Multiple sequence alignment - TraesCS4D01G117800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G117800 chr4D 100.000 3788 0 0 1 3788 98441386 98445173 0.000000e+00 6996.0
1 TraesCS4D01G117800 chr4D 93.902 82 5 0 3238 3319 125783649 125783730 1.430000e-24 124.0
2 TraesCS4D01G117800 chr4D 97.778 45 1 0 3192 3236 202347937 202347981 1.130000e-10 78.7
3 TraesCS4D01G117800 chr4A 96.712 1612 36 7 1633 3234 477887735 477886131 0.000000e+00 2667.0
4 TraesCS4D01G117800 chr4A 93.927 988 47 8 310 1286 477888891 477887906 0.000000e+00 1480.0
5 TraesCS4D01G117800 chr4A 93.902 82 5 0 1554 1635 477887897 477887816 1.430000e-24 124.0
6 TraesCS4D01G117800 chr4A 88.406 69 6 2 3169 3236 219177168 219177235 8.720000e-12 82.4
7 TraesCS4D01G117800 chr4B 90.088 1584 107 25 1672 3236 139754276 139755828 0.000000e+00 2010.0
8 TraesCS4D01G117800 chr4B 89.210 899 44 14 291 1166 139752980 139753848 0.000000e+00 1074.0
9 TraesCS4D01G117800 chr4B 89.076 119 13 0 1166 1284 139753951 139754069 8.480000e-32 148.0
10 TraesCS4D01G117800 chr4B 90.476 42 3 1 246 287 1766456 1766496 2.000000e-03 54.7
11 TraesCS4D01G117800 chr5D 86.492 533 68 3 3240 3770 175536578 175536048 1.960000e-162 582.0
12 TraesCS4D01G117800 chr5D 92.453 265 14 5 1294 1555 256469795 256469534 1.280000e-99 374.0
13 TraesCS4D01G117800 chr1D 86.188 543 70 5 3238 3777 231404578 231405118 1.960000e-162 582.0
14 TraesCS4D01G117800 chr1D 88.085 470 53 2 3305 3772 223774382 223773914 4.280000e-154 555.0
15 TraesCS4D01G117800 chr6D 88.025 476 55 2 3305 3778 48675234 48674759 2.550000e-156 562.0
16 TraesCS4D01G117800 chr6D 88.075 478 49 6 3305 3777 124737484 124737010 9.190000e-156 560.0
17 TraesCS4D01G117800 chr6D 88.009 467 51 4 3305 3768 40770051 40770515 7.150000e-152 547.0
18 TraesCS4D01G117800 chr3A 88.161 473 53 2 3305 3775 421007664 421008135 9.190000e-156 560.0
19 TraesCS4D01G117800 chr7A 87.605 476 55 3 3305 3778 525516169 525515696 1.990000e-152 549.0
20 TraesCS4D01G117800 chr7A 87.579 475 56 2 3305 3776 512187367 512186893 7.150000e-152 547.0
21 TraesCS4D01G117800 chr7A 92.105 266 18 2 1290 1553 503428551 503428815 4.620000e-99 372.0
22 TraesCS4D01G117800 chr7A 91.566 83 7 0 3237 3319 471781731 471781649 8.600000e-22 115.0
23 TraesCS4D01G117800 chr1A 93.040 273 7 5 1290 1553 292773807 292774076 4.590000e-104 388.0
24 TraesCS4D01G117800 chr1A 91.209 273 21 2 1290 1560 208894160 208893889 5.980000e-98 368.0
25 TraesCS4D01G117800 chr1A 87.931 58 5 2 3179 3236 292081921 292081976 2.440000e-07 67.6
26 TraesCS4D01G117800 chr1A 90.476 42 4 0 246 287 20912624 20912665 5.290000e-04 56.5
27 TraesCS4D01G117800 chr5B 92.884 267 14 4 1290 1553 299731040 299731304 2.130000e-102 383.0
28 TraesCS4D01G117800 chr5B 92.135 267 19 2 1288 1553 78729920 78729655 3.570000e-100 375.0
29 TraesCS4D01G117800 chr7B 92.481 266 16 2 1290 1553 446166481 446166218 9.930000e-101 377.0
30 TraesCS4D01G117800 chr1B 91.636 275 17 5 1290 1560 231648539 231648811 3.570000e-100 375.0
31 TraesCS4D01G117800 chr1B 97.778 45 1 0 3192 3236 325813932 325813888 1.130000e-10 78.7
32 TraesCS4D01G117800 chr2A 92.105 266 17 3 1290 1553 522518746 522519009 4.620000e-99 372.0
33 TraesCS4D01G117800 chr2A 93.827 81 5 0 3239 3319 778726291 778726211 5.140000e-24 122.0
34 TraesCS4D01G117800 chr2A 92.683 82 6 0 3238 3319 64311928 64312009 6.650000e-23 119.0
35 TraesCS4D01G117800 chr6A 93.902 82 5 0 3238 3319 611336156 611336237 1.430000e-24 124.0
36 TraesCS4D01G117800 chr2D 93.902 82 5 0 3238 3319 282956654 282956573 1.430000e-24 124.0
37 TraesCS4D01G117800 chr2D 95.652 46 2 0 3190 3235 50404547 50404592 1.460000e-09 75.0
38 TraesCS4D01G117800 chr7D 94.805 77 4 0 3240 3316 4248805 4248881 1.850000e-23 121.0
39 TraesCS4D01G117800 chr3D 84.058 69 9 2 3169 3236 201318714 201318647 8.780000e-07 65.8
40 TraesCS4D01G117800 chr3D 90.698 43 4 0 245 287 53784260 53784218 1.470000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G117800 chr4D 98441386 98445173 3787 False 6996.000000 6996 100.000 1 3788 1 chr4D.!!$F1 3787
1 TraesCS4D01G117800 chr4A 477886131 477888891 2760 True 1423.666667 2667 94.847 310 3234 3 chr4A.!!$R1 2924
2 TraesCS4D01G117800 chr4B 139752980 139755828 2848 False 1077.333333 2010 89.458 291 3236 3 chr4B.!!$F2 2945
3 TraesCS4D01G117800 chr5D 175536048 175536578 530 True 582.000000 582 86.492 3240 3770 1 chr5D.!!$R1 530
4 TraesCS4D01G117800 chr1D 231404578 231405118 540 False 582.000000 582 86.188 3238 3777 1 chr1D.!!$F1 539

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
279 280 0.170116 CAACGCACGGGCATTTGTAT 59.830 50.0 11.77 0.0 41.24 2.29 F
1505 1637 0.097674 GCTTCATGCACTAGCCAACG 59.902 55.0 5.46 0.0 42.31 4.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1517 1649 0.035056 AGCCCTTTCCATCAGTTCGG 60.035 55.0 0.0 0.0 0.0 4.30 R
3132 3369 0.395862 TTCAACGGCAAAGGGGACAA 60.396 50.0 0.0 0.0 0.0 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.790861 TCTTTTTCGTTTCTGTTTTGTTCTC 57.209 32.000 0.00 0.00 0.00 2.87
25 26 6.804783 TCTTTTTCGTTTCTGTTTTGTTCTCC 59.195 34.615 0.00 0.00 0.00 3.71
26 27 5.890424 TTTCGTTTCTGTTTTGTTCTCCT 57.110 34.783 0.00 0.00 0.00 3.69
27 28 5.890424 TTCGTTTCTGTTTTGTTCTCCTT 57.110 34.783 0.00 0.00 0.00 3.36
28 29 5.890424 TCGTTTCTGTTTTGTTCTCCTTT 57.110 34.783 0.00 0.00 0.00 3.11
29 30 6.988622 TCGTTTCTGTTTTGTTCTCCTTTA 57.011 33.333 0.00 0.00 0.00 1.85
30 31 7.380431 TCGTTTCTGTTTTGTTCTCCTTTAA 57.620 32.000 0.00 0.00 0.00 1.52
31 32 7.818642 TCGTTTCTGTTTTGTTCTCCTTTAAA 58.181 30.769 0.00 0.00 0.00 1.52
32 33 8.463607 TCGTTTCTGTTTTGTTCTCCTTTAAAT 58.536 29.630 0.00 0.00 0.00 1.40
33 34 9.724839 CGTTTCTGTTTTGTTCTCCTTTAAATA 57.275 29.630 0.00 0.00 0.00 1.40
171 172 8.530269 AAAAATGTTTGCAATTTTTGAAGCAA 57.470 23.077 17.05 0.00 44.36 3.91
172 173 8.705048 AAAATGTTTGCAATTTTTGAAGCAAT 57.295 23.077 0.00 0.00 45.23 3.56
173 174 8.705048 AAATGTTTGCAATTTTTGAAGCAATT 57.295 23.077 0.00 0.00 45.23 2.32
174 175 8.705048 AATGTTTGCAATTTTTGAAGCAATTT 57.295 23.077 0.00 0.00 45.23 1.82
175 176 8.705048 ATGTTTGCAATTTTTGAAGCAATTTT 57.295 23.077 0.00 0.00 45.23 1.82
176 177 8.530269 TGTTTGCAATTTTTGAAGCAATTTTT 57.470 23.077 0.00 0.00 45.23 1.94
237 238 8.853126 AGCATAACATGATACATAAAGCATGTT 58.147 29.630 20.12 20.12 46.01 2.71
238 239 8.908678 GCATAACATGATACATAAAGCATGTTG 58.091 33.333 23.32 13.68 46.01 3.33
239 240 9.955208 CATAACATGATACATAAAGCATGTTGT 57.045 29.630 23.32 17.02 46.01 3.32
240 241 9.955208 ATAACATGATACATAAAGCATGTTGTG 57.045 29.630 23.32 0.28 46.01 3.33
252 253 3.149436 CATGTTGTGCCCCTTTTATCG 57.851 47.619 0.00 0.00 0.00 2.92
253 254 0.885196 TGTTGTGCCCCTTTTATCGC 59.115 50.000 0.00 0.00 0.00 4.58
254 255 0.172578 GTTGTGCCCCTTTTATCGCC 59.827 55.000 0.00 0.00 0.00 5.54
255 256 0.968393 TTGTGCCCCTTTTATCGCCC 60.968 55.000 0.00 0.00 0.00 6.13
256 257 2.124487 TGCCCCTTTTATCGCCCG 60.124 61.111 0.00 0.00 0.00 6.13
257 258 2.191109 GCCCCTTTTATCGCCCGA 59.809 61.111 0.00 0.00 0.00 5.14
258 259 1.452470 GCCCCTTTTATCGCCCGAA 60.452 57.895 0.00 0.00 0.00 4.30
259 260 1.444917 GCCCCTTTTATCGCCCGAAG 61.445 60.000 0.00 0.00 0.00 3.79
260 261 1.444917 CCCCTTTTATCGCCCGAAGC 61.445 60.000 0.00 0.00 38.52 3.86
261 262 0.746563 CCCTTTTATCGCCCGAAGCA 60.747 55.000 0.00 0.00 44.04 3.91
262 263 1.091537 CCTTTTATCGCCCGAAGCAA 58.908 50.000 0.00 0.00 44.04 3.91
263 264 1.202143 CCTTTTATCGCCCGAAGCAAC 60.202 52.381 0.00 0.00 44.04 4.17
264 265 0.444651 TTTTATCGCCCGAAGCAACG 59.555 50.000 0.00 0.00 44.04 4.10
265 266 1.973137 TTTATCGCCCGAAGCAACGC 61.973 55.000 0.00 0.00 44.04 4.84
266 267 3.650907 TATCGCCCGAAGCAACGCA 62.651 57.895 0.00 0.00 44.04 5.24
273 274 3.737172 GAAGCAACGCACGGGCAT 61.737 61.111 11.77 0.00 41.24 4.40
274 275 3.267597 GAAGCAACGCACGGGCATT 62.268 57.895 11.77 0.00 41.24 3.56
275 276 2.747507 GAAGCAACGCACGGGCATTT 62.748 55.000 11.77 0.00 41.24 2.32
276 277 3.105157 GCAACGCACGGGCATTTG 61.105 61.111 11.77 13.80 41.24 2.32
277 278 2.334653 CAACGCACGGGCATTTGT 59.665 55.556 11.77 0.00 41.24 2.83
278 279 1.576920 CAACGCACGGGCATTTGTA 59.423 52.632 11.77 0.00 41.24 2.41
279 280 0.170116 CAACGCACGGGCATTTGTAT 59.830 50.000 11.77 0.00 41.24 2.29
280 281 0.885196 AACGCACGGGCATTTGTATT 59.115 45.000 11.77 0.00 41.24 1.89
281 282 1.740297 ACGCACGGGCATTTGTATTA 58.260 45.000 11.77 0.00 41.24 0.98
282 283 1.668751 ACGCACGGGCATTTGTATTAG 59.331 47.619 11.77 0.00 41.24 1.73
283 284 1.668751 CGCACGGGCATTTGTATTAGT 59.331 47.619 11.77 0.00 41.24 2.24
284 285 2.867368 CGCACGGGCATTTGTATTAGTA 59.133 45.455 11.77 0.00 41.24 1.82
285 286 3.496884 CGCACGGGCATTTGTATTAGTAT 59.503 43.478 11.77 0.00 41.24 2.12
286 287 4.687018 CGCACGGGCATTTGTATTAGTATA 59.313 41.667 11.77 0.00 41.24 1.47
287 288 5.389098 CGCACGGGCATTTGTATTAGTATAC 60.389 44.000 11.77 0.00 41.24 1.47
288 289 5.699458 GCACGGGCATTTGTATTAGTATACT 59.301 40.000 3.77 10.87 37.76 2.12
289 290 6.128634 GCACGGGCATTTGTATTAGTATACTC 60.129 42.308 9.12 0.00 37.76 2.59
461 466 1.882352 CGCCCTATTTAGCCCCATCAC 60.882 57.143 0.00 0.00 0.00 3.06
500 505 2.971915 GAGCACGCTATACACGATACAC 59.028 50.000 0.00 0.00 0.00 2.90
660 684 2.928732 GATTTCGGATCGCGGCGTC 61.929 63.158 22.90 17.63 0.00 5.19
728 755 2.479412 CTTCCCCGATCGATCCGCTC 62.479 65.000 18.66 0.00 0.00 5.03
800 828 2.280321 CCGGTCGGTTTCGTGGTT 60.280 61.111 0.55 0.00 37.69 3.67
822 850 1.015109 TTGCGTCGTTGGCTTTGTTA 58.985 45.000 0.00 0.00 0.00 2.41
911 940 1.081442 CCTTTCGTTTTCCTGCGGC 60.081 57.895 0.00 0.00 0.00 6.53
914 943 0.741915 TTTCGTTTTCCTGCGGCTTT 59.258 45.000 0.00 0.00 0.00 3.51
925 954 2.589014 CTGCGGCTTTCTGATCAAAAC 58.411 47.619 0.00 0.00 0.00 2.43
949 978 6.608405 ACTGATTGATGGATTTGCTAATTCCA 59.392 34.615 11.92 11.92 34.72 3.53
956 985 7.724951 TGATGGATTTGCTAATTCCATATGTGA 59.275 33.333 17.70 0.00 40.84 3.58
1008 1037 4.136511 TGTCGCGCGATGGGCTTA 62.137 61.111 37.03 7.80 39.38 3.09
1023 1052 1.475930 GGCTTAGGACTGAGATTGCCC 60.476 57.143 0.00 0.00 33.66 5.36
1028 1057 1.558756 AGGACTGAGATTGCCCTTCTG 59.441 52.381 0.00 0.00 0.00 3.02
1029 1058 1.280421 GGACTGAGATTGCCCTTCTGT 59.720 52.381 0.00 0.00 0.00 3.41
1047 1076 1.821753 TGTCTACTCCTCTTGCTGCTC 59.178 52.381 0.00 0.00 0.00 4.26
1060 1089 2.989253 TGCTCGTCAGCCTCGGAA 60.989 61.111 0.00 0.00 46.26 4.30
1061 1090 2.202676 GCTCGTCAGCCTCGGAAG 60.203 66.667 0.00 0.00 40.14 3.46
1117 1146 1.217689 CAGCCCCTTTCCAATCCCATA 59.782 52.381 0.00 0.00 0.00 2.74
1118 1147 2.155563 AGCCCCTTTCCAATCCCATAT 58.844 47.619 0.00 0.00 0.00 1.78
1119 1148 2.158264 AGCCCCTTTCCAATCCCATATG 60.158 50.000 0.00 0.00 0.00 1.78
1120 1149 2.158325 GCCCCTTTCCAATCCCATATGA 60.158 50.000 3.65 0.00 0.00 2.15
1121 1150 3.502857 GCCCCTTTCCAATCCCATATGAT 60.503 47.826 3.65 0.00 0.00 2.45
1122 1151 4.091549 CCCCTTTCCAATCCCATATGATG 58.908 47.826 3.65 0.00 0.00 3.07
1155 1184 8.189709 TGTTGTTCATTCATCTCTAAATCGAG 57.810 34.615 0.00 0.00 0.00 4.04
1286 1418 5.334646 CGTCCAATTGCTTCCATGATATCAG 60.335 44.000 11.78 3.67 0.00 2.90
1289 1421 7.229306 GTCCAATTGCTTCCATGATATCAGTTA 59.771 37.037 11.78 0.00 0.00 2.24
1290 1422 7.946219 TCCAATTGCTTCCATGATATCAGTTAT 59.054 33.333 11.78 0.00 0.00 1.89
1291 1423 8.027189 CCAATTGCTTCCATGATATCAGTTATG 58.973 37.037 11.78 4.40 0.00 1.90
1292 1424 8.789762 CAATTGCTTCCATGATATCAGTTATGA 58.210 33.333 11.78 0.57 40.50 2.15
1293 1425 8.929260 ATTGCTTCCATGATATCAGTTATGAA 57.071 30.769 11.78 7.94 39.39 2.57
1294 1426 8.750515 TTGCTTCCATGATATCAGTTATGAAA 57.249 30.769 11.78 0.05 39.39 2.69
1295 1427 8.750515 TGCTTCCATGATATCAGTTATGAAAA 57.249 30.769 11.78 2.60 39.39 2.29
1296 1428 8.843262 TGCTTCCATGATATCAGTTATGAAAAG 58.157 33.333 11.78 11.39 39.39 2.27
1297 1429 8.295288 GCTTCCATGATATCAGTTATGAAAAGG 58.705 37.037 11.78 1.05 39.39 3.11
1298 1430 8.696043 TTCCATGATATCAGTTATGAAAAGGG 57.304 34.615 11.78 0.00 39.39 3.95
1299 1431 6.716628 TCCATGATATCAGTTATGAAAAGGGC 59.283 38.462 11.78 0.00 39.39 5.19
1300 1432 6.718454 CCATGATATCAGTTATGAAAAGGGCT 59.282 38.462 11.78 0.00 39.39 5.19
1301 1433 7.884877 CCATGATATCAGTTATGAAAAGGGCTA 59.115 37.037 11.78 0.00 39.39 3.93
1302 1434 8.944029 CATGATATCAGTTATGAAAAGGGCTAG 58.056 37.037 11.78 0.00 39.39 3.42
1303 1435 8.034313 TGATATCAGTTATGAAAAGGGCTAGT 57.966 34.615 0.00 0.00 39.39 2.57
1304 1436 8.150945 TGATATCAGTTATGAAAAGGGCTAGTC 58.849 37.037 0.00 0.00 39.39 2.59
1305 1437 5.755409 TCAGTTATGAAAAGGGCTAGTCA 57.245 39.130 0.00 0.00 30.61 3.41
1306 1438 6.121776 TCAGTTATGAAAAGGGCTAGTCAA 57.878 37.500 0.00 0.00 30.61 3.18
1307 1439 6.721318 TCAGTTATGAAAAGGGCTAGTCAAT 58.279 36.000 0.00 0.00 30.61 2.57
1308 1440 6.823689 TCAGTTATGAAAAGGGCTAGTCAATC 59.176 38.462 0.00 0.00 30.61 2.67
1309 1441 6.038714 CAGTTATGAAAAGGGCTAGTCAATCC 59.961 42.308 0.00 0.00 0.00 3.01
1310 1442 4.591321 ATGAAAAGGGCTAGTCAATCCA 57.409 40.909 0.00 0.00 0.00 3.41
1311 1443 3.686016 TGAAAAGGGCTAGTCAATCCAC 58.314 45.455 0.00 0.00 0.00 4.02
1312 1444 3.073798 TGAAAAGGGCTAGTCAATCCACA 59.926 43.478 0.00 0.00 0.00 4.17
1313 1445 4.263905 TGAAAAGGGCTAGTCAATCCACAT 60.264 41.667 0.00 0.00 0.00 3.21
1314 1446 5.045213 TGAAAAGGGCTAGTCAATCCACATA 60.045 40.000 0.00 0.00 0.00 2.29
1315 1447 5.653255 AAAGGGCTAGTCAATCCACATAT 57.347 39.130 0.00 0.00 0.00 1.78
1316 1448 6.763715 AAAGGGCTAGTCAATCCACATATA 57.236 37.500 0.00 0.00 0.00 0.86
1317 1449 5.746990 AGGGCTAGTCAATCCACATATAC 57.253 43.478 0.00 0.00 0.00 1.47
1318 1450 5.155161 AGGGCTAGTCAATCCACATATACA 58.845 41.667 0.00 0.00 0.00 2.29
1319 1451 5.012148 AGGGCTAGTCAATCCACATATACAC 59.988 44.000 0.00 0.00 0.00 2.90
1320 1452 5.012148 GGGCTAGTCAATCCACATATACACT 59.988 44.000 0.00 0.00 0.00 3.55
1321 1453 6.464465 GGGCTAGTCAATCCACATATACACTT 60.464 42.308 0.00 0.00 0.00 3.16
1322 1454 6.647067 GGCTAGTCAATCCACATATACACTTC 59.353 42.308 0.00 0.00 0.00 3.01
1323 1455 7.210174 GCTAGTCAATCCACATATACACTTCA 58.790 38.462 0.00 0.00 0.00 3.02
1324 1456 7.710907 GCTAGTCAATCCACATATACACTTCAA 59.289 37.037 0.00 0.00 0.00 2.69
1325 1457 7.849804 AGTCAATCCACATATACACTTCAAC 57.150 36.000 0.00 0.00 0.00 3.18
1326 1458 7.394016 AGTCAATCCACATATACACTTCAACA 58.606 34.615 0.00 0.00 0.00 3.33
1327 1459 7.334421 AGTCAATCCACATATACACTTCAACAC 59.666 37.037 0.00 0.00 0.00 3.32
1328 1460 6.597672 TCAATCCACATATACACTTCAACACC 59.402 38.462 0.00 0.00 0.00 4.16
1329 1461 4.839121 TCCACATATACACTTCAACACCC 58.161 43.478 0.00 0.00 0.00 4.61
1330 1462 4.534500 TCCACATATACACTTCAACACCCT 59.466 41.667 0.00 0.00 0.00 4.34
1331 1463 4.876107 CCACATATACACTTCAACACCCTC 59.124 45.833 0.00 0.00 0.00 4.30
1332 1464 5.338381 CCACATATACACTTCAACACCCTCT 60.338 44.000 0.00 0.00 0.00 3.69
1333 1465 5.812642 CACATATACACTTCAACACCCTCTC 59.187 44.000 0.00 0.00 0.00 3.20
1334 1466 5.483937 ACATATACACTTCAACACCCTCTCA 59.516 40.000 0.00 0.00 0.00 3.27
1335 1467 2.622064 ACACTTCAACACCCTCTCAC 57.378 50.000 0.00 0.00 0.00 3.51
1336 1468 1.202533 ACACTTCAACACCCTCTCACG 60.203 52.381 0.00 0.00 0.00 4.35
1337 1469 1.120530 ACTTCAACACCCTCTCACGT 58.879 50.000 0.00 0.00 0.00 4.49
1338 1470 1.202533 ACTTCAACACCCTCTCACGTG 60.203 52.381 9.94 9.94 36.04 4.49
1339 1471 0.828022 TTCAACACCCTCTCACGTGT 59.172 50.000 16.51 0.00 44.95 4.49
1340 1472 0.104120 TCAACACCCTCTCACGTGTG 59.896 55.000 16.51 13.78 42.28 3.82
1341 1473 0.104120 CAACACCCTCTCACGTGTGA 59.896 55.000 18.43 18.43 42.28 3.58
1342 1474 0.104304 AACACCCTCTCACGTGTGAC 59.896 55.000 16.51 0.00 42.28 3.67
1352 1484 2.844146 CGTGTGACGCGGAAAGTC 59.156 61.111 12.47 0.00 38.98 3.01
1353 1485 1.947146 CGTGTGACGCGGAAAGTCA 60.947 57.895 12.47 0.61 45.23 3.41
1356 1488 4.838046 TGACGCGGAAAGTCAACA 57.162 50.000 12.47 0.00 44.56 3.33
1357 1489 2.303452 TGACGCGGAAAGTCAACAC 58.697 52.632 12.47 0.00 44.56 3.32
1358 1490 1.200839 GACGCGGAAAGTCAACACG 59.799 57.895 12.47 0.00 38.42 4.49
1359 1491 1.485032 GACGCGGAAAGTCAACACGT 61.485 55.000 12.47 0.00 38.42 4.49
1360 1492 1.083657 CGCGGAAAGTCAACACGTG 60.084 57.895 15.48 15.48 0.00 4.49
1361 1493 1.278637 GCGGAAAGTCAACACGTGG 59.721 57.895 21.57 2.57 0.00 4.94
1362 1494 1.155424 GCGGAAAGTCAACACGTGGA 61.155 55.000 21.57 5.36 0.00 4.02
1363 1495 1.508632 CGGAAAGTCAACACGTGGAT 58.491 50.000 21.57 5.28 0.00 3.41
1364 1496 2.679450 CGGAAAGTCAACACGTGGATA 58.321 47.619 21.57 0.71 0.00 2.59
1365 1497 2.666508 CGGAAAGTCAACACGTGGATAG 59.333 50.000 21.57 6.49 0.00 2.08
1366 1498 3.613193 CGGAAAGTCAACACGTGGATAGA 60.613 47.826 21.57 8.86 0.00 1.98
1367 1499 3.678548 GGAAAGTCAACACGTGGATAGAC 59.321 47.826 21.57 19.46 0.00 2.59
1368 1500 4.557205 GAAAGTCAACACGTGGATAGACT 58.443 43.478 21.57 21.20 37.90 3.24
1369 1501 3.851976 AGTCAACACGTGGATAGACTC 57.148 47.619 21.57 1.98 31.19 3.36
1370 1502 3.154710 AGTCAACACGTGGATAGACTCA 58.845 45.455 21.57 0.00 31.19 3.41
1371 1503 3.191581 AGTCAACACGTGGATAGACTCAG 59.808 47.826 21.57 0.00 31.19 3.35
1372 1504 3.190744 GTCAACACGTGGATAGACTCAGA 59.809 47.826 21.57 0.00 0.00 3.27
1373 1505 3.440522 TCAACACGTGGATAGACTCAGAG 59.559 47.826 21.57 0.00 0.00 3.35
1374 1506 2.370349 ACACGTGGATAGACTCAGAGG 58.630 52.381 21.57 0.00 0.00 3.69
1375 1507 2.291024 ACACGTGGATAGACTCAGAGGT 60.291 50.000 21.57 0.00 0.00 3.85
1376 1508 3.054582 ACACGTGGATAGACTCAGAGGTA 60.055 47.826 21.57 0.00 0.00 3.08
1377 1509 4.138290 CACGTGGATAGACTCAGAGGTAT 58.862 47.826 7.95 0.00 0.00 2.73
1378 1510 4.023622 CACGTGGATAGACTCAGAGGTATG 60.024 50.000 7.95 0.00 0.00 2.39
1379 1511 3.504134 CGTGGATAGACTCAGAGGTATGG 59.496 52.174 1.53 0.00 0.00 2.74
1380 1512 3.257127 GTGGATAGACTCAGAGGTATGGC 59.743 52.174 1.53 0.00 0.00 4.40
1381 1513 3.141083 TGGATAGACTCAGAGGTATGGCT 59.859 47.826 1.53 0.00 0.00 4.75
1382 1514 3.761752 GGATAGACTCAGAGGTATGGCTC 59.238 52.174 1.53 0.00 0.00 4.70
1383 1515 2.836636 AGACTCAGAGGTATGGCTCA 57.163 50.000 1.53 0.00 0.00 4.26
1384 1516 3.107402 AGACTCAGAGGTATGGCTCAA 57.893 47.619 1.53 0.00 0.00 3.02
1385 1517 3.030291 AGACTCAGAGGTATGGCTCAAG 58.970 50.000 1.53 0.00 0.00 3.02
1386 1518 3.027412 GACTCAGAGGTATGGCTCAAGA 58.973 50.000 1.53 0.00 0.00 3.02
1387 1519 3.030291 ACTCAGAGGTATGGCTCAAGAG 58.970 50.000 1.53 0.00 33.37 2.85
1388 1520 2.364970 CTCAGAGGTATGGCTCAAGAGG 59.635 54.545 0.00 0.00 0.00 3.69
1389 1521 1.415659 CAGAGGTATGGCTCAAGAGGG 59.584 57.143 0.00 0.00 0.00 4.30
1390 1522 0.107643 GAGGTATGGCTCAAGAGGGC 59.892 60.000 0.00 0.00 0.00 5.19
1391 1523 0.327000 AGGTATGGCTCAAGAGGGCT 60.327 55.000 0.00 0.00 0.00 5.19
1392 1524 1.062121 AGGTATGGCTCAAGAGGGCTA 60.062 52.381 0.00 0.00 0.00 3.93
1393 1525 1.981495 GGTATGGCTCAAGAGGGCTAT 59.019 52.381 0.00 0.00 34.27 2.97
1394 1526 3.173965 GGTATGGCTCAAGAGGGCTATA 58.826 50.000 0.00 0.00 32.26 1.31
1395 1527 3.777522 GGTATGGCTCAAGAGGGCTATAT 59.222 47.826 0.00 0.00 35.16 0.86
1396 1528 3.996921 ATGGCTCAAGAGGGCTATATG 57.003 47.619 0.00 0.00 0.00 1.78
1397 1529 2.694397 TGGCTCAAGAGGGCTATATGT 58.306 47.619 0.00 0.00 0.00 2.29
1398 1530 3.048600 TGGCTCAAGAGGGCTATATGTT 58.951 45.455 0.00 0.00 0.00 2.71
1399 1531 3.181451 TGGCTCAAGAGGGCTATATGTTG 60.181 47.826 0.00 0.00 0.00 3.33
1400 1532 3.071602 GGCTCAAGAGGGCTATATGTTGA 59.928 47.826 0.00 0.00 0.00 3.18
1401 1533 4.061596 GCTCAAGAGGGCTATATGTTGAC 58.938 47.826 0.00 0.00 0.00 3.18
1402 1534 4.443457 GCTCAAGAGGGCTATATGTTGACA 60.443 45.833 0.00 0.00 0.00 3.58
1403 1535 5.744300 GCTCAAGAGGGCTATATGTTGACAT 60.744 44.000 1.84 1.84 40.22 3.06
1404 1536 6.519043 GCTCAAGAGGGCTATATGTTGACATA 60.519 42.308 6.32 6.32 42.38 2.29
1405 1537 6.997655 TCAAGAGGGCTATATGTTGACATAG 58.002 40.000 9.45 0.76 41.58 2.23
1406 1538 6.782494 TCAAGAGGGCTATATGTTGACATAGA 59.218 38.462 9.45 4.49 41.58 1.98
1407 1539 7.290014 TCAAGAGGGCTATATGTTGACATAGAA 59.710 37.037 9.45 0.87 41.58 2.10
1408 1540 7.238486 AGAGGGCTATATGTTGACATAGAAG 57.762 40.000 9.45 9.75 41.58 2.85
1409 1541 6.212388 AGAGGGCTATATGTTGACATAGAAGG 59.788 42.308 9.45 0.00 41.58 3.46
1410 1542 5.249393 AGGGCTATATGTTGACATAGAAGGG 59.751 44.000 9.45 0.00 41.58 3.95
1411 1543 5.491982 GGCTATATGTTGACATAGAAGGGG 58.508 45.833 9.45 0.00 41.58 4.79
1412 1544 4.938226 GCTATATGTTGACATAGAAGGGGC 59.062 45.833 9.45 2.15 41.58 5.80
1413 1545 5.513094 GCTATATGTTGACATAGAAGGGGCA 60.513 44.000 9.45 0.00 41.58 5.36
1414 1546 3.737559 ATGTTGACATAGAAGGGGCAA 57.262 42.857 0.00 0.00 34.26 4.52
1415 1547 2.790433 TGTTGACATAGAAGGGGCAAC 58.210 47.619 3.50 3.50 36.92 4.17
1416 1548 2.107378 TGTTGACATAGAAGGGGCAACA 59.893 45.455 8.84 8.84 42.03 3.33
1417 1549 2.749621 GTTGACATAGAAGGGGCAACAG 59.250 50.000 5.54 0.00 36.54 3.16
1418 1550 1.340017 TGACATAGAAGGGGCAACAGC 60.340 52.381 0.00 0.00 39.74 4.40
1419 1551 0.698238 ACATAGAAGGGGCAACAGCA 59.302 50.000 0.00 0.00 39.74 4.41
1420 1552 1.075374 ACATAGAAGGGGCAACAGCAA 59.925 47.619 0.00 0.00 39.74 3.91
1421 1553 2.291800 ACATAGAAGGGGCAACAGCAAT 60.292 45.455 0.00 0.00 39.74 3.56
1422 1554 2.603075 TAGAAGGGGCAACAGCAATT 57.397 45.000 0.00 0.00 39.74 2.32
1423 1555 1.720781 AGAAGGGGCAACAGCAATTT 58.279 45.000 0.00 0.00 39.74 1.82
1424 1556 2.049372 AGAAGGGGCAACAGCAATTTT 58.951 42.857 0.00 0.00 39.74 1.82
1425 1557 2.439135 AGAAGGGGCAACAGCAATTTTT 59.561 40.909 0.00 0.00 39.74 1.94
1456 1588 1.884235 CGAAAGCCAGGACTTGAACT 58.116 50.000 0.00 0.00 0.00 3.01
1457 1589 1.801178 CGAAAGCCAGGACTTGAACTC 59.199 52.381 0.00 0.00 0.00 3.01
1458 1590 2.806745 CGAAAGCCAGGACTTGAACTCA 60.807 50.000 0.00 0.00 0.00 3.41
1459 1591 3.214328 GAAAGCCAGGACTTGAACTCAA 58.786 45.455 0.00 0.00 0.00 3.02
1470 1602 3.418684 TTGAACTCAAGACCTTAGGCC 57.581 47.619 0.00 0.00 0.00 5.19
1471 1603 1.628846 TGAACTCAAGACCTTAGGCCC 59.371 52.381 0.00 0.00 0.00 5.80
1472 1604 1.909986 GAACTCAAGACCTTAGGCCCT 59.090 52.381 0.00 0.00 0.00 5.19
1473 1605 1.280457 ACTCAAGACCTTAGGCCCTG 58.720 55.000 0.00 0.00 0.00 4.45
1474 1606 1.203313 ACTCAAGACCTTAGGCCCTGA 60.203 52.381 0.00 0.00 0.00 3.86
1475 1607 2.122768 CTCAAGACCTTAGGCCCTGAT 58.877 52.381 0.00 0.00 0.00 2.90
1476 1608 3.309296 CTCAAGACCTTAGGCCCTGATA 58.691 50.000 0.00 0.00 0.00 2.15
1477 1609 3.039011 TCAAGACCTTAGGCCCTGATAC 58.961 50.000 0.00 0.00 0.00 2.24
1478 1610 2.104669 AGACCTTAGGCCCTGATACC 57.895 55.000 0.00 0.00 0.00 2.73
1479 1611 1.294068 AGACCTTAGGCCCTGATACCA 59.706 52.381 0.00 0.00 0.00 3.25
1480 1612 2.124411 GACCTTAGGCCCTGATACCAA 58.876 52.381 0.00 0.00 0.00 3.67
1481 1613 2.104963 GACCTTAGGCCCTGATACCAAG 59.895 54.545 0.00 0.00 0.00 3.61
1482 1614 2.127708 CCTTAGGCCCTGATACCAAGT 58.872 52.381 0.00 0.00 0.00 3.16
1483 1615 2.509964 CCTTAGGCCCTGATACCAAGTT 59.490 50.000 0.00 0.00 0.00 2.66
1484 1616 3.714798 CCTTAGGCCCTGATACCAAGTTA 59.285 47.826 0.00 0.00 0.00 2.24
1485 1617 4.165372 CCTTAGGCCCTGATACCAAGTTAA 59.835 45.833 0.00 0.00 0.00 2.01
1486 1618 3.933861 AGGCCCTGATACCAAGTTAAG 57.066 47.619 0.00 0.00 0.00 1.85
1487 1619 2.092375 AGGCCCTGATACCAAGTTAAGC 60.092 50.000 0.00 0.00 0.00 3.09
1488 1620 2.092375 GGCCCTGATACCAAGTTAAGCT 60.092 50.000 0.00 0.00 0.00 3.74
1489 1621 3.621558 GCCCTGATACCAAGTTAAGCTT 58.378 45.455 3.48 3.48 38.08 3.74
1490 1622 3.628032 GCCCTGATACCAAGTTAAGCTTC 59.372 47.826 0.00 0.00 34.69 3.86
1491 1623 4.843728 CCCTGATACCAAGTTAAGCTTCA 58.156 43.478 0.00 0.00 34.69 3.02
1492 1624 5.440610 CCCTGATACCAAGTTAAGCTTCAT 58.559 41.667 0.00 0.00 34.69 2.57
1493 1625 5.297776 CCCTGATACCAAGTTAAGCTTCATG 59.702 44.000 0.00 0.00 34.69 3.07
1494 1626 5.220931 CCTGATACCAAGTTAAGCTTCATGC 60.221 44.000 0.00 0.00 43.29 4.06
1495 1627 5.252547 TGATACCAAGTTAAGCTTCATGCA 58.747 37.500 0.00 0.00 45.94 3.96
1496 1628 3.923017 ACCAAGTTAAGCTTCATGCAC 57.077 42.857 0.00 0.00 45.94 4.57
1497 1629 3.490348 ACCAAGTTAAGCTTCATGCACT 58.510 40.909 0.00 0.00 45.94 4.40
1498 1630 4.651778 ACCAAGTTAAGCTTCATGCACTA 58.348 39.130 0.00 0.00 45.94 2.74
1499 1631 4.697352 ACCAAGTTAAGCTTCATGCACTAG 59.303 41.667 0.00 0.00 45.94 2.57
1500 1632 4.437930 CCAAGTTAAGCTTCATGCACTAGC 60.438 45.833 0.00 8.13 45.94 3.42
1501 1633 3.274288 AGTTAAGCTTCATGCACTAGCC 58.726 45.455 0.00 0.00 45.94 3.93
1502 1634 3.009723 GTTAAGCTTCATGCACTAGCCA 58.990 45.455 0.00 0.00 45.94 4.75
1503 1635 2.205022 AAGCTTCATGCACTAGCCAA 57.795 45.000 11.63 0.00 45.94 4.52
1504 1636 1.457346 AGCTTCATGCACTAGCCAAC 58.543 50.000 11.63 0.00 45.94 3.77
1505 1637 0.097674 GCTTCATGCACTAGCCAACG 59.902 55.000 5.46 0.00 42.31 4.10
1506 1638 0.097674 CTTCATGCACTAGCCAACGC 59.902 55.000 0.00 0.00 41.13 4.84
1507 1639 0.605050 TTCATGCACTAGCCAACGCA 60.605 50.000 0.00 0.00 41.13 5.24
1508 1640 0.605050 TCATGCACTAGCCAACGCAA 60.605 50.000 0.00 0.00 41.13 4.85
1509 1641 0.454957 CATGCACTAGCCAACGCAAC 60.455 55.000 0.00 0.00 41.13 4.17
1510 1642 1.586154 ATGCACTAGCCAACGCAACC 61.586 55.000 0.00 0.00 41.13 3.77
1511 1643 2.258013 GCACTAGCCAACGCAACCA 61.258 57.895 0.00 0.00 37.52 3.67
1512 1644 1.791103 GCACTAGCCAACGCAACCAA 61.791 55.000 0.00 0.00 37.52 3.67
1513 1645 0.665835 CACTAGCCAACGCAACCAAA 59.334 50.000 0.00 0.00 37.52 3.28
1514 1646 1.066303 CACTAGCCAACGCAACCAAAA 59.934 47.619 0.00 0.00 37.52 2.44
1515 1647 1.336755 ACTAGCCAACGCAACCAAAAG 59.663 47.619 0.00 0.00 37.52 2.27
1516 1648 1.336755 CTAGCCAACGCAACCAAAAGT 59.663 47.619 0.00 0.00 37.52 2.66
1517 1649 0.102300 AGCCAACGCAACCAAAAGTC 59.898 50.000 0.00 0.00 37.52 3.01
1518 1650 0.874175 GCCAACGCAACCAAAAGTCC 60.874 55.000 0.00 0.00 34.03 3.85
1519 1651 0.593773 CCAACGCAACCAAAAGTCCG 60.594 55.000 0.00 0.00 0.00 4.79
1520 1652 0.378962 CAACGCAACCAAAAGTCCGA 59.621 50.000 0.00 0.00 0.00 4.55
1521 1653 1.096416 AACGCAACCAAAAGTCCGAA 58.904 45.000 0.00 0.00 0.00 4.30
1522 1654 0.379316 ACGCAACCAAAAGTCCGAAC 59.621 50.000 0.00 0.00 0.00 3.95
1523 1655 0.661020 CGCAACCAAAAGTCCGAACT 59.339 50.000 0.00 0.00 37.32 3.01
1524 1656 1.596954 CGCAACCAAAAGTCCGAACTG 60.597 52.381 0.00 0.00 35.36 3.16
1525 1657 1.673920 GCAACCAAAAGTCCGAACTGA 59.326 47.619 0.00 0.00 35.36 3.41
1526 1658 2.293399 GCAACCAAAAGTCCGAACTGAT 59.707 45.455 0.00 0.00 35.36 2.90
1527 1659 3.853307 GCAACCAAAAGTCCGAACTGATG 60.853 47.826 0.00 0.00 35.36 3.07
1528 1660 2.504367 ACCAAAAGTCCGAACTGATGG 58.496 47.619 4.80 4.80 43.11 3.51
1529 1661 2.105821 ACCAAAAGTCCGAACTGATGGA 59.894 45.455 12.23 0.00 41.39 3.41
1530 1662 3.146066 CCAAAAGTCCGAACTGATGGAA 58.854 45.455 0.36 0.00 41.39 3.53
1531 1663 3.568007 CCAAAAGTCCGAACTGATGGAAA 59.432 43.478 0.36 0.00 41.39 3.13
1532 1664 4.320494 CCAAAAGTCCGAACTGATGGAAAG 60.320 45.833 0.36 0.00 41.39 2.62
1533 1665 2.770164 AGTCCGAACTGATGGAAAGG 57.230 50.000 0.00 0.00 35.67 3.11
1534 1666 1.279271 AGTCCGAACTGATGGAAAGGG 59.721 52.381 0.00 0.00 35.67 3.95
1535 1667 0.035439 TCCGAACTGATGGAAAGGGC 60.035 55.000 0.00 0.00 0.00 5.19
1536 1668 0.035056 CCGAACTGATGGAAAGGGCT 60.035 55.000 0.00 0.00 0.00 5.19
1537 1669 1.209504 CCGAACTGATGGAAAGGGCTA 59.790 52.381 0.00 0.00 0.00 3.93
1538 1670 2.555199 CGAACTGATGGAAAGGGCTAG 58.445 52.381 0.00 0.00 0.00 3.42
1539 1671 2.743183 CGAACTGATGGAAAGGGCTAGG 60.743 54.545 0.00 0.00 0.00 3.02
1540 1672 0.548510 ACTGATGGAAAGGGCTAGGC 59.451 55.000 8.00 8.00 0.00 3.93
1541 1673 0.548031 CTGATGGAAAGGGCTAGGCA 59.452 55.000 19.14 0.00 0.00 4.75
1542 1674 0.998928 TGATGGAAAGGGCTAGGCAA 59.001 50.000 19.14 0.00 0.00 4.52
1543 1675 1.570501 TGATGGAAAGGGCTAGGCAAT 59.429 47.619 19.14 2.76 0.00 3.56
1544 1676 2.234143 GATGGAAAGGGCTAGGCAATC 58.766 52.381 19.14 11.99 0.00 2.67
1545 1677 0.258774 TGGAAAGGGCTAGGCAATCC 59.741 55.000 19.14 20.00 0.00 3.01
1546 1678 0.258774 GGAAAGGGCTAGGCAATCCA 59.741 55.000 19.14 0.00 33.74 3.41
1547 1679 1.393603 GAAAGGGCTAGGCAATCCAC 58.606 55.000 19.14 0.00 33.74 4.02
1548 1680 0.704076 AAAGGGCTAGGCAATCCACA 59.296 50.000 19.14 0.00 33.74 4.17
1549 1681 0.929244 AAGGGCTAGGCAATCCACAT 59.071 50.000 19.14 0.00 33.74 3.21
1550 1682 1.819753 AGGGCTAGGCAATCCACATA 58.180 50.000 19.14 0.00 33.74 2.29
1551 1683 2.352371 AGGGCTAGGCAATCCACATAT 58.648 47.619 19.14 0.00 33.74 1.78
1552 1684 3.531059 AGGGCTAGGCAATCCACATATA 58.469 45.455 19.14 0.00 33.74 0.86
1590 1722 9.573166 TGGTTGTATAAGGATAGAATTTGGATG 57.427 33.333 0.00 0.00 0.00 3.51
1592 1724 9.574516 GTTGTATAAGGATAGAATTTGGATGGT 57.425 33.333 0.00 0.00 0.00 3.55
1598 1730 6.479884 AGGATAGAATTTGGATGGTCTATGC 58.520 40.000 0.00 0.00 40.05 3.14
1806 2021 1.478105 GGCCCTGGTCAAATCATCAAC 59.522 52.381 0.00 0.00 0.00 3.18
1971 2186 4.888326 AGCTTGTTCTCAGACATTCTCT 57.112 40.909 0.00 0.00 0.00 3.10
1999 2214 8.347035 TGGAAAAGAAGGTAGTAATTTTGAACG 58.653 33.333 0.00 0.00 0.00 3.95
2006 2221 5.533528 AGGTAGTAATTTTGAACGCTTTGGT 59.466 36.000 0.00 0.00 0.00 3.67
2025 2240 5.266733 TGGTCTGTAATTCGGTACATACC 57.733 43.478 15.89 15.89 45.12 2.73
2409 2635 3.813724 GTCTTCACCTTTACCTTGTGTCC 59.186 47.826 0.00 0.00 0.00 4.02
2500 2726 2.542020 TCGAAGGTCATGAACAGCAA 57.458 45.000 14.46 0.00 0.00 3.91
2778 3009 2.954611 GAGGAGGGTTTGTTGCGC 59.045 61.111 0.00 0.00 0.00 6.09
2949 3181 2.859273 AAAGGGAGCGGCATGACGAG 62.859 60.000 28.68 0.00 35.47 4.18
3132 3369 4.081586 GGTCGGTGAAGAGGTAGATTTTCT 60.082 45.833 0.00 0.00 0.00 2.52
3163 3400 2.359214 TGCCGTTGAACATGCTAACAAA 59.641 40.909 8.07 0.00 0.00 2.83
3187 3424 3.053917 GGATTGCCCCTACCAAAGAGTTA 60.054 47.826 0.00 0.00 0.00 2.24
3189 3426 2.627933 TGCCCCTACCAAAGAGTTAGT 58.372 47.619 0.00 0.00 0.00 2.24
3261 3499 7.494922 AAGGGTTTTTATCATTTATGCCACT 57.505 32.000 0.00 0.00 0.00 4.00
3262 3500 8.602472 AAGGGTTTTTATCATTTATGCCACTA 57.398 30.769 0.00 0.00 0.00 2.74
3270 3508 8.574251 TTATCATTTATGCCACTAGTTGTGTT 57.426 30.769 4.03 0.00 44.81 3.32
3271 3509 6.252967 TCATTTATGCCACTAGTTGTGTTG 57.747 37.500 4.03 0.00 44.81 3.33
3277 3515 2.223377 GCCACTAGTTGTGTTGCACTAC 59.777 50.000 4.03 5.89 44.81 2.73
3279 3517 4.127171 CCACTAGTTGTGTTGCACTACTT 58.873 43.478 17.99 2.94 44.96 2.24
3303 3541 6.670695 AGTTTTGCCACTAGGAATTTCAAT 57.329 33.333 0.00 0.00 36.89 2.57
3304 3542 7.066307 AGTTTTGCCACTAGGAATTTCAATT 57.934 32.000 0.00 0.00 36.89 2.32
3326 3564 2.028748 GCTCAAAAATGCCACTGGACAT 60.029 45.455 0.00 0.00 0.00 3.06
3327 3565 3.555586 GCTCAAAAATGCCACTGGACATT 60.556 43.478 0.00 5.66 38.11 2.71
3332 3570 7.319646 TCAAAAATGCCACTGGACATTATTAC 58.680 34.615 14.43 0.00 35.49 1.89
3336 3574 4.513442 TGCCACTGGACATTATTACTGTC 58.487 43.478 0.00 5.79 41.83 3.51
3338 3576 4.572389 GCCACTGGACATTATTACTGTCAG 59.428 45.833 14.03 0.00 43.85 3.51
3348 3586 8.798859 ACATTATTACTGTCAGCTCAAATCTT 57.201 30.769 0.00 0.00 0.00 2.40
3349 3587 9.890629 ACATTATTACTGTCAGCTCAAATCTTA 57.109 29.630 0.00 0.00 0.00 2.10
3400 3638 6.765036 ACCTATGAATCAACATGTTAGCTCTG 59.235 38.462 11.53 0.00 0.00 3.35
3403 3641 1.725641 TCAACATGTTAGCTCTGCCG 58.274 50.000 11.53 0.00 0.00 5.69
3426 3664 6.757010 CCGCTATCTCACTACAATAAAGTGTT 59.243 38.462 3.40 0.00 43.88 3.32
3429 3667 6.743575 ATCTCACTACAATAAAGTGTTGGC 57.256 37.500 3.40 0.00 43.88 4.52
3432 3670 3.192633 CACTACAATAAAGTGTTGGCCCC 59.807 47.826 0.00 0.00 39.61 5.80
3439 3677 1.152756 AGTGTTGGCCCCACTTGAC 60.153 57.895 17.12 2.00 40.14 3.18
3452 3690 2.433970 CCACTTGACCCCAACAACATTT 59.566 45.455 0.00 0.00 0.00 2.32
3461 3699 7.569240 TGACCCCAACAACATTTTTATTTTCT 58.431 30.769 0.00 0.00 0.00 2.52
3486 3724 9.341899 CTTGTAAAATTATTCGCTTGCTTACTT 57.658 29.630 0.00 0.00 0.00 2.24
3487 3725 9.685828 TTGTAAAATTATTCGCTTGCTTACTTT 57.314 25.926 0.00 0.00 0.00 2.66
3495 3733 3.625764 TCGCTTGCTTACTTTTGACAAGT 59.374 39.130 0.00 0.00 39.86 3.16
3502 3740 0.759060 ACTTTTGACAAGTGGGGCCC 60.759 55.000 18.17 18.17 0.00 5.80
3527 3765 8.366401 CCACACTTATCATTGTGAGATAGAGAT 58.634 37.037 3.30 0.00 45.03 2.75
3544 3782 3.131223 AGAGATAACTGACATGTGGGTCG 59.869 47.826 1.15 0.00 40.72 4.79
3555 3795 3.010361 ACATGTGGGTCGGGGTATTTTTA 59.990 43.478 0.00 0.00 0.00 1.52
3556 3796 3.070476 TGTGGGTCGGGGTATTTTTAC 57.930 47.619 0.00 0.00 0.00 2.01
3594 3834 3.739300 ACGAGTTTGACCTGACAATAACG 59.261 43.478 0.00 0.00 0.00 3.18
3620 3860 6.286758 TGTCTAATGGCATTTTTGAGCAAAA 58.713 32.000 19.21 4.39 38.76 2.44
3633 3873 6.822667 TTTGAGCAAAAATCTGATAGAGCA 57.177 33.333 0.00 0.00 0.00 4.26
3670 3910 7.840342 AGATATCTAATGGCATTTTCTAGCG 57.160 36.000 19.21 0.00 0.00 4.26
3681 3921 3.592898 TTTTCTAGCGAGCATCTCACA 57.407 42.857 0.00 0.00 0.00 3.58
3684 3924 2.369394 TCTAGCGAGCATCTCACAGAA 58.631 47.619 0.00 0.00 0.00 3.02
3705 3945 4.946784 ACGATGGCATTTTTGAGTAGTC 57.053 40.909 0.00 0.00 0.00 2.59
3735 3975 5.245531 TCTAATGGCAAAACTGAGTAGTGG 58.754 41.667 0.00 0.00 37.19 4.00
3740 3980 3.412386 GCAAAACTGAGTAGTGGGACAT 58.588 45.455 0.00 0.00 44.52 3.06
3757 3997 6.017109 GTGGGACATAACTAGTGGCATAAATG 60.017 42.308 0.00 0.00 44.52 2.32
3770 4010 7.684529 AGTGGCATAAATGATAAAAACCCAAA 58.315 30.769 0.00 0.00 0.00 3.28
3772 4012 8.955388 GTGGCATAAATGATAAAAACCCAAAAT 58.045 29.630 0.00 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.804783 GGAGAACAAAACAGAAACGAAAAAGA 59.195 34.615 0.00 0.00 0.00 2.52
1 2 6.806739 AGGAGAACAAAACAGAAACGAAAAAG 59.193 34.615 0.00 0.00 0.00 2.27
2 3 6.683715 AGGAGAACAAAACAGAAACGAAAAA 58.316 32.000 0.00 0.00 0.00 1.94
3 4 6.262193 AGGAGAACAAAACAGAAACGAAAA 57.738 33.333 0.00 0.00 0.00 2.29
4 5 5.890424 AGGAGAACAAAACAGAAACGAAA 57.110 34.783 0.00 0.00 0.00 3.46
5 6 5.890424 AAGGAGAACAAAACAGAAACGAA 57.110 34.783 0.00 0.00 0.00 3.85
6 7 5.890424 AAAGGAGAACAAAACAGAAACGA 57.110 34.783 0.00 0.00 0.00 3.85
7 8 8.628882 ATTTAAAGGAGAACAAAACAGAAACG 57.371 30.769 0.00 0.00 0.00 3.60
146 147 8.530269 TTGCTTCAAAAATTGCAAACATTTTT 57.470 23.077 13.60 13.60 41.58 1.94
147 148 8.705048 ATTGCTTCAAAAATTGCAAACATTTT 57.295 23.077 1.71 9.02 46.31 1.82
148 149 8.705048 AATTGCTTCAAAAATTGCAAACATTT 57.295 23.077 1.71 2.72 46.31 2.32
149 150 8.705048 AAATTGCTTCAAAAATTGCAAACATT 57.295 23.077 1.71 0.00 46.31 2.71
150 151 8.705048 AAAATTGCTTCAAAAATTGCAAACAT 57.295 23.077 1.71 0.00 46.31 2.71
151 152 8.530269 AAAAATTGCTTCAAAAATTGCAAACA 57.470 23.077 1.71 0.00 46.31 2.83
232 233 2.735126 GCGATAAAAGGGGCACAACATG 60.735 50.000 0.00 0.00 0.00 3.21
233 234 1.476488 GCGATAAAAGGGGCACAACAT 59.524 47.619 0.00 0.00 0.00 2.71
234 235 0.885196 GCGATAAAAGGGGCACAACA 59.115 50.000 0.00 0.00 0.00 3.33
235 236 0.172578 GGCGATAAAAGGGGCACAAC 59.827 55.000 0.00 0.00 0.00 3.32
236 237 0.968393 GGGCGATAAAAGGGGCACAA 60.968 55.000 0.00 0.00 0.00 3.33
237 238 1.379309 GGGCGATAAAAGGGGCACA 60.379 57.895 0.00 0.00 0.00 4.57
238 239 2.478033 CGGGCGATAAAAGGGGCAC 61.478 63.158 0.00 0.00 0.00 5.01
239 240 2.124487 CGGGCGATAAAAGGGGCA 60.124 61.111 0.00 0.00 0.00 5.36
240 241 1.444917 CTTCGGGCGATAAAAGGGGC 61.445 60.000 0.00 0.00 0.00 5.80
241 242 1.444917 GCTTCGGGCGATAAAAGGGG 61.445 60.000 0.00 0.00 0.00 4.79
242 243 0.746563 TGCTTCGGGCGATAAAAGGG 60.747 55.000 0.00 0.00 45.43 3.95
243 244 1.091537 TTGCTTCGGGCGATAAAAGG 58.908 50.000 0.00 0.00 45.43 3.11
244 245 1.529010 CGTTGCTTCGGGCGATAAAAG 60.529 52.381 0.00 0.00 45.43 2.27
245 246 0.444651 CGTTGCTTCGGGCGATAAAA 59.555 50.000 0.00 0.00 45.43 1.52
246 247 1.973137 GCGTTGCTTCGGGCGATAAA 61.973 55.000 0.00 0.00 45.43 1.40
247 248 2.457778 GCGTTGCTTCGGGCGATAA 61.458 57.895 0.00 0.00 45.43 1.75
248 249 2.888534 GCGTTGCTTCGGGCGATA 60.889 61.111 0.00 0.00 45.43 2.92
256 257 2.747507 AAATGCCCGTGCGTTGCTTC 62.748 55.000 0.00 0.00 45.88 3.86
257 258 2.855514 AAATGCCCGTGCGTTGCTT 61.856 52.632 0.00 0.00 45.88 3.91
258 259 3.294493 AAATGCCCGTGCGTTGCT 61.294 55.556 0.00 0.00 45.88 3.91
259 260 2.465097 TACAAATGCCCGTGCGTTGC 62.465 55.000 0.00 0.00 45.88 4.17
260 261 0.170116 ATACAAATGCCCGTGCGTTG 59.830 50.000 0.00 1.29 45.88 4.10
262 263 1.668751 CTAATACAAATGCCCGTGCGT 59.331 47.619 0.00 0.00 41.78 5.24
263 264 1.668751 ACTAATACAAATGCCCGTGCG 59.331 47.619 0.00 0.00 41.78 5.34
264 265 5.699458 AGTATACTAATACAAATGCCCGTGC 59.301 40.000 2.75 0.00 40.49 5.34
265 266 6.926826 TGAGTATACTAATACAAATGCCCGTG 59.073 38.462 5.09 0.00 40.49 4.94
266 267 7.058023 TGAGTATACTAATACAAATGCCCGT 57.942 36.000 5.09 0.00 40.49 5.28
267 268 9.084164 GTATGAGTATACTAATACAAATGCCCG 57.916 37.037 26.29 0.00 39.23 6.13
268 269 9.084164 CGTATGAGTATACTAATACAAATGCCC 57.916 37.037 28.65 9.46 39.33 5.36
269 270 8.592998 GCGTATGAGTATACTAATACAAATGCC 58.407 37.037 28.65 12.96 39.33 4.40
270 271 9.135843 TGCGTATGAGTATACTAATACAAATGC 57.864 33.333 28.65 24.38 39.33 3.56
286 287 9.451002 ACTACTATCATTACTATGCGTATGAGT 57.549 33.333 0.00 0.00 0.00 3.41
461 466 3.238441 GCTCGCGATTATAGAAGTCTGG 58.762 50.000 10.36 0.00 0.00 3.86
728 755 2.776536 AGAATCATCAACAGGAGGAGGG 59.223 50.000 0.00 0.00 40.08 4.30
800 828 0.028770 CAAAGCCAACGACGCAAAGA 59.971 50.000 0.00 0.00 0.00 2.52
911 940 7.823665 TCCATCAATCAGTTTTGATCAGAAAG 58.176 34.615 0.00 0.00 42.90 2.62
914 943 7.949690 AATCCATCAATCAGTTTTGATCAGA 57.050 32.000 0.00 0.00 42.90 3.27
925 954 7.046292 TGGAATTAGCAAATCCATCAATCAG 57.954 36.000 2.65 0.00 0.00 2.90
984 1013 4.814294 ATCGCGCGACAGGTTCCC 62.814 66.667 37.37 0.00 0.00 3.97
985 1014 3.554692 CATCGCGCGACAGGTTCC 61.555 66.667 37.37 0.00 0.00 3.62
992 1021 3.330853 CTAAGCCCATCGCGCGAC 61.331 66.667 37.37 22.59 44.76 5.19
1008 1037 1.558756 CAGAAGGGCAATCTCAGTCCT 59.441 52.381 0.00 0.00 44.57 3.85
1023 1052 3.675775 GCAGCAAGAGGAGTAGACAGAAG 60.676 52.174 0.00 0.00 0.00 2.85
1028 1057 1.202245 CGAGCAGCAAGAGGAGTAGAC 60.202 57.143 0.00 0.00 0.00 2.59
1029 1058 1.098869 CGAGCAGCAAGAGGAGTAGA 58.901 55.000 0.00 0.00 0.00 2.59
1080 1109 3.118408 GGGCTGTTGTGTGAGATATACCA 60.118 47.826 0.00 0.00 0.00 3.25
1117 1146 8.806429 TGAATGAACAACATAACTACCATCAT 57.194 30.769 0.00 0.00 38.38 2.45
1118 1147 8.806429 ATGAATGAACAACATAACTACCATCA 57.194 30.769 0.00 0.00 38.38 3.07
1119 1148 9.113838 AGATGAATGAACAACATAACTACCATC 57.886 33.333 0.00 0.00 38.38 3.51
1120 1149 9.113838 GAGATGAATGAACAACATAACTACCAT 57.886 33.333 0.00 0.00 38.38 3.55
1121 1150 8.321353 AGAGATGAATGAACAACATAACTACCA 58.679 33.333 0.00 0.00 38.38 3.25
1122 1151 8.723942 AGAGATGAATGAACAACATAACTACC 57.276 34.615 0.00 0.00 38.38 3.18
1155 1184 0.967380 CCAACCCCAAGCCACTGATC 60.967 60.000 0.00 0.00 0.00 2.92
1286 1418 5.885912 TGGATTGACTAGCCCTTTTCATAAC 59.114 40.000 0.00 0.00 0.00 1.89
1289 1421 4.263905 TGTGGATTGACTAGCCCTTTTCAT 60.264 41.667 0.00 0.00 0.00 2.57
1290 1422 3.073798 TGTGGATTGACTAGCCCTTTTCA 59.926 43.478 0.00 0.00 0.00 2.69
1291 1423 3.686016 TGTGGATTGACTAGCCCTTTTC 58.314 45.455 0.00 0.00 0.00 2.29
1292 1424 3.806949 TGTGGATTGACTAGCCCTTTT 57.193 42.857 0.00 0.00 0.00 2.27
1293 1425 5.653255 ATATGTGGATTGACTAGCCCTTT 57.347 39.130 0.00 0.00 0.00 3.11
1294 1426 5.606749 TGTATATGTGGATTGACTAGCCCTT 59.393 40.000 0.00 0.00 0.00 3.95
1295 1427 5.012148 GTGTATATGTGGATTGACTAGCCCT 59.988 44.000 0.00 0.00 0.00 5.19
1296 1428 5.012148 AGTGTATATGTGGATTGACTAGCCC 59.988 44.000 0.00 0.00 0.00 5.19
1297 1429 6.102897 AGTGTATATGTGGATTGACTAGCC 57.897 41.667 0.00 0.00 0.00 3.93
1298 1430 7.210174 TGAAGTGTATATGTGGATTGACTAGC 58.790 38.462 0.00 0.00 0.00 3.42
1299 1431 9.035607 GTTGAAGTGTATATGTGGATTGACTAG 57.964 37.037 0.00 0.00 0.00 2.57
1300 1432 8.536175 TGTTGAAGTGTATATGTGGATTGACTA 58.464 33.333 0.00 0.00 0.00 2.59
1301 1433 7.334421 GTGTTGAAGTGTATATGTGGATTGACT 59.666 37.037 0.00 0.00 0.00 3.41
1302 1434 7.414098 GGTGTTGAAGTGTATATGTGGATTGAC 60.414 40.741 0.00 0.00 0.00 3.18
1303 1435 6.597672 GGTGTTGAAGTGTATATGTGGATTGA 59.402 38.462 0.00 0.00 0.00 2.57
1304 1436 6.183360 GGGTGTTGAAGTGTATATGTGGATTG 60.183 42.308 0.00 0.00 0.00 2.67
1305 1437 5.885912 GGGTGTTGAAGTGTATATGTGGATT 59.114 40.000 0.00 0.00 0.00 3.01
1306 1438 5.191722 AGGGTGTTGAAGTGTATATGTGGAT 59.808 40.000 0.00 0.00 0.00 3.41
1307 1439 4.534500 AGGGTGTTGAAGTGTATATGTGGA 59.466 41.667 0.00 0.00 0.00 4.02
1308 1440 4.843728 AGGGTGTTGAAGTGTATATGTGG 58.156 43.478 0.00 0.00 0.00 4.17
1309 1441 5.734720 AGAGGGTGTTGAAGTGTATATGTG 58.265 41.667 0.00 0.00 0.00 3.21
1310 1442 5.483937 TGAGAGGGTGTTGAAGTGTATATGT 59.516 40.000 0.00 0.00 0.00 2.29
1311 1443 5.812642 GTGAGAGGGTGTTGAAGTGTATATG 59.187 44.000 0.00 0.00 0.00 1.78
1312 1444 5.394224 CGTGAGAGGGTGTTGAAGTGTATAT 60.394 44.000 0.00 0.00 0.00 0.86
1313 1445 4.082408 CGTGAGAGGGTGTTGAAGTGTATA 60.082 45.833 0.00 0.00 0.00 1.47
1314 1446 3.306088 CGTGAGAGGGTGTTGAAGTGTAT 60.306 47.826 0.00 0.00 0.00 2.29
1315 1447 2.035449 CGTGAGAGGGTGTTGAAGTGTA 59.965 50.000 0.00 0.00 0.00 2.90
1316 1448 1.202533 CGTGAGAGGGTGTTGAAGTGT 60.203 52.381 0.00 0.00 0.00 3.55
1317 1449 1.202533 ACGTGAGAGGGTGTTGAAGTG 60.203 52.381 0.00 0.00 0.00 3.16
1318 1450 1.120530 ACGTGAGAGGGTGTTGAAGT 58.879 50.000 0.00 0.00 0.00 3.01
1319 1451 1.202533 ACACGTGAGAGGGTGTTGAAG 60.203 52.381 25.01 0.00 44.49 3.02
1320 1452 0.828022 ACACGTGAGAGGGTGTTGAA 59.172 50.000 25.01 0.00 44.49 2.69
1321 1453 0.104120 CACACGTGAGAGGGTGTTGA 59.896 55.000 25.01 0.00 44.49 3.18
1322 1454 0.104120 TCACACGTGAGAGGGTGTTG 59.896 55.000 25.01 6.61 44.49 3.33
1323 1455 0.104304 GTCACACGTGAGAGGGTGTT 59.896 55.000 25.01 0.00 44.49 3.32
1325 1457 1.371758 CGTCACACGTGAGAGGGTG 60.372 63.158 25.01 9.04 40.75 4.61
1326 1458 3.039988 CGTCACACGTGAGAGGGT 58.960 61.111 25.01 0.00 40.75 4.34
1327 1459 2.430921 GCGTCACACGTGAGAGGG 60.431 66.667 28.34 19.00 44.73 4.30
1334 1466 1.947642 GACTTTCCGCGTCACACGT 60.948 57.895 4.92 0.00 44.73 4.49
1335 1467 1.484227 TTGACTTTCCGCGTCACACG 61.484 55.000 4.92 0.00 45.88 4.49
1336 1468 0.042448 GTTGACTTTCCGCGTCACAC 60.042 55.000 4.92 0.00 40.78 3.82
1337 1469 0.460459 TGTTGACTTTCCGCGTCACA 60.460 50.000 4.92 0.50 40.78 3.58
1338 1470 0.042448 GTGTTGACTTTCCGCGTCAC 60.042 55.000 4.92 0.00 40.78 3.67
1339 1471 1.484227 CGTGTTGACTTTCCGCGTCA 61.484 55.000 4.92 0.00 39.45 4.35
1340 1472 1.200839 CGTGTTGACTTTCCGCGTC 59.799 57.895 4.92 0.00 0.00 5.19
1341 1473 1.519898 ACGTGTTGACTTTCCGCGT 60.520 52.632 4.92 0.00 40.14 6.01
1342 1474 1.083657 CACGTGTTGACTTTCCGCG 60.084 57.895 7.58 0.00 38.03 6.46
1343 1475 1.155424 TCCACGTGTTGACTTTCCGC 61.155 55.000 15.65 0.00 0.00 5.54
1344 1476 1.508632 ATCCACGTGTTGACTTTCCG 58.491 50.000 15.65 0.00 0.00 4.30
1345 1477 3.678548 GTCTATCCACGTGTTGACTTTCC 59.321 47.826 15.65 0.00 0.00 3.13
1346 1478 4.557205 AGTCTATCCACGTGTTGACTTTC 58.443 43.478 15.65 0.00 31.71 2.62
1347 1479 4.038763 TGAGTCTATCCACGTGTTGACTTT 59.961 41.667 18.97 4.28 35.29 2.66
1348 1480 3.572682 TGAGTCTATCCACGTGTTGACTT 59.427 43.478 18.97 7.93 35.29 3.01
1349 1481 3.154710 TGAGTCTATCCACGTGTTGACT 58.845 45.455 18.34 18.34 37.46 3.41
1350 1482 3.190744 TCTGAGTCTATCCACGTGTTGAC 59.809 47.826 15.65 12.94 0.00 3.18
1351 1483 3.418047 TCTGAGTCTATCCACGTGTTGA 58.582 45.455 15.65 5.84 0.00 3.18
1352 1484 3.428180 CCTCTGAGTCTATCCACGTGTTG 60.428 52.174 15.65 0.00 0.00 3.33
1353 1485 2.755655 CCTCTGAGTCTATCCACGTGTT 59.244 50.000 15.65 4.05 0.00 3.32
1354 1486 2.291024 ACCTCTGAGTCTATCCACGTGT 60.291 50.000 15.65 0.00 0.00 4.49
1355 1487 2.370349 ACCTCTGAGTCTATCCACGTG 58.630 52.381 9.08 9.08 0.00 4.49
1356 1488 2.810870 ACCTCTGAGTCTATCCACGT 57.189 50.000 3.66 0.00 0.00 4.49
1357 1489 3.504134 CCATACCTCTGAGTCTATCCACG 59.496 52.174 3.66 0.00 0.00 4.94
1358 1490 3.257127 GCCATACCTCTGAGTCTATCCAC 59.743 52.174 3.66 0.00 0.00 4.02
1359 1491 3.141083 AGCCATACCTCTGAGTCTATCCA 59.859 47.826 3.66 0.00 0.00 3.41
1360 1492 3.761752 GAGCCATACCTCTGAGTCTATCC 59.238 52.174 3.66 0.00 0.00 2.59
1361 1493 4.402829 TGAGCCATACCTCTGAGTCTATC 58.597 47.826 3.66 0.00 33.02 2.08
1362 1494 4.461450 TGAGCCATACCTCTGAGTCTAT 57.539 45.455 3.66 0.00 33.02 1.98
1363 1495 3.953542 TGAGCCATACCTCTGAGTCTA 57.046 47.619 3.66 0.00 33.02 2.59
1364 1496 2.836636 TGAGCCATACCTCTGAGTCT 57.163 50.000 3.66 0.00 33.02 3.24
1365 1497 3.027412 TCTTGAGCCATACCTCTGAGTC 58.973 50.000 3.66 0.00 33.02 3.36
1366 1498 3.030291 CTCTTGAGCCATACCTCTGAGT 58.970 50.000 3.66 0.00 33.16 3.41
1367 1499 2.364970 CCTCTTGAGCCATACCTCTGAG 59.635 54.545 0.00 0.00 35.26 3.35
1368 1500 2.392662 CCTCTTGAGCCATACCTCTGA 58.607 52.381 0.00 0.00 33.02 3.27
1369 1501 1.415659 CCCTCTTGAGCCATACCTCTG 59.584 57.143 0.00 0.00 33.02 3.35
1370 1502 1.799933 CCCTCTTGAGCCATACCTCT 58.200 55.000 0.00 0.00 33.02 3.69
1371 1503 0.107643 GCCCTCTTGAGCCATACCTC 59.892 60.000 0.00 0.00 0.00 3.85
1372 1504 0.327000 AGCCCTCTTGAGCCATACCT 60.327 55.000 0.00 0.00 0.00 3.08
1373 1505 1.424638 TAGCCCTCTTGAGCCATACC 58.575 55.000 0.00 0.00 0.00 2.73
1374 1506 4.223923 ACATATAGCCCTCTTGAGCCATAC 59.776 45.833 0.00 0.00 0.00 2.39
1375 1507 4.429505 ACATATAGCCCTCTTGAGCCATA 58.570 43.478 0.00 0.00 0.00 2.74
1376 1508 3.254960 ACATATAGCCCTCTTGAGCCAT 58.745 45.455 0.00 0.00 0.00 4.40
1377 1509 2.694397 ACATATAGCCCTCTTGAGCCA 58.306 47.619 0.00 0.00 0.00 4.75
1378 1510 3.071602 TCAACATATAGCCCTCTTGAGCC 59.928 47.826 0.00 0.00 0.00 4.70
1379 1511 4.061596 GTCAACATATAGCCCTCTTGAGC 58.938 47.826 0.00 0.00 0.00 4.26
1380 1512 5.282055 TGTCAACATATAGCCCTCTTGAG 57.718 43.478 0.00 0.00 0.00 3.02
1381 1513 5.894298 ATGTCAACATATAGCCCTCTTGA 57.106 39.130 0.00 0.00 34.26 3.02
1382 1514 6.997655 TCTATGTCAACATATAGCCCTCTTG 58.002 40.000 3.44 0.00 38.09 3.02
1383 1515 7.256475 CCTTCTATGTCAACATATAGCCCTCTT 60.256 40.741 3.44 0.00 38.09 2.85
1384 1516 6.212388 CCTTCTATGTCAACATATAGCCCTCT 59.788 42.308 3.44 0.00 38.09 3.69
1385 1517 6.402222 CCTTCTATGTCAACATATAGCCCTC 58.598 44.000 3.44 0.00 38.09 4.30
1386 1518 5.249393 CCCTTCTATGTCAACATATAGCCCT 59.751 44.000 3.44 0.00 38.09 5.19
1387 1519 5.491982 CCCTTCTATGTCAACATATAGCCC 58.508 45.833 3.44 0.00 38.09 5.19
1388 1520 5.491982 CCCCTTCTATGTCAACATATAGCC 58.508 45.833 3.44 0.00 38.09 3.93
1389 1521 4.938226 GCCCCTTCTATGTCAACATATAGC 59.062 45.833 3.44 0.00 38.09 2.97
1390 1522 6.114187 TGCCCCTTCTATGTCAACATATAG 57.886 41.667 3.44 4.90 38.09 1.31
1391 1523 6.126623 TGTTGCCCCTTCTATGTCAACATATA 60.127 38.462 3.44 0.00 38.86 0.86
1392 1524 5.133221 GTTGCCCCTTCTATGTCAACATAT 58.867 41.667 3.44 0.00 38.09 1.78
1393 1525 4.018870 TGTTGCCCCTTCTATGTCAACATA 60.019 41.667 3.03 3.03 38.86 2.29
1394 1526 3.245229 TGTTGCCCCTTCTATGTCAACAT 60.245 43.478 0.70 0.70 38.86 2.71
1395 1527 2.107378 TGTTGCCCCTTCTATGTCAACA 59.893 45.455 0.00 0.00 40.67 3.33
1396 1528 2.749621 CTGTTGCCCCTTCTATGTCAAC 59.250 50.000 0.00 0.00 35.64 3.18
1397 1529 2.879756 GCTGTTGCCCCTTCTATGTCAA 60.880 50.000 0.00 0.00 0.00 3.18
1398 1530 1.340017 GCTGTTGCCCCTTCTATGTCA 60.340 52.381 0.00 0.00 0.00 3.58
1399 1531 1.340017 TGCTGTTGCCCCTTCTATGTC 60.340 52.381 0.00 0.00 38.71 3.06
1400 1532 0.698238 TGCTGTTGCCCCTTCTATGT 59.302 50.000 0.00 0.00 38.71 2.29
1401 1533 1.838112 TTGCTGTTGCCCCTTCTATG 58.162 50.000 0.00 0.00 38.71 2.23
1402 1534 2.834638 ATTGCTGTTGCCCCTTCTAT 57.165 45.000 0.00 0.00 38.71 1.98
1403 1535 2.603075 AATTGCTGTTGCCCCTTCTA 57.397 45.000 0.00 0.00 38.71 2.10
1404 1536 1.720781 AAATTGCTGTTGCCCCTTCT 58.279 45.000 0.00 0.00 38.71 2.85
1405 1537 2.549064 AAAATTGCTGTTGCCCCTTC 57.451 45.000 0.00 0.00 38.71 3.46
1422 1554 4.202161 TGGCTTTCGCAGTTTATCCAAAAA 60.202 37.500 0.00 0.00 38.10 1.94
1423 1555 3.319405 TGGCTTTCGCAGTTTATCCAAAA 59.681 39.130 0.00 0.00 38.10 2.44
1424 1556 2.887783 TGGCTTTCGCAGTTTATCCAAA 59.112 40.909 0.00 0.00 38.10 3.28
1425 1557 2.487762 CTGGCTTTCGCAGTTTATCCAA 59.512 45.455 0.00 0.00 38.10 3.53
1426 1558 2.083774 CTGGCTTTCGCAGTTTATCCA 58.916 47.619 0.00 0.00 38.10 3.41
1427 1559 1.401905 CCTGGCTTTCGCAGTTTATCC 59.598 52.381 0.00 0.00 38.10 2.59
1428 1560 2.096013 GTCCTGGCTTTCGCAGTTTATC 59.904 50.000 0.00 0.00 38.10 1.75
1429 1561 2.084546 GTCCTGGCTTTCGCAGTTTAT 58.915 47.619 0.00 0.00 38.10 1.40
1430 1562 1.071699 AGTCCTGGCTTTCGCAGTTTA 59.928 47.619 0.00 0.00 38.10 2.01
1431 1563 0.179018 AGTCCTGGCTTTCGCAGTTT 60.179 50.000 0.00 0.00 38.10 2.66
1432 1564 0.179018 AAGTCCTGGCTTTCGCAGTT 60.179 50.000 0.00 0.00 38.10 3.16
1433 1565 0.886490 CAAGTCCTGGCTTTCGCAGT 60.886 55.000 1.37 0.00 38.10 4.40
1434 1566 0.603707 TCAAGTCCTGGCTTTCGCAG 60.604 55.000 1.37 0.00 38.10 5.18
1435 1567 0.179032 TTCAAGTCCTGGCTTTCGCA 60.179 50.000 1.37 0.00 38.10 5.10
1436 1568 0.238553 GTTCAAGTCCTGGCTTTCGC 59.761 55.000 1.37 0.00 0.00 4.70
1437 1569 1.801178 GAGTTCAAGTCCTGGCTTTCG 59.199 52.381 1.37 0.00 0.00 3.46
1438 1570 2.851195 TGAGTTCAAGTCCTGGCTTTC 58.149 47.619 1.37 0.00 0.00 2.62
1439 1571 3.217626 CTTGAGTTCAAGTCCTGGCTTT 58.782 45.455 12.61 0.00 46.11 3.51
1440 1572 2.856222 CTTGAGTTCAAGTCCTGGCTT 58.144 47.619 12.61 0.00 46.11 4.35
1441 1573 2.557920 CTTGAGTTCAAGTCCTGGCT 57.442 50.000 12.61 0.00 46.11 4.75
1450 1582 2.039879 GGGCCTAAGGTCTTGAGTTCAA 59.960 50.000 0.84 0.00 0.00 2.69
1451 1583 1.628846 GGGCCTAAGGTCTTGAGTTCA 59.371 52.381 0.84 0.00 0.00 3.18
1452 1584 1.909986 AGGGCCTAAGGTCTTGAGTTC 59.090 52.381 2.82 0.00 0.00 3.01
1453 1585 1.630878 CAGGGCCTAAGGTCTTGAGTT 59.369 52.381 5.28 0.00 36.46 3.01
1454 1586 1.203313 TCAGGGCCTAAGGTCTTGAGT 60.203 52.381 5.28 0.00 38.47 3.41
1455 1587 1.573108 TCAGGGCCTAAGGTCTTGAG 58.427 55.000 5.28 0.00 38.47 3.02
1456 1588 2.270434 ATCAGGGCCTAAGGTCTTGA 57.730 50.000 5.28 0.00 46.83 3.02
1457 1589 2.104963 GGTATCAGGGCCTAAGGTCTTG 59.895 54.545 5.28 0.00 35.65 3.02
1458 1590 2.293586 TGGTATCAGGGCCTAAGGTCTT 60.294 50.000 5.28 0.00 0.00 3.01
1459 1591 1.294068 TGGTATCAGGGCCTAAGGTCT 59.706 52.381 5.28 0.00 0.00 3.85
1460 1592 1.802553 TGGTATCAGGGCCTAAGGTC 58.197 55.000 5.28 0.00 0.00 3.85
1461 1593 2.127708 CTTGGTATCAGGGCCTAAGGT 58.872 52.381 5.28 0.00 0.00 3.50
1462 1594 2.127708 ACTTGGTATCAGGGCCTAAGG 58.872 52.381 5.28 0.00 0.00 2.69
1463 1595 3.933861 AACTTGGTATCAGGGCCTAAG 57.066 47.619 5.28 7.94 0.00 2.18
1464 1596 4.384868 GCTTAACTTGGTATCAGGGCCTAA 60.385 45.833 5.28 0.00 0.00 2.69
1465 1597 3.135895 GCTTAACTTGGTATCAGGGCCTA 59.864 47.826 5.28 0.00 0.00 3.93
1466 1598 2.092375 GCTTAACTTGGTATCAGGGCCT 60.092 50.000 0.00 0.00 0.00 5.19
1467 1599 2.092375 AGCTTAACTTGGTATCAGGGCC 60.092 50.000 0.00 0.00 0.00 5.80
1468 1600 3.283259 AGCTTAACTTGGTATCAGGGC 57.717 47.619 0.00 0.00 0.00 5.19
1469 1601 4.843728 TGAAGCTTAACTTGGTATCAGGG 58.156 43.478 0.00 0.00 39.29 4.45
1470 1602 5.220931 GCATGAAGCTTAACTTGGTATCAGG 60.221 44.000 0.00 0.00 39.29 3.86
1471 1603 5.355071 TGCATGAAGCTTAACTTGGTATCAG 59.645 40.000 0.00 0.00 45.94 2.90
1472 1604 5.123820 GTGCATGAAGCTTAACTTGGTATCA 59.876 40.000 0.00 0.00 45.94 2.15
1473 1605 5.355350 AGTGCATGAAGCTTAACTTGGTATC 59.645 40.000 0.00 0.00 45.94 2.24
1474 1606 5.256474 AGTGCATGAAGCTTAACTTGGTAT 58.744 37.500 0.00 0.00 45.94 2.73
1475 1607 4.651778 AGTGCATGAAGCTTAACTTGGTA 58.348 39.130 0.00 0.00 45.94 3.25
1476 1608 3.490348 AGTGCATGAAGCTTAACTTGGT 58.510 40.909 0.00 0.00 45.94 3.67
1477 1609 4.437930 GCTAGTGCATGAAGCTTAACTTGG 60.438 45.833 0.00 0.00 45.94 3.61
1478 1610 4.437930 GGCTAGTGCATGAAGCTTAACTTG 60.438 45.833 14.92 0.00 45.94 3.16
1479 1611 3.691609 GGCTAGTGCATGAAGCTTAACTT 59.308 43.478 14.92 0.00 45.94 2.66
1480 1612 3.274288 GGCTAGTGCATGAAGCTTAACT 58.726 45.455 14.92 1.31 45.94 2.24
1481 1613 3.009723 TGGCTAGTGCATGAAGCTTAAC 58.990 45.455 14.92 0.00 45.94 2.01
1482 1614 3.348647 TGGCTAGTGCATGAAGCTTAA 57.651 42.857 14.92 0.00 45.94 1.85
1483 1615 3.009723 GTTGGCTAGTGCATGAAGCTTA 58.990 45.455 14.92 5.14 45.94 3.09
1484 1616 1.815003 GTTGGCTAGTGCATGAAGCTT 59.185 47.619 14.92 0.00 45.94 3.74
1485 1617 1.457346 GTTGGCTAGTGCATGAAGCT 58.543 50.000 14.92 0.00 45.94 3.74
1486 1618 0.097674 CGTTGGCTAGTGCATGAAGC 59.902 55.000 0.00 8.84 45.96 3.86
1487 1619 0.097674 GCGTTGGCTAGTGCATGAAG 59.902 55.000 0.00 0.00 41.91 3.02
1488 1620 0.605050 TGCGTTGGCTAGTGCATGAA 60.605 50.000 0.00 0.00 41.91 2.57
1489 1621 0.605050 TTGCGTTGGCTAGTGCATGA 60.605 50.000 0.00 0.00 41.91 3.07
1490 1622 0.454957 GTTGCGTTGGCTAGTGCATG 60.455 55.000 0.00 0.00 41.91 4.06
1491 1623 1.586154 GGTTGCGTTGGCTAGTGCAT 61.586 55.000 0.00 0.00 41.91 3.96
1492 1624 2.258013 GGTTGCGTTGGCTAGTGCA 61.258 57.895 0.00 0.00 41.91 4.57
1493 1625 1.791103 TTGGTTGCGTTGGCTAGTGC 61.791 55.000 0.00 0.00 40.82 4.40
1494 1626 0.665835 TTTGGTTGCGTTGGCTAGTG 59.334 50.000 0.00 0.00 40.82 2.74
1495 1627 1.336755 CTTTTGGTTGCGTTGGCTAGT 59.663 47.619 0.00 0.00 40.82 2.57
1496 1628 1.336755 ACTTTTGGTTGCGTTGGCTAG 59.663 47.619 0.00 0.00 40.82 3.42
1497 1629 1.335496 GACTTTTGGTTGCGTTGGCTA 59.665 47.619 0.00 0.00 40.82 3.93
1498 1630 0.102300 GACTTTTGGTTGCGTTGGCT 59.898 50.000 0.00 0.00 40.82 4.75
1499 1631 0.874175 GGACTTTTGGTTGCGTTGGC 60.874 55.000 0.00 0.00 40.52 4.52
1500 1632 0.593773 CGGACTTTTGGTTGCGTTGG 60.594 55.000 0.00 0.00 0.00 3.77
1501 1633 0.378962 TCGGACTTTTGGTTGCGTTG 59.621 50.000 0.00 0.00 0.00 4.10
1502 1634 1.096416 TTCGGACTTTTGGTTGCGTT 58.904 45.000 0.00 0.00 0.00 4.84
1503 1635 0.379316 GTTCGGACTTTTGGTTGCGT 59.621 50.000 0.00 0.00 0.00 5.24
1504 1636 0.661020 AGTTCGGACTTTTGGTTGCG 59.339 50.000 0.00 0.00 29.87 4.85
1505 1637 1.673920 TCAGTTCGGACTTTTGGTTGC 59.326 47.619 0.00 0.00 32.54 4.17
1506 1638 3.304659 CCATCAGTTCGGACTTTTGGTTG 60.305 47.826 12.08 0.00 33.55 3.77
1507 1639 2.884639 CCATCAGTTCGGACTTTTGGTT 59.115 45.455 12.08 0.00 33.55 3.67
1508 1640 2.105821 TCCATCAGTTCGGACTTTTGGT 59.894 45.455 17.54 0.00 36.97 3.67
1509 1641 2.778299 TCCATCAGTTCGGACTTTTGG 58.222 47.619 13.60 13.60 36.98 3.28
1510 1642 4.320494 CCTTTCCATCAGTTCGGACTTTTG 60.320 45.833 0.00 0.00 32.54 2.44
1511 1643 3.821033 CCTTTCCATCAGTTCGGACTTTT 59.179 43.478 0.00 0.00 32.54 2.27
1512 1644 3.412386 CCTTTCCATCAGTTCGGACTTT 58.588 45.455 0.00 0.00 32.54 2.66
1513 1645 2.290323 CCCTTTCCATCAGTTCGGACTT 60.290 50.000 0.00 0.00 32.54 3.01
1514 1646 1.279271 CCCTTTCCATCAGTTCGGACT 59.721 52.381 0.00 0.00 36.25 3.85
1515 1647 1.739067 CCCTTTCCATCAGTTCGGAC 58.261 55.000 0.00 0.00 0.00 4.79
1516 1648 0.035439 GCCCTTTCCATCAGTTCGGA 60.035 55.000 0.00 0.00 0.00 4.55
1517 1649 0.035056 AGCCCTTTCCATCAGTTCGG 60.035 55.000 0.00 0.00 0.00 4.30
1518 1650 2.555199 CTAGCCCTTTCCATCAGTTCG 58.445 52.381 0.00 0.00 0.00 3.95
1519 1651 2.924421 CCTAGCCCTTTCCATCAGTTC 58.076 52.381 0.00 0.00 0.00 3.01
1520 1652 1.064389 GCCTAGCCCTTTCCATCAGTT 60.064 52.381 0.00 0.00 0.00 3.16
1521 1653 0.548510 GCCTAGCCCTTTCCATCAGT 59.451 55.000 0.00 0.00 0.00 3.41
1522 1654 0.548031 TGCCTAGCCCTTTCCATCAG 59.452 55.000 0.00 0.00 0.00 2.90
1523 1655 0.998928 TTGCCTAGCCCTTTCCATCA 59.001 50.000 0.00 0.00 0.00 3.07
1524 1656 2.234143 GATTGCCTAGCCCTTTCCATC 58.766 52.381 0.00 0.00 0.00 3.51
1525 1657 1.133356 GGATTGCCTAGCCCTTTCCAT 60.133 52.381 0.00 0.00 0.00 3.41
1526 1658 0.258774 GGATTGCCTAGCCCTTTCCA 59.741 55.000 0.00 0.00 0.00 3.53
1527 1659 0.258774 TGGATTGCCTAGCCCTTTCC 59.741 55.000 0.00 0.00 34.31 3.13
1528 1660 1.340991 TGTGGATTGCCTAGCCCTTTC 60.341 52.381 0.00 0.00 34.31 2.62
1529 1661 0.704076 TGTGGATTGCCTAGCCCTTT 59.296 50.000 0.00 0.00 34.31 3.11
1530 1662 0.929244 ATGTGGATTGCCTAGCCCTT 59.071 50.000 0.00 0.00 34.31 3.95
1531 1663 1.819753 TATGTGGATTGCCTAGCCCT 58.180 50.000 0.00 0.00 34.31 5.19
1532 1664 2.887151 ATATGTGGATTGCCTAGCCC 57.113 50.000 0.00 0.00 34.31 5.19
1533 1665 7.775093 TGATTTATATATGTGGATTGCCTAGCC 59.225 37.037 0.00 0.00 34.31 3.93
1534 1666 8.737168 TGATTTATATATGTGGATTGCCTAGC 57.263 34.615 0.00 0.00 34.31 3.42
1536 1668 9.123902 GCATGATTTATATATGTGGATTGCCTA 57.876 33.333 0.00 0.00 34.31 3.93
1537 1669 7.616542 TGCATGATTTATATATGTGGATTGCCT 59.383 33.333 0.00 0.00 34.31 4.75
1538 1670 7.774134 TGCATGATTTATATATGTGGATTGCC 58.226 34.615 0.00 0.00 0.00 4.52
1539 1671 9.244799 CATGCATGATTTATATATGTGGATTGC 57.755 33.333 22.59 0.00 0.00 3.56
1540 1672 9.744468 CCATGCATGATTTATATATGTGGATTG 57.256 33.333 28.31 0.04 0.00 2.67
1541 1673 9.483489 ACCATGCATGATTTATATATGTGGATT 57.517 29.630 28.31 0.00 0.00 3.01
1542 1674 9.483489 AACCATGCATGATTTATATATGTGGAT 57.517 29.630 28.31 0.00 0.00 3.41
1543 1675 8.741841 CAACCATGCATGATTTATATATGTGGA 58.258 33.333 28.31 0.00 0.00 4.02
1544 1676 8.525316 ACAACCATGCATGATTTATATATGTGG 58.475 33.333 28.31 12.43 0.00 4.17
1552 1684 8.938801 TCCTTATACAACCATGCATGATTTAT 57.061 30.769 28.31 18.62 0.00 1.40
1590 1722 4.574828 ACGATGTTAACAATGGCATAGACC 59.425 41.667 13.23 0.00 0.00 3.85
1592 1724 5.423886 TGACGATGTTAACAATGGCATAGA 58.576 37.500 13.23 0.00 0.00 1.98
1598 1730 6.241207 AGAAGTTGACGATGTTAACAATGG 57.759 37.500 13.23 7.32 35.03 3.16
1670 1885 7.110155 TCCATAAACCTGAATCTTCTAACACC 58.890 38.462 0.00 0.00 0.00 4.16
1806 2021 7.061094 GGAATTTTGCTCAAAGTTAGTTGATCG 59.939 37.037 3.60 0.00 36.92 3.69
1999 2214 3.998341 TGTACCGAATTACAGACCAAAGC 59.002 43.478 0.00 0.00 0.00 3.51
2025 2240 8.861101 CAATCTTTCTACAGTACCTAAAACTCG 58.139 37.037 0.00 0.00 0.00 4.18
2500 2726 4.605183 AGATGAGCCGGATATAGCTTACT 58.395 43.478 5.05 0.00 40.11 2.24
2778 3009 3.251004 GGCCTTTCTACCTTTATGCATCG 59.749 47.826 0.19 0.00 0.00 3.84
2786 3017 1.497286 TGGTGTGGCCTTTCTACCTTT 59.503 47.619 3.32 0.00 38.35 3.11
2949 3181 6.528072 GGCTTCAAGTTGACATAATAAACTGC 59.472 38.462 4.68 0.00 34.46 4.40
3132 3369 0.395862 TTCAACGGCAAAGGGGACAA 60.396 50.000 0.00 0.00 0.00 3.18
3163 3400 1.929494 TCTTTGGTAGGGGCAATCCAT 59.071 47.619 0.00 0.00 37.22 3.41
3236 3474 7.555965 AGTGGCATAAATGATAAAAACCCTTC 58.444 34.615 0.00 0.00 0.00 3.46
3261 3499 7.677747 GCAAAACTAAGTAGTGCAACACAACTA 60.678 37.037 0.00 0.00 41.43 2.24
3262 3500 6.551736 CAAAACTAAGTAGTGCAACACAACT 58.448 36.000 0.00 0.00 41.43 3.16
3270 3508 3.815809 AGTGGCAAAACTAAGTAGTGCA 58.184 40.909 6.79 0.00 36.50 4.57
3271 3509 4.392138 CCTAGTGGCAAAACTAAGTAGTGC 59.608 45.833 0.00 0.00 36.50 4.40
3277 3515 7.214467 TGAAATTCCTAGTGGCAAAACTAAG 57.786 36.000 0.00 0.00 32.35 2.18
3279 3517 7.775053 ATTGAAATTCCTAGTGGCAAAACTA 57.225 32.000 0.00 0.00 0.00 2.24
3303 3541 2.037901 TCCAGTGGCATTTTTGAGCAA 58.962 42.857 3.51 0.00 0.00 3.91
3304 3542 1.340889 GTCCAGTGGCATTTTTGAGCA 59.659 47.619 3.51 0.00 0.00 4.26
3332 3570 5.106038 TGGCAAATAAGATTTGAGCTGACAG 60.106 40.000 14.56 0.00 0.00 3.51
3336 3574 5.657474 ACATGGCAAATAAGATTTGAGCTG 58.343 37.500 14.56 9.90 0.00 4.24
3338 3576 9.748708 TTATAACATGGCAAATAAGATTTGAGC 57.251 29.630 14.56 1.80 0.00 4.26
3382 3620 2.679837 CGGCAGAGCTAACATGTTGATT 59.320 45.455 21.42 5.83 0.00 2.57
3384 3622 1.725641 CGGCAGAGCTAACATGTTGA 58.274 50.000 21.42 4.65 0.00 3.18
3400 3638 5.175856 CACTTTATTGTAGTGAGATAGCGGC 59.824 44.000 0.00 0.00 44.52 6.53
3403 3641 7.466050 GCCAACACTTTATTGTAGTGAGATAGC 60.466 40.741 9.74 2.48 44.52 2.97
3429 3667 1.112916 GTTGTTGGGGTCAAGTGGGG 61.113 60.000 0.00 0.00 32.92 4.96
3432 3670 3.817709 AAATGTTGTTGGGGTCAAGTG 57.182 42.857 0.00 0.00 32.92 3.16
3439 3677 8.219546 ACAAGAAAATAAAAATGTTGTTGGGG 57.780 30.769 3.96 0.00 30.73 4.96
3461 3699 9.685828 AAAGTAAGCAAGCGAATAATTTTACAA 57.314 25.926 0.00 0.00 0.00 2.41
3480 3718 2.296190 GGCCCCACTTGTCAAAAGTAAG 59.704 50.000 0.00 0.00 0.00 2.34
3486 3724 3.019783 TGGGCCCCACTTGTCAAA 58.980 55.556 22.27 0.00 0.00 2.69
3495 3733 1.006813 AATGATAAGTGTGGGCCCCA 58.993 50.000 22.27 14.62 0.00 4.96
3527 3765 0.611200 CCCGACCCACATGTCAGTTA 59.389 55.000 0.00 0.00 34.88 2.24
3530 3768 1.261938 TACCCCGACCCACATGTCAG 61.262 60.000 0.00 0.00 34.88 3.51
3531 3769 0.619255 ATACCCCGACCCACATGTCA 60.619 55.000 0.00 0.00 34.88 3.58
3556 3796 6.315144 TCAAACTCGTTGACCATGTTATATGG 59.685 38.462 6.44 6.44 41.47 2.74
3575 3815 5.305585 ACATCGTTATTGTCAGGTCAAACT 58.694 37.500 0.00 0.00 0.00 2.66
3583 3823 5.523552 TGCCATTAGACATCGTTATTGTCAG 59.476 40.000 6.59 0.00 44.73 3.51
3587 3827 8.533965 CAAAAATGCCATTAGACATCGTTATTG 58.466 33.333 0.00 0.00 0.00 1.90
3594 3834 5.653507 TGCTCAAAAATGCCATTAGACATC 58.346 37.500 0.00 0.00 0.00 3.06
3620 3860 6.726490 AAAATGCCATTGCTCTATCAGATT 57.274 33.333 0.00 0.00 38.71 2.40
3645 3885 8.749354 TCGCTAGAAAATGCCATTAGATATCTA 58.251 33.333 8.44 8.44 0.00 1.98
3665 3905 2.458951 GTTCTGTGAGATGCTCGCTAG 58.541 52.381 9.13 5.65 41.09 3.42
3666 3906 1.202188 CGTTCTGTGAGATGCTCGCTA 60.202 52.381 9.13 0.00 41.09 4.26
3670 3910 2.200067 CCATCGTTCTGTGAGATGCTC 58.800 52.381 0.00 0.00 40.11 4.26
3681 3921 5.003804 ACTACTCAAAAATGCCATCGTTCT 58.996 37.500 0.00 0.00 0.00 3.01
3684 3924 3.370978 CGACTACTCAAAAATGCCATCGT 59.629 43.478 0.00 0.00 0.00 3.73
3705 3945 6.073222 ACTCAGTTTTGCCATTAGAAGTTACG 60.073 38.462 0.00 0.00 0.00 3.18
3735 3975 7.986085 ATCATTTATGCCACTAGTTATGTCC 57.014 36.000 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.