Multiple sequence alignment - TraesCS4D01G112700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G112700 chr4D 100.000 3297 0 0 1 3297 93441243 93444539 0.000000e+00 6089
1 TraesCS4D01G112700 chr5D 98.651 2669 35 1 630 3297 447318083 447315415 0.000000e+00 4728
2 TraesCS4D01G112700 chr5D 97.052 441 12 1 1 440 84380143 84379703 0.000000e+00 741
3 TraesCS4D01G112700 chr5D 95.928 442 13 4 1 440 423275004 423275442 0.000000e+00 712
4 TraesCS4D01G112700 chr6B 87.638 1181 137 5 2103 3282 36240685 36241857 0.000000e+00 1363
5 TraesCS4D01G112700 chr6B 81.909 1100 185 14 2178 3272 558828895 558829985 0.000000e+00 917
6 TraesCS4D01G112700 chr2B 86.967 1197 144 9 2103 3297 358777968 358776782 0.000000e+00 1336
7 TraesCS4D01G112700 chr2A 86.243 1134 147 8 2141 3270 711537872 711536744 0.000000e+00 1221
8 TraesCS4D01G112700 chr7B 83.081 1058 168 11 2182 3235 11289475 11288425 0.000000e+00 952
9 TraesCS4D01G112700 chr3B 81.908 1111 177 22 2184 3280 452472019 452470919 0.000000e+00 917
10 TraesCS4D01G112700 chr3B 77.258 598 133 3 2634 3229 761922876 761922280 6.770000e-92 348
11 TraesCS4D01G112700 chr1B 84.017 926 116 15 2135 3057 60483953 60484849 0.000000e+00 861
12 TraesCS4D01G112700 chr1B 79.580 857 146 25 630 1466 60482507 60483354 1.320000e-163 586
13 TraesCS4D01G112700 chr4B 83.135 925 126 14 2135 3057 139527583 139526687 0.000000e+00 817
14 TraesCS4D01G112700 chr4B 93.452 168 11 0 464 631 131706609 131706776 1.960000e-62 250
15 TraesCS4D01G112700 chr7A 80.037 1087 186 23 2184 3250 644610301 644611376 0.000000e+00 776
16 TraesCS4D01G112700 chr3D 97.968 443 6 2 1 440 80218273 80217831 0.000000e+00 765
17 TraesCS4D01G112700 chr2D 96.599 441 14 1 1 440 30080930 30080490 0.000000e+00 730
18 TraesCS4D01G112700 chrUn 96.804 438 11 2 1 435 370576338 370576775 0.000000e+00 728
19 TraesCS4D01G112700 chrUn 96.145 441 14 2 1 438 332492255 332491815 0.000000e+00 717
20 TraesCS4D01G112700 chrUn 96.145 441 14 2 1 438 396909993 396909553 0.000000e+00 717
21 TraesCS4D01G112700 chr7D 96.101 436 16 1 6 440 500233650 500234085 0.000000e+00 710
22 TraesCS4D01G112700 chr6D 95.692 441 14 3 1 440 324750023 324749587 0.000000e+00 704
23 TraesCS4D01G112700 chr6D 82.424 330 43 10 1872 2188 414759415 414759088 1.170000e-69 274
24 TraesCS4D01G112700 chr4A 81.645 839 133 17 2393 3223 661187576 661188401 0.000000e+00 676
25 TraesCS4D01G112700 chr4A 77.258 598 132 4 2634 3229 661032590 661031995 6.770000e-92 348
26 TraesCS4D01G112700 chr4A 92.727 165 12 0 467 631 488535265 488535101 4.250000e-59 239
27 TraesCS4D01G112700 chr5A 83.197 244 32 4 1939 2173 474518017 474518260 7.170000e-52 215


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G112700 chr4D 93441243 93444539 3296 False 6089.0 6089 100.0000 1 3297 1 chr4D.!!$F1 3296
1 TraesCS4D01G112700 chr5D 447315415 447318083 2668 True 4728.0 4728 98.6510 630 3297 1 chr5D.!!$R2 2667
2 TraesCS4D01G112700 chr6B 36240685 36241857 1172 False 1363.0 1363 87.6380 2103 3282 1 chr6B.!!$F1 1179
3 TraesCS4D01G112700 chr6B 558828895 558829985 1090 False 917.0 917 81.9090 2178 3272 1 chr6B.!!$F2 1094
4 TraesCS4D01G112700 chr2B 358776782 358777968 1186 True 1336.0 1336 86.9670 2103 3297 1 chr2B.!!$R1 1194
5 TraesCS4D01G112700 chr2A 711536744 711537872 1128 True 1221.0 1221 86.2430 2141 3270 1 chr2A.!!$R1 1129
6 TraesCS4D01G112700 chr7B 11288425 11289475 1050 True 952.0 952 83.0810 2182 3235 1 chr7B.!!$R1 1053
7 TraesCS4D01G112700 chr3B 452470919 452472019 1100 True 917.0 917 81.9080 2184 3280 1 chr3B.!!$R1 1096
8 TraesCS4D01G112700 chr3B 761922280 761922876 596 True 348.0 348 77.2580 2634 3229 1 chr3B.!!$R2 595
9 TraesCS4D01G112700 chr1B 60482507 60484849 2342 False 723.5 861 81.7985 630 3057 2 chr1B.!!$F1 2427
10 TraesCS4D01G112700 chr4B 139526687 139527583 896 True 817.0 817 83.1350 2135 3057 1 chr4B.!!$R1 922
11 TraesCS4D01G112700 chr7A 644610301 644611376 1075 False 776.0 776 80.0370 2184 3250 1 chr7A.!!$F1 1066
12 TraesCS4D01G112700 chr4A 661187576 661188401 825 False 676.0 676 81.6450 2393 3223 1 chr4A.!!$F1 830
13 TraesCS4D01G112700 chr4A 661031995 661032590 595 True 348.0 348 77.2580 2634 3229 1 chr4A.!!$R2 595

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
499 500 0.027455 CGTTTCGCAGCAGTTTCACA 59.973 50.0 0.0 0.00 0.00 3.58 F
562 563 0.033920 GCCTTTCAAACAGGGGCTTG 59.966 55.0 0.0 0.00 39.68 4.01 F
598 599 0.110486 GTTGGCAGGAGGTCCTTCAA 59.890 55.0 0.0 1.93 46.09 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1871 1916 1.669265 GCACGGATTAGCACCCTAAAC 59.331 52.381 0.0 0.0 37.12 2.01 R
2275 2336 4.571369 TTACAATGTTCCCGGGTTGATA 57.429 40.909 24.2 12.1 0.00 2.15 R
2630 2699 5.920193 ATGTACCAATCATTGTCCTTTGG 57.080 39.130 0.0 0.0 43.41 3.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.045926 GCCAACACCATCGGAGCT 60.046 61.111 0.00 0.00 0.00 4.09
18 19 1.675641 GCCAACACCATCGGAGCTT 60.676 57.895 0.00 0.00 0.00 3.74
19 20 1.648467 GCCAACACCATCGGAGCTTC 61.648 60.000 0.00 0.00 0.00 3.86
20 21 0.321564 CCAACACCATCGGAGCTTCA 60.322 55.000 0.00 0.00 0.00 3.02
21 22 0.798776 CAACACCATCGGAGCTTCAC 59.201 55.000 0.00 0.00 0.00 3.18
22 23 0.670546 AACACCATCGGAGCTTCACG 60.671 55.000 0.00 0.00 0.00 4.35
23 24 1.079819 CACCATCGGAGCTTCACGT 60.080 57.895 0.00 0.00 0.00 4.49
24 25 1.079819 ACCATCGGAGCTTCACGTG 60.080 57.895 9.94 9.94 0.00 4.49
25 26 1.215382 CCATCGGAGCTTCACGTGA 59.785 57.895 15.76 15.76 0.00 4.35
26 27 0.179100 CCATCGGAGCTTCACGTGAT 60.179 55.000 20.80 4.07 0.00 3.06
27 28 0.926155 CATCGGAGCTTCACGTGATG 59.074 55.000 20.80 22.21 0.00 3.07
28 29 0.807667 ATCGGAGCTTCACGTGATGC 60.808 55.000 36.17 36.17 43.17 3.91
29 30 2.792290 CGGAGCTTCACGTGATGCG 61.792 63.158 36.08 26.88 46.13 4.73
30 31 2.456119 GGAGCTTCACGTGATGCGG 61.456 63.158 36.08 21.17 46.13 5.69
31 32 1.738099 GAGCTTCACGTGATGCGGT 60.738 57.895 36.08 26.37 46.13 5.68
32 33 1.959899 GAGCTTCACGTGATGCGGTG 61.960 60.000 36.08 17.89 46.13 4.94
33 34 2.476051 CTTCACGTGATGCGGTGC 59.524 61.111 20.80 0.00 46.52 5.01
34 35 3.353114 CTTCACGTGATGCGGTGCG 62.353 63.158 20.80 0.00 46.52 5.34
45 46 4.193334 CGGTGCGCGATGAGGAGA 62.193 66.667 12.10 0.00 0.00 3.71
46 47 2.279120 GGTGCGCGATGAGGAGAG 60.279 66.667 12.10 0.00 0.00 3.20
47 48 2.279120 GTGCGCGATGAGGAGAGG 60.279 66.667 12.10 0.00 0.00 3.69
48 49 3.531207 TGCGCGATGAGGAGAGGG 61.531 66.667 12.10 0.00 0.00 4.30
49 50 3.219928 GCGCGATGAGGAGAGGGA 61.220 66.667 12.10 0.00 0.00 4.20
50 51 3.038280 CGCGATGAGGAGAGGGAG 58.962 66.667 0.00 0.00 0.00 4.30
51 52 2.560119 CGCGATGAGGAGAGGGAGG 61.560 68.421 0.00 0.00 0.00 4.30
52 53 1.152652 GCGATGAGGAGAGGGAGGA 60.153 63.158 0.00 0.00 0.00 3.71
53 54 0.757188 GCGATGAGGAGAGGGAGGAA 60.757 60.000 0.00 0.00 0.00 3.36
54 55 1.327303 CGATGAGGAGAGGGAGGAAG 58.673 60.000 0.00 0.00 0.00 3.46
55 56 1.133637 CGATGAGGAGAGGGAGGAAGA 60.134 57.143 0.00 0.00 0.00 2.87
56 57 2.490718 CGATGAGGAGAGGGAGGAAGAT 60.491 54.545 0.00 0.00 0.00 2.40
57 58 3.586429 GATGAGGAGAGGGAGGAAGATT 58.414 50.000 0.00 0.00 0.00 2.40
58 59 3.039252 TGAGGAGAGGGAGGAAGATTC 57.961 52.381 0.00 0.00 0.00 2.52
59 60 2.316067 TGAGGAGAGGGAGGAAGATTCA 59.684 50.000 0.00 0.00 0.00 2.57
60 61 3.051496 TGAGGAGAGGGAGGAAGATTCAT 60.051 47.826 0.00 0.00 0.00 2.57
61 62 3.578282 GAGGAGAGGGAGGAAGATTCATC 59.422 52.174 0.00 0.00 37.27 2.92
62 63 3.209612 AGGAGAGGGAGGAAGATTCATCT 59.790 47.826 7.13 0.00 38.04 2.90
71 72 2.231215 AAGATTCATCTTCGGAGGCG 57.769 50.000 0.00 0.00 43.27 5.52
72 73 0.390860 AGATTCATCTTCGGAGGCGG 59.609 55.000 0.00 0.00 31.97 6.13
73 74 0.389391 GATTCATCTTCGGAGGCGGA 59.611 55.000 0.00 0.00 0.00 5.54
74 75 0.830648 ATTCATCTTCGGAGGCGGAA 59.169 50.000 0.00 0.00 0.00 4.30
75 76 0.175760 TTCATCTTCGGAGGCGGAAG 59.824 55.000 8.03 8.03 40.55 3.46
77 78 0.175760 CATCTTCGGAGGCGGAAGAA 59.824 55.000 17.42 5.50 46.95 2.52
78 79 1.123928 ATCTTCGGAGGCGGAAGAAT 58.876 50.000 17.42 7.34 46.95 2.40
79 80 0.460311 TCTTCGGAGGCGGAAGAATC 59.540 55.000 12.97 0.00 43.36 2.52
80 81 0.872021 CTTCGGAGGCGGAAGAATCG 60.872 60.000 8.51 0.00 41.32 3.34
81 82 1.601419 TTCGGAGGCGGAAGAATCGT 61.601 55.000 0.00 0.00 0.00 3.73
82 83 1.589196 CGGAGGCGGAAGAATCGTC 60.589 63.158 0.00 0.00 0.00 4.20
83 84 1.817209 GGAGGCGGAAGAATCGTCT 59.183 57.895 0.00 0.00 45.75 4.18
99 100 4.033990 TCGTCTTCCGAAGATGAGAATG 57.966 45.455 23.58 4.10 45.93 2.67
100 101 3.694566 TCGTCTTCCGAAGATGAGAATGA 59.305 43.478 23.58 6.13 45.93 2.57
101 102 4.041049 CGTCTTCCGAAGATGAGAATGAG 58.959 47.826 21.35 0.71 45.39 2.90
102 103 4.367450 GTCTTCCGAAGATGAGAATGAGG 58.633 47.826 13.92 0.00 40.18 3.86
103 104 4.098654 GTCTTCCGAAGATGAGAATGAGGA 59.901 45.833 13.92 0.00 40.18 3.71
104 105 4.098654 TCTTCCGAAGATGAGAATGAGGAC 59.901 45.833 6.75 0.00 31.20 3.85
105 106 2.359214 TCCGAAGATGAGAATGAGGACG 59.641 50.000 0.00 0.00 0.00 4.79
106 107 2.359214 CCGAAGATGAGAATGAGGACGA 59.641 50.000 0.00 0.00 0.00 4.20
107 108 3.181486 CCGAAGATGAGAATGAGGACGAA 60.181 47.826 0.00 0.00 0.00 3.85
108 109 4.041049 CGAAGATGAGAATGAGGACGAAG 58.959 47.826 0.00 0.00 0.00 3.79
109 110 4.201960 CGAAGATGAGAATGAGGACGAAGA 60.202 45.833 0.00 0.00 0.00 2.87
110 111 4.647424 AGATGAGAATGAGGACGAAGAC 57.353 45.455 0.00 0.00 0.00 3.01
111 112 2.921634 TGAGAATGAGGACGAAGACG 57.078 50.000 0.00 0.00 45.75 4.18
112 113 2.433436 TGAGAATGAGGACGAAGACGA 58.567 47.619 0.00 0.00 42.66 4.20
113 114 2.420372 TGAGAATGAGGACGAAGACGAG 59.580 50.000 0.00 0.00 42.66 4.18
114 115 1.746220 AGAATGAGGACGAAGACGAGG 59.254 52.381 0.00 0.00 42.66 4.63
115 116 1.743958 GAATGAGGACGAAGACGAGGA 59.256 52.381 0.00 0.00 42.66 3.71
116 117 1.096416 ATGAGGACGAAGACGAGGAC 58.904 55.000 0.00 0.00 42.66 3.85
117 118 1.296755 TGAGGACGAAGACGAGGACG 61.297 60.000 0.00 0.00 42.66 4.79
118 119 1.004080 AGGACGAAGACGAGGACGA 60.004 57.895 0.00 0.00 42.66 4.20
119 120 1.020333 AGGACGAAGACGAGGACGAG 61.020 60.000 0.00 0.00 42.66 4.18
120 121 1.424635 GACGAAGACGAGGACGAGG 59.575 63.158 0.00 0.00 42.66 4.63
121 122 1.004080 ACGAAGACGAGGACGAGGA 60.004 57.895 0.00 0.00 42.66 3.71
122 123 0.604780 ACGAAGACGAGGACGAGGAA 60.605 55.000 0.00 0.00 42.66 3.36
123 124 0.733729 CGAAGACGAGGACGAGGAAT 59.266 55.000 0.00 0.00 42.66 3.01
124 125 1.532090 CGAAGACGAGGACGAGGAATG 60.532 57.143 0.00 0.00 42.66 2.67
125 126 1.743958 GAAGACGAGGACGAGGAATGA 59.256 52.381 0.00 0.00 42.66 2.57
126 127 2.060050 AGACGAGGACGAGGAATGAT 57.940 50.000 0.00 0.00 42.66 2.45
127 128 1.678627 AGACGAGGACGAGGAATGATG 59.321 52.381 0.00 0.00 42.66 3.07
128 129 1.405821 GACGAGGACGAGGAATGATGT 59.594 52.381 0.00 0.00 42.66 3.06
129 130 1.135139 ACGAGGACGAGGAATGATGTG 59.865 52.381 0.00 0.00 42.66 3.21
130 131 1.135139 CGAGGACGAGGAATGATGTGT 59.865 52.381 0.00 0.00 42.66 3.72
131 132 2.796383 CGAGGACGAGGAATGATGTGTC 60.796 54.545 0.00 0.00 42.66 3.67
132 133 2.428890 GAGGACGAGGAATGATGTGTCT 59.571 50.000 0.00 0.00 0.00 3.41
133 134 2.834549 AGGACGAGGAATGATGTGTCTT 59.165 45.455 0.00 0.00 0.00 3.01
134 135 3.261897 AGGACGAGGAATGATGTGTCTTT 59.738 43.478 0.00 0.00 0.00 2.52
135 136 3.619038 GGACGAGGAATGATGTGTCTTTC 59.381 47.826 0.00 0.00 37.63 2.62
136 137 4.245660 GACGAGGAATGATGTGTCTTTCA 58.754 43.478 0.00 0.00 39.19 2.69
137 138 4.836825 ACGAGGAATGATGTGTCTTTCAT 58.163 39.130 0.00 0.26 39.19 2.57
138 139 5.248640 ACGAGGAATGATGTGTCTTTCATT 58.751 37.500 0.00 0.00 43.42 2.57
139 140 5.707298 ACGAGGAATGATGTGTCTTTCATTT 59.293 36.000 0.00 0.00 41.42 2.32
140 141 6.025896 CGAGGAATGATGTGTCTTTCATTTG 58.974 40.000 0.24 0.00 41.42 2.32
141 142 6.348786 CGAGGAATGATGTGTCTTTCATTTGT 60.349 38.462 0.24 0.00 41.42 2.83
142 143 6.684686 AGGAATGATGTGTCTTTCATTTGTG 58.315 36.000 0.24 0.00 41.42 3.33
143 144 6.266103 AGGAATGATGTGTCTTTCATTTGTGT 59.734 34.615 0.24 0.00 41.42 3.72
144 145 7.448161 AGGAATGATGTGTCTTTCATTTGTGTA 59.552 33.333 0.24 0.00 41.42 2.90
145 146 8.246180 GGAATGATGTGTCTTTCATTTGTGTAT 58.754 33.333 0.24 0.00 41.42 2.29
146 147 9.630098 GAATGATGTGTCTTTCATTTGTGTATT 57.370 29.630 0.24 0.00 41.42 1.89
147 148 8.975410 ATGATGTGTCTTTCATTTGTGTATTG 57.025 30.769 0.00 0.00 0.00 1.90
148 149 8.164058 TGATGTGTCTTTCATTTGTGTATTGA 57.836 30.769 0.00 0.00 0.00 2.57
149 150 8.628280 TGATGTGTCTTTCATTTGTGTATTGAA 58.372 29.630 0.00 0.00 0.00 2.69
150 151 8.801715 ATGTGTCTTTCATTTGTGTATTGAAC 57.198 30.769 0.00 0.00 0.00 3.18
151 152 7.995289 TGTGTCTTTCATTTGTGTATTGAACT 58.005 30.769 0.00 0.00 0.00 3.01
152 153 8.465999 TGTGTCTTTCATTTGTGTATTGAACTT 58.534 29.630 0.00 0.00 0.00 2.66
153 154 8.745837 GTGTCTTTCATTTGTGTATTGAACTTG 58.254 33.333 0.00 0.00 0.00 3.16
154 155 8.681806 TGTCTTTCATTTGTGTATTGAACTTGA 58.318 29.630 0.00 0.00 0.00 3.02
155 156 9.683069 GTCTTTCATTTGTGTATTGAACTTGAT 57.317 29.630 0.00 0.00 0.00 2.57
159 160 8.296799 TCATTTGTGTATTGAACTTGATTTGC 57.703 30.769 0.00 0.00 0.00 3.68
160 161 7.924947 TCATTTGTGTATTGAACTTGATTTGCA 59.075 29.630 0.00 0.00 0.00 4.08
161 162 8.714179 CATTTGTGTATTGAACTTGATTTGCAT 58.286 29.630 0.00 0.00 0.00 3.96
162 163 8.659925 TTTGTGTATTGAACTTGATTTGCATT 57.340 26.923 0.00 0.00 0.00 3.56
163 164 8.659925 TTGTGTATTGAACTTGATTTGCATTT 57.340 26.923 0.00 0.00 0.00 2.32
164 165 8.659925 TGTGTATTGAACTTGATTTGCATTTT 57.340 26.923 0.00 0.00 0.00 1.82
165 166 8.549548 TGTGTATTGAACTTGATTTGCATTTTG 58.450 29.630 0.00 0.00 0.00 2.44
166 167 8.763356 GTGTATTGAACTTGATTTGCATTTTGA 58.237 29.630 0.00 0.00 0.00 2.69
167 168 9.322773 TGTATTGAACTTGATTTGCATTTTGAA 57.677 25.926 0.00 0.00 0.00 2.69
168 169 9.584839 GTATTGAACTTGATTTGCATTTTGAAC 57.415 29.630 0.00 0.00 0.00 3.18
169 170 7.846644 TTGAACTTGATTTGCATTTTGAACT 57.153 28.000 0.00 0.00 0.00 3.01
170 171 7.846644 TGAACTTGATTTGCATTTTGAACTT 57.153 28.000 0.00 0.00 0.00 2.66
171 172 7.686519 TGAACTTGATTTGCATTTTGAACTTG 58.313 30.769 0.00 0.00 0.00 3.16
172 173 6.607735 ACTTGATTTGCATTTTGAACTTGG 57.392 33.333 0.00 0.00 0.00 3.61
173 174 6.114767 ACTTGATTTGCATTTTGAACTTGGT 58.885 32.000 0.00 0.00 0.00 3.67
174 175 6.598850 ACTTGATTTGCATTTTGAACTTGGTT 59.401 30.769 0.00 0.00 0.00 3.67
175 176 6.360844 TGATTTGCATTTTGAACTTGGTTG 57.639 33.333 0.00 0.00 0.00 3.77
176 177 5.296283 TGATTTGCATTTTGAACTTGGTTGG 59.704 36.000 0.00 0.00 0.00 3.77
177 178 4.478206 TTGCATTTTGAACTTGGTTGGA 57.522 36.364 0.00 0.00 0.00 3.53
178 179 4.686191 TGCATTTTGAACTTGGTTGGAT 57.314 36.364 0.00 0.00 0.00 3.41
179 180 4.378774 TGCATTTTGAACTTGGTTGGATG 58.621 39.130 0.00 0.00 0.00 3.51
180 181 4.100653 TGCATTTTGAACTTGGTTGGATGA 59.899 37.500 0.00 0.00 0.00 2.92
181 182 5.055812 GCATTTTGAACTTGGTTGGATGAA 58.944 37.500 0.00 0.00 0.00 2.57
182 183 5.050159 GCATTTTGAACTTGGTTGGATGAAC 60.050 40.000 0.00 0.00 0.00 3.18
183 184 5.930837 TTTTGAACTTGGTTGGATGAACT 57.069 34.783 0.00 0.00 34.66 3.01
184 185 5.930837 TTTGAACTTGGTTGGATGAACTT 57.069 34.783 0.00 0.00 34.66 2.66
185 186 4.916983 TGAACTTGGTTGGATGAACTTG 57.083 40.909 0.00 0.00 34.66 3.16
186 187 4.277476 TGAACTTGGTTGGATGAACTTGT 58.723 39.130 0.00 0.00 34.66 3.16
187 188 4.097741 TGAACTTGGTTGGATGAACTTGTG 59.902 41.667 0.00 0.00 34.66 3.33
188 189 2.958355 ACTTGGTTGGATGAACTTGTGG 59.042 45.455 0.00 0.00 34.66 4.17
189 190 1.993956 TGGTTGGATGAACTTGTGGG 58.006 50.000 0.00 0.00 34.66 4.61
190 191 0.603065 GGTTGGATGAACTTGTGGGC 59.397 55.000 0.00 0.00 34.66 5.36
191 192 1.327303 GTTGGATGAACTTGTGGGCA 58.673 50.000 0.00 0.00 0.00 5.36
192 193 1.895131 GTTGGATGAACTTGTGGGCAT 59.105 47.619 0.00 0.00 0.00 4.40
193 194 1.548081 TGGATGAACTTGTGGGCATG 58.452 50.000 0.00 0.00 0.00 4.06
194 195 1.075212 TGGATGAACTTGTGGGCATGA 59.925 47.619 0.00 0.00 0.00 3.07
195 196 2.291735 TGGATGAACTTGTGGGCATGAT 60.292 45.455 0.00 0.00 0.00 2.45
196 197 2.762327 GGATGAACTTGTGGGCATGATT 59.238 45.455 0.00 0.00 0.00 2.57
197 198 3.196254 GGATGAACTTGTGGGCATGATTT 59.804 43.478 0.00 0.00 0.00 2.17
198 199 4.322953 GGATGAACTTGTGGGCATGATTTT 60.323 41.667 0.00 0.00 0.00 1.82
199 200 3.992643 TGAACTTGTGGGCATGATTTTG 58.007 40.909 0.00 0.00 0.00 2.44
200 201 3.640498 TGAACTTGTGGGCATGATTTTGA 59.360 39.130 0.00 0.00 0.00 2.69
201 202 4.100653 TGAACTTGTGGGCATGATTTTGAA 59.899 37.500 0.00 0.00 0.00 2.69
202 203 3.993920 ACTTGTGGGCATGATTTTGAAC 58.006 40.909 0.00 0.00 0.00 3.18
203 204 3.642848 ACTTGTGGGCATGATTTTGAACT 59.357 39.130 0.00 0.00 0.00 3.01
204 205 4.101430 ACTTGTGGGCATGATTTTGAACTT 59.899 37.500 0.00 0.00 0.00 2.66
205 206 3.992643 TGTGGGCATGATTTTGAACTTG 58.007 40.909 0.00 0.00 0.00 3.16
206 207 3.387374 TGTGGGCATGATTTTGAACTTGT 59.613 39.130 0.00 0.00 0.00 3.16
207 208 3.742369 GTGGGCATGATTTTGAACTTGTG 59.258 43.478 0.00 0.00 0.00 3.33
208 209 3.244146 TGGGCATGATTTTGAACTTGTGG 60.244 43.478 0.00 0.00 0.00 4.17
209 210 3.328505 GGCATGATTTTGAACTTGTGGG 58.671 45.455 0.00 0.00 0.00 4.61
210 211 2.738314 GCATGATTTTGAACTTGTGGGC 59.262 45.455 0.00 0.00 0.00 5.36
211 212 3.803021 GCATGATTTTGAACTTGTGGGCA 60.803 43.478 0.00 0.00 0.00 5.36
212 213 4.571919 CATGATTTTGAACTTGTGGGCAT 58.428 39.130 0.00 0.00 0.00 4.40
213 214 3.992643 TGATTTTGAACTTGTGGGCATG 58.007 40.909 0.00 0.00 0.00 4.06
214 215 3.640498 TGATTTTGAACTTGTGGGCATGA 59.360 39.130 0.00 0.00 0.00 3.07
215 216 4.100653 TGATTTTGAACTTGTGGGCATGAA 59.899 37.500 0.00 0.00 0.00 2.57
216 217 3.451141 TTTGAACTTGTGGGCATGAAC 57.549 42.857 0.00 0.00 0.00 3.18
217 218 2.363306 TGAACTTGTGGGCATGAACT 57.637 45.000 0.00 0.00 0.00 3.01
218 219 2.665165 TGAACTTGTGGGCATGAACTT 58.335 42.857 0.00 0.00 0.00 2.66
219 220 3.030291 TGAACTTGTGGGCATGAACTTT 58.970 40.909 0.00 0.00 0.00 2.66
220 221 3.450457 TGAACTTGTGGGCATGAACTTTT 59.550 39.130 0.00 0.00 0.00 2.27
221 222 3.733443 ACTTGTGGGCATGAACTTTTC 57.267 42.857 0.00 0.00 0.00 2.29
222 223 3.299503 ACTTGTGGGCATGAACTTTTCT 58.700 40.909 0.00 0.00 0.00 2.52
223 224 3.706086 ACTTGTGGGCATGAACTTTTCTT 59.294 39.130 0.00 0.00 0.00 2.52
224 225 4.202151 ACTTGTGGGCATGAACTTTTCTTC 60.202 41.667 0.00 0.00 0.00 2.87
225 226 3.295093 TGTGGGCATGAACTTTTCTTCA 58.705 40.909 0.00 0.00 34.65 3.02
226 227 3.896888 TGTGGGCATGAACTTTTCTTCAT 59.103 39.130 0.00 0.00 40.81 2.57
227 228 4.022068 TGTGGGCATGAACTTTTCTTCATC 60.022 41.667 0.00 0.00 38.57 2.92
228 229 4.022068 GTGGGCATGAACTTTTCTTCATCA 60.022 41.667 0.00 0.00 38.57 3.07
229 230 4.588106 TGGGCATGAACTTTTCTTCATCAA 59.412 37.500 0.00 0.00 38.57 2.57
230 231 4.925646 GGGCATGAACTTTTCTTCATCAAC 59.074 41.667 0.00 0.00 38.57 3.18
231 232 5.279156 GGGCATGAACTTTTCTTCATCAACT 60.279 40.000 0.00 0.00 38.57 3.16
232 233 6.218746 GGCATGAACTTTTCTTCATCAACTT 58.781 36.000 0.00 0.00 38.57 2.66
233 234 6.145048 GGCATGAACTTTTCTTCATCAACTTG 59.855 38.462 0.00 0.00 38.57 3.16
234 235 6.698766 GCATGAACTTTTCTTCATCAACTTGT 59.301 34.615 0.00 0.00 38.57 3.16
235 236 7.223387 GCATGAACTTTTCTTCATCAACTTGTT 59.777 33.333 0.00 0.00 38.57 2.83
236 237 9.090692 CATGAACTTTTCTTCATCAACTTGTTT 57.909 29.630 0.00 0.00 38.57 2.83
237 238 8.464770 TGAACTTTTCTTCATCAACTTGTTTG 57.535 30.769 0.00 0.00 36.42 2.93
238 239 8.087750 TGAACTTTTCTTCATCAACTTGTTTGT 58.912 29.630 0.00 0.00 36.49 2.83
239 240 7.816945 ACTTTTCTTCATCAACTTGTTTGTG 57.183 32.000 0.00 0.00 36.49 3.33
240 241 7.378181 ACTTTTCTTCATCAACTTGTTTGTGT 58.622 30.769 0.00 0.00 36.49 3.72
241 242 7.329226 ACTTTTCTTCATCAACTTGTTTGTGTG 59.671 33.333 0.00 0.00 36.49 3.82
242 243 6.507958 TTCTTCATCAACTTGTTTGTGTGA 57.492 33.333 0.00 0.00 36.49 3.58
243 244 6.507958 TCTTCATCAACTTGTTTGTGTGAA 57.492 33.333 0.00 0.00 37.96 3.18
244 245 6.918626 TCTTCATCAACTTGTTTGTGTGAAA 58.081 32.000 0.00 0.00 38.84 2.69
245 246 7.546358 TCTTCATCAACTTGTTTGTGTGAAAT 58.454 30.769 0.00 0.00 38.84 2.17
246 247 8.034215 TCTTCATCAACTTGTTTGTGTGAAATT 58.966 29.630 0.00 0.00 38.84 1.82
247 248 8.545229 TTCATCAACTTGTTTGTGTGAAATTT 57.455 26.923 0.00 0.00 37.66 1.82
248 249 8.545229 TCATCAACTTGTTTGTGTGAAATTTT 57.455 26.923 0.00 0.00 36.49 1.82
249 250 9.645059 TCATCAACTTGTTTGTGTGAAATTTTA 57.355 25.926 0.00 0.00 36.49 1.52
275 276 7.915293 ATGTCATGTTCATTGCATTTTGAAT 57.085 28.000 9.58 0.00 34.60 2.57
276 277 7.123160 TGTCATGTTCATTGCATTTTGAATG 57.877 32.000 9.58 6.30 34.60 2.67
277 278 6.706716 TGTCATGTTCATTGCATTTTGAATGT 59.293 30.769 9.58 1.69 34.60 2.71
278 279 7.226918 TGTCATGTTCATTGCATTTTGAATGTT 59.773 29.630 9.58 0.00 34.60 2.71
279 280 7.742963 GTCATGTTCATTGCATTTTGAATGTTC 59.257 33.333 9.58 0.55 34.60 3.18
280 281 7.441458 TCATGTTCATTGCATTTTGAATGTTCA 59.559 29.630 9.58 4.98 34.60 3.18
281 282 7.549615 TGTTCATTGCATTTTGAATGTTCAA 57.450 28.000 4.16 4.16 44.78 2.69
282 283 7.408123 TGTTCATTGCATTTTGAATGTTCAAC 58.592 30.769 7.63 0.00 45.99 3.18
283 284 7.280428 TGTTCATTGCATTTTGAATGTTCAACT 59.720 29.630 7.63 0.00 45.99 3.16
284 285 7.789273 TCATTGCATTTTGAATGTTCAACTT 57.211 28.000 7.63 0.00 45.99 2.66
285 286 7.853524 TCATTGCATTTTGAATGTTCAACTTC 58.146 30.769 7.63 0.00 45.99 3.01
286 287 7.494952 TCATTGCATTTTGAATGTTCAACTTCA 59.505 29.630 7.63 0.00 45.99 3.02
287 288 7.789273 TTGCATTTTGAATGTTCAACTTCAT 57.211 28.000 7.63 0.00 45.99 2.57
288 289 7.789273 TGCATTTTGAATGTTCAACTTCATT 57.211 28.000 7.63 0.00 45.99 2.57
289 290 8.211116 TGCATTTTGAATGTTCAACTTCATTT 57.789 26.923 7.63 0.00 45.99 2.32
290 291 8.675504 TGCATTTTGAATGTTCAACTTCATTTT 58.324 25.926 7.63 0.00 45.99 1.82
291 292 8.949953 GCATTTTGAATGTTCAACTTCATTTTG 58.050 29.630 7.63 4.07 45.99 2.44
292 293 9.991388 CATTTTGAATGTTCAACTTCATTTTGT 57.009 25.926 7.63 0.00 45.99 2.83
293 294 9.991388 ATTTTGAATGTTCAACTTCATTTTGTG 57.009 25.926 7.63 0.00 45.99 3.33
294 295 8.545229 TTTGAATGTTCAACTTCATTTTGTGT 57.455 26.923 7.63 0.00 45.99 3.72
295 296 8.545229 TTGAATGTTCAACTTCATTTTGTGTT 57.455 26.923 4.16 0.00 41.88 3.32
296 297 8.183830 TGAATGTTCAACTTCATTTTGTGTTC 57.816 30.769 0.00 0.00 34.92 3.18
297 298 7.816513 TGAATGTTCAACTTCATTTTGTGTTCA 59.183 29.630 0.00 0.00 34.92 3.18
298 299 8.545229 AATGTTCAACTTCATTTTGTGTTCAA 57.455 26.923 0.00 0.00 31.35 2.69
299 300 7.953158 TGTTCAACTTCATTTTGTGTTCAAA 57.047 28.000 0.00 0.00 41.10 2.69
312 313 7.536895 TTTGTGTTCAAAATGCCATATATGC 57.463 32.000 7.24 3.97 40.08 3.14
313 314 6.218108 TGTGTTCAAAATGCCATATATGCA 57.782 33.333 7.24 9.35 43.97 3.96
314 315 6.637657 TGTGTTCAAAATGCCATATATGCAA 58.362 32.000 7.24 0.00 42.92 4.08
315 316 7.273712 TGTGTTCAAAATGCCATATATGCAAT 58.726 30.769 7.24 0.28 42.92 3.56
316 317 7.224949 TGTGTTCAAAATGCCATATATGCAATG 59.775 33.333 7.24 9.65 42.92 2.82
317 318 6.203145 TGTTCAAAATGCCATATATGCAATGC 59.797 34.615 7.24 0.00 42.92 3.56
318 319 5.239351 TCAAAATGCCATATATGCAATGCC 58.761 37.500 7.24 0.00 42.92 4.40
319 320 3.899052 AATGCCATATATGCAATGCCC 57.101 42.857 7.24 0.00 42.92 5.36
320 321 1.559368 TGCCATATATGCAATGCCCC 58.441 50.000 7.24 0.00 35.40 5.80
321 322 0.457035 GCCATATATGCAATGCCCCG 59.543 55.000 7.24 0.00 0.00 5.73
322 323 1.105457 CCATATATGCAATGCCCCGG 58.895 55.000 7.24 0.00 0.00 5.73
323 324 0.457035 CATATATGCAATGCCCCGGC 59.543 55.000 1.53 0.00 42.35 6.13
324 325 1.031571 ATATATGCAATGCCCCGGCG 61.032 55.000 1.53 0.00 45.51 6.46
325 326 2.118233 TATATGCAATGCCCCGGCGA 62.118 55.000 9.30 0.00 45.51 5.54
326 327 3.976497 TATATGCAATGCCCCGGCGAG 62.976 57.143 9.30 0.00 45.51 5.03
359 360 4.050955 TTTTTACGCGCTGCTGGA 57.949 50.000 5.73 0.00 0.00 3.86
360 361 1.866237 TTTTTACGCGCTGCTGGAG 59.134 52.632 5.73 0.00 0.00 3.86
361 362 2.182614 TTTTTACGCGCTGCTGGAGC 62.183 55.000 11.48 11.48 45.20 4.70
382 383 3.307262 GCGCGCGCTGCATTTTAG 61.307 61.111 44.38 15.91 46.97 1.85
383 384 3.307262 CGCGCGCTGCATTTTAGC 61.307 61.111 30.48 6.56 46.97 3.09
389 390 2.793946 CTGCATTTTAGCGCGGCT 59.206 55.556 8.83 8.38 43.41 5.52
390 391 1.584483 CTGCATTTTAGCGCGGCTG 60.584 57.895 8.83 0.53 40.10 4.85
391 392 2.951227 GCATTTTAGCGCGGCTGC 60.951 61.111 8.83 7.70 40.10 5.25
393 394 1.584483 CATTTTAGCGCGGCTGCTG 60.584 57.895 22.96 10.42 46.70 4.41
394 395 2.764314 ATTTTAGCGCGGCTGCTGG 61.764 57.895 22.96 1.40 46.70 4.85
395 396 3.892740 TTTTAGCGCGGCTGCTGGA 62.893 57.895 22.96 12.50 46.70 3.86
396 397 4.819761 TTAGCGCGGCTGCTGGAG 62.820 66.667 22.96 0.14 46.70 3.86
457 458 2.709475 GCATTCGGCGCCTGTTAG 59.291 61.111 26.68 8.63 0.00 2.34
458 459 1.813753 GCATTCGGCGCCTGTTAGA 60.814 57.895 26.68 11.29 0.00 2.10
459 460 1.766143 GCATTCGGCGCCTGTTAGAG 61.766 60.000 26.68 6.92 0.00 2.43
460 461 0.179111 CATTCGGCGCCTGTTAGAGA 60.179 55.000 26.68 9.61 0.00 3.10
461 462 0.753262 ATTCGGCGCCTGTTAGAGAT 59.247 50.000 26.68 7.38 0.00 2.75
462 463 0.179111 TTCGGCGCCTGTTAGAGATG 60.179 55.000 26.68 4.37 0.00 2.90
463 464 2.240500 CGGCGCCTGTTAGAGATGC 61.241 63.158 26.68 0.00 0.00 3.91
464 465 1.144936 GGCGCCTGTTAGAGATGCT 59.855 57.895 22.15 0.00 0.00 3.79
465 466 0.878086 GGCGCCTGTTAGAGATGCTC 60.878 60.000 22.15 0.00 0.00 4.26
466 467 0.103937 GCGCCTGTTAGAGATGCTCT 59.896 55.000 0.00 2.22 43.83 4.09
467 468 1.472376 GCGCCTGTTAGAGATGCTCTT 60.472 52.381 0.00 0.00 41.50 2.85
468 469 2.223829 GCGCCTGTTAGAGATGCTCTTA 60.224 50.000 0.00 0.00 41.50 2.10
469 470 3.553922 GCGCCTGTTAGAGATGCTCTTAT 60.554 47.826 0.00 0.00 41.50 1.73
470 471 3.986572 CGCCTGTTAGAGATGCTCTTATG 59.013 47.826 1.88 0.00 41.50 1.90
471 472 4.314121 GCCTGTTAGAGATGCTCTTATGG 58.686 47.826 1.88 2.60 41.50 2.74
472 473 4.314121 CCTGTTAGAGATGCTCTTATGGC 58.686 47.826 1.88 0.00 41.50 4.40
473 474 4.314121 CTGTTAGAGATGCTCTTATGGCC 58.686 47.826 0.00 0.00 41.50 5.36
474 475 3.969976 TGTTAGAGATGCTCTTATGGCCT 59.030 43.478 3.32 0.00 41.50 5.19
475 476 4.039730 TGTTAGAGATGCTCTTATGGCCTC 59.960 45.833 3.32 0.00 41.50 4.70
476 477 2.687297 AGAGATGCTCTTATGGCCTCA 58.313 47.619 3.32 0.00 37.60 3.86
477 478 3.044156 AGAGATGCTCTTATGGCCTCAA 58.956 45.455 3.32 0.00 37.60 3.02
478 479 3.457380 AGAGATGCTCTTATGGCCTCAAA 59.543 43.478 3.32 0.00 37.60 2.69
479 480 4.080129 AGAGATGCTCTTATGGCCTCAAAA 60.080 41.667 3.32 0.00 37.60 2.44
480 481 3.950395 AGATGCTCTTATGGCCTCAAAAC 59.050 43.478 3.32 0.00 0.00 2.43
481 482 2.083774 TGCTCTTATGGCCTCAAAACG 58.916 47.619 3.32 0.00 0.00 3.60
482 483 2.084546 GCTCTTATGGCCTCAAAACGT 58.915 47.619 3.32 0.00 0.00 3.99
483 484 2.488153 GCTCTTATGGCCTCAAAACGTT 59.512 45.455 3.32 0.00 0.00 3.99
484 485 3.057526 GCTCTTATGGCCTCAAAACGTTT 60.058 43.478 7.96 7.96 0.00 3.60
485 486 4.723248 CTCTTATGGCCTCAAAACGTTTC 58.277 43.478 15.01 0.73 0.00 2.78
486 487 3.187637 TCTTATGGCCTCAAAACGTTTCG 59.812 43.478 15.01 2.62 0.00 3.46
487 488 0.039527 ATGGCCTCAAAACGTTTCGC 60.040 50.000 15.01 12.94 0.00 4.70
488 489 1.357334 GGCCTCAAAACGTTTCGCA 59.643 52.632 15.01 0.18 0.00 5.10
489 490 0.660300 GGCCTCAAAACGTTTCGCAG 60.660 55.000 15.01 10.01 0.00 5.18
490 491 1.268778 GCCTCAAAACGTTTCGCAGC 61.269 55.000 15.01 11.61 0.00 5.25
491 492 0.028770 CCTCAAAACGTTTCGCAGCA 59.971 50.000 15.01 0.00 0.00 4.41
492 493 1.388888 CTCAAAACGTTTCGCAGCAG 58.611 50.000 15.01 0.75 0.00 4.24
493 494 0.730265 TCAAAACGTTTCGCAGCAGT 59.270 45.000 15.01 0.00 0.00 4.40
494 495 1.131504 TCAAAACGTTTCGCAGCAGTT 59.868 42.857 15.01 0.00 0.00 3.16
495 496 1.917303 CAAAACGTTTCGCAGCAGTTT 59.083 42.857 15.01 0.00 36.70 2.66
496 497 1.822581 AAACGTTTCGCAGCAGTTTC 58.177 45.000 7.96 0.00 30.24 2.78
497 498 0.730265 AACGTTTCGCAGCAGTTTCA 59.270 45.000 0.00 0.00 0.00 2.69
498 499 0.027586 ACGTTTCGCAGCAGTTTCAC 59.972 50.000 0.00 0.00 0.00 3.18
499 500 0.027455 CGTTTCGCAGCAGTTTCACA 59.973 50.000 0.00 0.00 0.00 3.58
500 501 1.746760 GTTTCGCAGCAGTTTCACAG 58.253 50.000 0.00 0.00 0.00 3.66
501 502 1.330521 GTTTCGCAGCAGTTTCACAGA 59.669 47.619 0.00 0.00 0.00 3.41
502 503 1.662517 TTCGCAGCAGTTTCACAGAA 58.337 45.000 0.00 0.00 0.00 3.02
503 504 1.662517 TCGCAGCAGTTTCACAGAAA 58.337 45.000 0.00 0.00 0.00 2.52
504 505 2.013400 TCGCAGCAGTTTCACAGAAAA 58.987 42.857 0.00 0.00 0.00 2.29
505 506 2.111756 CGCAGCAGTTTCACAGAAAAC 58.888 47.619 0.00 0.00 39.03 2.43
507 508 3.002246 CGCAGCAGTTTCACAGAAAACTA 59.998 43.478 2.01 0.00 45.36 2.24
508 509 4.319766 CGCAGCAGTTTCACAGAAAACTAT 60.320 41.667 2.01 0.00 45.36 2.12
509 510 5.523369 GCAGCAGTTTCACAGAAAACTATT 58.477 37.500 2.01 0.00 45.36 1.73
510 511 5.400485 GCAGCAGTTTCACAGAAAACTATTG 59.600 40.000 2.01 5.32 45.36 1.90
511 512 6.728200 CAGCAGTTTCACAGAAAACTATTGA 58.272 36.000 2.01 0.00 45.36 2.57
512 513 7.195646 CAGCAGTTTCACAGAAAACTATTGAA 58.804 34.615 2.01 0.00 45.36 2.69
513 514 7.864379 CAGCAGTTTCACAGAAAACTATTGAAT 59.136 33.333 2.01 0.00 45.36 2.57
514 515 8.416329 AGCAGTTTCACAGAAAACTATTGAATT 58.584 29.630 2.01 0.00 45.36 2.17
515 516 9.677567 GCAGTTTCACAGAAAACTATTGAATTA 57.322 29.630 2.01 0.00 45.36 1.40
518 519 9.113876 GTTTCACAGAAAACTATTGAATTACCG 57.886 33.333 0.00 0.00 36.44 4.02
519 520 6.837992 TCACAGAAAACTATTGAATTACCGC 58.162 36.000 0.00 0.00 0.00 5.68
520 521 6.428465 TCACAGAAAACTATTGAATTACCGCA 59.572 34.615 0.00 0.00 0.00 5.69
521 522 7.041030 TCACAGAAAACTATTGAATTACCGCAA 60.041 33.333 0.00 0.00 0.00 4.85
522 523 7.271223 CACAGAAAACTATTGAATTACCGCAAG 59.729 37.037 0.00 0.00 0.00 4.01
523 524 7.174253 ACAGAAAACTATTGAATTACCGCAAGA 59.826 33.333 0.00 0.00 43.02 3.02
524 525 8.020819 CAGAAAACTATTGAATTACCGCAAGAA 58.979 33.333 0.00 0.00 43.02 2.52
525 526 8.021396 AGAAAACTATTGAATTACCGCAAGAAC 58.979 33.333 0.00 0.00 43.02 3.01
526 527 6.811253 AACTATTGAATTACCGCAAGAACA 57.189 33.333 0.00 0.00 43.02 3.18
527 528 6.422776 ACTATTGAATTACCGCAAGAACAG 57.577 37.500 0.00 0.00 43.02 3.16
528 529 4.701956 ATTGAATTACCGCAAGAACAGG 57.298 40.909 0.00 0.00 43.02 4.00
529 530 2.432444 TGAATTACCGCAAGAACAGGG 58.568 47.619 0.00 0.00 43.02 4.45
530 531 2.039216 TGAATTACCGCAAGAACAGGGA 59.961 45.455 0.00 0.00 43.02 4.20
531 532 2.871096 ATTACCGCAAGAACAGGGAA 57.129 45.000 0.00 0.00 43.02 3.97
532 533 2.642154 TTACCGCAAGAACAGGGAAA 57.358 45.000 0.00 0.00 43.02 3.13
533 534 2.642154 TACCGCAAGAACAGGGAAAA 57.358 45.000 0.00 0.00 43.02 2.29
534 535 1.318576 ACCGCAAGAACAGGGAAAAG 58.681 50.000 0.00 0.00 43.02 2.27
535 536 0.598065 CCGCAAGAACAGGGAAAAGG 59.402 55.000 0.00 0.00 43.02 3.11
536 537 1.604604 CGCAAGAACAGGGAAAAGGA 58.395 50.000 0.00 0.00 43.02 3.36
537 538 2.162681 CGCAAGAACAGGGAAAAGGAT 58.837 47.619 0.00 0.00 43.02 3.24
538 539 3.343617 CGCAAGAACAGGGAAAAGGATA 58.656 45.455 0.00 0.00 43.02 2.59
539 540 3.756434 CGCAAGAACAGGGAAAAGGATAA 59.244 43.478 0.00 0.00 43.02 1.75
540 541 4.379499 CGCAAGAACAGGGAAAAGGATAAC 60.379 45.833 0.00 0.00 43.02 1.89
541 542 4.082190 GCAAGAACAGGGAAAAGGATAACC 60.082 45.833 0.00 0.00 0.00 2.85
542 543 4.317530 AGAACAGGGAAAAGGATAACCC 57.682 45.455 0.00 0.00 42.36 4.11
543 544 2.801077 ACAGGGAAAAGGATAACCCG 57.199 50.000 0.00 0.00 46.13 5.28
544 545 1.340697 ACAGGGAAAAGGATAACCCGC 60.341 52.381 0.00 0.00 46.13 6.13
545 546 0.257905 AGGGAAAAGGATAACCCGCC 59.742 55.000 0.00 0.00 46.13 6.13
546 547 0.257905 GGGAAAAGGATAACCCGCCT 59.742 55.000 0.00 0.00 40.87 5.52
547 548 1.341679 GGGAAAAGGATAACCCGCCTT 60.342 52.381 0.00 0.00 46.09 4.35
551 552 2.891191 AAGGATAACCCGCCTTTCAA 57.109 45.000 0.00 0.00 41.60 2.69
552 553 2.891191 AGGATAACCCGCCTTTCAAA 57.109 45.000 0.00 0.00 40.87 2.69
553 554 2.443416 AGGATAACCCGCCTTTCAAAC 58.557 47.619 0.00 0.00 40.87 2.93
554 555 2.164338 GGATAACCCGCCTTTCAAACA 58.836 47.619 0.00 0.00 0.00 2.83
555 556 2.163613 GGATAACCCGCCTTTCAAACAG 59.836 50.000 0.00 0.00 0.00 3.16
556 557 1.611519 TAACCCGCCTTTCAAACAGG 58.388 50.000 0.00 0.00 34.08 4.00
557 558 1.112916 AACCCGCCTTTCAAACAGGG 61.113 55.000 0.00 0.00 44.17 4.45
558 559 2.275380 CCCGCCTTTCAAACAGGGG 61.275 63.158 0.00 0.00 42.73 4.79
559 560 2.650778 CGCCTTTCAAACAGGGGC 59.349 61.111 0.00 0.00 37.53 5.80
560 561 1.903404 CGCCTTTCAAACAGGGGCT 60.903 57.895 0.00 0.00 40.52 5.19
561 562 1.463553 CGCCTTTCAAACAGGGGCTT 61.464 55.000 0.00 0.00 40.52 4.35
562 563 0.033920 GCCTTTCAAACAGGGGCTTG 59.966 55.000 0.00 0.00 39.68 4.01
563 564 1.703411 CCTTTCAAACAGGGGCTTGA 58.297 50.000 0.00 0.00 0.00 3.02
564 565 1.615392 CCTTTCAAACAGGGGCTTGAG 59.385 52.381 0.00 0.00 33.30 3.02
565 566 2.586425 CTTTCAAACAGGGGCTTGAGA 58.414 47.619 0.00 0.00 33.30 3.27
566 567 2.978156 TTCAAACAGGGGCTTGAGAT 57.022 45.000 0.00 0.00 33.30 2.75
567 568 2.205022 TCAAACAGGGGCTTGAGATG 57.795 50.000 0.00 0.00 0.00 2.90
568 569 1.704628 TCAAACAGGGGCTTGAGATGA 59.295 47.619 0.00 0.00 0.00 2.92
569 570 2.108075 TCAAACAGGGGCTTGAGATGAA 59.892 45.455 0.00 0.00 0.00 2.57
570 571 2.892852 CAAACAGGGGCTTGAGATGAAA 59.107 45.455 0.00 0.00 0.00 2.69
571 572 2.503895 ACAGGGGCTTGAGATGAAAG 57.496 50.000 0.00 0.00 0.00 2.62
572 573 1.988107 ACAGGGGCTTGAGATGAAAGA 59.012 47.619 0.00 0.00 0.00 2.52
573 574 2.376518 ACAGGGGCTTGAGATGAAAGAA 59.623 45.455 0.00 0.00 0.00 2.52
574 575 3.181429 ACAGGGGCTTGAGATGAAAGAAA 60.181 43.478 0.00 0.00 0.00 2.52
575 576 3.828451 CAGGGGCTTGAGATGAAAGAAAA 59.172 43.478 0.00 0.00 0.00 2.29
576 577 4.281688 CAGGGGCTTGAGATGAAAGAAAAA 59.718 41.667 0.00 0.00 0.00 1.94
593 594 1.632589 AAAATGTTGGCAGGAGGTCC 58.367 50.000 0.00 0.00 0.00 4.46
595 596 0.779997 AATGTTGGCAGGAGGTCCTT 59.220 50.000 0.00 0.00 46.09 3.36
596 597 0.329596 ATGTTGGCAGGAGGTCCTTC 59.670 55.000 0.00 0.00 46.09 3.46
597 598 1.059584 TGTTGGCAGGAGGTCCTTCA 61.060 55.000 0.00 0.00 46.09 3.02
598 599 0.110486 GTTGGCAGGAGGTCCTTCAA 59.890 55.000 0.00 1.93 46.09 2.69
599 600 1.075601 TTGGCAGGAGGTCCTTCAAT 58.924 50.000 0.00 0.00 46.09 2.57
600 601 0.620556 TGGCAGGAGGTCCTTCAATC 59.379 55.000 0.00 0.00 46.09 2.67
601 602 0.620556 GGCAGGAGGTCCTTCAATCA 59.379 55.000 0.00 0.00 46.09 2.57
602 603 1.213926 GGCAGGAGGTCCTTCAATCAT 59.786 52.381 0.00 0.00 46.09 2.45
603 604 2.570135 GCAGGAGGTCCTTCAATCATC 58.430 52.381 0.00 0.00 46.09 2.92
604 605 2.172293 GCAGGAGGTCCTTCAATCATCT 59.828 50.000 0.00 0.00 46.09 2.90
605 606 3.371380 GCAGGAGGTCCTTCAATCATCTT 60.371 47.826 0.00 0.00 46.09 2.40
606 607 4.141620 GCAGGAGGTCCTTCAATCATCTTA 60.142 45.833 0.00 0.00 46.09 2.10
607 608 5.363939 CAGGAGGTCCTTCAATCATCTTAC 58.636 45.833 0.00 0.00 46.09 2.34
608 609 5.032846 AGGAGGTCCTTCAATCATCTTACA 58.967 41.667 0.00 0.00 46.09 2.41
609 610 5.669447 AGGAGGTCCTTCAATCATCTTACAT 59.331 40.000 0.00 0.00 46.09 2.29
610 611 6.846505 AGGAGGTCCTTCAATCATCTTACATA 59.153 38.462 0.00 0.00 46.09 2.29
611 612 7.016072 AGGAGGTCCTTCAATCATCTTACATAG 59.984 40.741 0.00 0.00 46.09 2.23
612 613 7.015682 GGAGGTCCTTCAATCATCTTACATAGA 59.984 40.741 0.00 0.00 37.28 1.98
613 614 7.961351 AGGTCCTTCAATCATCTTACATAGAG 58.039 38.462 0.00 0.00 36.02 2.43
614 615 7.016072 AGGTCCTTCAATCATCTTACATAGAGG 59.984 40.741 0.00 0.00 36.02 3.69
615 616 7.015682 GGTCCTTCAATCATCTTACATAGAGGA 59.984 40.741 0.00 0.00 46.68 3.71
616 617 8.087750 GTCCTTCAATCATCTTACATAGAGGAG 58.912 40.741 0.00 0.00 45.92 3.69
617 618 7.234371 TCCTTCAATCATCTTACATAGAGGAGG 59.766 40.741 0.00 0.00 45.92 4.30
618 619 7.234371 CCTTCAATCATCTTACATAGAGGAGGA 59.766 40.741 0.00 0.00 45.92 3.71
619 620 8.553085 TTCAATCATCTTACATAGAGGAGGAA 57.447 34.615 0.00 0.00 45.92 3.36
620 621 8.553085 TCAATCATCTTACATAGAGGAGGAAA 57.447 34.615 0.00 0.00 45.92 3.13
621 622 9.163894 TCAATCATCTTACATAGAGGAGGAAAT 57.836 33.333 0.00 0.00 45.92 2.17
624 625 9.607333 ATCATCTTACATAGAGGAGGAAATACA 57.393 33.333 0.00 0.00 45.92 2.29
625 626 9.083422 TCATCTTACATAGAGGAGGAAATACAG 57.917 37.037 0.00 0.00 38.68 2.74
626 627 7.291411 TCTTACATAGAGGAGGAAATACAGC 57.709 40.000 0.00 0.00 0.00 4.40
627 628 7.069986 TCTTACATAGAGGAGGAAATACAGCT 58.930 38.462 0.00 0.00 0.00 4.24
628 629 8.225416 TCTTACATAGAGGAGGAAATACAGCTA 58.775 37.037 0.00 0.00 0.00 3.32
759 760 3.220110 CCGTATAGAGCTGGGTAGTTCA 58.780 50.000 0.00 0.00 36.69 3.18
861 863 1.675310 CCGTGGCTCAGGAAATGCA 60.675 57.895 0.00 0.00 0.00 3.96
1011 1014 2.935238 GCTCGTTGCAATGGAGTTCCTA 60.935 50.000 23.28 3.15 42.31 2.94
1175 1191 3.807622 GTGATGGAAGAAGTGAACGACAA 59.192 43.478 0.00 0.00 0.00 3.18
1451 1468 3.044156 ACTGTAGATGGCATGGACTGAT 58.956 45.455 3.81 0.00 0.00 2.90
1560 1577 6.546772 TGCTGCATTTATTGTTGGATCAGATA 59.453 34.615 0.00 0.00 0.00 1.98
1871 1916 3.011818 TGTTGCATTATCTGAGCTGTGG 58.988 45.455 0.00 0.00 0.00 4.17
1910 1955 4.389687 CGTGCTAAAATAGGTAACCGTTGT 59.610 41.667 0.00 0.00 37.17 3.32
2032 2090 2.919807 GCTTCTGCTTTACTGCTGCAAC 60.920 50.000 3.02 0.00 36.22 4.17
2097 2155 5.971763 AGTAGCTGACTTTGAGAATACTGG 58.028 41.667 0.00 0.00 33.13 4.00
2275 2336 2.200373 AGGCAATACGGAGTTTGCTT 57.800 45.000 5.96 0.00 46.03 3.91
2630 2699 3.124560 GCCTTAATAAGACTGCTCCGAC 58.875 50.000 0.83 0.00 0.00 4.79
3240 3327 0.696501 GGTGGAAGTGCCCCTAAGAA 59.303 55.000 0.00 0.00 34.97 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 0.321564 TGAAGCTCCGATGGTGTTGG 60.322 55.000 0.00 0.00 0.00 3.77
2 3 0.798776 GTGAAGCTCCGATGGTGTTG 59.201 55.000 0.00 0.00 0.00 3.33
3 4 0.670546 CGTGAAGCTCCGATGGTGTT 60.671 55.000 0.00 0.00 0.00 3.32
4 5 1.079819 CGTGAAGCTCCGATGGTGT 60.080 57.895 0.00 0.00 0.00 4.16
5 6 1.079819 ACGTGAAGCTCCGATGGTG 60.080 57.895 7.31 0.00 0.00 4.17
6 7 1.079819 CACGTGAAGCTCCGATGGT 60.080 57.895 10.90 0.00 0.00 3.55
7 8 0.179100 ATCACGTGAAGCTCCGATGG 60.179 55.000 24.13 0.00 0.00 3.51
8 9 0.926155 CATCACGTGAAGCTCCGATG 59.074 55.000 24.13 9.78 0.00 3.84
9 10 0.807667 GCATCACGTGAAGCTCCGAT 60.808 55.000 32.16 8.31 36.02 4.18
10 11 1.446099 GCATCACGTGAAGCTCCGA 60.446 57.895 32.16 5.14 36.02 4.55
11 12 2.792290 CGCATCACGTGAAGCTCCG 61.792 63.158 34.46 20.56 36.69 4.63
12 13 2.456119 CCGCATCACGTGAAGCTCC 61.456 63.158 34.46 13.87 41.42 4.70
13 14 1.738099 ACCGCATCACGTGAAGCTC 60.738 57.895 34.46 18.14 41.42 4.09
14 15 2.029288 CACCGCATCACGTGAAGCT 61.029 57.895 34.46 20.01 41.42 3.74
15 16 2.476051 CACCGCATCACGTGAAGC 59.524 61.111 30.40 30.40 41.42 3.86
16 17 2.476051 GCACCGCATCACGTGAAG 59.524 61.111 24.13 19.87 41.42 3.02
17 18 3.410516 CGCACCGCATCACGTGAA 61.411 61.111 24.13 6.23 41.42 3.18
28 29 4.193334 TCTCCTCATCGCGCACCG 62.193 66.667 8.75 0.00 38.61 4.94
29 30 2.279120 CTCTCCTCATCGCGCACC 60.279 66.667 8.75 0.00 0.00 5.01
30 31 2.279120 CCTCTCCTCATCGCGCAC 60.279 66.667 8.75 0.00 0.00 5.34
31 32 3.531207 CCCTCTCCTCATCGCGCA 61.531 66.667 8.75 0.00 0.00 6.09
32 33 3.206211 CTCCCTCTCCTCATCGCGC 62.206 68.421 0.00 0.00 0.00 6.86
33 34 2.560119 CCTCCCTCTCCTCATCGCG 61.560 68.421 0.00 0.00 0.00 5.87
34 35 0.757188 TTCCTCCCTCTCCTCATCGC 60.757 60.000 0.00 0.00 0.00 4.58
35 36 1.133637 TCTTCCTCCCTCTCCTCATCG 60.134 57.143 0.00 0.00 0.00 3.84
36 37 2.765689 TCTTCCTCCCTCTCCTCATC 57.234 55.000 0.00 0.00 0.00 2.92
37 38 3.051496 TGAATCTTCCTCCCTCTCCTCAT 60.051 47.826 0.00 0.00 0.00 2.90
38 39 2.316067 TGAATCTTCCTCCCTCTCCTCA 59.684 50.000 0.00 0.00 0.00 3.86
39 40 3.039252 TGAATCTTCCTCCCTCTCCTC 57.961 52.381 0.00 0.00 0.00 3.71
40 41 3.209612 AGATGAATCTTCCTCCCTCTCCT 59.790 47.826 0.00 0.00 31.97 3.69
41 42 3.586429 AGATGAATCTTCCTCCCTCTCC 58.414 50.000 0.00 0.00 31.97 3.71
53 54 0.390860 CCGCCTCCGAAGATGAATCT 59.609 55.000 0.00 0.00 39.22 2.40
54 55 0.389391 TCCGCCTCCGAAGATGAATC 59.611 55.000 0.00 0.00 36.29 2.52
55 56 0.830648 TTCCGCCTCCGAAGATGAAT 59.169 50.000 0.00 0.00 36.29 2.57
56 57 0.175760 CTTCCGCCTCCGAAGATGAA 59.824 55.000 0.00 0.00 36.29 2.57
57 58 0.683179 TCTTCCGCCTCCGAAGATGA 60.683 55.000 0.00 0.00 36.29 2.92
58 59 0.175760 TTCTTCCGCCTCCGAAGATG 59.824 55.000 1.40 0.00 33.74 2.90
59 60 1.069358 GATTCTTCCGCCTCCGAAGAT 59.931 52.381 1.40 0.00 33.74 2.40
60 61 0.460311 GATTCTTCCGCCTCCGAAGA 59.540 55.000 0.00 0.00 36.29 2.87
61 62 0.872021 CGATTCTTCCGCCTCCGAAG 60.872 60.000 0.00 0.00 36.29 3.79
62 63 1.141019 CGATTCTTCCGCCTCCGAA 59.859 57.895 0.00 0.00 36.29 4.30
63 64 2.001361 GACGATTCTTCCGCCTCCGA 62.001 60.000 0.00 0.00 36.29 4.55
64 65 1.589196 GACGATTCTTCCGCCTCCG 60.589 63.158 0.00 0.00 0.00 4.63
65 66 0.175989 AAGACGATTCTTCCGCCTCC 59.824 55.000 0.00 0.00 37.55 4.30
66 67 3.742983 AAGACGATTCTTCCGCCTC 57.257 52.632 0.00 0.00 37.55 4.70
79 80 4.033990 TCATTCTCATCTTCGGAAGACG 57.966 45.455 21.86 14.77 41.01 4.18
80 81 4.098654 TCCTCATTCTCATCTTCGGAAGAC 59.901 45.833 21.86 0.00 41.01 3.01
81 82 4.098654 GTCCTCATTCTCATCTTCGGAAGA 59.901 45.833 21.69 21.69 42.69 2.87
82 83 4.367450 GTCCTCATTCTCATCTTCGGAAG 58.633 47.826 11.54 11.54 0.00 3.46
83 84 3.181486 CGTCCTCATTCTCATCTTCGGAA 60.181 47.826 0.00 0.00 0.00 4.30
84 85 2.359214 CGTCCTCATTCTCATCTTCGGA 59.641 50.000 0.00 0.00 0.00 4.55
85 86 2.359214 TCGTCCTCATTCTCATCTTCGG 59.641 50.000 0.00 0.00 0.00 4.30
86 87 3.699779 TCGTCCTCATTCTCATCTTCG 57.300 47.619 0.00 0.00 0.00 3.79
87 88 5.040635 GTCTTCGTCCTCATTCTCATCTTC 58.959 45.833 0.00 0.00 0.00 2.87
88 89 4.439426 CGTCTTCGTCCTCATTCTCATCTT 60.439 45.833 0.00 0.00 0.00 2.40
89 90 3.066064 CGTCTTCGTCCTCATTCTCATCT 59.934 47.826 0.00 0.00 0.00 2.90
90 91 3.065510 TCGTCTTCGTCCTCATTCTCATC 59.934 47.826 0.00 0.00 38.33 2.92
91 92 3.017442 TCGTCTTCGTCCTCATTCTCAT 58.983 45.455 0.00 0.00 38.33 2.90
92 93 2.420372 CTCGTCTTCGTCCTCATTCTCA 59.580 50.000 0.00 0.00 38.33 3.27
93 94 2.223386 CCTCGTCTTCGTCCTCATTCTC 60.223 54.545 0.00 0.00 38.33 2.87
94 95 1.746220 CCTCGTCTTCGTCCTCATTCT 59.254 52.381 0.00 0.00 38.33 2.40
95 96 1.743958 TCCTCGTCTTCGTCCTCATTC 59.256 52.381 0.00 0.00 38.33 2.67
96 97 1.473278 GTCCTCGTCTTCGTCCTCATT 59.527 52.381 0.00 0.00 38.33 2.57
97 98 1.096416 GTCCTCGTCTTCGTCCTCAT 58.904 55.000 0.00 0.00 38.33 2.90
98 99 1.296755 CGTCCTCGTCTTCGTCCTCA 61.297 60.000 0.00 0.00 38.33 3.86
99 100 1.018226 TCGTCCTCGTCTTCGTCCTC 61.018 60.000 0.00 0.00 38.33 3.71
100 101 1.004080 TCGTCCTCGTCTTCGTCCT 60.004 57.895 0.00 0.00 38.33 3.85
101 102 1.424635 CTCGTCCTCGTCTTCGTCC 59.575 63.158 0.00 0.00 38.33 4.79
102 103 1.018226 TCCTCGTCCTCGTCTTCGTC 61.018 60.000 0.00 0.00 38.33 4.20
103 104 0.604780 TTCCTCGTCCTCGTCTTCGT 60.605 55.000 0.00 0.00 38.33 3.85
104 105 0.733729 ATTCCTCGTCCTCGTCTTCG 59.266 55.000 0.00 0.00 38.33 3.79
105 106 1.743958 TCATTCCTCGTCCTCGTCTTC 59.256 52.381 0.00 0.00 38.33 2.87
106 107 1.835494 TCATTCCTCGTCCTCGTCTT 58.165 50.000 0.00 0.00 38.33 3.01
107 108 1.678627 CATCATTCCTCGTCCTCGTCT 59.321 52.381 0.00 0.00 38.33 4.18
108 109 1.405821 ACATCATTCCTCGTCCTCGTC 59.594 52.381 0.00 0.00 38.33 4.20
109 110 1.135139 CACATCATTCCTCGTCCTCGT 59.865 52.381 0.00 0.00 38.33 4.18
110 111 1.135139 ACACATCATTCCTCGTCCTCG 59.865 52.381 0.00 0.00 38.55 4.63
111 112 2.428890 AGACACATCATTCCTCGTCCTC 59.571 50.000 0.00 0.00 0.00 3.71
112 113 2.461695 AGACACATCATTCCTCGTCCT 58.538 47.619 0.00 0.00 0.00 3.85
113 114 2.969628 AGACACATCATTCCTCGTCC 57.030 50.000 0.00 0.00 0.00 4.79
114 115 4.245660 TGAAAGACACATCATTCCTCGTC 58.754 43.478 0.00 0.00 32.62 4.20
115 116 4.271696 TGAAAGACACATCATTCCTCGT 57.728 40.909 0.00 0.00 32.62 4.18
116 117 5.808042 AATGAAAGACACATCATTCCTCG 57.192 39.130 0.00 0.00 41.22 4.63
117 118 6.805271 CACAAATGAAAGACACATCATTCCTC 59.195 38.462 1.88 0.00 43.54 3.71
118 119 6.266103 ACACAAATGAAAGACACATCATTCCT 59.734 34.615 1.88 0.00 43.54 3.36
119 120 6.449698 ACACAAATGAAAGACACATCATTCC 58.550 36.000 1.88 0.00 43.54 3.01
120 121 9.630098 AATACACAAATGAAAGACACATCATTC 57.370 29.630 1.88 0.00 43.54 2.67
121 122 9.414295 CAATACACAAATGAAAGACACATCATT 57.586 29.630 0.00 0.00 45.61 2.57
122 123 8.795513 TCAATACACAAATGAAAGACACATCAT 58.204 29.630 0.00 0.00 37.88 2.45
123 124 8.164058 TCAATACACAAATGAAAGACACATCA 57.836 30.769 0.00 0.00 0.00 3.07
124 125 8.905702 GTTCAATACACAAATGAAAGACACATC 58.094 33.333 0.00 0.00 35.07 3.06
125 126 8.632679 AGTTCAATACACAAATGAAAGACACAT 58.367 29.630 0.00 0.00 35.07 3.21
126 127 7.995289 AGTTCAATACACAAATGAAAGACACA 58.005 30.769 0.00 0.00 35.07 3.72
127 128 8.745837 CAAGTTCAATACACAAATGAAAGACAC 58.254 33.333 0.00 0.00 35.07 3.67
128 129 8.681806 TCAAGTTCAATACACAAATGAAAGACA 58.318 29.630 0.00 0.00 35.07 3.41
129 130 9.683069 ATCAAGTTCAATACACAAATGAAAGAC 57.317 29.630 0.00 0.00 35.07 3.01
133 134 8.763356 GCAAATCAAGTTCAATACACAAATGAA 58.237 29.630 0.00 0.00 0.00 2.57
134 135 7.924947 TGCAAATCAAGTTCAATACACAAATGA 59.075 29.630 0.00 0.00 0.00 2.57
135 136 8.074474 TGCAAATCAAGTTCAATACACAAATG 57.926 30.769 0.00 0.00 0.00 2.32
136 137 8.836268 ATGCAAATCAAGTTCAATACACAAAT 57.164 26.923 0.00 0.00 0.00 2.32
137 138 8.659925 AATGCAAATCAAGTTCAATACACAAA 57.340 26.923 0.00 0.00 0.00 2.83
138 139 8.659925 AAATGCAAATCAAGTTCAATACACAA 57.340 26.923 0.00 0.00 0.00 3.33
139 140 8.549548 CAAAATGCAAATCAAGTTCAATACACA 58.450 29.630 0.00 0.00 0.00 3.72
140 141 8.763356 TCAAAATGCAAATCAAGTTCAATACAC 58.237 29.630 0.00 0.00 0.00 2.90
141 142 8.883954 TCAAAATGCAAATCAAGTTCAATACA 57.116 26.923 0.00 0.00 0.00 2.29
142 143 9.584839 GTTCAAAATGCAAATCAAGTTCAATAC 57.415 29.630 0.00 0.00 0.00 1.89
143 144 9.545105 AGTTCAAAATGCAAATCAAGTTCAATA 57.455 25.926 0.00 0.00 0.00 1.90
144 145 8.441312 AGTTCAAAATGCAAATCAAGTTCAAT 57.559 26.923 0.00 0.00 0.00 2.57
145 146 7.846644 AGTTCAAAATGCAAATCAAGTTCAA 57.153 28.000 0.00 0.00 0.00 2.69
146 147 7.201626 CCAAGTTCAAAATGCAAATCAAGTTCA 60.202 33.333 0.00 0.00 0.00 3.18
147 148 7.127686 CCAAGTTCAAAATGCAAATCAAGTTC 58.872 34.615 0.00 0.00 0.00 3.01
148 149 6.598850 ACCAAGTTCAAAATGCAAATCAAGTT 59.401 30.769 0.00 0.00 0.00 2.66
149 150 6.114767 ACCAAGTTCAAAATGCAAATCAAGT 58.885 32.000 0.00 0.00 0.00 3.16
150 151 6.607735 ACCAAGTTCAAAATGCAAATCAAG 57.392 33.333 0.00 0.00 0.00 3.02
151 152 6.183360 CCAACCAAGTTCAAAATGCAAATCAA 60.183 34.615 0.00 0.00 0.00 2.57
152 153 5.296283 CCAACCAAGTTCAAAATGCAAATCA 59.704 36.000 0.00 0.00 0.00 2.57
153 154 5.526846 TCCAACCAAGTTCAAAATGCAAATC 59.473 36.000 0.00 0.00 0.00 2.17
154 155 5.435291 TCCAACCAAGTTCAAAATGCAAAT 58.565 33.333 0.00 0.00 0.00 2.32
155 156 4.836825 TCCAACCAAGTTCAAAATGCAAA 58.163 34.783 0.00 0.00 0.00 3.68
156 157 4.478206 TCCAACCAAGTTCAAAATGCAA 57.522 36.364 0.00 0.00 0.00 4.08
157 158 4.100653 TCATCCAACCAAGTTCAAAATGCA 59.899 37.500 0.00 0.00 0.00 3.96
158 159 4.630111 TCATCCAACCAAGTTCAAAATGC 58.370 39.130 0.00 0.00 0.00 3.56
159 160 6.282930 AGTTCATCCAACCAAGTTCAAAATG 58.717 36.000 0.00 0.00 35.28 2.32
160 161 6.484364 AGTTCATCCAACCAAGTTCAAAAT 57.516 33.333 0.00 0.00 35.28 1.82
161 162 5.930837 AGTTCATCCAACCAAGTTCAAAA 57.069 34.783 0.00 0.00 35.28 2.44
162 163 5.186797 ACAAGTTCATCCAACCAAGTTCAAA 59.813 36.000 0.00 0.00 35.28 2.69
163 164 4.709397 ACAAGTTCATCCAACCAAGTTCAA 59.291 37.500 0.00 0.00 35.28 2.69
164 165 4.097741 CACAAGTTCATCCAACCAAGTTCA 59.902 41.667 0.00 0.00 35.28 3.18
165 166 4.499696 CCACAAGTTCATCCAACCAAGTTC 60.500 45.833 0.00 0.00 35.28 3.01
166 167 3.384467 CCACAAGTTCATCCAACCAAGTT 59.616 43.478 0.00 0.00 35.28 2.66
167 168 2.958355 CCACAAGTTCATCCAACCAAGT 59.042 45.455 0.00 0.00 35.28 3.16
168 169 2.297033 CCCACAAGTTCATCCAACCAAG 59.703 50.000 0.00 0.00 35.28 3.61
169 170 2.315176 CCCACAAGTTCATCCAACCAA 58.685 47.619 0.00 0.00 35.28 3.67
170 171 1.993956 CCCACAAGTTCATCCAACCA 58.006 50.000 0.00 0.00 35.28 3.67
171 172 0.603065 GCCCACAAGTTCATCCAACC 59.397 55.000 0.00 0.00 35.28 3.77
172 173 1.327303 TGCCCACAAGTTCATCCAAC 58.673 50.000 0.00 0.00 34.86 3.77
173 174 1.894466 CATGCCCACAAGTTCATCCAA 59.106 47.619 0.00 0.00 0.00 3.53
174 175 1.075212 TCATGCCCACAAGTTCATCCA 59.925 47.619 0.00 0.00 0.00 3.41
175 176 1.838112 TCATGCCCACAAGTTCATCC 58.162 50.000 0.00 0.00 0.00 3.51
176 177 4.460948 AAATCATGCCCACAAGTTCATC 57.539 40.909 0.00 0.00 0.00 2.92
177 178 4.283978 TCAAAATCATGCCCACAAGTTCAT 59.716 37.500 0.00 0.00 0.00 2.57
178 179 3.640498 TCAAAATCATGCCCACAAGTTCA 59.360 39.130 0.00 0.00 0.00 3.18
179 180 4.255833 TCAAAATCATGCCCACAAGTTC 57.744 40.909 0.00 0.00 0.00 3.01
180 181 4.101430 AGTTCAAAATCATGCCCACAAGTT 59.899 37.500 0.00 0.00 0.00 2.66
181 182 3.642848 AGTTCAAAATCATGCCCACAAGT 59.357 39.130 0.00 0.00 0.00 3.16
182 183 4.261578 AGTTCAAAATCATGCCCACAAG 57.738 40.909 0.00 0.00 0.00 3.16
183 184 4.141756 ACAAGTTCAAAATCATGCCCACAA 60.142 37.500 0.00 0.00 0.00 3.33
184 185 3.387374 ACAAGTTCAAAATCATGCCCACA 59.613 39.130 0.00 0.00 0.00 4.17
185 186 3.742369 CACAAGTTCAAAATCATGCCCAC 59.258 43.478 0.00 0.00 0.00 4.61
186 187 3.244146 CCACAAGTTCAAAATCATGCCCA 60.244 43.478 0.00 0.00 0.00 5.36
187 188 3.328505 CCACAAGTTCAAAATCATGCCC 58.671 45.455 0.00 0.00 0.00 5.36
188 189 3.328505 CCCACAAGTTCAAAATCATGCC 58.671 45.455 0.00 0.00 0.00 4.40
189 190 2.738314 GCCCACAAGTTCAAAATCATGC 59.262 45.455 0.00 0.00 0.00 4.06
190 191 3.992643 TGCCCACAAGTTCAAAATCATG 58.007 40.909 0.00 0.00 0.00 3.07
191 192 4.283978 TCATGCCCACAAGTTCAAAATCAT 59.716 37.500 0.00 0.00 0.00 2.45
192 193 3.640498 TCATGCCCACAAGTTCAAAATCA 59.360 39.130 0.00 0.00 0.00 2.57
193 194 4.255833 TCATGCCCACAAGTTCAAAATC 57.744 40.909 0.00 0.00 0.00 2.17
194 195 4.101430 AGTTCATGCCCACAAGTTCAAAAT 59.899 37.500 0.00 0.00 0.00 1.82
195 196 3.450457 AGTTCATGCCCACAAGTTCAAAA 59.550 39.130 0.00 0.00 0.00 2.44
196 197 3.030291 AGTTCATGCCCACAAGTTCAAA 58.970 40.909 0.00 0.00 0.00 2.69
197 198 2.665165 AGTTCATGCCCACAAGTTCAA 58.335 42.857 0.00 0.00 0.00 2.69
198 199 2.363306 AGTTCATGCCCACAAGTTCA 57.637 45.000 0.00 0.00 0.00 3.18
199 200 3.733443 AAAGTTCATGCCCACAAGTTC 57.267 42.857 0.00 0.00 0.00 3.01
200 201 3.706086 AGAAAAGTTCATGCCCACAAGTT 59.294 39.130 0.00 0.00 0.00 2.66
201 202 3.299503 AGAAAAGTTCATGCCCACAAGT 58.700 40.909 0.00 0.00 0.00 3.16
202 203 4.202141 TGAAGAAAAGTTCATGCCCACAAG 60.202 41.667 0.00 0.00 31.31 3.16
203 204 3.703556 TGAAGAAAAGTTCATGCCCACAA 59.296 39.130 0.00 0.00 31.31 3.33
204 205 3.295093 TGAAGAAAAGTTCATGCCCACA 58.705 40.909 0.00 0.00 31.31 4.17
205 206 4.022068 TGATGAAGAAAAGTTCATGCCCAC 60.022 41.667 3.87 0.00 45.32 4.61
206 207 4.151121 TGATGAAGAAAAGTTCATGCCCA 58.849 39.130 3.87 0.00 45.32 5.36
207 208 4.789012 TGATGAAGAAAAGTTCATGCCC 57.211 40.909 3.87 0.00 45.32 5.36
208 209 5.776744 AGTTGATGAAGAAAAGTTCATGCC 58.223 37.500 3.87 0.00 45.32 4.40
209 210 6.698766 ACAAGTTGATGAAGAAAAGTTCATGC 59.301 34.615 10.54 0.00 45.32 4.06
210 211 8.638685 AACAAGTTGATGAAGAAAAGTTCATG 57.361 30.769 10.54 0.00 45.32 3.07
212 213 8.087750 ACAAACAAGTTGATGAAGAAAAGTTCA 58.912 29.630 10.54 0.00 39.87 3.18
213 214 8.375465 CACAAACAAGTTGATGAAGAAAAGTTC 58.625 33.333 10.54 0.00 39.87 3.01
214 215 7.872483 ACACAAACAAGTTGATGAAGAAAAGTT 59.128 29.630 10.54 0.00 39.87 2.66
215 216 7.329226 CACACAAACAAGTTGATGAAGAAAAGT 59.671 33.333 10.54 0.33 39.87 2.66
216 217 7.541783 TCACACAAACAAGTTGATGAAGAAAAG 59.458 33.333 10.54 0.00 39.87 2.27
217 218 7.374272 TCACACAAACAAGTTGATGAAGAAAA 58.626 30.769 10.54 0.00 39.87 2.29
218 219 6.918626 TCACACAAACAAGTTGATGAAGAAA 58.081 32.000 10.54 0.08 39.87 2.52
219 220 6.507958 TCACACAAACAAGTTGATGAAGAA 57.492 33.333 10.54 0.00 39.87 2.52
220 221 6.507958 TTCACACAAACAAGTTGATGAAGA 57.492 33.333 10.54 6.52 39.14 2.87
221 222 7.760131 ATTTCACACAAACAAGTTGATGAAG 57.240 32.000 10.54 8.85 41.97 3.02
222 223 8.545229 AAATTTCACACAAACAAGTTGATGAA 57.455 26.923 10.54 6.61 40.69 2.57
223 224 8.545229 AAAATTTCACACAAACAAGTTGATGA 57.455 26.923 10.54 0.84 39.87 2.92
249 250 9.607988 ATTCAAAATGCAATGAACATGACATAT 57.392 25.926 13.17 0.00 38.29 1.78
250 251 8.874816 CATTCAAAATGCAATGAACATGACATA 58.125 29.630 13.17 0.00 38.29 2.29
251 252 7.389330 ACATTCAAAATGCAATGAACATGACAT 59.611 29.630 13.17 1.80 38.29 3.06
252 253 6.706716 ACATTCAAAATGCAATGAACATGACA 59.293 30.769 13.17 0.00 38.29 3.58
253 254 7.124347 ACATTCAAAATGCAATGAACATGAC 57.876 32.000 13.17 0.00 38.29 3.06
254 255 7.441458 TGAACATTCAAAATGCAATGAACATGA 59.559 29.630 13.17 0.00 38.29 3.07
255 256 7.577107 TGAACATTCAAAATGCAATGAACATG 58.423 30.769 13.17 11.46 38.29 3.21
256 257 7.731882 TGAACATTCAAAATGCAATGAACAT 57.268 28.000 13.17 4.46 38.29 2.71
257 258 7.549615 TTGAACATTCAAAATGCAATGAACA 57.450 28.000 13.17 6.27 43.62 3.18
270 271 8.545229 AACACAAAATGAAGTTGAACATTCAA 57.455 26.923 11.98 2.89 44.31 2.69
271 272 7.816513 TGAACACAAAATGAAGTTGAACATTCA 59.183 29.630 10.87 10.87 39.59 2.57
272 273 8.183830 TGAACACAAAATGAAGTTGAACATTC 57.816 30.769 0.00 0.00 35.99 2.67
273 274 8.545229 TTGAACACAAAATGAAGTTGAACATT 57.455 26.923 0.00 0.00 38.18 2.71
274 275 8.545229 TTTGAACACAAAATGAAGTTGAACAT 57.455 26.923 0.00 0.00 31.76 2.71
275 276 7.953158 TTTGAACACAAAATGAAGTTGAACA 57.047 28.000 0.00 0.00 31.76 3.18
287 288 7.605309 TGCATATATGGCATTTTGAACACAAAA 59.395 29.630 14.51 9.87 44.08 2.44
288 289 7.101700 TGCATATATGGCATTTTGAACACAAA 58.898 30.769 14.51 0.00 36.11 2.83
289 290 6.637657 TGCATATATGGCATTTTGAACACAA 58.362 32.000 14.51 0.00 36.11 3.33
290 291 6.218108 TGCATATATGGCATTTTGAACACA 57.782 33.333 14.51 0.00 36.11 3.72
291 292 7.569297 CATTGCATATATGGCATTTTGAACAC 58.431 34.615 14.51 0.00 41.58 3.32
292 293 6.203145 GCATTGCATATATGGCATTTTGAACA 59.797 34.615 14.51 0.00 41.58 3.18
293 294 6.347888 GGCATTGCATATATGGCATTTTGAAC 60.348 38.462 16.20 0.00 45.09 3.18
294 295 5.701750 GGCATTGCATATATGGCATTTTGAA 59.298 36.000 16.20 0.00 45.09 2.69
295 296 5.239351 GGCATTGCATATATGGCATTTTGA 58.761 37.500 16.20 0.00 45.09 2.69
296 297 4.393680 GGGCATTGCATATATGGCATTTTG 59.606 41.667 20.93 2.41 46.89 2.44
297 298 4.566070 GGGGCATTGCATATATGGCATTTT 60.566 41.667 20.93 0.00 46.89 1.82
298 299 3.054948 GGGGCATTGCATATATGGCATTT 60.055 43.478 20.93 0.00 46.89 2.32
299 300 2.502538 GGGGCATTGCATATATGGCATT 59.497 45.455 20.93 6.75 46.89 3.56
300 301 2.112998 GGGGCATTGCATATATGGCAT 58.887 47.619 20.93 4.88 46.89 4.40
301 302 1.559368 GGGGCATTGCATATATGGCA 58.441 50.000 20.93 9.77 46.89 4.92
302 303 0.457035 CGGGGCATTGCATATATGGC 59.543 55.000 14.51 13.51 45.03 4.40
303 304 1.105457 CCGGGGCATTGCATATATGG 58.895 55.000 14.51 0.00 0.00 2.74
304 305 0.457035 GCCGGGGCATTGCATATATG 59.543 55.000 11.39 8.45 41.49 1.78
305 306 1.031571 CGCCGGGGCATTGCATATAT 61.032 55.000 11.39 0.00 42.06 0.86
306 307 1.673993 CGCCGGGGCATTGCATATA 60.674 57.895 11.39 0.00 42.06 0.86
307 308 2.985282 CGCCGGGGCATTGCATAT 60.985 61.111 11.39 0.00 42.06 1.78
308 309 4.182433 TCGCCGGGGCATTGCATA 62.182 61.111 14.85 0.00 42.06 3.14
342 343 1.866237 CTCCAGCAGCGCGTAAAAA 59.134 52.632 8.43 0.00 0.00 1.94
343 344 2.677003 GCTCCAGCAGCGCGTAAAA 61.677 57.895 8.43 0.00 38.76 1.52
344 345 3.118454 GCTCCAGCAGCGCGTAAA 61.118 61.111 8.43 0.00 38.76 2.01
365 366 3.307262 CTAAAATGCAGCGCGCGC 61.307 61.111 45.10 45.10 46.97 6.86
366 367 3.307262 GCTAAAATGCAGCGCGCG 61.307 61.111 28.44 28.44 46.97 6.86
371 372 2.951227 GCCGCGCTAAAATGCAGC 60.951 61.111 5.56 0.00 35.61 5.25
372 373 1.584483 CAGCCGCGCTAAAATGCAG 60.584 57.895 5.56 0.00 36.40 4.41
373 374 2.484662 CAGCCGCGCTAAAATGCA 59.515 55.556 5.56 0.00 36.40 3.96
374 375 2.951227 GCAGCCGCGCTAAAATGC 60.951 61.111 5.56 4.97 36.40 3.56
375 376 1.584483 CAGCAGCCGCGCTAAAATG 60.584 57.895 5.56 0.00 45.49 2.32
376 377 2.764314 CCAGCAGCCGCGCTAAAAT 61.764 57.895 5.56 0.00 45.49 1.82
377 378 3.430862 CCAGCAGCCGCGCTAAAA 61.431 61.111 5.56 0.00 45.49 1.52
378 379 4.386951 TCCAGCAGCCGCGCTAAA 62.387 61.111 5.56 0.00 45.49 1.85
379 380 4.819761 CTCCAGCAGCCGCGCTAA 62.820 66.667 5.56 1.87 45.49 3.09
415 416 3.451894 GCCCATCGCCTGGTTTGG 61.452 66.667 0.00 0.14 44.30 3.28
416 417 3.814268 CGCCCATCGCCTGGTTTG 61.814 66.667 0.00 0.00 44.30 2.93
440 441 1.766143 CTCTAACAGGCGCCGAATGC 61.766 60.000 23.20 0.00 0.00 3.56
441 442 0.179111 TCTCTAACAGGCGCCGAATG 60.179 55.000 23.20 17.17 0.00 2.67
442 443 0.753262 ATCTCTAACAGGCGCCGAAT 59.247 50.000 23.20 13.56 0.00 3.34
443 444 0.179111 CATCTCTAACAGGCGCCGAA 60.179 55.000 23.20 6.85 0.00 4.30
444 445 1.437573 CATCTCTAACAGGCGCCGA 59.562 57.895 23.20 10.93 0.00 5.54
445 446 2.240500 GCATCTCTAACAGGCGCCG 61.241 63.158 23.20 18.60 0.00 6.46
446 447 0.878086 GAGCATCTCTAACAGGCGCC 60.878 60.000 21.89 21.89 0.00 6.53
447 448 2.599216 GAGCATCTCTAACAGGCGC 58.401 57.895 0.00 0.00 0.00 6.53
459 460 3.242870 CGTTTTGAGGCCATAAGAGCATC 60.243 47.826 5.01 0.00 41.27 3.91
460 461 2.684881 CGTTTTGAGGCCATAAGAGCAT 59.315 45.455 5.01 0.00 0.00 3.79
461 462 2.083774 CGTTTTGAGGCCATAAGAGCA 58.916 47.619 5.01 0.00 0.00 4.26
462 463 2.084546 ACGTTTTGAGGCCATAAGAGC 58.915 47.619 5.01 0.00 0.00 4.09
463 464 4.669197 CGAAACGTTTTGAGGCCATAAGAG 60.669 45.833 21.52 0.00 0.00 2.85
464 465 3.187637 CGAAACGTTTTGAGGCCATAAGA 59.812 43.478 21.52 0.00 0.00 2.10
465 466 3.488489 CGAAACGTTTTGAGGCCATAAG 58.512 45.455 21.52 0.00 0.00 1.73
466 467 2.350964 GCGAAACGTTTTGAGGCCATAA 60.351 45.455 28.52 0.00 0.00 1.90
467 468 1.198178 GCGAAACGTTTTGAGGCCATA 59.802 47.619 28.52 0.00 0.00 2.74
468 469 0.039527 GCGAAACGTTTTGAGGCCAT 60.040 50.000 28.52 0.00 0.00 4.40
469 470 1.357334 GCGAAACGTTTTGAGGCCA 59.643 52.632 28.52 0.00 0.00 5.36
470 471 0.660300 CTGCGAAACGTTTTGAGGCC 60.660 55.000 28.52 13.19 0.00 5.19
471 472 1.268778 GCTGCGAAACGTTTTGAGGC 61.269 55.000 28.52 24.39 0.00 4.70
472 473 0.028770 TGCTGCGAAACGTTTTGAGG 59.971 50.000 28.52 19.95 0.00 3.86
473 474 1.268032 ACTGCTGCGAAACGTTTTGAG 60.268 47.619 28.52 21.75 0.00 3.02
474 475 0.730265 ACTGCTGCGAAACGTTTTGA 59.270 45.000 28.52 14.21 0.00 2.69
475 476 1.544686 AACTGCTGCGAAACGTTTTG 58.455 45.000 21.69 21.69 0.00 2.44
476 477 2.182014 GAAACTGCTGCGAAACGTTTT 58.818 42.857 15.89 0.00 0.00 2.43
477 478 1.131504 TGAAACTGCTGCGAAACGTTT 59.868 42.857 14.57 14.57 0.00 3.60
478 479 0.730265 TGAAACTGCTGCGAAACGTT 59.270 45.000 0.00 0.00 0.00 3.99
479 480 0.027586 GTGAAACTGCTGCGAAACGT 59.972 50.000 0.00 0.00 0.00 3.99
480 481 0.027455 TGTGAAACTGCTGCGAAACG 59.973 50.000 0.00 0.00 38.04 3.60
481 482 1.330521 TCTGTGAAACTGCTGCGAAAC 59.669 47.619 0.00 0.00 38.04 2.78
482 483 1.662517 TCTGTGAAACTGCTGCGAAA 58.337 45.000 0.00 0.00 38.04 3.46
483 484 1.662517 TTCTGTGAAACTGCTGCGAA 58.337 45.000 0.00 0.00 38.04 4.70
484 485 1.662517 TTTCTGTGAAACTGCTGCGA 58.337 45.000 0.00 0.00 38.04 5.10
485 486 2.111756 GTTTTCTGTGAAACTGCTGCG 58.888 47.619 0.00 0.00 38.04 5.18
486 487 3.427161 AGTTTTCTGTGAAACTGCTGC 57.573 42.857 9.80 0.00 45.46 5.25
487 488 6.728200 TCAATAGTTTTCTGTGAAACTGCTG 58.272 36.000 16.43 13.71 46.33 4.41
488 489 6.942532 TCAATAGTTTTCTGTGAAACTGCT 57.057 33.333 16.43 4.16 46.33 4.24
489 490 8.579682 AATTCAATAGTTTTCTGTGAAACTGC 57.420 30.769 16.43 0.00 46.33 4.40
492 493 9.113876 CGGTAATTCAATAGTTTTCTGTGAAAC 57.886 33.333 0.00 0.00 38.14 2.78
493 494 7.806014 GCGGTAATTCAATAGTTTTCTGTGAAA 59.194 33.333 0.00 0.00 38.14 2.69
494 495 7.041030 TGCGGTAATTCAATAGTTTTCTGTGAA 60.041 33.333 0.00 0.00 38.60 3.18
495 496 6.428465 TGCGGTAATTCAATAGTTTTCTGTGA 59.572 34.615 0.00 0.00 0.00 3.58
496 497 6.607689 TGCGGTAATTCAATAGTTTTCTGTG 58.392 36.000 0.00 0.00 0.00 3.66
497 498 6.811253 TGCGGTAATTCAATAGTTTTCTGT 57.189 33.333 0.00 0.00 0.00 3.41
498 499 7.526608 TCTTGCGGTAATTCAATAGTTTTCTG 58.473 34.615 0.00 0.00 0.00 3.02
499 500 7.681939 TCTTGCGGTAATTCAATAGTTTTCT 57.318 32.000 0.00 0.00 0.00 2.52
500 501 7.806014 TGTTCTTGCGGTAATTCAATAGTTTTC 59.194 33.333 0.00 0.00 0.00 2.29
501 502 7.653647 TGTTCTTGCGGTAATTCAATAGTTTT 58.346 30.769 0.00 0.00 0.00 2.43
502 503 7.209471 TGTTCTTGCGGTAATTCAATAGTTT 57.791 32.000 0.00 0.00 0.00 2.66
503 504 6.128007 CCTGTTCTTGCGGTAATTCAATAGTT 60.128 38.462 0.00 0.00 0.00 2.24
504 505 5.354234 CCTGTTCTTGCGGTAATTCAATAGT 59.646 40.000 0.00 0.00 0.00 2.12
505 506 5.220854 CCCTGTTCTTGCGGTAATTCAATAG 60.221 44.000 0.00 0.00 0.00 1.73
506 507 4.638421 CCCTGTTCTTGCGGTAATTCAATA 59.362 41.667 0.00 0.00 0.00 1.90
507 508 3.443681 CCCTGTTCTTGCGGTAATTCAAT 59.556 43.478 0.00 0.00 0.00 2.57
508 509 2.817258 CCCTGTTCTTGCGGTAATTCAA 59.183 45.455 0.00 0.00 0.00 2.69
509 510 2.039216 TCCCTGTTCTTGCGGTAATTCA 59.961 45.455 0.00 0.00 0.00 2.57
510 511 2.706890 TCCCTGTTCTTGCGGTAATTC 58.293 47.619 0.00 0.00 0.00 2.17
511 512 2.871096 TCCCTGTTCTTGCGGTAATT 57.129 45.000 0.00 0.00 0.00 1.40
512 513 2.871096 TTCCCTGTTCTTGCGGTAAT 57.129 45.000 0.00 0.00 0.00 1.89
513 514 2.642154 TTTCCCTGTTCTTGCGGTAA 57.358 45.000 0.00 0.00 0.00 2.85
514 515 2.500229 CTTTTCCCTGTTCTTGCGGTA 58.500 47.619 0.00 0.00 0.00 4.02
515 516 1.318576 CTTTTCCCTGTTCTTGCGGT 58.681 50.000 0.00 0.00 0.00 5.68
516 517 0.598065 CCTTTTCCCTGTTCTTGCGG 59.402 55.000 0.00 0.00 0.00 5.69
517 518 1.604604 TCCTTTTCCCTGTTCTTGCG 58.395 50.000 0.00 0.00 0.00 4.85
518 519 4.082190 GGTTATCCTTTTCCCTGTTCTTGC 60.082 45.833 0.00 0.00 0.00 4.01
519 520 4.462834 GGGTTATCCTTTTCCCTGTTCTTG 59.537 45.833 0.00 0.00 37.18 3.02
520 521 4.673968 GGGTTATCCTTTTCCCTGTTCTT 58.326 43.478 0.00 0.00 37.18 2.52
521 522 3.308188 CGGGTTATCCTTTTCCCTGTTCT 60.308 47.826 0.00 0.00 37.92 3.01
522 523 3.014623 CGGGTTATCCTTTTCCCTGTTC 58.985 50.000 0.00 0.00 37.92 3.18
523 524 2.882643 GCGGGTTATCCTTTTCCCTGTT 60.883 50.000 0.00 0.00 37.92 3.16
524 525 1.340697 GCGGGTTATCCTTTTCCCTGT 60.341 52.381 0.00 0.00 37.92 4.00
525 526 1.389555 GCGGGTTATCCTTTTCCCTG 58.610 55.000 0.00 0.00 37.92 4.45
526 527 0.257905 GGCGGGTTATCCTTTTCCCT 59.742 55.000 0.00 0.00 37.92 4.20
527 528 0.257905 AGGCGGGTTATCCTTTTCCC 59.742 55.000 0.00 0.00 36.82 3.97
528 529 2.139323 AAGGCGGGTTATCCTTTTCC 57.861 50.000 0.00 0.00 39.53 3.13
532 533 2.823747 GTTTGAAAGGCGGGTTATCCTT 59.176 45.455 0.00 0.00 44.07 3.36
533 534 2.224917 TGTTTGAAAGGCGGGTTATCCT 60.225 45.455 0.00 0.00 0.00 3.24
534 535 2.163613 CTGTTTGAAAGGCGGGTTATCC 59.836 50.000 0.00 0.00 0.00 2.59
535 536 2.163613 CCTGTTTGAAAGGCGGGTTATC 59.836 50.000 0.00 0.00 0.00 1.75
536 537 2.167662 CCTGTTTGAAAGGCGGGTTAT 58.832 47.619 0.00 0.00 0.00 1.89
537 538 1.611519 CCTGTTTGAAAGGCGGGTTA 58.388 50.000 0.00 0.00 0.00 2.85
538 539 1.112916 CCCTGTTTGAAAGGCGGGTT 61.113 55.000 0.00 0.00 33.07 4.11
539 540 1.530655 CCCTGTTTGAAAGGCGGGT 60.531 57.895 0.00 0.00 33.07 5.28
540 541 2.275380 CCCCTGTTTGAAAGGCGGG 61.275 63.158 0.00 0.00 33.07 6.13
541 542 2.931068 GCCCCTGTTTGAAAGGCGG 61.931 63.158 0.00 0.00 33.18 6.13
542 543 2.650778 GCCCCTGTTTGAAAGGCG 59.349 61.111 0.00 0.00 33.18 5.52
543 544 0.033920 CAAGCCCCTGTTTGAAAGGC 59.966 55.000 0.00 0.00 44.20 4.35
544 545 1.615392 CTCAAGCCCCTGTTTGAAAGG 59.385 52.381 0.00 0.00 40.56 3.11
545 546 2.586425 TCTCAAGCCCCTGTTTGAAAG 58.414 47.619 0.00 0.00 40.56 2.62
546 547 2.746279 TCTCAAGCCCCTGTTTGAAA 57.254 45.000 0.00 0.00 40.56 2.69
547 548 2.108075 TCATCTCAAGCCCCTGTTTGAA 59.892 45.455 0.00 0.00 40.56 2.69
548 549 1.704628 TCATCTCAAGCCCCTGTTTGA 59.295 47.619 0.00 0.00 39.09 2.69
549 550 2.205022 TCATCTCAAGCCCCTGTTTG 57.795 50.000 0.00 0.00 34.33 2.93
550 551 2.978156 TTCATCTCAAGCCCCTGTTT 57.022 45.000 0.00 0.00 0.00 2.83
551 552 2.376518 TCTTTCATCTCAAGCCCCTGTT 59.623 45.455 0.00 0.00 0.00 3.16
552 553 1.988107 TCTTTCATCTCAAGCCCCTGT 59.012 47.619 0.00 0.00 0.00 4.00
553 554 2.795231 TCTTTCATCTCAAGCCCCTG 57.205 50.000 0.00 0.00 0.00 4.45
554 555 3.814504 TTTCTTTCATCTCAAGCCCCT 57.185 42.857 0.00 0.00 0.00 4.79
555 556 4.871933 TTTTTCTTTCATCTCAAGCCCC 57.128 40.909 0.00 0.00 0.00 5.80
573 574 1.970640 GGACCTCCTGCCAACATTTTT 59.029 47.619 0.00 0.00 0.00 1.94
574 575 1.147817 AGGACCTCCTGCCAACATTTT 59.852 47.619 0.00 0.00 46.55 1.82
575 576 0.779997 AGGACCTCCTGCCAACATTT 59.220 50.000 0.00 0.00 46.55 2.32
576 577 2.479562 AGGACCTCCTGCCAACATT 58.520 52.632 0.00 0.00 46.55 2.71
577 578 4.257890 AGGACCTCCTGCCAACAT 57.742 55.556 0.00 0.00 46.55 2.71
586 587 5.359194 TGTAAGATGATTGAAGGACCTCC 57.641 43.478 0.00 0.00 0.00 4.30
587 588 7.957002 TCTATGTAAGATGATTGAAGGACCTC 58.043 38.462 0.00 0.00 0.00 3.85
588 589 7.016072 CCTCTATGTAAGATGATTGAAGGACCT 59.984 40.741 0.00 0.00 32.41 3.85
589 590 7.015682 TCCTCTATGTAAGATGATTGAAGGACC 59.984 40.741 0.00 0.00 32.41 4.46
590 591 7.957002 TCCTCTATGTAAGATGATTGAAGGAC 58.043 38.462 0.00 0.00 32.41 3.85
591 592 7.234371 CCTCCTCTATGTAAGATGATTGAAGGA 59.766 40.741 0.00 0.00 32.41 3.36
592 593 7.234371 TCCTCCTCTATGTAAGATGATTGAAGG 59.766 40.741 0.00 0.00 32.41 3.46
593 594 8.187913 TCCTCCTCTATGTAAGATGATTGAAG 57.812 38.462 0.00 0.00 32.41 3.02
594 595 8.553085 TTCCTCCTCTATGTAAGATGATTGAA 57.447 34.615 0.00 0.00 32.41 2.69
595 596 8.553085 TTTCCTCCTCTATGTAAGATGATTGA 57.447 34.615 0.00 0.00 32.41 2.57
598 599 9.607333 TGTATTTCCTCCTCTATGTAAGATGAT 57.393 33.333 0.00 0.00 32.41 2.45
599 600 9.083422 CTGTATTTCCTCCTCTATGTAAGATGA 57.917 37.037 0.00 0.00 32.41 2.92
600 601 7.816995 GCTGTATTTCCTCCTCTATGTAAGATG 59.183 40.741 0.00 0.00 32.41 2.90
601 602 7.732593 AGCTGTATTTCCTCCTCTATGTAAGAT 59.267 37.037 0.00 0.00 32.41 2.40
602 603 7.069986 AGCTGTATTTCCTCCTCTATGTAAGA 58.930 38.462 0.00 0.00 0.00 2.10
603 604 7.296628 AGCTGTATTTCCTCCTCTATGTAAG 57.703 40.000 0.00 0.00 0.00 2.34
604 605 8.777578 TTAGCTGTATTTCCTCCTCTATGTAA 57.222 34.615 0.00 0.00 0.00 2.41
605 606 7.039644 GCTTAGCTGTATTTCCTCCTCTATGTA 60.040 40.741 0.00 0.00 0.00 2.29
606 607 6.239458 GCTTAGCTGTATTTCCTCCTCTATGT 60.239 42.308 0.00 0.00 0.00 2.29
607 608 6.162777 GCTTAGCTGTATTTCCTCCTCTATG 58.837 44.000 0.00 0.00 0.00 2.23
608 609 5.841237 TGCTTAGCTGTATTTCCTCCTCTAT 59.159 40.000 5.60 0.00 0.00 1.98
609 610 5.069251 GTGCTTAGCTGTATTTCCTCCTCTA 59.931 44.000 5.60 0.00 0.00 2.43
610 611 4.033709 TGCTTAGCTGTATTTCCTCCTCT 58.966 43.478 5.60 0.00 0.00 3.69
611 612 4.123506 GTGCTTAGCTGTATTTCCTCCTC 58.876 47.826 5.60 0.00 0.00 3.71
612 613 3.519510 TGTGCTTAGCTGTATTTCCTCCT 59.480 43.478 5.60 0.00 0.00 3.69
613 614 3.873910 TGTGCTTAGCTGTATTTCCTCC 58.126 45.455 5.60 0.00 0.00 4.30
614 615 3.873952 CCTGTGCTTAGCTGTATTTCCTC 59.126 47.826 5.60 0.00 0.00 3.71
615 616 3.264450 ACCTGTGCTTAGCTGTATTTCCT 59.736 43.478 5.60 0.00 0.00 3.36
616 617 3.375299 CACCTGTGCTTAGCTGTATTTCC 59.625 47.826 5.60 0.00 0.00 3.13
617 618 4.253685 TCACCTGTGCTTAGCTGTATTTC 58.746 43.478 5.60 0.00 0.00 2.17
618 619 4.286297 TCACCTGTGCTTAGCTGTATTT 57.714 40.909 5.60 0.00 0.00 1.40
619 620 3.981071 TCACCTGTGCTTAGCTGTATT 57.019 42.857 5.60 0.00 0.00 1.89
620 621 3.708631 AGATCACCTGTGCTTAGCTGTAT 59.291 43.478 5.60 0.00 0.00 2.29
621 622 3.099905 AGATCACCTGTGCTTAGCTGTA 58.900 45.455 5.60 0.00 0.00 2.74
622 623 1.905215 AGATCACCTGTGCTTAGCTGT 59.095 47.619 5.60 0.00 0.00 4.40
623 624 2.168106 AGAGATCACCTGTGCTTAGCTG 59.832 50.000 5.60 0.00 0.00 4.24
624 625 2.465813 AGAGATCACCTGTGCTTAGCT 58.534 47.619 5.60 0.00 0.00 3.32
625 626 2.977772 AGAGATCACCTGTGCTTAGC 57.022 50.000 0.00 0.00 0.00 3.09
626 627 6.700960 CAGATAAAGAGATCACCTGTGCTTAG 59.299 42.308 0.00 0.00 0.00 2.18
627 628 6.407412 CCAGATAAAGAGATCACCTGTGCTTA 60.407 42.308 0.00 0.00 0.00 3.09
628 629 5.426504 CAGATAAAGAGATCACCTGTGCTT 58.573 41.667 0.00 0.00 0.00 3.91
759 760 1.756408 CGCCTCATCTCCTGCAGGAT 61.756 60.000 35.11 19.67 44.46 3.24
1011 1014 1.276622 ACCTCCTAATCGGTTGCAGT 58.723 50.000 0.00 0.00 0.00 4.40
1175 1191 1.980772 GGCTCCATTGCAAGCTGGT 60.981 57.895 16.75 0.00 38.58 4.00
1451 1468 2.439135 TCAAGCTCAGCCTATATGCCAA 59.561 45.455 0.00 0.00 0.00 4.52
1560 1577 4.963276 TTTGTTTATCAAGCGCTGCTAT 57.037 36.364 12.58 7.72 38.25 2.97
1782 1827 7.042797 ACCATTTACATATGTCAAAGATGCC 57.957 36.000 12.68 0.00 0.00 4.40
1871 1916 1.669265 GCACGGATTAGCACCCTAAAC 59.331 52.381 0.00 0.00 37.12 2.01
1910 1955 9.973661 TGTCTTTTTATTCTCTAATTCCCATCA 57.026 29.630 0.00 0.00 0.00 3.07
2032 2090 6.403636 GCACTACCCATGTGTTTCTATTTCAG 60.404 42.308 0.00 0.00 37.70 3.02
2097 2155 9.642312 CATACATATCGCTGCATTGATAAATAC 57.358 33.333 10.89 0.00 31.34 1.89
2275 2336 4.571369 TTACAATGTTCCCGGGTTGATA 57.429 40.909 24.20 12.10 0.00 2.15
2630 2699 5.920193 ATGTACCAATCATTGTCCTTTGG 57.080 39.130 0.00 0.00 43.41 3.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.