Multiple sequence alignment - TraesCS4D01G113700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G113700 chr4D 100.000 6391 0 0 1 6391 94373229 94379619 0.000000e+00 11803.0
1 TraesCS4D01G113700 chr4D 100.000 45 0 0 5726 5770 94378912 94378956 4.110000e-12 84.2
2 TraesCS4D01G113700 chr4D 100.000 45 0 0 5684 5728 94378954 94378998 4.110000e-12 84.2
3 TraesCS4D01G113700 chr4B 89.939 5735 324 108 1 5609 133588364 133593971 0.000000e+00 7160.0
4 TraesCS4D01G113700 chr4A 90.711 3251 181 43 2483 5658 486378923 486375719 0.000000e+00 4218.0
5 TraesCS4D01G113700 chr4A 88.986 345 17 8 6062 6390 486375423 486375084 2.150000e-109 407.0
6 TraesCS4D01G113700 chr4A 85.141 249 16 7 2971 3199 614410403 614410650 1.070000e-57 235.0
7 TraesCS4D01G113700 chr4A 94.167 120 7 0 5736 5855 486375723 486375604 3.940000e-42 183.0
8 TraesCS4D01G113700 chr4A 89.333 150 7 3 5895 6044 486375619 486375479 5.090000e-41 180.0
9 TraesCS4D01G113700 chr4A 100.000 34 0 0 1439 1472 574784897 574784930 5.350000e-06 63.9
10 TraesCS4D01G113700 chr4A 97.143 35 1 0 5694 5728 486375723 486375689 6.920000e-05 60.2
11 TraesCS4D01G113700 chr5D 76.203 748 145 28 2057 2794 423505478 423504754 1.310000e-96 364.0
12 TraesCS4D01G113700 chr5D 80.000 305 51 9 1423 1720 423505816 423505515 3.880000e-52 217.0
13 TraesCS4D01G113700 chr5A 75.467 750 148 28 2057 2794 536987504 536986779 3.690000e-87 333.0
14 TraesCS4D01G113700 chr5A 79.801 302 46 12 1423 1720 536987831 536987541 8.400000e-49 206.0
15 TraesCS4D01G113700 chr5B 75.563 577 122 15 2132 2698 511309906 511309339 3.800000e-67 267.0
16 TraesCS4D01G113700 chr5B 86.897 145 19 0 1419 1563 511310331 511310187 5.130000e-36 163.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G113700 chr4D 94373229 94379619 6390 False 3990.466667 11803 100.0000 1 6391 3 chr4D.!!$F1 6390
1 TraesCS4D01G113700 chr4B 133588364 133593971 5607 False 7160.000000 7160 89.9390 1 5609 1 chr4B.!!$F1 5608
2 TraesCS4D01G113700 chr4A 486375084 486378923 3839 True 1009.640000 4218 92.0680 2483 6390 5 chr4A.!!$R1 3907
3 TraesCS4D01G113700 chr5D 423504754 423505816 1062 True 290.500000 364 78.1015 1423 2794 2 chr5D.!!$R1 1371
4 TraesCS4D01G113700 chr5A 536986779 536987831 1052 True 269.500000 333 77.6340 1423 2794 2 chr5A.!!$R1 1371
5 TraesCS4D01G113700 chr5B 511309339 511310331 992 True 215.000000 267 81.2300 1419 2698 2 chr5B.!!$R1 1279

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
737 759 0.247460 TGGTCTCTCACCTGCGATTG 59.753 55.000 0.00 0.0 46.98 2.67 F
1513 1544 0.109597 GCACAACGGAGCATGGAAAG 60.110 55.000 0.00 0.0 0.00 2.62 F
2898 2969 1.066286 GCAGGAAGAGAGTGCAGATGT 60.066 52.381 0.00 0.0 37.16 3.06 F
3725 3815 2.378445 TTCGCATCGGATCTGAAACA 57.622 45.000 8.65 0.0 0.00 2.83 F
5158 5277 0.252881 ACCCAGCAGATCAGGAGGAA 60.253 55.000 0.00 0.0 0.00 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2874 2945 0.034476 TGCACTCTCTTCCTGCACAG 59.966 55.000 0.00 0.0 36.00 3.66 R
2922 2993 1.610038 CAGGCTTGTCATCAGTGCAAA 59.390 47.619 0.00 0.0 0.00 3.68 R
3868 3958 0.032403 GGCACATGAGCTGCAACAAA 59.968 50.000 14.91 0.0 36.27 2.83 R
5199 5345 0.036294 CCTTGGAAACCTCTCCCGTC 60.036 60.000 0.00 0.0 34.22 4.79 R
6158 6387 0.320374 TCTCGGTTAGGCAGTGTTGG 59.680 55.000 0.00 0.0 0.00 3.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
83 84 3.495001 GCGCCGAGAAAATCTTTATAGCT 59.505 43.478 0.00 0.00 0.00 3.32
121 122 0.394899 AGCTTAGCTTCCCCATGCAC 60.395 55.000 0.00 0.00 33.89 4.57
131 132 3.200593 CCATGCACGCCAGCTCTC 61.201 66.667 0.00 0.00 34.99 3.20
165 180 2.747855 CAGCTGCCCCTCGTTTCC 60.748 66.667 0.00 0.00 0.00 3.13
219 234 2.126618 GACGTGACGCATCGGTCA 60.127 61.111 4.25 0.00 44.25 4.02
247 262 4.537433 CTAGGCTGGCCCAGTCGC 62.537 72.222 13.35 0.00 41.46 5.19
296 311 3.394635 TTTGCCGCTCCGTATCCCC 62.395 63.158 0.00 0.00 0.00 4.81
297 312 4.853142 TGCCGCTCCGTATCCCCT 62.853 66.667 0.00 0.00 0.00 4.79
298 313 2.599578 GCCGCTCCGTATCCCCTA 60.600 66.667 0.00 0.00 0.00 3.53
299 314 1.982938 GCCGCTCCGTATCCCCTAT 60.983 63.158 0.00 0.00 0.00 2.57
300 315 1.946475 GCCGCTCCGTATCCCCTATC 61.946 65.000 0.00 0.00 0.00 2.08
301 316 1.321074 CCGCTCCGTATCCCCTATCC 61.321 65.000 0.00 0.00 0.00 2.59
302 317 1.321074 CGCTCCGTATCCCCTATCCC 61.321 65.000 0.00 0.00 0.00 3.85
327 342 2.278661 GCCGCGACCAGTACTAGC 60.279 66.667 8.23 0.00 0.00 3.42
332 347 1.267932 CGCGACCAGTACTAGCACTAC 60.268 57.143 0.00 0.00 0.00 2.73
333 348 2.015587 GCGACCAGTACTAGCACTACT 58.984 52.381 0.00 0.00 0.00 2.57
334 349 2.031930 GCGACCAGTACTAGCACTACTC 59.968 54.545 0.00 0.00 0.00 2.59
335 350 3.533547 CGACCAGTACTAGCACTACTCT 58.466 50.000 0.00 0.00 0.00 3.24
336 351 4.691175 CGACCAGTACTAGCACTACTCTA 58.309 47.826 0.00 0.00 0.00 2.43
337 352 4.507388 CGACCAGTACTAGCACTACTCTAC 59.493 50.000 0.00 0.00 0.00 2.59
338 353 4.779696 ACCAGTACTAGCACTACTCTACC 58.220 47.826 0.00 0.00 0.00 3.18
339 354 4.226846 ACCAGTACTAGCACTACTCTACCA 59.773 45.833 0.00 0.00 0.00 3.25
340 355 4.817464 CCAGTACTAGCACTACTCTACCAG 59.183 50.000 0.00 0.00 0.00 4.00
341 356 5.430007 CAGTACTAGCACTACTCTACCAGT 58.570 45.833 0.00 0.00 39.41 4.00
342 357 6.407865 CCAGTACTAGCACTACTCTACCAGTA 60.408 46.154 0.00 0.00 36.43 2.74
343 358 6.479660 CAGTACTAGCACTACTCTACCAGTAC 59.520 46.154 0.00 0.00 36.43 2.73
344 359 5.697082 ACTAGCACTACTCTACCAGTACT 57.303 43.478 0.00 0.00 36.43 2.73
345 360 6.805016 ACTAGCACTACTCTACCAGTACTA 57.195 41.667 0.00 0.00 36.43 1.82
346 361 6.819284 ACTAGCACTACTCTACCAGTACTAG 58.181 44.000 0.00 7.23 37.59 2.57
347 362 5.697082 AGCACTACTCTACCAGTACTAGT 57.303 43.478 0.00 0.00 36.43 2.57
348 363 6.805016 AGCACTACTCTACCAGTACTAGTA 57.195 41.667 0.00 0.00 36.43 1.82
349 364 6.819284 AGCACTACTCTACCAGTACTAGTAG 58.181 44.000 19.04 19.04 43.34 2.57
351 366 7.563188 AGCACTACTCTACCAGTACTAGTAGTA 59.437 40.741 24.83 15.39 46.83 1.82
352 367 7.867403 GCACTACTCTACCAGTACTAGTAGTAG 59.133 44.444 24.83 22.71 46.83 2.57
353 368 8.912988 CACTACTCTACCAGTACTAGTAGTAGT 58.087 40.741 24.83 23.18 46.83 2.73
362 377 6.407865 CCAGTACTAGTAGTAGTAGTCCAGCA 60.408 46.154 18.93 1.39 41.62 4.41
365 380 8.367156 AGTACTAGTAGTAGTAGTCCAGCATAC 58.633 40.741 18.93 11.05 40.14 2.39
374 389 3.689872 AGTCCAGCATACCTTCCTCTA 57.310 47.619 0.00 0.00 0.00 2.43
382 397 3.511934 GCATACCTTCCTCTACCATCGAT 59.488 47.826 0.00 0.00 0.00 3.59
384 399 2.599677 ACCTTCCTCTACCATCGATCC 58.400 52.381 0.00 0.00 0.00 3.36
390 405 1.076350 CTCTACCATCGATCCCCCTCT 59.924 57.143 0.00 0.00 0.00 3.69
405 420 1.753073 CCCTCTCAATCCATTGCCAAC 59.247 52.381 0.00 0.00 37.68 3.77
406 421 2.449464 CCTCTCAATCCATTGCCAACA 58.551 47.619 0.00 0.00 37.68 3.33
421 436 0.251916 CAACATCGGAGCCTGGGTAA 59.748 55.000 0.00 0.00 0.00 2.85
531 546 2.232941 GAGAAGTACCCCAACATCGTCA 59.767 50.000 0.00 0.00 0.00 4.35
623 638 1.331756 GACATGAACGGCATCATCCAC 59.668 52.381 0.00 0.00 37.96 4.02
624 639 0.305617 CATGAACGGCATCATCCACG 59.694 55.000 0.15 0.00 37.96 4.94
663 678 3.454371 ACCAGACGGTAACTCATATGC 57.546 47.619 0.00 0.00 46.71 3.14
701 723 1.268589 CCATGTACGATCTCGCGAGTT 60.269 52.381 33.33 26.51 44.43 3.01
717 739 2.352814 CGAGTTCTTGGTCGATCTGGTT 60.353 50.000 0.00 0.00 38.50 3.67
725 747 1.550976 GGTCGATCTGGTTTGGTCTCT 59.449 52.381 0.00 0.00 0.00 3.10
737 759 0.247460 TGGTCTCTCACCTGCGATTG 59.753 55.000 0.00 0.00 46.98 2.67
789 811 1.325904 CGACGTTCGACGAGGTGTTC 61.326 60.000 10.87 0.00 46.05 3.18
791 813 2.078914 CGTTCGACGAGGTGTTCCG 61.079 63.158 0.00 0.00 46.05 4.30
804 826 0.611200 TGTTCCGGTCCATGTTCGAT 59.389 50.000 0.00 0.00 0.00 3.59
875 903 2.278013 GTAGGTTCGCTCGCTCCG 60.278 66.667 0.00 0.00 0.00 4.63
899 927 2.765135 CTCTTCTTCCTCAGCATCCAGA 59.235 50.000 0.00 0.00 0.00 3.86
900 928 2.499289 TCTTCTTCCTCAGCATCCAGAC 59.501 50.000 0.00 0.00 0.00 3.51
901 929 1.942776 TCTTCCTCAGCATCCAGACA 58.057 50.000 0.00 0.00 0.00 3.41
902 930 2.259917 TCTTCCTCAGCATCCAGACAA 58.740 47.619 0.00 0.00 0.00 3.18
903 931 2.027745 TCTTCCTCAGCATCCAGACAAC 60.028 50.000 0.00 0.00 0.00 3.32
904 932 0.247460 TCCTCAGCATCCAGACAACG 59.753 55.000 0.00 0.00 0.00 4.10
905 933 0.247460 CCTCAGCATCCAGACAACGA 59.753 55.000 0.00 0.00 0.00 3.85
906 934 1.338105 CCTCAGCATCCAGACAACGAA 60.338 52.381 0.00 0.00 0.00 3.85
907 935 1.728971 CTCAGCATCCAGACAACGAAC 59.271 52.381 0.00 0.00 0.00 3.95
908 936 1.344438 TCAGCATCCAGACAACGAACT 59.656 47.619 0.00 0.00 0.00 3.01
909 937 1.728971 CAGCATCCAGACAACGAACTC 59.271 52.381 0.00 0.00 0.00 3.01
910 938 1.620819 AGCATCCAGACAACGAACTCT 59.379 47.619 0.00 0.00 0.00 3.24
911 939 1.728971 GCATCCAGACAACGAACTCTG 59.271 52.381 0.00 0.00 34.73 3.35
912 940 1.728971 CATCCAGACAACGAACTCTGC 59.271 52.381 0.00 0.00 33.77 4.26
913 941 0.750249 TCCAGACAACGAACTCTGCA 59.250 50.000 0.00 0.00 33.77 4.41
914 942 1.344438 TCCAGACAACGAACTCTGCAT 59.656 47.619 0.00 0.00 33.77 3.96
915 943 1.728971 CCAGACAACGAACTCTGCATC 59.271 52.381 0.00 0.00 33.77 3.91
916 944 1.728971 CAGACAACGAACTCTGCATCC 59.271 52.381 0.00 0.00 0.00 3.51
917 945 1.344438 AGACAACGAACTCTGCATCCA 59.656 47.619 0.00 0.00 0.00 3.41
918 946 1.728971 GACAACGAACTCTGCATCCAG 59.271 52.381 0.00 0.00 40.54 3.86
930 958 0.391661 GCATCCAGCTTCGTCCTCAA 60.392 55.000 0.00 0.00 41.15 3.02
934 962 0.951040 CCAGCTTCGTCCTCAACACC 60.951 60.000 0.00 0.00 0.00 4.16
1044 1072 4.740822 AAATCCGCCAAGGCCGCT 62.741 61.111 5.34 0.00 40.77 5.52
1074 1102 4.607778 GCCGTACGTGAAACTTCTTCTTTC 60.608 45.833 15.21 0.00 31.75 2.62
1092 1120 9.553064 TCTTCTTTCCTTCTATATCTGCATTTC 57.447 33.333 0.00 0.00 0.00 2.17
1101 1129 7.083062 TCTATATCTGCATTTCCATTCCTGT 57.917 36.000 0.00 0.00 0.00 4.00
1110 1138 5.713025 CATTTCCATTCCTGTAACCTTGTG 58.287 41.667 0.00 0.00 0.00 3.33
1112 1140 4.715534 TCCATTCCTGTAACCTTGTGAA 57.284 40.909 0.00 0.00 0.00 3.18
1113 1141 5.255397 TCCATTCCTGTAACCTTGTGAAT 57.745 39.130 0.00 0.00 0.00 2.57
1114 1142 5.253330 TCCATTCCTGTAACCTTGTGAATC 58.747 41.667 0.00 0.00 0.00 2.52
1115 1143 5.009631 CCATTCCTGTAACCTTGTGAATCA 58.990 41.667 0.00 0.00 0.00 2.57
1116 1144 5.124457 CCATTCCTGTAACCTTGTGAATCAG 59.876 44.000 0.00 0.00 0.00 2.90
1117 1145 4.974645 TCCTGTAACCTTGTGAATCAGT 57.025 40.909 0.00 0.00 0.00 3.41
1118 1146 5.304686 TCCTGTAACCTTGTGAATCAGTT 57.695 39.130 0.00 0.00 0.00 3.16
1119 1147 5.063204 TCCTGTAACCTTGTGAATCAGTTG 58.937 41.667 0.00 0.00 0.00 3.16
1120 1148 5.063204 CCTGTAACCTTGTGAATCAGTTGA 58.937 41.667 0.00 0.00 0.00 3.18
1121 1149 5.530915 CCTGTAACCTTGTGAATCAGTTGAA 59.469 40.000 0.00 0.00 0.00 2.69
1122 1150 6.207417 CCTGTAACCTTGTGAATCAGTTGAAT 59.793 38.462 0.00 0.00 0.00 2.57
1159 1187 1.481772 CTTCCAGGAGCTTGAGGAGAG 59.518 57.143 0.00 0.00 0.00 3.20
1160 1188 0.975040 TCCAGGAGCTTGAGGAGAGC 60.975 60.000 0.00 0.00 40.43 4.09
1161 1189 1.263342 CCAGGAGCTTGAGGAGAGCA 61.263 60.000 0.00 0.00 42.56 4.26
1229 1257 2.094659 CGATGCACCACGTGAGGTC 61.095 63.158 19.30 6.71 40.77 3.85
1280 1308 2.266554 GAGTTCATGGAGAAGCTGTCG 58.733 52.381 0.00 0.00 36.78 4.35
1295 1323 3.807538 TCGGCCGCACTCGAGTAC 61.808 66.667 23.51 12.31 38.10 2.73
1320 1348 3.426568 GAGCACGGTTGAGCAGCC 61.427 66.667 0.00 0.00 33.73 4.85
1355 1383 3.264104 AGACGTCAAGGTTTTGTTTCGA 58.736 40.909 19.50 0.00 35.73 3.71
1361 1389 4.382754 GTCAAGGTTTTGTTTCGATCATGC 59.617 41.667 0.00 0.00 35.73 4.06
1387 1415 4.735985 TGCAGCAAATGTATCATGTGAAC 58.264 39.130 0.00 0.00 0.00 3.18
1513 1544 0.109597 GCACAACGGAGCATGGAAAG 60.110 55.000 0.00 0.00 0.00 2.62
1569 1603 5.164954 GGCTGGTACGAAATTTAATTGCAA 58.835 37.500 0.00 0.00 0.00 4.08
1572 1606 7.226772 GCTGGTACGAAATTTAATTGCAAAAG 58.773 34.615 1.71 0.00 0.00 2.27
1593 1627 4.260170 AGGAACTTGATTGTCTCTGATGC 58.740 43.478 0.00 0.00 27.25 3.91
1594 1628 3.063180 GGAACTTGATTGTCTCTGATGCG 59.937 47.826 0.00 0.00 0.00 4.73
1595 1629 2.625737 ACTTGATTGTCTCTGATGCGG 58.374 47.619 0.00 0.00 0.00 5.69
1599 1633 2.208431 GATTGTCTCTGATGCGGAAGG 58.792 52.381 0.00 0.00 0.00 3.46
1600 1634 1.266178 TTGTCTCTGATGCGGAAGGA 58.734 50.000 0.00 0.00 0.00 3.36
1601 1635 1.266178 TGTCTCTGATGCGGAAGGAA 58.734 50.000 0.00 0.00 32.68 3.36
1602 1636 1.066858 TGTCTCTGATGCGGAAGGAAC 60.067 52.381 0.00 0.00 32.68 3.62
1621 1655 5.103515 AGGAACTTTATGGGCTGGTATGAAT 60.104 40.000 0.00 0.00 27.25 2.57
1623 1657 6.098266 GGAACTTTATGGGCTGGTATGAATTT 59.902 38.462 0.00 0.00 0.00 1.82
1693 1752 1.086696 GCTTGCTTTGGCGTCTCATA 58.913 50.000 0.00 0.00 42.25 2.15
1738 1797 3.536570 GAGGTAGCTTGTTCATCCCTTC 58.463 50.000 0.00 0.00 0.00 3.46
1744 1803 2.746362 GCTTGTTCATCCCTTCTCAGTG 59.254 50.000 0.00 0.00 0.00 3.66
1745 1804 3.557898 GCTTGTTCATCCCTTCTCAGTGA 60.558 47.826 0.00 0.00 0.00 3.41
1756 1815 3.431486 CCTTCTCAGTGATAACTCCAGGC 60.431 52.174 0.00 0.00 0.00 4.85
1779 1838 5.640357 GCACCAATGAAATGTTGAACATGAT 59.360 36.000 12.09 4.07 37.97 2.45
1780 1839 6.148150 GCACCAATGAAATGTTGAACATGATT 59.852 34.615 12.09 3.15 37.97 2.57
1781 1840 7.331440 GCACCAATGAAATGTTGAACATGATTA 59.669 33.333 12.09 1.70 37.97 1.75
1782 1841 9.205719 CACCAATGAAATGTTGAACATGATTAA 57.794 29.630 12.09 0.00 37.97 1.40
1783 1842 9.206870 ACCAATGAAATGTTGAACATGATTAAC 57.793 29.630 12.09 1.00 37.97 2.01
1784 1843 8.374728 CCAATGAAATGTTGAACATGATTAACG 58.625 33.333 12.09 0.00 37.97 3.18
1785 1844 6.926280 TGAAATGTTGAACATGATTAACGC 57.074 33.333 12.09 0.00 37.97 4.84
1791 1850 4.700268 TGAACATGATTAACGCTGCAAT 57.300 36.364 0.00 0.00 0.00 3.56
1821 1880 4.761739 TGCAGCATATGGAATTTACTAGGC 59.238 41.667 4.56 0.00 0.00 3.93
1890 1949 4.511082 GCATTGGAGCTGAGAATACTCTTC 59.489 45.833 0.00 0.00 42.99 2.87
1897 1956 7.124901 TGGAGCTGAGAATACTCTTCTGTAAAT 59.875 37.037 0.00 0.00 42.99 1.40
1947 2006 3.010584 ACCAGCCAGATATTTGTGTTCCT 59.989 43.478 0.00 0.00 0.00 3.36
1955 2014 5.934043 CAGATATTTGTGTTCCTGTGACTGA 59.066 40.000 0.00 0.00 0.00 3.41
1958 2017 8.321353 AGATATTTGTGTTCCTGTGACTGATAA 58.679 33.333 0.00 0.00 0.00 1.75
1965 2024 7.132863 GTGTTCCTGTGACTGATAAAAGTTTC 58.867 38.462 0.00 0.00 0.00 2.78
2117 2177 6.596309 TCTCATTCTGACTATGCGGATAAT 57.404 37.500 0.00 0.00 0.00 1.28
2202 2262 1.211949 ACTATACCGGGTTGCAAGCAT 59.788 47.619 28.22 16.06 0.00 3.79
2427 2490 5.060506 TCTCATTGACGTGTACAAAACCAT 58.939 37.500 0.00 0.00 0.00 3.55
2676 2739 2.427453 TGAACTGCGAGAGGTATCTTCC 59.573 50.000 0.00 0.00 35.30 3.46
2724 2794 5.861251 CACTCCTACTTAGCATTCGATCATC 59.139 44.000 0.00 0.00 0.00 2.92
2841 2911 8.027771 GTGGTAAGGATTAGTTATAGTCGATGG 58.972 40.741 0.00 0.00 0.00 3.51
2874 2945 4.511082 GCACAGAGATCTAATTGGCTCTTC 59.489 45.833 0.00 0.00 35.66 2.87
2898 2969 1.066286 GCAGGAAGAGAGTGCAGATGT 60.066 52.381 0.00 0.00 37.16 3.06
2912 2983 3.181451 TGCAGATGTCCTTGAACAAGAGT 60.181 43.478 14.99 0.00 40.79 3.24
3073 3155 7.551585 TGAGAATACCTTAGAGCTGAAAAGAG 58.448 38.462 0.00 0.00 0.00 2.85
3498 3583 5.455056 AGTTGGTAGGACGAAGCATATAG 57.545 43.478 0.00 0.00 0.00 1.31
3499 3584 4.894114 AGTTGGTAGGACGAAGCATATAGT 59.106 41.667 0.00 0.00 0.00 2.12
3500 3585 4.848562 TGGTAGGACGAAGCATATAGTG 57.151 45.455 0.00 0.00 0.00 2.74
3725 3815 2.378445 TTCGCATCGGATCTGAAACA 57.622 45.000 8.65 0.00 0.00 2.83
3950 4040 3.875134 CCACGATACAAATGTTCTACCCC 59.125 47.826 0.00 0.00 0.00 4.95
4047 4149 3.391506 CCAGATCTGGCGATTGATACA 57.608 47.619 28.45 0.00 44.73 2.29
4050 4152 3.492383 CAGATCTGGCGATTGATACACAC 59.508 47.826 15.38 0.00 0.00 3.82
4089 4191 3.202906 GCAAGTAAGCCATCCGTTCATA 58.797 45.455 0.00 0.00 0.00 2.15
4094 4196 1.597742 AGCCATCCGTTCATATGCAC 58.402 50.000 0.00 0.00 0.00 4.57
4098 4200 3.058914 GCCATCCGTTCATATGCACTAAC 60.059 47.826 3.99 0.07 0.00 2.34
4142 4244 2.076100 CCAACGCAAGCTGATCAAGTA 58.924 47.619 0.00 0.00 45.62 2.24
4143 4245 2.094894 CCAACGCAAGCTGATCAAGTAG 59.905 50.000 0.00 0.00 45.62 2.57
4144 4246 2.738846 CAACGCAAGCTGATCAAGTAGT 59.261 45.455 0.00 0.00 45.62 2.73
4145 4247 3.045601 ACGCAAGCTGATCAAGTAGTT 57.954 42.857 0.00 0.00 45.62 2.24
4146 4248 2.738846 ACGCAAGCTGATCAAGTAGTTG 59.261 45.455 3.73 3.73 45.62 3.16
4148 4250 3.424039 CGCAAGCTGATCAAGTAGTTGTG 60.424 47.826 10.08 0.95 34.98 3.33
4251 4362 3.496130 CAGCCACACAAACAGTAGAGAAG 59.504 47.826 0.00 0.00 0.00 2.85
4278 4389 6.960468 TCTCGCAGTATGTATTCTCAACTAG 58.040 40.000 0.00 0.00 39.31 2.57
4279 4390 6.542735 TCTCGCAGTATGTATTCTCAACTAGT 59.457 38.462 0.00 0.00 39.31 2.57
4280 4391 7.713942 TCTCGCAGTATGTATTCTCAACTAGTA 59.286 37.037 0.00 0.00 39.31 1.82
4281 4392 7.637229 TCGCAGTATGTATTCTCAACTAGTAC 58.363 38.462 0.00 0.00 39.31 2.73
4293 4407 5.700832 TCTCAACTAGTACAAACCAGCATTG 59.299 40.000 0.00 0.00 0.00 2.82
4302 4416 4.175516 ACAAACCAGCATTGCATAAATCG 58.824 39.130 11.91 0.00 0.00 3.34
4303 4417 2.497107 ACCAGCATTGCATAAATCGC 57.503 45.000 11.91 0.00 0.00 4.58
4313 4427 4.495911 TGCATAAATCGCAAGTCACAAA 57.504 36.364 0.00 0.00 36.17 2.83
4314 4428 4.475028 TGCATAAATCGCAAGTCACAAAG 58.525 39.130 0.00 0.00 36.17 2.77
4321 4435 4.200838 TCGCAAGTCACAAAGATATGGA 57.799 40.909 0.00 0.00 39.48 3.41
4353 4467 2.984471 GTTTGCACATCAGTTGCATGAG 59.016 45.455 0.00 0.00 38.43 2.90
4392 4506 4.533815 TCCGGCAAGAGAAGATCTTACTA 58.466 43.478 8.25 0.00 46.91 1.82
4393 4507 4.338682 TCCGGCAAGAGAAGATCTTACTAC 59.661 45.833 8.25 7.12 46.91 2.73
4403 4517 7.066525 AGAGAAGATCTTACTACGGAACTCAAG 59.933 40.741 8.25 0.00 32.99 3.02
4557 4671 3.773667 TCAGAGCAATCTGAACTGATCCT 59.226 43.478 5.50 0.00 43.03 3.24
4585 4699 7.886338 ACTTTCCTTCACTTTTCCATCATAAC 58.114 34.615 0.00 0.00 0.00 1.89
4695 4809 4.155280 CACACATGATCAGACAATGCAAGA 59.845 41.667 0.00 0.00 0.00 3.02
4696 4810 4.763279 ACACATGATCAGACAATGCAAGAA 59.237 37.500 0.00 0.00 0.00 2.52
4697 4811 5.417894 ACACATGATCAGACAATGCAAGAAT 59.582 36.000 0.00 0.00 0.00 2.40
4814 4930 2.099141 TGTTCTTCAATCCTGAGGCG 57.901 50.000 0.00 0.00 31.69 5.52
4853 4969 1.585668 CTGCTCGACAATGTCATCGTC 59.414 52.381 14.24 0.00 39.38 4.20
4865 4981 1.002087 GTCATCGTCCCTGACAAGGTT 59.998 52.381 0.00 0.00 42.74 3.50
4877 4996 3.482436 TGACAAGGTTGGTTGGTATGAC 58.518 45.455 0.00 0.00 0.00 3.06
4941 5060 4.625028 TCGATCTCTGAATGTTATGCAGG 58.375 43.478 0.00 0.00 0.00 4.85
5118 5237 4.862823 GGCGGGGTAGAGGAGGCT 62.863 72.222 0.00 0.00 0.00 4.58
5151 5270 1.305297 ACCGAGACCCAGCAGATCA 60.305 57.895 0.00 0.00 0.00 2.92
5158 5277 0.252881 ACCCAGCAGATCAGGAGGAA 60.253 55.000 0.00 0.00 0.00 3.36
5166 5285 0.827368 GATCAGGAGGAACGGCTTCT 59.173 55.000 0.00 0.00 0.00 2.85
5223 5369 0.402121 GAGAGGTTTCCAAGGTGGCT 59.598 55.000 0.00 0.00 37.47 4.75
5236 5382 4.776322 TGGCTGGTTCGATGGCGG 62.776 66.667 0.00 0.00 38.28 6.13
5436 5582 2.225019 GTCTTCGTCGTTGGTCTCTACA 59.775 50.000 0.00 0.00 0.00 2.74
5437 5583 2.483106 TCTTCGTCGTTGGTCTCTACAG 59.517 50.000 0.00 0.00 0.00 2.74
5438 5584 1.888215 TCGTCGTTGGTCTCTACAGT 58.112 50.000 0.00 0.00 0.00 3.55
5439 5585 3.044235 TCGTCGTTGGTCTCTACAGTA 57.956 47.619 0.00 0.00 0.00 2.74
5440 5586 2.998670 TCGTCGTTGGTCTCTACAGTAG 59.001 50.000 0.47 0.47 0.00 2.57
5442 5588 3.928992 CGTCGTTGGTCTCTACAGTAGTA 59.071 47.826 7.50 0.00 0.00 1.82
5444 5590 4.934602 GTCGTTGGTCTCTACAGTAGTACT 59.065 45.833 7.50 0.00 0.00 2.73
5477 5623 3.951306 TGAAACATGAGCGTTTGTTGAG 58.049 40.909 0.00 0.00 39.17 3.02
5478 5624 3.625313 TGAAACATGAGCGTTTGTTGAGA 59.375 39.130 0.00 0.00 39.17 3.27
5479 5625 3.885484 AACATGAGCGTTTGTTGAGAG 57.115 42.857 0.00 0.00 34.87 3.20
5480 5626 1.532868 ACATGAGCGTTTGTTGAGAGC 59.467 47.619 0.00 0.00 0.00 4.09
5481 5627 1.802960 CATGAGCGTTTGTTGAGAGCT 59.197 47.619 0.00 0.00 41.29 4.09
5482 5628 1.953559 TGAGCGTTTGTTGAGAGCTT 58.046 45.000 0.00 0.00 38.39 3.74
5483 5629 1.599071 TGAGCGTTTGTTGAGAGCTTG 59.401 47.619 0.00 0.00 38.39 4.01
5484 5630 0.947244 AGCGTTTGTTGAGAGCTTGG 59.053 50.000 0.00 0.00 34.05 3.61
5604 5779 2.552599 TGACCGTCAAAGCCATTACA 57.447 45.000 0.00 0.00 0.00 2.41
5616 5794 6.714810 TCAAAGCCATTACAACTCTGTGTATT 59.285 34.615 0.00 0.00 36.96 1.89
5620 5798 8.807948 AGCCATTACAACTCTGTGTATTTTAT 57.192 30.769 0.00 0.00 36.96 1.40
5662 5841 2.959507 GCTTTATGGCGAATTTGGGT 57.040 45.000 0.00 0.00 0.00 4.51
5663 5842 3.245518 GCTTTATGGCGAATTTGGGTT 57.754 42.857 0.00 0.00 0.00 4.11
5664 5843 3.186909 GCTTTATGGCGAATTTGGGTTC 58.813 45.455 0.00 0.00 0.00 3.62
5665 5844 3.119137 GCTTTATGGCGAATTTGGGTTCT 60.119 43.478 0.00 0.00 0.00 3.01
5666 5845 4.620567 GCTTTATGGCGAATTTGGGTTCTT 60.621 41.667 0.00 0.00 0.00 2.52
5667 5846 5.476091 TTTATGGCGAATTTGGGTTCTTT 57.524 34.783 0.00 0.00 0.00 2.52
5668 5847 5.476091 TTATGGCGAATTTGGGTTCTTTT 57.524 34.783 0.00 0.00 0.00 2.27
5669 5848 3.104843 TGGCGAATTTGGGTTCTTTTG 57.895 42.857 0.00 0.00 0.00 2.44
5670 5849 2.432510 TGGCGAATTTGGGTTCTTTTGT 59.567 40.909 0.00 0.00 0.00 2.83
5671 5850 3.118592 TGGCGAATTTGGGTTCTTTTGTT 60.119 39.130 0.00 0.00 0.00 2.83
5672 5851 3.493129 GGCGAATTTGGGTTCTTTTGTTC 59.507 43.478 0.00 0.00 0.00 3.18
5673 5852 3.181575 GCGAATTTGGGTTCTTTTGTTCG 59.818 43.478 0.00 0.00 39.87 3.95
5674 5853 4.356289 CGAATTTGGGTTCTTTTGTTCGT 58.644 39.130 0.00 0.00 34.30 3.85
5675 5854 4.439776 CGAATTTGGGTTCTTTTGTTCGTC 59.560 41.667 0.00 0.00 34.30 4.20
5676 5855 3.408288 TTTGGGTTCTTTTGTTCGTCG 57.592 42.857 0.00 0.00 0.00 5.12
5677 5856 0.658897 TGGGTTCTTTTGTTCGTCGC 59.341 50.000 0.00 0.00 0.00 5.19
5678 5857 0.942252 GGGTTCTTTTGTTCGTCGCT 59.058 50.000 0.00 0.00 0.00 4.93
5679 5858 1.333791 GGGTTCTTTTGTTCGTCGCTG 60.334 52.381 0.00 0.00 0.00 5.18
5680 5859 1.385999 GTTCTTTTGTTCGTCGCTGC 58.614 50.000 0.00 0.00 0.00 5.25
5681 5860 0.042535 TTCTTTTGTTCGTCGCTGCG 60.043 50.000 17.25 17.25 0.00 5.18
5682 5861 2.052590 TTTTGTTCGTCGCTGCGC 60.053 55.556 18.65 11.63 0.00 6.09
5683 5862 3.515286 TTTTGTTCGTCGCTGCGCC 62.515 57.895 18.65 4.69 0.00 6.53
5684 5863 4.961511 TTGTTCGTCGCTGCGCCT 62.962 61.111 18.65 0.00 0.00 5.52
5685 5864 3.561217 TTGTTCGTCGCTGCGCCTA 62.561 57.895 18.65 0.00 0.00 3.93
5686 5865 2.807895 GTTCGTCGCTGCGCCTAA 60.808 61.111 18.65 0.56 0.00 2.69
5687 5866 2.165301 GTTCGTCGCTGCGCCTAAT 61.165 57.895 18.65 0.00 0.00 1.73
5688 5867 2.164663 TTCGTCGCTGCGCCTAATG 61.165 57.895 18.65 5.73 0.00 1.90
5689 5868 2.829043 TTCGTCGCTGCGCCTAATGT 62.829 55.000 18.65 0.00 0.00 2.71
5690 5869 2.452813 CGTCGCTGCGCCTAATGTT 61.453 57.895 18.65 0.00 0.00 2.71
5691 5870 1.794222 GTCGCTGCGCCTAATGTTT 59.206 52.632 18.65 0.00 0.00 2.83
5692 5871 0.521242 GTCGCTGCGCCTAATGTTTG 60.521 55.000 18.65 0.00 0.00 2.93
5693 5872 1.226379 CGCTGCGCCTAATGTTTGG 60.226 57.895 9.88 0.00 0.00 3.28
5694 5873 1.517039 GCTGCGCCTAATGTTTGGC 60.517 57.895 4.18 7.95 44.08 4.52
5700 5879 2.383368 GCCTAATGTTTGGCATTGCA 57.617 45.000 11.39 0.00 46.40 4.08
5701 5880 2.697654 GCCTAATGTTTGGCATTGCAA 58.302 42.857 11.39 0.00 46.40 4.08
5702 5881 3.072944 GCCTAATGTTTGGCATTGCAAA 58.927 40.909 11.39 1.96 46.40 3.68
5703 5882 3.690628 GCCTAATGTTTGGCATTGCAAAT 59.309 39.130 11.39 0.00 46.40 2.32
5704 5883 4.156373 GCCTAATGTTTGGCATTGCAAATT 59.844 37.500 11.39 0.00 46.40 1.82
5705 5884 5.335819 GCCTAATGTTTGGCATTGCAAATTT 60.336 36.000 11.39 9.33 46.40 1.82
5706 5885 6.316319 CCTAATGTTTGGCATTGCAAATTTC 58.684 36.000 11.39 0.73 46.40 2.17
5707 5886 6.149807 CCTAATGTTTGGCATTGCAAATTTCT 59.850 34.615 11.39 0.00 46.40 2.52
5708 5887 5.616488 ATGTTTGGCATTGCAAATTTCTC 57.384 34.783 11.39 0.00 33.14 2.87
5709 5888 3.493877 TGTTTGGCATTGCAAATTTCTCG 59.506 39.130 11.39 0.00 0.00 4.04
5710 5889 1.712401 TGGCATTGCAAATTTCTCGC 58.288 45.000 11.39 0.00 0.00 5.03
5711 5890 1.001624 GGCATTGCAAATTTCTCGCC 58.998 50.000 11.39 3.60 0.00 5.54
5712 5891 1.001624 GCATTGCAAATTTCTCGCCC 58.998 50.000 1.71 0.00 0.00 6.13
5713 5892 1.404583 GCATTGCAAATTTCTCGCCCT 60.405 47.619 1.71 0.00 0.00 5.19
5714 5893 2.932187 GCATTGCAAATTTCTCGCCCTT 60.932 45.455 1.71 0.00 0.00 3.95
5715 5894 2.437200 TTGCAAATTTCTCGCCCTTG 57.563 45.000 0.00 0.00 0.00 3.61
5716 5895 1.327303 TGCAAATTTCTCGCCCTTGT 58.673 45.000 0.00 0.00 0.00 3.16
5717 5896 1.686052 TGCAAATTTCTCGCCCTTGTT 59.314 42.857 0.00 0.00 0.00 2.83
5718 5897 2.102252 TGCAAATTTCTCGCCCTTGTTT 59.898 40.909 0.00 0.00 0.00 2.83
5719 5898 2.476241 GCAAATTTCTCGCCCTTGTTTG 59.524 45.455 0.00 0.00 0.00 2.93
5720 5899 3.716601 CAAATTTCTCGCCCTTGTTTGT 58.283 40.909 0.00 0.00 0.00 2.83
5721 5900 3.643159 AATTTCTCGCCCTTGTTTGTC 57.357 42.857 0.00 0.00 0.00 3.18
5722 5901 2.341846 TTTCTCGCCCTTGTTTGTCT 57.658 45.000 0.00 0.00 0.00 3.41
5723 5902 2.341846 TTCTCGCCCTTGTTTGTCTT 57.658 45.000 0.00 0.00 0.00 3.01
5724 5903 1.593196 TCTCGCCCTTGTTTGTCTTG 58.407 50.000 0.00 0.00 0.00 3.02
5725 5904 0.040067 CTCGCCCTTGTTTGTCTTGC 60.040 55.000 0.00 0.00 0.00 4.01
5726 5905 0.465460 TCGCCCTTGTTTGTCTTGCT 60.465 50.000 0.00 0.00 0.00 3.91
5727 5906 1.202710 TCGCCCTTGTTTGTCTTGCTA 60.203 47.619 0.00 0.00 0.00 3.49
5728 5907 1.606668 CGCCCTTGTTTGTCTTGCTAA 59.393 47.619 0.00 0.00 0.00 3.09
5729 5908 2.228822 CGCCCTTGTTTGTCTTGCTAAT 59.771 45.455 0.00 0.00 0.00 1.73
5730 5909 3.578688 GCCCTTGTTTGTCTTGCTAATG 58.421 45.455 0.00 0.00 0.00 1.90
5731 5910 3.005791 GCCCTTGTTTGTCTTGCTAATGT 59.994 43.478 0.00 0.00 0.00 2.71
5732 5911 4.501400 GCCCTTGTTTGTCTTGCTAATGTT 60.501 41.667 0.00 0.00 0.00 2.71
5733 5912 5.600696 CCCTTGTTTGTCTTGCTAATGTTT 58.399 37.500 0.00 0.00 0.00 2.83
5734 5913 5.463061 CCCTTGTTTGTCTTGCTAATGTTTG 59.537 40.000 0.00 0.00 0.00 2.93
5735 5914 5.463061 CCTTGTTTGTCTTGCTAATGTTTGG 59.537 40.000 0.00 0.00 0.00 3.28
5763 5942 3.643159 AATTTCTCGCCCTTGTTTGTC 57.357 42.857 0.00 0.00 0.00 3.18
5789 5968 0.250901 CCAGAAAGGTGTGGACAGGG 60.251 60.000 0.00 0.00 40.79 4.45
5795 5974 1.978617 GGTGTGGACAGGGGCATTG 60.979 63.158 0.00 0.00 0.00 2.82
5798 5977 0.774276 TGTGGACAGGGGCATTGTAA 59.226 50.000 0.00 0.00 0.00 2.41
5803 5982 2.120909 CAGGGGCATTGTAAGGCGG 61.121 63.158 0.00 0.00 36.39 6.13
5816 5995 5.155278 TGTAAGGCGGTTTTCTTCATCTA 57.845 39.130 0.00 0.00 0.00 1.98
5817 5996 5.553123 TGTAAGGCGGTTTTCTTCATCTAA 58.447 37.500 0.00 0.00 0.00 2.10
5881 6060 3.552604 TTGAGATTGCTTTTACCACGC 57.447 42.857 0.00 0.00 0.00 5.34
5882 6061 2.778299 TGAGATTGCTTTTACCACGCT 58.222 42.857 0.00 0.00 0.00 5.07
5883 6062 3.146066 TGAGATTGCTTTTACCACGCTT 58.854 40.909 0.00 0.00 0.00 4.68
5884 6063 4.320023 TGAGATTGCTTTTACCACGCTTA 58.680 39.130 0.00 0.00 0.00 3.09
5885 6064 4.153475 TGAGATTGCTTTTACCACGCTTAC 59.847 41.667 0.00 0.00 0.00 2.34
5886 6065 3.439129 AGATTGCTTTTACCACGCTTACC 59.561 43.478 0.00 0.00 0.00 2.85
5887 6066 2.257691 TGCTTTTACCACGCTTACCA 57.742 45.000 0.00 0.00 0.00 3.25
5888 6067 2.573369 TGCTTTTACCACGCTTACCAA 58.427 42.857 0.00 0.00 0.00 3.67
5889 6068 2.550606 TGCTTTTACCACGCTTACCAAG 59.449 45.455 0.00 0.00 0.00 3.61
5890 6069 2.551032 GCTTTTACCACGCTTACCAAGT 59.449 45.455 0.00 0.00 0.00 3.16
5891 6070 3.608474 GCTTTTACCACGCTTACCAAGTG 60.608 47.826 0.00 0.00 44.44 3.16
5905 6084 2.503331 CCAAGTGGTTGCTCACATACA 58.497 47.619 7.82 0.00 39.93 2.29
5906 6085 3.084039 CCAAGTGGTTGCTCACATACAT 58.916 45.455 7.82 0.00 39.93 2.29
5907 6086 3.119743 CCAAGTGGTTGCTCACATACATG 60.120 47.826 0.00 0.00 39.93 3.21
5908 6087 3.423539 AGTGGTTGCTCACATACATGT 57.576 42.857 2.69 2.69 42.84 3.21
5909 6088 3.754965 AGTGGTTGCTCACATACATGTT 58.245 40.909 2.30 0.00 39.39 2.71
5914 6093 4.336433 GGTTGCTCACATACATGTTATGCT 59.664 41.667 2.30 0.00 39.39 3.79
5940 6119 5.977725 GCATACTCTATTTCTGTGAACGCTA 59.022 40.000 0.00 0.00 0.00 4.26
5941 6120 6.143118 GCATACTCTATTTCTGTGAACGCTAG 59.857 42.308 0.00 0.00 0.00 3.42
5942 6121 4.425520 ACTCTATTTCTGTGAACGCTAGC 58.574 43.478 4.06 4.06 0.00 3.42
5943 6122 4.158764 ACTCTATTTCTGTGAACGCTAGCT 59.841 41.667 13.93 0.00 0.00 3.32
5946 6125 5.932303 TCTATTTCTGTGAACGCTAGCTTTT 59.068 36.000 13.93 5.61 0.00 2.27
5986 6165 2.377628 GACCAGACGGACAAGCACCA 62.378 60.000 0.00 0.00 35.59 4.17
5989 6168 0.532862 CAGACGGACAAGCACCACTT 60.533 55.000 0.00 0.00 40.05 3.16
6005 6184 6.040842 AGCACCACTTGGCATATTTTTATAGG 59.959 38.462 0.00 0.00 39.32 2.57
6009 6188 6.294731 CCACTTGGCATATTTTTATAGGAGGC 60.295 42.308 0.00 0.00 0.00 4.70
6044 6223 4.694760 TGCAGATACTGAGTTGGCATAT 57.305 40.909 0.00 0.00 32.44 1.78
6046 6225 5.541845 TGCAGATACTGAGTTGGCATATAC 58.458 41.667 0.00 0.00 32.44 1.47
6047 6226 5.070313 TGCAGATACTGAGTTGGCATATACA 59.930 40.000 0.00 0.00 32.44 2.29
6049 6228 6.091849 GCAGATACTGAGTTGGCATATACATG 59.908 42.308 0.00 0.00 32.44 3.21
6050 6229 7.381323 CAGATACTGAGTTGGCATATACATGA 58.619 38.462 0.00 0.00 31.47 3.07
6052 6231 7.875041 AGATACTGAGTTGGCATATACATGAAC 59.125 37.037 0.00 0.00 33.67 3.18
6053 6232 5.126067 ACTGAGTTGGCATATACATGAACC 58.874 41.667 0.00 0.00 33.67 3.62
6055 6234 5.368145 TGAGTTGGCATATACATGAACCTC 58.632 41.667 0.00 0.00 33.67 3.85
6056 6235 5.130975 TGAGTTGGCATATACATGAACCTCT 59.869 40.000 0.00 0.00 33.67 3.69
6057 6236 5.615289 AGTTGGCATATACATGAACCTCTC 58.385 41.667 0.00 0.00 33.67 3.20
6059 6238 4.234550 TGGCATATACATGAACCTCTCCT 58.765 43.478 0.00 0.00 33.67 3.69
6060 6239 4.284490 TGGCATATACATGAACCTCTCCTC 59.716 45.833 0.00 0.00 33.67 3.71
6098 6315 5.873179 TGTCGGAAAGCCTACAATAAAAG 57.127 39.130 0.00 0.00 36.97 2.27
6101 6318 5.583457 GTCGGAAAGCCTACAATAAAAGCTA 59.417 40.000 0.00 0.00 32.39 3.32
6104 6321 7.988599 TCGGAAAGCCTACAATAAAAGCTAATA 59.011 33.333 0.00 0.00 32.39 0.98
6176 6405 0.034896 ACCAACACTGCCTAACCGAG 59.965 55.000 0.00 0.00 0.00 4.63
6182 6411 2.829720 ACACTGCCTAACCGAGAATGTA 59.170 45.455 0.00 0.00 0.00 2.29
6184 6413 4.081087 ACACTGCCTAACCGAGAATGTATT 60.081 41.667 0.00 0.00 0.00 1.89
6185 6414 4.508124 CACTGCCTAACCGAGAATGTATTC 59.492 45.833 0.00 0.00 37.06 1.75
6186 6415 4.161565 ACTGCCTAACCGAGAATGTATTCA 59.838 41.667 7.30 0.00 39.23 2.57
6194 6423 9.914131 CTAACCGAGAATGTATTCATCATCTTA 57.086 33.333 7.30 0.00 39.23 2.10
6224 6456 3.937079 GCAACCAGTACCTGTACATTACC 59.063 47.826 9.90 0.00 38.48 2.85
6234 6466 4.020928 ACCTGTACATTACCGACATTCACA 60.021 41.667 0.00 0.00 0.00 3.58
6290 6522 9.360514 CATTTTCATCATTATAATTTGTTGCGC 57.639 29.630 0.00 0.00 0.00 6.09
6301 6533 9.658475 TTATAATTTGTTGCGCATAATAGTCAC 57.342 29.630 12.75 3.90 0.00 3.67
6303 6535 5.559427 TTTGTTGCGCATAATAGTCACAT 57.441 34.783 12.75 0.00 0.00 3.21
6313 6545 7.116948 GCGCATAATAGTCACATAAGAAGACAT 59.883 37.037 0.30 0.00 34.80 3.06
6344 6576 2.386661 ATGCCGAACAGACAACTAGG 57.613 50.000 0.00 0.00 0.00 3.02
6387 6619 0.178998 CATGGCATGAGAGGAAGGGG 60.179 60.000 22.91 0.00 0.00 4.79
6390 6622 0.106967 GGCATGAGAGGAAGGGGAAC 60.107 60.000 0.00 0.00 0.00 3.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 2.622546 TTTTCTCGGCGCCATAAAAC 57.377 45.000 28.98 0.00 0.00 2.43
59 60 2.102070 TAAAGATTTTCTCGGCGCCA 57.898 45.000 28.98 12.94 0.00 5.69
83 84 7.255035 GCTAAGCTAAGCAAATCAATGATGAGA 60.255 37.037 0.00 0.00 42.30 3.27
94 95 3.291584 GGGGAAGCTAAGCTAAGCAAAT 58.708 45.455 0.00 0.00 45.30 2.32
148 149 2.747855 GGAAACGAGGGGCAGCTG 60.748 66.667 10.11 10.11 0.00 4.24
219 234 2.625431 AGCCTAGGGGAGGGAGGT 60.625 66.667 11.72 0.00 46.81 3.85
222 237 4.499116 GCCAGCCTAGGGGAGGGA 62.499 72.222 11.72 0.00 46.81 4.20
247 262 0.695347 GAAGGGGATATGGAGGCAGG 59.305 60.000 0.00 0.00 0.00 4.85
296 311 4.647615 CGGCGTGGCGAGGGATAG 62.648 72.222 10.58 0.00 0.00 2.08
315 330 4.815846 GGTAGAGTAGTGCTAGTACTGGTC 59.184 50.000 22.20 17.14 34.66 4.02
332 347 8.576442 GGACTACTACTACTAGTACTGGTAGAG 58.424 44.444 38.23 31.36 44.36 2.43
333 348 8.061920 TGGACTACTACTACTAGTACTGGTAGA 58.938 40.741 38.23 25.28 44.36 2.59
334 349 8.243961 TGGACTACTACTACTAGTACTGGTAG 57.756 42.308 33.04 33.04 46.18 3.18
335 350 7.201956 GCTGGACTACTACTACTAGTACTGGTA 60.202 44.444 17.13 17.13 34.79 3.25
336 351 6.407979 GCTGGACTACTACTACTAGTACTGGT 60.408 46.154 16.68 16.68 34.79 4.00
337 352 5.990996 GCTGGACTACTACTACTAGTACTGG 59.009 48.000 5.39 4.89 34.79 4.00
338 353 6.580788 TGCTGGACTACTACTACTAGTACTG 58.419 44.000 5.39 0.00 34.79 2.74
339 354 6.805016 TGCTGGACTACTACTACTAGTACT 57.195 41.667 0.00 0.00 34.79 2.73
340 355 7.602265 GGTATGCTGGACTACTACTACTAGTAC 59.398 44.444 0.00 0.00 34.79 2.73
341 356 7.512058 AGGTATGCTGGACTACTACTACTAGTA 59.488 40.741 1.89 1.89 34.79 1.82
342 357 6.329723 AGGTATGCTGGACTACTACTACTAGT 59.670 42.308 0.00 0.00 37.04 2.57
343 358 6.771573 AGGTATGCTGGACTACTACTACTAG 58.228 44.000 0.00 0.00 0.00 2.57
344 359 6.760440 AGGTATGCTGGACTACTACTACTA 57.240 41.667 0.00 0.00 0.00 1.82
345 360 5.649970 AGGTATGCTGGACTACTACTACT 57.350 43.478 0.00 0.00 0.00 2.57
346 361 5.241285 GGAAGGTATGCTGGACTACTACTAC 59.759 48.000 0.00 0.00 0.00 2.73
347 362 5.133999 AGGAAGGTATGCTGGACTACTACTA 59.866 44.000 0.00 0.00 0.00 1.82
348 363 4.079096 AGGAAGGTATGCTGGACTACTACT 60.079 45.833 0.00 0.00 0.00 2.57
349 364 4.216708 AGGAAGGTATGCTGGACTACTAC 58.783 47.826 0.00 0.00 0.00 2.73
350 365 4.168283 AGAGGAAGGTATGCTGGACTACTA 59.832 45.833 0.00 0.00 0.00 1.82
351 366 3.052490 AGAGGAAGGTATGCTGGACTACT 60.052 47.826 0.00 0.00 0.00 2.57
352 367 3.301274 AGAGGAAGGTATGCTGGACTAC 58.699 50.000 0.00 0.00 0.00 2.73
353 368 3.689872 AGAGGAAGGTATGCTGGACTA 57.310 47.619 0.00 0.00 0.00 2.59
362 377 4.345854 GGATCGATGGTAGAGGAAGGTAT 58.654 47.826 0.54 0.00 0.00 2.73
365 380 1.896465 GGGATCGATGGTAGAGGAAGG 59.104 57.143 0.54 0.00 0.00 3.46
374 389 0.031111 TTGAGAGGGGGATCGATGGT 60.031 55.000 0.54 0.00 0.00 3.55
382 397 0.552848 GCAATGGATTGAGAGGGGGA 59.447 55.000 3.47 0.00 40.14 4.81
384 399 0.259647 TGGCAATGGATTGAGAGGGG 59.740 55.000 3.47 0.00 40.14 4.79
390 405 1.750206 CCGATGTTGGCAATGGATTGA 59.250 47.619 1.92 0.00 40.14 2.57
405 420 1.341531 CTACTTACCCAGGCTCCGATG 59.658 57.143 0.00 0.00 0.00 3.84
406 421 1.705873 CTACTTACCCAGGCTCCGAT 58.294 55.000 0.00 0.00 0.00 4.18
464 479 4.609018 CCCATGGCGGTCGGCTAG 62.609 72.222 17.23 9.68 42.94 3.42
571 586 3.845472 CGAAGTAAACGGCGGCGG 61.845 66.667 35.05 17.25 0.00 6.13
701 723 1.697432 ACCAAACCAGATCGACCAAGA 59.303 47.619 0.00 0.00 0.00 3.02
725 747 3.252964 CGCAACAATCGCAGGTGA 58.747 55.556 0.00 0.00 0.00 4.02
789 811 2.303163 TGTAATCGAACATGGACCGG 57.697 50.000 0.00 0.00 0.00 5.28
867 890 0.099791 GAAGAAGAGGACGGAGCGAG 59.900 60.000 0.00 0.00 0.00 5.03
875 903 2.158971 GGATGCTGAGGAAGAAGAGGAC 60.159 54.545 0.00 0.00 0.00 3.85
899 927 1.800805 CTGGATGCAGAGTTCGTTGT 58.199 50.000 8.85 0.00 0.00 3.32
900 928 0.445436 GCTGGATGCAGAGTTCGTTG 59.555 55.000 19.59 0.00 42.31 4.10
901 929 0.322975 AGCTGGATGCAGAGTTCGTT 59.677 50.000 19.59 0.00 45.94 3.85
902 930 0.322975 AAGCTGGATGCAGAGTTCGT 59.677 50.000 19.59 0.00 45.94 3.85
903 931 1.005340 GAAGCTGGATGCAGAGTTCG 58.995 55.000 19.59 0.00 45.94 3.95
904 932 1.005340 CGAAGCTGGATGCAGAGTTC 58.995 55.000 19.59 17.12 45.94 3.01
905 933 0.322975 ACGAAGCTGGATGCAGAGTT 59.677 50.000 19.59 10.14 45.94 3.01
906 934 0.108424 GACGAAGCTGGATGCAGAGT 60.108 55.000 19.59 11.18 45.94 3.24
907 935 0.809241 GGACGAAGCTGGATGCAGAG 60.809 60.000 19.59 8.03 45.94 3.35
908 936 1.219124 GGACGAAGCTGGATGCAGA 59.781 57.895 19.59 0.00 45.94 4.26
909 937 0.809241 GAGGACGAAGCTGGATGCAG 60.809 60.000 10.32 10.32 45.94 4.41
910 938 1.219124 GAGGACGAAGCTGGATGCA 59.781 57.895 0.00 0.00 45.94 3.96
911 939 0.391661 TTGAGGACGAAGCTGGATGC 60.392 55.000 0.00 0.00 43.29 3.91
912 940 1.338105 TGTTGAGGACGAAGCTGGATG 60.338 52.381 0.00 0.00 0.00 3.51
913 941 0.976641 TGTTGAGGACGAAGCTGGAT 59.023 50.000 0.00 0.00 0.00 3.41
914 942 0.033504 GTGTTGAGGACGAAGCTGGA 59.966 55.000 0.00 0.00 0.00 3.86
915 943 0.951040 GGTGTTGAGGACGAAGCTGG 60.951 60.000 0.00 0.00 0.00 4.85
916 944 0.034059 AGGTGTTGAGGACGAAGCTG 59.966 55.000 0.00 0.00 0.00 4.24
917 945 1.629043 TAGGTGTTGAGGACGAAGCT 58.371 50.000 0.00 0.00 0.00 3.74
918 946 2.271800 CATAGGTGTTGAGGACGAAGC 58.728 52.381 0.00 0.00 0.00 3.86
930 958 3.576356 GCATGCGCGCATAGGTGT 61.576 61.111 42.66 21.87 34.91 4.16
934 962 0.452287 GAATCAGCATGCGCGCATAG 60.452 55.000 42.66 34.01 45.49 2.23
1044 1072 2.297033 AGTTTCACGTACGGCCTCTTTA 59.703 45.455 21.06 0.00 0.00 1.85
1074 1102 7.120873 CAGGAATGGAAATGCAGATATAGAAGG 59.879 40.741 0.00 0.00 0.00 3.46
1092 1120 5.009631 TGATTCACAAGGTTACAGGAATGG 58.990 41.667 0.00 0.00 0.00 3.16
1101 1129 9.739276 AAGATATTCAACTGATTCACAAGGTTA 57.261 29.630 0.00 0.00 0.00 2.85
1110 1138 8.976986 AACAAAGCAAGATATTCAACTGATTC 57.023 30.769 0.00 0.00 0.00 2.52
1112 1140 9.768662 AAAAACAAAGCAAGATATTCAACTGAT 57.231 25.926 0.00 0.00 0.00 2.90
1113 1141 9.248291 GAAAAACAAAGCAAGATATTCAACTGA 57.752 29.630 0.00 0.00 0.00 3.41
1114 1142 9.252962 AGAAAAACAAAGCAAGATATTCAACTG 57.747 29.630 0.00 0.00 0.00 3.16
1115 1143 9.822185 AAGAAAAACAAAGCAAGATATTCAACT 57.178 25.926 0.00 0.00 0.00 3.16
1117 1145 9.260002 GGAAGAAAAACAAAGCAAGATATTCAA 57.740 29.630 0.00 0.00 0.00 2.69
1118 1146 8.420222 TGGAAGAAAAACAAAGCAAGATATTCA 58.580 29.630 0.00 0.00 0.00 2.57
1119 1147 8.816640 TGGAAGAAAAACAAAGCAAGATATTC 57.183 30.769 0.00 0.00 0.00 1.75
1120 1148 7.874528 CCTGGAAGAAAAACAAAGCAAGATATT 59.125 33.333 0.00 0.00 34.07 1.28
1121 1149 7.233348 TCCTGGAAGAAAAACAAAGCAAGATAT 59.767 33.333 0.00 0.00 34.07 1.63
1122 1150 6.549364 TCCTGGAAGAAAAACAAAGCAAGATA 59.451 34.615 0.00 0.00 34.07 1.98
1159 1187 1.487976 TGAACCTCTCCCTCATGATGC 59.512 52.381 0.00 0.00 0.00 3.91
1160 1188 2.104451 CCTGAACCTCTCCCTCATGATG 59.896 54.545 0.00 0.00 0.00 3.07
1161 1189 2.406559 CCTGAACCTCTCCCTCATGAT 58.593 52.381 0.00 0.00 0.00 2.45
1215 1243 1.373497 CTGAGACCTCACGTGGTGC 60.373 63.158 17.00 3.14 41.00 5.01
1229 1257 5.280215 GGGAGTGATAATATTGGGGTCTGAG 60.280 48.000 0.00 0.00 0.00 3.35
1280 1308 1.063811 GTAGTACTCGAGTGCGGCC 59.936 63.158 28.12 15.06 38.28 6.13
1361 1389 4.561213 CACATGATACATTTGCTGCAAGTG 59.439 41.667 28.97 28.97 37.16 3.16
1404 1432 7.048629 TCAGAAACAGGCATATTTTTGTCAA 57.951 32.000 0.00 0.00 0.00 3.18
1407 1435 6.041979 ACCTTCAGAAACAGGCATATTTTTGT 59.958 34.615 0.00 0.00 32.79 2.83
1408 1436 6.366877 CACCTTCAGAAACAGGCATATTTTTG 59.633 38.462 0.00 0.00 32.79 2.44
1409 1437 6.267471 TCACCTTCAGAAACAGGCATATTTTT 59.733 34.615 0.00 0.00 32.79 1.94
1417 1448 3.935828 GAGTATCACCTTCAGAAACAGGC 59.064 47.826 0.00 0.00 32.79 4.85
1513 1544 1.132588 GCGAGTGTTCGGATCATAGC 58.867 55.000 0.00 0.00 46.76 2.97
1569 1603 5.182760 GCATCAGAGACAATCAAGTTCCTTT 59.817 40.000 0.00 0.00 0.00 3.11
1572 1606 3.063180 CGCATCAGAGACAATCAAGTTCC 59.937 47.826 0.00 0.00 0.00 3.62
1588 1622 3.278574 CCATAAAGTTCCTTCCGCATCA 58.721 45.455 0.00 0.00 0.00 3.07
1590 1624 2.654863 CCCATAAAGTTCCTTCCGCAT 58.345 47.619 0.00 0.00 0.00 4.73
1591 1625 1.953311 GCCCATAAAGTTCCTTCCGCA 60.953 52.381 0.00 0.00 0.00 5.69
1592 1626 0.738975 GCCCATAAAGTTCCTTCCGC 59.261 55.000 0.00 0.00 0.00 5.54
1593 1627 2.017049 CAGCCCATAAAGTTCCTTCCG 58.983 52.381 0.00 0.00 0.00 4.30
1594 1628 2.291605 ACCAGCCCATAAAGTTCCTTCC 60.292 50.000 0.00 0.00 0.00 3.46
1595 1629 3.087370 ACCAGCCCATAAAGTTCCTTC 57.913 47.619 0.00 0.00 0.00 3.46
1599 1633 6.715347 AATTCATACCAGCCCATAAAGTTC 57.285 37.500 0.00 0.00 0.00 3.01
1600 1634 8.782137 ATAAATTCATACCAGCCCATAAAGTT 57.218 30.769 0.00 0.00 0.00 2.66
1693 1752 4.475944 CGCAAAATCGAGAAATGGACTTT 58.524 39.130 0.00 0.00 0.00 2.66
1738 1797 2.419297 GGTGCCTGGAGTTATCACTGAG 60.419 54.545 0.00 0.00 31.22 3.35
1744 1803 3.281727 TCATTGGTGCCTGGAGTTATC 57.718 47.619 0.00 0.00 0.00 1.75
1745 1804 3.737559 TTCATTGGTGCCTGGAGTTAT 57.262 42.857 0.00 0.00 0.00 1.89
1756 1815 7.661127 AATCATGTTCAACATTTCATTGGTG 57.339 32.000 0.00 0.00 36.53 4.17
1791 1850 4.849813 ATTCCATATGCTGCATAGGCTA 57.150 40.909 24.48 15.90 41.91 3.93
1835 1894 7.979444 AAATGCTAGCTTTACTTTGACAGTA 57.021 32.000 17.23 0.00 36.88 2.74
1870 1929 4.774726 ACAGAAGAGTATTCTCAGCTCCAA 59.225 41.667 0.00 0.00 42.66 3.53
1890 1949 5.997385 AGCACGTCCTGTTTAAATTTACAG 58.003 37.500 12.36 12.36 41.08 2.74
1947 2006 5.008613 GGCTGTGAAACTTTTATCAGTCACA 59.991 40.000 4.43 4.43 38.04 3.58
1955 2014 5.140454 ACTCTTGGGCTGTGAAACTTTTAT 58.860 37.500 0.00 0.00 38.04 1.40
1958 2017 3.018423 ACTCTTGGGCTGTGAAACTTT 57.982 42.857 0.00 0.00 38.04 2.66
1965 2024 2.270352 TTGGTAACTCTTGGGCTGTG 57.730 50.000 0.00 0.00 37.61 3.66
2117 2177 4.305769 GAACTGCAACAATGTAAATGGCA 58.694 39.130 0.00 0.00 0.00 4.92
2202 2262 3.550842 CGTCGATCAGCCTATCAATGTCA 60.551 47.826 0.00 0.00 0.00 3.58
2386 2449 3.049206 GAGAAGATCGACTGCATACTGC 58.951 50.000 0.00 0.00 45.29 4.40
2676 2739 3.877559 TGCATACTCTTGACAAGGATGG 58.122 45.455 15.13 6.19 0.00 3.51
2724 2794 6.204688 TCTGCAATTAACCAAGTAACAGACAG 59.795 38.462 0.00 0.00 0.00 3.51
2811 2881 9.760077 CGACTATAACTAATCCTTACCACAATT 57.240 33.333 0.00 0.00 0.00 2.32
2827 2897 6.868864 GCATGTACATTCCATCGACTATAACT 59.131 38.462 5.37 0.00 0.00 2.24
2832 2902 4.142049 TGTGCATGTACATTCCATCGACTA 60.142 41.667 13.02 0.00 0.00 2.59
2833 2903 3.198068 GTGCATGTACATTCCATCGACT 58.802 45.455 5.37 0.00 0.00 4.18
2841 2911 7.959689 ATTAGATCTCTGTGCATGTACATTC 57.040 36.000 17.33 11.47 0.00 2.67
2874 2945 0.034476 TGCACTCTCTTCCTGCACAG 59.966 55.000 0.00 0.00 36.00 3.66
2887 2958 2.771089 TGTTCAAGGACATCTGCACTC 58.229 47.619 0.00 0.00 0.00 3.51
2912 2983 4.931601 GTCATCAGTGCAAACAGAGATACA 59.068 41.667 0.00 0.00 0.00 2.29
2922 2993 1.610038 CAGGCTTGTCATCAGTGCAAA 59.390 47.619 0.00 0.00 0.00 3.68
3039 3121 6.466885 TCTAAGGTATTCTCAGTAACCTGC 57.533 41.667 0.00 0.00 41.51 4.85
3073 3155 6.019779 ACTACGCAGATTATCCTTCAGATC 57.980 41.667 0.00 0.00 36.33 2.75
3205 3288 2.225467 GGCAATCCCAGTCTTATCTGC 58.775 52.381 0.00 0.00 34.47 4.26
3320 3403 7.765695 ATGAGACTATTTGCAGGAAAAAGAA 57.234 32.000 0.00 0.00 0.00 2.52
3498 3583 9.410556 ACATAGACAAAAAGATACAATTTGCAC 57.589 29.630 0.00 0.00 37.52 4.57
3725 3815 6.365970 AAGATATCTTGAACTGTGACAGGT 57.634 37.500 17.26 10.97 33.45 4.00
3868 3958 0.032403 GGCACATGAGCTGCAACAAA 59.968 50.000 14.91 0.00 36.27 2.83
3869 3959 1.661480 GGCACATGAGCTGCAACAA 59.339 52.632 14.91 0.00 36.27 2.83
3870 3960 2.270257 GGGCACATGAGCTGCAACA 61.270 57.895 14.91 1.89 36.27 3.33
3871 3961 1.530013 AAGGGCACATGAGCTGCAAC 61.530 55.000 14.91 4.20 36.27 4.17
3916 4006 2.492088 TGTATCGTGGACTCTTCACAGG 59.508 50.000 0.00 0.00 35.03 4.00
3967 4059 9.427821 AAGAGTCTGATGATATTAACTACAGGT 57.572 33.333 0.00 0.00 0.00 4.00
3991 4093 4.142337 TGCATGCCACATCAATAGACAAAG 60.142 41.667 16.68 0.00 0.00 2.77
4000 4102 2.563620 AGTGAATTGCATGCCACATCAA 59.436 40.909 21.72 7.78 32.35 2.57
4047 4149 0.463116 ACAGGAAGCGTTTTCCGTGT 60.463 50.000 13.01 13.65 43.23 4.49
4050 4152 1.574428 CCACAGGAAGCGTTTTCCG 59.426 57.895 13.01 10.98 43.23 4.30
4079 4181 5.610398 TCATGTTAGTGCATATGAACGGAT 58.390 37.500 6.97 0.00 0.00 4.18
4081 4183 5.501715 GTTCATGTTAGTGCATATGAACGG 58.498 41.667 18.69 0.00 45.13 4.44
4089 4191 4.397420 TGAACCAGTTCATGTTAGTGCAT 58.603 39.130 9.12 0.00 43.90 3.96
4117 4219 2.162208 TGATCAGCTTGCGTTGGATTTC 59.838 45.455 0.00 0.00 0.00 2.17
4120 4222 1.741706 CTTGATCAGCTTGCGTTGGAT 59.258 47.619 0.00 0.00 0.00 3.41
4122 4224 0.877071 ACTTGATCAGCTTGCGTTGG 59.123 50.000 0.00 0.00 0.00 3.77
4131 4233 5.111989 TGCTATCACAACTACTTGATCAGC 58.888 41.667 0.00 0.00 34.28 4.26
4233 4344 5.788450 AGATCCTTCTCTACTGTTTGTGTG 58.212 41.667 0.00 0.00 0.00 3.82
4236 4347 4.381079 GCGAGATCCTTCTCTACTGTTTGT 60.381 45.833 1.90 0.00 45.30 2.83
4237 4348 4.109050 GCGAGATCCTTCTCTACTGTTTG 58.891 47.826 1.90 0.00 45.30 2.93
4251 4362 5.378292 TGAGAATACATACTGCGAGATCC 57.622 43.478 0.00 0.00 0.00 3.36
4278 4389 5.229887 CGATTTATGCAATGCTGGTTTGTAC 59.770 40.000 6.82 0.00 0.00 2.90
4279 4390 5.339177 CGATTTATGCAATGCTGGTTTGTA 58.661 37.500 6.82 0.00 0.00 2.41
4280 4391 4.175516 CGATTTATGCAATGCTGGTTTGT 58.824 39.130 6.82 0.00 0.00 2.83
4281 4392 3.000523 GCGATTTATGCAATGCTGGTTTG 59.999 43.478 6.82 0.00 0.00 2.93
4293 4407 4.722194 TCTTTGTGACTTGCGATTTATGC 58.278 39.130 0.00 0.00 0.00 3.14
4302 4416 6.690194 AGAATCCATATCTTTGTGACTTGC 57.310 37.500 0.00 0.00 0.00 4.01
4303 4417 8.616076 GGTAAGAATCCATATCTTTGTGACTTG 58.384 37.037 0.00 0.00 38.13 3.16
4313 4427 7.067494 GTGCAAACAAGGTAAGAATCCATATCT 59.933 37.037 0.00 0.00 0.00 1.98
4314 4428 7.148086 TGTGCAAACAAGGTAAGAATCCATATC 60.148 37.037 0.00 0.00 0.00 1.63
4321 4435 5.536161 ACTGATGTGCAAACAAGGTAAGAAT 59.464 36.000 0.00 0.00 0.00 2.40
4353 4467 2.128035 CGGATAGTGTTCCTTCGCATC 58.872 52.381 0.00 0.00 33.30 3.91
4357 4471 0.174845 TGCCGGATAGTGTTCCTTCG 59.825 55.000 5.05 0.00 33.30 3.79
4359 4473 1.906574 TCTTGCCGGATAGTGTTCCTT 59.093 47.619 5.05 0.00 33.30 3.36
4392 4506 0.605589 CCAGAGAGCTTGAGTTCCGT 59.394 55.000 0.00 0.00 0.00 4.69
4393 4507 0.739112 GCCAGAGAGCTTGAGTTCCG 60.739 60.000 0.00 0.00 0.00 4.30
4512 4626 6.925165 TGAAATTTGGAGCAGAACAGAAAATC 59.075 34.615 0.00 0.00 0.00 2.17
4557 4671 4.243793 TGGAAAAGTGAAGGAAAGTCCA 57.756 40.909 0.00 0.00 39.61 4.02
4585 4699 5.297776 GGATAACCATCCTGTGATTTCACTG 59.702 44.000 11.67 10.69 46.47 3.66
4710 4824 6.194463 CCAATGCATGAACATAGTAGTTTCG 58.806 40.000 0.00 0.00 0.00 3.46
4713 4827 4.889409 CCCCAATGCATGAACATAGTAGTT 59.111 41.667 0.00 0.00 0.00 2.24
4814 4930 3.065925 GCAGTCTTGATATTGGCTTCACC 59.934 47.826 0.00 0.00 39.84 4.02
4826 4942 3.257393 GACATTGTCGAGCAGTCTTGAT 58.743 45.455 0.13 0.00 35.31 2.57
4853 4969 0.106217 ACCAACCAACCTTGTCAGGG 60.106 55.000 0.00 0.00 46.01 4.45
4865 4981 4.280425 TGTAGTACAACGTCATACCAACCA 59.720 41.667 0.00 0.00 0.00 3.67
4941 5060 4.377431 CCGAATGTCACTTTCAGTAACAGC 60.377 45.833 4.44 0.00 28.31 4.40
5003 5122 3.991051 CTGCAGGTGACCGTCGGT 61.991 66.667 18.94 18.94 39.44 4.69
5093 5212 2.854032 CTACCCCGCCCCATCCAT 60.854 66.667 0.00 0.00 0.00 3.41
5151 5270 2.960688 GCCAGAAGCCGTTCCTCCT 61.961 63.158 0.00 0.00 32.48 3.69
5199 5345 0.036294 CCTTGGAAACCTCTCCCGTC 60.036 60.000 0.00 0.00 34.22 4.79
5436 5582 9.938280 TGTTTCATGCAAAATACTAGTACTACT 57.062 29.630 4.31 0.00 0.00 2.57
5439 5585 9.448438 TCATGTTTCATGCAAAATACTAGTACT 57.552 29.630 4.31 0.00 0.00 2.73
5440 5586 9.708222 CTCATGTTTCATGCAAAATACTAGTAC 57.292 33.333 4.31 0.00 0.00 2.73
5442 5588 7.253422 GCTCATGTTTCATGCAAAATACTAGT 58.747 34.615 0.00 0.00 0.00 2.57
5444 5590 6.128035 ACGCTCATGTTTCATGCAAAATACTA 60.128 34.615 0.00 0.00 0.00 1.82
5477 5623 3.190118 CAGTTCATCAAACTCCCAAGCTC 59.810 47.826 0.00 0.00 45.28 4.09
5478 5624 3.152341 CAGTTCATCAAACTCCCAAGCT 58.848 45.455 0.00 0.00 45.28 3.74
5479 5625 2.229784 CCAGTTCATCAAACTCCCAAGC 59.770 50.000 0.00 0.00 45.28 4.01
5480 5626 3.254166 CACCAGTTCATCAAACTCCCAAG 59.746 47.826 0.00 0.00 45.28 3.61
5481 5627 3.221771 CACCAGTTCATCAAACTCCCAA 58.778 45.455 0.00 0.00 45.28 4.12
5482 5628 2.862541 CACCAGTTCATCAAACTCCCA 58.137 47.619 0.00 0.00 45.28 4.37
5483 5629 1.541588 GCACCAGTTCATCAAACTCCC 59.458 52.381 0.00 0.00 45.28 4.30
5484 5630 2.229792 TGCACCAGTTCATCAAACTCC 58.770 47.619 0.00 0.00 45.28 3.85
5500 5646 1.933052 GCCCGGTAACACAAAATGCAC 60.933 52.381 0.00 0.00 0.00 4.57
5604 5779 6.426937 ACGAGCAACATAAAATACACAGAGTT 59.573 34.615 0.00 0.00 0.00 3.01
5644 5823 4.718940 AGAACCCAAATTCGCCATAAAG 57.281 40.909 0.00 0.00 33.57 1.85
5654 5833 4.356289 CGACGAACAAAAGAACCCAAATT 58.644 39.130 0.00 0.00 0.00 1.82
5655 5834 3.794138 GCGACGAACAAAAGAACCCAAAT 60.794 43.478 0.00 0.00 0.00 2.32
5656 5835 2.478200 GCGACGAACAAAAGAACCCAAA 60.478 45.455 0.00 0.00 0.00 3.28
5657 5836 1.064357 GCGACGAACAAAAGAACCCAA 59.936 47.619 0.00 0.00 0.00 4.12
5658 5837 0.658897 GCGACGAACAAAAGAACCCA 59.341 50.000 0.00 0.00 0.00 4.51
5659 5838 0.942252 AGCGACGAACAAAAGAACCC 59.058 50.000 0.00 0.00 0.00 4.11
5660 5839 1.920272 GCAGCGACGAACAAAAGAACC 60.920 52.381 0.00 0.00 0.00 3.62
5661 5840 1.385999 GCAGCGACGAACAAAAGAAC 58.614 50.000 0.00 0.00 0.00 3.01
5662 5841 0.042535 CGCAGCGACGAACAAAAGAA 60.043 50.000 9.98 0.00 34.06 2.52
5663 5842 1.562691 CGCAGCGACGAACAAAAGA 59.437 52.632 9.98 0.00 34.06 2.52
5664 5843 4.099924 CGCAGCGACGAACAAAAG 57.900 55.556 9.98 0.00 34.06 2.27
5677 5856 4.792106 GCCAAACATTAGGCGCAG 57.208 55.556 10.83 0.00 41.70 5.18
5686 5865 4.152759 CGAGAAATTTGCAATGCCAAACAT 59.847 37.500 1.53 0.00 42.30 2.71
5687 5866 3.493877 CGAGAAATTTGCAATGCCAAACA 59.506 39.130 1.53 0.00 37.51 2.83
5688 5867 3.665060 GCGAGAAATTTGCAATGCCAAAC 60.665 43.478 1.53 0.00 37.51 2.93
5689 5868 2.479656 GCGAGAAATTTGCAATGCCAAA 59.520 40.909 1.53 4.07 38.87 3.28
5690 5869 2.067766 GCGAGAAATTTGCAATGCCAA 58.932 42.857 1.53 0.00 36.12 4.52
5691 5870 1.672441 GGCGAGAAATTTGCAATGCCA 60.672 47.619 1.53 0.00 40.88 4.92
5692 5871 1.001624 GGCGAGAAATTTGCAATGCC 58.998 50.000 1.53 1.99 37.99 4.40
5693 5872 1.001624 GGGCGAGAAATTTGCAATGC 58.998 50.000 0.00 0.00 37.99 3.56
5694 5873 2.660189 AGGGCGAGAAATTTGCAATG 57.340 45.000 0.00 0.00 37.99 2.82
5695 5874 2.299867 ACAAGGGCGAGAAATTTGCAAT 59.700 40.909 0.00 0.00 37.99 3.56
5696 5875 1.686052 ACAAGGGCGAGAAATTTGCAA 59.314 42.857 0.00 0.00 37.99 4.08
5697 5876 1.327303 ACAAGGGCGAGAAATTTGCA 58.673 45.000 0.00 0.00 37.99 4.08
5698 5877 2.438868 AACAAGGGCGAGAAATTTGC 57.561 45.000 0.00 0.00 35.26 3.68
5699 5878 3.716601 ACAAACAAGGGCGAGAAATTTG 58.283 40.909 0.00 0.00 0.00 2.32
5700 5879 3.636764 AGACAAACAAGGGCGAGAAATTT 59.363 39.130 0.00 0.00 0.00 1.82
5701 5880 3.222603 AGACAAACAAGGGCGAGAAATT 58.777 40.909 0.00 0.00 0.00 1.82
5702 5881 2.863809 AGACAAACAAGGGCGAGAAAT 58.136 42.857 0.00 0.00 0.00 2.17
5703 5882 2.341846 AGACAAACAAGGGCGAGAAA 57.658 45.000 0.00 0.00 0.00 2.52
5704 5883 1.946768 CAAGACAAACAAGGGCGAGAA 59.053 47.619 0.00 0.00 0.00 2.87
5705 5884 1.593196 CAAGACAAACAAGGGCGAGA 58.407 50.000 0.00 0.00 0.00 4.04
5706 5885 0.040067 GCAAGACAAACAAGGGCGAG 60.040 55.000 0.00 0.00 0.00 5.03
5707 5886 0.465460 AGCAAGACAAACAAGGGCGA 60.465 50.000 0.00 0.00 0.00 5.54
5708 5887 1.234821 TAGCAAGACAAACAAGGGCG 58.765 50.000 0.00 0.00 0.00 6.13
5709 5888 3.005791 ACATTAGCAAGACAAACAAGGGC 59.994 43.478 0.00 0.00 0.00 5.19
5710 5889 4.853924 ACATTAGCAAGACAAACAAGGG 57.146 40.909 0.00 0.00 0.00 3.95
5711 5890 5.463061 CCAAACATTAGCAAGACAAACAAGG 59.537 40.000 0.00 0.00 0.00 3.61
5712 5891 5.050837 GCCAAACATTAGCAAGACAAACAAG 60.051 40.000 0.00 0.00 0.00 3.16
5713 5892 4.808364 GCCAAACATTAGCAAGACAAACAA 59.192 37.500 0.00 0.00 0.00 2.83
5714 5893 4.142071 TGCCAAACATTAGCAAGACAAACA 60.142 37.500 0.00 0.00 32.56 2.83
5715 5894 4.367450 TGCCAAACATTAGCAAGACAAAC 58.633 39.130 0.00 0.00 32.56 2.93
5716 5895 4.662468 TGCCAAACATTAGCAAGACAAA 57.338 36.364 0.00 0.00 32.56 2.83
5717 5896 4.870123 ATGCCAAACATTAGCAAGACAA 57.130 36.364 0.00 0.00 40.46 3.18
5728 5907 4.152759 CGAGAAATTTGCAATGCCAAACAT 59.847 37.500 1.53 0.00 42.30 2.71
5729 5908 3.493877 CGAGAAATTTGCAATGCCAAACA 59.506 39.130 1.53 0.00 37.51 2.83
5730 5909 3.665060 GCGAGAAATTTGCAATGCCAAAC 60.665 43.478 1.53 0.00 37.51 2.93
5731 5910 2.479656 GCGAGAAATTTGCAATGCCAAA 59.520 40.909 1.53 4.07 38.87 3.28
5732 5911 2.067766 GCGAGAAATTTGCAATGCCAA 58.932 42.857 1.53 0.00 36.12 4.52
5733 5912 1.672441 GGCGAGAAATTTGCAATGCCA 60.672 47.619 1.53 0.00 40.88 4.92
5734 5913 1.001624 GGCGAGAAATTTGCAATGCC 58.998 50.000 1.53 1.99 37.99 4.40
5735 5914 1.001624 GGGCGAGAAATTTGCAATGC 58.998 50.000 0.00 0.00 37.99 3.56
5789 5968 1.544246 AGAAAACCGCCTTACAATGCC 59.456 47.619 0.00 0.00 0.00 4.40
5795 5974 6.315393 TCATTAGATGAAGAAAACCGCCTTAC 59.685 38.462 0.00 0.00 36.11 2.34
5798 5977 4.843728 TCATTAGATGAAGAAAACCGCCT 58.156 39.130 0.00 0.00 36.11 5.52
5858 6037 4.742659 GCGTGGTAAAAGCAATCTCAAAAA 59.257 37.500 0.00 0.00 32.90 1.94
5859 6038 4.037446 AGCGTGGTAAAAGCAATCTCAAAA 59.963 37.500 0.00 0.00 35.46 2.44
5860 6039 3.568007 AGCGTGGTAAAAGCAATCTCAAA 59.432 39.130 0.00 0.00 35.46 2.69
5861 6040 3.146066 AGCGTGGTAAAAGCAATCTCAA 58.854 40.909 0.00 0.00 35.46 3.02
5862 6041 2.778299 AGCGTGGTAAAAGCAATCTCA 58.222 42.857 0.00 0.00 35.46 3.27
5863 6042 3.831715 AAGCGTGGTAAAAGCAATCTC 57.168 42.857 0.00 0.00 35.46 2.75
5864 6043 3.439129 GGTAAGCGTGGTAAAAGCAATCT 59.561 43.478 0.00 0.00 35.46 2.40
5865 6044 3.189702 TGGTAAGCGTGGTAAAAGCAATC 59.810 43.478 0.00 0.00 35.46 2.67
5866 6045 3.150767 TGGTAAGCGTGGTAAAAGCAAT 58.849 40.909 0.00 0.00 35.46 3.56
5867 6046 2.573369 TGGTAAGCGTGGTAAAAGCAA 58.427 42.857 0.00 0.00 35.46 3.91
5868 6047 2.257691 TGGTAAGCGTGGTAAAAGCA 57.742 45.000 0.00 0.00 35.46 3.91
5869 6048 2.551032 ACTTGGTAAGCGTGGTAAAAGC 59.449 45.455 0.00 0.00 0.00 3.51
5870 6049 3.058501 CCACTTGGTAAGCGTGGTAAAAG 60.059 47.826 0.00 0.00 42.45 2.27
5871 6050 2.879646 CCACTTGGTAAGCGTGGTAAAA 59.120 45.455 0.00 0.00 42.45 1.52
5872 6051 2.496111 CCACTTGGTAAGCGTGGTAAA 58.504 47.619 0.00 0.00 42.45 2.01
5873 6052 2.172851 CCACTTGGTAAGCGTGGTAA 57.827 50.000 0.00 0.00 42.45 2.85
5874 6053 3.919163 CCACTTGGTAAGCGTGGTA 57.081 52.632 0.00 0.00 42.45 3.25
5875 6054 4.792087 CCACTTGGTAAGCGTGGT 57.208 55.556 0.00 0.00 42.45 4.16
5883 6062 8.652081 ACATGTATGTGAGCAACCACTTGGTA 62.652 42.308 0.07 0.00 43.35 3.25
5884 6063 7.959899 ACATGTATGTGAGCAACCACTTGGT 62.960 44.000 0.00 0.00 44.98 3.67
5885 6064 2.503331 TGTATGTGAGCAACCACTTGG 58.497 47.619 0.00 0.00 37.89 3.61
5886 6065 3.503363 ACATGTATGTGAGCAACCACTTG 59.497 43.478 0.00 5.93 40.03 3.16
5887 6066 3.754965 ACATGTATGTGAGCAACCACTT 58.245 40.909 0.00 0.00 40.03 3.16
5888 6067 3.423539 ACATGTATGTGAGCAACCACT 57.576 42.857 0.00 0.00 40.03 4.00
5889 6068 5.572211 CATAACATGTATGTGAGCAACCAC 58.428 41.667 0.00 0.00 41.61 4.16
5890 6069 4.096231 GCATAACATGTATGTGAGCAACCA 59.904 41.667 0.00 0.00 41.61 3.67
5891 6070 4.336433 AGCATAACATGTATGTGAGCAACC 59.664 41.667 0.00 0.00 41.61 3.77
5892 6071 5.490139 AGCATAACATGTATGTGAGCAAC 57.510 39.130 0.00 0.00 41.61 4.17
5893 6072 5.676837 GCAAGCATAACATGTATGTGAGCAA 60.677 40.000 0.00 0.00 41.61 3.91
5894 6073 4.201940 GCAAGCATAACATGTATGTGAGCA 60.202 41.667 0.00 0.00 41.61 4.26
5895 6074 4.201940 TGCAAGCATAACATGTATGTGAGC 60.202 41.667 0.00 9.08 41.61 4.26
5896 6075 5.488645 TGCAAGCATAACATGTATGTGAG 57.511 39.130 0.00 0.18 41.61 3.51
5897 6076 6.767423 AGTATGCAAGCATAACATGTATGTGA 59.233 34.615 15.66 0.00 40.15 3.58
5898 6077 6.962686 AGTATGCAAGCATAACATGTATGTG 58.037 36.000 15.66 0.00 40.15 3.21
5899 6078 6.994496 AGAGTATGCAAGCATAACATGTATGT 59.006 34.615 15.66 0.00 40.15 2.29
5900 6079 7.430992 AGAGTATGCAAGCATAACATGTATG 57.569 36.000 15.66 4.94 40.15 2.39
5901 6080 9.730705 AATAGAGTATGCAAGCATAACATGTAT 57.269 29.630 15.66 10.31 40.15 2.29
5902 6081 9.559732 AAATAGAGTATGCAAGCATAACATGTA 57.440 29.630 15.66 8.75 40.15 2.29
5903 6082 8.455903 AAATAGAGTATGCAAGCATAACATGT 57.544 30.769 15.66 0.00 40.15 3.21
5904 6083 8.781196 AGAAATAGAGTATGCAAGCATAACATG 58.219 33.333 15.66 0.00 40.15 3.21
5905 6084 8.781196 CAGAAATAGAGTATGCAAGCATAACAT 58.219 33.333 15.66 5.97 40.15 2.71
5906 6085 7.770433 ACAGAAATAGAGTATGCAAGCATAACA 59.230 33.333 15.66 3.17 40.15 2.41
5907 6086 8.066595 CACAGAAATAGAGTATGCAAGCATAAC 58.933 37.037 15.66 12.61 40.15 1.89
5908 6087 7.986889 TCACAGAAATAGAGTATGCAAGCATAA 59.013 33.333 15.66 1.84 40.15 1.90
5909 6088 7.500141 TCACAGAAATAGAGTATGCAAGCATA 58.500 34.615 10.52 10.52 37.82 3.14
5914 6093 5.063438 GCGTTCACAGAAATAGAGTATGCAA 59.937 40.000 0.00 0.00 0.00 4.08
5962 6141 2.214181 CTTGTCCGTCTGGTCTCGGG 62.214 65.000 3.85 0.00 45.79 5.14
5963 6142 1.213013 CTTGTCCGTCTGGTCTCGG 59.787 63.158 0.00 0.00 46.93 4.63
5964 6143 1.444553 GCTTGTCCGTCTGGTCTCG 60.445 63.158 0.00 0.00 36.30 4.04
5965 6144 0.667792 GTGCTTGTCCGTCTGGTCTC 60.668 60.000 0.00 0.00 36.30 3.36
5966 6145 1.367840 GTGCTTGTCCGTCTGGTCT 59.632 57.895 0.00 0.00 36.30 3.85
5967 6146 1.668151 GGTGCTTGTCCGTCTGGTC 60.668 63.158 0.00 0.00 36.30 4.02
5969 6148 1.961277 GTGGTGCTTGTCCGTCTGG 60.961 63.158 0.00 0.00 0.00 3.86
5970 6149 0.532862 AAGTGGTGCTTGTCCGTCTG 60.533 55.000 0.00 0.00 35.80 3.51
5971 6150 1.830145 AAGTGGTGCTTGTCCGTCT 59.170 52.632 0.00 0.00 35.80 4.18
5972 6151 4.456806 AAGTGGTGCTTGTCCGTC 57.543 55.556 0.00 0.00 35.80 4.79
5986 6165 5.775195 GGCCTCCTATAAAAATATGCCAAGT 59.225 40.000 0.00 0.00 36.40 3.16
5989 6168 4.042311 TCGGCCTCCTATAAAAATATGCCA 59.958 41.667 0.00 0.00 36.15 4.92
6005 6184 1.335051 GCAAAACTGTTTCTCGGCCTC 60.335 52.381 6.20 0.00 0.00 4.70
6009 6188 3.904136 ATCTGCAAAACTGTTTCTCGG 57.096 42.857 6.20 6.71 0.00 4.63
6044 6223 4.883021 AGTAGGAGGAGAGGTTCATGTA 57.117 45.455 0.00 0.00 0.00 2.29
6046 6225 6.325028 TCATTTAGTAGGAGGAGAGGTTCATG 59.675 42.308 0.00 0.00 0.00 3.07
6047 6226 6.444704 TCATTTAGTAGGAGGAGAGGTTCAT 58.555 40.000 0.00 0.00 0.00 2.57
6049 6228 6.154706 TGTTCATTTAGTAGGAGGAGAGGTTC 59.845 42.308 0.00 0.00 0.00 3.62
6050 6229 6.023603 TGTTCATTTAGTAGGAGGAGAGGTT 58.976 40.000 0.00 0.00 0.00 3.50
6052 6231 6.739331 ATGTTCATTTAGTAGGAGGAGAGG 57.261 41.667 0.00 0.00 0.00 3.69
6053 6232 7.560368 ACAATGTTCATTTAGTAGGAGGAGAG 58.440 38.462 0.00 0.00 0.00 3.20
6055 6234 6.477033 CGACAATGTTCATTTAGTAGGAGGAG 59.523 42.308 0.00 0.00 0.00 3.69
6056 6235 6.338146 CGACAATGTTCATTTAGTAGGAGGA 58.662 40.000 0.00 0.00 0.00 3.71
6057 6236 5.523916 CCGACAATGTTCATTTAGTAGGAGG 59.476 44.000 8.39 0.68 0.00 4.30
6059 6238 6.288941 TCCGACAATGTTCATTTAGTAGGA 57.711 37.500 11.01 11.01 0.00 2.94
6060 6239 6.978343 TTCCGACAATGTTCATTTAGTAGG 57.022 37.500 0.00 8.01 0.00 3.18
6098 6315 5.319931 GCGAATTGAGCATAGCTTATTAGC 58.680 41.667 0.00 12.87 39.88 3.09
6101 6318 4.392940 AGGCGAATTGAGCATAGCTTATT 58.607 39.130 0.00 0.00 39.88 1.40
6104 6321 2.338577 AGGCGAATTGAGCATAGCTT 57.661 45.000 0.00 0.00 39.88 3.74
6116 6333 7.542534 TTTAAACAACATCGTATAGGCGAAT 57.457 32.000 0.00 0.00 44.38 3.34
6146 6363 2.857748 GCAGTGTTGGTGTTTACAAAGC 59.142 45.455 0.00 0.00 0.00 3.51
6158 6387 0.320374 TCTCGGTTAGGCAGTGTTGG 59.680 55.000 0.00 0.00 0.00 3.77
6182 6411 8.049117 TGGTTGCTACTTTCTAAGATGATGAAT 58.951 33.333 0.00 0.00 0.00 2.57
6184 6413 6.946340 TGGTTGCTACTTTCTAAGATGATGA 58.054 36.000 0.00 0.00 0.00 2.92
6185 6414 6.820656 ACTGGTTGCTACTTTCTAAGATGATG 59.179 38.462 0.00 0.00 0.00 3.07
6186 6415 6.951971 ACTGGTTGCTACTTTCTAAGATGAT 58.048 36.000 0.00 0.00 0.00 2.45
6224 6456 3.155998 GCAAGACGATTTGTGAATGTCG 58.844 45.455 0.00 0.00 39.78 4.35
6234 6466 5.571784 AATGATGATGTGCAAGACGATTT 57.428 34.783 0.00 0.00 0.00 2.17
6288 6520 7.930513 TGTCTTCTTATGTGACTATTATGCG 57.069 36.000 0.00 0.00 0.00 4.73
6360 6592 4.922206 TCCTCTCATGCCATGTTAGTTTT 58.078 39.130 4.31 0.00 0.00 2.43


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.