Multiple sequence alignment - TraesCS4D01G125900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G125900 chr4D 100.000 7809 0 0 1 7809 110074607 110082415 0.000000e+00 14421.0
1 TraesCS4D01G125900 chr4D 82.719 2604 314 66 3117 5645 485618540 485621082 0.000000e+00 2191.0
2 TraesCS4D01G125900 chr4D 85.324 695 81 9 5643 6331 485621282 485621961 0.000000e+00 699.0
3 TraesCS4D01G125900 chr4D 85.890 489 54 11 6431 6909 485621963 485622446 2.510000e-139 507.0
4 TraesCS4D01G125900 chr4D 89.356 357 23 10 2638 2993 485617901 485618243 1.200000e-117 435.0
5 TraesCS4D01G125900 chr4D 79.899 398 36 29 824 1210 485612675 485613039 1.300000e-62 252.0
6 TraesCS4D01G125900 chr4D 90.000 150 15 0 7235 7384 485646921 485647070 2.220000e-45 195.0
7 TraesCS4D01G125900 chr4D 95.536 112 5 0 2993 3104 485618293 485618404 6.230000e-41 180.0
8 TraesCS4D01G125900 chr4D 76.892 251 41 8 1843 2091 485617247 485617482 8.230000e-25 126.0
9 TraesCS4D01G125900 chr4A 95.277 3388 96 27 2977 6332 466642088 466638733 0.000000e+00 5312.0
10 TraesCS4D01G125900 chr4A 93.872 1387 63 8 6424 7809 466638736 466637371 0.000000e+00 2071.0
11 TraesCS4D01G125900 chr4A 92.726 1361 54 15 1669 2992 466643495 466642143 0.000000e+00 1923.0
12 TraesCS4D01G125900 chr4A 83.978 905 52 35 724 1577 466644360 466643498 0.000000e+00 782.0
13 TraesCS4D01G125900 chr4B 93.982 3373 142 20 2977 6332 171626330 171623002 0.000000e+00 5048.0
14 TraesCS4D01G125900 chr4B 94.497 1363 54 13 6464 7809 171622978 171621620 0.000000e+00 2082.0
15 TraesCS4D01G125900 chr4B 95.916 955 33 2 2038 2992 171627298 171626350 0.000000e+00 1543.0
16 TraesCS4D01G125900 chr4B 82.461 1796 215 45 3906 5645 619446885 619448636 0.000000e+00 1480.0
17 TraesCS4D01G125900 chr4B 83.638 929 72 37 705 1579 171628724 171627822 0.000000e+00 800.0
18 TraesCS4D01G125900 chr4B 85.277 686 84 10 5649 6330 619448843 619449515 0.000000e+00 691.0
19 TraesCS4D01G125900 chr4B 82.824 786 106 21 3121 3883 619445723 619446502 0.000000e+00 676.0
20 TraesCS4D01G125900 chr4B 91.421 373 27 3 1669 2039 171627826 171627457 2.510000e-139 507.0
21 TraesCS4D01G125900 chr4B 89.101 367 24 12 2628 2993 619445068 619445419 7.190000e-120 442.0
22 TraesCS4D01G125900 chr4B 82.955 352 53 5 7196 7542 619473351 619473700 2.120000e-80 311.0
23 TraesCS4D01G125900 chr4B 91.705 217 14 2 506 718 171629223 171629007 1.650000e-76 298.0
24 TraesCS4D01G125900 chr4B 79.699 399 36 27 824 1210 619443537 619443902 6.050000e-61 246.0
25 TraesCS4D01G125900 chr4B 96.364 110 4 0 2995 3104 619445470 619445579 1.730000e-41 182.0
26 TraesCS4D01G125900 chr4B 74.463 419 85 17 4 406 650881085 650881497 2.260000e-35 161.0
27 TraesCS4D01G125900 chr5A 82.154 3110 369 97 3123 6157 666348745 666351743 0.000000e+00 2497.0
28 TraesCS4D01G125900 chr5A 78.954 784 131 25 6993 7762 666352659 666353422 3.250000e-138 503.0
29 TraesCS4D01G125900 chr5A 85.163 492 54 14 6431 6909 666352131 666352616 3.280000e-133 486.0
30 TraesCS4D01G125900 chr5A 90.591 372 21 9 2623 2993 666348175 666348533 1.520000e-131 481.0
31 TraesCS4D01G125900 chr5A 79.688 384 36 25 828 1210 666346721 666347063 1.010000e-58 239.0
32 TraesCS4D01G125900 chrUn 74.626 1135 186 64 2444 3531 237130130 237129051 2.620000e-109 407.0
33 TraesCS4D01G125900 chrUn 77.370 654 100 29 2444 3076 206992431 206993057 2.090000e-90 344.0
34 TraesCS4D01G125900 chrUn 77.586 232 40 11 3300 3525 206993947 206994172 6.360000e-26 130.0
35 TraesCS4D01G125900 chr6D 81.297 401 55 9 2 389 446813354 446812961 2.740000e-79 307.0
36 TraesCS4D01G125900 chr6D 78.244 501 84 22 4 490 463753246 463753735 1.650000e-76 298.0
37 TraesCS4D01G125900 chr6D 77.495 471 81 19 12 472 41935472 41935927 7.770000e-65 259.0
38 TraesCS4D01G125900 chr1B 78.471 497 82 20 12 491 588337400 588337888 1.270000e-77 302.0
39 TraesCS4D01G125900 chr1B 96.226 106 3 1 6327 6431 359902146 359902041 1.040000e-38 172.0
40 TraesCS4D01G125900 chr1B 92.157 102 7 1 1572 1672 606612822 606612923 8.170000e-30 143.0
41 TraesCS4D01G125900 chr3A 78.587 467 84 12 2 459 504606534 504606075 2.130000e-75 294.0
42 TraesCS4D01G125900 chr3A 77.711 498 81 23 4 484 679935462 679934978 2.150000e-70 278.0
43 TraesCS4D01G125900 chr3A 75.891 477 94 16 4 464 1265623 1266094 2.840000e-54 224.0
44 TraesCS4D01G125900 chr3A 97.087 103 2 1 6328 6429 109150961 109150859 1.040000e-38 172.0
45 TraesCS4D01G125900 chr5B 77.912 498 82 23 4 485 482994612 482995097 1.280000e-72 285.0
46 TraesCS4D01G125900 chr5B 75.833 480 83 29 4 461 705947729 705947261 6.140000e-51 213.0
47 TraesCS4D01G125900 chr5B 92.157 102 6 2 1579 1678 693583895 693583794 8.170000e-30 143.0
48 TraesCS4D01G125900 chr5B 75.926 270 53 10 4 262 6914508 6914776 2.290000e-25 128.0
49 TraesCS4D01G125900 chr3D 81.513 357 57 6 119 473 5050412 5050761 1.280000e-72 285.0
50 TraesCS4D01G125900 chr7B 76.639 488 85 23 4 472 663845580 663845103 7.830000e-60 243.0
51 TraesCS4D01G125900 chr7B 93.805 113 6 1 6320 6431 192854155 192854267 1.350000e-37 169.0
52 TraesCS4D01G125900 chr7B 93.269 104 6 1 1570 1672 588874911 588875014 1.360000e-32 152.0
53 TraesCS4D01G125900 chr7B 94.000 100 5 1 1576 1674 562993066 562993165 4.880000e-32 150.0
54 TraesCS4D01G125900 chr7B 93.939 99 5 1 1575 1672 589348416 589348318 1.760000e-31 148.0
55 TraesCS4D01G125900 chr2A 75.649 501 97 21 4 490 19882184 19881695 7.880000e-55 226.0
56 TraesCS4D01G125900 chr2A 93.913 115 5 1 6321 6433 587158365 587158251 1.040000e-38 172.0
57 TraesCS4D01G125900 chr2A 94.000 100 5 1 1576 1674 353471722 353471623 4.880000e-32 150.0
58 TraesCS4D01G125900 chr2A 93.878 98 5 1 1576 1672 631859201 631859104 6.310000e-31 147.0
59 TraesCS4D01G125900 chr5D 98.000 100 2 0 6326 6425 65990488 65990587 2.900000e-39 174.0
60 TraesCS4D01G125900 chr5D 89.147 129 10 4 6327 6454 134782208 134782083 2.920000e-34 158.0
61 TraesCS4D01G125900 chr6B 96.190 105 4 0 6323 6427 577173378 577173482 1.040000e-38 172.0
62 TraesCS4D01G125900 chr6B 83.117 77 12 1 4 79 665557486 665557410 1.410000e-07 69.4
63 TraesCS4D01G125900 chr7A 96.154 104 4 0 6324 6427 511927310 511927413 3.750000e-38 171.0
64 TraesCS4D01G125900 chr7A 92.157 102 7 1 1575 1675 511927412 511927311 8.170000e-30 143.0
65 TraesCS4D01G125900 chr7D 92.920 113 7 1 6320 6431 208540427 208540315 6.270000e-36 163.0
66 TraesCS4D01G125900 chr2D 94.000 100 5 1 1576 1674 275951221 275951320 4.880000e-32 150.0
67 TraesCS4D01G125900 chr2B 80.095 211 30 10 4 204 23017002 23016794 6.310000e-31 147.0
68 TraesCS4D01G125900 chr2B 85.526 76 11 0 4 79 686806809 686806734 6.500000e-11 80.5
69 TraesCS4D01G125900 chr1A 74.725 182 35 8 4 175 30784300 30784120 3.910000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G125900 chr4D 110074607 110082415 7808 False 14421.000000 14421 100.000000 1 7809 1 chr4D.!!$F1 7808
1 TraesCS4D01G125900 chr4D 485617247 485622446 5199 False 689.666667 2191 85.952833 1843 6909 6 chr4D.!!$F4 5066
2 TraesCS4D01G125900 chr4A 466637371 466644360 6989 True 2522.000000 5312 91.463250 724 7809 4 chr4A.!!$R1 7085
3 TraesCS4D01G125900 chr4B 171621620 171629223 7603 True 1713.000000 5048 91.859833 506 7809 6 chr4B.!!$R1 7303
4 TraesCS4D01G125900 chr4B 619443537 619449515 5978 False 619.500000 1480 85.954333 824 6330 6 chr4B.!!$F3 5506
5 TraesCS4D01G125900 chr5A 666346721 666353422 6701 False 841.200000 2497 83.310000 828 7762 5 chr5A.!!$F1 6934
6 TraesCS4D01G125900 chrUn 237129051 237130130 1079 True 407.000000 407 74.626000 2444 3531 1 chrUn.!!$R1 1087
7 TraesCS4D01G125900 chrUn 206992431 206994172 1741 False 237.000000 344 77.478000 2444 3525 2 chrUn.!!$F1 1081

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
503 504 0.179037 GACGGGGCCCAATAAGGTAC 60.179 60.000 26.86 0.61 34.66 3.34 F
1588 2124 0.179119 CACACGTATTCCCTCCGTCC 60.179 60.000 0.00 0.00 31.46 4.79 F
1592 2128 0.538118 CGTATTCCCTCCGTCCCAAA 59.462 55.000 0.00 0.00 0.00 3.28 F
2136 2891 0.759959 TGTAAAACGTCCAGCCTGGA 59.240 50.000 10.05 10.05 45.98 3.86 F
3863 5580 0.468226 GGGGTCTAACATGATGCGGA 59.532 55.000 0.00 0.00 0.00 5.54 F
4860 6996 2.159142 GGGACCGACGATGTGAAAGTAT 60.159 50.000 0.00 0.00 0.00 2.12 F
6334 8944 3.070302 CCAGCACCTTCTCTTATACTCCC 59.930 52.174 0.00 0.00 0.00 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2329 3085 0.250553 CCTTGGCGGTTACCAGTTCA 60.251 55.000 1.13 0.00 41.82 3.18 R
3297 4972 1.601759 GCTTTGCAGGCTGACAGGA 60.602 57.895 20.86 7.61 0.00 3.86 R
3394 5078 1.813513 AGTTTCATGAAGTGGGCTCG 58.186 50.000 8.41 0.00 0.00 5.03 R
4101 6200 2.300152 TGAAGTGTCTCCTGGTAGCAAG 59.700 50.000 0.00 0.00 0.00 4.01 R
5019 7168 1.593196 CCTTGTCTGGTTTTCGAGCA 58.407 50.000 0.00 0.00 0.00 4.26 R
6407 9017 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28 R
7607 10279 0.594540 TGTTTGTCATGCGTTGCTGC 60.595 50.000 0.00 0.00 0.00 5.25 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.736739 AAAGCCCGTAAAGCTCCC 57.263 55.556 0.00 0.00 40.49 4.30
18 19 1.765074 AAAGCCCGTAAAGCTCCCA 59.235 52.632 0.00 0.00 40.49 4.37
19 20 0.608308 AAAGCCCGTAAAGCTCCCAC 60.608 55.000 0.00 0.00 40.49 4.61
20 21 2.437895 GCCCGTAAAGCTCCCACC 60.438 66.667 0.00 0.00 0.00 4.61
21 22 2.967946 GCCCGTAAAGCTCCCACCT 61.968 63.158 0.00 0.00 0.00 4.00
22 23 1.683441 CCCGTAAAGCTCCCACCTT 59.317 57.895 0.00 0.00 0.00 3.50
23 24 0.392595 CCCGTAAAGCTCCCACCTTC 60.393 60.000 0.00 0.00 0.00 3.46
24 25 0.739813 CCGTAAAGCTCCCACCTTCG 60.740 60.000 0.00 0.00 0.00 3.79
25 26 1.359459 CGTAAAGCTCCCACCTTCGC 61.359 60.000 0.00 0.00 0.00 4.70
26 27 1.079405 TAAAGCTCCCACCTTCGCG 60.079 57.895 0.00 0.00 0.00 5.87
70 71 3.710722 CCGCTCCCTGTCCAAGCT 61.711 66.667 0.00 0.00 33.83 3.74
71 72 2.435586 CGCTCCCTGTCCAAGCTG 60.436 66.667 0.00 0.00 33.83 4.24
72 73 2.749441 GCTCCCTGTCCAAGCTGC 60.749 66.667 0.00 0.00 33.23 5.25
73 74 3.076092 CTCCCTGTCCAAGCTGCT 58.924 61.111 0.00 0.00 0.00 4.24
74 75 1.078567 CTCCCTGTCCAAGCTGCTC 60.079 63.158 1.00 0.00 0.00 4.26
75 76 2.045536 CCCTGTCCAAGCTGCTCC 60.046 66.667 1.00 0.00 0.00 4.70
76 77 2.045536 CCTGTCCAAGCTGCTCCC 60.046 66.667 1.00 0.00 0.00 4.30
77 78 2.045536 CTGTCCAAGCTGCTCCCC 60.046 66.667 1.00 0.00 0.00 4.81
78 79 3.635268 CTGTCCAAGCTGCTCCCCC 62.635 68.421 1.00 0.00 0.00 5.40
79 80 4.785453 GTCCAAGCTGCTCCCCCG 62.785 72.222 1.00 0.00 0.00 5.73
94 95 4.988598 CCGCACAGTGGGCTTCGT 62.989 66.667 16.85 0.00 0.00 3.85
95 96 3.716006 CGCACAGTGGGCTTCGTG 61.716 66.667 16.85 0.00 0.00 4.35
96 97 3.357079 GCACAGTGGGCTTCGTGG 61.357 66.667 11.01 0.00 0.00 4.94
97 98 3.357079 CACAGTGGGCTTCGTGGC 61.357 66.667 0.00 0.00 40.96 5.01
106 107 2.813474 CTTCGTGGCCGCGATGAA 60.813 61.111 37.57 25.51 40.76 2.57
107 108 2.802667 CTTCGTGGCCGCGATGAAG 61.803 63.158 37.57 29.57 40.76 3.02
118 119 4.235762 GATGAAGCCGGCCCGCTA 62.236 66.667 26.15 4.96 38.44 4.26
119 120 4.241555 ATGAAGCCGGCCCGCTAG 62.242 66.667 26.15 0.00 38.44 3.42
128 129 2.844839 GCCCGCTAGGACCCAGAT 60.845 66.667 0.00 0.00 41.02 2.90
129 130 3.142393 CCCGCTAGGACCCAGATG 58.858 66.667 0.00 0.00 41.02 2.90
130 131 2.511452 CCCGCTAGGACCCAGATGG 61.511 68.421 0.00 0.00 41.02 3.51
140 141 3.174313 CCAGATGGGGCCCTATGG 58.826 66.667 27.83 19.74 0.00 2.74
150 151 4.677378 CCCTATGGGCCCAGATCT 57.323 61.111 31.97 16.40 35.35 2.75
151 152 2.073232 CCCTATGGGCCCAGATCTG 58.927 63.158 31.97 16.24 35.35 2.90
152 153 1.495579 CCCTATGGGCCCAGATCTGG 61.496 65.000 31.69 31.69 41.54 3.86
190 191 4.715523 CACCCGGCACCATCGGTT 62.716 66.667 0.00 0.00 45.51 4.44
191 192 3.004354 ACCCGGCACCATCGGTTA 61.004 61.111 0.00 0.00 45.51 2.85
192 193 2.203015 CCCGGCACCATCGGTTAG 60.203 66.667 0.00 0.00 45.51 2.34
193 194 2.895372 CCGGCACCATCGGTTAGC 60.895 66.667 0.00 0.00 42.33 3.09
194 195 2.895372 CGGCACCATCGGTTAGCC 60.895 66.667 4.76 4.76 40.19 3.93
195 196 2.516225 GGCACCATCGGTTAGCCC 60.516 66.667 3.65 0.00 38.40 5.19
196 197 2.516225 GCACCATCGGTTAGCCCC 60.516 66.667 0.00 0.00 31.02 5.80
277 278 2.828868 GCCACCGGCCTATCATCA 59.171 61.111 0.00 0.00 44.06 3.07
278 279 1.598130 GCCACCGGCCTATCATCAC 60.598 63.158 0.00 0.00 44.06 3.06
279 280 1.071471 CCACCGGCCTATCATCACC 59.929 63.158 0.00 0.00 0.00 4.02
280 281 1.300931 CACCGGCCTATCATCACCG 60.301 63.158 0.00 0.00 45.21 4.94
281 282 2.357517 CCGGCCTATCATCACCGC 60.358 66.667 0.00 0.00 44.29 5.68
282 283 2.357517 CGGCCTATCATCACCGCC 60.358 66.667 0.00 0.00 39.08 6.13
283 284 2.357517 GGCCTATCATCACCGCCG 60.358 66.667 0.00 0.00 0.00 6.46
284 285 2.357517 GCCTATCATCACCGCCGG 60.358 66.667 0.00 0.00 0.00 6.13
285 286 2.357517 CCTATCATCACCGCCGGC 60.358 66.667 19.07 19.07 0.00 6.13
286 287 2.734723 CTATCATCACCGCCGGCG 60.735 66.667 41.00 41.00 39.44 6.46
287 288 4.961511 TATCATCACCGCCGGCGC 62.962 66.667 42.39 8.75 38.24 6.53
309 310 4.667935 TGCCCCGGGAAGGAGGAA 62.668 66.667 26.32 0.00 45.00 3.36
310 311 4.111053 GCCCCGGGAAGGAGGAAC 62.111 72.222 26.32 0.00 45.00 3.62
311 312 3.782443 CCCCGGGAAGGAGGAACG 61.782 72.222 26.32 0.00 45.00 3.95
312 313 3.001406 CCCGGGAAGGAGGAACGT 61.001 66.667 18.48 0.00 45.00 3.99
313 314 2.264794 CCGGGAAGGAGGAACGTG 59.735 66.667 0.00 0.00 45.00 4.49
314 315 2.434359 CGGGAAGGAGGAACGTGC 60.434 66.667 0.00 0.00 0.00 5.34
315 316 2.434359 GGGAAGGAGGAACGTGCG 60.434 66.667 0.00 0.00 0.00 5.34
316 317 3.119096 GGAAGGAGGAACGTGCGC 61.119 66.667 0.00 0.00 0.00 6.09
317 318 2.357034 GAAGGAGGAACGTGCGCA 60.357 61.111 5.66 5.66 0.00 6.09
318 319 2.357517 AAGGAGGAACGTGCGCAG 60.358 61.111 12.22 7.95 0.00 5.18
319 320 3.883744 AAGGAGGAACGTGCGCAGG 62.884 63.158 27.18 27.18 0.00 4.85
320 321 4.681978 GGAGGAACGTGCGCAGGT 62.682 66.667 28.63 28.63 0.00 4.00
321 322 2.260434 GAGGAACGTGCGCAGGTA 59.740 61.111 33.19 0.00 0.00 3.08
322 323 2.048503 AGGAACGTGCGCAGGTAC 60.049 61.111 33.19 27.15 0.00 3.34
328 329 3.768632 GTGCGCAGGTACGAGAAG 58.231 61.111 12.22 0.00 34.06 2.85
329 330 1.211969 GTGCGCAGGTACGAGAAGA 59.788 57.895 12.22 0.00 34.06 2.87
330 331 1.071567 GTGCGCAGGTACGAGAAGAC 61.072 60.000 12.22 0.00 34.06 3.01
331 332 1.516603 GCGCAGGTACGAGAAGACC 60.517 63.158 0.30 0.00 35.83 3.85
332 333 1.139095 CGCAGGTACGAGAAGACCC 59.861 63.158 0.00 0.00 36.27 4.46
333 334 1.139095 GCAGGTACGAGAAGACCCG 59.861 63.158 0.00 0.00 36.27 5.28
334 335 1.139095 CAGGTACGAGAAGACCCGC 59.861 63.158 0.00 0.00 36.27 6.13
335 336 2.050934 AGGTACGAGAAGACCCGCC 61.051 63.158 0.00 0.00 36.27 6.13
336 337 2.101770 GTACGAGAAGACCCGCCG 59.898 66.667 0.00 0.00 0.00 6.46
337 338 2.046023 TACGAGAAGACCCGCCGA 60.046 61.111 0.00 0.00 0.00 5.54
338 339 2.401766 TACGAGAAGACCCGCCGAC 61.402 63.158 0.00 0.00 0.00 4.79
339 340 4.831307 CGAGAAGACCCGCCGACG 62.831 72.222 0.00 0.00 39.67 5.12
358 359 4.742201 CGACACCACTCGGGCCAG 62.742 72.222 4.39 0.00 42.05 4.85
359 360 3.311110 GACACCACTCGGGCCAGA 61.311 66.667 4.39 4.83 42.05 3.86
360 361 2.607750 ACACCACTCGGGCCAGAT 60.608 61.111 5.89 0.00 42.05 2.90
361 362 2.187946 CACCACTCGGGCCAGATC 59.812 66.667 5.89 0.00 42.05 2.75
362 363 3.083997 ACCACTCGGGCCAGATCC 61.084 66.667 5.89 0.00 42.05 3.36
364 365 4.227134 CACTCGGGCCAGATCCGG 62.227 72.222 5.89 0.00 46.78 5.14
434 435 3.003763 GGGGAGGAGGCTCACGTT 61.004 66.667 17.69 0.00 0.00 3.99
435 436 2.266055 GGGAGGAGGCTCACGTTG 59.734 66.667 17.69 0.00 0.00 4.10
436 437 2.435059 GGAGGAGGCTCACGTTGC 60.435 66.667 17.69 1.99 0.00 4.17
500 501 2.194868 GGACGGGGCCCAATAAGG 59.805 66.667 26.86 7.44 37.03 2.69
501 502 2.686572 GGACGGGGCCCAATAAGGT 61.687 63.158 26.86 11.23 34.66 3.50
502 503 1.347243 GGACGGGGCCCAATAAGGTA 61.347 60.000 26.86 0.00 34.66 3.08
503 504 0.179037 GACGGGGCCCAATAAGGTAC 60.179 60.000 26.86 0.61 34.66 3.34
504 505 0.915387 ACGGGGCCCAATAAGGTACA 60.915 55.000 26.86 0.00 34.66 2.90
517 518 7.379750 CCAATAAGGTACATTCCTAGCTAGAC 58.620 42.308 22.70 10.61 36.74 2.59
534 535 4.563786 GCTAGACTAACCTGGTTGAAAGCT 60.564 45.833 22.04 13.78 0.00 3.74
546 547 7.454694 ACCTGGTTGAAAGCTAAGGATTAAAAT 59.545 33.333 0.00 0.00 0.00 1.82
636 637 3.692101 TGTCGAAACAAAATGTGACACCT 59.308 39.130 2.45 0.00 29.51 4.00
657 662 7.658982 ACACCTCAAGTAATGCACATAGATATG 59.341 37.037 0.00 0.00 39.55 1.78
669 674 5.409520 GCACATAGATATGGCTCAATTCGAA 59.590 40.000 0.00 0.00 38.00 3.71
676 681 3.940209 TGGCTCAATTCGAAATTTGCT 57.060 38.095 0.00 0.00 0.00 3.91
682 687 5.860716 GCTCAATTCGAAATTTGCTCTTTCT 59.139 36.000 0.00 0.00 31.79 2.52
686 691 6.808008 ATTCGAAATTTGCTCTTTCTCTGA 57.192 33.333 0.00 0.00 31.79 3.27
694 699 3.088532 TGCTCTTTCTCTGACTCTCTCC 58.911 50.000 0.00 0.00 0.00 3.71
697 702 4.380867 GCTCTTTCTCTGACTCTCTCCTTG 60.381 50.000 0.00 0.00 0.00 3.61
702 707 2.164219 CTCTGACTCTCTCCTTGCACTC 59.836 54.545 0.00 0.00 0.00 3.51
718 723 3.119137 TGCACTCGTTCATGCTACTACAT 60.119 43.478 0.00 0.00 42.55 2.29
720 725 4.441415 GCACTCGTTCATGCTACTACATAC 59.559 45.833 0.00 0.00 38.84 2.39
722 727 5.683302 CACTCGTTCATGCTACTACATACTG 59.317 44.000 0.00 0.00 0.00 2.74
792 1096 1.227380 CCATCGTGTCAGCCTAGCC 60.227 63.158 0.00 0.00 0.00 3.93
793 1097 1.680522 CCATCGTGTCAGCCTAGCCT 61.681 60.000 0.00 0.00 0.00 4.58
794 1098 0.529337 CATCGTGTCAGCCTAGCCTG 60.529 60.000 0.00 0.00 0.00 4.85
856 1170 1.376295 GCTTTTTGCTGCCCATGGG 60.376 57.895 27.87 27.87 38.95 4.00
965 1320 1.374631 CTACTGGCGCTGCAGTCAA 60.375 57.895 20.44 5.95 33.26 3.18
973 1332 2.444351 GCGCTGCAGTCAATCAATTAC 58.556 47.619 16.64 0.00 0.00 1.89
975 1334 3.786818 GCGCTGCAGTCAATCAATTACTC 60.787 47.826 16.64 0.00 0.00 2.59
976 1335 3.242543 CGCTGCAGTCAATCAATTACTCC 60.243 47.826 16.64 0.00 0.00 3.85
1158 1517 1.420430 AGAAGGAGAACAACACGGGA 58.580 50.000 0.00 0.00 0.00 5.14
1232 1623 2.369532 CTCTACCTAGTCGCTCTACCCT 59.630 54.545 0.00 0.00 0.00 4.34
1237 1628 3.053768 ACCTAGTCGCTCTACCCTAAGTT 60.054 47.826 0.00 0.00 0.00 2.66
1238 1629 4.164988 ACCTAGTCGCTCTACCCTAAGTTA 59.835 45.833 0.00 0.00 0.00 2.24
1239 1630 4.514816 CCTAGTCGCTCTACCCTAAGTTAC 59.485 50.000 0.00 0.00 0.00 2.50
1240 1631 4.233632 AGTCGCTCTACCCTAAGTTACT 57.766 45.455 0.00 0.00 0.00 2.24
1249 1640 9.002600 GCTCTACCCTAAGTTACTTAGTAGATC 57.997 40.741 24.92 18.80 41.09 2.75
1274 1665 7.224753 TCCACTCATTTCAGCGATAGTTAATTC 59.775 37.037 0.00 0.00 39.35 2.17
1276 1667 7.011389 CACTCATTTCAGCGATAGTTAATTCCA 59.989 37.037 0.00 0.00 39.35 3.53
1396 1789 7.145932 ACTTAGGAACATTTTACAGTGCATC 57.854 36.000 0.00 0.00 0.00 3.91
1403 1796 7.326063 GGAACATTTTACAGTGCATCTTGTTAC 59.674 37.037 6.76 2.63 0.00 2.50
1412 1805 7.595311 CAGTGCATCTTGTTACTGTATAACA 57.405 36.000 0.00 0.00 36.63 2.41
1413 1806 7.456253 CAGTGCATCTTGTTACTGTATAACAC 58.544 38.462 0.00 0.00 37.18 3.32
1414 1807 7.331934 CAGTGCATCTTGTTACTGTATAACACT 59.668 37.037 0.00 0.00 37.18 3.55
1415 1808 7.878127 AGTGCATCTTGTTACTGTATAACACTT 59.122 33.333 0.00 0.00 37.18 3.16
1416 1809 8.504005 GTGCATCTTGTTACTGTATAACACTTT 58.496 33.333 0.00 0.00 37.18 2.66
1417 1810 9.713713 TGCATCTTGTTACTGTATAACACTTTA 57.286 29.630 0.00 0.00 37.18 1.85
1537 1949 2.905415 AGCAGGGATGGAATTTGACA 57.095 45.000 0.00 0.00 0.00 3.58
1577 2113 3.801114 TGATAGCAAGCTCACACGTAT 57.199 42.857 0.00 0.00 0.00 3.06
1579 2115 4.112634 TGATAGCAAGCTCACACGTATTC 58.887 43.478 0.00 0.00 0.00 1.75
1580 2116 1.726853 AGCAAGCTCACACGTATTCC 58.273 50.000 0.00 0.00 0.00 3.01
1581 2117 0.727398 GCAAGCTCACACGTATTCCC 59.273 55.000 0.00 0.00 0.00 3.97
1582 2118 1.676014 GCAAGCTCACACGTATTCCCT 60.676 52.381 0.00 0.00 0.00 4.20
1583 2119 2.271800 CAAGCTCACACGTATTCCCTC 58.728 52.381 0.00 0.00 0.00 4.30
1584 2120 0.824759 AGCTCACACGTATTCCCTCC 59.175 55.000 0.00 0.00 0.00 4.30
1585 2121 0.527817 GCTCACACGTATTCCCTCCG 60.528 60.000 0.00 0.00 0.00 4.63
1586 2122 0.815734 CTCACACGTATTCCCTCCGT 59.184 55.000 0.00 0.00 34.71 4.69
1587 2123 0.813184 TCACACGTATTCCCTCCGTC 59.187 55.000 0.00 0.00 31.46 4.79
1588 2124 0.179119 CACACGTATTCCCTCCGTCC 60.179 60.000 0.00 0.00 31.46 4.79
1589 2125 1.325476 ACACGTATTCCCTCCGTCCC 61.325 60.000 0.00 0.00 31.46 4.46
1590 2126 1.000739 ACGTATTCCCTCCGTCCCA 59.999 57.895 0.00 0.00 0.00 4.37
1591 2127 0.615544 ACGTATTCCCTCCGTCCCAA 60.616 55.000 0.00 0.00 0.00 4.12
1592 2128 0.538118 CGTATTCCCTCCGTCCCAAA 59.462 55.000 0.00 0.00 0.00 3.28
1593 2129 1.065998 CGTATTCCCTCCGTCCCAAAA 60.066 52.381 0.00 0.00 0.00 2.44
1594 2130 2.420967 CGTATTCCCTCCGTCCCAAAAT 60.421 50.000 0.00 0.00 0.00 1.82
1595 2131 3.181463 CGTATTCCCTCCGTCCCAAAATA 60.181 47.826 0.00 0.00 0.00 1.40
1596 2132 4.683942 CGTATTCCCTCCGTCCCAAAATAA 60.684 45.833 0.00 0.00 0.00 1.40
1597 2133 3.359695 TTCCCTCCGTCCCAAAATAAG 57.640 47.619 0.00 0.00 0.00 1.73
1598 2134 2.271777 TCCCTCCGTCCCAAAATAAGT 58.728 47.619 0.00 0.00 0.00 2.24
1599 2135 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
1600 2136 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
1601 2137 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
1602 2138 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
1603 2139 3.933332 CTCCGTCCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
1604 2140 3.325425 TCCGTCCCAAAATAAGTGTCTCA 59.675 43.478 0.00 0.00 0.00 3.27
1605 2141 4.069304 CCGTCCCAAAATAAGTGTCTCAA 58.931 43.478 0.00 0.00 0.00 3.02
1606 2142 4.154195 CCGTCCCAAAATAAGTGTCTCAAG 59.846 45.833 0.00 0.00 0.00 3.02
1607 2143 4.378459 CGTCCCAAAATAAGTGTCTCAAGC 60.378 45.833 0.00 0.00 0.00 4.01
1608 2144 4.762251 GTCCCAAAATAAGTGTCTCAAGCT 59.238 41.667 0.00 0.00 0.00 3.74
1609 2145 5.241728 GTCCCAAAATAAGTGTCTCAAGCTT 59.758 40.000 0.00 0.00 0.00 3.74
1610 2146 6.430000 GTCCCAAAATAAGTGTCTCAAGCTTA 59.570 38.462 0.00 0.00 0.00 3.09
1611 2147 7.001674 TCCCAAAATAAGTGTCTCAAGCTTAA 58.998 34.615 0.00 0.00 0.00 1.85
1612 2148 7.669722 TCCCAAAATAAGTGTCTCAAGCTTAAT 59.330 33.333 0.00 0.00 0.00 1.40
1613 2149 8.956426 CCCAAAATAAGTGTCTCAAGCTTAATA 58.044 33.333 0.00 0.00 0.00 0.98
1614 2150 9.774742 CCAAAATAAGTGTCTCAAGCTTAATAC 57.225 33.333 0.00 0.00 0.00 1.89
1618 2154 9.726438 AATAAGTGTCTCAAGCTTAATACAACT 57.274 29.630 0.00 0.00 0.00 3.16
1619 2155 9.726438 ATAAGTGTCTCAAGCTTAATACAACTT 57.274 29.630 0.00 8.06 0.00 2.66
1620 2156 8.451908 AAGTGTCTCAAGCTTAATACAACTTT 57.548 30.769 0.00 0.00 0.00 2.66
1621 2157 7.865707 AGTGTCTCAAGCTTAATACAACTTTG 58.134 34.615 0.00 0.00 0.00 2.77
1622 2158 7.499232 AGTGTCTCAAGCTTAATACAACTTTGT 59.501 33.333 0.00 0.00 44.86 2.83
1623 2159 7.587757 GTGTCTCAAGCTTAATACAACTTTGTG 59.412 37.037 0.00 0.00 42.31 3.33
1624 2160 6.578919 GTCTCAAGCTTAATACAACTTTGTGC 59.421 38.462 0.00 0.00 42.31 4.57
1625 2161 6.486657 TCTCAAGCTTAATACAACTTTGTGCT 59.513 34.615 0.00 1.88 42.31 4.40
1626 2162 7.659799 TCTCAAGCTTAATACAACTTTGTGCTA 59.340 33.333 0.00 0.00 42.31 3.49
1627 2163 7.806690 TCAAGCTTAATACAACTTTGTGCTAG 58.193 34.615 0.00 0.00 42.31 3.42
1628 2164 7.659799 TCAAGCTTAATACAACTTTGTGCTAGA 59.340 33.333 0.00 0.00 42.31 2.43
1629 2165 7.602517 AGCTTAATACAACTTTGTGCTAGAG 57.397 36.000 4.82 0.00 42.31 2.43
1630 2166 7.162082 AGCTTAATACAACTTTGTGCTAGAGT 58.838 34.615 4.82 0.00 42.31 3.24
1631 2167 7.661847 AGCTTAATACAACTTTGTGCTAGAGTT 59.338 33.333 4.82 0.00 42.31 3.01
1636 2172 5.344207 CAACTTTGTGCTAGAGTTGGTAC 57.656 43.478 11.59 0.00 43.94 3.34
1637 2173 4.682778 ACTTTGTGCTAGAGTTGGTACA 57.317 40.909 0.00 0.00 0.00 2.90
1656 2192 7.925993 TGGTACAAAGTTGAGACACTTATTTG 58.074 34.615 0.00 0.00 35.87 2.32
1657 2193 7.012894 TGGTACAAAGTTGAGACACTTATTTGG 59.987 37.037 0.00 0.00 35.87 3.28
1658 2194 6.391227 ACAAAGTTGAGACACTTATTTGGG 57.609 37.500 0.00 0.00 35.87 4.12
1659 2195 6.126409 ACAAAGTTGAGACACTTATTTGGGA 58.874 36.000 0.00 0.00 35.87 4.37
1660 2196 6.039382 ACAAAGTTGAGACACTTATTTGGGAC 59.961 38.462 0.00 0.00 35.87 4.46
1661 2197 4.315803 AGTTGAGACACTTATTTGGGACG 58.684 43.478 0.00 0.00 0.00 4.79
1662 2198 3.328382 TGAGACACTTATTTGGGACGG 57.672 47.619 0.00 0.00 0.00 4.79
1663 2199 2.901192 TGAGACACTTATTTGGGACGGA 59.099 45.455 0.00 0.00 0.00 4.69
1664 2200 3.056107 TGAGACACTTATTTGGGACGGAG 60.056 47.826 0.00 0.00 0.00 4.63
1665 2201 3.170717 AGACACTTATTTGGGACGGAGA 58.829 45.455 0.00 0.00 0.00 3.71
1666 2202 3.195825 AGACACTTATTTGGGACGGAGAG 59.804 47.826 0.00 0.00 0.00 3.20
1667 2203 3.170717 ACACTTATTTGGGACGGAGAGA 58.829 45.455 0.00 0.00 0.00 3.10
1708 2258 7.015877 AGGCCATGTTTCTTGCAATATATTGAT 59.984 33.333 26.22 7.71 40.14 2.57
1923 2509 9.748708 CACAAAGAATTTACCAGAAAGAAATGA 57.251 29.630 0.00 0.00 35.03 2.57
1979 2566 5.888105 AGCATAAACATTTCTGACTCATGC 58.112 37.500 0.00 0.00 37.19 4.06
1987 2578 1.377725 CTGACTCATGCCACCACCC 60.378 63.158 0.00 0.00 0.00 4.61
2077 2832 3.889859 AACATGGGGCATACTCATCAT 57.110 42.857 0.00 0.00 0.00 2.45
2130 2885 6.033619 CGTCTCTTAAGATGTAAAACGTCCAG 59.966 42.308 5.44 0.00 34.73 3.86
2136 2891 0.759959 TGTAAAACGTCCAGCCTGGA 59.240 50.000 10.05 10.05 45.98 3.86
2178 2933 3.571590 GATCACTCCATGGTAGACCTCT 58.428 50.000 12.58 0.00 36.82 3.69
2221 2976 3.058914 ACACTGCAAAAGAGATACAACGC 60.059 43.478 0.00 0.00 0.00 4.84
2224 2979 4.082274 TGCAAAAGAGATACAACGCATG 57.918 40.909 0.00 0.00 0.00 4.06
2268 3023 4.755629 ACAAGCACTATCTGATGATGCATC 59.244 41.667 20.14 20.14 40.88 3.91
2329 3085 5.759059 TGGGAGCAAATGATTGAACTCTAT 58.241 37.500 0.00 0.00 38.94 1.98
2347 3103 1.821216 ATGAACTGGTAACCGCCAAG 58.179 50.000 0.00 0.00 38.18 3.61
2373 3129 6.702716 TCGACACTTTCAAGGGTTTATTTT 57.297 33.333 0.00 0.00 44.15 1.82
2396 3152 5.350633 TGTTCTCGGTTTAAAGAGTTCGAA 58.649 37.500 0.00 0.00 36.03 3.71
3400 5085 7.704271 AGCTTTTATTTAATTCTAACGAGCCC 58.296 34.615 0.00 0.00 0.00 5.19
3516 5213 2.935238 GCATATGGCTACCGGTATGTGG 60.935 54.545 16.25 4.33 40.25 4.17
3628 5334 6.410540 ACATCCATTTCTAGTCTCCAACTTC 58.589 40.000 0.00 0.00 39.55 3.01
3719 5426 7.072562 ACTTCCATTACTATCCAGATCTGAGT 58.927 38.462 24.62 20.19 0.00 3.41
3769 5477 0.820891 ATCCCATGCATCGCCTGTTC 60.821 55.000 0.00 0.00 0.00 3.18
3863 5580 0.468226 GGGGTCTAACATGATGCGGA 59.532 55.000 0.00 0.00 0.00 5.54
4029 6108 4.074970 CTCTAGTCCATTTGCAACTGGTT 58.925 43.478 28.87 21.67 34.03 3.67
4413 6515 5.410439 GTGAAAAGAAGTATGGCGGACTAAA 59.590 40.000 0.00 0.00 0.00 1.85
4721 6848 4.329256 GGAACCATAAGCTCACGAAACTAC 59.671 45.833 0.00 0.00 0.00 2.73
4860 6996 2.159142 GGGACCGACGATGTGAAAGTAT 60.159 50.000 0.00 0.00 0.00 2.12
5219 7375 8.318412 ACATTGTGTCTCATTGTTATACTGGTA 58.682 33.333 0.00 0.00 37.35 3.25
6163 8543 6.181206 AGCTTCTCAAAGAACTAGTTCCTT 57.819 37.500 28.05 20.53 40.33 3.36
6164 8544 6.596621 AGCTTCTCAAAGAACTAGTTCCTTT 58.403 36.000 28.05 22.79 40.33 3.11
6165 8545 7.736893 AGCTTCTCAAAGAACTAGTTCCTTTA 58.263 34.615 28.05 14.60 40.33 1.85
6331 8941 4.896482 CCTACCAGCACCTTCTCTTATACT 59.104 45.833 0.00 0.00 0.00 2.12
6332 8942 5.010213 CCTACCAGCACCTTCTCTTATACTC 59.990 48.000 0.00 0.00 0.00 2.59
6333 8943 3.707102 ACCAGCACCTTCTCTTATACTCC 59.293 47.826 0.00 0.00 0.00 3.85
6334 8944 3.070302 CCAGCACCTTCTCTTATACTCCC 59.930 52.174 0.00 0.00 0.00 4.30
6335 8945 3.964031 CAGCACCTTCTCTTATACTCCCT 59.036 47.826 0.00 0.00 0.00 4.20
6336 8946 4.038642 CAGCACCTTCTCTTATACTCCCTC 59.961 50.000 0.00 0.00 0.00 4.30
6337 8947 4.078863 AGCACCTTCTCTTATACTCCCTCT 60.079 45.833 0.00 0.00 0.00 3.69
6338 8948 4.038642 GCACCTTCTCTTATACTCCCTCTG 59.961 50.000 0.00 0.00 0.00 3.35
6339 8949 5.205056 CACCTTCTCTTATACTCCCTCTGT 58.795 45.833 0.00 0.00 0.00 3.41
6340 8950 5.300792 CACCTTCTCTTATACTCCCTCTGTC 59.699 48.000 0.00 0.00 0.00 3.51
6341 8951 4.830600 CCTTCTCTTATACTCCCTCTGTCC 59.169 50.000 0.00 0.00 0.00 4.02
6342 8952 4.456662 TCTCTTATACTCCCTCTGTCCC 57.543 50.000 0.00 0.00 0.00 4.46
6343 8953 3.792114 TCTCTTATACTCCCTCTGTCCCA 59.208 47.826 0.00 0.00 0.00 4.37
6344 8954 4.232122 TCTCTTATACTCCCTCTGTCCCAA 59.768 45.833 0.00 0.00 0.00 4.12
6345 8955 4.955335 TCTTATACTCCCTCTGTCCCAAA 58.045 43.478 0.00 0.00 0.00 3.28
6346 8956 5.347124 TCTTATACTCCCTCTGTCCCAAAA 58.653 41.667 0.00 0.00 0.00 2.44
6347 8957 5.970640 TCTTATACTCCCTCTGTCCCAAAAT 59.029 40.000 0.00 0.00 0.00 1.82
6348 8958 7.136885 TCTTATACTCCCTCTGTCCCAAAATA 58.863 38.462 0.00 0.00 0.00 1.40
6349 8959 7.626084 TCTTATACTCCCTCTGTCCCAAAATAA 59.374 37.037 0.00 0.00 0.00 1.40
6350 8960 4.576330 ACTCCCTCTGTCCCAAAATAAG 57.424 45.455 0.00 0.00 0.00 1.73
6351 8961 3.916989 ACTCCCTCTGTCCCAAAATAAGT 59.083 43.478 0.00 0.00 0.00 2.24
6352 8962 4.263506 ACTCCCTCTGTCCCAAAATAAGTG 60.264 45.833 0.00 0.00 0.00 3.16
6353 8963 3.655777 TCCCTCTGTCCCAAAATAAGTGT 59.344 43.478 0.00 0.00 0.00 3.55
6354 8964 4.010349 CCCTCTGTCCCAAAATAAGTGTC 58.990 47.826 0.00 0.00 0.00 3.67
6355 8965 4.263506 CCCTCTGTCCCAAAATAAGTGTCT 60.264 45.833 0.00 0.00 0.00 3.41
6356 8966 4.938226 CCTCTGTCCCAAAATAAGTGTCTC 59.062 45.833 0.00 0.00 0.00 3.36
6357 8967 5.513094 CCTCTGTCCCAAAATAAGTGTCTCA 60.513 44.000 0.00 0.00 0.00 3.27
6358 8968 5.935945 TCTGTCCCAAAATAAGTGTCTCAA 58.064 37.500 0.00 0.00 0.00 3.02
6359 8969 5.763204 TCTGTCCCAAAATAAGTGTCTCAAC 59.237 40.000 0.00 0.00 0.00 3.18
6360 8970 5.690865 TGTCCCAAAATAAGTGTCTCAACT 58.309 37.500 0.00 0.00 0.00 3.16
6361 8971 6.126409 TGTCCCAAAATAAGTGTCTCAACTT 58.874 36.000 0.00 0.00 42.89 2.66
6362 8972 6.605594 TGTCCCAAAATAAGTGTCTCAACTTT 59.394 34.615 0.00 0.00 40.77 2.66
6363 8973 6.918022 GTCCCAAAATAAGTGTCTCAACTTTG 59.082 38.462 0.00 0.00 40.77 2.77
6364 8974 6.605594 TCCCAAAATAAGTGTCTCAACTTTGT 59.394 34.615 0.00 0.00 40.77 2.83
6365 8975 7.776030 TCCCAAAATAAGTGTCTCAACTTTGTA 59.224 33.333 0.00 0.00 40.77 2.41
6366 8976 7.860872 CCCAAAATAAGTGTCTCAACTTTGTAC 59.139 37.037 0.00 0.00 40.77 2.90
6367 8977 8.621286 CCAAAATAAGTGTCTCAACTTTGTACT 58.379 33.333 0.00 0.00 40.77 2.73
6373 8983 8.788325 AAGTGTCTCAACTTTGTACTAACTTT 57.212 30.769 0.00 0.00 37.05 2.66
6374 8984 9.880157 AAGTGTCTCAACTTTGTACTAACTTTA 57.120 29.630 0.00 0.00 37.05 1.85
6375 8985 9.530633 AGTGTCTCAACTTTGTACTAACTTTAG 57.469 33.333 0.00 0.00 36.82 1.85
6376 8986 9.525409 GTGTCTCAACTTTGTACTAACTTTAGA 57.475 33.333 2.95 0.00 34.84 2.10
6394 9004 8.959705 ACTTTAGAACAAAGTTGTACTAAGCT 57.040 30.769 0.00 0.00 41.31 3.74
6395 9005 9.392259 ACTTTAGAACAAAGTTGTACTAAGCTT 57.608 29.630 3.48 3.48 41.31 3.74
6396 9006 9.651718 CTTTAGAACAAAGTTGTACTAAGCTTG 57.348 33.333 9.86 1.57 41.31 4.01
6397 9007 8.951787 TTAGAACAAAGTTGTACTAAGCTTGA 57.048 30.769 9.86 0.00 41.31 3.02
6398 9008 7.484035 AGAACAAAGTTGTACTAAGCTTGAG 57.516 36.000 9.86 5.36 41.31 3.02
6399 9009 7.272978 AGAACAAAGTTGTACTAAGCTTGAGA 58.727 34.615 9.86 0.00 41.31 3.27
6400 9010 6.846325 ACAAAGTTGTACTAAGCTTGAGAC 57.154 37.500 9.86 4.39 40.16 3.36
6401 9011 6.346096 ACAAAGTTGTACTAAGCTTGAGACA 58.654 36.000 9.86 7.12 40.16 3.41
6402 9012 6.258068 ACAAAGTTGTACTAAGCTTGAGACAC 59.742 38.462 9.86 7.18 40.16 3.67
6403 9013 5.793030 AGTTGTACTAAGCTTGAGACACT 57.207 39.130 9.86 7.29 0.00 3.55
6404 9014 6.163135 AGTTGTACTAAGCTTGAGACACTT 57.837 37.500 9.86 0.00 0.00 3.16
6405 9015 7.286215 AGTTGTACTAAGCTTGAGACACTTA 57.714 36.000 9.86 0.00 0.00 2.24
6406 9016 7.897864 AGTTGTACTAAGCTTGAGACACTTAT 58.102 34.615 9.86 0.00 0.00 1.73
6407 9017 8.368668 AGTTGTACTAAGCTTGAGACACTTATT 58.631 33.333 9.86 0.00 0.00 1.40
6408 9018 8.989980 GTTGTACTAAGCTTGAGACACTTATTT 58.010 33.333 9.86 0.00 0.00 1.40
6409 9019 9.555727 TTGTACTAAGCTTGAGACACTTATTTT 57.444 29.630 9.86 0.00 0.00 1.82
6410 9020 8.988934 TGTACTAAGCTTGAGACACTTATTTTG 58.011 33.333 9.86 0.00 0.00 2.44
6411 9021 7.440523 ACTAAGCTTGAGACACTTATTTTGG 57.559 36.000 9.86 0.00 0.00 3.28
6412 9022 5.712152 AAGCTTGAGACACTTATTTTGGG 57.288 39.130 0.00 0.00 0.00 4.12
6413 9023 4.985538 AGCTTGAGACACTTATTTTGGGA 58.014 39.130 0.00 0.00 0.00 4.37
6414 9024 4.762251 AGCTTGAGACACTTATTTTGGGAC 59.238 41.667 0.00 0.00 0.00 4.46
6415 9025 4.378459 GCTTGAGACACTTATTTTGGGACG 60.378 45.833 0.00 0.00 0.00 4.79
6416 9026 3.670625 TGAGACACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 0.00 4.79
6417 9027 3.325425 TGAGACACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 0.00 4.69
6418 9028 3.933332 GAGACACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 0.00 4.63
6419 9029 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
6420 9030 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
6421 9031 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
6422 9032 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
6423 9033 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
6424 9034 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
6425 9035 0.978907 TTTTGGGACGGAGGGAGTAC 59.021 55.000 0.00 0.00 0.00 2.73
6433 9043 4.462132 GGGACGGAGGGAGTACTATTATTC 59.538 50.000 0.00 0.00 0.00 1.75
6609 9223 8.359642 TCTTATTTCAGCAACAGCAGTTATTTT 58.640 29.630 0.00 0.00 35.85 1.82
6802 9422 6.704310 AGCAGTTCCAAAGCAATATGATTTT 58.296 32.000 0.00 0.00 33.20 1.82
7098 9729 0.518636 CCTTGTCTGTTGCGACCATG 59.481 55.000 0.45 0.00 32.97 3.66
7216 9853 3.728864 GCGGAGTTGTGTTAATCATGCAG 60.729 47.826 0.00 0.00 0.00 4.41
7556 10193 7.734538 AAACTAACAACGTTCAATGTTTCAG 57.265 32.000 8.51 4.35 40.14 3.02
7569 10206 9.599322 GTTCAATGTTTCAGTTAGTGAAGTATG 57.401 33.333 2.59 2.62 46.09 2.39
7607 10279 9.447040 CATGTAAGAATGTCTGCAAATGATTAG 57.553 33.333 0.00 0.00 0.00 1.73
7670 10342 4.713814 ACATAGCTGATGGAAGTTCAGAGA 59.286 41.667 5.01 0.00 42.63 3.10
7675 10347 5.068987 AGCTGATGGAAGTTCAGAGATCTAC 59.931 44.000 5.01 0.00 42.63 2.59
7733 10405 4.045104 GACGCTCACTACCAATCATACAG 58.955 47.826 0.00 0.00 0.00 2.74
7760 10442 4.393680 CCCGATTGTTAAAGAAACCGATGA 59.606 41.667 0.00 0.00 37.27 2.92
7761 10443 5.106475 CCCGATTGTTAAAGAAACCGATGAA 60.106 40.000 0.00 0.00 37.27 2.57
7762 10444 5.793457 CCGATTGTTAAAGAAACCGATGAAC 59.207 40.000 0.00 0.00 37.27 3.18
7763 10445 6.367421 CGATTGTTAAAGAAACCGATGAACA 58.633 36.000 0.00 0.00 37.27 3.18
7764 10446 6.519761 CGATTGTTAAAGAAACCGATGAACAG 59.480 38.462 0.00 0.00 37.27 3.16
7765 10447 6.687081 TTGTTAAAGAAACCGATGAACAGT 57.313 33.333 0.00 0.00 37.27 3.55
7766 10448 7.789273 TTGTTAAAGAAACCGATGAACAGTA 57.211 32.000 0.00 0.00 37.27 2.74
7767 10449 7.972832 TGTTAAAGAAACCGATGAACAGTAT 57.027 32.000 0.00 0.00 37.27 2.12
7768 10450 7.802738 TGTTAAAGAAACCGATGAACAGTATG 58.197 34.615 0.00 0.00 38.82 2.39
7769 10451 7.442969 TGTTAAAGAAACCGATGAACAGTATGT 59.557 33.333 0.00 0.00 45.12 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.002502 GTGGGAGCTTTACGGGCTT 60.003 57.895 0.00 0.00 40.40 4.35
2 3 2.669240 GTGGGAGCTTTACGGGCT 59.331 61.111 0.00 0.00 43.26 5.19
4 5 0.392595 GAAGGTGGGAGCTTTACGGG 60.393 60.000 0.00 0.00 35.86 5.28
5 6 0.739813 CGAAGGTGGGAGCTTTACGG 60.740 60.000 0.00 0.00 35.86 4.02
6 7 1.359459 GCGAAGGTGGGAGCTTTACG 61.359 60.000 0.00 0.00 35.86 3.18
7 8 1.359459 CGCGAAGGTGGGAGCTTTAC 61.359 60.000 0.00 0.00 35.86 2.01
8 9 1.079405 CGCGAAGGTGGGAGCTTTA 60.079 57.895 0.00 0.00 35.86 1.85
9 10 2.358737 CGCGAAGGTGGGAGCTTT 60.359 61.111 0.00 0.00 35.86 3.51
53 54 3.710722 AGCTTGGACAGGGAGCGG 61.711 66.667 0.00 0.00 41.19 5.52
54 55 2.435586 CAGCTTGGACAGGGAGCG 60.436 66.667 0.00 0.00 41.19 5.03
55 56 2.749441 GCAGCTTGGACAGGGAGC 60.749 66.667 0.00 0.00 36.68 4.70
56 57 1.078567 GAGCAGCTTGGACAGGGAG 60.079 63.158 0.00 0.00 0.00 4.30
57 58 2.596851 GGAGCAGCTTGGACAGGGA 61.597 63.158 0.00 0.00 0.00 4.20
58 59 2.045536 GGAGCAGCTTGGACAGGG 60.046 66.667 0.00 0.00 0.00 4.45
59 60 2.045536 GGGAGCAGCTTGGACAGG 60.046 66.667 0.00 0.00 0.00 4.00
60 61 2.045536 GGGGAGCAGCTTGGACAG 60.046 66.667 0.00 0.00 0.00 3.51
61 62 3.650950 GGGGGAGCAGCTTGGACA 61.651 66.667 0.00 0.00 0.00 4.02
62 63 4.785453 CGGGGGAGCAGCTTGGAC 62.785 72.222 0.00 0.00 0.00 4.02
77 78 4.988598 ACGAAGCCCACTGTGCGG 62.989 66.667 1.29 6.61 0.00 5.69
78 79 3.716006 CACGAAGCCCACTGTGCG 61.716 66.667 1.29 2.74 0.00 5.34
79 80 3.357079 CCACGAAGCCCACTGTGC 61.357 66.667 1.29 0.00 0.00 4.57
80 81 3.357079 GCCACGAAGCCCACTGTG 61.357 66.667 0.00 0.00 0.00 3.66
89 90 2.802667 CTTCATCGCGGCCACGAAG 61.803 63.158 21.28 16.38 46.59 3.79
90 91 2.813474 CTTCATCGCGGCCACGAA 60.813 61.111 21.28 0.88 46.59 3.85
101 102 4.235762 TAGCGGGCCGGCTTCATC 62.236 66.667 38.59 9.02 41.39 2.92
102 103 4.241555 CTAGCGGGCCGGCTTCAT 62.242 66.667 38.59 20.07 41.39 2.57
111 112 2.844839 ATCTGGGTCCTAGCGGGC 60.845 66.667 0.00 0.00 34.39 6.13
112 113 2.511452 CCATCTGGGTCCTAGCGGG 61.511 68.421 0.00 0.00 0.00 6.13
113 114 3.142393 CCATCTGGGTCCTAGCGG 58.858 66.667 0.00 0.00 0.00 5.52
123 124 2.541907 CCCATAGGGCCCCATCTGG 61.542 68.421 21.43 19.47 35.35 3.86
124 125 3.174313 CCCATAGGGCCCCATCTG 58.826 66.667 21.43 10.92 35.35 2.90
133 134 1.495579 CCAGATCTGGGCCCATAGGG 61.496 65.000 31.14 18.62 46.81 3.53
134 135 2.073232 CCAGATCTGGGCCCATAGG 58.927 63.158 31.14 18.55 46.81 2.57
173 174 4.715523 AACCGATGGTGCCGGGTG 62.716 66.667 2.18 0.00 46.63 4.61
177 178 2.895372 GGCTAACCGATGGTGCCG 60.895 66.667 2.03 0.00 35.56 5.69
178 179 2.516225 GGGCTAACCGATGGTGCC 60.516 66.667 8.44 8.44 42.06 5.01
179 180 2.516225 GGGGCTAACCGATGGTGC 60.516 66.667 0.00 0.00 41.60 5.01
261 262 1.071471 GGTGATGATAGGCCGGTGG 59.929 63.158 1.90 0.00 0.00 4.61
262 263 1.300931 CGGTGATGATAGGCCGGTG 60.301 63.158 1.90 0.00 40.45 4.94
263 264 3.138625 CGGTGATGATAGGCCGGT 58.861 61.111 1.90 0.00 40.45 5.28
264 265 2.357517 GCGGTGATGATAGGCCGG 60.358 66.667 0.00 0.00 43.90 6.13
265 266 2.357517 GGCGGTGATGATAGGCCG 60.358 66.667 0.00 0.00 46.17 6.13
266 267 2.357517 CGGCGGTGATGATAGGCC 60.358 66.667 0.00 0.00 40.36 5.19
267 268 2.357517 CCGGCGGTGATGATAGGC 60.358 66.667 19.97 0.00 0.00 3.93
268 269 2.357517 GCCGGCGGTGATGATAGG 60.358 66.667 28.82 0.00 0.00 2.57
269 270 2.734723 CGCCGGCGGTGATGATAG 60.735 66.667 40.50 8.79 34.74 2.08
270 271 4.961511 GCGCCGGCGGTGATGATA 62.962 66.667 45.81 0.00 40.19 2.15
292 293 4.667935 TTCCTCCTTCCCGGGGCA 62.668 66.667 23.50 6.92 0.00 5.36
293 294 4.111053 GTTCCTCCTTCCCGGGGC 62.111 72.222 23.50 0.00 0.00 5.80
294 295 3.782443 CGTTCCTCCTTCCCGGGG 61.782 72.222 23.50 6.77 0.00 5.73
295 296 3.001406 ACGTTCCTCCTTCCCGGG 61.001 66.667 16.85 16.85 0.00 5.73
296 297 2.264794 CACGTTCCTCCTTCCCGG 59.735 66.667 0.00 0.00 0.00 5.73
297 298 2.434359 GCACGTTCCTCCTTCCCG 60.434 66.667 0.00 0.00 0.00 5.14
298 299 2.434359 CGCACGTTCCTCCTTCCC 60.434 66.667 0.00 0.00 0.00 3.97
299 300 3.119096 GCGCACGTTCCTCCTTCC 61.119 66.667 0.30 0.00 0.00 3.46
300 301 2.357034 TGCGCACGTTCCTCCTTC 60.357 61.111 5.66 0.00 0.00 3.46
301 302 2.357517 CTGCGCACGTTCCTCCTT 60.358 61.111 5.66 0.00 0.00 3.36
302 303 4.379243 CCTGCGCACGTTCCTCCT 62.379 66.667 5.66 0.00 0.00 3.69
303 304 3.291101 TACCTGCGCACGTTCCTCC 62.291 63.158 17.06 0.00 0.00 4.30
304 305 2.092882 GTACCTGCGCACGTTCCTC 61.093 63.158 17.06 3.35 0.00 3.71
305 306 2.048503 GTACCTGCGCACGTTCCT 60.049 61.111 17.06 0.00 0.00 3.36
306 307 3.475774 CGTACCTGCGCACGTTCC 61.476 66.667 17.06 7.85 33.56 3.62
307 308 2.429571 TCGTACCTGCGCACGTTC 60.430 61.111 17.06 11.20 39.18 3.95
308 309 2.410638 TTCTCGTACCTGCGCACGTT 62.411 55.000 17.06 1.58 39.18 3.99
309 310 2.797866 CTTCTCGTACCTGCGCACGT 62.798 60.000 16.16 16.16 39.18 4.49
310 311 2.126618 TTCTCGTACCTGCGCACG 60.127 61.111 5.66 9.27 39.48 5.34
311 312 1.071567 GTCTTCTCGTACCTGCGCAC 61.072 60.000 5.66 0.00 0.00 5.34
312 313 1.211969 GTCTTCTCGTACCTGCGCA 59.788 57.895 10.98 10.98 0.00 6.09
313 314 1.516603 GGTCTTCTCGTACCTGCGC 60.517 63.158 0.00 0.00 32.72 6.09
314 315 1.139095 GGGTCTTCTCGTACCTGCG 59.861 63.158 0.00 0.00 35.97 5.18
315 316 1.139095 CGGGTCTTCTCGTACCTGC 59.861 63.158 0.00 0.00 35.43 4.85
316 317 1.139095 GCGGGTCTTCTCGTACCTG 59.861 63.158 0.00 0.00 43.80 4.00
317 318 2.050934 GGCGGGTCTTCTCGTACCT 61.051 63.158 0.00 0.00 35.97 3.08
318 319 2.493501 GGCGGGTCTTCTCGTACC 59.506 66.667 0.00 0.00 34.85 3.34
319 320 2.101770 CGGCGGGTCTTCTCGTAC 59.898 66.667 0.00 0.00 0.00 3.67
320 321 2.046023 TCGGCGGGTCTTCTCGTA 60.046 61.111 7.21 0.00 0.00 3.43
321 322 3.745803 GTCGGCGGGTCTTCTCGT 61.746 66.667 7.21 0.00 0.00 4.18
322 323 4.831307 CGTCGGCGGGTCTTCTCG 62.831 72.222 7.21 0.00 0.00 4.04
341 342 4.742201 CTGGCCCGAGTGGTGTCG 62.742 72.222 0.00 0.00 39.77 4.35
342 343 2.579684 GATCTGGCCCGAGTGGTGTC 62.580 65.000 0.00 0.00 36.04 3.67
343 344 2.607750 ATCTGGCCCGAGTGGTGT 60.608 61.111 0.00 0.00 36.04 4.16
344 345 2.187946 GATCTGGCCCGAGTGGTG 59.812 66.667 0.00 0.00 36.04 4.17
345 346 3.083997 GGATCTGGCCCGAGTGGT 61.084 66.667 0.00 0.00 36.04 4.16
417 418 3.003763 AACGTGAGCCTCCTCCCC 61.004 66.667 0.00 0.00 37.29 4.81
418 419 2.266055 CAACGTGAGCCTCCTCCC 59.734 66.667 0.00 0.00 37.29 4.30
419 420 2.435059 GCAACGTGAGCCTCCTCC 60.435 66.667 2.01 0.00 37.29 4.30
482 483 2.194868 CTTATTGGGCCCCGTCCC 59.805 66.667 22.27 0.00 46.73 4.46
483 484 1.347243 TACCTTATTGGGCCCCGTCC 61.347 60.000 22.27 0.00 41.11 4.79
484 485 0.179037 GTACCTTATTGGGCCCCGTC 60.179 60.000 22.27 0.00 41.11 4.79
485 486 0.915387 TGTACCTTATTGGGCCCCGT 60.915 55.000 22.27 10.68 41.11 5.28
486 487 0.476771 ATGTACCTTATTGGGCCCCG 59.523 55.000 22.27 1.92 41.11 5.73
487 488 2.594131 GAATGTACCTTATTGGGCCCC 58.406 52.381 22.27 0.85 41.11 5.80
488 489 2.177016 AGGAATGTACCTTATTGGGCCC 59.823 50.000 17.59 17.59 41.11 5.80
489 490 3.595190 AGGAATGTACCTTATTGGGCC 57.405 47.619 0.00 0.00 41.11 5.80
490 491 4.072839 GCTAGGAATGTACCTTATTGGGC 58.927 47.826 0.00 0.00 41.00 5.36
491 492 5.568620 AGCTAGGAATGTACCTTATTGGG 57.431 43.478 0.00 0.00 41.00 4.12
492 493 7.233757 AGTCTAGCTAGGAATGTACCTTATTGG 59.766 40.741 20.58 0.00 41.00 3.16
493 494 8.184304 AGTCTAGCTAGGAATGTACCTTATTG 57.816 38.462 20.58 0.00 41.00 1.90
494 495 9.878737 TTAGTCTAGCTAGGAATGTACCTTATT 57.121 33.333 20.58 0.00 41.00 1.40
495 496 9.299465 GTTAGTCTAGCTAGGAATGTACCTTAT 57.701 37.037 20.58 0.00 41.00 1.73
496 497 7.723172 GGTTAGTCTAGCTAGGAATGTACCTTA 59.277 40.741 20.58 0.00 41.00 2.69
497 498 6.550481 GGTTAGTCTAGCTAGGAATGTACCTT 59.450 42.308 20.58 0.00 41.00 3.50
498 499 6.069994 GGTTAGTCTAGCTAGGAATGTACCT 58.930 44.000 20.58 6.62 43.32 3.08
499 500 6.016108 CAGGTTAGTCTAGCTAGGAATGTACC 60.016 46.154 20.58 17.90 0.00 3.34
500 501 6.016108 CCAGGTTAGTCTAGCTAGGAATGTAC 60.016 46.154 20.58 10.09 0.00 2.90
501 502 6.069331 CCAGGTTAGTCTAGCTAGGAATGTA 58.931 44.000 20.58 0.00 0.00 2.29
502 503 4.896482 CCAGGTTAGTCTAGCTAGGAATGT 59.104 45.833 20.58 4.05 0.00 2.71
503 504 4.896482 ACCAGGTTAGTCTAGCTAGGAATG 59.104 45.833 20.58 9.67 0.00 2.67
504 505 5.145513 ACCAGGTTAGTCTAGCTAGGAAT 57.854 43.478 20.58 9.23 0.00 3.01
517 518 4.906618 TCCTTAGCTTTCAACCAGGTTAG 58.093 43.478 3.89 0.00 0.00 2.34
636 637 6.772605 AGCCATATCTATGTGCATTACTTGA 58.227 36.000 0.00 0.00 34.47 3.02
657 662 4.102035 AGAGCAAATTTCGAATTGAGCC 57.898 40.909 14.20 6.54 0.00 4.70
669 674 6.112927 AGAGAGTCAGAGAAAGAGCAAATT 57.887 37.500 0.00 0.00 0.00 1.82
676 681 3.509575 GCAAGGAGAGAGTCAGAGAAAGA 59.490 47.826 0.00 0.00 0.00 2.52
682 687 2.166829 GAGTGCAAGGAGAGAGTCAGA 58.833 52.381 0.00 0.00 0.00 3.27
686 691 1.271102 GAACGAGTGCAAGGAGAGAGT 59.729 52.381 0.00 0.00 0.00 3.24
694 699 2.341257 AGTAGCATGAACGAGTGCAAG 58.659 47.619 0.00 0.00 43.63 4.01
697 702 2.876091 TGTAGTAGCATGAACGAGTGC 58.124 47.619 0.00 0.00 41.57 4.40
792 1096 1.134753 CTAGCTGCCTGTCAGTCTCAG 59.865 57.143 0.00 4.65 44.66 3.35
793 1097 1.180907 CTAGCTGCCTGTCAGTCTCA 58.819 55.000 0.00 0.00 44.66 3.27
794 1098 0.179113 GCTAGCTGCCTGTCAGTCTC 60.179 60.000 7.70 0.00 44.66 3.36
810 1114 0.037139 TTTGGGTTCTTAGCGCGCTA 60.037 50.000 35.48 35.48 0.00 4.26
811 1115 0.887387 TTTTGGGTTCTTAGCGCGCT 60.887 50.000 38.01 38.01 0.00 5.92
814 1118 0.596082 TGCTTTTGGGTTCTTAGCGC 59.404 50.000 0.00 0.00 34.65 5.92
815 1119 1.401539 GCTGCTTTTGGGTTCTTAGCG 60.402 52.381 0.00 0.00 34.65 4.26
816 1120 1.613437 TGCTGCTTTTGGGTTCTTAGC 59.387 47.619 0.00 0.00 0.00 3.09
817 1121 3.858503 GCTTGCTGCTTTTGGGTTCTTAG 60.859 47.826 0.00 0.00 38.95 2.18
818 1122 2.035832 GCTTGCTGCTTTTGGGTTCTTA 59.964 45.455 0.00 0.00 38.95 2.10
820 1124 0.390492 GCTTGCTGCTTTTGGGTTCT 59.610 50.000 0.00 0.00 38.95 3.01
821 1125 2.904664 GCTTGCTGCTTTTGGGTTC 58.095 52.632 0.00 0.00 38.95 3.62
856 1170 0.179150 CTAGCAGTGCGTCTCTGTCC 60.179 60.000 10.00 0.00 35.60 4.02
896 1214 6.951256 TGTGATGATCTTATATAGCGCAAC 57.049 37.500 11.47 0.00 0.00 4.17
956 1307 6.820656 ACTTAGGAGTAATTGATTGACTGCAG 59.179 38.462 13.48 13.48 34.29 4.41
973 1332 8.560374 GCTGGTGCTAATAAATTAACTTAGGAG 58.440 37.037 0.00 0.00 36.03 3.69
975 1334 8.220755 TGCTGGTGCTAATAAATTAACTTAGG 57.779 34.615 0.00 0.00 40.48 2.69
976 1335 9.669353 CATGCTGGTGCTAATAAATTAACTTAG 57.331 33.333 0.00 0.00 40.48 2.18
1012 1371 1.874345 CGGTTCCTGGTAGTGTCGCT 61.874 60.000 0.00 0.00 0.00 4.93
1158 1517 1.349067 AGAACTCCTTGTAGGGCGTT 58.651 50.000 0.00 0.00 35.59 4.84
1237 1628 7.468768 CGCTGAAATGAGTGGATCTACTAAGTA 60.469 40.741 12.23 0.00 0.00 2.24
1238 1629 6.578023 GCTGAAATGAGTGGATCTACTAAGT 58.422 40.000 12.23 0.47 0.00 2.24
1239 1630 5.689514 CGCTGAAATGAGTGGATCTACTAAG 59.310 44.000 12.23 4.79 0.00 2.18
1240 1631 5.359860 TCGCTGAAATGAGTGGATCTACTAA 59.640 40.000 12.23 5.05 0.00 2.24
1249 1640 6.851222 ATTAACTATCGCTGAAATGAGTGG 57.149 37.500 0.00 0.00 0.00 4.00
1274 1665 7.463961 AAACATATATAGTACTCCCGTCTGG 57.536 40.000 0.00 0.00 0.00 3.86
1276 1667 7.232941 AGCAAAACATATATAGTACTCCCGTCT 59.767 37.037 0.00 0.00 0.00 4.18
1287 1678 8.441608 GTGAGATGCAGAGCAAAACATATATAG 58.558 37.037 0.00 0.00 43.62 1.31
1389 1782 7.386851 AGTGTTATACAGTAACAAGATGCACT 58.613 34.615 0.00 0.00 38.90 4.40
1564 2100 1.207329 GGAGGGAATACGTGTGAGCTT 59.793 52.381 0.00 0.00 0.00 3.74
1577 2113 2.645797 ACTTATTTTGGGACGGAGGGAA 59.354 45.455 0.00 0.00 0.00 3.97
1579 2115 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
1580 2116 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
1581 2117 3.933332 GAGACACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 0.00 4.63
1582 2118 3.325425 TGAGACACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 0.00 4.69
1583 2119 3.670625 TGAGACACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 0.00 4.79
1584 2120 4.378459 GCTTGAGACACTTATTTTGGGACG 60.378 45.833 0.00 0.00 0.00 4.79
1585 2121 4.762251 AGCTTGAGACACTTATTTTGGGAC 59.238 41.667 0.00 0.00 0.00 4.46
1586 2122 4.985538 AGCTTGAGACACTTATTTTGGGA 58.014 39.130 0.00 0.00 0.00 4.37
1587 2123 5.712152 AAGCTTGAGACACTTATTTTGGG 57.288 39.130 0.00 0.00 0.00 4.12
1588 2124 9.774742 GTATTAAGCTTGAGACACTTATTTTGG 57.225 33.333 9.86 0.00 0.00 3.28
1592 2128 9.726438 AGTTGTATTAAGCTTGAGACACTTATT 57.274 29.630 17.19 0.00 0.00 1.40
1593 2129 9.726438 AAGTTGTATTAAGCTTGAGACACTTAT 57.274 29.630 17.19 3.23 0.00 1.73
1594 2130 9.555727 AAAGTTGTATTAAGCTTGAGACACTTA 57.444 29.630 17.19 1.83 0.00 2.24
1595 2131 8.345565 CAAAGTTGTATTAAGCTTGAGACACTT 58.654 33.333 17.19 18.16 0.00 3.16
1596 2132 7.499232 ACAAAGTTGTATTAAGCTTGAGACACT 59.501 33.333 17.19 14.21 40.16 3.55
1597 2133 7.587757 CACAAAGTTGTATTAAGCTTGAGACAC 59.412 37.037 17.19 12.50 39.91 3.67
1598 2134 7.639039 CACAAAGTTGTATTAAGCTTGAGACA 58.361 34.615 14.00 14.00 39.91 3.41
1599 2135 6.578919 GCACAAAGTTGTATTAAGCTTGAGAC 59.421 38.462 9.86 9.33 39.91 3.36
1600 2136 6.486657 AGCACAAAGTTGTATTAAGCTTGAGA 59.513 34.615 9.86 0.00 39.91 3.27
1601 2137 6.672147 AGCACAAAGTTGTATTAAGCTTGAG 58.328 36.000 9.86 0.00 39.91 3.02
1602 2138 6.633500 AGCACAAAGTTGTATTAAGCTTGA 57.367 33.333 9.86 0.00 39.91 3.02
1603 2139 7.806690 TCTAGCACAAAGTTGTATTAAGCTTG 58.193 34.615 9.86 8.93 39.91 4.01
1604 2140 7.661847 ACTCTAGCACAAAGTTGTATTAAGCTT 59.338 33.333 3.48 3.48 39.91 3.74
1605 2141 7.162082 ACTCTAGCACAAAGTTGTATTAAGCT 58.838 34.615 9.88 9.88 39.91 3.74
1606 2142 7.365840 ACTCTAGCACAAAGTTGTATTAAGC 57.634 36.000 0.00 0.00 39.91 3.09
1607 2143 8.230486 CCAACTCTAGCACAAAGTTGTATTAAG 58.770 37.037 16.00 1.63 45.32 1.85
1608 2144 7.717875 ACCAACTCTAGCACAAAGTTGTATTAA 59.282 33.333 16.00 0.00 45.32 1.40
1609 2145 7.221450 ACCAACTCTAGCACAAAGTTGTATTA 58.779 34.615 16.00 0.00 45.32 0.98
1610 2146 6.062095 ACCAACTCTAGCACAAAGTTGTATT 58.938 36.000 16.00 2.71 45.32 1.89
1611 2147 5.621193 ACCAACTCTAGCACAAAGTTGTAT 58.379 37.500 16.00 5.48 45.32 2.29
1612 2148 5.031066 ACCAACTCTAGCACAAAGTTGTA 57.969 39.130 16.00 0.00 45.32 2.41
1613 2149 3.886123 ACCAACTCTAGCACAAAGTTGT 58.114 40.909 16.00 0.00 45.32 3.32
1614 2150 4.814234 TGTACCAACTCTAGCACAAAGTTG 59.186 41.667 12.21 12.21 45.99 3.16
1615 2151 5.031066 TGTACCAACTCTAGCACAAAGTT 57.969 39.130 0.00 0.00 33.63 2.66
1616 2152 4.682778 TGTACCAACTCTAGCACAAAGT 57.317 40.909 0.00 0.00 0.00 2.66
1617 2153 5.990408 CTTTGTACCAACTCTAGCACAAAG 58.010 41.667 9.74 9.74 43.46 2.77
1618 2154 5.433526 ACTTTGTACCAACTCTAGCACAAA 58.566 37.500 0.00 0.00 35.33 2.83
1619 2155 5.031066 ACTTTGTACCAACTCTAGCACAA 57.969 39.130 0.00 0.00 0.00 3.33
1620 2156 4.682778 ACTTTGTACCAACTCTAGCACA 57.317 40.909 0.00 0.00 0.00 4.57
1621 2157 5.054477 TCAACTTTGTACCAACTCTAGCAC 58.946 41.667 0.00 0.00 0.00 4.40
1622 2158 5.069914 TCTCAACTTTGTACCAACTCTAGCA 59.930 40.000 0.00 0.00 0.00 3.49
1623 2159 5.405873 GTCTCAACTTTGTACCAACTCTAGC 59.594 44.000 0.00 0.00 0.00 3.42
1624 2160 6.421202 GTGTCTCAACTTTGTACCAACTCTAG 59.579 42.308 0.00 0.00 0.00 2.43
1625 2161 6.097839 AGTGTCTCAACTTTGTACCAACTCTA 59.902 38.462 0.00 0.00 0.00 2.43
1626 2162 5.104900 AGTGTCTCAACTTTGTACCAACTCT 60.105 40.000 0.00 0.00 0.00 3.24
1627 2163 5.116882 AGTGTCTCAACTTTGTACCAACTC 58.883 41.667 0.00 0.00 0.00 3.01
1628 2164 5.099042 AGTGTCTCAACTTTGTACCAACT 57.901 39.130 0.00 0.00 0.00 3.16
1629 2165 5.813080 AAGTGTCTCAACTTTGTACCAAC 57.187 39.130 0.00 0.00 37.05 3.77
1630 2166 8.402472 CAAATAAGTGTCTCAACTTTGTACCAA 58.598 33.333 0.00 0.00 40.77 3.67
1631 2167 7.012894 CCAAATAAGTGTCTCAACTTTGTACCA 59.987 37.037 0.00 0.00 40.77 3.25
1632 2168 7.360361 CCAAATAAGTGTCTCAACTTTGTACC 58.640 38.462 0.00 0.00 40.77 3.34
1633 2169 7.227910 TCCCAAATAAGTGTCTCAACTTTGTAC 59.772 37.037 0.00 0.00 40.77 2.90
1634 2170 7.227910 GTCCCAAATAAGTGTCTCAACTTTGTA 59.772 37.037 0.00 0.00 40.77 2.41
1635 2171 6.039382 GTCCCAAATAAGTGTCTCAACTTTGT 59.961 38.462 0.00 0.00 40.77 2.83
1636 2172 6.438763 GTCCCAAATAAGTGTCTCAACTTTG 58.561 40.000 0.00 0.00 40.77 2.77
1637 2173 5.238650 CGTCCCAAATAAGTGTCTCAACTTT 59.761 40.000 0.00 0.00 40.77 2.66
1638 2174 4.755123 CGTCCCAAATAAGTGTCTCAACTT 59.245 41.667 0.00 0.00 42.89 2.66
1639 2175 4.315803 CGTCCCAAATAAGTGTCTCAACT 58.684 43.478 0.00 0.00 0.00 3.16
1640 2176 3.435671 CCGTCCCAAATAAGTGTCTCAAC 59.564 47.826 0.00 0.00 0.00 3.18
1641 2177 3.325425 TCCGTCCCAAATAAGTGTCTCAA 59.675 43.478 0.00 0.00 0.00 3.02
1642 2178 2.901192 TCCGTCCCAAATAAGTGTCTCA 59.099 45.455 0.00 0.00 0.00 3.27
1643 2179 3.194968 TCTCCGTCCCAAATAAGTGTCTC 59.805 47.826 0.00 0.00 0.00 3.36
1644 2180 3.170717 TCTCCGTCCCAAATAAGTGTCT 58.829 45.455 0.00 0.00 0.00 3.41
1645 2181 3.194968 TCTCTCCGTCCCAAATAAGTGTC 59.805 47.826 0.00 0.00 0.00 3.67
1646 2182 3.170717 TCTCTCCGTCCCAAATAAGTGT 58.829 45.455 0.00 0.00 0.00 3.55
1647 2183 3.195825 ACTCTCTCCGTCCCAAATAAGTG 59.804 47.826 0.00 0.00 0.00 3.16
1648 2184 3.442076 ACTCTCTCCGTCCCAAATAAGT 58.558 45.455 0.00 0.00 0.00 2.24
1649 2185 5.793030 ATACTCTCTCCGTCCCAAATAAG 57.207 43.478 0.00 0.00 0.00 1.73
1650 2186 6.837568 ACTAATACTCTCTCCGTCCCAAATAA 59.162 38.462 0.00 0.00 0.00 1.40
1651 2187 6.371278 ACTAATACTCTCTCCGTCCCAAATA 58.629 40.000 0.00 0.00 0.00 1.40
1652 2188 5.209659 ACTAATACTCTCTCCGTCCCAAAT 58.790 41.667 0.00 0.00 0.00 2.32
1653 2189 4.607239 ACTAATACTCTCTCCGTCCCAAA 58.393 43.478 0.00 0.00 0.00 3.28
1654 2190 4.205587 GACTAATACTCTCTCCGTCCCAA 58.794 47.826 0.00 0.00 0.00 4.12
1655 2191 3.201487 TGACTAATACTCTCTCCGTCCCA 59.799 47.826 0.00 0.00 0.00 4.37
1656 2192 3.818180 TGACTAATACTCTCTCCGTCCC 58.182 50.000 0.00 0.00 0.00 4.46
1657 2193 5.064558 TCATGACTAATACTCTCTCCGTCC 58.935 45.833 0.00 0.00 0.00 4.79
1658 2194 6.811253 ATCATGACTAATACTCTCTCCGTC 57.189 41.667 0.00 0.00 0.00 4.79
1659 2195 6.882140 CCTATCATGACTAATACTCTCTCCGT 59.118 42.308 0.00 0.00 0.00 4.69
1660 2196 6.183360 GCCTATCATGACTAATACTCTCTCCG 60.183 46.154 0.00 0.00 0.00 4.63
1661 2197 6.096282 GGCCTATCATGACTAATACTCTCTCC 59.904 46.154 0.00 0.00 0.00 3.71
1662 2198 6.661377 TGGCCTATCATGACTAATACTCTCTC 59.339 42.308 3.32 0.00 0.00 3.20
1663 2199 6.556639 TGGCCTATCATGACTAATACTCTCT 58.443 40.000 3.32 0.00 0.00 3.10
1664 2200 6.842437 TGGCCTATCATGACTAATACTCTC 57.158 41.667 3.32 0.00 0.00 3.20
1665 2201 6.728164 ACATGGCCTATCATGACTAATACTCT 59.272 38.462 3.32 0.00 45.30 3.24
1666 2202 6.940739 ACATGGCCTATCATGACTAATACTC 58.059 40.000 3.32 0.00 45.30 2.59
1667 2203 6.942163 ACATGGCCTATCATGACTAATACT 57.058 37.500 3.32 0.00 45.30 2.12
1708 2258 8.267894 AGAGCTGCAAGTTTAAAGGAGATATTA 58.732 33.333 1.02 0.00 35.30 0.98
1979 2566 2.040545 TGGTTACAACTATGGGTGGTGG 59.959 50.000 0.00 0.00 33.49 4.61
1987 2578 8.761497 CGGTGACTAATAATGGTTACAACTATG 58.239 37.037 0.00 0.00 29.51 2.23
2130 2885 3.740631 GGATCAATTCCAATTCCAGGC 57.259 47.619 0.00 0.00 44.74 4.85
2178 2933 9.729023 CAGTGTATGTCTGTTCATTGTTTTTAA 57.271 29.630 0.00 0.00 0.00 1.52
2221 2976 0.738975 CTCACCTGAAGGCATGCATG 59.261 55.000 22.70 22.70 39.32 4.06
2224 2979 0.321919 TGACTCACCTGAAGGCATGC 60.322 55.000 9.90 9.90 39.32 4.06
2268 3023 7.329962 TGGTTGATAATGGTATACGAATAAGCG 59.670 37.037 0.00 0.00 37.29 4.68
2329 3085 0.250553 CCTTGGCGGTTACCAGTTCA 60.251 55.000 1.13 0.00 41.82 3.18
2347 3103 2.474410 ACCCTTGAAAGTGTCGATCC 57.526 50.000 0.00 0.00 0.00 3.36
2373 3129 4.935702 TCGAACTCTTTAAACCGAGAACA 58.064 39.130 10.53 0.00 0.00 3.18
2396 3152 6.072508 ACGAGTGATGTTTTATCAGCATTTGT 60.073 34.615 0.00 0.00 36.17 2.83
3297 4972 1.601759 GCTTTGCAGGCTGACAGGA 60.602 57.895 20.86 7.61 0.00 3.86
3341 5016 5.127491 ACAGTGTACCTTCCAAAAATCGAA 58.873 37.500 0.00 0.00 0.00 3.71
3394 5078 1.813513 AGTTTCATGAAGTGGGCTCG 58.186 50.000 8.41 0.00 0.00 5.03
3400 5085 7.132694 TGCATAGTGTTAGTTTCATGAAGTG 57.867 36.000 8.41 0.00 0.00 3.16
3516 5213 4.532521 AGGGTATAGTATCAGTGGGAATGC 59.467 45.833 0.00 0.00 0.00 3.56
3527 5224 9.794719 AAAAGGAAAAGCATAGGGTATAGTATC 57.205 33.333 0.00 0.00 0.00 2.24
3535 5232 4.126520 TGGAAAAGGAAAAGCATAGGGT 57.873 40.909 0.00 0.00 0.00 4.34
3769 5477 2.825861 ACAAATGCTGCCTTTTCAGG 57.174 45.000 0.00 0.00 44.28 3.86
4070 6150 9.793259 AGTCACATATTAATGTTATAACCCCAG 57.207 33.333 13.01 0.00 44.07 4.45
4101 6200 2.300152 TGAAGTGTCTCCTGGTAGCAAG 59.700 50.000 0.00 0.00 0.00 4.01
4530 6642 9.013490 GCACATTTTATAGCATTTGTAGTTGAG 57.987 33.333 0.00 0.00 0.00 3.02
4539 6651 6.035368 TGTGGTGCACATTTTATAGCATTT 57.965 33.333 20.43 0.00 39.62 2.32
4860 6996 4.288366 TCTCTCTTCTCCTCTCTCTGTCAA 59.712 45.833 0.00 0.00 0.00 3.18
4893 7029 3.193691 TGGGCCAATATTTTGTACCAACG 59.806 43.478 2.13 0.00 35.21 4.10
4978 7126 3.841642 GTATGCGTACGGACTCCTC 57.158 57.895 18.39 0.00 0.00 3.71
5019 7168 1.593196 CCTTGTCTGGTTTTCGAGCA 58.407 50.000 0.00 0.00 0.00 4.26
5439 7600 4.322198 GCCTGAAATGGACATGTGATTGTT 60.322 41.667 1.15 0.00 0.00 2.83
5441 7602 3.446161 AGCCTGAAATGGACATGTGATTG 59.554 43.478 1.15 0.00 0.00 2.67
5442 7603 3.698040 GAGCCTGAAATGGACATGTGATT 59.302 43.478 1.15 0.00 0.00 2.57
5444 7605 2.306805 AGAGCCTGAAATGGACATGTGA 59.693 45.455 1.15 0.00 0.00 3.58
5683 8058 9.220906 TCCTGGACTATAATGTAAACCTTATGT 57.779 33.333 0.00 0.00 0.00 2.29
5719 8094 8.169977 TGGCATTTCTTCTATTATGGTCAATC 57.830 34.615 0.00 0.00 0.00 2.67
6104 8484 4.647853 AGTAGGGTTCACATGCTATACGAA 59.352 41.667 0.00 0.00 0.00 3.85
6165 8545 9.950496 GTCCACTATTATGTCCAATCTGATAAT 57.050 33.333 0.00 0.00 0.00 1.28
6206 8816 7.581213 TTCTTAGTATTAATTGCCCATGTGG 57.419 36.000 0.00 0.00 37.09 4.17
6331 8941 3.655777 ACACTTATTTTGGGACAGAGGGA 59.344 43.478 0.00 0.00 42.39 4.20
6332 8942 4.010349 GACACTTATTTTGGGACAGAGGG 58.990 47.826 0.00 0.00 42.39 4.30
6333 8943 4.911390 AGACACTTATTTTGGGACAGAGG 58.089 43.478 0.00 0.00 42.39 3.69
6334 8944 5.551233 TGAGACACTTATTTTGGGACAGAG 58.449 41.667 0.00 0.00 42.39 3.35
6335 8945 5.560722 TGAGACACTTATTTTGGGACAGA 57.439 39.130 0.00 0.00 42.39 3.41
6336 8946 5.765182 AGTTGAGACACTTATTTTGGGACAG 59.235 40.000 0.00 0.00 42.39 3.51
6337 8947 5.690865 AGTTGAGACACTTATTTTGGGACA 58.309 37.500 0.00 0.00 0.00 4.02
6338 8948 6.635030 AAGTTGAGACACTTATTTTGGGAC 57.365 37.500 0.00 0.00 35.10 4.46
6339 8949 6.605594 ACAAAGTTGAGACACTTATTTTGGGA 59.394 34.615 0.00 0.00 35.87 4.37
6340 8950 6.805713 ACAAAGTTGAGACACTTATTTTGGG 58.194 36.000 0.00 0.00 35.87 4.12
6341 8951 8.621286 AGTACAAAGTTGAGACACTTATTTTGG 58.379 33.333 0.00 0.00 35.87 3.28
6347 8957 9.880157 AAAGTTAGTACAAAGTTGAGACACTTA 57.120 29.630 0.00 0.00 35.87 2.24
6348 8958 8.788325 AAAGTTAGTACAAAGTTGAGACACTT 57.212 30.769 0.00 0.98 38.74 3.16
6349 8959 9.530633 CTAAAGTTAGTACAAAGTTGAGACACT 57.469 33.333 0.00 0.00 0.00 3.55
6350 8960 9.525409 TCTAAAGTTAGTACAAAGTTGAGACAC 57.475 33.333 0.00 0.00 28.29 3.67
6369 8979 8.959705 AGCTTAGTACAACTTTGTTCTAAAGT 57.040 30.769 16.99 8.49 44.65 2.66
6370 8980 9.651718 CAAGCTTAGTACAACTTTGTTCTAAAG 57.348 33.333 16.99 13.30 44.65 1.85
6371 8981 9.386010 TCAAGCTTAGTACAACTTTGTTCTAAA 57.614 29.630 16.99 4.97 44.65 1.85
6372 8982 8.951787 TCAAGCTTAGTACAACTTTGTTCTAA 57.048 30.769 16.00 16.00 43.82 2.10
6373 8983 8.418662 TCTCAAGCTTAGTACAACTTTGTTCTA 58.581 33.333 0.00 2.33 42.35 2.10
6374 8984 7.224949 GTCTCAAGCTTAGTACAACTTTGTTCT 59.775 37.037 0.00 3.32 42.35 3.01
6375 8985 7.011109 TGTCTCAAGCTTAGTACAACTTTGTTC 59.989 37.037 0.00 0.00 42.35 3.18
6376 8986 6.821665 TGTCTCAAGCTTAGTACAACTTTGTT 59.178 34.615 0.00 0.00 42.35 2.83
6377 8987 6.258068 GTGTCTCAAGCTTAGTACAACTTTGT 59.742 38.462 0.00 0.00 44.86 2.83
6378 8988 6.480320 AGTGTCTCAAGCTTAGTACAACTTTG 59.520 38.462 0.00 0.00 0.00 2.77
6379 8989 6.583562 AGTGTCTCAAGCTTAGTACAACTTT 58.416 36.000 0.00 0.00 0.00 2.66
6380 8990 6.163135 AGTGTCTCAAGCTTAGTACAACTT 57.837 37.500 0.00 0.00 0.00 2.66
6381 8991 5.793030 AGTGTCTCAAGCTTAGTACAACT 57.207 39.130 0.00 0.00 0.00 3.16
6382 8992 8.535690 AATAAGTGTCTCAAGCTTAGTACAAC 57.464 34.615 0.00 0.00 0.00 3.32
6383 8993 9.555727 AAAATAAGTGTCTCAAGCTTAGTACAA 57.444 29.630 0.00 0.00 0.00 2.41
6384 8994 8.988934 CAAAATAAGTGTCTCAAGCTTAGTACA 58.011 33.333 0.00 0.36 0.00 2.90
6385 8995 8.443937 CCAAAATAAGTGTCTCAAGCTTAGTAC 58.556 37.037 0.00 0.00 0.00 2.73
6386 8996 7.606456 CCCAAAATAAGTGTCTCAAGCTTAGTA 59.394 37.037 0.00 0.00 0.00 1.82
6387 8997 6.431234 CCCAAAATAAGTGTCTCAAGCTTAGT 59.569 38.462 0.00 0.00 0.00 2.24
6388 8998 6.655003 TCCCAAAATAAGTGTCTCAAGCTTAG 59.345 38.462 0.00 0.00 0.00 2.18
6389 8999 6.430000 GTCCCAAAATAAGTGTCTCAAGCTTA 59.570 38.462 0.00 0.00 0.00 3.09
6390 9000 5.241728 GTCCCAAAATAAGTGTCTCAAGCTT 59.758 40.000 0.00 0.00 0.00 3.74
6391 9001 4.762251 GTCCCAAAATAAGTGTCTCAAGCT 59.238 41.667 0.00 0.00 0.00 3.74
6392 9002 4.378459 CGTCCCAAAATAAGTGTCTCAAGC 60.378 45.833 0.00 0.00 0.00 4.01
6393 9003 4.154195 CCGTCCCAAAATAAGTGTCTCAAG 59.846 45.833 0.00 0.00 0.00 3.02
6394 9004 4.069304 CCGTCCCAAAATAAGTGTCTCAA 58.931 43.478 0.00 0.00 0.00 3.02
6395 9005 3.325425 TCCGTCCCAAAATAAGTGTCTCA 59.675 43.478 0.00 0.00 0.00 3.27
6396 9006 3.933332 CTCCGTCCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
6397 9007 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
6398 9008 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
6399 9009 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
6400 9010 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
6401 9011 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
6402 9012 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
6403 9013 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
6404 9014 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
6405 9015 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
6406 9016 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
6407 9017 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
6408 9018 1.002069 TAGTACTCCCTCCGTCCCAA 58.998 55.000 0.00 0.00 0.00 4.12
6409 9019 1.229131 ATAGTACTCCCTCCGTCCCA 58.771 55.000 0.00 0.00 0.00 4.37
6410 9020 2.378378 AATAGTACTCCCTCCGTCCC 57.622 55.000 0.00 0.00 0.00 4.46
6411 9021 4.462132 GGAATAATAGTACTCCCTCCGTCC 59.538 50.000 0.00 0.00 0.00 4.79
6412 9022 5.323581 AGGAATAATAGTACTCCCTCCGTC 58.676 45.833 0.00 0.00 0.00 4.79
6413 9023 5.336491 AGGAATAATAGTACTCCCTCCGT 57.664 43.478 0.00 0.00 0.00 4.69
6414 9024 5.773680 TCAAGGAATAATAGTACTCCCTCCG 59.226 44.000 0.00 0.00 0.00 4.63
6415 9025 7.800300 ATCAAGGAATAATAGTACTCCCTCC 57.200 40.000 0.00 0.00 0.00 4.30
6433 9043 7.984422 TGTGCATATGAACCTAATATCAAGG 57.016 36.000 11.50 3.11 40.20 3.61
6802 9422 0.909623 GGGGTTCCAGCTGCTACTTA 59.090 55.000 8.66 0.00 0.00 2.24
6840 9460 5.923733 TGGTTGTAACTTTTCACACCATT 57.076 34.783 0.00 0.00 0.00 3.16
7098 9729 2.762745 TGTTTAGTGGGAGAAAGCGAC 58.237 47.619 0.00 0.00 0.00 5.19
7205 9842 7.591057 CGAAGTTCTTGTTTTCTGCATGATTAA 59.409 33.333 0.00 0.00 0.00 1.40
7216 9853 9.052080 GTAATCTTATGCGAAGTTCTTGTTTTC 57.948 33.333 0.56 0.00 0.00 2.29
7569 10206 7.766278 AGACATTCTTACATGATAGTTGGTGAC 59.234 37.037 0.00 0.00 0.00 3.67
7607 10279 0.594540 TGTTTGTCATGCGTTGCTGC 60.595 50.000 0.00 0.00 0.00 5.25
7670 10342 5.541868 CCCAGAGTGTATCAGAATGGTAGAT 59.458 44.000 0.00 0.00 28.16 1.98
7675 10347 2.437281 AGCCCAGAGTGTATCAGAATGG 59.563 50.000 0.00 0.00 36.16 3.16
7733 10405 3.119602 GGTTTCTTTAACAATCGGGAGGC 60.120 47.826 0.00 0.00 38.55 4.70
7760 10442 8.102800 TCGTGGTATCGATATTACATACTGTT 57.897 34.615 8.66 0.00 34.85 3.16
7761 10443 7.677454 TCGTGGTATCGATATTACATACTGT 57.323 36.000 8.66 0.00 34.85 3.55
7762 10444 8.448615 TCTTCGTGGTATCGATATTACATACTG 58.551 37.037 8.66 0.00 39.57 2.74
7763 10445 8.557592 TCTTCGTGGTATCGATATTACATACT 57.442 34.615 8.66 0.00 39.57 2.12
7764 10446 9.616634 TTTCTTCGTGGTATCGATATTACATAC 57.383 33.333 8.66 0.00 39.57 2.39
7765 10447 9.836076 CTTTCTTCGTGGTATCGATATTACATA 57.164 33.333 8.66 0.27 39.57 2.29
7766 10448 7.328737 GCTTTCTTCGTGGTATCGATATTACAT 59.671 37.037 8.66 0.00 39.57 2.29
7767 10449 6.639686 GCTTTCTTCGTGGTATCGATATTACA 59.360 38.462 8.66 5.92 39.57 2.41
7768 10450 6.183359 CGCTTTCTTCGTGGTATCGATATTAC 60.183 42.308 8.66 9.72 39.57 1.89
7769 10451 5.854866 CGCTTTCTTCGTGGTATCGATATTA 59.145 40.000 8.66 0.00 39.57 0.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.