Multiple sequence alignment - TraesCS4D01G125200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G125200 chr4D 100.000 6479 0 0 1 6479 109365473 109358995 0.000000e+00 11965
1 TraesCS4D01G125200 chr4D 90.704 398 31 6 519 912 442434213 442433818 5.750000e-145 525
2 TraesCS4D01G125200 chr4D 85.333 375 30 13 504 877 379346399 379346749 1.330000e-96 364
3 TraesCS4D01G125200 chr4B 97.319 4626 73 17 922 5503 167342840 167347458 0.000000e+00 7808
4 TraesCS4D01G125200 chr4B 94.580 369 13 4 5568 5936 167347512 167347873 1.220000e-156 564
5 TraesCS4D01G125200 chr4B 87.147 389 41 5 534 913 417525425 417525037 3.590000e-117 433
6 TraesCS4D01G125200 chr4B 84.236 203 19 10 5579 5770 85897115 85896915 1.110000e-42 185
7 TraesCS4D01G125200 chr4B 94.262 122 6 1 6351 6471 565865851 565865972 1.110000e-42 185
8 TraesCS4D01G125200 chr4B 80.695 259 27 14 5522 5770 85872744 85872499 5.160000e-41 180
9 TraesCS4D01G125200 chr4B 91.200 125 7 3 365 486 167342705 167342828 4.020000e-37 167
10 TraesCS4D01G125200 chr4A 97.625 3621 67 11 2758 6368 467143207 467146818 0.000000e+00 6192
11 TraesCS4D01G125200 chr4A 95.671 1848 64 4 922 2759 467141332 467143173 0.000000e+00 2955
12 TraesCS4D01G125200 chr4A 86.250 400 35 11 5963 6353 300004195 300003807 3.610000e-112 416
13 TraesCS4D01G125200 chr4A 84.420 276 23 10 1 258 467140940 467141213 3.000000e-63 254
14 TraesCS4D01G125200 chr4A 89.305 187 7 7 6171 6349 622161417 622161598 8.460000e-54 222
15 TraesCS4D01G125200 chr4A 93.496 123 7 1 365 486 467141199 467141321 1.440000e-41 182
16 TraesCS4D01G125200 chr4A 92.000 75 5 1 5960 6034 298815245 298815318 3.200000e-18 104
17 TraesCS4D01G125200 chr2B 91.019 412 28 8 505 913 10224159 10224564 1.230000e-151 547
18 TraesCS4D01G125200 chr2B 88.250 400 28 10 5963 6353 485685939 485685550 1.650000e-125 460
19 TraesCS4D01G125200 chr2B 86.316 190 20 5 6171 6355 488701860 488702048 1.100000e-47 202
20 TraesCS4D01G125200 chr2B 94.167 120 7 0 6342 6461 146781063 146781182 3.990000e-42 183
21 TraesCS4D01G125200 chr2B 80.597 268 27 13 5515 5770 368943306 368943560 3.990000e-42 183
22 TraesCS4D01G125200 chr6B 90.365 384 29 7 534 913 693582247 693582626 1.250000e-136 497
23 TraesCS4D01G125200 chr1A 89.529 382 35 5 534 913 548225307 548225685 4.540000e-131 479
24 TraesCS4D01G125200 chr1A 88.235 187 8 8 6174 6352 143378915 143378735 1.830000e-50 211
25 TraesCS4D01G125200 chr1B 87.811 402 30 11 5963 6355 200035928 200035537 2.750000e-123 453
26 TraesCS4D01G125200 chr1B 85.904 376 44 8 538 908 146781387 146781758 6.090000e-105 392
27 TraesCS4D01G125200 chr1B 93.277 119 8 0 6354 6472 661509419 661509301 6.680000e-40 176
28 TraesCS4D01G125200 chrUn 87.626 396 29 11 5963 6353 53051509 53051129 5.960000e-120 442
29 TraesCS4D01G125200 chr6A 83.797 395 51 9 5963 6353 239316231 239316616 4.770000e-96 363
30 TraesCS4D01G125200 chr6A 93.103 116 7 1 5821 5936 273934852 273934966 1.120000e-37 169
31 TraesCS4D01G125200 chr6A 93.103 116 7 1 5821 5936 274008717 274008831 1.120000e-37 169
32 TraesCS4D01G125200 chr5A 84.409 372 49 7 541 906 146917697 146917329 2.220000e-94 357
33 TraesCS4D01G125200 chr7B 89.894 188 6 7 6174 6353 511463853 511463671 5.050000e-56 230
34 TraesCS4D01G125200 chr7B 92.742 124 7 2 6338 6460 495311932 495311810 1.860000e-40 178
35 TraesCS4D01G125200 chr7D 99.123 114 1 0 6347 6460 58205442 58205555 8.520000e-49 206
36 TraesCS4D01G125200 chr7D 89.130 92 8 2 494 585 113982635 113982724 5.310000e-21 113
37 TraesCS4D01G125200 chr5B 94.915 118 6 0 6347 6464 145479140 145479257 1.110000e-42 185
38 TraesCS4D01G125200 chr5B 96.429 112 4 0 6351 6462 583512141 583512252 1.110000e-42 185
39 TraesCS4D01G125200 chr3B 80.524 267 27 16 5515 5770 391143679 391143427 1.440000e-41 182
40 TraesCS4D01G125200 chr3B 92.063 126 9 1 6344 6468 623661403 623661278 6.680000e-40 176
41 TraesCS4D01G125200 chr3A 94.828 116 6 0 5821 5936 250042973 250043088 1.440000e-41 182
42 TraesCS4D01G125200 chr3A 78.605 215 38 5 5616 5825 584936677 584936466 1.130000e-27 135
43 TraesCS4D01G125200 chr5D 93.277 119 8 0 6346 6464 29168318 29168200 6.680000e-40 176
44 TraesCS4D01G125200 chr2A 83.333 120 19 1 784 903 733423645 733423763 6.870000e-20 110


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G125200 chr4D 109358995 109365473 6478 True 11965.000000 11965 100.000000 1 6479 1 chr4D.!!$R1 6478
1 TraesCS4D01G125200 chr4B 167342705 167347873 5168 False 2846.333333 7808 94.366333 365 5936 3 chr4B.!!$F2 5571
2 TraesCS4D01G125200 chr4A 467140940 467146818 5878 False 2395.750000 6192 92.803000 1 6368 4 chr4A.!!$F3 6367

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
903 923 0.034337 TCTACGTGGGAGTGGTTTGC 59.966 55.000 0.00 0.0 0.00 3.68 F
904 924 0.250124 CTACGTGGGAGTGGTTTGCA 60.250 55.000 0.00 0.0 0.00 4.08 F
905 925 0.533308 TACGTGGGAGTGGTTTGCAC 60.533 55.000 0.00 0.0 0.00 4.57 F
1850 1878 1.618888 GGCCAGGGACAGTGTAGTAGA 60.619 57.143 0.00 0.0 0.00 2.59 F
3160 3257 0.250858 CCCACAGACATGCTTCCACA 60.251 55.000 0.00 0.0 0.00 4.17 F
4559 4674 0.322975 TCTTCAGGAAGCTGAGGTGC 59.677 55.000 4.15 0.0 38.28 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1834 1862 2.285707 TCCCTCTACTACACTGTCCCT 58.714 52.381 0.0 0.0 0.00 4.20 R
1850 1878 5.072464 GTGCCCTCTTAATCTCTTATTCCCT 59.928 44.000 0.0 0.0 0.00 4.20 R
1878 1906 9.698309 CCCTGATATGTAACTCTTATACAACAG 57.302 37.037 0.0 0.0 36.88 3.16 R
3275 3385 0.041535 TAACCGTCCTAAGCAGGGGA 59.958 55.000 0.0 0.0 42.87 4.81 R
5265 5380 7.239972 TGTGTTAAAAGTTTGAATTTGCAAGC 58.760 30.769 0.0 0.0 0.00 4.01 R
6417 6573 0.245266 TGTCGCACGTATGGATGTGT 59.755 50.000 0.0 0.0 43.46 3.72 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
73 75 6.573617 AACTTCACGCATTTGAAAAGAAAG 57.426 33.333 0.00 0.00 35.07 2.62
74 76 5.043248 ACTTCACGCATTTGAAAAGAAAGG 58.957 37.500 0.00 0.00 35.07 3.11
127 146 7.538303 AAGAAAAACGGAGTAAACGAGTTTA 57.462 32.000 4.48 4.48 45.00 2.01
141 160 2.801679 CGAGTTTACAGGTTAAACCGCA 59.198 45.455 3.79 0.00 44.90 5.69
171 190 2.668212 CCCAGAAAAGCCGCGTGA 60.668 61.111 4.92 0.00 0.00 4.35
245 264 4.008933 GGGAGAGTGTGCGCCAGT 62.009 66.667 4.18 5.30 0.00 4.00
246 265 2.031163 GGAGAGTGTGCGCCAGTT 59.969 61.111 4.18 0.00 0.00 3.16
247 266 1.292223 GGAGAGTGTGCGCCAGTTA 59.708 57.895 4.18 0.00 0.00 2.24
248 267 0.320421 GGAGAGTGTGCGCCAGTTAA 60.320 55.000 4.18 0.00 0.00 2.01
249 268 1.676014 GGAGAGTGTGCGCCAGTTAAT 60.676 52.381 4.18 0.00 0.00 1.40
250 269 1.394917 GAGAGTGTGCGCCAGTTAATG 59.605 52.381 4.18 0.00 0.00 1.90
251 270 0.179189 GAGTGTGCGCCAGTTAATGC 60.179 55.000 4.18 0.00 0.00 3.56
252 271 0.888736 AGTGTGCGCCAGTTAATGCA 60.889 50.000 4.18 0.00 34.44 3.96
253 272 0.039617 GTGTGCGCCAGTTAATGCAA 60.040 50.000 4.18 0.00 39.34 4.08
254 273 0.240678 TGTGCGCCAGTTAATGCAAG 59.759 50.000 4.18 0.00 39.34 4.01
255 274 1.072666 GTGCGCCAGTTAATGCAAGC 61.073 55.000 4.18 0.00 39.34 4.01
256 275 1.243342 TGCGCCAGTTAATGCAAGCT 61.243 50.000 4.18 0.00 33.80 3.74
257 276 0.524180 GCGCCAGTTAATGCAAGCTC 60.524 55.000 0.00 0.00 0.00 4.09
258 277 0.099436 CGCCAGTTAATGCAAGCTCC 59.901 55.000 0.00 0.00 0.00 4.70
259 278 1.176527 GCCAGTTAATGCAAGCTCCA 58.823 50.000 0.00 0.00 0.00 3.86
260 279 1.133790 GCCAGTTAATGCAAGCTCCAG 59.866 52.381 0.00 0.00 0.00 3.86
261 280 1.133790 CCAGTTAATGCAAGCTCCAGC 59.866 52.381 0.00 0.00 42.49 4.85
262 281 1.133790 CAGTTAATGCAAGCTCCAGCC 59.866 52.381 0.00 0.00 43.38 4.85
263 282 0.457443 GTTAATGCAAGCTCCAGCCC 59.543 55.000 0.00 0.00 43.38 5.19
264 283 0.039472 TTAATGCAAGCTCCAGCCCA 59.961 50.000 0.00 0.00 43.38 5.36
265 284 0.680921 TAATGCAAGCTCCAGCCCAC 60.681 55.000 0.00 0.00 43.38 4.61
267 286 4.704833 GCAAGCTCCAGCCCACGA 62.705 66.667 0.00 0.00 43.38 4.35
268 287 2.270205 CAAGCTCCAGCCCACGAT 59.730 61.111 0.00 0.00 43.38 3.73
269 288 1.817099 CAAGCTCCAGCCCACGATC 60.817 63.158 0.00 0.00 43.38 3.69
270 289 3.036429 AAGCTCCAGCCCACGATCC 62.036 63.158 0.00 0.00 43.38 3.36
271 290 4.554036 GCTCCAGCCCACGATCCC 62.554 72.222 0.00 0.00 34.31 3.85
272 291 3.866582 CTCCAGCCCACGATCCCC 61.867 72.222 0.00 0.00 0.00 4.81
273 292 4.414956 TCCAGCCCACGATCCCCT 62.415 66.667 0.00 0.00 0.00 4.79
274 293 3.866582 CCAGCCCACGATCCCCTC 61.867 72.222 0.00 0.00 0.00 4.30
275 294 3.083349 CAGCCCACGATCCCCTCA 61.083 66.667 0.00 0.00 0.00 3.86
276 295 2.040464 AGCCCACGATCCCCTCAT 60.040 61.111 0.00 0.00 0.00 2.90
277 296 1.694169 AGCCCACGATCCCCTCATT 60.694 57.895 0.00 0.00 0.00 2.57
278 297 0.399949 AGCCCACGATCCCCTCATTA 60.400 55.000 0.00 0.00 0.00 1.90
279 298 0.693049 GCCCACGATCCCCTCATTAT 59.307 55.000 0.00 0.00 0.00 1.28
280 299 1.339151 GCCCACGATCCCCTCATTATC 60.339 57.143 0.00 0.00 0.00 1.75
281 300 1.279271 CCCACGATCCCCTCATTATCC 59.721 57.143 0.00 0.00 0.00 2.59
282 301 1.279271 CCACGATCCCCTCATTATCCC 59.721 57.143 0.00 0.00 0.00 3.85
283 302 2.260822 CACGATCCCCTCATTATCCCT 58.739 52.381 0.00 0.00 0.00 4.20
284 303 2.027745 CACGATCCCCTCATTATCCCTG 60.028 54.545 0.00 0.00 0.00 4.45
285 304 2.260822 CGATCCCCTCATTATCCCTGT 58.739 52.381 0.00 0.00 0.00 4.00
286 305 3.181410 ACGATCCCCTCATTATCCCTGTA 60.181 47.826 0.00 0.00 0.00 2.74
287 306 4.033709 CGATCCCCTCATTATCCCTGTAT 58.966 47.826 0.00 0.00 0.00 2.29
288 307 5.208890 CGATCCCCTCATTATCCCTGTATA 58.791 45.833 0.00 0.00 0.00 1.47
289 308 5.661312 CGATCCCCTCATTATCCCTGTATAA 59.339 44.000 0.00 0.00 0.00 0.98
290 309 6.156256 CGATCCCCTCATTATCCCTGTATAAA 59.844 42.308 0.00 0.00 0.00 1.40
291 310 6.697641 TCCCCTCATTATCCCTGTATAAAC 57.302 41.667 0.00 0.00 0.00 2.01
292 311 5.550403 TCCCCTCATTATCCCTGTATAAACC 59.450 44.000 0.00 0.00 0.00 3.27
293 312 5.551977 CCCCTCATTATCCCTGTATAAACCT 59.448 44.000 0.00 0.00 0.00 3.50
294 313 6.045577 CCCCTCATTATCCCTGTATAAACCTT 59.954 42.308 0.00 0.00 0.00 3.50
295 314 6.942576 CCCTCATTATCCCTGTATAAACCTTG 59.057 42.308 0.00 0.00 0.00 3.61
296 315 6.431234 CCTCATTATCCCTGTATAAACCTTGC 59.569 42.308 0.00 0.00 0.00 4.01
297 316 7.149202 TCATTATCCCTGTATAAACCTTGCT 57.851 36.000 0.00 0.00 0.00 3.91
298 317 8.270137 TCATTATCCCTGTATAAACCTTGCTA 57.730 34.615 0.00 0.00 0.00 3.49
299 318 8.154856 TCATTATCCCTGTATAAACCTTGCTAC 58.845 37.037 0.00 0.00 0.00 3.58
300 319 7.685849 TTATCCCTGTATAAACCTTGCTACT 57.314 36.000 0.00 0.00 0.00 2.57
301 320 8.786710 TTATCCCTGTATAAACCTTGCTACTA 57.213 34.615 0.00 0.00 0.00 1.82
302 321 7.873699 ATCCCTGTATAAACCTTGCTACTAT 57.126 36.000 0.00 0.00 0.00 2.12
303 322 7.299246 TCCCTGTATAAACCTTGCTACTATC 57.701 40.000 0.00 0.00 0.00 2.08
304 323 7.073854 TCCCTGTATAAACCTTGCTACTATCT 58.926 38.462 0.00 0.00 0.00 1.98
305 324 8.229605 TCCCTGTATAAACCTTGCTACTATCTA 58.770 37.037 0.00 0.00 0.00 1.98
306 325 8.867097 CCCTGTATAAACCTTGCTACTATCTAA 58.133 37.037 0.00 0.00 0.00 2.10
315 334 9.601217 AACCTTGCTACTATCTAATAAGTGTTG 57.399 33.333 0.00 0.00 0.00 3.33
316 335 8.204836 ACCTTGCTACTATCTAATAAGTGTTGG 58.795 37.037 0.00 0.00 0.00 3.77
317 336 8.204836 CCTTGCTACTATCTAATAAGTGTTGGT 58.795 37.037 0.00 0.00 0.00 3.67
321 340 9.857957 GCTACTATCTAATAAGTGTTGGTATCC 57.142 37.037 0.00 0.00 0.00 2.59
351 370 8.683550 AAAAATCTAATAAAGCGCTGGTTTAC 57.316 30.769 12.58 0.00 38.11 2.01
352 371 6.373186 AATCTAATAAAGCGCTGGTTTACC 57.627 37.500 12.58 0.00 38.11 2.85
353 372 3.866910 TCTAATAAAGCGCTGGTTTACCG 59.133 43.478 12.58 0.00 38.11 4.02
357 376 2.740826 GCGCTGGTTTACCGCTCA 60.741 61.111 0.00 0.00 43.95 4.26
358 377 2.322081 GCGCTGGTTTACCGCTCAA 61.322 57.895 0.00 0.00 43.95 3.02
359 378 1.847890 GCGCTGGTTTACCGCTCAAA 61.848 55.000 0.00 0.00 43.95 2.69
360 379 0.589223 CGCTGGTTTACCGCTCAAAA 59.411 50.000 11.79 0.00 39.43 2.44
361 380 1.002251 CGCTGGTTTACCGCTCAAAAA 60.002 47.619 11.79 0.00 39.43 1.94
396 415 2.936498 GCTCAATAACTGGCGCTTAAGA 59.064 45.455 7.64 0.74 0.00 2.10
424 444 0.107945 AGATCTGGGAAACTGAGCGC 60.108 55.000 0.00 0.00 38.32 5.92
425 445 1.078143 ATCTGGGAAACTGAGCGCC 60.078 57.895 2.29 0.00 0.00 6.53
447 467 1.675641 GCAGTTTCGTGAGGCCCAT 60.676 57.895 0.00 0.00 0.00 4.00
486 506 7.471657 TGTCATATTGCACGTCGTAAATTAT 57.528 32.000 9.88 1.20 0.00 1.28
487 507 7.911343 TGTCATATTGCACGTCGTAAATTATT 58.089 30.769 9.88 0.00 0.00 1.40
488 508 7.848539 TGTCATATTGCACGTCGTAAATTATTG 59.151 33.333 9.88 7.09 0.00 1.90
489 509 8.059502 GTCATATTGCACGTCGTAAATTATTGA 58.940 33.333 9.88 8.67 0.00 2.57
490 510 8.059502 TCATATTGCACGTCGTAAATTATTGAC 58.940 33.333 9.88 0.17 0.00 3.18
491 511 5.593183 TTGCACGTCGTAAATTATTGACA 57.407 34.783 0.00 0.00 0.00 3.58
492 512 5.593183 TGCACGTCGTAAATTATTGACAA 57.407 34.783 0.00 0.00 0.00 3.18
493 513 6.171932 TGCACGTCGTAAATTATTGACAAT 57.828 33.333 5.87 5.87 0.00 2.71
494 514 6.018542 TGCACGTCGTAAATTATTGACAATG 58.981 36.000 11.05 6.99 0.00 2.82
495 515 6.019152 GCACGTCGTAAATTATTGACAATGT 58.981 36.000 11.05 0.00 0.00 2.71
496 516 6.521821 GCACGTCGTAAATTATTGACAATGTT 59.478 34.615 11.05 3.23 0.00 2.71
497 517 7.252865 GCACGTCGTAAATTATTGACAATGTTC 60.253 37.037 11.05 0.00 0.00 3.18
498 518 7.742525 CACGTCGTAAATTATTGACAATGTTCA 59.257 33.333 11.05 0.00 0.00 3.18
499 519 8.283992 ACGTCGTAAATTATTGACAATGTTCAA 58.716 29.630 11.05 0.00 39.79 2.69
500 520 9.272901 CGTCGTAAATTATTGACAATGTTCAAT 57.727 29.630 11.05 12.88 46.00 2.57
529 549 7.769272 TTTGACAATGTTCAAAGAATGTTCC 57.231 32.000 6.82 0.00 39.94 3.62
530 550 6.713762 TGACAATGTTCAAAGAATGTTCCT 57.286 33.333 0.00 0.00 0.00 3.36
531 551 6.506147 TGACAATGTTCAAAGAATGTTCCTG 58.494 36.000 0.00 0.00 0.00 3.86
532 552 6.096705 TGACAATGTTCAAAGAATGTTCCTGT 59.903 34.615 0.00 0.00 0.00 4.00
533 553 6.877236 ACAATGTTCAAAGAATGTTCCTGTT 58.123 32.000 0.00 0.00 0.00 3.16
534 554 7.330262 ACAATGTTCAAAGAATGTTCCTGTTT 58.670 30.769 0.00 0.00 0.00 2.83
535 555 7.823799 ACAATGTTCAAAGAATGTTCCTGTTTT 59.176 29.630 0.00 0.00 0.00 2.43
536 556 9.311916 CAATGTTCAAAGAATGTTCCTGTTTTA 57.688 29.630 0.00 0.00 0.00 1.52
537 557 9.883142 AATGTTCAAAGAATGTTCCTGTTTTAA 57.117 25.926 0.00 0.00 0.00 1.52
538 558 9.883142 ATGTTCAAAGAATGTTCCTGTTTTAAA 57.117 25.926 0.00 0.00 0.00 1.52
539 559 9.712305 TGTTCAAAGAATGTTCCTGTTTTAAAA 57.288 25.926 0.00 0.00 0.00 1.52
569 589 9.695526 TGTTCATGTTTTCATTTATTTCAGGAG 57.304 29.630 0.00 0.00 38.64 3.69
570 590 9.696917 GTTCATGTTTTCATTTATTTCAGGAGT 57.303 29.630 0.00 0.00 38.64 3.85
640 660 8.455903 TCTTTCTTCACAGATTCAAGAAATGT 57.544 30.769 9.01 0.00 42.45 2.71
641 661 8.906867 TCTTTCTTCACAGATTCAAGAAATGTT 58.093 29.630 9.01 0.00 42.45 2.71
642 662 9.178427 CTTTCTTCACAGATTCAAGAAATGTTC 57.822 33.333 9.01 0.00 42.45 3.18
643 663 8.455903 TTCTTCACAGATTCAAGAAATGTTCT 57.544 30.769 2.42 0.00 43.15 3.01
645 665 8.562892 TCTTCACAGATTCAAGAAATGTTCTTC 58.437 33.333 0.24 0.00 46.62 2.87
646 666 8.455903 TTCACAGATTCAAGAAATGTTCTTCT 57.544 30.769 0.24 0.00 46.62 2.85
647 667 8.455903 TCACAGATTCAAGAAATGTTCTTCTT 57.544 30.769 0.24 0.00 46.62 2.52
648 668 8.906867 TCACAGATTCAAGAAATGTTCTTCTTT 58.093 29.630 0.24 0.00 46.62 2.52
649 669 9.178427 CACAGATTCAAGAAATGTTCTTCTTTC 57.822 33.333 0.24 0.00 46.62 2.62
650 670 8.355913 ACAGATTCAAGAAATGTTCTTCTTTCC 58.644 33.333 0.24 0.00 46.62 3.13
651 671 8.355169 CAGATTCAAGAAATGTTCTTCTTTCCA 58.645 33.333 0.24 0.00 46.62 3.53
652 672 8.917088 AGATTCAAGAAATGTTCTTCTTTCCAA 58.083 29.630 0.24 0.00 46.62 3.53
653 673 9.533253 GATTCAAGAAATGTTCTTCTTTCCAAA 57.467 29.630 0.24 0.00 46.62 3.28
655 675 9.889128 TTCAAGAAATGTTCTTCTTTCCAAATT 57.111 25.926 0.24 0.00 46.62 1.82
656 676 9.889128 TCAAGAAATGTTCTTCTTTCCAAATTT 57.111 25.926 0.24 0.00 46.62 1.82
657 677 9.925268 CAAGAAATGTTCTTCTTTCCAAATTTG 57.075 29.630 11.40 11.40 46.62 2.32
658 678 9.671279 AAGAAATGTTCTTCTTTCCAAATTTGT 57.329 25.926 16.73 0.00 46.62 2.83
659 679 9.671279 AGAAATGTTCTTCTTTCCAAATTTGTT 57.329 25.926 16.73 0.00 36.36 2.83
660 680 9.920826 GAAATGTTCTTCTTTCCAAATTTGTTC 57.079 29.630 16.73 5.29 0.00 3.18
661 681 9.447157 AAATGTTCTTCTTTCCAAATTTGTTCA 57.553 25.926 16.73 0.00 0.00 3.18
662 682 7.826260 TGTTCTTCTTTCCAAATTTGTTCAC 57.174 32.000 16.73 1.93 0.00 3.18
663 683 7.382110 TGTTCTTCTTTCCAAATTTGTTCACA 58.618 30.769 16.73 4.16 0.00 3.58
664 684 8.040132 TGTTCTTCTTTCCAAATTTGTTCACAT 58.960 29.630 16.73 0.00 0.00 3.21
665 685 8.542953 GTTCTTCTTTCCAAATTTGTTCACATC 58.457 33.333 16.73 0.00 0.00 3.06
666 686 7.780064 TCTTCTTTCCAAATTTGTTCACATCA 58.220 30.769 16.73 0.00 0.00 3.07
667 687 8.423349 TCTTCTTTCCAAATTTGTTCACATCAT 58.577 29.630 16.73 0.00 0.00 2.45
668 688 8.592105 TTCTTTCCAAATTTGTTCACATCATC 57.408 30.769 16.73 0.00 0.00 2.92
669 689 6.862608 TCTTTCCAAATTTGTTCACATCATCG 59.137 34.615 16.73 0.00 0.00 3.84
670 690 5.956068 TCCAAATTTGTTCACATCATCGA 57.044 34.783 16.73 0.00 0.00 3.59
671 691 6.324561 TCCAAATTTGTTCACATCATCGAA 57.675 33.333 16.73 0.00 0.00 3.71
672 692 6.743110 TCCAAATTTGTTCACATCATCGAAA 58.257 32.000 16.73 0.00 0.00 3.46
673 693 7.377398 TCCAAATTTGTTCACATCATCGAAAT 58.623 30.769 16.73 0.00 0.00 2.17
674 694 7.328982 TCCAAATTTGTTCACATCATCGAAATG 59.671 33.333 16.73 9.03 0.00 2.32
675 695 7.116662 CCAAATTTGTTCACATCATCGAAATGT 59.883 33.333 16.73 10.16 37.85 2.71
676 696 8.489559 CAAATTTGTTCACATCATCGAAATGTT 58.510 29.630 10.15 0.00 35.19 2.71
677 697 8.592105 AATTTGTTCACATCATCGAAATGTTT 57.408 26.923 12.62 2.90 35.19 2.83
678 698 9.689976 AATTTGTTCACATCATCGAAATGTTTA 57.310 25.926 12.62 3.89 35.19 2.01
679 699 9.859427 ATTTGTTCACATCATCGAAATGTTTAT 57.141 25.926 12.62 1.30 35.19 1.40
680 700 8.672214 TTGTTCACATCATCGAAATGTTTATG 57.328 30.769 12.62 4.35 35.19 1.90
681 701 7.815641 TGTTCACATCATCGAAATGTTTATGT 58.184 30.769 12.62 1.22 35.19 2.29
682 702 8.296000 TGTTCACATCATCGAAATGTTTATGTT 58.704 29.630 12.62 0.00 35.19 2.71
683 703 9.128107 GTTCACATCATCGAAATGTTTATGTTT 57.872 29.630 12.62 0.00 35.19 2.83
684 704 9.689976 TTCACATCATCGAAATGTTTATGTTTT 57.310 25.926 12.62 0.00 35.19 2.43
759 779 7.315419 TCGTAATTTCGAAAAATTCAGTTGC 57.685 32.000 15.66 5.52 42.66 4.17
760 780 6.913132 TCGTAATTTCGAAAAATTCAGTTGCA 59.087 30.769 15.66 0.00 42.66 4.08
761 781 7.112844 TCGTAATTTCGAAAAATTCAGTTGCAG 59.887 33.333 15.66 3.90 42.66 4.41
762 782 6.529463 AATTTCGAAAAATTCAGTTGCAGG 57.471 33.333 15.66 0.00 40.28 4.85
763 783 4.647424 TTCGAAAAATTCAGTTGCAGGT 57.353 36.364 0.00 0.00 0.00 4.00
764 784 4.223320 TCGAAAAATTCAGTTGCAGGTC 57.777 40.909 0.00 0.00 0.00 3.85
765 785 3.004315 TCGAAAAATTCAGTTGCAGGTCC 59.996 43.478 0.00 0.00 0.00 4.46
766 786 3.004734 CGAAAAATTCAGTTGCAGGTCCT 59.995 43.478 0.00 0.00 0.00 3.85
767 787 4.550422 GAAAAATTCAGTTGCAGGTCCTC 58.450 43.478 0.00 0.00 0.00 3.71
768 788 1.813513 AATTCAGTTGCAGGTCCTCG 58.186 50.000 0.00 0.00 0.00 4.63
769 789 0.036010 ATTCAGTTGCAGGTCCTCGG 60.036 55.000 0.00 0.00 0.00 4.63
770 790 1.407656 TTCAGTTGCAGGTCCTCGGT 61.408 55.000 0.00 0.00 0.00 4.69
771 791 1.071471 CAGTTGCAGGTCCTCGGTT 59.929 57.895 0.00 0.00 0.00 4.44
772 792 0.320374 CAGTTGCAGGTCCTCGGTTA 59.680 55.000 0.00 0.00 0.00 2.85
773 793 0.608640 AGTTGCAGGTCCTCGGTTAG 59.391 55.000 0.00 0.00 0.00 2.34
774 794 0.606604 GTTGCAGGTCCTCGGTTAGA 59.393 55.000 0.00 0.00 0.00 2.10
775 795 0.606604 TTGCAGGTCCTCGGTTAGAC 59.393 55.000 0.00 0.00 0.00 2.59
778 798 4.447734 GGTCCTCGGTTAGACCCA 57.552 61.111 0.00 0.00 45.76 4.51
779 799 2.674958 GGTCCTCGGTTAGACCCAA 58.325 57.895 0.00 0.00 45.76 4.12
780 800 1.201424 GGTCCTCGGTTAGACCCAAT 58.799 55.000 0.00 0.00 45.76 3.16
781 801 2.391678 GGTCCTCGGTTAGACCCAATA 58.608 52.381 0.00 0.00 45.76 1.90
782 802 2.102084 GGTCCTCGGTTAGACCCAATAC 59.898 54.545 0.00 0.00 45.76 1.89
783 803 2.762327 GTCCTCGGTTAGACCCAATACA 59.238 50.000 0.00 0.00 33.75 2.29
784 804 3.387050 GTCCTCGGTTAGACCCAATACAT 59.613 47.826 0.00 0.00 33.75 2.29
785 805 3.386726 TCCTCGGTTAGACCCAATACATG 59.613 47.826 0.00 0.00 33.75 3.21
800 820 4.789012 ATACATGGACTGCAGTTTTTGG 57.211 40.909 22.65 12.30 0.00 3.28
801 821 1.688197 ACATGGACTGCAGTTTTTGGG 59.312 47.619 22.65 11.24 0.00 4.12
802 822 1.962807 CATGGACTGCAGTTTTTGGGA 59.037 47.619 22.65 0.43 0.00 4.37
803 823 2.380064 TGGACTGCAGTTTTTGGGAT 57.620 45.000 22.65 0.00 0.00 3.85
804 824 2.676748 TGGACTGCAGTTTTTGGGATT 58.323 42.857 22.65 0.00 0.00 3.01
805 825 3.037549 TGGACTGCAGTTTTTGGGATTT 58.962 40.909 22.65 0.00 0.00 2.17
806 826 3.454082 TGGACTGCAGTTTTTGGGATTTT 59.546 39.130 22.65 0.00 0.00 1.82
807 827 4.080638 TGGACTGCAGTTTTTGGGATTTTT 60.081 37.500 22.65 0.00 0.00 1.94
830 850 9.565213 TTTTTGCAAATTAATGTTCCAGTTTTG 57.435 25.926 13.65 0.00 0.00 2.44
831 851 7.856145 TTGCAAATTAATGTTCCAGTTTTGT 57.144 28.000 0.00 0.00 0.00 2.83
832 852 7.475771 TGCAAATTAATGTTCCAGTTTTGTC 57.524 32.000 0.00 0.00 0.00 3.18
833 853 6.199908 TGCAAATTAATGTTCCAGTTTTGTCG 59.800 34.615 0.00 0.00 0.00 4.35
834 854 6.580476 CAAATTAATGTTCCAGTTTTGTCGC 58.420 36.000 0.00 0.00 0.00 5.19
835 855 5.705609 ATTAATGTTCCAGTTTTGTCGCT 57.294 34.783 0.00 0.00 0.00 4.93
836 856 3.354089 AATGTTCCAGTTTTGTCGCTG 57.646 42.857 0.00 0.00 0.00 5.18
837 857 1.745232 TGTTCCAGTTTTGTCGCTGT 58.255 45.000 0.00 0.00 0.00 4.40
838 858 1.668751 TGTTCCAGTTTTGTCGCTGTC 59.331 47.619 0.00 0.00 0.00 3.51
839 859 0.934496 TTCCAGTTTTGTCGCTGTCG 59.066 50.000 0.00 0.00 0.00 4.35
840 860 0.179094 TCCAGTTTTGTCGCTGTCGT 60.179 50.000 0.00 0.00 36.96 4.34
841 861 1.067364 TCCAGTTTTGTCGCTGTCGTA 59.933 47.619 0.00 0.00 36.96 3.43
842 862 1.191647 CCAGTTTTGTCGCTGTCGTAC 59.808 52.381 0.00 0.00 36.96 3.67
843 863 1.126079 AGTTTTGTCGCTGTCGTACG 58.874 50.000 9.53 9.53 36.96 3.67
844 864 0.848305 GTTTTGTCGCTGTCGTACGT 59.152 50.000 16.05 0.00 36.96 3.57
845 865 0.847670 TTTTGTCGCTGTCGTACGTG 59.152 50.000 16.05 8.11 36.96 4.49
846 866 0.248580 TTTGTCGCTGTCGTACGTGT 60.249 50.000 16.05 0.00 36.96 4.49
847 867 0.658244 TTGTCGCTGTCGTACGTGTC 60.658 55.000 16.05 7.91 36.96 3.67
848 868 1.206072 GTCGCTGTCGTACGTGTCT 59.794 57.895 16.05 0.00 36.96 3.41
849 869 0.385223 GTCGCTGTCGTACGTGTCTT 60.385 55.000 16.05 0.00 36.96 3.01
850 870 0.308684 TCGCTGTCGTACGTGTCTTT 59.691 50.000 16.05 0.00 36.96 2.52
851 871 1.530720 TCGCTGTCGTACGTGTCTTTA 59.469 47.619 16.05 0.00 36.96 1.85
852 872 2.032117 TCGCTGTCGTACGTGTCTTTAA 60.032 45.455 16.05 0.00 36.96 1.52
853 873 2.720578 CGCTGTCGTACGTGTCTTTAAA 59.279 45.455 16.05 0.00 0.00 1.52
854 874 3.362831 CGCTGTCGTACGTGTCTTTAAAT 59.637 43.478 16.05 0.00 0.00 1.40
855 875 4.625135 GCTGTCGTACGTGTCTTTAAATG 58.375 43.478 16.05 0.00 0.00 2.32
856 876 4.149396 GCTGTCGTACGTGTCTTTAAATGT 59.851 41.667 16.05 0.00 0.00 2.71
857 877 5.332808 GCTGTCGTACGTGTCTTTAAATGTT 60.333 40.000 16.05 0.00 0.00 2.71
858 878 5.965202 TGTCGTACGTGTCTTTAAATGTTG 58.035 37.500 16.05 0.00 0.00 3.33
859 879 4.837050 GTCGTACGTGTCTTTAAATGTTGC 59.163 41.667 16.05 0.00 0.00 4.17
860 880 3.830882 CGTACGTGTCTTTAAATGTTGCG 59.169 43.478 7.22 0.00 0.00 4.85
861 881 2.646250 ACGTGTCTTTAAATGTTGCGC 58.354 42.857 0.00 0.00 0.00 6.09
862 882 2.289547 ACGTGTCTTTAAATGTTGCGCT 59.710 40.909 9.73 0.00 0.00 5.92
863 883 2.651703 CGTGTCTTTAAATGTTGCGCTG 59.348 45.455 9.73 0.00 0.00 5.18
864 884 2.405025 GTGTCTTTAAATGTTGCGCTGC 59.595 45.455 9.73 1.25 0.00 5.25
865 885 1.985684 GTCTTTAAATGTTGCGCTGCC 59.014 47.619 9.73 0.00 0.00 4.85
866 886 1.611006 TCTTTAAATGTTGCGCTGCCA 59.389 42.857 9.73 2.39 0.00 4.92
867 887 2.035193 TCTTTAAATGTTGCGCTGCCAA 59.965 40.909 9.73 0.00 0.00 4.52
868 888 2.739885 TTAAATGTTGCGCTGCCAAT 57.260 40.000 9.73 0.00 0.00 3.16
869 889 2.739885 TAAATGTTGCGCTGCCAATT 57.260 40.000 9.73 4.58 0.00 2.32
870 890 1.881591 AAATGTTGCGCTGCCAATTT 58.118 40.000 9.73 5.20 0.00 1.82
871 891 1.149987 AATGTTGCGCTGCCAATTTG 58.850 45.000 9.73 0.00 0.00 2.32
872 892 0.317799 ATGTTGCGCTGCCAATTTGA 59.682 45.000 9.73 0.00 0.00 2.69
873 893 0.103755 TGTTGCGCTGCCAATTTGAA 59.896 45.000 9.73 0.00 0.00 2.69
874 894 0.508213 GTTGCGCTGCCAATTTGAAC 59.492 50.000 9.73 0.00 0.00 3.18
875 895 0.103755 TTGCGCTGCCAATTTGAACA 59.896 45.000 9.73 0.00 0.00 3.18
876 896 0.317799 TGCGCTGCCAATTTGAACAT 59.682 45.000 9.73 0.00 0.00 2.71
877 897 0.717224 GCGCTGCCAATTTGAACATG 59.283 50.000 0.00 0.00 0.00 3.21
878 898 1.669502 GCGCTGCCAATTTGAACATGA 60.670 47.619 0.00 0.00 0.00 3.07
879 899 2.256174 CGCTGCCAATTTGAACATGAG 58.744 47.619 0.00 0.00 0.00 2.90
880 900 2.095110 CGCTGCCAATTTGAACATGAGA 60.095 45.455 0.00 0.00 0.00 3.27
881 901 3.508762 GCTGCCAATTTGAACATGAGAG 58.491 45.455 0.00 0.00 0.00 3.20
882 902 3.508762 CTGCCAATTTGAACATGAGAGC 58.491 45.455 0.00 0.00 0.00 4.09
883 903 2.095110 TGCCAATTTGAACATGAGAGCG 60.095 45.455 0.00 0.00 0.00 5.03
884 904 2.095059 GCCAATTTGAACATGAGAGCGT 60.095 45.455 0.00 0.00 0.00 5.07
885 905 3.751621 CCAATTTGAACATGAGAGCGTC 58.248 45.455 0.00 0.00 0.00 5.19
886 906 3.438087 CCAATTTGAACATGAGAGCGTCT 59.562 43.478 0.00 0.00 0.00 4.18
887 907 4.631377 CCAATTTGAACATGAGAGCGTCTA 59.369 41.667 0.00 0.00 0.00 2.59
888 908 5.446473 CCAATTTGAACATGAGAGCGTCTAC 60.446 44.000 0.00 0.00 0.00 2.59
889 909 2.544480 TGAACATGAGAGCGTCTACG 57.456 50.000 0.00 0.00 43.27 3.51
890 910 1.810755 TGAACATGAGAGCGTCTACGT 59.189 47.619 0.00 0.00 42.22 3.57
891 911 2.177977 GAACATGAGAGCGTCTACGTG 58.822 52.381 0.00 0.00 42.22 4.49
892 912 0.452184 ACATGAGAGCGTCTACGTGG 59.548 55.000 0.00 0.00 42.22 4.94
893 913 0.248661 CATGAGAGCGTCTACGTGGG 60.249 60.000 0.00 0.00 42.22 4.61
894 914 0.393944 ATGAGAGCGTCTACGTGGGA 60.394 55.000 0.00 0.00 42.22 4.37
895 915 1.025113 TGAGAGCGTCTACGTGGGAG 61.025 60.000 0.00 0.00 42.22 4.30
896 916 1.002379 AGAGCGTCTACGTGGGAGT 60.002 57.895 0.00 0.00 42.22 3.85
897 917 1.136984 GAGCGTCTACGTGGGAGTG 59.863 63.158 0.00 0.00 42.22 3.51
898 918 2.181021 GCGTCTACGTGGGAGTGG 59.819 66.667 0.00 0.00 42.22 4.00
899 919 2.633509 GCGTCTACGTGGGAGTGGT 61.634 63.158 0.00 0.00 42.22 4.16
900 920 1.962144 CGTCTACGTGGGAGTGGTT 59.038 57.895 0.00 0.00 34.11 3.67
901 921 0.316204 CGTCTACGTGGGAGTGGTTT 59.684 55.000 0.00 0.00 34.11 3.27
902 922 1.792006 GTCTACGTGGGAGTGGTTTG 58.208 55.000 0.00 0.00 0.00 2.93
903 923 0.034337 TCTACGTGGGAGTGGTTTGC 59.966 55.000 0.00 0.00 0.00 3.68
904 924 0.250124 CTACGTGGGAGTGGTTTGCA 60.250 55.000 0.00 0.00 0.00 4.08
905 925 0.533308 TACGTGGGAGTGGTTTGCAC 60.533 55.000 0.00 0.00 0.00 4.57
906 926 2.892334 CGTGGGAGTGGTTTGCACG 61.892 63.158 0.00 0.00 0.00 5.34
907 927 2.904866 TGGGAGTGGTTTGCACGC 60.905 61.111 0.00 0.00 0.00 5.34
908 928 3.670377 GGGAGTGGTTTGCACGCC 61.670 66.667 0.00 0.00 40.97 5.68
909 929 4.025401 GGAGTGGTTTGCACGCCG 62.025 66.667 0.00 0.00 33.19 6.46
910 930 4.025401 GAGTGGTTTGCACGCCGG 62.025 66.667 0.00 0.00 0.00 6.13
1171 1196 4.101448 GGACCTCCAGCACCGCAT 62.101 66.667 0.00 0.00 35.64 4.73
1266 1291 4.509600 CCAATCCTCTCGCTTGAATACTTC 59.490 45.833 0.00 0.00 0.00 3.01
1280 1305 4.164221 TGAATACTTCTTCTCCCATCACCC 59.836 45.833 0.00 0.00 0.00 4.61
1428 1456 6.531240 TGTCGTTGAGGAAATTACCGTATTAC 59.469 38.462 0.00 0.00 34.73 1.89
1629 1657 5.159209 CACATTTCTGTTGCTGATTCCTTC 58.841 41.667 0.00 0.00 31.62 3.46
1768 1796 3.371898 GGTATTCAGCATTGCAAAAAGCC 59.628 43.478 11.91 7.27 44.83 4.35
1845 1873 2.609610 GGGGCCAGGGACAGTGTA 60.610 66.667 4.39 0.00 0.00 2.90
1850 1878 1.618888 GGCCAGGGACAGTGTAGTAGA 60.619 57.143 0.00 0.00 0.00 2.59
1878 1906 3.205784 AGAGATTAAGAGGGCACATGC 57.794 47.619 0.00 0.00 41.14 4.06
3140 3237 0.525761 GGCAACCGCTCATGCTTTAA 59.474 50.000 4.78 0.00 42.20 1.52
3160 3257 0.250858 CCCACAGACATGCTTCCACA 60.251 55.000 0.00 0.00 0.00 4.17
3268 3378 4.026475 GTGAGCATAATCAACGACTACAGC 60.026 45.833 0.00 0.00 0.00 4.40
3310 3424 1.286248 GTTAGGGTGGAGTCCATGGT 58.714 55.000 16.67 5.25 35.28 3.55
3592 3707 1.748493 GCTGAGACTACCAGACTCCAG 59.252 57.143 0.00 0.00 36.43 3.86
4559 4674 0.322975 TCTTCAGGAAGCTGAGGTGC 59.677 55.000 4.15 0.00 38.28 5.01
5265 5380 5.221803 ACTCATAATATGTCCCAGGCTCTTG 60.222 44.000 0.00 0.00 0.00 3.02
5392 5509 9.276590 CCATGTTCATGTTGTATATGTATGTCT 57.723 33.333 11.13 0.00 0.00 3.41
5517 5667 4.646945 TCATATTCTGATAGATCCCTCGGC 59.353 45.833 0.00 0.00 0.00 5.54
5667 5821 9.525409 AAACTATAATGATTTGCTTGCAGATTC 57.475 29.630 0.27 0.00 0.00 2.52
5668 5822 8.461249 ACTATAATGATTTGCTTGCAGATTCT 57.539 30.769 0.27 0.00 0.00 2.40
5669 5823 8.910944 ACTATAATGATTTGCTTGCAGATTCTT 58.089 29.630 0.27 1.26 0.00 2.52
5670 5824 9.745880 CTATAATGATTTGCTTGCAGATTCTTT 57.254 29.630 0.27 4.73 0.00 2.52
5679 5833 4.328169 GCTTGCAGATTCTTTAACATTGGC 59.672 41.667 0.00 0.00 0.00 4.52
5685 5839 6.678900 GCAGATTCTTTAACATTGGCGAATCT 60.679 38.462 0.00 0.00 44.50 2.40
5749 5905 4.040217 AGCATTTGCCAGGTTCAACAAATA 59.960 37.500 0.00 0.00 39.92 1.40
5883 6039 3.594134 AGTGCTCAGTGACAATTAGCTC 58.406 45.455 10.14 6.80 34.28 4.09
6055 6211 1.112113 GGGAAGCGACCTATCAGTCA 58.888 55.000 0.00 0.00 36.52 3.41
6137 6293 4.776743 CGCCTTCACATGTAATCTATTGC 58.223 43.478 0.00 0.00 0.00 3.56
6172 6328 7.938563 TGTGTTTTGCTACAAAATTATGTCC 57.061 32.000 8.57 0.00 34.75 4.02
6194 6350 5.359576 TCCCAACCATCTGTATTTGCATTAC 59.640 40.000 0.00 0.00 0.00 1.89
6293 6449 7.365741 CGTACTATTGGGATTACGACTACAAT 58.634 38.462 0.00 0.00 39.73 2.71
6326 6482 3.011818 TCATGACATGCGAGCAATTCTT 58.988 40.909 10.76 0.00 0.00 2.52
6362 6518 6.827727 TGTGAGCTTAAATAATACTCCCTCC 58.172 40.000 0.00 0.00 0.00 4.30
6368 6524 4.332428 AAATAATACTCCCTCCGTTCCG 57.668 45.455 0.00 0.00 0.00 4.30
6369 6525 2.734755 TAATACTCCCTCCGTTCCGA 57.265 50.000 0.00 0.00 0.00 4.55
6370 6526 1.856629 AATACTCCCTCCGTTCCGAA 58.143 50.000 0.00 0.00 0.00 4.30
6371 6527 2.083628 ATACTCCCTCCGTTCCGAAT 57.916 50.000 0.00 0.00 0.00 3.34
6372 6528 1.856629 TACTCCCTCCGTTCCGAATT 58.143 50.000 0.00 0.00 0.00 2.17
6373 6529 1.856629 ACTCCCTCCGTTCCGAATTA 58.143 50.000 0.00 0.00 0.00 1.40
6374 6530 1.479730 ACTCCCTCCGTTCCGAATTAC 59.520 52.381 0.00 0.00 0.00 1.89
6375 6531 1.755380 CTCCCTCCGTTCCGAATTACT 59.245 52.381 0.00 0.00 0.00 2.24
6376 6532 1.753073 TCCCTCCGTTCCGAATTACTC 59.247 52.381 0.00 0.00 0.00 2.59
6378 6534 1.133790 CCTCCGTTCCGAATTACTCGT 59.866 52.381 0.00 0.00 46.65 4.18
6379 6535 2.448219 CTCCGTTCCGAATTACTCGTC 58.552 52.381 0.00 0.00 46.65 4.20
6380 6536 2.086869 TCCGTTCCGAATTACTCGTCT 58.913 47.619 0.00 0.00 46.65 4.18
6381 6537 2.096496 TCCGTTCCGAATTACTCGTCTC 59.904 50.000 0.00 0.00 46.65 3.36
6382 6538 2.097142 CCGTTCCGAATTACTCGTCTCT 59.903 50.000 0.00 0.00 46.65 3.10
6383 6539 3.099362 CGTTCCGAATTACTCGTCTCTG 58.901 50.000 0.00 0.00 46.65 3.35
6384 6540 3.181513 CGTTCCGAATTACTCGTCTCTGA 60.182 47.826 0.00 0.00 46.65 3.27
6385 6541 4.670992 CGTTCCGAATTACTCGTCTCTGAA 60.671 45.833 0.00 0.00 46.65 3.02
6386 6542 5.159209 GTTCCGAATTACTCGTCTCTGAAA 58.841 41.667 0.00 0.00 46.65 2.69
6387 6543 5.578005 TCCGAATTACTCGTCTCTGAAAT 57.422 39.130 0.00 0.00 46.65 2.17
6388 6544 5.340803 TCCGAATTACTCGTCTCTGAAATG 58.659 41.667 0.00 0.00 46.65 2.32
6389 6545 4.504461 CCGAATTACTCGTCTCTGAAATGG 59.496 45.833 0.00 0.00 46.65 3.16
6390 6546 5.340803 CGAATTACTCGTCTCTGAAATGGA 58.659 41.667 0.00 0.00 42.89 3.41
6391 6547 5.980116 CGAATTACTCGTCTCTGAAATGGAT 59.020 40.000 0.00 0.00 42.89 3.41
6392 6548 6.074623 CGAATTACTCGTCTCTGAAATGGATG 60.075 42.308 0.00 0.00 42.89 3.51
6393 6549 5.661056 TTACTCGTCTCTGAAATGGATGT 57.339 39.130 0.00 0.00 0.00 3.06
6394 6550 6.769134 TTACTCGTCTCTGAAATGGATGTA 57.231 37.500 0.00 0.00 0.00 2.29
6395 6551 5.860941 ACTCGTCTCTGAAATGGATGTAT 57.139 39.130 0.00 0.00 0.00 2.29
6396 6552 5.837437 ACTCGTCTCTGAAATGGATGTATC 58.163 41.667 0.00 0.00 0.00 2.24
6397 6553 5.596361 ACTCGTCTCTGAAATGGATGTATCT 59.404 40.000 0.00 0.00 0.00 1.98
6398 6554 6.773200 ACTCGTCTCTGAAATGGATGTATCTA 59.227 38.462 0.00 0.00 0.00 1.98
6399 6555 7.040755 ACTCGTCTCTGAAATGGATGTATCTAG 60.041 40.741 0.00 0.00 0.00 2.43
6400 6556 6.998673 TCGTCTCTGAAATGGATGTATCTAGA 59.001 38.462 0.00 0.00 0.00 2.43
6401 6557 7.502561 TCGTCTCTGAAATGGATGTATCTAGAA 59.497 37.037 0.00 0.00 0.00 2.10
6402 6558 7.593273 CGTCTCTGAAATGGATGTATCTAGAAC 59.407 40.741 0.00 0.00 0.00 3.01
6403 6559 8.637986 GTCTCTGAAATGGATGTATCTAGAACT 58.362 37.037 0.00 0.00 0.00 3.01
6404 6560 9.868160 TCTCTGAAATGGATGTATCTAGAACTA 57.132 33.333 0.00 0.00 0.00 2.24
6425 6581 9.817809 GAACTAAAATACATCTAGACACATCCA 57.182 33.333 0.00 0.00 0.00 3.41
6429 6585 8.818141 AAAATACATCTAGACACATCCATACG 57.182 34.615 0.00 0.00 0.00 3.06
6430 6586 7.526142 AATACATCTAGACACATCCATACGT 57.474 36.000 0.00 0.00 0.00 3.57
6431 6587 5.188327 ACATCTAGACACATCCATACGTG 57.812 43.478 0.00 0.00 39.10 4.49
6432 6588 3.710326 TCTAGACACATCCATACGTGC 57.290 47.619 0.00 0.00 36.57 5.34
6433 6589 2.032924 TCTAGACACATCCATACGTGCG 59.967 50.000 0.00 0.00 36.57 5.34
6434 6590 0.815095 AGACACATCCATACGTGCGA 59.185 50.000 0.00 0.00 36.57 5.10
6435 6591 0.921347 GACACATCCATACGTGCGAC 59.079 55.000 0.00 0.00 36.57 5.19
6436 6592 0.245266 ACACATCCATACGTGCGACA 59.755 50.000 0.00 0.00 36.57 4.35
6437 6593 1.337354 ACACATCCATACGTGCGACAA 60.337 47.619 0.00 0.00 36.57 3.18
6438 6594 1.324435 CACATCCATACGTGCGACAAG 59.676 52.381 0.00 0.00 0.00 3.16
6439 6595 1.067142 ACATCCATACGTGCGACAAGT 60.067 47.619 0.00 0.00 0.00 3.16
6440 6596 2.164827 ACATCCATACGTGCGACAAGTA 59.835 45.455 0.00 7.72 33.49 2.24
6441 6597 3.183754 CATCCATACGTGCGACAAGTAA 58.816 45.455 0.00 0.00 32.82 2.24
6442 6598 3.513680 TCCATACGTGCGACAAGTAAT 57.486 42.857 0.00 0.00 32.82 1.89
6443 6599 3.852286 TCCATACGTGCGACAAGTAATT 58.148 40.909 0.00 0.00 32.82 1.40
6444 6600 3.861113 TCCATACGTGCGACAAGTAATTC 59.139 43.478 0.00 0.00 32.82 2.17
6445 6601 3.301579 CCATACGTGCGACAAGTAATTCG 60.302 47.826 0.00 0.00 32.82 3.34
6446 6602 1.065358 ACGTGCGACAAGTAATTCGG 58.935 50.000 0.00 0.00 35.73 4.30
6447 6603 1.336148 ACGTGCGACAAGTAATTCGGA 60.336 47.619 0.00 0.00 35.73 4.55
6448 6604 1.722464 CGTGCGACAAGTAATTCGGAA 59.278 47.619 0.00 0.00 37.32 4.30
6449 6605 2.471749 CGTGCGACAAGTAATTCGGAAC 60.472 50.000 0.00 0.00 37.32 3.62
6463 6619 2.809952 GGAACGGAGGGAGTAGGAG 58.190 63.158 0.00 0.00 0.00 3.69
6464 6620 1.393487 GGAACGGAGGGAGTAGGAGC 61.393 65.000 0.00 0.00 0.00 4.70
6465 6621 0.396001 GAACGGAGGGAGTAGGAGCT 60.396 60.000 0.00 0.00 0.00 4.09
6466 6622 0.924823 AACGGAGGGAGTAGGAGCTA 59.075 55.000 0.00 0.00 0.00 3.32
6467 6623 0.924823 ACGGAGGGAGTAGGAGCTAA 59.075 55.000 0.00 0.00 0.00 3.09
6468 6624 1.287146 ACGGAGGGAGTAGGAGCTAAA 59.713 52.381 0.00 0.00 0.00 1.85
6469 6625 1.682323 CGGAGGGAGTAGGAGCTAAAC 59.318 57.143 0.00 0.00 0.00 2.01
6470 6626 2.687314 CGGAGGGAGTAGGAGCTAAACT 60.687 54.545 0.00 0.00 0.00 2.66
6471 6627 2.696187 GGAGGGAGTAGGAGCTAAACTG 59.304 54.545 0.13 0.00 0.00 3.16
6472 6628 3.367321 GAGGGAGTAGGAGCTAAACTGT 58.633 50.000 0.13 0.00 0.00 3.55
6473 6629 3.770388 GAGGGAGTAGGAGCTAAACTGTT 59.230 47.826 0.13 0.00 0.00 3.16
6474 6630 3.515901 AGGGAGTAGGAGCTAAACTGTTG 59.484 47.826 0.00 0.00 0.00 3.33
6475 6631 3.261137 GGGAGTAGGAGCTAAACTGTTGT 59.739 47.826 0.00 0.00 0.00 3.32
6476 6632 4.246458 GGAGTAGGAGCTAAACTGTTGTG 58.754 47.826 0.00 0.00 0.00 3.33
6477 6633 3.665190 AGTAGGAGCTAAACTGTTGTGC 58.335 45.455 9.15 9.15 0.00 4.57
6478 6634 2.938956 AGGAGCTAAACTGTTGTGCT 57.061 45.000 16.70 16.70 36.63 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 6.756074 TGCGTGAAGTTTCTTCAAATTCAATT 59.244 30.769 12.74 0.00 32.13 2.32
36 37 6.272318 TGCGTGAAGTTTCTTCAAATTCAAT 58.728 32.000 12.74 0.00 32.13 2.57
104 113 6.937457 GTAAACTCGTTTACTCCGTTTTTCT 58.063 36.000 19.96 0.00 46.81 2.52
113 132 7.567590 CGGTTTAACCTGTAAACTCGTTTACTC 60.568 40.741 24.70 8.15 42.31 2.59
114 133 6.200854 CGGTTTAACCTGTAAACTCGTTTACT 59.799 38.462 24.70 12.84 42.31 2.24
115 134 6.354858 CGGTTTAACCTGTAAACTCGTTTAC 58.645 40.000 20.27 20.27 42.19 2.01
116 135 5.050431 GCGGTTTAACCTGTAAACTCGTTTA 60.050 40.000 12.66 0.00 37.51 2.01
122 141 3.566742 CCTTGCGGTTTAACCTGTAAACT 59.433 43.478 12.66 0.00 37.51 2.66
127 146 2.351706 TTCCTTGCGGTTTAACCTGT 57.648 45.000 12.66 0.00 35.66 4.00
185 204 4.065789 CCGGCCCATCTAGAGTTTTATTC 58.934 47.826 0.00 0.00 0.00 1.75
188 207 1.140252 GCCGGCCCATCTAGAGTTTTA 59.860 52.381 18.11 0.00 0.00 1.52
198 217 2.358737 CGAATAGGCCGGCCCATC 60.359 66.667 41.72 32.22 36.58 3.51
245 264 0.039472 TGGGCTGGAGCTTGCATTAA 59.961 50.000 9.01 0.00 41.70 1.40
246 265 0.680921 GTGGGCTGGAGCTTGCATTA 60.681 55.000 9.01 0.00 41.70 1.90
247 266 1.980772 GTGGGCTGGAGCTTGCATT 60.981 57.895 9.01 0.00 41.70 3.56
248 267 2.362120 GTGGGCTGGAGCTTGCAT 60.362 61.111 9.01 0.00 41.70 3.96
250 269 3.984193 ATCGTGGGCTGGAGCTTGC 62.984 63.158 0.00 0.00 41.70 4.01
251 270 1.817099 GATCGTGGGCTGGAGCTTG 60.817 63.158 0.00 0.00 41.70 4.01
252 271 2.586792 GATCGTGGGCTGGAGCTT 59.413 61.111 0.00 0.00 41.70 3.74
253 272 3.474570 GGATCGTGGGCTGGAGCT 61.475 66.667 0.00 0.00 41.70 4.09
254 273 4.554036 GGGATCGTGGGCTGGAGC 62.554 72.222 0.00 0.00 41.14 4.70
255 274 3.866582 GGGGATCGTGGGCTGGAG 61.867 72.222 0.00 0.00 0.00 3.86
256 275 4.414956 AGGGGATCGTGGGCTGGA 62.415 66.667 0.00 0.00 0.00 3.86
257 276 3.866582 GAGGGGATCGTGGGCTGG 61.867 72.222 0.00 0.00 0.00 4.85
258 277 1.987807 AATGAGGGGATCGTGGGCTG 61.988 60.000 0.00 0.00 0.00 4.85
259 278 0.399949 TAATGAGGGGATCGTGGGCT 60.400 55.000 0.00 0.00 0.00 5.19
260 279 0.693049 ATAATGAGGGGATCGTGGGC 59.307 55.000 0.00 0.00 0.00 5.36
261 280 1.279271 GGATAATGAGGGGATCGTGGG 59.721 57.143 0.00 0.00 0.00 4.61
262 281 1.279271 GGGATAATGAGGGGATCGTGG 59.721 57.143 0.00 0.00 0.00 4.94
263 282 2.027745 CAGGGATAATGAGGGGATCGTG 60.028 54.545 0.00 0.00 0.00 4.35
264 283 2.260822 CAGGGATAATGAGGGGATCGT 58.739 52.381 0.00 0.00 0.00 3.73
265 284 2.260822 ACAGGGATAATGAGGGGATCG 58.739 52.381 0.00 0.00 0.00 3.69
266 285 7.339482 GTTTATACAGGGATAATGAGGGGATC 58.661 42.308 0.00 0.00 0.00 3.36
267 286 6.217693 GGTTTATACAGGGATAATGAGGGGAT 59.782 42.308 0.00 0.00 0.00 3.85
268 287 5.550403 GGTTTATACAGGGATAATGAGGGGA 59.450 44.000 0.00 0.00 0.00 4.81
269 288 5.551977 AGGTTTATACAGGGATAATGAGGGG 59.448 44.000 0.00 0.00 0.00 4.79
270 289 6.704056 AGGTTTATACAGGGATAATGAGGG 57.296 41.667 0.00 0.00 0.00 4.30
271 290 6.431234 GCAAGGTTTATACAGGGATAATGAGG 59.569 42.308 0.00 0.00 0.00 3.86
272 291 7.227156 AGCAAGGTTTATACAGGGATAATGAG 58.773 38.462 0.00 0.00 0.00 2.90
273 292 7.149202 AGCAAGGTTTATACAGGGATAATGA 57.851 36.000 0.00 0.00 0.00 2.57
274 293 8.157476 AGTAGCAAGGTTTATACAGGGATAATG 58.843 37.037 0.00 0.00 0.00 1.90
275 294 8.276453 AGTAGCAAGGTTTATACAGGGATAAT 57.724 34.615 0.00 0.00 0.00 1.28
276 295 7.685849 AGTAGCAAGGTTTATACAGGGATAA 57.314 36.000 0.00 0.00 0.00 1.75
277 296 8.967779 ATAGTAGCAAGGTTTATACAGGGATA 57.032 34.615 0.00 0.00 0.00 2.59
278 297 7.735321 AGATAGTAGCAAGGTTTATACAGGGAT 59.265 37.037 0.00 0.00 0.00 3.85
279 298 7.073854 AGATAGTAGCAAGGTTTATACAGGGA 58.926 38.462 0.00 0.00 0.00 4.20
280 299 7.304497 AGATAGTAGCAAGGTTTATACAGGG 57.696 40.000 0.00 0.00 0.00 4.45
289 308 9.601217 CAACACTTATTAGATAGTAGCAAGGTT 57.399 33.333 0.00 0.00 0.00 3.50
290 309 8.204836 CCAACACTTATTAGATAGTAGCAAGGT 58.795 37.037 0.00 0.00 0.00 3.50
291 310 8.204836 ACCAACACTTATTAGATAGTAGCAAGG 58.795 37.037 0.00 0.00 0.00 3.61
295 314 9.857957 GGATACCAACACTTATTAGATAGTAGC 57.142 37.037 0.00 0.00 0.00 3.58
326 345 7.758076 GGTAAACCAGCGCTTTATTAGATTTTT 59.242 33.333 7.50 0.00 35.64 1.94
327 346 7.255569 GGTAAACCAGCGCTTTATTAGATTTT 58.744 34.615 7.50 1.36 35.64 1.82
328 347 6.457799 CGGTAAACCAGCGCTTTATTAGATTT 60.458 38.462 7.50 0.00 41.87 2.17
329 348 5.007332 CGGTAAACCAGCGCTTTATTAGATT 59.993 40.000 7.50 0.00 41.87 2.40
330 349 4.510340 CGGTAAACCAGCGCTTTATTAGAT 59.490 41.667 7.50 0.00 41.87 1.98
331 350 3.866910 CGGTAAACCAGCGCTTTATTAGA 59.133 43.478 7.50 0.00 41.87 2.10
332 351 4.191662 CGGTAAACCAGCGCTTTATTAG 57.808 45.455 7.50 0.00 41.87 1.73
342 361 2.785713 TTTTTGAGCGGTAAACCAGC 57.214 45.000 0.00 4.14 36.35 4.85
361 380 9.696917 CCAGTTATTGAGCTTTCATTAACTTTT 57.303 29.630 15.30 0.84 41.17 2.27
362 381 7.814587 GCCAGTTATTGAGCTTTCATTAACTTT 59.185 33.333 15.30 1.33 41.17 2.66
363 382 7.315890 GCCAGTTATTGAGCTTTCATTAACTT 58.684 34.615 15.30 4.85 41.17 2.66
364 383 6.403636 CGCCAGTTATTGAGCTTTCATTAACT 60.404 38.462 13.42 13.42 42.53 2.24
365 384 5.739161 CGCCAGTTATTGAGCTTTCATTAAC 59.261 40.000 10.50 10.50 37.02 2.01
396 415 1.410004 TTCCCAGATCTATTCGGCGT 58.590 50.000 6.85 0.00 0.00 5.68
424 444 1.926511 GCCTCACGAAACTGCATGGG 61.927 60.000 0.00 0.00 0.00 4.00
425 445 1.503542 GCCTCACGAAACTGCATGG 59.496 57.895 0.00 0.00 0.00 3.66
447 467 1.220749 GACATAGGCGCAACTGGGA 59.779 57.895 10.83 0.00 0.00 4.37
503 523 8.663911 GGAACATTCTTTGAACATTGTCAAAAA 58.336 29.630 12.34 10.54 44.66 1.94
504 524 8.040132 AGGAACATTCTTTGAACATTGTCAAAA 58.960 29.630 12.34 6.38 44.66 2.44
505 525 7.492020 CAGGAACATTCTTTGAACATTGTCAAA 59.508 33.333 11.36 11.36 43.51 2.69
506 526 6.979817 CAGGAACATTCTTTGAACATTGTCAA 59.020 34.615 0.00 0.00 35.72 3.18
507 527 6.096705 ACAGGAACATTCTTTGAACATTGTCA 59.903 34.615 0.00 0.00 0.00 3.58
508 528 6.507023 ACAGGAACATTCTTTGAACATTGTC 58.493 36.000 0.00 0.00 0.00 3.18
509 529 6.469782 ACAGGAACATTCTTTGAACATTGT 57.530 33.333 4.45 0.00 0.00 2.71
510 530 7.775397 AAACAGGAACATTCTTTGAACATTG 57.225 32.000 4.45 0.00 0.00 2.82
511 531 9.883142 TTAAAACAGGAACATTCTTTGAACATT 57.117 25.926 4.45 0.00 0.00 2.71
512 532 9.883142 TTTAAAACAGGAACATTCTTTGAACAT 57.117 25.926 0.00 0.00 0.00 2.71
513 533 9.712305 TTTTAAAACAGGAACATTCTTTGAACA 57.288 25.926 0.00 0.00 0.00 3.18
543 563 9.695526 CTCCTGAAATAAATGAAAACATGAACA 57.304 29.630 0.00 0.00 0.00 3.18
544 564 9.696917 ACTCCTGAAATAAATGAAAACATGAAC 57.303 29.630 0.00 0.00 0.00 3.18
614 634 9.075678 ACATTTCTTGAATCTGTGAAGAAAGAT 57.924 29.630 0.00 0.00 44.65 2.40
615 635 8.455903 ACATTTCTTGAATCTGTGAAGAAAGA 57.544 30.769 0.00 0.00 44.65 2.52
616 636 9.178427 GAACATTTCTTGAATCTGTGAAGAAAG 57.822 33.333 0.00 0.00 44.65 2.62
617 637 8.906867 AGAACATTTCTTGAATCTGTGAAGAAA 58.093 29.630 0.00 0.00 45.19 2.52
618 638 8.455903 AGAACATTTCTTGAATCTGTGAAGAA 57.544 30.769 0.00 0.00 36.36 2.52
633 653 9.671279 AACAAATTTGGAAAGAAGAACATTTCT 57.329 25.926 21.74 0.00 43.15 2.52
634 654 9.920826 GAACAAATTTGGAAAGAAGAACATTTC 57.079 29.630 21.74 7.67 35.19 2.17
635 655 9.447157 TGAACAAATTTGGAAAGAAGAACATTT 57.553 25.926 21.74 2.23 0.00 2.32
636 656 8.882736 GTGAACAAATTTGGAAAGAAGAACATT 58.117 29.630 21.74 2.65 0.00 2.71
637 657 8.040132 TGTGAACAAATTTGGAAAGAAGAACAT 58.960 29.630 21.74 0.00 0.00 2.71
638 658 7.382110 TGTGAACAAATTTGGAAAGAAGAACA 58.618 30.769 21.74 9.67 0.00 3.18
639 659 7.826260 TGTGAACAAATTTGGAAAGAAGAAC 57.174 32.000 21.74 7.57 0.00 3.01
640 660 8.256605 TGATGTGAACAAATTTGGAAAGAAGAA 58.743 29.630 21.74 0.00 0.00 2.52
641 661 7.780064 TGATGTGAACAAATTTGGAAAGAAGA 58.220 30.769 21.74 1.33 0.00 2.87
642 662 8.597662 ATGATGTGAACAAATTTGGAAAGAAG 57.402 30.769 21.74 0.00 0.00 2.85
643 663 7.381948 CGATGATGTGAACAAATTTGGAAAGAA 59.618 33.333 21.74 3.98 0.00 2.52
644 664 6.862608 CGATGATGTGAACAAATTTGGAAAGA 59.137 34.615 21.74 5.94 0.00 2.52
645 665 6.862608 TCGATGATGTGAACAAATTTGGAAAG 59.137 34.615 21.74 0.00 0.00 2.62
646 666 6.743110 TCGATGATGTGAACAAATTTGGAAA 58.257 32.000 21.74 4.18 0.00 3.13
647 667 6.324561 TCGATGATGTGAACAAATTTGGAA 57.675 33.333 21.74 4.54 0.00 3.53
648 668 5.956068 TCGATGATGTGAACAAATTTGGA 57.044 34.783 21.74 3.14 0.00 3.53
649 669 7.116662 ACATTTCGATGATGTGAACAAATTTGG 59.883 33.333 21.74 4.79 36.43 3.28
650 670 8.009984 ACATTTCGATGATGTGAACAAATTTG 57.990 30.769 16.67 16.67 36.43 2.32
651 671 8.592105 AACATTTCGATGATGTGAACAAATTT 57.408 26.923 13.65 0.00 37.76 1.82
652 672 8.592105 AAACATTTCGATGATGTGAACAAATT 57.408 26.923 13.65 2.90 37.76 1.82
653 673 9.859427 ATAAACATTTCGATGATGTGAACAAAT 57.141 25.926 13.65 0.00 37.76 2.32
654 674 9.127006 CATAAACATTTCGATGATGTGAACAAA 57.873 29.630 13.65 0.00 37.76 2.83
655 675 8.296000 ACATAAACATTTCGATGATGTGAACAA 58.704 29.630 13.65 2.19 37.76 2.83
656 676 7.815641 ACATAAACATTTCGATGATGTGAACA 58.184 30.769 13.65 0.00 37.76 3.18
657 677 8.673626 AACATAAACATTTCGATGATGTGAAC 57.326 30.769 13.65 0.00 37.76 3.18
658 678 9.689976 AAAACATAAACATTTCGATGATGTGAA 57.310 25.926 13.65 7.29 37.76 3.18
735 755 6.913132 TGCAACTGAATTTTTCGAAATTACGA 59.087 30.769 12.12 0.00 40.55 3.43
736 756 7.088097 TGCAACTGAATTTTTCGAAATTACG 57.912 32.000 12.12 1.76 32.92 3.18
737 757 7.169140 ACCTGCAACTGAATTTTTCGAAATTAC 59.831 33.333 12.12 4.89 32.92 1.89
738 758 7.206687 ACCTGCAACTGAATTTTTCGAAATTA 58.793 30.769 12.12 3.53 32.92 1.40
739 759 6.048509 ACCTGCAACTGAATTTTTCGAAATT 58.951 32.000 12.12 3.74 35.26 1.82
740 760 5.600696 ACCTGCAACTGAATTTTTCGAAAT 58.399 33.333 12.12 0.00 0.00 2.17
741 761 5.004922 ACCTGCAACTGAATTTTTCGAAA 57.995 34.783 6.47 6.47 0.00 3.46
742 762 4.499019 GGACCTGCAACTGAATTTTTCGAA 60.499 41.667 0.00 0.00 0.00 3.71
743 763 3.004315 GGACCTGCAACTGAATTTTTCGA 59.996 43.478 0.00 0.00 0.00 3.71
744 764 3.004734 AGGACCTGCAACTGAATTTTTCG 59.995 43.478 0.00 0.00 0.00 3.46
745 765 4.550422 GAGGACCTGCAACTGAATTTTTC 58.450 43.478 0.00 0.00 0.00 2.29
746 766 3.004734 CGAGGACCTGCAACTGAATTTTT 59.995 43.478 0.00 0.00 0.00 1.94
747 767 2.554032 CGAGGACCTGCAACTGAATTTT 59.446 45.455 0.00 0.00 0.00 1.82
748 768 2.154462 CGAGGACCTGCAACTGAATTT 58.846 47.619 0.00 0.00 0.00 1.82
749 769 1.611673 CCGAGGACCTGCAACTGAATT 60.612 52.381 0.00 0.00 0.00 2.17
750 770 0.036010 CCGAGGACCTGCAACTGAAT 60.036 55.000 0.00 0.00 0.00 2.57
751 771 1.371183 CCGAGGACCTGCAACTGAA 59.629 57.895 0.00 0.00 0.00 3.02
752 772 1.407656 AACCGAGGACCTGCAACTGA 61.408 55.000 0.00 0.00 0.00 3.41
753 773 0.320374 TAACCGAGGACCTGCAACTG 59.680 55.000 0.00 0.00 0.00 3.16
754 774 0.608640 CTAACCGAGGACCTGCAACT 59.391 55.000 0.00 0.00 0.00 3.16
755 775 0.606604 TCTAACCGAGGACCTGCAAC 59.393 55.000 0.00 0.00 0.00 4.17
756 776 0.606604 GTCTAACCGAGGACCTGCAA 59.393 55.000 0.00 0.00 0.00 4.08
757 777 1.255667 GGTCTAACCGAGGACCTGCA 61.256 60.000 0.00 0.00 45.99 4.41
758 778 1.516423 GGTCTAACCGAGGACCTGC 59.484 63.158 0.00 0.00 45.99 4.85
762 782 2.762327 TGTATTGGGTCTAACCGAGGAC 59.238 50.000 0.00 0.00 39.83 3.85
763 783 3.104519 TGTATTGGGTCTAACCGAGGA 57.895 47.619 0.00 0.00 39.83 3.71
764 784 3.494398 CCATGTATTGGGTCTAACCGAGG 60.494 52.174 0.00 0.00 42.33 4.63
765 785 3.386726 TCCATGTATTGGGTCTAACCGAG 59.613 47.826 0.00 0.00 46.45 4.63
766 786 3.133362 GTCCATGTATTGGGTCTAACCGA 59.867 47.826 0.00 0.00 46.45 4.69
767 787 3.134081 AGTCCATGTATTGGGTCTAACCG 59.866 47.826 0.00 0.00 46.45 4.44
768 788 4.451900 CAGTCCATGTATTGGGTCTAACC 58.548 47.826 0.00 0.00 46.45 2.85
769 789 3.877508 GCAGTCCATGTATTGGGTCTAAC 59.122 47.826 0.00 0.00 46.45 2.34
770 790 3.521531 TGCAGTCCATGTATTGGGTCTAA 59.478 43.478 0.00 0.00 46.45 2.10
771 791 3.111484 TGCAGTCCATGTATTGGGTCTA 58.889 45.455 0.00 0.00 46.45 2.59
772 792 1.915489 TGCAGTCCATGTATTGGGTCT 59.085 47.619 0.00 0.00 46.45 3.85
773 793 2.292267 CTGCAGTCCATGTATTGGGTC 58.708 52.381 5.25 0.00 46.45 4.46
774 794 1.635487 ACTGCAGTCCATGTATTGGGT 59.365 47.619 15.25 0.00 46.45 4.51
775 795 2.425143 ACTGCAGTCCATGTATTGGG 57.575 50.000 15.25 0.00 46.45 4.12
777 797 4.925054 CCAAAAACTGCAGTCCATGTATTG 59.075 41.667 21.95 15.64 0.00 1.90
778 798 4.021192 CCCAAAAACTGCAGTCCATGTATT 60.021 41.667 21.95 5.78 0.00 1.89
779 799 3.511146 CCCAAAAACTGCAGTCCATGTAT 59.489 43.478 21.95 0.00 0.00 2.29
780 800 2.890311 CCCAAAAACTGCAGTCCATGTA 59.110 45.455 21.95 0.00 0.00 2.29
781 801 1.688197 CCCAAAAACTGCAGTCCATGT 59.312 47.619 21.95 0.00 0.00 3.21
782 802 1.962807 TCCCAAAAACTGCAGTCCATG 59.037 47.619 21.95 17.74 0.00 3.66
783 803 2.380064 TCCCAAAAACTGCAGTCCAT 57.620 45.000 21.95 6.89 0.00 3.41
784 804 2.380064 ATCCCAAAAACTGCAGTCCA 57.620 45.000 21.95 0.00 0.00 4.02
785 805 3.751479 AAATCCCAAAAACTGCAGTCC 57.249 42.857 21.95 0.00 0.00 3.85
804 824 9.565213 CAAAACTGGAACATTAATTTGCAAAAA 57.435 25.926 17.19 7.39 38.20 1.94
805 825 8.734386 ACAAAACTGGAACATTAATTTGCAAAA 58.266 25.926 17.19 0.00 38.20 2.44
806 826 8.273780 ACAAAACTGGAACATTAATTTGCAAA 57.726 26.923 15.44 15.44 38.20 3.68
807 827 7.254252 CGACAAAACTGGAACATTAATTTGCAA 60.254 33.333 0.00 0.00 38.20 4.08
808 828 6.199908 CGACAAAACTGGAACATTAATTTGCA 59.800 34.615 0.00 0.00 38.20 4.08
809 829 6.580476 CGACAAAACTGGAACATTAATTTGC 58.420 36.000 0.00 0.00 38.20 3.68
810 830 6.420604 AGCGACAAAACTGGAACATTAATTTG 59.579 34.615 0.00 0.00 38.20 2.32
811 831 6.420604 CAGCGACAAAACTGGAACATTAATTT 59.579 34.615 0.00 0.00 38.20 1.82
812 832 5.920273 CAGCGACAAAACTGGAACATTAATT 59.080 36.000 0.00 0.00 38.20 1.40
813 833 5.009610 ACAGCGACAAAACTGGAACATTAAT 59.990 36.000 0.00 0.00 38.20 1.40
814 834 4.336993 ACAGCGACAAAACTGGAACATTAA 59.663 37.500 0.00 0.00 38.20 1.40
815 835 3.880490 ACAGCGACAAAACTGGAACATTA 59.120 39.130 0.00 0.00 38.20 1.90
816 836 2.687935 ACAGCGACAAAACTGGAACATT 59.312 40.909 0.00 0.00 38.20 2.71
817 837 2.290641 GACAGCGACAAAACTGGAACAT 59.709 45.455 0.00 0.00 38.20 2.71
818 838 1.668751 GACAGCGACAAAACTGGAACA 59.331 47.619 0.00 0.00 38.25 3.18
819 839 1.332904 CGACAGCGACAAAACTGGAAC 60.333 52.381 0.00 0.00 40.82 3.62
820 840 0.934496 CGACAGCGACAAAACTGGAA 59.066 50.000 0.00 0.00 40.82 3.53
821 841 0.179094 ACGACAGCGACAAAACTGGA 60.179 50.000 0.00 0.00 41.64 3.86
822 842 1.191647 GTACGACAGCGACAAAACTGG 59.808 52.381 0.00 0.00 41.64 4.00
823 843 1.136992 CGTACGACAGCGACAAAACTG 60.137 52.381 10.44 0.00 41.64 3.16
824 844 1.126079 CGTACGACAGCGACAAAACT 58.874 50.000 10.44 0.00 41.64 2.66
825 845 0.848305 ACGTACGACAGCGACAAAAC 59.152 50.000 24.41 0.00 41.64 2.43
826 846 0.847670 CACGTACGACAGCGACAAAA 59.152 50.000 24.41 0.00 41.64 2.44
827 847 0.248580 ACACGTACGACAGCGACAAA 60.249 50.000 24.41 0.00 41.64 2.83
828 848 0.658244 GACACGTACGACAGCGACAA 60.658 55.000 24.41 0.00 41.64 3.18
829 849 1.082561 GACACGTACGACAGCGACA 60.083 57.895 24.41 0.00 41.64 4.35
830 850 0.385223 AAGACACGTACGACAGCGAC 60.385 55.000 24.41 5.84 41.64 5.19
831 851 0.308684 AAAGACACGTACGACAGCGA 59.691 50.000 24.41 0.00 41.64 4.93
832 852 1.954437 TAAAGACACGTACGACAGCG 58.046 50.000 24.41 7.04 44.79 5.18
833 853 4.149396 ACATTTAAAGACACGTACGACAGC 59.851 41.667 24.41 8.10 0.00 4.40
834 854 5.817616 ACATTTAAAGACACGTACGACAG 57.182 39.130 24.41 13.48 0.00 3.51
835 855 5.556758 GCAACATTTAAAGACACGTACGACA 60.557 40.000 24.41 0.00 0.00 4.35
836 856 4.837050 GCAACATTTAAAGACACGTACGAC 59.163 41.667 24.41 12.52 0.00 4.34
837 857 4.375205 CGCAACATTTAAAGACACGTACGA 60.375 41.667 24.41 0.00 0.00 3.43
838 858 3.830882 CGCAACATTTAAAGACACGTACG 59.169 43.478 15.01 15.01 0.00 3.67
839 859 3.596562 GCGCAACATTTAAAGACACGTAC 59.403 43.478 0.30 0.00 0.00 3.67
840 860 3.495377 AGCGCAACATTTAAAGACACGTA 59.505 39.130 11.47 0.00 0.00 3.57
841 861 2.289547 AGCGCAACATTTAAAGACACGT 59.710 40.909 11.47 0.00 0.00 4.49
842 862 2.651703 CAGCGCAACATTTAAAGACACG 59.348 45.455 11.47 0.00 0.00 4.49
843 863 2.405025 GCAGCGCAACATTTAAAGACAC 59.595 45.455 11.47 0.00 0.00 3.67
844 864 2.606795 GGCAGCGCAACATTTAAAGACA 60.607 45.455 11.47 0.00 0.00 3.41
845 865 1.985684 GGCAGCGCAACATTTAAAGAC 59.014 47.619 11.47 0.00 0.00 3.01
846 866 1.611006 TGGCAGCGCAACATTTAAAGA 59.389 42.857 11.47 0.00 0.00 2.52
847 867 2.063156 TGGCAGCGCAACATTTAAAG 57.937 45.000 11.47 0.00 0.00 1.85
848 868 2.515926 TTGGCAGCGCAACATTTAAA 57.484 40.000 11.47 0.00 0.00 1.52
849 869 2.739885 ATTGGCAGCGCAACATTTAA 57.260 40.000 11.47 0.00 0.00 1.52
850 870 2.735663 CAAATTGGCAGCGCAACATTTA 59.264 40.909 11.47 0.00 0.00 1.40
851 871 1.532007 CAAATTGGCAGCGCAACATTT 59.468 42.857 11.47 5.29 0.00 2.32
852 872 1.149987 CAAATTGGCAGCGCAACATT 58.850 45.000 11.47 0.00 0.00 2.71
853 873 0.317799 TCAAATTGGCAGCGCAACAT 59.682 45.000 11.47 0.00 0.00 2.71
854 874 0.103755 TTCAAATTGGCAGCGCAACA 59.896 45.000 11.47 1.61 0.00 3.33
855 875 0.508213 GTTCAAATTGGCAGCGCAAC 59.492 50.000 11.47 0.00 0.00 4.17
856 876 0.103755 TGTTCAAATTGGCAGCGCAA 59.896 45.000 11.47 0.00 0.00 4.85
857 877 0.317799 ATGTTCAAATTGGCAGCGCA 59.682 45.000 11.47 0.00 0.00 6.09
858 878 0.717224 CATGTTCAAATTGGCAGCGC 59.283 50.000 0.00 0.00 0.00 5.92
859 879 2.095110 TCTCATGTTCAAATTGGCAGCG 60.095 45.455 0.00 0.00 0.00 5.18
860 880 3.508762 CTCTCATGTTCAAATTGGCAGC 58.491 45.455 0.00 0.00 0.00 5.25
861 881 3.508762 GCTCTCATGTTCAAATTGGCAG 58.491 45.455 0.00 0.00 0.00 4.85
862 882 2.095110 CGCTCTCATGTTCAAATTGGCA 60.095 45.455 0.00 0.00 0.00 4.92
863 883 2.095059 ACGCTCTCATGTTCAAATTGGC 60.095 45.455 0.00 0.00 0.00 4.52
864 884 3.438087 AGACGCTCTCATGTTCAAATTGG 59.562 43.478 0.00 0.00 0.00 3.16
865 885 4.675190 AGACGCTCTCATGTTCAAATTG 57.325 40.909 0.00 0.00 0.00 2.32
866 886 4.327357 CGTAGACGCTCTCATGTTCAAATT 59.673 41.667 0.00 0.00 0.00 1.82
867 887 3.859961 CGTAGACGCTCTCATGTTCAAAT 59.140 43.478 0.00 0.00 0.00 2.32
868 888 3.242518 CGTAGACGCTCTCATGTTCAAA 58.757 45.455 0.00 0.00 0.00 2.69
869 889 2.228103 ACGTAGACGCTCTCATGTTCAA 59.772 45.455 1.14 0.00 44.43 2.69
870 890 1.810755 ACGTAGACGCTCTCATGTTCA 59.189 47.619 1.14 0.00 44.43 3.18
871 891 2.177977 CACGTAGACGCTCTCATGTTC 58.822 52.381 1.14 0.00 44.43 3.18
872 892 1.135373 CCACGTAGACGCTCTCATGTT 60.135 52.381 1.14 0.00 44.43 2.71
873 893 0.452184 CCACGTAGACGCTCTCATGT 59.548 55.000 1.14 0.00 44.43 3.21
874 894 0.248661 CCCACGTAGACGCTCTCATG 60.249 60.000 1.14 0.00 44.43 3.07
875 895 0.393944 TCCCACGTAGACGCTCTCAT 60.394 55.000 1.14 0.00 44.43 2.90
876 896 1.002990 TCCCACGTAGACGCTCTCA 60.003 57.895 1.14 0.00 44.43 3.27
877 897 1.025647 ACTCCCACGTAGACGCTCTC 61.026 60.000 1.14 0.00 44.43 3.20
878 898 1.002379 ACTCCCACGTAGACGCTCT 60.002 57.895 1.14 0.00 44.43 4.09
879 899 1.136984 CACTCCCACGTAGACGCTC 59.863 63.158 1.14 0.00 44.43 5.03
880 900 2.341101 CCACTCCCACGTAGACGCT 61.341 63.158 1.14 0.00 44.43 5.07
881 901 2.151049 AACCACTCCCACGTAGACGC 62.151 60.000 1.14 0.00 44.43 5.19
882 902 0.316204 AAACCACTCCCACGTAGACG 59.684 55.000 0.00 0.00 46.33 4.18
883 903 1.792006 CAAACCACTCCCACGTAGAC 58.208 55.000 0.00 0.00 0.00 2.59
884 904 0.034337 GCAAACCACTCCCACGTAGA 59.966 55.000 0.00 0.00 0.00 2.59
885 905 0.250124 TGCAAACCACTCCCACGTAG 60.250 55.000 0.00 0.00 0.00 3.51
886 906 0.533308 GTGCAAACCACTCCCACGTA 60.533 55.000 0.00 0.00 41.35 3.57
887 907 1.822186 GTGCAAACCACTCCCACGT 60.822 57.895 0.00 0.00 41.35 4.49
888 908 2.892334 CGTGCAAACCACTCCCACG 61.892 63.158 0.00 0.00 42.42 4.94
889 909 3.030652 CGTGCAAACCACTCCCAC 58.969 61.111 0.00 0.00 42.42 4.61
890 910 2.904866 GCGTGCAAACCACTCCCA 60.905 61.111 0.00 0.00 42.42 4.37
891 911 3.670377 GGCGTGCAAACCACTCCC 61.670 66.667 1.37 0.00 42.31 4.30
892 912 4.025401 CGGCGTGCAAACCACTCC 62.025 66.667 0.00 0.00 44.19 3.85
893 913 4.025401 CCGGCGTGCAAACCACTC 62.025 66.667 6.01 0.00 42.42 3.51
914 934 1.228862 TGCTTTCCAAGGAAGCCCC 60.229 57.895 15.68 3.40 35.38 5.80
915 935 0.827507 TGTGCTTTCCAAGGAAGCCC 60.828 55.000 15.68 8.75 35.38 5.19
916 936 0.600057 CTGTGCTTTCCAAGGAAGCC 59.400 55.000 15.68 7.13 35.38 4.35
917 937 0.038801 GCTGTGCTTTCCAAGGAAGC 60.039 55.000 13.08 13.08 35.38 3.86
918 938 0.600057 GGCTGTGCTTTCCAAGGAAG 59.400 55.000 1.32 0.00 35.38 3.46
919 939 1.172180 CGGCTGTGCTTTCCAAGGAA 61.172 55.000 0.00 0.00 0.00 3.36
920 940 1.600636 CGGCTGTGCTTTCCAAGGA 60.601 57.895 0.00 0.00 0.00 3.36
1117 1142 1.519455 GACGAGGAAGATGGTGCCG 60.519 63.158 0.00 0.00 0.00 5.69
1171 1196 3.306780 GGTCTGACCAAATTCGAAGAGGA 60.307 47.826 21.70 0.00 38.42 3.71
1266 1291 0.032678 CGATCGGGTGATGGGAGAAG 59.967 60.000 7.38 0.00 34.09 2.85
1428 1456 4.143263 GCGAATCCAGCAAATTCACAAAAG 60.143 41.667 0.00 0.00 33.60 2.27
1542 1570 1.133025 AGAGAATCGGGCAAAAATGCG 59.867 47.619 0.00 0.00 42.67 4.73
1629 1657 7.282450 GGGTTCCTAAACTACAATGATGGTAAG 59.718 40.741 0.00 0.00 35.61 2.34
1686 1714 1.742761 ACTTTCGCCATCCATGACAG 58.257 50.000 0.00 0.00 0.00 3.51
1768 1796 4.153655 CCATGAGCTGATAAATGTGATCCG 59.846 45.833 0.00 0.00 0.00 4.18
1834 1862 2.285707 TCCCTCTACTACACTGTCCCT 58.714 52.381 0.00 0.00 0.00 4.20
1845 1873 7.953493 CCCTCTTAATCTCTTATTCCCTCTACT 59.047 40.741 0.00 0.00 0.00 2.57
1850 1878 5.072464 GTGCCCTCTTAATCTCTTATTCCCT 59.928 44.000 0.00 0.00 0.00 4.20
1878 1906 9.698309 CCCTGATATGTAACTCTTATACAACAG 57.302 37.037 0.00 0.00 36.88 3.16
3140 3237 0.250901 GTGGAAGCATGTCTGTGGGT 60.251 55.000 0.00 0.00 0.00 4.51
3160 3257 0.952497 CGCTGCTTGACACCATCTGT 60.952 55.000 0.00 0.00 34.96 3.41
3275 3385 0.041535 TAACCGTCCTAAGCAGGGGA 59.958 55.000 0.00 0.00 42.87 4.81
3276 3386 0.464452 CTAACCGTCCTAAGCAGGGG 59.536 60.000 0.00 0.00 42.87 4.79
3277 3387 0.464452 CCTAACCGTCCTAAGCAGGG 59.536 60.000 0.00 0.00 42.87 4.45
3477 3592 6.659242 CACCCTCTACCACAGACAAAATTTAT 59.341 38.462 0.00 0.00 0.00 1.40
3592 3707 0.975040 TCTCAAGCTCAGAGAGGGCC 60.975 60.000 13.21 0.00 37.22 5.80
5265 5380 7.239972 TGTGTTAAAAGTTTGAATTTGCAAGC 58.760 30.769 0.00 0.00 0.00 4.01
5392 5509 7.442969 CAGTAGATTACCACCAAAAAGTACACA 59.557 37.037 0.00 0.00 0.00 3.72
5393 5510 7.443272 ACAGTAGATTACCACCAAAAAGTACAC 59.557 37.037 0.00 0.00 0.00 2.90
5440 5557 6.647334 TTGAAAAGCATCAATAAGGTGTGA 57.353 33.333 0.00 0.00 34.50 3.58
5517 5667 1.609208 CACTCAGGAAACCAACCAGG 58.391 55.000 0.00 0.00 45.67 4.45
5565 5715 8.784043 AGTAATTAAGTGAAGAAAGCGAACAAT 58.216 29.630 0.00 0.00 0.00 2.71
5667 5821 6.254157 CCAAATCAGATTCGCCAATGTTAAAG 59.746 38.462 0.00 0.00 0.00 1.85
5668 5822 6.098679 CCAAATCAGATTCGCCAATGTTAAA 58.901 36.000 0.00 0.00 0.00 1.52
5669 5823 5.184864 ACCAAATCAGATTCGCCAATGTTAA 59.815 36.000 0.00 0.00 0.00 2.01
5670 5824 4.704540 ACCAAATCAGATTCGCCAATGTTA 59.295 37.500 0.00 0.00 0.00 2.41
5685 5839 3.855255 TCAGGTCTGAACACCAAATCA 57.145 42.857 0.00 0.00 39.16 2.57
5749 5905 4.993705 TTCCTCACCAGTAAAGGTCATT 57.006 40.909 0.00 0.00 40.77 2.57
5883 6039 6.034591 CCAGGTACTAAAGAATCAGTACACG 58.965 44.000 12.47 4.32 45.85 4.49
6137 6293 4.761235 AGCAAAACACATGTCAGAGATG 57.239 40.909 6.00 6.00 0.00 2.90
6172 6328 6.267817 CAGTAATGCAAATACAGATGGTTGG 58.732 40.000 13.57 0.00 0.00 3.77
6194 6350 6.486253 TTACATTTCAGAAGCTTACAGCAG 57.514 37.500 0.00 0.00 45.56 4.24
6293 6449 9.611284 GCTCGCATGTCATGATTTATTTATTTA 57.389 29.630 17.24 0.00 0.00 1.40
6368 6524 6.758886 ACATCCATTTCAGAGACGAGTAATTC 59.241 38.462 0.00 0.00 0.00 2.17
6369 6525 6.644347 ACATCCATTTCAGAGACGAGTAATT 58.356 36.000 0.00 0.00 0.00 1.40
6370 6526 6.227298 ACATCCATTTCAGAGACGAGTAAT 57.773 37.500 0.00 0.00 0.00 1.89
6371 6527 5.661056 ACATCCATTTCAGAGACGAGTAA 57.339 39.130 0.00 0.00 0.00 2.24
6372 6528 6.773200 AGATACATCCATTTCAGAGACGAGTA 59.227 38.462 0.00 0.00 0.00 2.59
6373 6529 5.596361 AGATACATCCATTTCAGAGACGAGT 59.404 40.000 0.00 0.00 0.00 4.18
6374 6530 6.083098 AGATACATCCATTTCAGAGACGAG 57.917 41.667 0.00 0.00 0.00 4.18
6375 6531 6.998673 TCTAGATACATCCATTTCAGAGACGA 59.001 38.462 0.00 0.00 0.00 4.20
6376 6532 7.208225 TCTAGATACATCCATTTCAGAGACG 57.792 40.000 0.00 0.00 0.00 4.18
6377 6533 8.637986 AGTTCTAGATACATCCATTTCAGAGAC 58.362 37.037 0.00 0.00 0.00 3.36
6378 6534 8.774546 AGTTCTAGATACATCCATTTCAGAGA 57.225 34.615 0.00 0.00 0.00 3.10
6399 6555 9.817809 TGGATGTGTCTAGATGTATTTTAGTTC 57.182 33.333 0.00 0.00 0.00 3.01
6403 6559 9.908152 CGTATGGATGTGTCTAGATGTATTTTA 57.092 33.333 0.00 0.00 0.00 1.52
6404 6560 8.421784 ACGTATGGATGTGTCTAGATGTATTTT 58.578 33.333 0.00 0.00 26.40 1.82
6405 6561 7.867909 CACGTATGGATGTGTCTAGATGTATTT 59.132 37.037 0.00 0.00 37.74 1.40
6406 6562 7.371159 CACGTATGGATGTGTCTAGATGTATT 58.629 38.462 0.00 0.00 37.74 1.89
6407 6563 6.570571 GCACGTATGGATGTGTCTAGATGTAT 60.571 42.308 0.00 0.00 43.46 2.29
6408 6564 5.278315 GCACGTATGGATGTGTCTAGATGTA 60.278 44.000 0.00 0.00 43.46 2.29
6409 6565 4.499865 GCACGTATGGATGTGTCTAGATGT 60.500 45.833 0.00 0.00 43.46 3.06
6410 6566 3.983988 GCACGTATGGATGTGTCTAGATG 59.016 47.826 0.00 0.00 43.46 2.90
6411 6567 3.304726 CGCACGTATGGATGTGTCTAGAT 60.305 47.826 0.00 0.00 43.46 1.98
6412 6568 2.032924 CGCACGTATGGATGTGTCTAGA 59.967 50.000 0.00 0.00 43.46 2.43
6413 6569 2.032924 TCGCACGTATGGATGTGTCTAG 59.967 50.000 0.00 0.00 43.46 2.43
6414 6570 2.018515 TCGCACGTATGGATGTGTCTA 58.981 47.619 0.00 0.00 43.46 2.59
6415 6571 0.815095 TCGCACGTATGGATGTGTCT 59.185 50.000 0.00 0.00 43.46 3.41
6416 6572 0.921347 GTCGCACGTATGGATGTGTC 59.079 55.000 0.00 0.00 43.46 3.67
6417 6573 0.245266 TGTCGCACGTATGGATGTGT 59.755 50.000 0.00 0.00 43.46 3.72
6418 6574 1.324435 CTTGTCGCACGTATGGATGTG 59.676 52.381 0.00 0.00 44.24 3.21
6419 6575 1.067142 ACTTGTCGCACGTATGGATGT 60.067 47.619 0.00 0.00 0.00 3.06
6420 6576 1.640428 ACTTGTCGCACGTATGGATG 58.360 50.000 0.00 0.00 0.00 3.51
6421 6577 3.513680 TTACTTGTCGCACGTATGGAT 57.486 42.857 0.00 0.00 0.00 3.41
6422 6578 3.513680 ATTACTTGTCGCACGTATGGA 57.486 42.857 0.00 0.00 0.00 3.41
6423 6579 3.301579 CGAATTACTTGTCGCACGTATGG 60.302 47.826 0.00 0.00 0.00 2.74
6424 6580 3.301579 CCGAATTACTTGTCGCACGTATG 60.302 47.826 0.00 0.00 35.93 2.39
6425 6581 2.855963 CCGAATTACTTGTCGCACGTAT 59.144 45.455 0.00 0.00 35.93 3.06
6426 6582 2.095314 TCCGAATTACTTGTCGCACGTA 60.095 45.455 0.00 0.00 35.93 3.57
6427 6583 1.065358 CCGAATTACTTGTCGCACGT 58.935 50.000 0.00 0.00 35.93 4.49
6428 6584 1.342555 TCCGAATTACTTGTCGCACG 58.657 50.000 0.00 0.00 35.93 5.34
6429 6585 2.471749 CGTTCCGAATTACTTGTCGCAC 60.472 50.000 0.00 0.00 35.93 5.34
6430 6586 1.722464 CGTTCCGAATTACTTGTCGCA 59.278 47.619 0.00 0.00 35.93 5.10
6431 6587 1.060122 CCGTTCCGAATTACTTGTCGC 59.940 52.381 0.00 0.00 35.93 5.19
6432 6588 2.597305 CTCCGTTCCGAATTACTTGTCG 59.403 50.000 0.00 0.00 37.01 4.35
6433 6589 2.928116 CCTCCGTTCCGAATTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
6434 6590 2.354403 CCCTCCGTTCCGAATTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
6435 6591 2.093869 TCCCTCCGTTCCGAATTACTTG 60.094 50.000 0.00 0.00 0.00 3.16
6436 6592 2.167900 CTCCCTCCGTTCCGAATTACTT 59.832 50.000 0.00 0.00 0.00 2.24
6437 6593 1.755380 CTCCCTCCGTTCCGAATTACT 59.245 52.381 0.00 0.00 0.00 2.24
6438 6594 1.479730 ACTCCCTCCGTTCCGAATTAC 59.520 52.381 0.00 0.00 0.00 1.89
6439 6595 1.856629 ACTCCCTCCGTTCCGAATTA 58.143 50.000 0.00 0.00 0.00 1.40
6440 6596 1.755380 CTACTCCCTCCGTTCCGAATT 59.245 52.381 0.00 0.00 0.00 2.17
6441 6597 1.400737 CTACTCCCTCCGTTCCGAAT 58.599 55.000 0.00 0.00 0.00 3.34
6442 6598 0.682209 CCTACTCCCTCCGTTCCGAA 60.682 60.000 0.00 0.00 0.00 4.30
6443 6599 1.077212 CCTACTCCCTCCGTTCCGA 60.077 63.158 0.00 0.00 0.00 4.55
6444 6600 1.077212 TCCTACTCCCTCCGTTCCG 60.077 63.158 0.00 0.00 0.00 4.30
6445 6601 1.393487 GCTCCTACTCCCTCCGTTCC 61.393 65.000 0.00 0.00 0.00 3.62
6446 6602 0.396001 AGCTCCTACTCCCTCCGTTC 60.396 60.000 0.00 0.00 0.00 3.95
6447 6603 0.924823 TAGCTCCTACTCCCTCCGTT 59.075 55.000 0.00 0.00 0.00 4.44
6448 6604 0.924823 TTAGCTCCTACTCCCTCCGT 59.075 55.000 0.00 0.00 0.00 4.69
6449 6605 1.682323 GTTTAGCTCCTACTCCCTCCG 59.318 57.143 0.00 0.00 0.00 4.63
6450 6606 2.696187 CAGTTTAGCTCCTACTCCCTCC 59.304 54.545 0.00 0.00 0.00 4.30
6451 6607 3.367321 ACAGTTTAGCTCCTACTCCCTC 58.633 50.000 0.00 0.00 0.00 4.30
6452 6608 3.476485 ACAGTTTAGCTCCTACTCCCT 57.524 47.619 0.00 0.00 0.00 4.20
6453 6609 3.261137 ACAACAGTTTAGCTCCTACTCCC 59.739 47.826 0.00 0.00 0.00 4.30
6454 6610 4.246458 CACAACAGTTTAGCTCCTACTCC 58.754 47.826 0.00 0.00 0.00 3.85
6455 6611 3.680458 GCACAACAGTTTAGCTCCTACTC 59.320 47.826 0.00 0.00 0.00 2.59
6456 6612 3.325135 AGCACAACAGTTTAGCTCCTACT 59.675 43.478 0.00 0.00 0.00 2.57
6457 6613 3.665190 AGCACAACAGTTTAGCTCCTAC 58.335 45.455 0.00 0.00 0.00 3.18
6459 6615 2.938956 AGCACAACAGTTTAGCTCCT 57.061 45.000 0.00 0.00 0.00 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.