 5.14
5044 6484 0.326618 TCACCTGGATCCTCCTTCCC 60.327 60.000 14.23 0.00 37.46 3.97
5045 6485 0.833949 GTCACCTGGATCCTCCTTCC 59.166 60.000 14.23 0.00 37.46 3.46
5063 6503 4.466726 CCTAAACTACTAACCAGGCAGAGT 59.533 45.833 0.00 0.00 0.00 3.24
5112 6557 1.971167 TCATTTGCCTGACCGCCAC 60.971 57.895 0.00 0.00 0.00 5.01
5113 6558 1.971167 GTCATTTGCCTGACCGCCA 60.971 57.895 0.90 0.00 39.72 5.69
5114 6559 2.877691 GTCATTTGCCTGACCGCC 59.122 61.111 0.90 0.00 39.72 6.13
5117 6562 2.877691 GCCGTCATTTGCCTGACC 59.122 61.111 5.81 0.00 42.06 4.02
5118 6563 1.852067 AACGCCGTCATTTGCCTGAC 61.852 55.000 0.00 2.06 41.73 3.51
5121 6566 0.387565 AAAAACGCCGTCATTTGCCT 59.612 45.000 0.00 0.00 0.00 4.75
5145 6592 4.981806 TCAAACCCAGAAGACAAACTTG 57.018 40.909 0.00 0.00 39.13 3.16
5157 6604 2.234908 ACTCGAGAAGGATCAAACCCAG 59.765 50.000 21.68 0.00 0.00 4.45
5158 6605 2.257207 ACTCGAGAAGGATCAAACCCA 58.743 47.619 21.68 0.00 0.00 4.51
5164 6611 1.743958 GGACGAACTCGAGAAGGATCA 59.256 52.381 21.68 0.00 43.02 2.92
5165 6612 1.743958 TGGACGAACTCGAGAAGGATC 59.256 52.381 21.68 9.42 43.02 3.36
5212 6660 7.387397 GCTCCAAGAAGATAACCAGAATCTATG 59.613 40.741 0.00 0.00 33.32 2.23
5213 6661 7.449247 GCTCCAAGAAGATAACCAGAATCTAT 58.551 38.462 0.00 0.00 33.32 1.98
5214 6662 6.461648 CGCTCCAAGAAGATAACCAGAATCTA 60.462 42.308 0.00 0.00 33.32 1.98
5219 6667 2.168521 CCGCTCCAAGAAGATAACCAGA 59.831 50.000 0.00 0.00 0.00 3.86
5226 6674 0.539051 CCTCACCGCTCCAAGAAGAT 59.461 55.000 0.00 0.00 0.00 2.40
5231 6679 0.108138 CCTAACCTCACCGCTCCAAG 60.108 60.000 0.00 0.00 0.00 3.61
5234 6682 1.551019 AACCCTAACCTCACCGCTCC 61.551 60.000 0.00 0.00 0.00 4.70
5236 6684 0.769247 AAAACCCTAACCTCACCGCT 59.231 50.000 0.00 0.00 0.00 5.52
5252 6700 7.048629 TCAAATCTAGCCACACAATGAAAAA 57.951 32.000 0.00 0.00 0.00 1.94
5268 6716 5.046376 TCAGAAGCACCTGACATCAAATCTA 60.046 40.000 4.23 0.00 38.18 1.98
5280 6728 6.373774 ACTCTTGAATAAATCAGAAGCACCTG 59.626 38.462 0.00 0.00 39.77 4.00
5297 6745 1.214367 GTCGCCGTTGAACTCTTGAA 58.786 50.000 0.00 0.00 0.00 2.69
5298 6746 0.937699 CGTCGCCGTTGAACTCTTGA 60.938 55.000 0.00 0.00 0.00 3.02
5299 6747 0.937699 TCGTCGCCGTTGAACTCTTG 60.938 55.000 0.00 0.00 35.01 3.02
5300 6748 0.938168 GTCGTCGCCGTTGAACTCTT 60.938 55.000 0.00 0.00 35.01 2.85
5301 6749 1.371389 GTCGTCGCCGTTGAACTCT 60.371 57.895 0.00 0.00 35.01 3.24
5302 6750 1.371389 AGTCGTCGCCGTTGAACTC 60.371 57.895 0.00 0.00 35.01 3.01
5303 6751 1.660575 CAGTCGTCGCCGTTGAACT 60.661 57.895 0.00 0.00 35.01 3.01
5304 6752 2.844146 CAGTCGTCGCCGTTGAAC 59.156 61.111 0.00 0.00 35.01 3.18
5317 6765 2.509336 CGTCATGGGGTCGCAGTC 60.509 66.667 0.00 0.00 0.00 3.51
5322 6770 1.740296 GACCAACGTCATGGGGTCG 60.740 63.158 10.92 0.00 45.18 4.79
5327 6775 1.406887 CCCTAAGGACCAACGTCATGG 60.407 57.143 4.68 4.68 46.38 3.66
5329 6777 0.909623 CCCCTAAGGACCAACGTCAT 59.090 55.000 0.00 0.00 41.13 3.06
5330 6778 1.833787 GCCCCTAAGGACCAACGTCA 61.834 60.000 0.00 0.00 41.13 4.35
5366 6814 3.605634 TGACCTTATTGATGACAACCGG 58.394 45.455 0.00 0.00 38.90 5.28
5398 6846 4.803088 GCACTGTTGTCATCACTCTCTATC 59.197 45.833 0.00 0.00 0.00 2.08
5409 6857 1.603802 CCGTCAAAGCACTGTTGTCAT 59.396 47.619 0.00 0.00 0.00 3.06
5410 6858 1.013596 CCGTCAAAGCACTGTTGTCA 58.986 50.000 0.00 0.00 0.00 3.58
5433 6881 0.172803 ACCACTATCGTCGCCAGAAC 59.827 55.000 0.62 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.