Multiple sequence alignment - TraesCS4D01G122700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G122700 chr4D 100.000 5317 0 0 1 5317 106685848 106680532 0.000000e+00 9819.0
1 TraesCS4D01G122700 chr4D 80.284 563 75 20 179 714 85255566 85256119 4.990000e-105 392.0
2 TraesCS4D01G122700 chr4D 79.820 555 80 17 179 707 223684250 223683702 5.030000e-100 375.0
3 TraesCS4D01G122700 chr4D 91.975 162 11 2 3636 3795 21147893 21147732 5.360000e-55 226.0
4 TraesCS4D01G122700 chr4D 89.941 169 16 1 17 184 419826944 419826776 3.220000e-52 217.0
5 TraesCS4D01G122700 chr4D 90.244 164 16 0 23 186 194610062 194609899 1.160000e-51 215.0
6 TraesCS4D01G122700 chr4D 90.123 162 16 0 23 184 245597611 245597772 1.500000e-50 211.0
7 TraesCS4D01G122700 chr4D 88.272 162 19 0 23 184 453490985 453491146 1.510000e-45 195.0
8 TraesCS4D01G122700 chr4D 87.179 156 19 1 29 183 25996335 25996180 5.470000e-40 176.0
9 TraesCS4D01G122700 chr4D 86.335 161 22 0 23 183 192421346 192421186 5.470000e-40 176.0
10 TraesCS4D01G122700 chr4D 87.692 130 15 1 589 718 68443436 68443564 3.320000e-32 150.0
11 TraesCS4D01G122700 chr4A 97.032 1954 41 9 1525 3474 469240921 469242861 0.000000e+00 3271.0
12 TraesCS4D01G122700 chr4A 94.014 568 23 4 916 1481 469240367 469240925 0.000000e+00 850.0
13 TraesCS4D01G122700 chr4A 96.009 451 17 1 4868 5317 469244137 469244587 0.000000e+00 732.0
14 TraesCS4D01G122700 chr4A 96.503 429 9 2 4051 4473 469243433 469243861 0.000000e+00 704.0
15 TraesCS4D01G122700 chr4A 90.141 355 30 5 180 532 469121117 469121468 1.750000e-124 457.0
16 TraesCS4D01G122700 chr4A 97.788 226 4 1 3828 4052 469243132 469243357 6.460000e-104 388.0
17 TraesCS4D01G122700 chr4A 94.872 234 12 0 3594 3827 469242856 469243089 3.030000e-97 366.0
18 TraesCS4D01G122700 chr4A 90.000 290 20 2 4519 4808 469243856 469244136 3.030000e-97 366.0
19 TraesCS4D01G122700 chr4A 92.121 165 11 1 3633 3795 450788436 450788272 1.150000e-56 231.0
20 TraesCS4D01G122700 chr4A 90.323 155 15 0 23 177 58672900 58673054 2.510000e-48 204.0
21 TraesCS4D01G122700 chr4A 93.069 101 4 3 821 920 469239276 469239374 1.540000e-30 145.0
22 TraesCS4D01G122700 chr4A 98.387 62 1 0 717 778 469238605 469238666 5.630000e-20 110.0
23 TraesCS4D01G122700 chr4A 90.196 51 5 0 5225 5275 469244591 469244641 3.440000e-07 67.6
24 TraesCS4D01G122700 chr4B 94.958 1904 86 7 1570 3472 169927816 169929710 0.000000e+00 2976.0
25 TraesCS4D01G122700 chr4B 93.981 1030 46 4 4201 5228 169930511 169931526 0.000000e+00 1544.0
26 TraesCS4D01G122700 chr4B 96.753 308 8 2 3828 4134 169929831 169930137 3.670000e-141 512.0
27 TraesCS4D01G122700 chr4B 83.096 562 57 16 179 714 169813349 169813898 1.340000e-130 477.0
28 TraesCS4D01G122700 chr4B 96.565 262 8 1 985 1246 169914436 169914696 2.940000e-117 433.0
29 TraesCS4D01G122700 chr4B 94.886 176 3 3 819 989 169913538 169913712 2.440000e-68 270.0
30 TraesCS4D01G122700 chr4B 81.548 336 27 18 1242 1573 169921735 169922039 1.480000e-60 244.0
31 TraesCS4D01G122700 chr4B 94.521 146 6 2 3469 3613 163458674 163458818 1.930000e-54 224.0
32 TraesCS4D01G122700 chr4B 96.154 78 2 1 5240 5317 169931648 169931724 5.590000e-25 126.0
33 TraesCS4D01G122700 chr4B 94.118 51 3 0 5225 5275 169931728 169931778 1.590000e-10 78.7
34 TraesCS4D01G122700 chr7D 84.133 542 73 9 179 713 363035914 363036449 3.670000e-141 512.0
35 TraesCS4D01G122700 chr7D 92.500 160 12 0 3636 3795 201885616 201885457 4.140000e-56 230.0
36 TraesCS4D01G122700 chr7D 97.727 132 3 0 3466 3597 251035919 251036050 1.490000e-55 228.0
37 TraesCS4D01G122700 chr7D 87.117 163 16 5 23 183 536783604 536783445 4.230000e-41 180.0
38 TraesCS4D01G122700 chr7D 85.616 146 16 4 566 708 179605132 179605275 1.190000e-31 148.0
39 TraesCS4D01G122700 chr5B 77.065 920 151 42 2512 3409 267754696 267755577 4.820000e-130 475.0
40 TraesCS4D01G122700 chr5B 81.262 539 82 15 179 708 424528327 424528855 8.240000e-113 418.0
41 TraesCS4D01G122700 chr5B 82.705 451 66 8 184 627 424552287 424552732 1.800000e-104 390.0
42 TraesCS4D01G122700 chr5B 93.197 147 10 0 37 183 197437447 197437593 3.220000e-52 217.0
43 TraesCS4D01G122700 chr5D 78.912 735 122 18 2684 3409 238118834 238118124 8.060000e-128 468.0
44 TraesCS4D01G122700 chr5D 80.769 364 60 10 187 546 306704063 306703706 5.250000e-70 276.0
45 TraesCS4D01G122700 chr5D 80.114 352 58 10 180 526 385690952 385690608 8.840000e-63 252.0
46 TraesCS4D01G122700 chr5D 99.242 132 1 0 3467 3598 27047825 27047956 6.880000e-59 239.0
47 TraesCS4D01G122700 chr5D 91.566 166 12 1 3632 3795 150835564 150835729 1.490000e-55 228.0
48 TraesCS4D01G122700 chr5D 89.441 161 17 0 23 183 362653637 362653797 2.510000e-48 204.0
49 TraesCS4D01G122700 chr5D 81.699 153 23 4 566 717 130228789 130228937 7.230000e-24 122.0
50 TraesCS4D01G122700 chr5D 83.333 90 13 2 629 717 264791972 264791884 1.230000e-11 82.4
51 TraesCS4D01G122700 chr5D 90.909 55 4 1 644 697 488768352 488768406 7.390000e-09 73.1
52 TraesCS4D01G122700 chr6B 82.528 538 81 11 186 717 225332880 225332350 1.350000e-125 460.0
53 TraesCS4D01G122700 chr6B 81.970 538 81 13 186 717 225325007 225324480 4.890000e-120 442.0
54 TraesCS4D01G122700 chr6B 90.062 161 16 0 23 183 210836196 210836036 5.400000e-50 209.0
55 TraesCS4D01G122700 chr6B 84.810 158 21 3 556 711 536017262 536017418 7.130000e-34 156.0
56 TraesCS4D01G122700 chr6D 83.433 501 72 9 184 677 416450613 416450117 6.280000e-124 455.0
57 TraesCS4D01G122700 chr6D 80.961 541 80 17 184 717 415443931 415443407 1.780000e-109 407.0
58 TraesCS4D01G122700 chr6D 80.783 562 64 18 179 715 309707380 309707922 2.980000e-107 399.0
59 TraesCS4D01G122700 chr6D 79.588 534 80 20 184 710 470852483 470851972 6.550000e-94 355.0
60 TraesCS4D01G122700 chr6D 82.042 284 38 8 179 452 166756794 166756514 4.140000e-56 230.0
61 TraesCS4D01G122700 chr6D 90.476 168 14 2 17 183 345596607 345596441 2.490000e-53 220.0
62 TraesCS4D01G122700 chr6D 90.683 161 14 1 23 183 182376512 182376353 4.170000e-51 213.0
63 TraesCS4D01G122700 chr6D 92.086 139 11 0 23 161 17050771 17050909 4.200000e-46 196.0
64 TraesCS4D01G122700 chr6D 86.585 164 19 3 198 358 298359171 298359008 1.520000e-40 178.0
65 TraesCS4D01G122700 chr6D 77.170 311 63 8 413 718 149819598 149819291 1.970000e-39 174.0
66 TraesCS4D01G122700 chr6D 89.286 56 3 3 290 342 131436512 131436457 3.440000e-07 67.6
67 TraesCS4D01G122700 chr6D 84.507 71 4 1 101 164 158144467 158144537 4.450000e-06 63.9
68 TraesCS4D01G122700 chr6D 83.117 77 5 6 272 342 312393607 312393681 4.450000e-06 63.9
69 TraesCS4D01G122700 chr6D 100.000 30 0 0 27 56 367994875 367994904 7.440000e-04 56.5
70 TraesCS4D01G122700 chr6D 100.000 29 0 0 119 147 226286525 226286553 3.000000e-03 54.7
71 TraesCS4D01G122700 chr3D 81.919 542 83 9 179 713 314378905 314378372 1.360000e-120 444.0
72 TraesCS4D01G122700 chr3D 81.949 554 62 22 181 708 110389633 110390174 8.180000e-118 435.0
73 TraesCS4D01G122700 chr3D 80.851 564 73 20 179 718 309104971 309104419 1.380000e-110 411.0
74 TraesCS4D01G122700 chr3D 79.715 562 77 20 179 713 596000124 596000675 6.500000e-99 372.0
75 TraesCS4D01G122700 chr3D 90.683 161 15 0 23 183 205594939 205594779 1.160000e-51 215.0
76 TraesCS4D01G122700 chr3D 87.273 165 20 1 23 187 2157905 2158068 2.530000e-43 187.0
77 TraesCS4D01G122700 chr5A 76.413 920 158 39 2512 3410 317233013 317233894 4.890000e-120 442.0
78 TraesCS4D01G122700 chr5A 73.433 335 70 15 1980 2305 317232423 317232747 2.020000e-19 108.0
79 TraesCS4D01G122700 chr6A 86.089 381 49 4 179 555 446504682 446505062 1.780000e-109 407.0
80 TraesCS4D01G122700 chr6A 79.273 550 77 22 184 708 317662773 317662236 3.050000e-92 350.0
81 TraesCS4D01G122700 chr6A 90.533 169 14 2 3633 3800 504487065 504487232 6.930000e-54 222.0
82 TraesCS4D01G122700 chr6A 88.889 162 17 1 23 184 7246942 7247102 1.170000e-46 198.0
83 TraesCS4D01G122700 chr1D 78.648 562 90 14 179 718 202186981 202187534 3.940000e-91 346.0
84 TraesCS4D01G122700 chr1D 79.666 359 45 17 179 528 287490932 287491271 3.200000e-57 233.0
85 TraesCS4D01G122700 chr1D 82.479 234 31 7 179 409 371196574 371196348 4.200000e-46 196.0
86 TraesCS4D01G122700 chr1D 84.049 163 25 1 25 187 77320928 77320767 7.130000e-34 156.0
87 TraesCS4D01G122700 chr1D 85.185 135 18 2 413 546 4023578 4023445 2.580000e-28 137.0
88 TraesCS4D01G122700 chr1D 75.375 333 50 13 403 711 129578215 129578539 1.200000e-26 132.0
89 TraesCS4D01G122700 chr1D 87.850 107 13 0 78 184 5657354 5657248 5.590000e-25 126.0
90 TraesCS4D01G122700 chr1D 75.714 210 44 6 342 546 283944315 283944522 1.220000e-16 99.0
91 TraesCS4D01G122700 chr1D 92.308 65 3 2 101 165 87742103 87742041 2.040000e-14 91.6
92 TraesCS4D01G122700 chr1D 92.982 57 4 0 78 134 50528389 50528445 3.410000e-12 84.2
93 TraesCS4D01G122700 chr1D 97.059 34 1 0 23 56 218287669 218287636 2.070000e-04 58.4
94 TraesCS4D01G122700 chr1D 97.059 34 1 0 23 56 335275994 335275961 2.070000e-04 58.4
95 TraesCS4D01G122700 chr1B 83.690 374 54 6 179 549 440249990 440250359 3.940000e-91 346.0
96 TraesCS4D01G122700 chr1B 97.059 136 4 0 3470 3605 623732112 623731977 4.140000e-56 230.0
97 TraesCS4D01G122700 chr1B 88.485 165 17 2 23 187 604848208 604848046 1.170000e-46 198.0
98 TraesCS4D01G122700 chr7A 86.025 322 42 3 237 556 394877069 394876749 5.100000e-90 342.0
99 TraesCS4D01G122700 chr7A 93.333 150 9 1 3467 3615 173720288 173720139 2.490000e-53 220.0
100 TraesCS4D01G122700 chr3B 97.080 137 4 0 3468 3604 236362076 236361940 1.150000e-56 231.0
101 TraesCS4D01G122700 chr2A 92.593 162 10 1 3636 3795 249754620 249754459 1.150000e-56 231.0
102 TraesCS4D01G122700 chr3A 97.059 136 4 0 3469 3604 580812683 580812818 4.140000e-56 230.0
103 TraesCS4D01G122700 chr1A 96.403 139 5 0 3469 3607 516009729 516009591 4.140000e-56 230.0
104 TraesCS4D01G122700 chr2D 91.975 162 11 1 3636 3795 250630887 250630726 5.360000e-55 226.0
105 TraesCS4D01G122700 chr2D 88.235 187 17 4 3616 3799 617215167 617215351 8.970000e-53 219.0
106 TraesCS4D01G122700 chr2D 78.502 307 51 14 420 718 290815936 290815637 2.530000e-43 187.0
107 TraesCS4D01G122700 chr2D 78.502 307 51 14 420 718 290895844 290895545 2.530000e-43 187.0
108 TraesCS4D01G122700 chr2D 80.625 160 28 3 561 717 21915985 21915826 2.600000e-23 121.0
109 TraesCS4D01G122700 chr7B 92.308 156 10 2 3453 3607 295083311 295083157 2.490000e-53 220.0
110 TraesCS4D01G122700 chr7B 89.091 165 16 2 23 186 497157598 497157435 2.510000e-48 204.0
111 TraesCS4D01G122700 chrUn 89.041 146 16 0 39 184 98679387 98679532 1.180000e-41 182.0
112 TraesCS4D01G122700 chrUn 89.764 127 12 1 179 304 294211397 294211271 1.530000e-35 161.0
113 TraesCS4D01G122700 chrUn 89.764 127 12 1 179 304 294237886 294237760 1.530000e-35 161.0
114 TraesCS4D01G122700 chrUn 90.323 124 11 1 179 301 320032320 320032443 1.530000e-35 161.0
115 TraesCS4D01G122700 chrUn 83.929 168 26 1 17 183 96714430 96714597 5.510000e-35 159.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G122700 chr4D 106680532 106685848 5316 True 9819.00 9819 100.0000 1 5317 1 chr4D.!!$R3 5316
1 TraesCS4D01G122700 chr4D 85255566 85256119 553 False 392.00 392 80.2840 179 714 1 chr4D.!!$F2 535
2 TraesCS4D01G122700 chr4D 223683702 223684250 548 True 375.00 375 79.8200 179 707 1 chr4D.!!$R6 528
3 TraesCS4D01G122700 chr4A 469238605 469244641 6036 False 699.96 3271 94.7870 717 5317 10 chr4A.!!$F3 4600
4 TraesCS4D01G122700 chr4B 169927816 169931778 3962 False 1047.34 2976 95.1928 1570 5317 5 chr4B.!!$F5 3747
5 TraesCS4D01G122700 chr4B 169813349 169813898 549 False 477.00 477 83.0960 179 714 1 chr4B.!!$F2 535
6 TraesCS4D01G122700 chr4B 169913538 169914696 1158 False 351.50 433 95.7255 819 1246 2 chr4B.!!$F4 427
7 TraesCS4D01G122700 chr7D 363035914 363036449 535 False 512.00 512 84.1330 179 713 1 chr7D.!!$F3 534
8 TraesCS4D01G122700 chr5B 267754696 267755577 881 False 475.00 475 77.0650 2512 3409 1 chr5B.!!$F2 897
9 TraesCS4D01G122700 chr5B 424528327 424528855 528 False 418.00 418 81.2620 179 708 1 chr5B.!!$F3 529
10 TraesCS4D01G122700 chr5D 238118124 238118834 710 True 468.00 468 78.9120 2684 3409 1 chr5D.!!$R1 725
11 TraesCS4D01G122700 chr6B 225332350 225332880 530 True 460.00 460 82.5280 186 717 1 chr6B.!!$R3 531
12 TraesCS4D01G122700 chr6B 225324480 225325007 527 True 442.00 442 81.9700 186 717 1 chr6B.!!$R2 531
13 TraesCS4D01G122700 chr6D 415443407 415443931 524 True 407.00 407 80.9610 184 717 1 chr6D.!!$R7 533
14 TraesCS4D01G122700 chr6D 309707380 309707922 542 False 399.00 399 80.7830 179 715 1 chr6D.!!$F4 536
15 TraesCS4D01G122700 chr6D 470851972 470852483 511 True 355.00 355 79.5880 184 710 1 chr6D.!!$R9 526
16 TraesCS4D01G122700 chr3D 314378372 314378905 533 True 444.00 444 81.9190 179 713 1 chr3D.!!$R3 534
17 TraesCS4D01G122700 chr3D 110389633 110390174 541 False 435.00 435 81.9490 181 708 1 chr3D.!!$F2 527
18 TraesCS4D01G122700 chr3D 309104419 309104971 552 True 411.00 411 80.8510 179 718 1 chr3D.!!$R2 539
19 TraesCS4D01G122700 chr3D 596000124 596000675 551 False 372.00 372 79.7150 179 713 1 chr3D.!!$F3 534
20 TraesCS4D01G122700 chr5A 317232423 317233894 1471 False 275.00 442 74.9230 1980 3410 2 chr5A.!!$F1 1430
21 TraesCS4D01G122700 chr6A 317662236 317662773 537 True 350.00 350 79.2730 184 708 1 chr6A.!!$R1 524
22 TraesCS4D01G122700 chr1D 202186981 202187534 553 False 346.00 346 78.6480 179 718 1 chr1D.!!$F3 539

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
169 170 0.041535 TGGCTGATGGCAAATTCCCT 59.958 50.000 0.00 0.00 46.03 4.20 F
751 832 0.106149 ACCTTCACACGTCCTCCAAC 59.894 55.000 0.00 0.00 0.00 3.77 F
1785 4168 0.108138 AACCATCTGTGACCGCTAGC 60.108 55.000 4.06 4.06 0.00 3.42 F
2001 4391 2.370519 TCCAAATTCAGTTCCCACGAGA 59.629 45.455 0.00 0.00 0.00 4.04 F
3595 6062 1.004394 GAATTTTGGGACGGAGGGAGT 59.996 52.381 0.00 0.00 0.00 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1494 3873 0.179089 GATCACCTCACAGCGATGCT 60.179 55.0 0.0 0.0 40.77 3.79 R
2031 4421 0.605319 TTTGCTAGACTTGCCGGTGG 60.605 55.0 1.9 0.0 0.00 4.61 R
3579 6046 0.115745 ACTACTCCCTCCGTCCCAAA 59.884 55.0 0.0 0.0 0.00 3.28 R
3789 6259 0.324943 AGGCCGCAACAACATACTCT 59.675 50.0 0.0 0.0 0.00 3.24 R
4795 7704 0.244450 ATTTGCATCCAACGGCACTG 59.756 50.0 0.0 0.0 40.23 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.453054 TCCACTAGACCCCACCCC 59.547 66.667 0.00 0.00 0.00 4.95
18 19 2.124085 CCACTAGACCCCACCCCA 59.876 66.667 0.00 0.00 0.00 4.96
19 20 1.995626 CCACTAGACCCCACCCCAG 60.996 68.421 0.00 0.00 0.00 4.45
20 21 2.285442 ACTAGACCCCACCCCAGC 60.285 66.667 0.00 0.00 0.00 4.85
21 22 2.041265 CTAGACCCCACCCCAGCT 59.959 66.667 0.00 0.00 0.00 4.24
22 23 2.040606 TAGACCCCACCCCAGCTC 59.959 66.667 0.00 0.00 0.00 4.09
23 24 2.537714 CTAGACCCCACCCCAGCTCT 62.538 65.000 0.00 0.00 0.00 4.09
24 25 1.226104 TAGACCCCACCCCAGCTCTA 61.226 60.000 0.00 0.00 0.00 2.43
25 26 2.041265 ACCCCACCCCAGCTCTAG 59.959 66.667 0.00 0.00 0.00 2.43
26 27 3.483869 CCCCACCCCAGCTCTAGC 61.484 72.222 0.00 0.00 42.49 3.42
27 28 2.688666 CCCACCCCAGCTCTAGCA 60.689 66.667 4.54 0.00 45.16 3.49
28 29 2.739996 CCCACCCCAGCTCTAGCAG 61.740 68.421 4.54 0.00 45.16 4.24
29 30 1.687146 CCACCCCAGCTCTAGCAGA 60.687 63.158 4.54 0.00 45.16 4.26
30 31 1.519719 CACCCCAGCTCTAGCAGAC 59.480 63.158 4.54 0.00 45.16 3.51
31 32 2.055042 ACCCCAGCTCTAGCAGACG 61.055 63.158 4.54 0.00 45.16 4.18
32 33 2.790791 CCCCAGCTCTAGCAGACGG 61.791 68.421 4.54 0.00 45.16 4.79
33 34 2.105930 CCAGCTCTAGCAGACGGC 59.894 66.667 4.54 0.00 45.16 5.68
43 44 2.616969 GCAGACGGCAAAGAACTGA 58.383 52.632 0.00 0.00 43.97 3.41
44 45 0.235926 GCAGACGGCAAAGAACTGAC 59.764 55.000 0.00 0.00 43.97 3.51
45 46 1.871080 CAGACGGCAAAGAACTGACT 58.129 50.000 0.00 0.00 0.00 3.41
46 47 1.528586 CAGACGGCAAAGAACTGACTG 59.471 52.381 0.00 0.00 31.67 3.51
47 48 1.412710 AGACGGCAAAGAACTGACTGA 59.587 47.619 0.00 0.00 0.00 3.41
48 49 2.037772 AGACGGCAAAGAACTGACTGAT 59.962 45.455 0.00 0.00 0.00 2.90
49 50 2.146342 ACGGCAAAGAACTGACTGATG 58.854 47.619 0.00 0.00 0.00 3.07
50 51 1.466167 CGGCAAAGAACTGACTGATGG 59.534 52.381 0.00 0.00 0.00 3.51
51 52 1.200948 GGCAAAGAACTGACTGATGGC 59.799 52.381 0.00 0.00 0.00 4.40
52 53 1.881973 GCAAAGAACTGACTGATGGCA 59.118 47.619 0.00 0.00 0.00 4.92
53 54 2.294233 GCAAAGAACTGACTGATGGCAA 59.706 45.455 0.00 0.00 0.00 4.52
54 55 3.243501 GCAAAGAACTGACTGATGGCAAA 60.244 43.478 0.00 0.00 0.00 3.68
55 56 4.560108 GCAAAGAACTGACTGATGGCAAAT 60.560 41.667 0.00 0.00 0.00 2.32
56 57 5.335897 GCAAAGAACTGACTGATGGCAAATA 60.336 40.000 0.00 0.00 0.00 1.40
57 58 6.320171 CAAAGAACTGACTGATGGCAAATAG 58.680 40.000 0.00 0.00 0.00 1.73
58 59 5.171339 AGAACTGACTGATGGCAAATAGT 57.829 39.130 0.00 0.00 0.00 2.12
59 60 6.299805 AGAACTGACTGATGGCAAATAGTA 57.700 37.500 0.00 0.00 0.00 1.82
60 61 6.893583 AGAACTGACTGATGGCAAATAGTAT 58.106 36.000 0.00 0.00 0.00 2.12
61 62 6.989169 AGAACTGACTGATGGCAAATAGTATC 59.011 38.462 0.00 0.00 0.00 2.24
62 63 6.491714 ACTGACTGATGGCAAATAGTATCT 57.508 37.500 0.00 0.00 0.00 1.98
63 64 6.893583 ACTGACTGATGGCAAATAGTATCTT 58.106 36.000 0.00 0.00 0.00 2.40
64 65 7.341805 ACTGACTGATGGCAAATAGTATCTTT 58.658 34.615 0.00 0.00 0.00 2.52
65 66 7.281774 ACTGACTGATGGCAAATAGTATCTTTG 59.718 37.037 0.00 0.00 36.81 2.77
74 75 5.766222 CAAATAGTATCTTTGCCATCAGCC 58.234 41.667 0.00 0.00 42.71 4.85
75 76 4.712051 ATAGTATCTTTGCCATCAGCCA 57.288 40.909 0.00 0.00 42.71 4.75
76 77 3.589951 AGTATCTTTGCCATCAGCCAT 57.410 42.857 0.00 0.00 42.71 4.40
77 78 3.907221 AGTATCTTTGCCATCAGCCATT 58.093 40.909 0.00 0.00 42.71 3.16
78 79 4.284178 AGTATCTTTGCCATCAGCCATTT 58.716 39.130 0.00 0.00 42.71 2.32
79 80 3.814005 ATCTTTGCCATCAGCCATTTC 57.186 42.857 0.00 0.00 42.71 2.17
80 81 2.811410 TCTTTGCCATCAGCCATTTCT 58.189 42.857 0.00 0.00 42.71 2.52
81 82 3.167485 TCTTTGCCATCAGCCATTTCTT 58.833 40.909 0.00 0.00 42.71 2.52
82 83 3.579586 TCTTTGCCATCAGCCATTTCTTT 59.420 39.130 0.00 0.00 42.71 2.52
83 84 3.322211 TTGCCATCAGCCATTTCTTTG 57.678 42.857 0.00 0.00 42.71 2.77
84 85 1.066716 TGCCATCAGCCATTTCTTTGC 60.067 47.619 0.00 0.00 42.71 3.68
85 86 1.741394 GCCATCAGCCATTTCTTTGCC 60.741 52.381 0.00 0.00 34.35 4.52
86 87 1.551430 CCATCAGCCATTTCTTTGCCA 59.449 47.619 0.00 0.00 0.00 4.92
87 88 2.169769 CCATCAGCCATTTCTTTGCCAT 59.830 45.455 0.00 0.00 0.00 4.40
88 89 3.454375 CATCAGCCATTTCTTTGCCATC 58.546 45.455 0.00 0.00 0.00 3.51
89 90 2.811410 TCAGCCATTTCTTTGCCATCT 58.189 42.857 0.00 0.00 0.00 2.90
90 91 2.494471 TCAGCCATTTCTTTGCCATCTG 59.506 45.455 0.00 0.00 0.00 2.90
91 92 2.232941 CAGCCATTTCTTTGCCATCTGT 59.767 45.455 0.00 0.00 0.00 3.41
92 93 2.901839 AGCCATTTCTTTGCCATCTGTT 59.098 40.909 0.00 0.00 0.00 3.16
93 94 3.325716 AGCCATTTCTTTGCCATCTGTTT 59.674 39.130 0.00 0.00 0.00 2.83
94 95 4.067192 GCCATTTCTTTGCCATCTGTTTT 58.933 39.130 0.00 0.00 0.00 2.43
95 96 4.516321 GCCATTTCTTTGCCATCTGTTTTT 59.484 37.500 0.00 0.00 0.00 1.94
119 120 3.683581 GCAGACGGCAAAGACATTC 57.316 52.632 0.00 0.00 43.97 2.67
120 121 1.160137 GCAGACGGCAAAGACATTCT 58.840 50.000 0.00 0.00 43.97 2.40
121 122 1.537202 GCAGACGGCAAAGACATTCTT 59.463 47.619 0.00 0.00 43.97 2.52
122 123 2.030805 GCAGACGGCAAAGACATTCTTT 60.031 45.455 0.00 0.00 46.75 2.52
130 131 3.904136 AAAGACATTCTTTGCCGTCAG 57.096 42.857 0.32 0.00 44.34 3.51
131 132 1.160137 AGACATTCTTTGCCGTCAGC 58.840 50.000 0.00 0.00 44.14 4.26
132 133 1.160137 GACATTCTTTGCCGTCAGCT 58.840 50.000 0.00 0.00 44.23 4.24
133 134 2.028112 AGACATTCTTTGCCGTCAGCTA 60.028 45.455 0.00 0.00 44.23 3.32
134 135 2.349886 GACATTCTTTGCCGTCAGCTAG 59.650 50.000 0.00 0.00 44.23 3.42
135 136 1.063174 CATTCTTTGCCGTCAGCTAGC 59.937 52.381 6.62 6.62 44.23 3.42
136 137 0.321671 TTCTTTGCCGTCAGCTAGCT 59.678 50.000 12.68 12.68 44.23 3.32
137 138 0.390340 TCTTTGCCGTCAGCTAGCTG 60.390 55.000 34.48 34.48 44.23 4.24
146 147 2.354109 TCAGCTAGCTGACGACAAAG 57.646 50.000 37.64 14.25 46.80 2.77
147 148 1.886542 TCAGCTAGCTGACGACAAAGA 59.113 47.619 37.64 16.91 46.80 2.52
148 149 2.296190 TCAGCTAGCTGACGACAAAGAA 59.704 45.455 37.64 16.20 46.80 2.52
149 150 2.410053 CAGCTAGCTGACGACAAAGAAC 59.590 50.000 36.47 0.00 46.30 3.01
150 151 2.297597 AGCTAGCTGACGACAAAGAACT 59.702 45.455 18.57 0.00 0.00 3.01
151 152 2.410053 GCTAGCTGACGACAAAGAACTG 59.590 50.000 7.70 0.00 0.00 3.16
152 153 1.871080 AGCTGACGACAAAGAACTGG 58.129 50.000 0.00 0.00 0.00 4.00
153 154 0.235926 GCTGACGACAAAGAACTGGC 59.764 55.000 0.00 0.00 0.00 4.85
154 155 1.871080 CTGACGACAAAGAACTGGCT 58.129 50.000 0.00 0.00 0.00 4.75
155 156 1.528586 CTGACGACAAAGAACTGGCTG 59.471 52.381 0.00 0.00 0.00 4.85
156 157 1.138069 TGACGACAAAGAACTGGCTGA 59.862 47.619 0.00 0.00 0.00 4.26
157 158 2.224281 TGACGACAAAGAACTGGCTGAT 60.224 45.455 0.00 0.00 0.00 2.90
158 159 2.146342 ACGACAAAGAACTGGCTGATG 58.854 47.619 0.00 0.00 0.00 3.07
159 160 1.466167 CGACAAAGAACTGGCTGATGG 59.534 52.381 0.00 0.00 0.00 3.51
160 161 1.200948 GACAAAGAACTGGCTGATGGC 59.799 52.381 0.00 0.00 40.90 4.40
161 162 1.250328 CAAAGAACTGGCTGATGGCA 58.750 50.000 0.00 0.00 46.87 4.92
168 169 2.594342 TGGCTGATGGCAAATTCCC 58.406 52.632 0.00 0.00 46.03 3.97
169 170 0.041535 TGGCTGATGGCAAATTCCCT 59.958 50.000 0.00 0.00 46.03 4.20
170 171 0.462789 GGCTGATGGCAAATTCCCTG 59.537 55.000 0.00 0.00 44.01 4.45
171 172 1.477553 GCTGATGGCAAATTCCCTGA 58.522 50.000 0.00 0.00 41.35 3.86
172 173 2.037144 GCTGATGGCAAATTCCCTGAT 58.963 47.619 0.00 0.00 41.35 2.90
173 174 2.433239 GCTGATGGCAAATTCCCTGATT 59.567 45.455 0.00 0.00 41.35 2.57
174 175 3.492137 GCTGATGGCAAATTCCCTGATTC 60.492 47.826 0.00 0.00 41.35 2.52
175 176 3.033184 TGATGGCAAATTCCCTGATTCC 58.967 45.455 0.00 0.00 0.00 3.01
176 177 2.619697 TGGCAAATTCCCTGATTCCA 57.380 45.000 0.00 0.00 0.00 3.53
177 178 2.459644 TGGCAAATTCCCTGATTCCAG 58.540 47.619 0.00 0.00 40.09 3.86
182 183 4.096984 GCAAATTCCCTGATTCCAGTAGTG 59.903 45.833 0.00 0.00 38.74 2.74
217 218 3.687125 TCGAGGATGAACTACTCACACT 58.313 45.455 0.00 0.00 36.69 3.55
219 220 4.523173 TCGAGGATGAACTACTCACACTTT 59.477 41.667 0.00 0.00 36.69 2.66
222 223 5.710984 AGGATGAACTACTCACACTTTACG 58.289 41.667 0.00 0.00 36.69 3.18
231 232 5.455056 ACTCACACTTTACGATGAGAACT 57.545 39.130 7.08 0.00 40.92 3.01
418 436 2.547855 GCAATTGTTTTCGGAGCCCTTT 60.548 45.455 7.40 0.00 0.00 3.11
472 490 3.643792 TCCGGTTGGGTTGAAATTTTGAT 59.356 39.130 0.00 0.00 37.00 2.57
538 556 2.536761 TCAACCGACTTACAAGGTGG 57.463 50.000 0.00 0.00 38.44 4.61
557 635 1.687612 CCACAAGACATCAGGGCCT 59.312 57.895 0.00 0.00 0.00 5.19
564 642 1.145738 AGACATCAGGGCCTTGTTGTT 59.854 47.619 26.80 16.39 32.65 2.83
573 651 1.555477 GCCTTGTTGTTTTGTGGACG 58.445 50.000 0.00 0.00 0.00 4.79
580 658 2.975799 TTTTGTGGACGCCTCGGC 60.976 61.111 0.00 0.00 37.85 5.54
599 677 1.434555 CCACCGTCTTGCGTTGATTA 58.565 50.000 0.00 0.00 34.82 1.75
751 832 0.106149 ACCTTCACACGTCCTCCAAC 59.894 55.000 0.00 0.00 0.00 3.77
784 865 4.525949 GTCGGGGCGAGGGCTAAC 62.526 72.222 0.00 0.00 36.23 2.34
787 868 4.176752 GGGGCGAGGGCTAACCAG 62.177 72.222 0.00 0.00 43.89 4.00
788 869 4.176752 GGGCGAGGGCTAACCAGG 62.177 72.222 0.00 0.00 43.89 4.45
789 870 4.176752 GGCGAGGGCTAACCAGGG 62.177 72.222 0.00 0.00 43.89 4.45
790 871 3.081409 GCGAGGGCTAACCAGGGA 61.081 66.667 0.00 0.00 43.89 4.20
791 872 3.095347 GCGAGGGCTAACCAGGGAG 62.095 68.421 0.00 0.00 43.89 4.30
795 876 0.914902 AGGGCTAACCAGGGAGAACC 60.915 60.000 0.00 0.00 43.89 3.62
812 893 6.292150 GGAGAACCTTATCCCATCTTACTTG 58.708 44.000 0.00 0.00 32.46 3.16
813 894 5.685728 AGAACCTTATCCCATCTTACTTGC 58.314 41.667 0.00 0.00 0.00 4.01
814 895 4.073293 ACCTTATCCCATCTTACTTGCG 57.927 45.455 0.00 0.00 0.00 4.85
815 896 3.181454 ACCTTATCCCATCTTACTTGCGG 60.181 47.826 0.00 0.00 0.00 5.69
817 898 4.263068 CCTTATCCCATCTTACTTGCGGAT 60.263 45.833 0.00 0.00 34.54 4.18
863 1511 6.780457 ATGGGTATCCAACTCAATCAAAAG 57.220 37.500 0.00 0.00 43.46 2.27
869 1519 9.710900 GGTATCCAACTCAATCAAAAGAAAAAT 57.289 29.630 0.00 0.00 0.00 1.82
980 2627 8.432805 CCTATTTGACCCACTAATCATCTAGTT 58.567 37.037 0.00 0.00 29.36 2.24
983 3360 4.341235 TGACCCACTAATCATCTAGTTCCG 59.659 45.833 0.00 0.00 29.36 4.30
1091 3468 1.830145 CGAATCCCCCGAACCTCAT 59.170 57.895 0.00 0.00 0.00 2.90
1294 3672 2.124570 GGCGGTCATGATGCTGGT 60.125 61.111 18.67 0.00 0.00 4.00
1375 3753 2.628178 CGCCTGAGAACTATGGGTATGA 59.372 50.000 0.00 0.00 0.00 2.15
1381 3759 7.102346 CCTGAGAACTATGGGTATGATTGATC 58.898 42.308 0.00 0.00 0.00 2.92
1383 3761 6.493458 TGAGAACTATGGGTATGATTGATCGA 59.507 38.462 0.00 0.00 0.00 3.59
1450 3829 2.125832 TCGATTTGTCGGCCGTCC 60.126 61.111 27.15 17.53 0.00 4.79
1452 3831 2.452813 CGATTTGTCGGCCGTCCTG 61.453 63.158 27.15 6.06 0.00 3.86
1454 3833 1.079127 ATTTGTCGGCCGTCCTGAG 60.079 57.895 27.15 0.00 0.00 3.35
1476 3855 0.810426 TTGCGCTTGGTTACACACGA 60.810 50.000 9.73 0.00 0.00 4.35
1477 3856 0.601576 TGCGCTTGGTTACACACGAT 60.602 50.000 9.73 0.00 0.00 3.73
1478 3857 0.515564 GCGCTTGGTTACACACGATT 59.484 50.000 0.00 0.00 0.00 3.34
1479 3858 1.727880 GCGCTTGGTTACACACGATTA 59.272 47.619 0.00 0.00 0.00 1.75
1480 3859 2.222729 GCGCTTGGTTACACACGATTAG 60.223 50.000 0.00 0.00 0.00 1.73
1481 3860 2.347452 CGCTTGGTTACACACGATTAGG 59.653 50.000 0.00 0.00 0.00 2.69
1482 3861 3.592059 GCTTGGTTACACACGATTAGGA 58.408 45.455 0.00 0.00 0.00 2.94
1483 3862 3.998341 GCTTGGTTACACACGATTAGGAA 59.002 43.478 0.00 0.00 0.00 3.36
1484 3863 4.142966 GCTTGGTTACACACGATTAGGAAC 60.143 45.833 0.00 0.00 0.00 3.62
1485 3864 3.929094 TGGTTACACACGATTAGGAACC 58.071 45.455 0.00 0.00 36.28 3.62
1486 3865 3.579586 TGGTTACACACGATTAGGAACCT 59.420 43.478 13.96 0.00 36.61 3.50
1487 3866 3.930848 GGTTACACACGATTAGGAACCTG 59.069 47.826 3.36 0.00 33.58 4.00
1488 3867 4.562143 GGTTACACACGATTAGGAACCTGT 60.562 45.833 3.36 0.00 33.58 4.00
1489 3868 3.314541 ACACACGATTAGGAACCTGTC 57.685 47.619 3.36 1.49 0.00 3.51
1500 3879 2.280628 GGAACCTGTCCTTTAGCATCG 58.719 52.381 0.00 0.00 43.98 3.84
1501 3880 1.666189 GAACCTGTCCTTTAGCATCGC 59.334 52.381 0.00 0.00 0.00 4.58
1502 3881 0.905357 ACCTGTCCTTTAGCATCGCT 59.095 50.000 0.00 0.00 43.41 4.93
1503 3882 1.293924 CCTGTCCTTTAGCATCGCTG 58.706 55.000 0.00 0.00 40.10 5.18
1504 3883 1.406069 CCTGTCCTTTAGCATCGCTGT 60.406 52.381 0.00 0.00 40.10 4.40
1505 3884 1.662629 CTGTCCTTTAGCATCGCTGTG 59.337 52.381 0.00 0.00 40.10 3.66
1506 3885 1.275010 TGTCCTTTAGCATCGCTGTGA 59.725 47.619 0.00 0.00 40.10 3.58
1507 3886 1.929836 GTCCTTTAGCATCGCTGTGAG 59.070 52.381 0.00 0.00 40.10 3.51
1508 3887 1.134699 TCCTTTAGCATCGCTGTGAGG 60.135 52.381 0.00 0.00 40.10 3.86
1509 3888 1.406069 CCTTTAGCATCGCTGTGAGGT 60.406 52.381 4.72 1.95 40.10 3.85
1510 3889 1.662629 CTTTAGCATCGCTGTGAGGTG 59.337 52.381 4.72 0.00 40.10 4.00
1511 3890 0.894835 TTAGCATCGCTGTGAGGTGA 59.105 50.000 4.72 0.00 40.10 4.02
1512 3891 1.114627 TAGCATCGCTGTGAGGTGAT 58.885 50.000 4.72 0.00 40.10 3.06
1513 3892 0.179089 AGCATCGCTGTGAGGTGATC 60.179 55.000 4.72 0.00 37.57 2.92
1514 3893 1.485838 GCATCGCTGTGAGGTGATCG 61.486 60.000 4.72 0.00 34.67 3.69
1515 3894 0.873312 CATCGCTGTGAGGTGATCGG 60.873 60.000 0.00 0.00 34.67 4.18
1516 3895 2.021068 ATCGCTGTGAGGTGATCGGG 62.021 60.000 0.00 0.00 31.75 5.14
1517 3896 2.512515 GCTGTGAGGTGATCGGGC 60.513 66.667 0.00 0.00 0.00 6.13
1518 3897 2.202797 CTGTGAGGTGATCGGGCG 60.203 66.667 0.00 0.00 0.00 6.13
1519 3898 2.678580 TGTGAGGTGATCGGGCGA 60.679 61.111 0.00 0.00 0.00 5.54
1520 3899 2.021068 CTGTGAGGTGATCGGGCGAT 62.021 60.000 0.00 0.00 37.59 4.58
1521 3900 1.144057 GTGAGGTGATCGGGCGATT 59.856 57.895 0.00 0.00 34.60 3.34
1522 3901 0.462047 GTGAGGTGATCGGGCGATTT 60.462 55.000 0.00 0.00 34.60 2.17
1523 3902 1.116308 TGAGGTGATCGGGCGATTTA 58.884 50.000 0.00 0.00 34.60 1.40
1562 3941 7.121315 AGGACTTAAATGCCTTAATGTGAGTTC 59.879 37.037 0.00 0.00 0.00 3.01
1588 3967 9.224267 CCTATTTATAGATTCACATGGAACAGG 57.776 37.037 0.00 0.00 38.60 4.00
1632 4011 6.182507 TCCTCCACTACTTTGCTTAGAAAA 57.817 37.500 0.00 0.00 0.00 2.29
1785 4168 0.108138 AACCATCTGTGACCGCTAGC 60.108 55.000 4.06 4.06 0.00 3.42
1842 4225 3.183754 TGACAACCGCTTATATGACGTG 58.816 45.455 0.00 0.00 0.00 4.49
1843 4226 3.184541 GACAACCGCTTATATGACGTGT 58.815 45.455 0.00 0.00 0.00 4.49
1844 4227 3.592059 ACAACCGCTTATATGACGTGTT 58.408 40.909 0.00 0.00 0.00 3.32
1845 4228 4.746729 ACAACCGCTTATATGACGTGTTA 58.253 39.130 0.00 0.00 0.00 2.41
1846 4229 5.353938 ACAACCGCTTATATGACGTGTTAT 58.646 37.500 0.00 0.00 0.00 1.89
1847 4230 5.233476 ACAACCGCTTATATGACGTGTTATG 59.767 40.000 0.00 0.00 0.00 1.90
1848 4231 5.190992 ACCGCTTATATGACGTGTTATGA 57.809 39.130 0.00 0.00 0.00 2.15
1866 4256 9.807386 GTGTTATGAGTTATGAACTGTTACAAC 57.193 33.333 0.00 0.00 43.03 3.32
1915 4305 5.531634 TCATTTGTGGAGCACATTTCTTTC 58.468 37.500 0.00 0.00 44.16 2.62
2001 4391 2.370519 TCCAAATTCAGTTCCCACGAGA 59.629 45.455 0.00 0.00 0.00 4.04
2031 4421 5.269505 AGTAGTCCACTATCAGACAATGC 57.730 43.478 0.00 0.00 34.98 3.56
2552 5003 5.238432 AGCTACAATCGTCAGACATCTCTAG 59.762 44.000 0.41 0.00 0.00 2.43
2580 5031 2.376109 CAAGCTGATCCATCTTTGGCT 58.624 47.619 0.00 0.00 43.29 4.75
3043 5507 7.497249 ACTGATCTAATTGTCTTCTGTAATGGC 59.503 37.037 0.00 0.00 0.00 4.40
3136 5600 8.648693 ACCTTGAACTGTAGTATAACTTCAACT 58.351 33.333 0.00 0.00 0.00 3.16
3412 5879 4.497291 ACCTGGACTCTGTTTTGTTACA 57.503 40.909 0.00 0.00 0.00 2.41
3479 5946 8.474710 TGTATCAGTTTATTAGTACTCCCTCC 57.525 38.462 0.00 0.00 0.00 4.30
3480 5947 6.651975 ATCAGTTTATTAGTACTCCCTCCG 57.348 41.667 0.00 0.00 0.00 4.63
3481 5948 5.513233 TCAGTTTATTAGTACTCCCTCCGT 58.487 41.667 0.00 0.00 0.00 4.69
3482 5949 5.591877 TCAGTTTATTAGTACTCCCTCCGTC 59.408 44.000 0.00 0.00 0.00 4.79
3483 5950 5.593502 CAGTTTATTAGTACTCCCTCCGTCT 59.406 44.000 0.00 0.00 0.00 4.18
3484 5951 5.827267 AGTTTATTAGTACTCCCTCCGTCTC 59.173 44.000 0.00 0.00 0.00 3.36
3485 5952 3.947612 ATTAGTACTCCCTCCGTCTCA 57.052 47.619 0.00 0.00 0.00 3.27
3486 5953 3.726557 TTAGTACTCCCTCCGTCTCAA 57.273 47.619 0.00 0.00 0.00 3.02
3487 5954 2.599408 AGTACTCCCTCCGTCTCAAA 57.401 50.000 0.00 0.00 0.00 2.69
3488 5955 2.885616 AGTACTCCCTCCGTCTCAAAA 58.114 47.619 0.00 0.00 0.00 2.44
3489 5956 3.442076 AGTACTCCCTCCGTCTCAAAAT 58.558 45.455 0.00 0.00 0.00 1.82
3490 5957 3.838903 AGTACTCCCTCCGTCTCAAAATT 59.161 43.478 0.00 0.00 0.00 1.82
3491 5958 3.336138 ACTCCCTCCGTCTCAAAATTC 57.664 47.619 0.00 0.00 0.00 2.17
3492 5959 2.907042 ACTCCCTCCGTCTCAAAATTCT 59.093 45.455 0.00 0.00 0.00 2.40
3493 5960 3.328050 ACTCCCTCCGTCTCAAAATTCTT 59.672 43.478 0.00 0.00 0.00 2.52
3494 5961 3.674997 TCCCTCCGTCTCAAAATTCTTG 58.325 45.455 0.00 0.00 0.00 3.02
3495 5962 3.072476 TCCCTCCGTCTCAAAATTCTTGT 59.928 43.478 0.00 0.00 0.00 3.16
3496 5963 3.437049 CCCTCCGTCTCAAAATTCTTGTC 59.563 47.826 0.00 0.00 0.00 3.18
3497 5964 4.319177 CCTCCGTCTCAAAATTCTTGTCT 58.681 43.478 0.00 0.00 0.00 3.41
3498 5965 4.757149 CCTCCGTCTCAAAATTCTTGTCTT 59.243 41.667 0.00 0.00 0.00 3.01
3499 5966 5.932303 CCTCCGTCTCAAAATTCTTGTCTTA 59.068 40.000 0.00 0.00 0.00 2.10
3500 5967 6.091441 CCTCCGTCTCAAAATTCTTGTCTTAG 59.909 42.308 0.00 0.00 0.00 2.18
3501 5968 6.755206 TCCGTCTCAAAATTCTTGTCTTAGA 58.245 36.000 0.00 0.00 0.00 2.10
3502 5969 7.386851 TCCGTCTCAAAATTCTTGTCTTAGAT 58.613 34.615 0.00 0.00 0.00 1.98
3503 5970 7.878127 TCCGTCTCAAAATTCTTGTCTTAGATT 59.122 33.333 0.00 0.00 0.00 2.40
3504 5971 8.507249 CCGTCTCAAAATTCTTGTCTTAGATTT 58.493 33.333 0.00 0.00 0.00 2.17
3505 5972 9.322776 CGTCTCAAAATTCTTGTCTTAGATTTG 57.677 33.333 0.00 0.00 30.65 2.32
3516 5983 9.582431 TCTTGTCTTAGATTTGTCTAAATACGG 57.418 33.333 0.26 0.99 36.66 4.02
3517 5984 9.582431 CTTGTCTTAGATTTGTCTAAATACGGA 57.418 33.333 0.26 0.00 36.66 4.69
3519 5986 9.529325 TGTCTTAGATTTGTCTAAATACGGATG 57.471 33.333 0.26 0.00 36.66 3.51
3520 5987 9.530633 GTCTTAGATTTGTCTAAATACGGATGT 57.469 33.333 0.26 0.00 36.66 3.06
3527 5994 9.832445 ATTTGTCTAAATACGGATGTATCAAGT 57.168 29.630 0.00 0.00 40.42 3.16
3528 5995 8.867112 TTGTCTAAATACGGATGTATCAAGTC 57.133 34.615 0.00 0.00 40.42 3.01
3529 5996 8.002984 TGTCTAAATACGGATGTATCAAGTCA 57.997 34.615 0.00 0.00 40.42 3.41
3530 5997 7.919091 TGTCTAAATACGGATGTATCAAGTCAC 59.081 37.037 0.00 0.00 40.42 3.67
3531 5998 7.919091 GTCTAAATACGGATGTATCAAGTCACA 59.081 37.037 0.00 0.00 40.42 3.58
3532 5999 8.638873 TCTAAATACGGATGTATCAAGTCACAT 58.361 33.333 0.00 0.00 40.42 3.21
3533 6000 9.261180 CTAAATACGGATGTATCAAGTCACATT 57.739 33.333 0.00 0.00 40.42 2.71
3534 6001 8.506168 AAATACGGATGTATCAAGTCACATTT 57.494 30.769 0.00 0.00 40.42 2.32
3535 6002 8.506168 AATACGGATGTATCAAGTCACATTTT 57.494 30.769 0.00 0.00 40.42 1.82
3536 6003 9.607988 AATACGGATGTATCAAGTCACATTTTA 57.392 29.630 0.00 0.00 40.42 1.52
3537 6004 7.539712 ACGGATGTATCAAGTCACATTTTAG 57.460 36.000 0.00 0.00 35.55 1.85
3538 6005 7.103641 ACGGATGTATCAAGTCACATTTTAGT 58.896 34.615 0.00 0.00 35.55 2.24
3539 6006 8.255206 ACGGATGTATCAAGTCACATTTTAGTA 58.745 33.333 0.00 0.00 35.55 1.82
3540 6007 9.261180 CGGATGTATCAAGTCACATTTTAGTAT 57.739 33.333 0.00 0.00 35.55 2.12
3584 6051 8.579863 AGACAAATCTAAGACAAGAATTTTGGG 58.420 33.333 0.00 0.00 33.04 4.12
3585 6052 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
3586 6053 8.360390 ACAAATCTAAGACAAGAATTTTGGGAC 58.640 33.333 0.00 0.00 33.04 4.46
3587 6054 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
3588 6055 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
3589 6056 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
3590 6057 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
3591 6058 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
3592 6059 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
3593 6060 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
3594 6061 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
3595 6062 1.004394 GAATTTTGGGACGGAGGGAGT 59.996 52.381 0.00 0.00 0.00 3.85
3596 6063 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
3691 6161 9.209175 AGAGATTTCAATATGGACTAAATACGC 57.791 33.333 0.00 0.00 0.00 4.42
3736 6206 9.627395 ACACTCTAAAATGCGTCTATATACATC 57.373 33.333 0.00 0.00 0.00 3.06
3737 6207 9.847706 CACTCTAAAATGCGTCTATATACATCT 57.152 33.333 0.00 0.00 0.00 2.90
3738 6208 9.847706 ACTCTAAAATGCGTCTATATACATCTG 57.152 33.333 0.00 0.00 0.00 2.90
3759 6229 9.908152 CATCTGTATGTAGTCCGTATTGAAATA 57.092 33.333 0.00 0.00 0.00 1.40
3789 6259 8.974060 AAATGGCTTATATTTAGAAACGGAGA 57.026 30.769 0.00 0.00 0.00 3.71
3805 6275 2.271800 GGAGAGAGTATGTTGTTGCGG 58.728 52.381 0.00 0.00 0.00 5.69
4286 7189 1.865865 AGTACTGGTTGCTTCACGTG 58.134 50.000 9.94 9.94 0.00 4.49
4326 7229 6.042437 AGTGATGGCATCTATGATCAGTACAA 59.958 38.462 26.49 0.00 28.61 2.41
4473 7382 4.745125 CCATTTGTCTATTATCGCGAGTGT 59.255 41.667 16.66 4.98 0.00 3.55
4475 7384 6.238103 CCATTTGTCTATTATCGCGAGTGTTT 60.238 38.462 16.66 0.00 0.00 2.83
4476 7385 6.715344 TTTGTCTATTATCGCGAGTGTTTT 57.285 33.333 16.66 0.00 0.00 2.43
4478 7387 5.647589 TGTCTATTATCGCGAGTGTTTTCT 58.352 37.500 16.66 0.00 0.00 2.52
4480 7389 6.034577 TGTCTATTATCGCGAGTGTTTTCTTG 59.965 38.462 16.66 0.00 0.00 3.02
4481 7390 3.449322 TTATCGCGAGTGTTTTCTTGC 57.551 42.857 16.66 0.00 40.37 4.01
4482 7391 1.225855 ATCGCGAGTGTTTTCTTGCA 58.774 45.000 16.66 0.00 42.98 4.08
4483 7392 1.010580 TCGCGAGTGTTTTCTTGCAA 58.989 45.000 3.71 0.00 42.98 4.08
4484 7393 1.601903 TCGCGAGTGTTTTCTTGCAAT 59.398 42.857 3.71 0.00 42.98 3.56
4485 7394 1.710249 CGCGAGTGTTTTCTTGCAATG 59.290 47.619 0.00 0.00 42.98 2.82
4486 7395 2.601979 CGCGAGTGTTTTCTTGCAATGA 60.602 45.455 0.00 0.00 42.98 2.57
4487 7396 3.371168 GCGAGTGTTTTCTTGCAATGAA 58.629 40.909 0.00 3.36 42.54 2.57
4488 7397 3.983344 GCGAGTGTTTTCTTGCAATGAAT 59.017 39.130 0.00 0.00 42.54 2.57
4489 7398 4.143473 GCGAGTGTTTTCTTGCAATGAATG 60.143 41.667 0.00 0.00 42.54 2.67
4490 7399 4.383649 CGAGTGTTTTCTTGCAATGAATGG 59.616 41.667 0.00 0.00 29.54 3.16
4519 7428 2.664851 TGCAAGCTGAACCGTCCG 60.665 61.111 0.00 0.00 0.00 4.79
4624 7533 1.062525 GATTCACGAATGCACGGGC 59.937 57.895 0.34 0.34 36.57 6.13
4795 7704 2.569404 AGACATCAGGGAGGAACTTGAC 59.431 50.000 0.00 0.00 41.55 3.18
4797 7706 2.304180 ACATCAGGGAGGAACTTGACAG 59.696 50.000 0.00 0.00 41.55 3.51
4830 7739 2.928116 GCAAATGGACGGTACAGACTAC 59.072 50.000 0.00 0.00 0.00 2.73
4841 7750 4.667668 CGGTACAGACTACAGTAACGACAC 60.668 50.000 4.18 0.00 46.76 3.67
4850 7759 3.829948 ACAGTAACGACACCACGATTAG 58.170 45.455 0.00 0.00 37.03 1.73
4929 7838 3.314635 GGACACCGTGTATCTAGACGAAT 59.685 47.826 3.58 0.00 44.54 3.34
5061 7971 8.534778 GGCTTAAATCGCTCAAATTCAATTTAG 58.465 33.333 0.00 0.00 0.00 1.85
5067 7977 4.142687 CGCTCAAATTCAATTTAGGACCGT 60.143 41.667 0.00 0.00 0.00 4.83
5072 7982 8.801882 TCAAATTCAATTTAGGACCGTATTCT 57.198 30.769 0.00 0.00 0.00 2.40
5129 8039 7.553881 AATTCAAATGAATCGATCTACCGTT 57.446 32.000 8.96 0.00 43.41 4.44
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.453054 GGGGTGGGGTCTAGTGGA 59.547 66.667 0.00 0.00 0.00 4.02
1 2 1.995626 CTGGGGTGGGGTCTAGTGG 60.996 68.421 0.00 0.00 0.00 4.00
3 4 2.285442 GCTGGGGTGGGGTCTAGT 60.285 66.667 0.00 0.00 0.00 2.57
4 5 2.041265 AGCTGGGGTGGGGTCTAG 59.959 66.667 0.00 0.00 0.00 2.43
5 6 1.226104 TAGAGCTGGGGTGGGGTCTA 61.226 60.000 0.00 0.00 40.22 2.59
7 8 2.040606 TAGAGCTGGGGTGGGGTC 59.959 66.667 0.00 0.00 0.00 4.46
8 9 2.041265 CTAGAGCTGGGGTGGGGT 59.959 66.667 0.00 0.00 0.00 4.95
9 10 3.483869 GCTAGAGCTGGGGTGGGG 61.484 72.222 0.00 0.00 38.21 4.96
10 11 2.688666 TGCTAGAGCTGGGGTGGG 60.689 66.667 2.72 0.00 42.66 4.61
11 12 1.687146 TCTGCTAGAGCTGGGGTGG 60.687 63.158 8.35 0.00 42.66 4.61
12 13 1.519719 GTCTGCTAGAGCTGGGGTG 59.480 63.158 8.35 0.00 42.66 4.61
13 14 2.055042 CGTCTGCTAGAGCTGGGGT 61.055 63.158 8.35 0.00 42.66 4.95
14 15 2.790791 CCGTCTGCTAGAGCTGGGG 61.791 68.421 8.35 6.76 42.66 4.96
15 16 2.811101 CCGTCTGCTAGAGCTGGG 59.189 66.667 8.35 0.01 42.66 4.45
16 17 2.105930 GCCGTCTGCTAGAGCTGG 59.894 66.667 8.35 4.01 42.66 4.85
17 18 0.390340 TTTGCCGTCTGCTAGAGCTG 60.390 55.000 2.72 2.45 42.66 4.24
18 19 0.108424 CTTTGCCGTCTGCTAGAGCT 60.108 55.000 2.72 0.00 42.66 4.09
19 20 0.108615 TCTTTGCCGTCTGCTAGAGC 60.109 55.000 0.00 0.00 42.00 4.09
20 21 1.996191 GTTCTTTGCCGTCTGCTAGAG 59.004 52.381 0.00 0.00 42.00 2.43
21 22 1.618837 AGTTCTTTGCCGTCTGCTAGA 59.381 47.619 0.00 0.00 42.00 2.43
22 23 1.728971 CAGTTCTTTGCCGTCTGCTAG 59.271 52.381 0.00 0.00 42.00 3.42
23 24 1.343142 TCAGTTCTTTGCCGTCTGCTA 59.657 47.619 0.00 0.00 42.00 3.49
24 25 0.106708 TCAGTTCTTTGCCGTCTGCT 59.893 50.000 0.00 0.00 42.00 4.24
25 26 0.235926 GTCAGTTCTTTGCCGTCTGC 59.764 55.000 0.00 0.00 41.77 4.26
26 27 1.528586 CAGTCAGTTCTTTGCCGTCTG 59.471 52.381 0.00 0.00 0.00 3.51
27 28 1.412710 TCAGTCAGTTCTTTGCCGTCT 59.587 47.619 0.00 0.00 0.00 4.18
28 29 1.865865 TCAGTCAGTTCTTTGCCGTC 58.134 50.000 0.00 0.00 0.00 4.79
29 30 2.146342 CATCAGTCAGTTCTTTGCCGT 58.854 47.619 0.00 0.00 0.00 5.68
30 31 1.466167 CCATCAGTCAGTTCTTTGCCG 59.534 52.381 0.00 0.00 0.00 5.69
31 32 1.200948 GCCATCAGTCAGTTCTTTGCC 59.799 52.381 0.00 0.00 0.00 4.52
32 33 1.881973 TGCCATCAGTCAGTTCTTTGC 59.118 47.619 0.00 0.00 0.00 3.68
33 34 4.572985 TTTGCCATCAGTCAGTTCTTTG 57.427 40.909 0.00 0.00 0.00 2.77
34 35 6.006449 ACTATTTGCCATCAGTCAGTTCTTT 58.994 36.000 0.00 0.00 0.00 2.52
35 36 5.564550 ACTATTTGCCATCAGTCAGTTCTT 58.435 37.500 0.00 0.00 0.00 2.52
36 37 5.171339 ACTATTTGCCATCAGTCAGTTCT 57.829 39.130 0.00 0.00 0.00 3.01
37 38 6.989169 AGATACTATTTGCCATCAGTCAGTTC 59.011 38.462 0.00 0.00 0.00 3.01
38 39 6.893583 AGATACTATTTGCCATCAGTCAGTT 58.106 36.000 0.00 0.00 0.00 3.16
39 40 6.491714 AGATACTATTTGCCATCAGTCAGT 57.508 37.500 0.00 0.00 0.00 3.41
40 41 7.637229 CAAAGATACTATTTGCCATCAGTCAG 58.363 38.462 0.00 0.00 31.46 3.51
41 42 7.558161 CAAAGATACTATTTGCCATCAGTCA 57.442 36.000 0.00 0.00 31.46 3.41
51 52 5.300034 TGGCTGATGGCAAAGATACTATTTG 59.700 40.000 4.85 0.00 46.03 2.32
52 53 5.448654 TGGCTGATGGCAAAGATACTATTT 58.551 37.500 4.85 0.00 46.03 1.40
53 54 5.052693 TGGCTGATGGCAAAGATACTATT 57.947 39.130 4.85 0.00 46.03 1.73
54 55 4.712051 TGGCTGATGGCAAAGATACTAT 57.288 40.909 4.85 0.00 46.03 2.12
65 66 1.648504 GCAAAGAAATGGCTGATGGC 58.351 50.000 0.00 0.00 40.90 4.40
66 67 1.551430 TGGCAAAGAAATGGCTGATGG 59.449 47.619 2.54 0.00 45.45 3.51
67 68 3.132289 AGATGGCAAAGAAATGGCTGATG 59.868 43.478 0.00 0.00 45.45 3.07
68 69 3.132289 CAGATGGCAAAGAAATGGCTGAT 59.868 43.478 0.00 0.00 45.45 2.90
69 70 2.494471 CAGATGGCAAAGAAATGGCTGA 59.506 45.455 0.00 0.00 45.45 4.26
70 71 2.232941 ACAGATGGCAAAGAAATGGCTG 59.767 45.455 0.00 0.00 45.45 4.85
71 72 2.532843 ACAGATGGCAAAGAAATGGCT 58.467 42.857 0.00 0.00 45.45 4.75
72 73 3.323751 AACAGATGGCAAAGAAATGGC 57.676 42.857 0.00 0.00 45.44 4.40
92 93 3.378742 TCTTTGCCGTCTGCTTACAAAAA 59.621 39.130 0.00 0.00 42.00 1.94
93 94 2.946329 TCTTTGCCGTCTGCTTACAAAA 59.054 40.909 0.00 0.00 42.00 2.44
94 95 2.289547 GTCTTTGCCGTCTGCTTACAAA 59.710 45.455 0.00 0.00 42.00 2.83
95 96 1.871039 GTCTTTGCCGTCTGCTTACAA 59.129 47.619 0.00 0.00 42.00 2.41
96 97 1.202592 TGTCTTTGCCGTCTGCTTACA 60.203 47.619 0.00 0.00 42.00 2.41
97 98 1.508632 TGTCTTTGCCGTCTGCTTAC 58.491 50.000 0.00 0.00 42.00 2.34
98 99 2.472695 ATGTCTTTGCCGTCTGCTTA 57.527 45.000 0.00 0.00 42.00 3.09
99 100 1.537202 GAATGTCTTTGCCGTCTGCTT 59.463 47.619 0.00 0.00 42.00 3.91
100 101 1.160137 GAATGTCTTTGCCGTCTGCT 58.840 50.000 0.00 0.00 42.00 4.24
101 102 1.160137 AGAATGTCTTTGCCGTCTGC 58.840 50.000 0.00 0.00 41.77 4.26
102 103 3.904136 AAAGAATGTCTTTGCCGTCTG 57.096 42.857 2.50 0.00 44.34 3.51
110 111 2.030805 GCTGACGGCAAAGAATGTCTTT 60.031 45.455 0.00 0.00 46.75 2.52
111 112 1.537202 GCTGACGGCAAAGAATGTCTT 59.463 47.619 0.00 0.00 38.59 3.01
112 113 1.160137 GCTGACGGCAAAGAATGTCT 58.840 50.000 0.00 0.00 41.35 3.41
113 114 1.160137 AGCTGACGGCAAAGAATGTC 58.840 50.000 9.39 0.00 44.79 3.06
114 115 2.350522 CTAGCTGACGGCAAAGAATGT 58.649 47.619 9.39 0.00 44.79 2.71
115 116 1.063174 GCTAGCTGACGGCAAAGAATG 59.937 52.381 7.70 0.00 44.79 2.67
116 117 1.065854 AGCTAGCTGACGGCAAAGAAT 60.066 47.619 18.57 0.00 44.79 2.40
117 118 0.321671 AGCTAGCTGACGGCAAAGAA 59.678 50.000 18.57 0.00 44.79 2.52
118 119 0.390340 CAGCTAGCTGACGGCAAAGA 60.390 55.000 36.47 0.00 46.30 2.52
119 120 0.390340 TCAGCTAGCTGACGGCAAAG 60.390 55.000 37.64 14.25 46.80 2.77
120 121 1.671166 TCAGCTAGCTGACGGCAAA 59.329 52.632 37.64 18.34 46.80 3.68
121 122 3.376546 TCAGCTAGCTGACGGCAA 58.623 55.556 37.64 19.05 46.80 4.52
128 129 2.354109 TCTTTGTCGTCAGCTAGCTG 57.646 50.000 34.48 34.48 44.86 4.24
129 130 2.297597 AGTTCTTTGTCGTCAGCTAGCT 59.702 45.455 12.68 12.68 0.00 3.32
130 131 2.410053 CAGTTCTTTGTCGTCAGCTAGC 59.590 50.000 6.62 6.62 0.00 3.42
131 132 2.989840 CCAGTTCTTTGTCGTCAGCTAG 59.010 50.000 0.00 0.00 0.00 3.42
132 133 2.866460 GCCAGTTCTTTGTCGTCAGCTA 60.866 50.000 0.00 0.00 0.00 3.32
133 134 1.871080 CCAGTTCTTTGTCGTCAGCT 58.129 50.000 0.00 0.00 0.00 4.24
134 135 0.235926 GCCAGTTCTTTGTCGTCAGC 59.764 55.000 0.00 0.00 0.00 4.26
135 136 1.528586 CAGCCAGTTCTTTGTCGTCAG 59.471 52.381 0.00 0.00 0.00 3.51
136 137 1.138069 TCAGCCAGTTCTTTGTCGTCA 59.862 47.619 0.00 0.00 0.00 4.35
137 138 1.865865 TCAGCCAGTTCTTTGTCGTC 58.134 50.000 0.00 0.00 0.00 4.20
138 139 2.146342 CATCAGCCAGTTCTTTGTCGT 58.854 47.619 0.00 0.00 0.00 4.34
139 140 1.466167 CCATCAGCCAGTTCTTTGTCG 59.534 52.381 0.00 0.00 0.00 4.35
140 141 1.200948 GCCATCAGCCAGTTCTTTGTC 59.799 52.381 0.00 0.00 34.35 3.18
141 142 1.251251 GCCATCAGCCAGTTCTTTGT 58.749 50.000 0.00 0.00 34.35 2.83
142 143 1.250328 TGCCATCAGCCAGTTCTTTG 58.750 50.000 0.00 0.00 42.71 2.77
143 144 1.999648 TTGCCATCAGCCAGTTCTTT 58.000 45.000 0.00 0.00 42.71 2.52
144 145 1.999648 TTTGCCATCAGCCAGTTCTT 58.000 45.000 0.00 0.00 42.71 2.52
145 146 2.226962 ATTTGCCATCAGCCAGTTCT 57.773 45.000 0.00 0.00 42.71 3.01
146 147 2.417787 GGAATTTGCCATCAGCCAGTTC 60.418 50.000 0.00 0.00 42.71 3.01
147 148 1.551883 GGAATTTGCCATCAGCCAGTT 59.448 47.619 0.00 0.00 42.71 3.16
148 149 1.188863 GGAATTTGCCATCAGCCAGT 58.811 50.000 0.00 0.00 42.71 4.00
149 150 0.462789 GGGAATTTGCCATCAGCCAG 59.537 55.000 1.50 0.00 42.71 4.85
150 151 0.041535 AGGGAATTTGCCATCAGCCA 59.958 50.000 9.80 0.00 42.71 4.75
151 152 0.462789 CAGGGAATTTGCCATCAGCC 59.537 55.000 9.80 0.00 42.71 4.85
152 153 1.477553 TCAGGGAATTTGCCATCAGC 58.522 50.000 9.80 0.00 44.14 4.26
153 154 3.069158 GGAATCAGGGAATTTGCCATCAG 59.931 47.826 9.80 0.00 0.00 2.90
154 155 3.033184 GGAATCAGGGAATTTGCCATCA 58.967 45.455 9.80 0.00 0.00 3.07
155 156 3.033184 TGGAATCAGGGAATTTGCCATC 58.967 45.455 9.80 2.27 0.00 3.51
156 157 3.036091 CTGGAATCAGGGAATTTGCCAT 58.964 45.455 9.80 0.00 37.36 4.40
157 158 2.225343 ACTGGAATCAGGGAATTTGCCA 60.225 45.455 9.80 0.00 44.99 4.92
158 159 2.460669 ACTGGAATCAGGGAATTTGCC 58.539 47.619 0.00 0.00 44.99 4.52
159 160 4.096984 CACTACTGGAATCAGGGAATTTGC 59.903 45.833 0.00 0.00 44.99 3.68
160 161 4.096984 GCACTACTGGAATCAGGGAATTTG 59.903 45.833 0.00 0.00 44.99 2.32
161 162 4.263905 TGCACTACTGGAATCAGGGAATTT 60.264 41.667 0.00 0.00 44.99 1.82
162 163 3.266772 TGCACTACTGGAATCAGGGAATT 59.733 43.478 0.00 0.00 44.99 2.17
163 164 2.846206 TGCACTACTGGAATCAGGGAAT 59.154 45.455 0.00 0.00 44.99 3.01
164 165 2.265367 TGCACTACTGGAATCAGGGAA 58.735 47.619 0.00 0.00 44.99 3.97
165 166 1.951209 TGCACTACTGGAATCAGGGA 58.049 50.000 0.00 0.00 44.99 4.20
166 167 3.495100 GGTATGCACTACTGGAATCAGGG 60.495 52.174 0.00 0.00 44.99 4.45
167 168 3.495100 GGGTATGCACTACTGGAATCAGG 60.495 52.174 0.00 0.00 44.99 3.86
168 169 3.389329 AGGGTATGCACTACTGGAATCAG 59.611 47.826 0.00 0.00 46.10 2.90
169 170 3.384168 AGGGTATGCACTACTGGAATCA 58.616 45.455 0.00 0.00 0.00 2.57
170 171 3.388024 TGAGGGTATGCACTACTGGAATC 59.612 47.826 0.00 0.00 0.00 2.52
171 172 3.384168 TGAGGGTATGCACTACTGGAAT 58.616 45.455 0.00 0.00 0.00 3.01
172 173 2.766263 CTGAGGGTATGCACTACTGGAA 59.234 50.000 0.00 0.00 0.00 3.53
173 174 2.388735 CTGAGGGTATGCACTACTGGA 58.611 52.381 0.00 0.00 0.00 3.86
174 175 1.202580 GCTGAGGGTATGCACTACTGG 60.203 57.143 0.00 0.00 0.00 4.00
175 176 1.202580 GGCTGAGGGTATGCACTACTG 60.203 57.143 0.00 0.00 0.00 2.74
176 177 1.123928 GGCTGAGGGTATGCACTACT 58.876 55.000 0.00 0.00 0.00 2.57
177 178 1.069358 GAGGCTGAGGGTATGCACTAC 59.931 57.143 0.00 0.00 0.00 2.73
182 183 1.365633 CTCGAGGCTGAGGGTATGC 59.634 63.158 3.91 0.00 32.18 3.14
217 218 5.477291 ACTTCTCCTCAGTTCTCATCGTAAA 59.523 40.000 0.00 0.00 0.00 2.01
219 220 4.590918 ACTTCTCCTCAGTTCTCATCGTA 58.409 43.478 0.00 0.00 0.00 3.43
222 223 4.020662 ACCAACTTCTCCTCAGTTCTCATC 60.021 45.833 0.00 0.00 31.83 2.92
231 232 1.801242 TCACCACCAACTTCTCCTCA 58.199 50.000 0.00 0.00 0.00 3.86
314 318 3.177228 CAAGGAAGAAGAAGGAGGAGGA 58.823 50.000 0.00 0.00 0.00 3.71
369 387 3.192422 ACAGAAGACAACAGAGAGATCCG 59.808 47.826 0.00 0.00 0.00 4.18
440 458 1.920351 ACCCAACCGGAGTTATGGATT 59.080 47.619 9.46 0.00 33.27 3.01
454 472 4.967036 TCCCATCAAAATTTCAACCCAAC 58.033 39.130 0.00 0.00 0.00 3.77
472 490 7.475137 AGACAATTTTCGGATAAAATTCCCA 57.525 32.000 5.67 0.00 37.64 4.37
538 556 2.048603 GGCCCTGATGTCTTGTGGC 61.049 63.158 0.00 0.00 38.16 5.01
557 635 1.133407 GAGGCGTCCACAAAACAACAA 59.867 47.619 0.00 0.00 0.00 2.83
778 859 0.992695 AAGGTTCTCCCTGGTTAGCC 59.007 55.000 0.00 0.00 45.47 3.93
779 860 3.181453 GGATAAGGTTCTCCCTGGTTAGC 60.181 52.174 0.00 0.00 45.47 3.09
780 861 3.391626 GGGATAAGGTTCTCCCTGGTTAG 59.608 52.174 6.02 0.00 45.47 2.34
781 862 3.390819 GGGATAAGGTTCTCCCTGGTTA 58.609 50.000 6.02 0.00 45.47 2.85
783 864 1.894699 GGGATAAGGTTCTCCCTGGT 58.105 55.000 6.02 0.00 45.47 4.00
788 869 6.292150 CAAGTAAGATGGGATAAGGTTCTCC 58.708 44.000 0.00 0.00 0.00 3.71
789 870 5.760743 GCAAGTAAGATGGGATAAGGTTCTC 59.239 44.000 0.00 0.00 0.00 2.87
790 871 5.685075 CGCAAGTAAGATGGGATAAGGTTCT 60.685 44.000 0.00 0.00 32.93 3.01
791 872 4.511826 CGCAAGTAAGATGGGATAAGGTTC 59.488 45.833 0.00 0.00 32.93 3.62
795 876 4.336889 TCCGCAAGTAAGATGGGATAAG 57.663 45.455 0.00 0.00 32.93 1.73
796 877 4.974645 ATCCGCAAGTAAGATGGGATAA 57.025 40.909 0.00 0.00 32.74 1.75
797 878 6.620877 AATATCCGCAAGTAAGATGGGATA 57.379 37.500 0.55 0.55 39.92 2.59
798 879 5.505181 AATATCCGCAAGTAAGATGGGAT 57.495 39.130 0.00 0.00 37.91 3.85
799 880 4.974645 AATATCCGCAAGTAAGATGGGA 57.025 40.909 0.00 0.00 32.93 4.37
801 882 6.575083 CGATAATATCCGCAAGTAAGATGG 57.425 41.667 0.00 0.00 0.00 3.51
813 894 6.325596 TGAGATTTGAGAGCGATAATATCCG 58.674 40.000 0.00 0.00 0.00 4.18
814 895 8.539770 TTTGAGATTTGAGAGCGATAATATCC 57.460 34.615 0.00 0.00 0.00 2.59
817 898 8.777413 CCATTTTGAGATTTGAGAGCGATAATA 58.223 33.333 0.00 0.00 0.00 0.98
980 2627 3.523087 TTGCCACGTGCTAAGCGGA 62.523 57.895 10.91 0.00 42.00 5.54
983 3360 2.173382 CGTTGCCACGTGCTAAGC 59.827 61.111 10.91 8.91 41.84 3.09
1091 3468 1.858739 AAGAGGGCGGGTGGCAAATA 61.859 55.000 0.00 0.00 46.16 1.40
1343 3721 3.672295 CTCAGGCGCCCAGAGGAAC 62.672 68.421 29.51 2.71 34.17 3.62
1375 3753 3.390639 AGATTGGGAGAAGCTCGATCAAT 59.609 43.478 0.00 0.00 33.08 2.57
1381 3759 2.167281 TGAGAAGATTGGGAGAAGCTCG 59.833 50.000 0.00 0.00 0.00 5.03
1383 3761 4.858965 AATGAGAAGATTGGGAGAAGCT 57.141 40.909 0.00 0.00 0.00 3.74
1450 3829 2.483877 TGTAACCAAGCGCAATTCTCAG 59.516 45.455 11.47 0.00 0.00 3.35
1452 3831 2.225491 TGTGTAACCAAGCGCAATTCTC 59.775 45.455 11.47 0.00 34.36 2.87
1454 3833 2.315901 GTGTGTAACCAAGCGCAATTC 58.684 47.619 11.47 0.00 34.36 2.17
1480 3859 2.280628 CGATGCTAAAGGACAGGTTCC 58.719 52.381 0.00 0.00 46.33 3.62
1481 3860 1.666189 GCGATGCTAAAGGACAGGTTC 59.334 52.381 0.00 0.00 0.00 3.62
1482 3861 1.279271 AGCGATGCTAAAGGACAGGTT 59.721 47.619 0.00 0.00 36.99 3.50
1483 3862 0.905357 AGCGATGCTAAAGGACAGGT 59.095 50.000 0.00 0.00 36.99 4.00
1484 3863 1.293924 CAGCGATGCTAAAGGACAGG 58.706 55.000 0.00 0.00 36.40 4.00
1485 3864 1.662629 CACAGCGATGCTAAAGGACAG 59.337 52.381 0.00 0.00 36.40 3.51
1486 3865 1.275010 TCACAGCGATGCTAAAGGACA 59.725 47.619 0.00 0.00 36.40 4.02
1487 3866 1.929836 CTCACAGCGATGCTAAAGGAC 59.070 52.381 0.00 0.00 36.40 3.85
1488 3867 1.134699 CCTCACAGCGATGCTAAAGGA 60.135 52.381 0.00 0.00 36.40 3.36
1489 3868 1.293924 CCTCACAGCGATGCTAAAGG 58.706 55.000 0.00 0.00 36.40 3.11
1490 3869 1.662629 CACCTCACAGCGATGCTAAAG 59.337 52.381 0.00 0.00 36.40 1.85
1491 3870 1.275010 TCACCTCACAGCGATGCTAAA 59.725 47.619 0.00 0.00 36.40 1.85
1492 3871 0.894835 TCACCTCACAGCGATGCTAA 59.105 50.000 0.00 0.00 36.40 3.09
1493 3872 1.067669 GATCACCTCACAGCGATGCTA 59.932 52.381 0.00 0.00 36.40 3.49
1494 3873 0.179089 GATCACCTCACAGCGATGCT 60.179 55.000 0.00 0.00 40.77 3.79
1495 3874 1.485838 CGATCACCTCACAGCGATGC 61.486 60.000 0.00 0.00 0.00 3.91
1496 3875 0.873312 CCGATCACCTCACAGCGATG 60.873 60.000 0.00 0.00 0.00 3.84
1497 3876 1.439228 CCGATCACCTCACAGCGAT 59.561 57.895 0.00 0.00 0.00 4.58
1498 3877 2.710902 CCCGATCACCTCACAGCGA 61.711 63.158 0.00 0.00 0.00 4.93
1499 3878 2.202797 CCCGATCACCTCACAGCG 60.203 66.667 0.00 0.00 0.00 5.18
1500 3879 2.512515 GCCCGATCACCTCACAGC 60.513 66.667 0.00 0.00 0.00 4.40
1501 3880 2.021068 ATCGCCCGATCACCTCACAG 62.021 60.000 0.00 0.00 0.00 3.66
1502 3881 1.613317 AATCGCCCGATCACCTCACA 61.613 55.000 3.41 0.00 33.08 3.58
1503 3882 0.462047 AAATCGCCCGATCACCTCAC 60.462 55.000 3.41 0.00 33.08 3.51
1504 3883 1.116308 TAAATCGCCCGATCACCTCA 58.884 50.000 3.41 0.00 33.08 3.86
1505 3884 2.234300 TTAAATCGCCCGATCACCTC 57.766 50.000 3.41 0.00 33.08 3.85
1506 3885 2.930826 ATTAAATCGCCCGATCACCT 57.069 45.000 3.41 0.00 33.08 4.00
1507 3886 3.120304 GCTAATTAAATCGCCCGATCACC 60.120 47.826 3.41 0.00 33.08 4.02
1508 3887 3.746492 AGCTAATTAAATCGCCCGATCAC 59.254 43.478 3.41 0.00 33.08 3.06
1509 3888 3.994392 GAGCTAATTAAATCGCCCGATCA 59.006 43.478 3.41 0.00 33.08 2.92
1510 3889 3.994392 TGAGCTAATTAAATCGCCCGATC 59.006 43.478 3.41 0.00 33.08 3.69
1511 3890 4.002906 TGAGCTAATTAAATCGCCCGAT 57.997 40.909 0.00 0.00 36.23 4.18
1512 3891 3.462483 TGAGCTAATTAAATCGCCCGA 57.538 42.857 0.00 0.00 0.00 5.14
1513 3892 4.749245 ATTGAGCTAATTAAATCGCCCG 57.251 40.909 0.00 0.00 0.00 6.13
1514 3893 6.430000 TCCTAATTGAGCTAATTAAATCGCCC 59.570 38.462 0.00 0.00 39.93 6.13
1515 3894 7.173390 AGTCCTAATTGAGCTAATTAAATCGCC 59.827 37.037 0.00 0.00 39.93 5.54
1516 3895 8.089115 AGTCCTAATTGAGCTAATTAAATCGC 57.911 34.615 0.00 0.00 39.93 4.58
1523 3902 8.633561 GGCATTTAAGTCCTAATTGAGCTAATT 58.366 33.333 0.00 0.00 41.68 1.40
1562 3941 9.224267 CCTGTTCCATGTGAATCTATAAATAGG 57.776 37.037 0.00 0.00 34.90 2.57
1583 3962 6.891908 ACATGCAGTTTTATAGAATCCCTGTT 59.108 34.615 0.00 0.00 0.00 3.16
1588 3967 7.255277 GGAGGAACATGCAGTTTTATAGAATCC 60.255 40.741 0.00 0.00 41.51 3.01
1632 4011 5.660460 CCAGGTTGCAGAAACTAAACTTTT 58.340 37.500 0.00 0.00 38.92 2.27
1636 4015 2.360801 TGCCAGGTTGCAGAAACTAAAC 59.639 45.455 0.00 0.00 38.92 2.01
1820 4203 3.242944 CACGTCATATAAGCGGTTGTCAG 59.757 47.826 10.73 0.00 0.00 3.51
1842 4225 9.807386 GTGTTGTAACAGTTCATAACTCATAAC 57.193 33.333 0.00 0.00 40.46 1.89
1843 4226 9.772973 AGTGTTGTAACAGTTCATAACTCATAA 57.227 29.630 0.00 0.00 39.45 1.90
1845 4228 9.424319 CTAGTGTTGTAACAGTTCATAACTCAT 57.576 33.333 10.07 0.00 42.30 2.90
1846 4229 8.418662 ACTAGTGTTGTAACAGTTCATAACTCA 58.581 33.333 10.07 0.00 42.30 3.41
1847 4230 8.813643 ACTAGTGTTGTAACAGTTCATAACTC 57.186 34.615 10.07 0.00 42.30 3.01
1848 4231 7.594015 CGACTAGTGTTGTAACAGTTCATAACT 59.406 37.037 0.00 0.00 42.30 2.24
1959 4349 4.387598 GAGGAAATAGCAGCATGAGATGT 58.612 43.478 0.00 0.00 39.69 3.06
2001 4391 6.829811 GTCTGATAGTGGACTACTCCTTTAGT 59.170 42.308 0.00 0.00 40.89 2.24
2031 4421 0.605319 TTTGCTAGACTTGCCGGTGG 60.605 55.000 1.90 0.00 0.00 4.61
2043 4433 7.094463 ACCTTCATCAAGAACAGATTTTGCTAG 60.094 37.037 0.00 0.00 31.61 3.42
2305 4699 6.923012 TGCTTCAATAACAAACAGTGCATAT 58.077 32.000 0.00 0.00 0.00 1.78
2393 4828 4.338879 ACTTCATGGTCTCTTGGAATTGG 58.661 43.478 0.00 0.00 0.00 3.16
2552 5003 4.897140 AGATGGATCAGCTTGCTTATCTC 58.103 43.478 14.10 7.13 0.00 2.75
2580 5031 4.377021 CAGTGCTTACCTTTAGTGTGTCA 58.623 43.478 0.00 0.00 0.00 3.58
3043 5507 7.026631 TGCATTATCTAAATCCTTGAAACCG 57.973 36.000 0.00 0.00 0.00 4.44
3136 5600 8.134202 TGTAGGATAGAACAGAAGAATGTCAA 57.866 34.615 0.00 0.00 31.50 3.18
3472 5939 3.618690 AGAATTTTGAGACGGAGGGAG 57.381 47.619 0.00 0.00 0.00 4.30
3473 5940 3.072476 ACAAGAATTTTGAGACGGAGGGA 59.928 43.478 7.18 0.00 0.00 4.20
3474 5941 3.412386 ACAAGAATTTTGAGACGGAGGG 58.588 45.455 7.18 0.00 0.00 4.30
3475 5942 4.319177 AGACAAGAATTTTGAGACGGAGG 58.681 43.478 7.18 0.00 0.00 4.30
3476 5943 5.931441 AAGACAAGAATTTTGAGACGGAG 57.069 39.130 7.18 0.00 0.00 4.63
3477 5944 6.755206 TCTAAGACAAGAATTTTGAGACGGA 58.245 36.000 7.18 0.00 0.00 4.69
3478 5945 7.602517 ATCTAAGACAAGAATTTTGAGACGG 57.397 36.000 7.18 0.00 0.00 4.79
3479 5946 9.322776 CAAATCTAAGACAAGAATTTTGAGACG 57.677 33.333 7.18 0.00 31.51 4.18
3490 5957 9.582431 CCGTATTTAGACAAATCTAAGACAAGA 57.418 33.333 9.81 0.00 45.93 3.02
3491 5958 9.582431 TCCGTATTTAGACAAATCTAAGACAAG 57.418 33.333 9.81 3.88 45.93 3.16
3493 5960 9.529325 CATCCGTATTTAGACAAATCTAAGACA 57.471 33.333 9.81 0.00 45.93 3.41
3494 5961 9.530633 ACATCCGTATTTAGACAAATCTAAGAC 57.469 33.333 0.00 0.83 45.93 3.01
3501 5968 9.832445 ACTTGATACATCCGTATTTAGACAAAT 57.168 29.630 0.00 0.00 38.48 2.32
3502 5969 9.309516 GACTTGATACATCCGTATTTAGACAAA 57.690 33.333 0.00 0.00 38.48 2.83
3503 5970 8.471609 TGACTTGATACATCCGTATTTAGACAA 58.528 33.333 0.00 0.00 38.48 3.18
3504 5971 7.919091 GTGACTTGATACATCCGTATTTAGACA 59.081 37.037 0.00 0.00 38.48 3.41
3505 5972 7.919091 TGTGACTTGATACATCCGTATTTAGAC 59.081 37.037 0.00 0.00 38.48 2.59
3506 5973 8.002984 TGTGACTTGATACATCCGTATTTAGA 57.997 34.615 0.00 0.00 38.48 2.10
3507 5974 8.818141 ATGTGACTTGATACATCCGTATTTAG 57.182 34.615 0.00 0.00 38.48 1.85
3508 5975 9.607988 AAATGTGACTTGATACATCCGTATTTA 57.392 29.630 0.00 0.00 38.48 1.40
3509 5976 8.506168 AAATGTGACTTGATACATCCGTATTT 57.494 30.769 0.00 0.00 38.48 1.40
3510 5977 8.506168 AAAATGTGACTTGATACATCCGTATT 57.494 30.769 0.00 0.00 38.48 1.89
3511 5978 9.261180 CTAAAATGTGACTTGATACATCCGTAT 57.739 33.333 0.00 0.00 41.16 3.06
3512 5979 8.255206 ACTAAAATGTGACTTGATACATCCGTA 58.745 33.333 0.00 0.00 36.56 4.02
3513 5980 7.103641 ACTAAAATGTGACTTGATACATCCGT 58.896 34.615 0.00 0.00 36.56 4.69
3514 5981 7.539712 ACTAAAATGTGACTTGATACATCCG 57.460 36.000 0.00 0.00 36.56 4.18
3558 6025 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
3559 6026 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
3560 6027 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
3561 6028 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
3562 6029 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
3563 6030 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
3564 6031 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
3565 6032 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
3566 6033 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
3567 6034 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
3568 6035 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
3569 6036 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
3570 6037 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
3571 6038 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
3572 6039 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
3573 6040 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
3574 6041 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
3575 6042 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
3576 6043 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
3577 6044 1.838077 CTACTCCCTCCGTCCCAAAAT 59.162 52.381 0.00 0.00 0.00 1.82
3578 6045 1.272807 CTACTCCCTCCGTCCCAAAA 58.727 55.000 0.00 0.00 0.00 2.44
3579 6046 0.115745 ACTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
3580 6047 1.002069 TACTACTCCCTCCGTCCCAA 58.998 55.000 0.00 0.00 0.00 4.12
3581 6048 1.002069 TTACTACTCCCTCCGTCCCA 58.998 55.000 0.00 0.00 0.00 4.37
3582 6049 2.149973 TTTACTACTCCCTCCGTCCC 57.850 55.000 0.00 0.00 0.00 4.46
3583 6050 6.718912 AGTTATATTTACTACTCCCTCCGTCC 59.281 42.308 0.00 0.00 0.00 4.79
3584 6051 7.665145 AGAGTTATATTTACTACTCCCTCCGTC 59.335 40.741 0.00 0.00 38.17 4.79
3585 6052 7.525165 AGAGTTATATTTACTACTCCCTCCGT 58.475 38.462 0.00 0.00 38.17 4.69
3586 6053 7.999450 AGAGTTATATTTACTACTCCCTCCG 57.001 40.000 0.00 0.00 38.17 4.63
3685 6155 4.764679 TTCACTCATTTTGCTGCGTATT 57.235 36.364 0.00 0.00 0.00 1.89
3691 6161 6.492007 AGTGTAGATTCACTCATTTTGCTG 57.508 37.500 0.00 0.00 44.07 4.41
3767 6237 7.069578 ACTCTCTCCGTTTCTAAATATAAGCCA 59.930 37.037 0.00 0.00 0.00 4.75
3789 6259 0.324943 AGGCCGCAACAACATACTCT 59.675 50.000 0.00 0.00 0.00 3.24
3805 6275 2.164422 GGAGCATTTTACAGGTCAAGGC 59.836 50.000 0.00 0.00 34.11 4.35
4106 6696 2.094854 ACATCTTTCTGGTCGGTCGTAC 60.095 50.000 0.00 0.00 0.00 3.67
4220 7123 3.505386 TGGACAATGCCATTTTACTGGT 58.495 40.909 0.00 0.00 38.63 4.00
4286 7189 3.423154 ACTTGCTTAGCCGTGCGC 61.423 61.111 0.00 0.00 37.98 6.09
4326 7229 7.828508 ATCAGAATGCATGTGTGGTAATAAT 57.171 32.000 0.00 0.00 34.76 1.28
4473 7382 5.668471 TGAACACCATTCATTGCAAGAAAA 58.332 33.333 4.94 0.00 0.00 2.29
4475 7384 4.933505 TGAACACCATTCATTGCAAGAA 57.066 36.364 4.94 9.33 0.00 2.52
4476 7385 4.523558 TGATGAACACCATTCATTGCAAGA 59.476 37.500 4.94 0.00 39.08 3.02
4478 7387 4.868314 TGATGAACACCATTCATTGCAA 57.132 36.364 0.00 0.00 39.08 4.08
4480 7389 4.624024 CAGTTGATGAACACCATTCATTGC 59.376 41.667 3.79 0.00 39.08 3.56
4481 7390 4.624024 GCAGTTGATGAACACCATTCATTG 59.376 41.667 3.79 0.39 39.08 2.82
4482 7391 4.281435 TGCAGTTGATGAACACCATTCATT 59.719 37.500 3.79 0.00 39.08 2.57
4483 7392 3.827876 TGCAGTTGATGAACACCATTCAT 59.172 39.130 1.84 1.84 41.43 2.57
4484 7393 3.220940 TGCAGTTGATGAACACCATTCA 58.779 40.909 0.00 0.00 35.17 2.57
4485 7394 3.921119 TGCAGTTGATGAACACCATTC 57.079 42.857 0.00 0.00 35.17 2.67
4486 7395 3.553508 GCTTGCAGTTGATGAACACCATT 60.554 43.478 0.00 0.00 35.17 3.16
4487 7396 2.029649 GCTTGCAGTTGATGAACACCAT 60.030 45.455 0.00 0.00 38.43 3.55
4488 7397 1.337703 GCTTGCAGTTGATGAACACCA 59.662 47.619 0.00 0.00 34.17 4.17
4489 7398 1.610522 AGCTTGCAGTTGATGAACACC 59.389 47.619 0.00 0.00 34.17 4.16
4490 7399 2.291465 TCAGCTTGCAGTTGATGAACAC 59.709 45.455 0.00 0.00 30.30 3.32
4519 7428 0.678048 AATGAAACCTGGGAGCGCTC 60.678 55.000 29.38 29.38 0.00 5.03
4624 7533 6.736123 CATTGGCTTCTTCTATCAATGGAAG 58.264 40.000 9.20 9.20 44.01 3.46
4652 7561 7.985184 TCGCCTTTGTTCTATGTATTTCTGTAT 59.015 33.333 0.00 0.00 0.00 2.29
4676 7585 1.718361 CGACAACGTGTGATGCTTTCG 60.718 52.381 0.00 0.00 34.56 3.46
4694 7603 4.864916 GTGAATCACGTACTACTACCGA 57.135 45.455 0.00 0.00 0.00 4.69
4733 7642 3.691356 GCGCGCAACAAACAAGGC 61.691 61.111 29.10 0.00 0.00 4.35
4770 7679 2.836981 AGTTCCTCCCTGATGTCTTCTG 59.163 50.000 0.00 0.00 0.00 3.02
4795 7704 0.244450 ATTTGCATCCAACGGCACTG 59.756 50.000 0.00 0.00 40.23 3.66
4797 7706 0.737019 CCATTTGCATCCAACGGCAC 60.737 55.000 0.00 0.00 40.23 5.01
4830 7739 3.850273 GTCTAATCGTGGTGTCGTTACTG 59.150 47.826 0.00 0.00 0.00 2.74
4841 7750 3.684305 TGCATGTTCTTGTCTAATCGTGG 59.316 43.478 0.00 0.00 0.00 4.94
4850 7759 3.611113 GCAATGACATGCATGTTCTTGTC 59.389 43.478 33.01 26.48 45.70 3.18
5061 7971 3.435671 CAGGTTTGTTCAGAATACGGTCC 59.564 47.826 0.00 0.00 0.00 4.46
5067 7977 4.642437 TGTTGTGCAGGTTTGTTCAGAATA 59.358 37.500 0.00 0.00 0.00 1.75
5072 7982 2.441410 TCTGTTGTGCAGGTTTGTTCA 58.559 42.857 0.00 0.00 45.08 3.18
5129 8039 9.913310 TGAAGTTGGATATAATTATGTGTTGGA 57.087 29.630 8.28 0.00 0.00 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.