Multiple sequence alignment - TraesCS4D01G121700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G121700 chr4D 100.000 2408 0 0 1 2408 103237863 103235456 0.000000e+00 4447
1 TraesCS4D01G121700 chr4A 93.225 1594 60 21 843 2408 471929297 471930870 0.000000e+00 2302
2 TraesCS4D01G121700 chr4B 91.887 1516 62 24 905 2391 147369799 147368316 0.000000e+00 2061
3 TraesCS4D01G121700 chr4B 84.519 239 25 6 443 670 147370812 147370575 2.410000e-55 226
4 TraesCS4D01G121700 chr7D 98.413 441 6 1 1 441 145840030 145840469 0.000000e+00 774
5 TraesCS4D01G121700 chr7D 98.186 441 7 1 1 441 436867789 436868228 0.000000e+00 769
6 TraesCS4D01G121700 chr5D 97.964 442 8 1 1 441 345725514 345725955 0.000000e+00 765
7 TraesCS4D01G121700 chr5D 97.732 441 9 1 1 441 98801989 98802428 0.000000e+00 758
8 TraesCS4D01G121700 chr5D 97.732 441 9 1 1 441 494641335 494640896 0.000000e+00 758
9 TraesCS4D01G121700 chr5D 81.347 193 16 10 1183 1375 233819170 233818998 3.230000e-29 139
10 TraesCS4D01G121700 chr6D 97.315 447 10 1 1 447 355022629 355022185 0.000000e+00 758
11 TraesCS4D01G121700 chr3D 97.732 441 8 2 1 441 311721838 311722276 0.000000e+00 758
12 TraesCS4D01G121700 chr3D 84.390 205 29 1 480 681 577201401 577201605 5.250000e-47 198
13 TraesCS4D01G121700 chr1D 97.732 441 9 1 1 441 472428145 472427706 0.000000e+00 758
14 TraesCS4D01G121700 chr1D 84.332 217 31 2 480 695 68433525 68433739 2.430000e-50 209
15 TraesCS4D01G121700 chr2D 96.889 450 12 2 1 450 32537258 32537705 0.000000e+00 752
16 TraesCS4D01G121700 chr2D 84.483 174 25 2 523 695 187103576 187103748 1.140000e-38 171
17 TraesCS4D01G121700 chr6B 82.051 273 44 4 489 757 504887562 504887291 6.700000e-56 228
18 TraesCS4D01G121700 chr3A 84.878 205 28 1 480 681 712530442 712530646 1.130000e-48 204
19 TraesCS4D01G121700 chr5B 84.804 204 23 4 480 680 664982982 664982784 5.250000e-47 198
20 TraesCS4D01G121700 chr2A 78.716 296 45 10 489 769 122043705 122043413 5.290000e-42 182
21 TraesCS4D01G121700 chr2A 85.632 174 23 2 523 695 199724767 199724939 5.290000e-42 182
22 TraesCS4D01G121700 chr5A 81.579 190 15 8 1183 1372 320743454 320743623 3.230000e-29 139


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G121700 chr4D 103235456 103237863 2407 True 4447.0 4447 100.000 1 2408 1 chr4D.!!$R1 2407
1 TraesCS4D01G121700 chr4A 471929297 471930870 1573 False 2302.0 2302 93.225 843 2408 1 chr4A.!!$F1 1565
2 TraesCS4D01G121700 chr4B 147368316 147370812 2496 True 1143.5 2061 88.203 443 2391 2 chr4B.!!$R1 1948

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
35 36 0.035056 GGCTAGCACCCAAGACACAT 60.035 55.0 18.24 0.0 0.0 3.21 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1748 2370 0.537143 TTCTTGGGTGCGTGCAAGAT 60.537 50.0 2.99 0.0 34.22 2.4 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 2.328992 AATAGAGGGGTAGGGCTAGC 57.671 55.000 6.04 6.04 0.00 3.42
23 24 1.167943 ATAGAGGGGTAGGGCTAGCA 58.832 55.000 18.24 0.00 35.41 3.49
24 25 0.187851 TAGAGGGGTAGGGCTAGCAC 59.812 60.000 18.24 14.32 37.23 4.40
25 26 2.040779 AGGGGTAGGGCTAGCACC 60.041 66.667 14.92 13.86 37.67 5.01
33 34 4.303257 GGCTAGCACCCAAGACAC 57.697 61.111 18.24 0.00 0.00 3.67
34 35 1.374947 GGCTAGCACCCAAGACACA 59.625 57.895 18.24 0.00 0.00 3.72
35 36 0.035056 GGCTAGCACCCAAGACACAT 60.035 55.000 18.24 0.00 0.00 3.21
36 37 1.373570 GCTAGCACCCAAGACACATC 58.626 55.000 10.63 0.00 0.00 3.06
37 38 1.339055 GCTAGCACCCAAGACACATCA 60.339 52.381 10.63 0.00 0.00 3.07
38 39 2.875672 GCTAGCACCCAAGACACATCAA 60.876 50.000 10.63 0.00 0.00 2.57
39 40 1.901591 AGCACCCAAGACACATCAAG 58.098 50.000 0.00 0.00 0.00 3.02
40 41 1.421268 AGCACCCAAGACACATCAAGA 59.579 47.619 0.00 0.00 0.00 3.02
41 42 2.158623 AGCACCCAAGACACATCAAGAA 60.159 45.455 0.00 0.00 0.00 2.52
42 43 2.622942 GCACCCAAGACACATCAAGAAA 59.377 45.455 0.00 0.00 0.00 2.52
43 44 3.550842 GCACCCAAGACACATCAAGAAAC 60.551 47.826 0.00 0.00 0.00 2.78
44 45 3.631686 CACCCAAGACACATCAAGAAACA 59.368 43.478 0.00 0.00 0.00 2.83
45 46 3.632145 ACCCAAGACACATCAAGAAACAC 59.368 43.478 0.00 0.00 0.00 3.32
46 47 3.004734 CCCAAGACACATCAAGAAACACC 59.995 47.826 0.00 0.00 0.00 4.16
47 48 3.631686 CCAAGACACATCAAGAAACACCA 59.368 43.478 0.00 0.00 0.00 4.17
48 49 4.097741 CCAAGACACATCAAGAAACACCAA 59.902 41.667 0.00 0.00 0.00 3.67
49 50 5.276270 CAAGACACATCAAGAAACACCAAG 58.724 41.667 0.00 0.00 0.00 3.61
50 51 3.316308 AGACACATCAAGAAACACCAAGC 59.684 43.478 0.00 0.00 0.00 4.01
51 52 2.362077 ACACATCAAGAAACACCAAGCC 59.638 45.455 0.00 0.00 0.00 4.35
52 53 1.608590 ACATCAAGAAACACCAAGCCG 59.391 47.619 0.00 0.00 0.00 5.52
53 54 1.608590 CATCAAGAAACACCAAGCCGT 59.391 47.619 0.00 0.00 0.00 5.68
54 55 1.021202 TCAAGAAACACCAAGCCGTG 58.979 50.000 0.00 0.00 39.75 4.94
56 57 0.738389 AAGAAACACCAAGCCGTGTG 59.262 50.000 2.88 0.00 46.19 3.82
57 58 1.299089 GAAACACCAAGCCGTGTGC 60.299 57.895 2.88 0.00 46.19 4.57
58 59 2.677573 GAAACACCAAGCCGTGTGCC 62.678 60.000 2.88 0.00 46.19 5.01
76 77 3.003763 GGCAACCCCGTCTCCTCT 61.004 66.667 0.00 0.00 0.00 3.69
77 78 1.684734 GGCAACCCCGTCTCCTCTA 60.685 63.158 0.00 0.00 0.00 2.43
78 79 1.677637 GGCAACCCCGTCTCCTCTAG 61.678 65.000 0.00 0.00 0.00 2.43
79 80 0.971447 GCAACCCCGTCTCCTCTAGT 60.971 60.000 0.00 0.00 0.00 2.57
80 81 1.558233 CAACCCCGTCTCCTCTAGTT 58.442 55.000 0.00 0.00 0.00 2.24
81 82 1.900486 CAACCCCGTCTCCTCTAGTTT 59.100 52.381 0.00 0.00 0.00 2.66
82 83 3.094572 CAACCCCGTCTCCTCTAGTTTA 58.905 50.000 0.00 0.00 0.00 2.01
83 84 3.684408 ACCCCGTCTCCTCTAGTTTAT 57.316 47.619 0.00 0.00 0.00 1.40
84 85 3.564264 ACCCCGTCTCCTCTAGTTTATC 58.436 50.000 0.00 0.00 0.00 1.75
85 86 2.892215 CCCCGTCTCCTCTAGTTTATCC 59.108 54.545 0.00 0.00 0.00 2.59
86 87 3.436761 CCCCGTCTCCTCTAGTTTATCCT 60.437 52.174 0.00 0.00 0.00 3.24
87 88 3.822167 CCCGTCTCCTCTAGTTTATCCTC 59.178 52.174 0.00 0.00 0.00 3.71
88 89 3.822167 CCGTCTCCTCTAGTTTATCCTCC 59.178 52.174 0.00 0.00 0.00 4.30
89 90 3.499157 CGTCTCCTCTAGTTTATCCTCCG 59.501 52.174 0.00 0.00 0.00 4.63
90 91 4.463070 GTCTCCTCTAGTTTATCCTCCGT 58.537 47.826 0.00 0.00 0.00 4.69
91 92 4.516321 GTCTCCTCTAGTTTATCCTCCGTC 59.484 50.000 0.00 0.00 0.00 4.79
92 93 4.165565 TCTCCTCTAGTTTATCCTCCGTCA 59.834 45.833 0.00 0.00 0.00 4.35
93 94 5.063017 TCCTCTAGTTTATCCTCCGTCAT 57.937 43.478 0.00 0.00 0.00 3.06
94 95 6.044054 TCTCCTCTAGTTTATCCTCCGTCATA 59.956 42.308 0.00 0.00 0.00 2.15
95 96 6.239396 TCCTCTAGTTTATCCTCCGTCATAG 58.761 44.000 0.00 0.00 0.00 2.23
96 97 6.005198 CCTCTAGTTTATCCTCCGTCATAGT 58.995 44.000 0.00 0.00 0.00 2.12
97 98 6.490721 CCTCTAGTTTATCCTCCGTCATAGTT 59.509 42.308 0.00 0.00 0.00 2.24
98 99 7.014422 CCTCTAGTTTATCCTCCGTCATAGTTT 59.986 40.741 0.00 0.00 0.00 2.66
99 100 8.302515 TCTAGTTTATCCTCCGTCATAGTTTT 57.697 34.615 0.00 0.00 0.00 2.43
100 101 8.411683 TCTAGTTTATCCTCCGTCATAGTTTTC 58.588 37.037 0.00 0.00 0.00 2.29
101 102 6.040878 AGTTTATCCTCCGTCATAGTTTTCG 58.959 40.000 0.00 0.00 0.00 3.46
102 103 5.587388 TTATCCTCCGTCATAGTTTTCGT 57.413 39.130 0.00 0.00 0.00 3.85
103 104 6.698008 TTATCCTCCGTCATAGTTTTCGTA 57.302 37.500 0.00 0.00 0.00 3.43
104 105 4.627611 TCCTCCGTCATAGTTTTCGTAG 57.372 45.455 0.00 0.00 0.00 3.51
105 106 4.012374 TCCTCCGTCATAGTTTTCGTAGT 58.988 43.478 0.00 0.00 0.00 2.73
106 107 4.103357 CCTCCGTCATAGTTTTCGTAGTG 58.897 47.826 0.00 0.00 0.00 2.74
107 108 3.504863 TCCGTCATAGTTTTCGTAGTGC 58.495 45.455 0.00 0.00 0.00 4.40
108 109 3.192001 TCCGTCATAGTTTTCGTAGTGCT 59.808 43.478 0.00 0.00 0.00 4.40
109 110 3.924686 CCGTCATAGTTTTCGTAGTGCTT 59.075 43.478 0.00 0.00 0.00 3.91
110 111 5.097529 CCGTCATAGTTTTCGTAGTGCTTA 58.902 41.667 0.00 0.00 0.00 3.09
111 112 5.004156 CCGTCATAGTTTTCGTAGTGCTTAC 59.996 44.000 0.00 0.00 0.00 2.34
132 133 2.029838 CGAAGCCCTGCTAAGATTGT 57.970 50.000 0.00 0.00 38.25 2.71
133 134 2.359900 CGAAGCCCTGCTAAGATTGTT 58.640 47.619 0.00 0.00 38.25 2.83
134 135 2.352960 CGAAGCCCTGCTAAGATTGTTC 59.647 50.000 0.00 0.00 38.25 3.18
135 136 3.615155 GAAGCCCTGCTAAGATTGTTCT 58.385 45.455 0.00 0.00 38.25 3.01
136 137 3.728385 AGCCCTGCTAAGATTGTTCTT 57.272 42.857 0.00 0.00 44.44 2.52
137 138 3.615155 AGCCCTGCTAAGATTGTTCTTC 58.385 45.455 0.00 0.00 41.36 2.87
138 139 3.009473 AGCCCTGCTAAGATTGTTCTTCA 59.991 43.478 0.00 0.00 41.36 3.02
139 140 3.127721 GCCCTGCTAAGATTGTTCTTCAC 59.872 47.826 0.00 0.00 41.36 3.18
140 141 3.691609 CCCTGCTAAGATTGTTCTTCACC 59.308 47.826 0.00 0.00 41.36 4.02
141 142 4.326826 CCTGCTAAGATTGTTCTTCACCA 58.673 43.478 0.00 0.00 41.36 4.17
142 143 4.761739 CCTGCTAAGATTGTTCTTCACCAA 59.238 41.667 0.00 0.00 41.36 3.67
143 144 5.335191 CCTGCTAAGATTGTTCTTCACCAAC 60.335 44.000 0.00 0.00 41.36 3.77
144 145 5.129634 TGCTAAGATTGTTCTTCACCAACA 58.870 37.500 0.00 0.00 41.36 3.33
145 146 5.008613 TGCTAAGATTGTTCTTCACCAACAC 59.991 40.000 0.00 0.00 41.36 3.32
146 147 4.918810 AAGATTGTTCTTCACCAACACC 57.081 40.909 0.00 0.00 37.69 4.16
147 148 3.897239 AGATTGTTCTTCACCAACACCA 58.103 40.909 0.00 0.00 33.42 4.17
148 149 4.473444 AGATTGTTCTTCACCAACACCAT 58.527 39.130 0.00 0.00 33.42 3.55
149 150 4.520492 AGATTGTTCTTCACCAACACCATC 59.480 41.667 0.00 0.00 33.42 3.51
150 151 3.289407 TGTTCTTCACCAACACCATCA 57.711 42.857 0.00 0.00 0.00 3.07
151 152 2.948979 TGTTCTTCACCAACACCATCAC 59.051 45.455 0.00 0.00 0.00 3.06
152 153 2.270352 TCTTCACCAACACCATCACC 57.730 50.000 0.00 0.00 0.00 4.02
153 154 1.492599 TCTTCACCAACACCATCACCA 59.507 47.619 0.00 0.00 0.00 4.17
154 155 1.608590 CTTCACCAACACCATCACCAC 59.391 52.381 0.00 0.00 0.00 4.16
155 156 0.533978 TCACCAACACCATCACCACG 60.534 55.000 0.00 0.00 0.00 4.94
156 157 1.896660 ACCAACACCATCACCACGC 60.897 57.895 0.00 0.00 0.00 5.34
157 158 2.625823 CCAACACCATCACCACGCC 61.626 63.158 0.00 0.00 0.00 5.68
158 159 2.668212 AACACCATCACCACGCCG 60.668 61.111 0.00 0.00 0.00 6.46
159 160 3.469863 AACACCATCACCACGCCGT 62.470 57.895 0.00 0.00 0.00 5.68
160 161 3.118454 CACCATCACCACGCCGTC 61.118 66.667 0.00 0.00 0.00 4.79
161 162 4.735132 ACCATCACCACGCCGTCG 62.735 66.667 0.00 0.00 42.43 5.12
175 176 3.112709 GTCGTGCTGCCGGAACTC 61.113 66.667 5.05 0.00 0.00 3.01
176 177 3.611674 TCGTGCTGCCGGAACTCA 61.612 61.111 5.05 0.00 0.00 3.41
177 178 2.434884 CGTGCTGCCGGAACTCAT 60.435 61.111 5.05 0.00 0.00 2.90
178 179 2.456119 CGTGCTGCCGGAACTCATC 61.456 63.158 5.05 0.00 0.00 2.92
179 180 1.078848 GTGCTGCCGGAACTCATCT 60.079 57.895 5.05 0.00 0.00 2.90
180 181 0.175760 GTGCTGCCGGAACTCATCTA 59.824 55.000 5.05 0.00 0.00 1.98
181 182 0.175760 TGCTGCCGGAACTCATCTAC 59.824 55.000 5.05 0.00 0.00 2.59
182 183 0.461961 GCTGCCGGAACTCATCTACT 59.538 55.000 5.05 0.00 0.00 2.57
183 184 1.681793 GCTGCCGGAACTCATCTACTA 59.318 52.381 5.05 0.00 0.00 1.82
184 185 2.544069 GCTGCCGGAACTCATCTACTAC 60.544 54.545 5.05 0.00 0.00 2.73
185 186 2.952978 CTGCCGGAACTCATCTACTACT 59.047 50.000 5.05 0.00 0.00 2.57
186 187 3.362706 TGCCGGAACTCATCTACTACTT 58.637 45.455 5.05 0.00 0.00 2.24
187 188 3.380637 TGCCGGAACTCATCTACTACTTC 59.619 47.826 5.05 0.00 0.00 3.01
188 189 3.548415 GCCGGAACTCATCTACTACTTCG 60.548 52.174 5.05 0.00 0.00 3.79
189 190 3.548415 CCGGAACTCATCTACTACTTCGC 60.548 52.174 0.00 0.00 0.00 4.70
190 191 3.548415 CGGAACTCATCTACTACTTCGCC 60.548 52.174 0.00 0.00 0.00 5.54
191 192 3.243468 GGAACTCATCTACTACTTCGCCC 60.243 52.174 0.00 0.00 0.00 6.13
192 193 2.308690 ACTCATCTACTACTTCGCCCC 58.691 52.381 0.00 0.00 0.00 5.80
193 194 2.091775 ACTCATCTACTACTTCGCCCCT 60.092 50.000 0.00 0.00 0.00 4.79
194 195 2.554893 CTCATCTACTACTTCGCCCCTC 59.445 54.545 0.00 0.00 0.00 4.30
195 196 2.175069 TCATCTACTACTTCGCCCCTCT 59.825 50.000 0.00 0.00 0.00 3.69
196 197 2.822707 TCTACTACTTCGCCCCTCTT 57.177 50.000 0.00 0.00 0.00 2.85
197 198 2.376109 TCTACTACTTCGCCCCTCTTG 58.624 52.381 0.00 0.00 0.00 3.02
198 199 0.822164 TACTACTTCGCCCCTCTTGC 59.178 55.000 0.00 0.00 0.00 4.01
199 200 0.905337 ACTACTTCGCCCCTCTTGCT 60.905 55.000 0.00 0.00 0.00 3.91
200 201 0.460987 CTACTTCGCCCCTCTTGCTG 60.461 60.000 0.00 0.00 0.00 4.41
201 202 1.899437 TACTTCGCCCCTCTTGCTGG 61.899 60.000 0.00 0.00 0.00 4.85
202 203 2.927856 TTCGCCCCTCTTGCTGGA 60.928 61.111 0.00 0.00 0.00 3.86
203 204 2.262774 CTTCGCCCCTCTTGCTGGAT 62.263 60.000 0.00 0.00 0.00 3.41
204 205 2.203126 CGCCCCTCTTGCTGGATC 60.203 66.667 0.00 0.00 0.00 3.36
205 206 2.203126 GCCCCTCTTGCTGGATCG 60.203 66.667 0.00 0.00 0.00 3.69
206 207 2.735772 GCCCCTCTTGCTGGATCGA 61.736 63.158 0.00 0.00 0.00 3.59
207 208 1.445095 CCCCTCTTGCTGGATCGAG 59.555 63.158 0.00 0.00 0.00 4.04
208 209 1.045350 CCCCTCTTGCTGGATCGAGA 61.045 60.000 9.17 0.00 0.00 4.04
209 210 0.826715 CCCTCTTGCTGGATCGAGAA 59.173 55.000 9.17 0.00 0.00 2.87
210 211 1.202510 CCCTCTTGCTGGATCGAGAAG 60.203 57.143 9.17 9.21 0.00 2.85
211 212 1.202510 CCTCTTGCTGGATCGAGAAGG 60.203 57.143 9.17 0.00 0.00 3.46
212 213 0.176680 TCTTGCTGGATCGAGAAGGC 59.823 55.000 9.17 0.00 0.00 4.35
213 214 1.150567 CTTGCTGGATCGAGAAGGCG 61.151 60.000 9.17 0.00 0.00 5.52
214 215 1.604147 TTGCTGGATCGAGAAGGCGA 61.604 55.000 9.17 0.00 45.22 5.54
215 216 1.299773 GCTGGATCGAGAAGGCGAG 60.300 63.158 9.17 0.00 44.26 5.03
216 217 1.361993 CTGGATCGAGAAGGCGAGG 59.638 63.158 0.00 0.00 44.26 4.63
217 218 1.076995 TGGATCGAGAAGGCGAGGA 60.077 57.895 0.00 0.00 44.26 3.71
218 219 1.360911 GGATCGAGAAGGCGAGGAC 59.639 63.158 0.00 0.00 44.26 3.85
219 220 1.009449 GATCGAGAAGGCGAGGACG 60.009 63.158 0.00 0.00 44.26 4.79
220 221 1.716826 GATCGAGAAGGCGAGGACGT 61.717 60.000 0.00 0.00 44.26 4.34
221 222 1.716826 ATCGAGAAGGCGAGGACGTC 61.717 60.000 7.13 7.13 44.26 4.34
227 228 4.477975 GGCGAGGACGTCACCGAG 62.478 72.222 25.81 11.00 44.03 4.63
229 230 4.477975 CGAGGACGTCACCGAGCC 62.478 72.222 18.91 0.00 37.88 4.70
230 231 4.477975 GAGGACGTCACCGAGCCG 62.478 72.222 18.91 0.00 37.22 5.52
232 233 4.047059 GGACGTCACCGAGCCGAA 62.047 66.667 18.91 0.00 37.88 4.30
233 234 2.804090 GACGTCACCGAGCCGAAC 60.804 66.667 11.55 0.00 37.88 3.95
234 235 4.695231 ACGTCACCGAGCCGAACG 62.695 66.667 11.96 11.96 37.88 3.95
235 236 4.695231 CGTCACCGAGCCGAACGT 62.695 66.667 0.00 0.00 35.63 3.99
236 237 3.103911 GTCACCGAGCCGAACGTG 61.104 66.667 0.00 0.00 0.00 4.49
237 238 3.598715 TCACCGAGCCGAACGTGT 61.599 61.111 0.00 0.00 0.00 4.49
238 239 3.403057 CACCGAGCCGAACGTGTG 61.403 66.667 0.00 0.00 0.00 3.82
241 242 3.767230 CGAGCCGAACGTGTGCAG 61.767 66.667 6.93 0.00 0.00 4.41
242 243 2.355837 GAGCCGAACGTGTGCAGA 60.356 61.111 6.93 0.00 0.00 4.26
243 244 1.954146 GAGCCGAACGTGTGCAGAA 60.954 57.895 6.93 0.00 0.00 3.02
244 245 2.159272 GAGCCGAACGTGTGCAGAAC 62.159 60.000 6.93 0.00 0.00 3.01
245 246 2.244651 GCCGAACGTGTGCAGAACT 61.245 57.895 0.00 0.00 0.00 3.01
246 247 1.853319 CCGAACGTGTGCAGAACTC 59.147 57.895 0.00 0.00 0.00 3.01
250 251 3.848142 CGTGTGCAGAACTCGGAG 58.152 61.111 2.83 2.83 41.05 4.63
251 252 1.734477 CGTGTGCAGAACTCGGAGG 60.734 63.158 10.23 0.00 41.05 4.30
252 253 1.367840 GTGTGCAGAACTCGGAGGT 59.632 57.895 10.23 1.51 0.00 3.85
253 254 0.946221 GTGTGCAGAACTCGGAGGTG 60.946 60.000 10.23 5.07 0.00 4.00
254 255 2.029844 GTGCAGAACTCGGAGGTGC 61.030 63.158 17.45 17.45 34.62 5.01
255 256 2.435059 GCAGAACTCGGAGGTGCC 60.435 66.667 10.23 0.00 0.00 5.01
264 265 3.423154 GGAGGTGCCGTGCTTTCG 61.423 66.667 0.00 0.00 0.00 3.46
272 273 2.159181 CCGTGCTTTCGGTACTTGG 58.841 57.895 7.24 0.00 44.77 3.61
273 274 0.320073 CCGTGCTTTCGGTACTTGGA 60.320 55.000 7.24 0.00 44.77 3.53
274 275 1.674817 CCGTGCTTTCGGTACTTGGAT 60.675 52.381 7.24 0.00 44.77 3.41
275 276 1.659098 CGTGCTTTCGGTACTTGGATC 59.341 52.381 0.00 0.00 0.00 3.36
276 277 1.659098 GTGCTTTCGGTACTTGGATCG 59.341 52.381 0.00 0.00 0.00 3.69
277 278 1.287425 GCTTTCGGTACTTGGATCGG 58.713 55.000 0.00 0.00 0.00 4.18
278 279 1.405121 GCTTTCGGTACTTGGATCGGT 60.405 52.381 0.00 0.00 0.00 4.69
279 280 2.537401 CTTTCGGTACTTGGATCGGTC 58.463 52.381 0.00 0.00 0.00 4.79
280 281 0.452987 TTCGGTACTTGGATCGGTCG 59.547 55.000 0.00 0.00 0.00 4.79
281 282 1.065273 CGGTACTTGGATCGGTCGG 59.935 63.158 0.00 0.00 0.00 4.79
282 283 1.378882 CGGTACTTGGATCGGTCGGA 61.379 60.000 0.00 0.00 0.00 4.55
283 284 1.038280 GGTACTTGGATCGGTCGGAT 58.962 55.000 0.00 0.00 38.35 4.18
290 291 3.165559 GATCGGTCGGATCGTGAAG 57.834 57.895 10.85 0.00 42.02 3.02
291 292 0.661552 GATCGGTCGGATCGTGAAGA 59.338 55.000 10.85 0.00 42.02 2.87
292 293 0.381089 ATCGGTCGGATCGTGAAGAC 59.619 55.000 10.85 0.00 0.00 3.01
294 295 1.505353 GGTCGGATCGTGAAGACGT 59.495 57.895 0.00 0.00 46.20 4.34
295 296 0.729116 GGTCGGATCGTGAAGACGTA 59.271 55.000 0.00 0.00 46.20 3.57
296 297 1.530646 GGTCGGATCGTGAAGACGTAC 60.531 57.143 0.00 0.00 46.20 3.67
297 298 0.371301 TCGGATCGTGAAGACGTACG 59.629 55.000 15.01 15.01 46.20 3.67
303 304 2.403259 TCGTGAAGACGTACGACTACA 58.597 47.619 24.41 13.28 46.20 2.74
304 305 2.995939 TCGTGAAGACGTACGACTACAT 59.004 45.455 24.41 6.17 46.20 2.29
305 306 3.061295 TCGTGAAGACGTACGACTACATC 59.939 47.826 24.41 15.62 46.20 3.06
306 307 3.181527 CGTGAAGACGTACGACTACATCA 60.182 47.826 24.41 18.00 42.54 3.07
307 308 4.667415 CGTGAAGACGTACGACTACATCAA 60.667 45.833 24.41 4.49 42.54 2.57
308 309 4.552660 GTGAAGACGTACGACTACATCAAC 59.447 45.833 24.41 11.90 0.00 3.18
309 310 3.754188 AGACGTACGACTACATCAACC 57.246 47.619 24.41 0.00 0.00 3.77
310 311 2.094894 AGACGTACGACTACATCAACCG 59.905 50.000 24.41 0.00 0.00 4.44
311 312 1.186030 CGTACGACTACATCAACCGC 58.814 55.000 10.44 0.00 0.00 5.68
312 313 1.186030 GTACGACTACATCAACCGCG 58.814 55.000 0.00 0.00 0.00 6.46
313 314 0.804364 TACGACTACATCAACCGCGT 59.196 50.000 4.92 0.00 0.00 6.01
314 315 0.038892 ACGACTACATCAACCGCGTT 60.039 50.000 4.92 0.00 0.00 4.84
315 316 0.365523 CGACTACATCAACCGCGTTG 59.634 55.000 4.92 10.14 43.99 4.10
330 331 2.555220 CGTTGATATAACGCTTCCGC 57.445 50.000 0.00 0.00 36.82 5.54
331 332 2.124903 CGTTGATATAACGCTTCCGCT 58.875 47.619 0.00 0.00 36.82 5.52
332 333 2.538449 CGTTGATATAACGCTTCCGCTT 59.462 45.455 0.00 0.00 36.82 4.68
333 334 3.732219 CGTTGATATAACGCTTCCGCTTA 59.268 43.478 0.00 0.00 36.82 3.09
334 335 4.374707 CGTTGATATAACGCTTCCGCTTAC 60.375 45.833 0.00 0.00 36.82 2.34
335 336 3.302555 TGATATAACGCTTCCGCTTACG 58.697 45.455 0.00 0.00 38.22 3.18
346 347 3.867723 CGCTTACGGTCTATGAGGG 57.132 57.895 0.00 0.00 34.97 4.30
347 348 1.030457 CGCTTACGGTCTATGAGGGT 58.970 55.000 0.00 0.00 34.97 4.34
348 349 2.224606 CGCTTACGGTCTATGAGGGTA 58.775 52.381 0.00 0.00 34.97 3.69
349 350 2.031333 CGCTTACGGTCTATGAGGGTAC 60.031 54.545 0.00 0.00 34.97 3.34
350 351 2.031333 GCTTACGGTCTATGAGGGTACG 60.031 54.545 0.00 0.00 0.00 3.67
351 352 3.209410 CTTACGGTCTATGAGGGTACGT 58.791 50.000 0.00 0.00 36.93 3.57
352 353 4.380531 CTTACGGTCTATGAGGGTACGTA 58.619 47.826 0.00 0.00 34.69 3.57
353 354 2.843701 ACGGTCTATGAGGGTACGTAG 58.156 52.381 0.00 0.00 0.00 3.51
354 355 2.435805 ACGGTCTATGAGGGTACGTAGA 59.564 50.000 0.00 0.00 36.45 2.59
355 356 3.072184 ACGGTCTATGAGGGTACGTAGAT 59.928 47.826 0.00 0.00 39.52 1.98
356 357 4.284490 ACGGTCTATGAGGGTACGTAGATA 59.716 45.833 0.00 0.00 39.52 1.98
357 358 5.221722 ACGGTCTATGAGGGTACGTAGATAA 60.222 44.000 0.00 0.00 39.52 1.75
358 359 5.121454 CGGTCTATGAGGGTACGTAGATAAC 59.879 48.000 0.00 0.00 39.52 1.89
359 360 6.000219 GGTCTATGAGGGTACGTAGATAACA 59.000 44.000 0.00 0.00 39.52 2.41
360 361 6.072783 GGTCTATGAGGGTACGTAGATAACAC 60.073 46.154 0.00 0.00 39.52 3.32
361 362 6.709846 GTCTATGAGGGTACGTAGATAACACT 59.290 42.308 0.00 0.00 39.52 3.55
362 363 6.933521 TCTATGAGGGTACGTAGATAACACTC 59.066 42.308 10.16 10.16 42.75 3.51
363 364 5.108187 TGAGGGTACGTAGATAACACTCT 57.892 43.478 16.43 2.04 42.85 3.24
364 365 5.121811 TGAGGGTACGTAGATAACACTCTC 58.878 45.833 16.43 11.25 42.85 3.20
365 366 4.459330 AGGGTACGTAGATAACACTCTCC 58.541 47.826 0.00 0.00 0.00 3.71
366 367 3.567585 GGGTACGTAGATAACACTCTCCC 59.432 52.174 0.00 0.00 0.00 4.30
367 368 3.567585 GGTACGTAGATAACACTCTCCCC 59.432 52.174 0.00 0.00 0.00 4.81
368 369 3.666345 ACGTAGATAACACTCTCCCCT 57.334 47.619 0.00 0.00 0.00 4.79
369 370 3.553904 ACGTAGATAACACTCTCCCCTC 58.446 50.000 0.00 0.00 0.00 4.30
370 371 3.202595 ACGTAGATAACACTCTCCCCTCT 59.797 47.826 0.00 0.00 0.00 3.69
371 372 3.816523 CGTAGATAACACTCTCCCCTCTC 59.183 52.174 0.00 0.00 0.00 3.20
372 373 2.938838 AGATAACACTCTCCCCTCTCG 58.061 52.381 0.00 0.00 0.00 4.04
373 374 2.242708 AGATAACACTCTCCCCTCTCGT 59.757 50.000 0.00 0.00 0.00 4.18
374 375 2.599408 TAACACTCTCCCCTCTCGTT 57.401 50.000 0.00 0.00 0.00 3.85
375 376 0.969894 AACACTCTCCCCTCTCGTTG 59.030 55.000 0.00 0.00 0.00 4.10
376 377 1.216710 CACTCTCCCCTCTCGTTGC 59.783 63.158 0.00 0.00 0.00 4.17
377 378 1.077625 ACTCTCCCCTCTCGTTGCT 59.922 57.895 0.00 0.00 0.00 3.91
378 379 0.331954 ACTCTCCCCTCTCGTTGCTA 59.668 55.000 0.00 0.00 0.00 3.49
379 380 1.063567 ACTCTCCCCTCTCGTTGCTAT 60.064 52.381 0.00 0.00 0.00 2.97
380 381 1.339610 CTCTCCCCTCTCGTTGCTATG 59.660 57.143 0.00 0.00 0.00 2.23
381 382 0.249657 CTCCCCTCTCGTTGCTATGC 60.250 60.000 0.00 0.00 0.00 3.14
382 383 0.975556 TCCCCTCTCGTTGCTATGCA 60.976 55.000 0.00 0.00 36.47 3.96
383 384 0.107456 CCCCTCTCGTTGCTATGCAT 59.893 55.000 3.79 3.79 38.76 3.96
384 385 1.506493 CCCTCTCGTTGCTATGCATC 58.494 55.000 0.19 0.00 38.76 3.91
385 386 1.202568 CCCTCTCGTTGCTATGCATCA 60.203 52.381 0.19 0.00 38.76 3.07
386 387 1.863454 CCTCTCGTTGCTATGCATCAC 59.137 52.381 0.19 0.00 38.76 3.06
387 388 1.863454 CTCTCGTTGCTATGCATCACC 59.137 52.381 0.19 0.00 38.76 4.02
388 389 1.206849 TCTCGTTGCTATGCATCACCA 59.793 47.619 0.19 0.00 38.76 4.17
389 390 2.158914 TCTCGTTGCTATGCATCACCAT 60.159 45.455 0.19 0.00 38.76 3.55
390 391 1.941975 TCGTTGCTATGCATCACCATG 59.058 47.619 0.19 0.00 38.76 3.66
391 392 1.941975 CGTTGCTATGCATCACCATGA 59.058 47.619 0.19 0.00 38.76 3.07
392 393 2.551032 CGTTGCTATGCATCACCATGAT 59.449 45.455 0.19 0.00 38.76 2.45
393 394 3.364664 CGTTGCTATGCATCACCATGATC 60.365 47.826 0.19 0.00 38.76 2.92
394 395 3.782656 TGCTATGCATCACCATGATCT 57.217 42.857 0.19 0.00 34.28 2.75
395 396 4.094830 TGCTATGCATCACCATGATCTT 57.905 40.909 0.19 0.00 34.28 2.40
396 397 3.818773 TGCTATGCATCACCATGATCTTG 59.181 43.478 0.19 1.60 34.28 3.02
397 398 3.366070 GCTATGCATCACCATGATCTTGC 60.366 47.826 0.19 0.00 34.28 4.01
398 399 1.018910 TGCATCACCATGATCTTGCG 58.981 50.000 3.07 0.30 34.28 4.85
399 400 1.019673 GCATCACCATGATCTTGCGT 58.980 50.000 3.07 0.87 34.28 5.24
400 401 1.268386 GCATCACCATGATCTTGCGTG 60.268 52.381 17.02 17.02 34.28 5.34
401 402 2.011947 CATCACCATGATCTTGCGTGT 58.988 47.619 19.89 6.63 34.28 4.49
402 403 1.441738 TCACCATGATCTTGCGTGTG 58.558 50.000 19.89 14.96 0.00 3.82
403 404 0.179181 CACCATGATCTTGCGTGTGC 60.179 55.000 15.81 0.00 43.20 4.57
411 412 1.405526 ATCTTGCGTGTGCGTAGGATT 60.406 47.619 0.00 0.00 44.18 3.01
412 413 2.935238 ATCTTGCGTGTGCGTAGGATTT 60.935 45.455 0.00 0.00 44.18 2.17
413 414 4.419949 ATCTTGCGTGTGCGTAGGATTTT 61.420 43.478 0.00 0.00 44.18 1.82
414 415 5.865159 ATCTTGCGTGTGCGTAGGATTTTT 61.865 41.667 0.00 0.00 44.18 1.94
437 438 6.956202 TTTTTGAAATTACTACGTTCCCCA 57.044 33.333 0.00 0.00 0.00 4.96
438 439 6.956202 TTTTGAAATTACTACGTTCCCCAA 57.044 33.333 0.00 0.00 0.00 4.12
439 440 5.945466 TTGAAATTACTACGTTCCCCAAC 57.055 39.130 0.00 0.00 0.00 3.77
440 441 4.970711 TGAAATTACTACGTTCCCCAACA 58.029 39.130 0.00 0.00 32.14 3.33
441 442 5.562635 TGAAATTACTACGTTCCCCAACAT 58.437 37.500 0.00 0.00 32.14 2.71
442 443 6.709281 TGAAATTACTACGTTCCCCAACATA 58.291 36.000 0.00 0.00 32.14 2.29
443 444 6.819649 TGAAATTACTACGTTCCCCAACATAG 59.180 38.462 0.00 0.00 34.95 2.23
444 445 6.549433 AATTACTACGTTCCCCAACATAGA 57.451 37.500 0.00 0.00 32.93 1.98
445 446 5.587388 TTACTACGTTCCCCAACATAGAG 57.413 43.478 0.00 0.00 32.93 2.43
446 447 3.705051 ACTACGTTCCCCAACATAGAGA 58.295 45.455 0.00 0.00 32.93 3.10
447 448 4.091549 ACTACGTTCCCCAACATAGAGAA 58.908 43.478 0.00 0.00 32.93 2.87
448 449 3.329929 ACGTTCCCCAACATAGAGAAC 57.670 47.619 0.00 0.00 34.78 3.01
456 457 4.455877 CCCCAACATAGAGAACAAGTTCAC 59.544 45.833 14.69 8.74 41.84 3.18
463 464 2.076863 GAGAACAAGTTCACATCCCGG 58.923 52.381 14.69 0.00 41.84 5.73
466 467 2.649531 ACAAGTTCACATCCCGGAAA 57.350 45.000 0.73 0.00 0.00 3.13
469 470 3.895041 ACAAGTTCACATCCCGGAAAATT 59.105 39.130 0.73 0.00 0.00 1.82
480 481 5.730296 TCCCGGAAAATTAAGATGCAAAA 57.270 34.783 0.73 0.00 0.00 2.44
483 484 5.874261 CCCGGAAAATTAAGATGCAAAACAT 59.126 36.000 0.73 0.00 43.54 2.71
484 485 6.371271 CCCGGAAAATTAAGATGCAAAACATT 59.629 34.615 0.73 0.00 39.84 2.71
509 521 3.747010 GCAGATGCATCAGAATCTTCGAT 59.253 43.478 27.81 0.00 38.12 3.59
515 527 8.041919 AGATGCATCAGAATCTTCGATATCATT 58.958 33.333 27.81 0.00 36.72 2.57
517 529 8.699283 TGCATCAGAATCTTCGATATCATTAG 57.301 34.615 3.12 0.00 0.00 1.73
520 532 9.299963 CATCAGAATCTTCGATATCATTAGGTC 57.700 37.037 3.12 0.00 0.00 3.85
523 535 7.543868 CAGAATCTTCGATATCATTAGGTCCAC 59.456 40.741 3.12 0.00 0.00 4.02
526 538 2.095415 TCGATATCATTAGGTCCACGCG 60.095 50.000 3.53 3.53 0.00 6.01
550 562 5.798934 GCAGCTACTCAATGATTTTGTGAAG 59.201 40.000 0.00 0.00 0.00 3.02
551 563 6.569226 GCAGCTACTCAATGATTTTGTGAAGT 60.569 38.462 0.00 0.00 0.00 3.01
565 577 8.732746 ATTTTGTGAAGTATATGTGGACCTAC 57.267 34.615 0.00 0.00 0.00 3.18
570 582 6.706270 GTGAAGTATATGTGGACCTACAATGG 59.294 42.308 0.00 0.00 33.69 3.16
575 587 4.380843 ATGTGGACCTACAATGGAAACA 57.619 40.909 0.00 0.00 37.25 2.83
605 617 6.959361 ACTAATGTTTGAGTTGTGCACTTAG 58.041 36.000 19.41 14.54 35.01 2.18
695 874 6.923508 ACGTGTATGATGTAGTGTATGGATTG 59.076 38.462 0.00 0.00 0.00 2.67
697 876 7.441836 GTGTATGATGTAGTGTATGGATTGGA 58.558 38.462 0.00 0.00 0.00 3.53
698 877 7.600375 GTGTATGATGTAGTGTATGGATTGGAG 59.400 40.741 0.00 0.00 0.00 3.86
699 878 7.508977 TGTATGATGTAGTGTATGGATTGGAGA 59.491 37.037 0.00 0.00 0.00 3.71
701 880 5.899547 TGATGTAGTGTATGGATTGGAGAGT 59.100 40.000 0.00 0.00 0.00 3.24
702 881 5.854010 TGTAGTGTATGGATTGGAGAGTC 57.146 43.478 0.00 0.00 0.00 3.36
703 882 4.649674 TGTAGTGTATGGATTGGAGAGTCC 59.350 45.833 0.00 0.00 36.96 3.85
704 883 3.724478 AGTGTATGGATTGGAGAGTCCA 58.276 45.455 0.00 0.00 46.61 4.02
729 920 3.895232 AGATATATGGATGTCGGGCAC 57.105 47.619 0.00 0.00 0.00 5.01
739 930 3.770040 TCGGGCACGAGACATGGG 61.770 66.667 7.15 0.00 45.59 4.00
740 931 3.770040 CGGGCACGAGACATGGGA 61.770 66.667 0.00 0.00 44.60 4.37
760 951 4.143333 CCGTCCGGATGCGTCCTT 62.143 66.667 22.53 0.00 42.73 3.36
763 954 3.833645 TCCGGATGCGTCCTTCGG 61.834 66.667 22.53 17.89 42.73 4.30
768 959 4.373116 ATGCGTCCTTCGGCGTGT 62.373 61.111 6.85 0.00 40.26 4.49
816 1007 1.677052 GATCGTATAGGAGGCCGGATC 59.323 57.143 5.05 1.05 0.00 3.36
818 1009 1.075050 TCGTATAGGAGGCCGGATCTT 59.925 52.381 5.05 0.39 0.00 2.40
821 1012 2.103153 ATAGGAGGCCGGATCTTTCA 57.897 50.000 5.05 0.00 0.00 2.69
822 1013 1.874129 TAGGAGGCCGGATCTTTCAA 58.126 50.000 5.05 0.00 0.00 2.69
823 1014 0.543749 AGGAGGCCGGATCTTTCAAG 59.456 55.000 5.05 0.00 0.00 3.02
825 1016 1.485066 GGAGGCCGGATCTTTCAAGTA 59.515 52.381 5.05 0.00 0.00 2.24
826 1017 2.552031 GAGGCCGGATCTTTCAAGTAC 58.448 52.381 5.05 0.00 0.00 2.73
827 1018 1.134788 AGGCCGGATCTTTCAAGTACG 60.135 52.381 5.05 0.00 0.00 3.67
829 1020 1.287425 CCGGATCTTTCAAGTACGGC 58.713 55.000 0.00 0.00 33.68 5.68
830 1021 1.134788 CCGGATCTTTCAAGTACGGCT 60.135 52.381 0.00 0.00 33.68 5.52
831 1022 1.927174 CGGATCTTTCAAGTACGGCTG 59.073 52.381 0.00 0.00 0.00 4.85
832 1023 2.674177 CGGATCTTTCAAGTACGGCTGT 60.674 50.000 2.42 2.42 0.00 4.40
833 1024 3.428452 CGGATCTTTCAAGTACGGCTGTA 60.428 47.826 0.00 0.00 0.00 2.74
834 1025 4.694339 GGATCTTTCAAGTACGGCTGTAT 58.306 43.478 9.01 0.00 32.11 2.29
835 1026 4.508124 GGATCTTTCAAGTACGGCTGTATG 59.492 45.833 9.01 4.26 32.11 2.39
836 1027 4.794278 TCTTTCAAGTACGGCTGTATGA 57.206 40.909 9.01 6.79 32.11 2.15
837 1028 5.339008 TCTTTCAAGTACGGCTGTATGAT 57.661 39.130 9.01 0.00 32.11 2.45
896 1090 0.764369 TGGAGTTGCTGTCCAGTCCT 60.764 55.000 0.00 0.00 39.28 3.85
897 1091 0.321122 GGAGTTGCTGTCCAGTCCTG 60.321 60.000 0.00 0.00 33.84 3.86
930 1521 2.233922 GTCACTTGGCTAGTTGGCTAGA 59.766 50.000 14.93 0.00 45.77 2.43
964 1556 3.828451 TGCAGCTTGCTTATTTTCCTCTT 59.172 39.130 9.12 0.00 45.31 2.85
975 1568 6.127869 GCTTATTTTCCTCTTCTTCCCAGTTC 60.128 42.308 0.00 0.00 0.00 3.01
1432 2034 2.404186 CGATCACCCTCGTCACCGA 61.404 63.158 0.00 0.00 41.73 4.69
1436 2038 0.683179 TCACCCTCGTCACCGATCAT 60.683 55.000 0.00 0.00 43.27 2.45
1439 2041 1.109920 CCCTCGTCACCGATCATCCT 61.110 60.000 0.00 0.00 43.27 3.24
1440 2042 0.312416 CCTCGTCACCGATCATCCTC 59.688 60.000 0.00 0.00 43.27 3.71
1441 2043 1.025041 CTCGTCACCGATCATCCTCA 58.975 55.000 0.00 0.00 43.27 3.86
1442 2044 1.611006 CTCGTCACCGATCATCCTCAT 59.389 52.381 0.00 0.00 43.27 2.90
1443 2045 1.609072 TCGTCACCGATCATCCTCATC 59.391 52.381 0.00 0.00 38.40 2.92
1567 2179 7.936584 TGTTTTTCATTTCCTTGTACTACTGG 58.063 34.615 0.00 0.00 0.00 4.00
1649 2262 6.403866 TGTTGTATTTGACTCATTTTGCCT 57.596 33.333 0.00 0.00 0.00 4.75
1654 2267 5.813513 ATTTGACTCATTTTGCCTCCTTT 57.186 34.783 0.00 0.00 0.00 3.11
1660 2278 2.030007 TCATTTTGCCTCCTTTTCTGCG 60.030 45.455 0.00 0.00 0.00 5.18
1664 2282 0.179004 TGCCTCCTTTTCTGCGGAAA 60.179 50.000 16.83 16.83 39.38 3.13
1665 2283 0.241213 GCCTCCTTTTCTGCGGAAAC 59.759 55.000 20.30 4.33 40.63 2.78
1748 2370 3.381272 CCTTCACTTTCCAAAGCACTGAA 59.619 43.478 0.00 2.16 39.63 3.02
1842 2464 3.282021 AGCATCCGTCAATAATTGTGCT 58.718 40.909 0.00 0.00 34.43 4.40
1843 2465 3.065786 AGCATCCGTCAATAATTGTGCTG 59.934 43.478 0.00 0.00 36.85 4.41
2029 2655 4.142049 GGGGAAATAAATTCGATTGGCACA 60.142 41.667 0.00 0.00 39.05 4.57
2081 2717 1.887198 ACGACGAACAAGTGATCTCCT 59.113 47.619 0.00 0.00 0.00 3.69
2105 2741 1.134699 ACCACTACATCAGATGTGCGG 60.135 52.381 24.15 21.23 44.60 5.69
2108 2744 3.375642 CACTACATCAGATGTGCGGTAG 58.624 50.000 24.15 15.65 44.60 3.18
2132 2768 2.031314 TCTTACGACGAAGCGATACCAG 59.969 50.000 0.00 0.00 34.83 4.00
2179 2815 2.101582 CCAGGTCCGTGGAGAATAAGAG 59.898 54.545 0.00 0.00 40.44 2.85
2220 2857 3.490348 ACAAGCAGTCACAAGGCTTATT 58.510 40.909 0.00 0.00 45.42 1.40
2245 2882 0.463295 CAAGAGTGGCAGCGGATGAT 60.463 55.000 0.00 0.00 0.00 2.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 3.143359 TGCTAGCCCTACCCCTCTATTTA 59.857 47.826 13.29 0.00 0.00 1.40
3 4 1.508185 TGCTAGCCCTACCCCTCTATT 59.492 52.381 13.29 0.00 0.00 1.73
5 6 0.187851 GTGCTAGCCCTACCCCTCTA 59.812 60.000 13.29 0.00 0.00 2.43
6 7 1.075151 GTGCTAGCCCTACCCCTCT 60.075 63.158 13.29 0.00 0.00 3.69
7 8 2.141448 GGTGCTAGCCCTACCCCTC 61.141 68.421 13.29 0.00 0.00 4.30
8 9 2.040779 GGTGCTAGCCCTACCCCT 60.041 66.667 13.29 0.00 0.00 4.79
9 10 3.169242 GGGTGCTAGCCCTACCCC 61.169 72.222 24.91 16.19 46.74 4.95
16 17 0.035056 ATGTGTCTTGGGTGCTAGCC 60.035 55.000 13.29 3.27 36.00 3.93
17 18 1.339055 TGATGTGTCTTGGGTGCTAGC 60.339 52.381 8.10 8.10 0.00 3.42
18 19 2.768253 TGATGTGTCTTGGGTGCTAG 57.232 50.000 0.00 0.00 0.00 3.42
19 20 2.637382 TCTTGATGTGTCTTGGGTGCTA 59.363 45.455 0.00 0.00 0.00 3.49
20 21 1.421268 TCTTGATGTGTCTTGGGTGCT 59.579 47.619 0.00 0.00 0.00 4.40
21 22 1.896220 TCTTGATGTGTCTTGGGTGC 58.104 50.000 0.00 0.00 0.00 5.01
22 23 3.631686 TGTTTCTTGATGTGTCTTGGGTG 59.368 43.478 0.00 0.00 0.00 4.61
23 24 3.632145 GTGTTTCTTGATGTGTCTTGGGT 59.368 43.478 0.00 0.00 0.00 4.51
24 25 3.004734 GGTGTTTCTTGATGTGTCTTGGG 59.995 47.826 0.00 0.00 0.00 4.12
25 26 3.631686 TGGTGTTTCTTGATGTGTCTTGG 59.368 43.478 0.00 0.00 0.00 3.61
26 27 4.898829 TGGTGTTTCTTGATGTGTCTTG 57.101 40.909 0.00 0.00 0.00 3.02
27 28 4.202050 GCTTGGTGTTTCTTGATGTGTCTT 60.202 41.667 0.00 0.00 0.00 3.01
28 29 3.316308 GCTTGGTGTTTCTTGATGTGTCT 59.684 43.478 0.00 0.00 0.00 3.41
29 30 3.550842 GGCTTGGTGTTTCTTGATGTGTC 60.551 47.826 0.00 0.00 0.00 3.67
30 31 2.362077 GGCTTGGTGTTTCTTGATGTGT 59.638 45.455 0.00 0.00 0.00 3.72
31 32 2.605338 CGGCTTGGTGTTTCTTGATGTG 60.605 50.000 0.00 0.00 0.00 3.21
32 33 1.608590 CGGCTTGGTGTTTCTTGATGT 59.391 47.619 0.00 0.00 0.00 3.06
33 34 1.608590 ACGGCTTGGTGTTTCTTGATG 59.391 47.619 0.00 0.00 0.00 3.07
34 35 1.608590 CACGGCTTGGTGTTTCTTGAT 59.391 47.619 0.00 0.00 33.24 2.57
35 36 1.021202 CACGGCTTGGTGTTTCTTGA 58.979 50.000 0.00 0.00 33.24 3.02
36 37 3.549997 CACGGCTTGGTGTTTCTTG 57.450 52.632 0.00 0.00 33.24 3.02
58 59 4.452733 GAGGAGACGGGGTTGCCG 62.453 72.222 0.00 0.00 0.00 5.69
59 60 1.677637 CTAGAGGAGACGGGGTTGCC 61.678 65.000 0.00 0.00 0.00 4.52
60 61 0.971447 ACTAGAGGAGACGGGGTTGC 60.971 60.000 0.00 0.00 0.00 4.17
61 62 1.558233 AACTAGAGGAGACGGGGTTG 58.442 55.000 0.00 0.00 0.00 3.77
62 63 2.322339 AAACTAGAGGAGACGGGGTT 57.678 50.000 0.00 0.00 0.00 4.11
63 64 3.564264 GATAAACTAGAGGAGACGGGGT 58.436 50.000 0.00 0.00 0.00 4.95
64 65 2.892215 GGATAAACTAGAGGAGACGGGG 59.108 54.545 0.00 0.00 0.00 5.73
65 66 3.822167 GAGGATAAACTAGAGGAGACGGG 59.178 52.174 0.00 0.00 0.00 5.28
66 67 3.822167 GGAGGATAAACTAGAGGAGACGG 59.178 52.174 0.00 0.00 0.00 4.79
67 68 3.499157 CGGAGGATAAACTAGAGGAGACG 59.501 52.174 0.00 0.00 0.00 4.18
68 69 4.463070 ACGGAGGATAAACTAGAGGAGAC 58.537 47.826 0.00 0.00 0.00 3.36
69 70 4.165565 TGACGGAGGATAAACTAGAGGAGA 59.834 45.833 0.00 0.00 0.00 3.71
70 71 4.462133 TGACGGAGGATAAACTAGAGGAG 58.538 47.826 0.00 0.00 0.00 3.69
71 72 4.515028 TGACGGAGGATAAACTAGAGGA 57.485 45.455 0.00 0.00 0.00 3.71
72 73 6.005198 ACTATGACGGAGGATAAACTAGAGG 58.995 44.000 0.00 0.00 0.00 3.69
73 74 7.513371 AACTATGACGGAGGATAAACTAGAG 57.487 40.000 0.00 0.00 0.00 2.43
74 75 7.893124 AAACTATGACGGAGGATAAACTAGA 57.107 36.000 0.00 0.00 0.00 2.43
75 76 7.378995 CGAAAACTATGACGGAGGATAAACTAG 59.621 40.741 0.00 0.00 0.00 2.57
76 77 7.148018 ACGAAAACTATGACGGAGGATAAACTA 60.148 37.037 0.00 0.00 0.00 2.24
77 78 6.040878 CGAAAACTATGACGGAGGATAAACT 58.959 40.000 0.00 0.00 0.00 2.66
78 79 5.809051 ACGAAAACTATGACGGAGGATAAAC 59.191 40.000 0.00 0.00 0.00 2.01
79 80 5.969423 ACGAAAACTATGACGGAGGATAAA 58.031 37.500 0.00 0.00 0.00 1.40
80 81 5.587388 ACGAAAACTATGACGGAGGATAA 57.413 39.130 0.00 0.00 0.00 1.75
81 82 5.824624 ACTACGAAAACTATGACGGAGGATA 59.175 40.000 0.00 0.00 40.45 2.59
82 83 4.643784 ACTACGAAAACTATGACGGAGGAT 59.356 41.667 0.00 0.00 40.45 3.24
83 84 4.012374 ACTACGAAAACTATGACGGAGGA 58.988 43.478 0.00 0.00 40.45 3.71
84 85 4.103357 CACTACGAAAACTATGACGGAGG 58.897 47.826 0.00 0.00 40.45 4.30
85 86 3.546670 GCACTACGAAAACTATGACGGAG 59.453 47.826 0.00 0.00 41.66 4.63
86 87 3.192001 AGCACTACGAAAACTATGACGGA 59.808 43.478 0.00 0.00 0.00 4.69
87 88 3.508762 AGCACTACGAAAACTATGACGG 58.491 45.455 0.00 0.00 0.00 4.79
88 89 6.006072 GTAAGCACTACGAAAACTATGACG 57.994 41.667 0.00 0.00 0.00 4.35
107 108 0.459585 TTAGCAGGGCTTCGCGTAAG 60.460 55.000 5.77 9.90 40.44 2.34
108 109 0.459585 CTTAGCAGGGCTTCGCGTAA 60.460 55.000 5.77 0.00 40.44 3.18
109 110 1.141019 CTTAGCAGGGCTTCGCGTA 59.859 57.895 5.77 0.00 40.44 4.42
110 111 1.961180 ATCTTAGCAGGGCTTCGCGT 61.961 55.000 5.77 0.00 40.44 6.01
111 112 0.811616 AATCTTAGCAGGGCTTCGCG 60.812 55.000 0.00 0.00 40.44 5.87
112 113 0.659957 CAATCTTAGCAGGGCTTCGC 59.340 55.000 0.00 0.00 40.44 4.70
113 114 2.029838 ACAATCTTAGCAGGGCTTCG 57.970 50.000 0.00 0.00 40.44 3.79
114 115 3.615155 AGAACAATCTTAGCAGGGCTTC 58.385 45.455 0.00 0.00 40.44 3.86
115 116 3.728385 AGAACAATCTTAGCAGGGCTT 57.272 42.857 0.00 0.00 40.44 4.35
116 117 3.009473 TGAAGAACAATCTTAGCAGGGCT 59.991 43.478 0.00 0.00 45.91 5.19
117 118 3.127721 GTGAAGAACAATCTTAGCAGGGC 59.872 47.826 0.00 0.00 45.91 5.19
118 119 3.691609 GGTGAAGAACAATCTTAGCAGGG 59.308 47.826 0.00 0.00 45.91 4.45
119 120 4.326826 TGGTGAAGAACAATCTTAGCAGG 58.673 43.478 0.00 0.00 45.91 4.85
120 121 5.239306 TGTTGGTGAAGAACAATCTTAGCAG 59.761 40.000 0.00 0.00 45.91 4.24
121 122 5.008613 GTGTTGGTGAAGAACAATCTTAGCA 59.991 40.000 0.00 0.00 45.91 3.49
122 123 5.452777 GTGTTGGTGAAGAACAATCTTAGC 58.547 41.667 0.00 0.00 45.91 3.09
123 124 5.530915 TGGTGTTGGTGAAGAACAATCTTAG 59.469 40.000 0.00 0.00 45.91 2.18
124 125 5.441500 TGGTGTTGGTGAAGAACAATCTTA 58.558 37.500 0.00 0.00 45.91 2.10
126 127 3.897239 TGGTGTTGGTGAAGAACAATCT 58.103 40.909 0.00 0.00 35.15 2.40
127 128 4.278170 TGATGGTGTTGGTGAAGAACAATC 59.722 41.667 0.00 0.00 35.15 2.67
128 129 4.037923 GTGATGGTGTTGGTGAAGAACAAT 59.962 41.667 0.00 0.00 35.15 2.71
129 130 3.380004 GTGATGGTGTTGGTGAAGAACAA 59.620 43.478 0.00 0.00 35.15 2.83
130 131 2.948979 GTGATGGTGTTGGTGAAGAACA 59.051 45.455 0.00 0.00 0.00 3.18
131 132 2.293399 GGTGATGGTGTTGGTGAAGAAC 59.707 50.000 0.00 0.00 0.00 3.01
132 133 2.092158 TGGTGATGGTGTTGGTGAAGAA 60.092 45.455 0.00 0.00 0.00 2.52
133 134 1.492599 TGGTGATGGTGTTGGTGAAGA 59.507 47.619 0.00 0.00 0.00 2.87
134 135 1.608590 GTGGTGATGGTGTTGGTGAAG 59.391 52.381 0.00 0.00 0.00 3.02
135 136 1.686355 GTGGTGATGGTGTTGGTGAA 58.314 50.000 0.00 0.00 0.00 3.18
136 137 0.533978 CGTGGTGATGGTGTTGGTGA 60.534 55.000 0.00 0.00 0.00 4.02
137 138 1.948508 CGTGGTGATGGTGTTGGTG 59.051 57.895 0.00 0.00 0.00 4.17
138 139 1.896660 GCGTGGTGATGGTGTTGGT 60.897 57.895 0.00 0.00 0.00 3.67
139 140 2.625823 GGCGTGGTGATGGTGTTGG 61.626 63.158 0.00 0.00 0.00 3.77
140 141 2.953821 GGCGTGGTGATGGTGTTG 59.046 61.111 0.00 0.00 0.00 3.33
141 142 2.668212 CGGCGTGGTGATGGTGTT 60.668 61.111 0.00 0.00 0.00 3.32
142 143 3.876589 GACGGCGTGGTGATGGTGT 62.877 63.158 21.19 0.00 0.00 4.16
143 144 3.118454 GACGGCGTGGTGATGGTG 61.118 66.667 21.19 0.00 0.00 4.17
144 145 4.735132 CGACGGCGTGGTGATGGT 62.735 66.667 21.19 0.00 0.00 3.55
158 159 3.112709 GAGTTCCGGCAGCACGAC 61.113 66.667 0.00 0.00 35.47 4.34
159 160 2.835701 GATGAGTTCCGGCAGCACGA 62.836 60.000 0.00 0.00 35.47 4.35
160 161 2.434884 ATGAGTTCCGGCAGCACG 60.435 61.111 0.00 0.00 0.00 5.34
161 162 0.175760 TAGATGAGTTCCGGCAGCAC 59.824 55.000 0.00 0.00 0.00 4.40
162 163 0.175760 GTAGATGAGTTCCGGCAGCA 59.824 55.000 0.00 0.00 0.00 4.41
163 164 0.461961 AGTAGATGAGTTCCGGCAGC 59.538 55.000 0.00 0.00 0.00 5.25
164 165 2.952978 AGTAGTAGATGAGTTCCGGCAG 59.047 50.000 0.00 0.00 0.00 4.85
165 166 3.014304 AGTAGTAGATGAGTTCCGGCA 57.986 47.619 0.00 0.00 0.00 5.69
166 167 3.548415 CGAAGTAGTAGATGAGTTCCGGC 60.548 52.174 0.00 0.00 0.00 6.13
167 168 3.548415 GCGAAGTAGTAGATGAGTTCCGG 60.548 52.174 0.00 0.00 0.00 5.14
168 169 3.548415 GGCGAAGTAGTAGATGAGTTCCG 60.548 52.174 0.00 0.00 0.00 4.30
169 170 3.243468 GGGCGAAGTAGTAGATGAGTTCC 60.243 52.174 0.00 0.00 0.00 3.62
170 171 3.243468 GGGGCGAAGTAGTAGATGAGTTC 60.243 52.174 0.00 0.00 0.00 3.01
171 172 2.694109 GGGGCGAAGTAGTAGATGAGTT 59.306 50.000 0.00 0.00 0.00 3.01
172 173 2.091775 AGGGGCGAAGTAGTAGATGAGT 60.092 50.000 0.00 0.00 0.00 3.41
173 174 2.554893 GAGGGGCGAAGTAGTAGATGAG 59.445 54.545 0.00 0.00 0.00 2.90
174 175 2.175069 AGAGGGGCGAAGTAGTAGATGA 59.825 50.000 0.00 0.00 0.00 2.92
175 176 2.588620 AGAGGGGCGAAGTAGTAGATG 58.411 52.381 0.00 0.00 0.00 2.90
176 177 2.959707 CAAGAGGGGCGAAGTAGTAGAT 59.040 50.000 0.00 0.00 0.00 1.98
177 178 2.376109 CAAGAGGGGCGAAGTAGTAGA 58.624 52.381 0.00 0.00 0.00 2.59
178 179 1.202428 GCAAGAGGGGCGAAGTAGTAG 60.202 57.143 0.00 0.00 0.00 2.57
179 180 0.822164 GCAAGAGGGGCGAAGTAGTA 59.178 55.000 0.00 0.00 0.00 1.82
180 181 0.905337 AGCAAGAGGGGCGAAGTAGT 60.905 55.000 0.00 0.00 36.08 2.73
181 182 0.460987 CAGCAAGAGGGGCGAAGTAG 60.461 60.000 0.00 0.00 36.08 2.57
182 183 1.596934 CAGCAAGAGGGGCGAAGTA 59.403 57.895 0.00 0.00 36.08 2.24
183 184 2.348998 CAGCAAGAGGGGCGAAGT 59.651 61.111 0.00 0.00 36.08 3.01
184 185 2.262774 ATCCAGCAAGAGGGGCGAAG 62.263 60.000 0.00 0.00 36.08 3.79
185 186 2.257409 GATCCAGCAAGAGGGGCGAA 62.257 60.000 0.00 0.00 36.08 4.70
186 187 2.688666 ATCCAGCAAGAGGGGCGA 60.689 61.111 0.00 0.00 36.08 5.54
187 188 2.203126 GATCCAGCAAGAGGGGCG 60.203 66.667 0.00 0.00 36.08 6.13
188 189 2.203126 CGATCCAGCAAGAGGGGC 60.203 66.667 0.00 0.00 0.00 5.80
189 190 1.045350 TCTCGATCCAGCAAGAGGGG 61.045 60.000 0.00 0.00 0.00 4.79
190 191 0.826715 TTCTCGATCCAGCAAGAGGG 59.173 55.000 0.00 0.00 0.00 4.30
191 192 1.202510 CCTTCTCGATCCAGCAAGAGG 60.203 57.143 0.00 0.00 0.00 3.69
192 193 1.805871 GCCTTCTCGATCCAGCAAGAG 60.806 57.143 0.00 0.00 0.00 2.85
193 194 0.176680 GCCTTCTCGATCCAGCAAGA 59.823 55.000 0.00 0.00 0.00 3.02
194 195 1.150567 CGCCTTCTCGATCCAGCAAG 61.151 60.000 0.00 0.00 0.00 4.01
195 196 1.153568 CGCCTTCTCGATCCAGCAA 60.154 57.895 0.00 0.00 0.00 3.91
196 197 2.009424 CTCGCCTTCTCGATCCAGCA 62.009 60.000 0.00 0.00 37.87 4.41
197 198 1.299773 CTCGCCTTCTCGATCCAGC 60.300 63.158 0.00 0.00 37.87 4.85
198 199 1.103987 TCCTCGCCTTCTCGATCCAG 61.104 60.000 0.00 0.00 37.87 3.86
199 200 1.076995 TCCTCGCCTTCTCGATCCA 60.077 57.895 0.00 0.00 37.87 3.41
200 201 1.360911 GTCCTCGCCTTCTCGATCC 59.639 63.158 0.00 0.00 37.87 3.36
201 202 1.009449 CGTCCTCGCCTTCTCGATC 60.009 63.158 0.00 0.00 37.87 3.69
202 203 1.716826 GACGTCCTCGCCTTCTCGAT 61.717 60.000 3.51 0.00 41.18 3.59
203 204 2.359602 ACGTCCTCGCCTTCTCGA 60.360 61.111 0.00 0.00 41.18 4.04
204 205 2.100603 GACGTCCTCGCCTTCTCG 59.899 66.667 3.51 0.00 41.18 4.04
205 206 1.153997 GTGACGTCCTCGCCTTCTC 60.154 63.158 14.12 0.00 41.18 2.87
206 207 2.637383 GGTGACGTCCTCGCCTTCT 61.637 63.158 14.12 0.00 45.20 2.85
207 208 2.126031 GGTGACGTCCTCGCCTTC 60.126 66.667 14.12 0.00 45.20 3.46
219 220 3.103911 CACGTTCGGCTCGGTGAC 61.104 66.667 0.00 0.00 0.00 3.67
220 221 3.598715 ACACGTTCGGCTCGGTGA 61.599 61.111 8.56 0.00 0.00 4.02
221 222 3.403057 CACACGTTCGGCTCGGTG 61.403 66.667 0.00 0.00 0.00 4.94
224 225 3.767230 CTGCACACGTTCGGCTCG 61.767 66.667 4.71 0.00 0.00 5.03
225 226 1.954146 TTCTGCACACGTTCGGCTC 60.954 57.895 4.71 0.00 0.00 4.70
226 227 2.108157 TTCTGCACACGTTCGGCT 59.892 55.556 4.71 0.00 0.00 5.52
227 228 2.159272 GAGTTCTGCACACGTTCGGC 62.159 60.000 0.00 0.00 0.00 5.54
228 229 1.853319 GAGTTCTGCACACGTTCGG 59.147 57.895 0.00 0.00 0.00 4.30
229 230 1.482955 CGAGTTCTGCACACGTTCG 59.517 57.895 0.00 0.00 35.01 3.95
230 231 0.596600 TCCGAGTTCTGCACACGTTC 60.597 55.000 0.00 0.00 37.75 3.95
231 232 0.597637 CTCCGAGTTCTGCACACGTT 60.598 55.000 0.00 0.00 37.75 3.99
232 233 1.007271 CTCCGAGTTCTGCACACGT 60.007 57.895 0.00 0.00 37.75 4.49
233 234 1.734477 CCTCCGAGTTCTGCACACG 60.734 63.158 0.00 0.00 39.03 4.49
234 235 0.946221 CACCTCCGAGTTCTGCACAC 60.946 60.000 0.00 0.00 0.00 3.82
235 236 1.367471 CACCTCCGAGTTCTGCACA 59.633 57.895 0.00 0.00 0.00 4.57
236 237 2.029844 GCACCTCCGAGTTCTGCAC 61.030 63.158 0.00 0.00 0.00 4.57
237 238 2.343758 GCACCTCCGAGTTCTGCA 59.656 61.111 0.00 0.00 0.00 4.41
238 239 2.435059 GGCACCTCCGAGTTCTGC 60.435 66.667 0.00 0.00 0.00 4.26
247 248 3.423154 CGAAAGCACGGCACCTCC 61.423 66.667 0.00 0.00 0.00 4.30
248 249 3.423154 CCGAAAGCACGGCACCTC 61.423 66.667 4.29 0.00 46.20 3.85
255 256 1.659098 GATCCAAGTACCGAAAGCACG 59.341 52.381 0.00 0.00 0.00 5.34
256 257 1.659098 CGATCCAAGTACCGAAAGCAC 59.341 52.381 0.00 0.00 0.00 4.40
257 258 1.404986 CCGATCCAAGTACCGAAAGCA 60.405 52.381 0.00 0.00 0.00 3.91
258 259 1.287425 CCGATCCAAGTACCGAAAGC 58.713 55.000 0.00 0.00 0.00 3.51
259 260 2.537401 GACCGATCCAAGTACCGAAAG 58.463 52.381 0.00 0.00 0.00 2.62
260 261 1.135315 CGACCGATCCAAGTACCGAAA 60.135 52.381 0.00 0.00 0.00 3.46
261 262 0.452987 CGACCGATCCAAGTACCGAA 59.547 55.000 0.00 0.00 0.00 4.30
262 263 1.378882 CCGACCGATCCAAGTACCGA 61.379 60.000 0.00 0.00 0.00 4.69
263 264 1.065273 CCGACCGATCCAAGTACCG 59.935 63.158 0.00 0.00 0.00 4.02
264 265 1.000496 GATCCGACCGATCCAAGTACC 60.000 57.143 0.00 0.00 41.51 3.34
265 266 1.334779 CGATCCGACCGATCCAAGTAC 60.335 57.143 0.00 0.00 44.07 2.73
266 267 0.949397 CGATCCGACCGATCCAAGTA 59.051 55.000 0.00 0.00 44.07 2.24
267 268 1.035932 ACGATCCGACCGATCCAAGT 61.036 55.000 0.00 0.00 44.07 3.16
268 269 0.595053 CACGATCCGACCGATCCAAG 60.595 60.000 0.00 0.00 44.07 3.61
269 270 1.033202 TCACGATCCGACCGATCCAA 61.033 55.000 0.00 0.00 44.07 3.53
270 271 1.033202 TTCACGATCCGACCGATCCA 61.033 55.000 0.00 0.00 44.07 3.41
271 272 0.317938 CTTCACGATCCGACCGATCC 60.318 60.000 0.00 0.00 44.07 3.36
272 273 0.661552 TCTTCACGATCCGACCGATC 59.338 55.000 0.00 0.00 43.58 3.69
273 274 0.381089 GTCTTCACGATCCGACCGAT 59.619 55.000 0.00 0.00 0.00 4.18
274 275 1.798735 GTCTTCACGATCCGACCGA 59.201 57.895 0.00 0.00 0.00 4.69
275 276 4.379221 GTCTTCACGATCCGACCG 57.621 61.111 0.00 0.00 0.00 4.79
285 286 4.332186 TGATGTAGTCGTACGTCTTCAC 57.668 45.455 19.61 13.19 43.23 3.18
286 287 4.378770 GGTTGATGTAGTCGTACGTCTTCA 60.379 45.833 19.61 19.79 43.23 3.02
287 288 4.094212 GGTTGATGTAGTCGTACGTCTTC 58.906 47.826 19.61 15.02 43.23 2.87
288 289 3.425359 CGGTTGATGTAGTCGTACGTCTT 60.425 47.826 19.61 2.66 43.23 3.01
289 290 2.094894 CGGTTGATGTAGTCGTACGTCT 59.905 50.000 18.54 18.54 43.23 4.18
290 291 2.434761 CGGTTGATGTAGTCGTACGTC 58.565 52.381 16.05 10.06 43.16 4.34
291 292 1.466360 GCGGTTGATGTAGTCGTACGT 60.466 52.381 16.05 0.00 30.95 3.57
292 293 1.186030 GCGGTTGATGTAGTCGTACG 58.814 55.000 9.53 9.53 30.95 3.67
293 294 1.186030 CGCGGTTGATGTAGTCGTAC 58.814 55.000 0.00 0.00 0.00 3.67
294 295 0.804364 ACGCGGTTGATGTAGTCGTA 59.196 50.000 12.47 0.00 0.00 3.43
295 296 0.038892 AACGCGGTTGATGTAGTCGT 60.039 50.000 12.47 0.00 0.00 4.34
296 297 0.365523 CAACGCGGTTGATGTAGTCG 59.634 55.000 12.47 0.00 45.28 4.18
297 298 1.705256 TCAACGCGGTTGATGTAGTC 58.295 50.000 12.47 0.00 45.88 2.59
298 299 3.898380 TCAACGCGGTTGATGTAGT 57.102 47.368 12.47 0.00 45.88 2.73
328 329 1.030457 ACCCTCATAGACCGTAAGCG 58.970 55.000 0.00 0.00 37.95 4.68
329 330 2.031333 CGTACCCTCATAGACCGTAAGC 60.031 54.545 0.00 0.00 0.00 3.09
330 331 3.209410 ACGTACCCTCATAGACCGTAAG 58.791 50.000 0.00 0.00 0.00 2.34
331 332 3.281727 ACGTACCCTCATAGACCGTAA 57.718 47.619 0.00 0.00 0.00 3.18
332 333 3.641436 TCTACGTACCCTCATAGACCGTA 59.359 47.826 0.00 0.00 0.00 4.02
333 334 2.435805 TCTACGTACCCTCATAGACCGT 59.564 50.000 0.00 0.00 0.00 4.83
334 335 3.117491 TCTACGTACCCTCATAGACCG 57.883 52.381 0.00 0.00 0.00 4.79
335 336 6.000219 TGTTATCTACGTACCCTCATAGACC 59.000 44.000 0.00 0.00 0.00 3.85
336 337 6.709846 AGTGTTATCTACGTACCCTCATAGAC 59.290 42.308 0.00 0.00 0.00 2.59
337 338 6.835174 AGTGTTATCTACGTACCCTCATAGA 58.165 40.000 0.00 0.00 0.00 1.98
338 339 6.935771 AGAGTGTTATCTACGTACCCTCATAG 59.064 42.308 0.00 0.00 0.00 2.23
339 340 6.835174 AGAGTGTTATCTACGTACCCTCATA 58.165 40.000 0.00 0.00 0.00 2.15
340 341 5.692928 AGAGTGTTATCTACGTACCCTCAT 58.307 41.667 0.00 0.00 0.00 2.90
341 342 5.108187 AGAGTGTTATCTACGTACCCTCA 57.892 43.478 0.00 0.00 0.00 3.86
342 343 4.514816 GGAGAGTGTTATCTACGTACCCTC 59.485 50.000 0.00 0.00 0.00 4.30
343 344 4.459330 GGAGAGTGTTATCTACGTACCCT 58.541 47.826 0.00 0.00 0.00 4.34
344 345 3.567585 GGGAGAGTGTTATCTACGTACCC 59.432 52.174 0.00 0.00 30.07 3.69
345 346 3.567585 GGGGAGAGTGTTATCTACGTACC 59.432 52.174 0.00 0.00 30.07 3.34
346 347 4.459330 AGGGGAGAGTGTTATCTACGTAC 58.541 47.826 0.00 0.00 30.07 3.67
347 348 4.411540 AGAGGGGAGAGTGTTATCTACGTA 59.588 45.833 0.00 0.00 30.07 3.57
348 349 3.202595 AGAGGGGAGAGTGTTATCTACGT 59.797 47.826 0.00 0.00 30.07 3.57
349 350 3.816523 GAGAGGGGAGAGTGTTATCTACG 59.183 52.174 0.00 0.00 30.07 3.51
350 351 3.816523 CGAGAGGGGAGAGTGTTATCTAC 59.183 52.174 0.00 0.00 0.00 2.59
351 352 3.458857 ACGAGAGGGGAGAGTGTTATCTA 59.541 47.826 0.00 0.00 0.00 1.98
352 353 2.242708 ACGAGAGGGGAGAGTGTTATCT 59.757 50.000 0.00 0.00 0.00 1.98
353 354 2.657143 ACGAGAGGGGAGAGTGTTATC 58.343 52.381 0.00 0.00 0.00 1.75
354 355 2.761208 CAACGAGAGGGGAGAGTGTTAT 59.239 50.000 0.00 0.00 0.00 1.89
355 356 2.168496 CAACGAGAGGGGAGAGTGTTA 58.832 52.381 0.00 0.00 0.00 2.41
356 357 0.969894 CAACGAGAGGGGAGAGTGTT 59.030 55.000 0.00 0.00 0.00 3.32
357 358 1.536943 GCAACGAGAGGGGAGAGTGT 61.537 60.000 0.00 0.00 0.00 3.55
358 359 1.216710 GCAACGAGAGGGGAGAGTG 59.783 63.158 0.00 0.00 0.00 3.51
359 360 0.331954 TAGCAACGAGAGGGGAGAGT 59.668 55.000 0.00 0.00 0.00 3.24
360 361 1.339610 CATAGCAACGAGAGGGGAGAG 59.660 57.143 0.00 0.00 0.00 3.20
361 362 1.403814 CATAGCAACGAGAGGGGAGA 58.596 55.000 0.00 0.00 0.00 3.71
362 363 0.249657 GCATAGCAACGAGAGGGGAG 60.250 60.000 0.00 0.00 0.00 4.30
363 364 0.975556 TGCATAGCAACGAGAGGGGA 60.976 55.000 0.00 0.00 34.76 4.81
364 365 0.107456 ATGCATAGCAACGAGAGGGG 59.893 55.000 0.00 0.00 43.62 4.79
365 366 1.202568 TGATGCATAGCAACGAGAGGG 60.203 52.381 0.00 0.00 43.62 4.30
366 367 1.863454 GTGATGCATAGCAACGAGAGG 59.137 52.381 0.00 0.00 43.62 3.69
367 368 1.863454 GGTGATGCATAGCAACGAGAG 59.137 52.381 0.00 0.00 43.62 3.20
368 369 1.206849 TGGTGATGCATAGCAACGAGA 59.793 47.619 0.00 0.00 43.62 4.04
369 370 1.655484 TGGTGATGCATAGCAACGAG 58.345 50.000 0.00 0.00 43.62 4.18
370 371 1.941975 CATGGTGATGCATAGCAACGA 59.058 47.619 0.00 0.00 43.62 3.85
371 372 1.941975 TCATGGTGATGCATAGCAACG 59.058 47.619 0.00 1.35 43.62 4.10
372 373 3.819337 AGATCATGGTGATGCATAGCAAC 59.181 43.478 0.00 0.00 43.62 4.17
373 374 4.094830 AGATCATGGTGATGCATAGCAA 57.905 40.909 0.00 0.00 43.62 3.91
374 375 3.782656 AGATCATGGTGATGCATAGCA 57.217 42.857 0.00 4.86 44.86 3.49
375 376 3.366070 GCAAGATCATGGTGATGCATAGC 60.366 47.826 0.00 0.00 37.20 2.97
376 377 3.120304 CGCAAGATCATGGTGATGCATAG 60.120 47.826 0.00 0.00 37.20 2.23
377 378 2.809696 CGCAAGATCATGGTGATGCATA 59.190 45.455 0.00 0.00 37.20 3.14
378 379 1.607148 CGCAAGATCATGGTGATGCAT 59.393 47.619 0.00 0.00 37.20 3.96
379 380 1.018910 CGCAAGATCATGGTGATGCA 58.981 50.000 11.83 0.00 37.20 3.96
380 381 1.019673 ACGCAAGATCATGGTGATGC 58.980 50.000 0.00 3.06 37.20 3.91
381 382 2.011947 ACACGCAAGATCATGGTGATG 58.988 47.619 19.56 8.58 37.20 3.07
382 383 2.011947 CACACGCAAGATCATGGTGAT 58.988 47.619 19.56 0.00 40.34 3.06
383 384 1.441738 CACACGCAAGATCATGGTGA 58.558 50.000 19.56 0.00 43.62 4.02
384 385 0.179181 GCACACGCAAGATCATGGTG 60.179 55.000 14.17 14.17 43.62 4.17
385 386 1.638388 CGCACACGCAAGATCATGGT 61.638 55.000 0.00 0.00 43.62 3.55
386 387 1.061411 CGCACACGCAAGATCATGG 59.939 57.895 0.00 0.00 43.62 3.66
387 388 0.998669 TACGCACACGCAAGATCATG 59.001 50.000 0.00 0.00 45.53 3.07
388 389 1.280982 CTACGCACACGCAAGATCAT 58.719 50.000 0.00 0.00 45.53 2.45
389 390 0.735978 CCTACGCACACGCAAGATCA 60.736 55.000 0.00 0.00 45.53 2.92
390 391 0.457853 TCCTACGCACACGCAAGATC 60.458 55.000 0.00 0.00 45.53 2.75
391 392 0.175760 ATCCTACGCACACGCAAGAT 59.824 50.000 0.00 0.00 45.53 2.40
392 393 0.037697 AATCCTACGCACACGCAAGA 60.038 50.000 0.00 0.00 45.53 3.02
393 394 0.796312 AAATCCTACGCACACGCAAG 59.204 50.000 0.00 0.00 45.53 4.01
394 395 1.231221 AAAATCCTACGCACACGCAA 58.769 45.000 0.00 0.00 45.53 4.85
395 396 1.231221 AAAAATCCTACGCACACGCA 58.769 45.000 0.00 0.00 45.53 5.24
414 415 6.956202 TGGGGAACGTAGTAATTTCAAAAA 57.044 33.333 0.00 0.00 45.00 1.94
415 416 6.320672 TGTTGGGGAACGTAGTAATTTCAAAA 59.679 34.615 0.00 0.00 45.00 2.44
416 417 5.826737 TGTTGGGGAACGTAGTAATTTCAAA 59.173 36.000 0.00 0.00 45.00 2.69
417 418 5.374921 TGTTGGGGAACGTAGTAATTTCAA 58.625 37.500 0.00 0.00 45.00 2.69
418 419 4.970711 TGTTGGGGAACGTAGTAATTTCA 58.029 39.130 0.00 0.00 45.00 2.69
419 420 7.043565 TCTATGTTGGGGAACGTAGTAATTTC 58.956 38.462 11.91 0.00 45.00 2.17
420 421 6.949715 TCTATGTTGGGGAACGTAGTAATTT 58.050 36.000 11.91 0.00 45.00 1.82
421 422 6.381994 TCTCTATGTTGGGGAACGTAGTAATT 59.618 38.462 11.91 0.00 45.00 1.40
422 423 5.895534 TCTCTATGTTGGGGAACGTAGTAAT 59.104 40.000 11.91 0.00 45.00 1.89
423 424 5.263599 TCTCTATGTTGGGGAACGTAGTAA 58.736 41.667 11.91 2.46 45.00 2.24
424 425 4.858850 TCTCTATGTTGGGGAACGTAGTA 58.141 43.478 11.91 2.70 45.00 1.82
426 427 4.081862 TGTTCTCTATGTTGGGGAACGTAG 60.082 45.833 7.56 7.56 41.40 3.51
427 428 3.833650 TGTTCTCTATGTTGGGGAACGTA 59.166 43.478 0.00 0.00 39.05 3.57
428 429 2.635915 TGTTCTCTATGTTGGGGAACGT 59.364 45.455 0.00 0.00 39.05 3.99
429 430 3.328382 TGTTCTCTATGTTGGGGAACG 57.672 47.619 0.00 0.00 39.05 3.95
430 431 4.652822 ACTTGTTCTCTATGTTGGGGAAC 58.347 43.478 0.00 0.00 37.41 3.62
431 432 4.993705 ACTTGTTCTCTATGTTGGGGAA 57.006 40.909 0.00 0.00 0.00 3.97
432 433 4.349636 TGAACTTGTTCTCTATGTTGGGGA 59.650 41.667 13.65 0.00 0.00 4.81
433 434 4.455877 GTGAACTTGTTCTCTATGTTGGGG 59.544 45.833 13.65 0.00 0.00 4.96
434 435 5.063204 TGTGAACTTGTTCTCTATGTTGGG 58.937 41.667 13.65 0.00 0.00 4.12
435 436 6.128172 GGATGTGAACTTGTTCTCTATGTTGG 60.128 42.308 13.65 0.00 0.00 3.77
436 437 6.128172 GGGATGTGAACTTGTTCTCTATGTTG 60.128 42.308 13.65 0.00 0.00 3.33
437 438 5.940470 GGGATGTGAACTTGTTCTCTATGTT 59.060 40.000 13.65 0.00 0.00 2.71
438 439 5.491982 GGGATGTGAACTTGTTCTCTATGT 58.508 41.667 13.65 0.97 0.00 2.29
439 440 4.568359 CGGGATGTGAACTTGTTCTCTATG 59.432 45.833 13.65 0.00 0.00 2.23
440 441 4.383118 CCGGGATGTGAACTTGTTCTCTAT 60.383 45.833 13.65 6.33 0.00 1.98
441 442 3.056107 CCGGGATGTGAACTTGTTCTCTA 60.056 47.826 13.65 2.32 0.00 2.43
442 443 2.289694 CCGGGATGTGAACTTGTTCTCT 60.290 50.000 13.65 2.43 0.00 3.10
443 444 2.076863 CCGGGATGTGAACTTGTTCTC 58.923 52.381 13.65 10.82 0.00 2.87
444 445 1.697432 TCCGGGATGTGAACTTGTTCT 59.303 47.619 13.65 0.00 0.00 3.01
445 446 2.178912 TCCGGGATGTGAACTTGTTC 57.821 50.000 0.00 6.56 0.00 3.18
446 447 2.649531 TTCCGGGATGTGAACTTGTT 57.350 45.000 0.00 0.00 0.00 2.83
447 448 2.649531 TTTCCGGGATGTGAACTTGT 57.350 45.000 0.00 0.00 0.00 3.16
448 449 4.519540 AATTTTCCGGGATGTGAACTTG 57.480 40.909 0.00 0.00 0.00 3.16
456 457 4.916983 TGCATCTTAATTTTCCGGGATG 57.083 40.909 0.00 5.10 35.21 3.51
502 514 4.321008 GCGTGGACCTAATGATATCGAAGA 60.321 45.833 0.00 0.00 45.75 2.87
509 521 0.747852 TGCGCGTGGACCTAATGATA 59.252 50.000 8.43 0.00 0.00 2.15
515 527 2.752640 TAGCTGCGCGTGGACCTA 60.753 61.111 8.43 0.00 0.00 3.08
517 529 4.436998 AGTAGCTGCGCGTGGACC 62.437 66.667 8.43 0.00 0.00 4.46
520 532 1.811266 ATTGAGTAGCTGCGCGTGG 60.811 57.895 8.43 1.49 0.00 4.94
523 535 0.933097 AATCATTGAGTAGCTGCGCG 59.067 50.000 0.00 0.00 0.00 6.86
526 538 5.300969 TCACAAAATCATTGAGTAGCTGC 57.699 39.130 0.00 0.00 0.00 5.25
539 551 7.865706 AGGTCCACATATACTTCACAAAATC 57.134 36.000 0.00 0.00 0.00 2.17
542 554 7.247456 TGTAGGTCCACATATACTTCACAAA 57.753 36.000 0.00 0.00 0.00 2.83
550 562 7.051623 TGTTTCCATTGTAGGTCCACATATAC 58.948 38.462 0.00 0.00 0.00 1.47
551 563 7.201702 TGTTTCCATTGTAGGTCCACATATA 57.798 36.000 0.00 0.00 0.00 0.86
565 577 9.919348 CAAACATTAGTTCTTTTGTTTCCATTG 57.081 29.630 0.00 0.00 39.55 2.82
575 587 7.275560 GTGCACAACTCAAACATTAGTTCTTTT 59.724 33.333 13.17 0.00 36.84 2.27
661 673 6.476706 CACTACATCATACACGTCAATGTCAT 59.523 38.462 6.55 0.00 33.85 3.06
662 674 5.804979 CACTACATCATACACGTCAATGTCA 59.195 40.000 6.55 0.00 33.85 3.58
670 682 6.650427 ATCCATACACTACATCATACACGT 57.350 37.500 0.00 0.00 0.00 4.49
671 683 6.366061 CCAATCCATACACTACATCATACACG 59.634 42.308 0.00 0.00 0.00 4.49
672 684 7.441836 TCCAATCCATACACTACATCATACAC 58.558 38.462 0.00 0.00 0.00 2.90
673 685 7.508977 TCTCCAATCCATACACTACATCATACA 59.491 37.037 0.00 0.00 0.00 2.29
695 874 8.859090 CATCCATATATCTTATCTGGACTCTCC 58.141 40.741 4.35 0.00 38.74 3.71
697 876 9.420118 GACATCCATATATCTTATCTGGACTCT 57.580 37.037 4.35 0.00 38.74 3.24
698 877 8.349245 CGACATCCATATATCTTATCTGGACTC 58.651 40.741 4.35 2.88 38.74 3.36
699 878 7.286546 CCGACATCCATATATCTTATCTGGACT 59.713 40.741 4.35 0.00 38.74 3.85
701 880 6.551227 CCCGACATCCATATATCTTATCTGGA 59.449 42.308 4.65 4.65 40.12 3.86
702 881 6.739843 GCCCGACATCCATATATCTTATCTGG 60.740 46.154 0.00 0.00 0.00 3.86
703 882 6.183360 TGCCCGACATCCATATATCTTATCTG 60.183 42.308 0.00 0.00 0.00 2.90
704 883 5.899547 TGCCCGACATCCATATATCTTATCT 59.100 40.000 0.00 0.00 0.00 1.98
706 885 5.451937 CGTGCCCGACATCCATATATCTTAT 60.452 44.000 0.00 0.00 35.63 1.73
710 901 2.165641 TCGTGCCCGACATCCATATATC 59.834 50.000 0.00 0.00 38.40 1.63
714 905 0.753848 TCTCGTGCCCGACATCCATA 60.754 55.000 0.00 0.00 38.40 2.74
715 906 2.058001 TCTCGTGCCCGACATCCAT 61.058 57.895 0.00 0.00 38.40 3.41
729 920 3.432051 GACGGCCTCCCATGTCTCG 62.432 68.421 0.00 0.00 0.00 4.04
731 922 3.083997 GGACGGCCTCCCATGTCT 61.084 66.667 0.00 0.00 31.83 3.41
732 923 4.530857 CGGACGGCCTCCCATGTC 62.531 72.222 5.33 6.65 35.21 3.06
735 926 4.880426 ATCCGGACGGCCTCCCAT 62.880 66.667 6.12 5.47 35.21 4.00
784 975 2.384391 ATACGATCCGTGGACGCGTC 62.384 60.000 30.67 30.67 41.39 5.19
785 976 1.159713 TATACGATCCGTGGACGCGT 61.160 55.000 13.85 13.85 41.39 6.01
786 977 0.452287 CTATACGATCCGTGGACGCG 60.452 60.000 3.53 3.53 41.39 6.01
787 978 0.109873 CCTATACGATCCGTGGACGC 60.110 60.000 1.93 0.00 41.39 5.19
788 979 1.463831 CTCCTATACGATCCGTGGACG 59.536 57.143 1.93 8.62 41.39 4.79
789 980 1.811359 CCTCCTATACGATCCGTGGAC 59.189 57.143 1.93 0.00 41.39 4.02
816 1007 4.260375 GCATCATACAGCCGTACTTGAAAG 60.260 45.833 0.00 0.00 0.00 2.62
818 1009 3.118775 AGCATCATACAGCCGTACTTGAA 60.119 43.478 0.00 0.00 0.00 2.69
821 1012 2.695666 AGAGCATCATACAGCCGTACTT 59.304 45.455 0.00 0.00 37.82 2.24
822 1013 2.311463 AGAGCATCATACAGCCGTACT 58.689 47.619 0.00 0.00 37.82 2.73
823 1014 2.802787 AGAGCATCATACAGCCGTAC 57.197 50.000 0.00 0.00 37.82 3.67
825 1016 2.430694 TGTTAGAGCATCATACAGCCGT 59.569 45.455 0.00 0.00 37.82 5.68
826 1017 2.797156 GTGTTAGAGCATCATACAGCCG 59.203 50.000 0.00 0.00 37.82 5.52
827 1018 3.557595 GTGTGTTAGAGCATCATACAGCC 59.442 47.826 0.00 0.00 37.82 4.85
829 1020 4.122776 GGGTGTGTTAGAGCATCATACAG 58.877 47.826 0.00 0.00 37.82 2.74
830 1021 3.430236 CGGGTGTGTTAGAGCATCATACA 60.430 47.826 0.00 0.00 37.82 2.29
831 1022 3.123804 CGGGTGTGTTAGAGCATCATAC 58.876 50.000 0.00 0.00 37.82 2.39
832 1023 3.028130 TCGGGTGTGTTAGAGCATCATA 58.972 45.455 0.00 0.00 37.82 2.15
833 1024 1.831106 TCGGGTGTGTTAGAGCATCAT 59.169 47.619 0.00 0.00 37.82 2.45
834 1025 1.262417 TCGGGTGTGTTAGAGCATCA 58.738 50.000 0.00 0.00 37.82 3.07
835 1026 2.380084 TTCGGGTGTGTTAGAGCATC 57.620 50.000 0.00 0.00 0.00 3.91
836 1027 2.851263 TTTCGGGTGTGTTAGAGCAT 57.149 45.000 0.00 0.00 0.00 3.79
837 1028 2.037902 TCATTTCGGGTGTGTTAGAGCA 59.962 45.455 0.00 0.00 0.00 4.26
897 1091 0.318120 CAAGTGACAATGGGGTTGGC 59.682 55.000 0.00 0.00 46.61 4.52
964 1556 1.584724 GGAGGATGGAACTGGGAAGA 58.415 55.000 0.00 0.00 0.00 2.87
975 1568 3.023116 TGGGCTTGGGGAGGATGG 61.023 66.667 0.00 0.00 0.00 3.51
1024 1620 1.960689 GACCAGGAGGAGTATGAGAGC 59.039 57.143 0.00 0.00 38.69 4.09
1399 2001 0.686769 GATCGGTGTCCCTAGGTGGT 60.687 60.000 8.29 0.00 0.00 4.16
1432 2034 2.133520 AGCAGGTTGGATGAGGATGAT 58.866 47.619 0.00 0.00 0.00 2.45
1436 2038 0.833287 GCTAGCAGGTTGGATGAGGA 59.167 55.000 10.63 0.00 0.00 3.71
1439 2041 1.279496 ACAGCTAGCAGGTTGGATGA 58.721 50.000 18.83 0.00 0.00 2.92
1440 2042 2.119801 AACAGCTAGCAGGTTGGATG 57.880 50.000 18.83 6.13 0.00 3.51
1441 2043 2.887151 AAACAGCTAGCAGGTTGGAT 57.113 45.000 20.97 7.19 0.00 3.41
1442 2044 2.504367 GAAAACAGCTAGCAGGTTGGA 58.496 47.619 20.97 0.00 0.00 3.53
1443 2045 1.197721 CGAAAACAGCTAGCAGGTTGG 59.802 52.381 20.97 9.49 0.00 3.77
1512 2124 4.467769 AGCTATATCTGCAGTGCCATTTT 58.532 39.130 14.67 0.00 0.00 1.82
1567 2179 5.560183 CGACAGTACCCAAAAGAATTGACAC 60.560 44.000 0.00 0.00 0.00 3.67
1649 2262 1.956297 TTCGTTTCCGCAGAAAAGGA 58.044 45.000 8.23 0.00 43.48 3.36
1666 2284 4.205323 ACGAGTCAACACCGAAATTTTC 57.795 40.909 0.00 0.00 0.00 2.29
1676 2294 1.202132 TGCTTTGCAACGAGTCAACAC 60.202 47.619 7.19 0.00 34.76 3.32
1748 2370 0.537143 TTCTTGGGTGCGTGCAAGAT 60.537 50.000 2.99 0.00 34.22 2.40
1842 2464 1.889545 TCAAATGACCATGCACGACA 58.110 45.000 0.00 0.00 0.00 4.35
1843 2465 2.789208 CATCAAATGACCATGCACGAC 58.211 47.619 0.00 0.00 0.00 4.34
2029 2655 1.271597 GCACTGGTCATTCTCCCTTGT 60.272 52.381 0.00 0.00 0.00 3.16
2081 2717 4.499696 CGCACATCTGATGTAGTGGTATCA 60.500 45.833 21.88 0.00 42.70 2.15
2132 2768 2.421424 GTCCAGTCCAAATCTGATGTGC 59.579 50.000 2.10 0.00 35.20 4.57
2179 2815 3.951655 CTTGATTGCGCGGTGTGGC 62.952 63.158 8.83 0.00 0.00 5.01
2220 2857 0.955428 CGCTGCCACTCTTGCCTAAA 60.955 55.000 0.00 0.00 0.00 1.85
2272 2909 4.558496 CGCTCTTTTCTCCTAGCCAGATAG 60.558 50.000 0.00 0.00 0.00 2.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.