Multiple sequence alignment - TraesCS4D01G112200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G112200 chr4D 100.000 7223 0 0 1 7223 93341856 93334634 0.000000e+00 13339.0
1 TraesCS4D01G112200 chr4D 100.000 168 0 0 3651 3818 75782053 75782220 1.960000e-80 311.0
2 TraesCS4D01G112200 chr4D 92.857 112 6 2 2404 2514 110080935 110081045 2.090000e-35 161.0
3 TraesCS4D01G112200 chr4D 100.000 35 0 0 1542 1576 93337617 93337651 1.680000e-06 65.8
4 TraesCS4D01G112200 chr4D 100.000 35 0 0 4206 4240 93340281 93340315 1.680000e-06 65.8
5 TraesCS4D01G112200 chr4A 96.350 2055 55 13 5174 7217 489107709 489109754 0.000000e+00 3362.0
6 TraesCS4D01G112200 chr4A 96.125 1187 35 5 3826 5010 489106530 489107707 0.000000e+00 1927.0
7 TraesCS4D01G112200 chr4A 96.300 919 33 1 1490 2407 489103749 489104667 0.000000e+00 1507.0
8 TraesCS4D01G112200 chr4A 93.235 946 35 7 559 1493 489096401 489097328 0.000000e+00 1365.0
9 TraesCS4D01G112200 chr4A 95.704 675 21 5 2981 3652 489105840 489106509 0.000000e+00 1079.0
10 TraesCS4D01G112200 chr4A 96.586 498 10 3 2497 2988 489104662 489105158 0.000000e+00 819.0
11 TraesCS4D01G112200 chr4A 88.316 291 21 8 1 280 489095974 489096262 3.230000e-88 337.0
12 TraesCS4D01G112200 chr4A 85.238 210 25 5 3610 3816 706572005 706572211 2.040000e-50 211.0
13 TraesCS4D01G112200 chr4A 100.000 35 0 0 1542 1576 489106945 489106911 1.680000e-06 65.8
14 TraesCS4D01G112200 chr4A 97.222 36 1 0 4205 4240 489103837 489103802 2.180000e-05 62.1
15 TraesCS4D01G112200 chrUn 96.210 2058 61 9 5172 7223 281538378 281536332 0.000000e+00 3352.0
16 TraesCS4D01G112200 chrUn 96.210 2058 61 9 5172 7223 281710296 281708250 0.000000e+00 3352.0
17 TraesCS4D01G112200 chrUn 96.210 2058 61 9 5172 7223 289831938 289829892 0.000000e+00 3352.0
18 TraesCS4D01G112200 chrUn 94.268 1797 64 13 507 2268 55911553 55913345 0.000000e+00 2712.0
19 TraesCS4D01G112200 chrUn 98.087 1202 21 2 3813 5013 281539574 281538374 0.000000e+00 2091.0
20 TraesCS4D01G112200 chrUn 98.087 1202 21 2 3813 5013 281711492 281710292 0.000000e+00 2091.0
21 TraesCS4D01G112200 chrUn 98.087 1202 21 2 3813 5013 289833134 289831934 0.000000e+00 2091.0
22 TraesCS4D01G112200 chrUn 95.280 678 23 5 2981 3652 281540246 281539572 0.000000e+00 1066.0
23 TraesCS4D01G112200 chrUn 95.280 678 23 5 2981 3652 281712164 281711490 0.000000e+00 1066.0
24 TraesCS4D01G112200 chrUn 95.280 678 23 5 2981 3652 289833806 289833132 0.000000e+00 1066.0
25 TraesCS4D01G112200 chrUn 96.185 498 12 3 2497 2988 281541411 281540915 0.000000e+00 808.0
26 TraesCS4D01G112200 chrUn 96.185 498 12 3 2497 2988 281713308 281712812 0.000000e+00 808.0
27 TraesCS4D01G112200 chrUn 96.185 498 12 3 2497 2988 456595874 456595378 0.000000e+00 808.0
28 TraesCS4D01G112200 chrUn 93.989 366 10 5 507 862 293869543 293869180 1.770000e-150 544.0
29 TraesCS4D01G112200 chrUn 95.549 337 10 2 6 339 55911092 55911426 1.070000e-147 534.0
30 TraesCS4D01G112200 chrUn 95.549 337 10 2 6 339 293870004 293869670 1.070000e-147 534.0
31 TraesCS4D01G112200 chrUn 95.614 114 3 2 2267 2378 281541598 281541485 1.600000e-41 182.0
32 TraesCS4D01G112200 chrUn 95.614 114 3 2 2267 2378 281713495 281713382 1.600000e-41 182.0
33 TraesCS4D01G112200 chrUn 95.614 114 3 2 2267 2378 456596061 456595948 1.600000e-41 182.0
34 TraesCS4D01G112200 chrUn 96.000 100 4 0 2402 2501 362465901 362465802 5.800000e-36 163.0
35 TraesCS4D01G112200 chrUn 95.181 83 2 2 352 432 55911469 55911551 5.880000e-26 130.0
36 TraesCS4D01G112200 chrUn 98.630 73 1 0 360 432 293869617 293869545 5.880000e-26 130.0
37 TraesCS4D01G112200 chrUn 95.833 48 1 1 3167 3213 406473371 406473324 7.770000e-10 76.8
38 TraesCS4D01G112200 chr5D 100.000 169 0 0 3649 3817 274578010 274578178 5.440000e-81 313.0
39 TraesCS4D01G112200 chr5D 98.810 168 2 0 5006 5173 42949557 42949724 4.240000e-77 300.0
40 TraesCS4D01G112200 chr5D 96.000 100 4 0 2403 2502 412619438 412619537 5.800000e-36 163.0
41 TraesCS4D01G112200 chr5D 90.678 118 8 3 2404 2520 473790000 473790115 3.490000e-33 154.0
42 TraesCS4D01G112200 chr5A 99.422 173 0 1 3651 3822 290391861 290391689 5.440000e-81 313.0
43 TraesCS4D01G112200 chr5A 98.810 168 2 0 5006 5173 355466185 355466018 4.240000e-77 300.0
44 TraesCS4D01G112200 chr5A 93.458 107 5 2 2400 2506 613478437 613478541 2.700000e-34 158.0
45 TraesCS4D01G112200 chr5A 85.088 114 14 3 4669 4782 652908082 652908192 5.920000e-21 113.0
46 TraesCS4D01G112200 chr1D 99.419 172 1 0 3651 3822 178466306 178466477 5.440000e-81 313.0
47 TraesCS4D01G112200 chr1D 99.419 172 1 0 3651 3822 238940216 238940387 5.440000e-81 313.0
48 TraesCS4D01G112200 chr2D 100.000 168 0 0 3651 3818 560959485 560959652 1.960000e-80 311.0
49 TraesCS4D01G112200 chr2D 97.714 175 3 1 5004 5177 609886960 609886786 4.240000e-77 300.0
50 TraesCS4D01G112200 chr7A 98.305 177 2 1 3646 3821 115807693 115807517 7.040000e-80 309.0
51 TraesCS4D01G112200 chr7A 96.133 181 4 3 4996 5173 156116019 156115839 7.090000e-75 292.0
52 TraesCS4D01G112200 chr3B 97.753 178 4 0 3647 3824 62970099 62969922 2.530000e-79 307.0
53 TraesCS4D01G112200 chr3B 96.610 177 5 1 4998 5173 822199798 822199974 7.090000e-75 292.0
54 TraesCS4D01G112200 chr3B 80.476 210 32 6 1578 1782 733427150 733426945 1.260000e-32 152.0
55 TraesCS4D01G112200 chr6D 97.701 174 4 0 3647 3820 389700709 389700536 4.240000e-77 300.0
56 TraesCS4D01G112200 chr6D 96.111 180 6 1 5004 5182 104041156 104041335 7.090000e-75 292.0
57 TraesCS4D01G112200 chr6D 93.299 194 10 2 4983 5173 409753229 409753422 4.270000e-72 283.0
58 TraesCS4D01G112200 chr6D 92.661 109 5 3 2399 2507 419276457 419276562 3.490000e-33 154.0
59 TraesCS4D01G112200 chr6A 97.661 171 4 0 5007 5177 115317247 115317417 1.970000e-75 294.0
60 TraesCS4D01G112200 chr6A 95.960 99 4 0 2402 2500 596589347 596589445 2.090000e-35 161.0
61 TraesCS4D01G112200 chr1A 96.610 177 5 1 4998 5173 493207972 493208148 7.090000e-75 292.0
62 TraesCS4D01G112200 chr1A 97.872 47 1 0 3167 3213 94714147 94714193 1.670000e-11 82.4
63 TraesCS4D01G112200 chr2A 81.517 211 29 7 1578 1782 676166792 676166586 1.610000e-36 165.0
64 TraesCS4D01G112200 chr2A 81.043 211 30 7 1578 1782 746819499 746819293 7.500000e-35 159.0
65 TraesCS4D01G112200 chr7B 81.373 204 30 6 1578 1775 606361362 606361563 7.500000e-35 159.0
66 TraesCS4D01G112200 chr3A 81.373 204 30 6 1578 1775 575760432 575760633 7.500000e-35 159.0
67 TraesCS4D01G112200 chr3A 80.488 205 30 8 1578 1775 556338958 556339159 1.620000e-31 148.0
68 TraesCS4D01G112200 chr5B 94.231 104 5 1 2399 2502 352488719 352488617 2.700000e-34 158.0
69 TraesCS4D01G112200 chr6B 80.882 204 31 6 1578 1775 560639375 560639576 3.490000e-33 154.0
70 TraesCS4D01G112200 chr6B 95.833 48 1 1 3167 3213 596599829 596599782 7.770000e-10 76.8
71 TraesCS4D01G112200 chr2B 91.150 113 8 2 2404 2514 60346911 60347023 1.260000e-32 152.0
72 TraesCS4D01G112200 chr4B 95.833 48 1 1 3167 3213 495569989 495570036 7.770000e-10 76.8
73 TraesCS4D01G112200 chr1B 95.833 48 1 1 3167 3213 672543252 672543299 7.770000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G112200 chr4D 93334634 93341856 7222 True 13339.000000 13339 100.000000 1 7223 1 chr4D.!!$R1 7222
1 TraesCS4D01G112200 chr4A 489103749 489109754 6005 False 1738.800000 3362 96.213000 1490 7217 5 chr4A.!!$F3 5727
2 TraesCS4D01G112200 chr4A 489095974 489097328 1354 False 851.000000 1365 90.775500 1 1493 2 chr4A.!!$F2 1492
3 TraesCS4D01G112200 chrUn 289829892 289833806 3914 True 2169.666667 3352 96.525667 2981 7223 3 chrUn.!!$R5 4242
4 TraesCS4D01G112200 chrUn 281536332 281541598 5266 True 1499.800000 3352 96.275200 2267 7223 5 chrUn.!!$R3 4956
5 TraesCS4D01G112200 chrUn 281708250 281713495 5245 True 1499.800000 3352 96.275200 2267 7223 5 chrUn.!!$R4 4956
6 TraesCS4D01G112200 chrUn 55911092 55913345 2253 False 1125.333333 2712 94.999333 6 2268 3 chrUn.!!$F1 2262
7 TraesCS4D01G112200 chrUn 456595378 456596061 683 True 495.000000 808 95.899500 2267 2988 2 chrUn.!!$R7 721
8 TraesCS4D01G112200 chrUn 293869180 293870004 824 True 402.666667 544 96.056000 6 862 3 chrUn.!!$R6 856

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
483 525 0.462403 GGCAAGCCGGGTACGATTAA 60.462 55.0 6.57 0.00 44.60 1.40 F
484 526 0.654160 GCAAGCCGGGTACGATTAAC 59.346 55.0 6.57 0.00 44.60 2.01 F
1474 1573 0.782384 CGTCCTTCGTGCACAAGTAC 59.218 55.0 18.64 14.38 34.52 2.73 F
2418 2582 0.784495 ACAGTACTCCCTCTGTCCCA 59.216 55.0 0.00 0.00 40.28 4.37 F
3664 4543 0.179081 GCATGTACTCCCTCCGTTCC 60.179 60.0 0.00 0.00 0.00 3.62 F
4978 5869 0.388649 GCGATGTTCGAGTGGACACT 60.389 55.0 4.35 4.35 43.74 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1524 1624 0.401356 TCAATTGGTGAGGCTGCAGA 59.599 50.000 20.43 0.0 0.00 4.26 R
2398 2562 1.187087 GGGACAGAGGGAGTACTGTG 58.813 60.000 0.00 0.0 45.54 3.66 R
3174 4047 0.246086 GGGAATGGTCGCAAAATGCA 59.754 50.000 2.99 0.0 45.36 3.96 R
4049 4939 0.105964 AGTACGGCACAAGCTCACAA 59.894 50.000 0.00 0.0 41.70 3.33 R
5156 6047 1.273381 TGAATACTCCCTCCGTTCCCA 60.273 52.381 0.00 0.0 0.00 4.37 R
6717 7618 0.106268 AACACATGCTGGGTGGACAA 60.106 50.000 0.00 0.0 40.54 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
206 211 1.300931 GCTGGCTGTCGACAAGTCA 60.301 57.895 20.49 18.58 0.00 3.41
215 220 5.082059 GCTGTCGACAAGTCATGTATTTTG 58.918 41.667 20.49 3.53 44.12 2.44
221 226 5.569059 CGACAAGTCATGTATTTTGCCTTTC 59.431 40.000 0.72 0.00 44.12 2.62
222 227 5.783111 ACAAGTCATGTATTTTGCCTTTCC 58.217 37.500 0.00 0.00 41.63 3.13
273 283 2.094182 GGAGCGTGGAATTCAGTCTGTA 60.094 50.000 7.93 0.00 0.00 2.74
274 284 3.430929 GGAGCGTGGAATTCAGTCTGTAT 60.431 47.826 7.93 0.00 0.00 2.29
351 361 8.826546 TCTTAGCAAAATAAGTACGTACTACG 57.173 34.615 27.59 13.43 39.32 3.51
386 428 2.094894 GGTGATTTCGTGCAGACATCTG 59.905 50.000 4.43 4.43 46.40 2.90
432 474 5.860182 CGATTTTCACATTGCAAACTCATCT 59.140 36.000 1.71 0.00 0.00 2.90
433 475 6.033196 CGATTTTCACATTGCAAACTCATCTC 59.967 38.462 1.71 0.00 0.00 2.75
435 477 3.084039 TCACATTGCAAACTCATCTCCC 58.916 45.455 1.71 0.00 0.00 4.30
436 478 3.087031 CACATTGCAAACTCATCTCCCT 58.913 45.455 1.71 0.00 0.00 4.20
437 479 3.087031 ACATTGCAAACTCATCTCCCTG 58.913 45.455 1.71 0.00 0.00 4.45
438 480 3.245016 ACATTGCAAACTCATCTCCCTGA 60.245 43.478 1.71 0.00 0.00 3.86
439 481 3.726557 TTGCAAACTCATCTCCCTGAT 57.273 42.857 0.00 0.00 35.40 2.90
448 490 2.113807 ATCTCCCTGATGATGAGCCA 57.886 50.000 0.00 0.00 33.43 4.75
449 491 1.126488 TCTCCCTGATGATGAGCCAC 58.874 55.000 0.00 0.00 0.00 5.01
450 492 0.835276 CTCCCTGATGATGAGCCACA 59.165 55.000 0.00 0.00 0.00 4.17
451 493 1.420514 CTCCCTGATGATGAGCCACAT 59.579 52.381 0.00 0.00 42.47 3.21
452 494 2.636403 CTCCCTGATGATGAGCCACATA 59.364 50.000 0.00 0.00 39.56 2.29
453 495 3.254089 TCCCTGATGATGAGCCACATAT 58.746 45.455 0.00 0.00 39.56 1.78
454 496 3.654321 TCCCTGATGATGAGCCACATATT 59.346 43.478 0.00 0.00 39.56 1.28
455 497 3.756963 CCCTGATGATGAGCCACATATTG 59.243 47.826 0.00 0.00 39.56 1.90
456 498 4.506095 CCCTGATGATGAGCCACATATTGA 60.506 45.833 0.00 0.00 39.56 2.57
457 499 5.254115 CCTGATGATGAGCCACATATTGAT 58.746 41.667 0.00 0.00 39.56 2.57
458 500 5.123979 CCTGATGATGAGCCACATATTGATG 59.876 44.000 0.00 0.00 39.56 3.07
459 501 5.007682 TGATGATGAGCCACATATTGATGG 58.992 41.667 0.00 0.00 39.56 3.51
460 502 4.710313 TGATGAGCCACATATTGATGGA 57.290 40.909 2.20 0.00 39.56 3.41
461 503 4.648651 TGATGAGCCACATATTGATGGAG 58.351 43.478 2.20 0.00 39.56 3.86
462 504 2.854963 TGAGCCACATATTGATGGAGC 58.145 47.619 2.20 0.00 38.34 4.70
463 505 2.440627 TGAGCCACATATTGATGGAGCT 59.559 45.455 0.00 0.00 44.02 4.09
464 506 2.812591 GAGCCACATATTGATGGAGCTG 59.187 50.000 0.00 0.00 42.42 4.24
465 507 1.884579 GCCACATATTGATGGAGCTGG 59.115 52.381 0.00 0.00 38.34 4.85
466 508 1.884579 CCACATATTGATGGAGCTGGC 59.115 52.381 0.00 0.00 38.34 4.85
467 509 2.578786 CACATATTGATGGAGCTGGCA 58.421 47.619 0.00 0.00 37.39 4.92
468 510 2.953648 CACATATTGATGGAGCTGGCAA 59.046 45.455 0.00 0.00 37.39 4.52
469 511 3.004419 CACATATTGATGGAGCTGGCAAG 59.996 47.826 0.00 0.00 37.39 4.01
470 512 4.558097 ACATATTGATGGAGCTGGCAAGC 61.558 47.826 4.37 4.37 42.73 4.01
479 521 4.077184 CTGGCAAGCCGGGTACGA 62.077 66.667 6.57 0.00 44.60 3.43
480 522 3.385749 CTGGCAAGCCGGGTACGAT 62.386 63.158 6.57 0.00 44.60 3.73
481 523 2.124860 GGCAAGCCGGGTACGATT 60.125 61.111 6.57 0.00 44.60 3.34
482 524 1.144496 GGCAAGCCGGGTACGATTA 59.856 57.895 6.57 0.00 44.60 1.75
483 525 0.462403 GGCAAGCCGGGTACGATTAA 60.462 55.000 6.57 0.00 44.60 1.40
484 526 0.654160 GCAAGCCGGGTACGATTAAC 59.346 55.000 6.57 0.00 44.60 2.01
485 527 2.008045 GCAAGCCGGGTACGATTAACA 61.008 52.381 6.57 0.00 44.60 2.41
486 528 2.557317 CAAGCCGGGTACGATTAACAT 58.443 47.619 6.57 0.00 44.60 2.71
487 529 3.719924 CAAGCCGGGTACGATTAACATA 58.280 45.455 6.57 0.00 44.60 2.29
488 530 3.655276 AGCCGGGTACGATTAACATAG 57.345 47.619 3.10 0.00 44.60 2.23
489 531 2.298163 AGCCGGGTACGATTAACATAGG 59.702 50.000 3.10 0.00 44.60 2.57
490 532 2.680577 CCGGGTACGATTAACATAGGC 58.319 52.381 0.00 0.00 44.60 3.93
491 533 2.611224 CCGGGTACGATTAACATAGGCC 60.611 54.545 0.00 0.00 44.60 5.19
492 534 2.036217 CGGGTACGATTAACATAGGCCA 59.964 50.000 5.01 0.00 44.60 5.36
493 535 3.306502 CGGGTACGATTAACATAGGCCAT 60.307 47.826 5.01 0.00 44.60 4.40
494 536 4.251268 GGGTACGATTAACATAGGCCATC 58.749 47.826 5.01 0.00 0.00 3.51
495 537 4.020485 GGGTACGATTAACATAGGCCATCT 60.020 45.833 5.01 0.00 0.00 2.90
496 538 5.512576 GGGTACGATTAACATAGGCCATCTT 60.513 44.000 5.01 0.00 0.00 2.40
497 539 5.995897 GGTACGATTAACATAGGCCATCTTT 59.004 40.000 5.01 0.00 0.00 2.52
498 540 6.485648 GGTACGATTAACATAGGCCATCTTTT 59.514 38.462 5.01 0.00 0.00 2.27
499 541 6.619801 ACGATTAACATAGGCCATCTTTTC 57.380 37.500 5.01 0.00 0.00 2.29
500 542 6.357367 ACGATTAACATAGGCCATCTTTTCT 58.643 36.000 5.01 0.00 0.00 2.52
501 543 6.828785 ACGATTAACATAGGCCATCTTTTCTT 59.171 34.615 5.01 0.00 0.00 2.52
502 544 7.990886 ACGATTAACATAGGCCATCTTTTCTTA 59.009 33.333 5.01 0.00 0.00 2.10
503 545 8.283291 CGATTAACATAGGCCATCTTTTCTTAC 58.717 37.037 5.01 0.00 0.00 2.34
504 546 7.548196 TTAACATAGGCCATCTTTTCTTACG 57.452 36.000 5.01 0.00 0.00 3.18
505 547 5.099042 ACATAGGCCATCTTTTCTTACGT 57.901 39.130 5.01 0.00 0.00 3.57
506 548 6.229936 ACATAGGCCATCTTTTCTTACGTA 57.770 37.500 5.01 0.00 0.00 3.57
507 549 6.047231 ACATAGGCCATCTTTTCTTACGTAC 58.953 40.000 5.01 0.00 0.00 3.67
508 550 3.518590 AGGCCATCTTTTCTTACGTACG 58.481 45.455 15.01 15.01 0.00 3.67
509 551 2.030091 GGCCATCTTTTCTTACGTACGC 59.970 50.000 16.72 0.00 0.00 4.42
565 607 3.868077 CGACAAATGGTTGGAAGCAAAAA 59.132 39.130 0.00 0.00 40.14 1.94
630 708 7.982761 AACGTCAATACCTAACATAAACCAA 57.017 32.000 0.00 0.00 0.00 3.67
641 725 4.568152 ACATAAACCAACACAGCAAGTC 57.432 40.909 0.00 0.00 0.00 3.01
776 860 4.824166 CGCAGATGGCACAAGCGC 62.824 66.667 14.65 0.00 46.68 5.92
818 902 1.203523 CTCTCTCCTCCACTTCCGTTG 59.796 57.143 0.00 0.00 0.00 4.10
830 914 1.701031 TTCCGTTGCCACTCCTCCAA 61.701 55.000 0.00 0.00 0.00 3.53
935 1019 3.314331 CTCACACCACCGCCTCCT 61.314 66.667 0.00 0.00 0.00 3.69
937 1021 3.314331 CACACCACCGCCTCCTCT 61.314 66.667 0.00 0.00 0.00 3.69
980 1076 1.247567 CACCAGCAAAACCCTACAGG 58.752 55.000 0.00 0.00 43.78 4.00
987 1083 2.459202 AAAACCCTACAGGCCGGACG 62.459 60.000 10.86 0.24 40.58 4.79
1440 1539 1.425448 AGCCTGGTAAGCTTCCAAACT 59.575 47.619 0.00 7.72 37.24 2.66
1442 1541 2.437413 CCTGGTAAGCTTCCAAACTCC 58.563 52.381 0.00 0.00 34.35 3.85
1474 1573 0.782384 CGTCCTTCGTGCACAAGTAC 59.218 55.000 18.64 14.38 34.52 2.73
1524 1624 6.112734 TGAGTTGCATCCACGAGTAAATAAT 58.887 36.000 0.00 0.00 0.00 1.28
1618 1719 2.483188 GGTGGACCGTGGACATATCTTC 60.483 54.545 0.00 0.00 0.00 2.87
1634 1735 9.314321 GACATATCTTCGATTTTACTCTGGAAA 57.686 33.333 0.00 0.00 0.00 3.13
1701 1805 3.777106 AGCTTGATGTTGAGGAAGTCA 57.223 42.857 0.00 0.00 0.00 3.41
1714 1818 4.036734 TGAGGAAGTCAAGCAAATGTTGTC 59.963 41.667 0.00 0.00 29.64 3.18
1763 1867 3.592059 TGATTTAGAGGGGAAACGTTCG 58.408 45.455 0.00 0.00 0.00 3.95
1789 1893 5.588246 TGCTGTGATCAACAAGTTTGAGTTA 59.412 36.000 0.00 0.00 38.67 2.24
2060 2164 8.417884 ACTAGTCAAAATAATCTGAGGCTACTC 58.582 37.037 0.00 0.00 44.23 2.59
2065 2169 8.417106 TCAAAATAATCTGAGGCTACTCTGTAG 58.583 37.037 0.00 0.77 44.29 2.74
2077 2181 4.938226 GCTACTCTGTAGGAAAACTGCATT 59.062 41.667 6.83 0.00 41.13 3.56
2252 2364 6.694411 GGTGTGAGTCATTTATCAAATGCATC 59.306 38.462 0.00 7.50 46.09 3.91
2272 2384 5.050837 GCATCAAGTTTCACTCGCAAAAATT 60.051 36.000 0.00 0.00 0.00 1.82
2398 2562 3.817647 CAGCCTGCTATACCAAATCTTCC 59.182 47.826 0.00 0.00 0.00 3.46
2401 2565 4.780815 CCTGCTATACCAAATCTTCCACA 58.219 43.478 0.00 0.00 0.00 4.17
2402 2566 4.818546 CCTGCTATACCAAATCTTCCACAG 59.181 45.833 0.00 0.00 0.00 3.66
2403 2567 5.431765 CTGCTATACCAAATCTTCCACAGT 58.568 41.667 0.00 0.00 0.00 3.55
2404 2568 6.408092 CCTGCTATACCAAATCTTCCACAGTA 60.408 42.308 0.00 0.00 0.00 2.74
2405 2569 6.346096 TGCTATACCAAATCTTCCACAGTAC 58.654 40.000 0.00 0.00 0.00 2.73
2406 2570 6.156256 TGCTATACCAAATCTTCCACAGTACT 59.844 38.462 0.00 0.00 0.00 2.73
2407 2571 6.702282 GCTATACCAAATCTTCCACAGTACTC 59.298 42.308 0.00 0.00 0.00 2.59
2408 2572 4.287766 ACCAAATCTTCCACAGTACTCC 57.712 45.455 0.00 0.00 0.00 3.85
2409 2573 3.009143 ACCAAATCTTCCACAGTACTCCC 59.991 47.826 0.00 0.00 0.00 4.30
2410 2574 3.264450 CCAAATCTTCCACAGTACTCCCT 59.736 47.826 0.00 0.00 0.00 4.20
2411 2575 4.508662 CAAATCTTCCACAGTACTCCCTC 58.491 47.826 0.00 0.00 0.00 4.30
2412 2576 3.767309 ATCTTCCACAGTACTCCCTCT 57.233 47.619 0.00 0.00 0.00 3.69
2413 2577 2.808919 TCTTCCACAGTACTCCCTCTG 58.191 52.381 0.00 0.00 37.65 3.35
2414 2578 2.110188 TCTTCCACAGTACTCCCTCTGT 59.890 50.000 0.00 0.00 44.32 3.41
2415 2579 2.217510 TCCACAGTACTCCCTCTGTC 57.782 55.000 0.00 0.00 42.05 3.51
2416 2580 1.187087 CCACAGTACTCCCTCTGTCC 58.813 60.000 0.00 0.00 42.05 4.02
2417 2581 1.187087 CACAGTACTCCCTCTGTCCC 58.813 60.000 0.00 0.00 42.05 4.46
2418 2582 0.784495 ACAGTACTCCCTCTGTCCCA 59.216 55.000 0.00 0.00 40.28 4.37
2419 2583 1.149288 ACAGTACTCCCTCTGTCCCAA 59.851 52.381 0.00 0.00 40.28 4.12
2420 2584 2.257207 CAGTACTCCCTCTGTCCCAAA 58.743 52.381 0.00 0.00 0.00 3.28
2421 2585 2.637872 CAGTACTCCCTCTGTCCCAAAA 59.362 50.000 0.00 0.00 0.00 2.44
2422 2586 3.264450 CAGTACTCCCTCTGTCCCAAAAT 59.736 47.826 0.00 0.00 0.00 1.82
2423 2587 4.469945 CAGTACTCCCTCTGTCCCAAAATA 59.530 45.833 0.00 0.00 0.00 1.40
2424 2588 5.045869 CAGTACTCCCTCTGTCCCAAAATAA 60.046 44.000 0.00 0.00 0.00 1.40
2425 2589 4.576330 ACTCCCTCTGTCCCAAAATAAG 57.424 45.455 0.00 0.00 0.00 1.73
2426 2590 3.916989 ACTCCCTCTGTCCCAAAATAAGT 59.083 43.478 0.00 0.00 0.00 2.24
2427 2591 4.263506 ACTCCCTCTGTCCCAAAATAAGTG 60.264 45.833 0.00 0.00 0.00 3.16
2428 2592 3.655777 TCCCTCTGTCCCAAAATAAGTGT 59.344 43.478 0.00 0.00 0.00 3.55
2429 2593 4.010349 CCCTCTGTCCCAAAATAAGTGTC 58.990 47.826 0.00 0.00 0.00 3.67
2430 2594 4.263506 CCCTCTGTCCCAAAATAAGTGTCT 60.264 45.833 0.00 0.00 0.00 3.41
2431 2595 5.316987 CCTCTGTCCCAAAATAAGTGTCTT 58.683 41.667 0.00 0.00 0.00 3.01
2432 2596 6.472887 CCTCTGTCCCAAAATAAGTGTCTTA 58.527 40.000 0.00 0.00 0.00 2.10
2433 2597 6.940298 CCTCTGTCCCAAAATAAGTGTCTTAA 59.060 38.462 0.00 0.00 0.00 1.85
2434 2598 7.094762 CCTCTGTCCCAAAATAAGTGTCTTAAC 60.095 40.741 0.00 0.00 0.00 2.01
2435 2599 7.514721 TCTGTCCCAAAATAAGTGTCTTAACT 58.485 34.615 0.00 0.00 0.00 2.24
2436 2600 7.996644 TCTGTCCCAAAATAAGTGTCTTAACTT 59.003 33.333 0.00 0.00 42.89 2.66
2437 2601 8.528044 TGTCCCAAAATAAGTGTCTTAACTTT 57.472 30.769 0.00 0.00 40.77 2.66
2438 2602 8.410141 TGTCCCAAAATAAGTGTCTTAACTTTG 58.590 33.333 14.00 14.00 40.77 2.77
2439 2603 8.410912 GTCCCAAAATAAGTGTCTTAACTTTGT 58.589 33.333 16.72 0.00 40.77 2.83
2440 2604 9.629878 TCCCAAAATAAGTGTCTTAACTTTGTA 57.370 29.630 16.72 8.94 40.77 2.41
2441 2605 9.673454 CCCAAAATAAGTGTCTTAACTTTGTAC 57.327 33.333 16.72 0.00 40.77 2.90
2476 2640 6.646267 ACAAAGTTGTACTAAGGTTGAGACA 58.354 36.000 0.00 0.00 40.16 3.41
2477 2641 6.537660 ACAAAGTTGTACTAAGGTTGAGACAC 59.462 38.462 0.00 0.00 40.16 3.67
2478 2642 6.481434 AAGTTGTACTAAGGTTGAGACACT 57.519 37.500 0.00 0.00 0.00 3.55
2479 2643 6.481434 AGTTGTACTAAGGTTGAGACACTT 57.519 37.500 0.00 0.00 0.00 3.16
2480 2644 7.592885 AGTTGTACTAAGGTTGAGACACTTA 57.407 36.000 0.00 0.00 0.00 2.24
2481 2645 8.191534 AGTTGTACTAAGGTTGAGACACTTAT 57.808 34.615 0.00 0.00 0.00 1.73
2482 2646 8.648693 AGTTGTACTAAGGTTGAGACACTTATT 58.351 33.333 0.00 0.00 0.00 1.40
2483 2647 9.269453 GTTGTACTAAGGTTGAGACACTTATTT 57.731 33.333 0.00 0.00 0.00 1.40
2484 2648 9.841295 TTGTACTAAGGTTGAGACACTTATTTT 57.159 29.630 0.00 0.00 0.00 1.82
2485 2649 9.268268 TGTACTAAGGTTGAGACACTTATTTTG 57.732 33.333 0.00 0.00 0.00 2.44
2486 2650 9.485206 GTACTAAGGTTGAGACACTTATTTTGA 57.515 33.333 0.00 0.00 0.00 2.69
2487 2651 8.608844 ACTAAGGTTGAGACACTTATTTTGAG 57.391 34.615 0.00 0.00 0.00 3.02
2488 2652 8.429641 ACTAAGGTTGAGACACTTATTTTGAGA 58.570 33.333 0.00 0.00 0.00 3.27
2489 2653 7.497925 AAGGTTGAGACACTTATTTTGAGAC 57.502 36.000 0.00 0.00 0.00 3.36
2490 2654 5.696724 AGGTTGAGACACTTATTTTGAGACG 59.303 40.000 0.00 0.00 0.00 4.18
2491 2655 5.107065 GGTTGAGACACTTATTTTGAGACGG 60.107 44.000 0.00 0.00 0.00 4.79
2492 2656 5.462530 TGAGACACTTATTTTGAGACGGA 57.537 39.130 0.00 0.00 0.00 4.69
2493 2657 5.470368 TGAGACACTTATTTTGAGACGGAG 58.530 41.667 0.00 0.00 0.00 4.63
2494 2658 4.822026 AGACACTTATTTTGAGACGGAGG 58.178 43.478 0.00 0.00 0.00 4.30
2495 2659 4.527038 AGACACTTATTTTGAGACGGAGGA 59.473 41.667 0.00 0.00 0.00 3.71
2507 2671 6.205101 TGAGACGGAGGAAGTACTATTTTC 57.795 41.667 0.00 0.00 0.00 2.29
2632 2796 7.230849 TCTGGTTTCATATTCTGTTGCATTT 57.769 32.000 0.00 0.00 0.00 2.32
2808 2973 4.700213 GGCTTCATTCCTGCTGTAAACTAA 59.300 41.667 0.00 0.00 0.00 2.24
2962 3132 2.619646 CTGCATGTTGTAGGCATATGCA 59.380 45.455 28.07 6.84 46.10 3.96
3174 4047 6.543735 ACACAAGAAGCCTAGTAAATCCTTT 58.456 36.000 0.00 0.00 0.00 3.11
3279 4152 2.081425 CTCTCTTCCATCCTCCCGCG 62.081 65.000 0.00 0.00 0.00 6.46
3283 4156 1.672854 CTTCCATCCTCCCGCGTACA 61.673 60.000 4.92 0.00 0.00 2.90
3355 4228 5.950883 TCTATGTCCTCTTGAGTGTTAACG 58.049 41.667 0.26 0.00 0.00 3.18
3368 4241 2.812011 GTGTTAACGTCATGGCCTCTTT 59.188 45.455 3.32 0.00 0.00 2.52
3385 4258 4.522022 CCTCTTTTTGGCATCTCTTTGTCT 59.478 41.667 0.00 0.00 0.00 3.41
3392 4265 3.327757 TGGCATCTCTTTGTCTTACCAGT 59.672 43.478 0.00 0.00 0.00 4.00
3396 4269 6.398918 GCATCTCTTTGTCTTACCAGTAAGA 58.601 40.000 14.75 14.75 46.51 2.10
3429 4302 6.854091 TCAGCATTATAGCTCATGAGATCT 57.146 37.500 27.04 15.36 44.54 2.75
3527 4400 9.440761 AGATGAGGAGGAAAGTAATAGTGTAAT 57.559 33.333 0.00 0.00 0.00 1.89
3553 4429 4.687018 TCAATGCATGCTGAAACAATTCAC 59.313 37.500 20.33 0.00 40.59 3.18
3608 4484 1.891150 CATGCCCCATAATCAAGCTCC 59.109 52.381 0.00 0.00 0.00 4.70
3609 4485 0.185901 TGCCCCATAATCAAGCTCCC 59.814 55.000 0.00 0.00 0.00 4.30
3610 4486 0.480252 GCCCCATAATCAAGCTCCCT 59.520 55.000 0.00 0.00 0.00 4.20
3658 4537 3.550437 ATGTGAAGCATGTACTCCCTC 57.450 47.619 0.00 0.00 36.26 4.30
3659 4538 1.555075 TGTGAAGCATGTACTCCCTCC 59.445 52.381 0.00 0.00 0.00 4.30
3660 4539 0.824109 TGAAGCATGTACTCCCTCCG 59.176 55.000 0.00 0.00 0.00 4.63
3661 4540 0.824759 GAAGCATGTACTCCCTCCGT 59.175 55.000 0.00 0.00 0.00 4.69
3662 4541 1.207329 GAAGCATGTACTCCCTCCGTT 59.793 52.381 0.00 0.00 0.00 4.44
3663 4542 0.824759 AGCATGTACTCCCTCCGTTC 59.175 55.000 0.00 0.00 0.00 3.95
3664 4543 0.179081 GCATGTACTCCCTCCGTTCC 60.179 60.000 0.00 0.00 0.00 3.62
3665 4544 1.486211 CATGTACTCCCTCCGTTCCT 58.514 55.000 0.00 0.00 0.00 3.36
3666 4545 2.662866 CATGTACTCCCTCCGTTCCTA 58.337 52.381 0.00 0.00 0.00 2.94
3667 4546 2.905415 TGTACTCCCTCCGTTCCTAA 57.095 50.000 0.00 0.00 0.00 2.69
3668 4547 3.173953 TGTACTCCCTCCGTTCCTAAA 57.826 47.619 0.00 0.00 0.00 1.85
3669 4548 3.716431 TGTACTCCCTCCGTTCCTAAAT 58.284 45.455 0.00 0.00 0.00 1.40
3670 4549 4.870636 TGTACTCCCTCCGTTCCTAAATA 58.129 43.478 0.00 0.00 0.00 1.40
3671 4550 5.461327 TGTACTCCCTCCGTTCCTAAATAT 58.539 41.667 0.00 0.00 0.00 1.28
3672 4551 5.901276 TGTACTCCCTCCGTTCCTAAATATT 59.099 40.000 0.00 0.00 0.00 1.28
3673 4552 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
3674 4553 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
3675 4554 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
3676 4555 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
3677 4556 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
3678 4557 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
3679 4558 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
3680 4559 7.122204 CCCTCCGTTCCTAAATATTTGTCTTTT 59.878 37.037 11.05 0.00 0.00 2.27
3681 4560 8.520351 CCTCCGTTCCTAAATATTTGTCTTTTT 58.480 33.333 11.05 0.00 0.00 1.94
3698 4577 9.965824 TTGTCTTTTTAGAGATTTCAAATGGAC 57.034 29.630 0.00 0.00 0.00 4.02
3699 4578 9.354673 TGTCTTTTTAGAGATTTCAAATGGACT 57.645 29.630 0.00 0.00 0.00 3.85
3715 4594 3.900971 TGGACTACCACATACGGATGTA 58.099 45.455 14.23 0.00 44.82 2.29
3716 4595 4.476297 TGGACTACCACATACGGATGTAT 58.524 43.478 14.23 7.46 44.82 2.29
3717 4596 5.633117 TGGACTACCACATACGGATGTATA 58.367 41.667 14.23 8.27 44.82 1.47
3718 4597 6.250711 TGGACTACCACATACGGATGTATAT 58.749 40.000 14.23 4.37 44.82 0.86
3719 4598 7.404481 TGGACTACCACATACGGATGTATATA 58.596 38.462 14.23 5.36 44.82 0.86
3720 4599 7.555195 TGGACTACCACATACGGATGTATATAG 59.445 40.741 14.23 16.35 44.82 1.31
3721 4600 7.772292 GGACTACCACATACGGATGTATATAGA 59.228 40.741 22.62 5.04 44.82 1.98
3722 4601 8.503458 ACTACCACATACGGATGTATATAGAC 57.497 38.462 22.62 0.00 44.82 2.59
3723 4602 8.105197 ACTACCACATACGGATGTATATAGACA 58.895 37.037 22.62 2.07 44.82 3.41
3724 4603 7.956328 ACCACATACGGATGTATATAGACAT 57.044 36.000 14.23 12.70 44.82 3.06
3726 4605 9.642343 ACCACATACGGATGTATATAGACATAT 57.358 33.333 14.23 5.08 44.82 1.78
3755 4634 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
3756 4635 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
3757 4636 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
3758 4637 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
3759 4638 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
3760 4639 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
3761 4640 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
3762 4641 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
3763 4642 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
3764 4643 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
3765 4644 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
3766 4645 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
3767 4646 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
3768 4647 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
3769 4648 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
3770 4649 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
3771 4650 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
3772 4651 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
3773 4652 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
3774 4653 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
3775 4654 4.617530 GCTCCGTATGTAGTCACTTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
3776 4655 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
3777 4656 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
3778 4657 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
3779 4658 6.588756 TCCGTATGTAGTCACTTGTTGAAATC 59.411 38.462 0.00 0.00 35.39 2.17
3780 4659 6.590292 CCGTATGTAGTCACTTGTTGAAATCT 59.410 38.462 0.00 0.00 35.39 2.40
3781 4660 7.201444 CCGTATGTAGTCACTTGTTGAAATCTC 60.201 40.741 0.00 0.00 35.39 2.75
3782 4661 7.542477 CGTATGTAGTCACTTGTTGAAATCTCT 59.458 37.037 0.00 0.00 35.39 3.10
3783 4662 9.856488 GTATGTAGTCACTTGTTGAAATCTCTA 57.144 33.333 0.00 0.00 35.39 2.43
3784 4663 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
3785 4664 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
3786 4665 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
3787 4666 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
3788 4667 8.600449 AGTCACTTGTTGAAATCTCTAGAAAG 57.400 34.615 0.00 0.00 35.39 2.62
3789 4668 8.424918 AGTCACTTGTTGAAATCTCTAGAAAGA 58.575 33.333 0.00 0.00 35.39 2.52
3790 4669 8.491950 GTCACTTGTTGAAATCTCTAGAAAGAC 58.508 37.037 0.00 0.00 35.39 3.01
3791 4670 8.204160 TCACTTGTTGAAATCTCTAGAAAGACA 58.796 33.333 0.00 0.00 0.00 3.41
3792 4671 8.830580 CACTTGTTGAAATCTCTAGAAAGACAA 58.169 33.333 0.00 0.00 0.00 3.18
3793 4672 9.396022 ACTTGTTGAAATCTCTAGAAAGACAAA 57.604 29.630 0.00 0.00 0.00 2.83
3806 4685 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
3807 4686 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
3808 4687 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
3809 4688 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
3810 4689 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
3811 4690 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
3812 4691 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
3813 4692 5.191124 ACAAATATTTAGGAACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
3832 4711 8.547967 AGGGAGTATATATTAACACATTTGCG 57.452 34.615 0.00 0.00 0.00 4.85
3978 4868 2.158971 ACCATTGTTTGACCAACTTGGC 60.159 45.455 7.81 1.86 42.67 4.52
4021 4911 8.925700 GGCCTTATTTTAGTTCAACAAAATCTG 58.074 33.333 11.56 7.82 36.18 2.90
4049 4939 9.236006 GGTCTGCAGAATATTGGAATATATGTT 57.764 33.333 20.19 0.00 31.57 2.71
4267 5157 2.515429 AGGGCATCATTATGAAGGTGGT 59.485 45.455 0.00 0.00 34.84 4.16
4312 5202 4.179926 TGATGTAGCTGACAAGAGACAC 57.820 45.455 0.00 0.00 42.78 3.67
4411 5301 5.835113 TGGCTAAATCTTCCAAGCAATAC 57.165 39.130 0.00 0.00 36.68 1.89
4692 5583 4.916424 AGAAGTATAATTCCTGCTGGGGAT 59.084 41.667 10.07 1.90 33.88 3.85
4713 5604 7.119262 GGGGATACTTCACAATTTATACCATCG 59.881 40.741 0.00 0.00 27.45 3.84
4978 5869 0.388649 GCGATGTTCGAGTGGACACT 60.389 55.000 4.35 4.35 43.74 3.55
5018 5909 8.919777 TCACATATATACATATACTCCCTCCG 57.080 38.462 0.00 0.00 0.00 4.63
5019 5910 8.500238 TCACATATATACATATACTCCCTCCGT 58.500 37.037 0.00 0.00 0.00 4.69
5020 5911 9.132923 CACATATATACATATACTCCCTCCGTT 57.867 37.037 0.00 0.00 0.00 4.44
5021 5912 9.352191 ACATATATACATATACTCCCTCCGTTC 57.648 37.037 0.00 0.00 0.00 3.95
5022 5913 8.794553 CATATATACATATACTCCCTCCGTTCC 58.205 40.741 0.00 0.00 0.00 3.62
5023 5914 3.614568 ACATATACTCCCTCCGTTCCT 57.385 47.619 0.00 0.00 0.00 3.36
5024 5915 4.736611 ACATATACTCCCTCCGTTCCTA 57.263 45.455 0.00 0.00 0.00 2.94
5025 5916 5.070823 ACATATACTCCCTCCGTTCCTAA 57.929 43.478 0.00 0.00 0.00 2.69
5026 5917 5.461327 ACATATACTCCCTCCGTTCCTAAA 58.539 41.667 0.00 0.00 0.00 1.85
5027 5918 6.082707 ACATATACTCCCTCCGTTCCTAAAT 58.917 40.000 0.00 0.00 0.00 1.40
5028 5919 7.243824 ACATATACTCCCTCCGTTCCTAAATA 58.756 38.462 0.00 0.00 0.00 1.40
5029 5920 7.899709 ACATATACTCCCTCCGTTCCTAAATAT 59.100 37.037 0.00 0.00 0.00 1.28
5030 5921 9.417561 CATATACTCCCTCCGTTCCTAAATATA 57.582 37.037 0.00 0.00 0.00 0.86
5032 5923 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
5033 5924 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
5034 5925 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
5035 5926 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
5036 5927 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
5037 5928 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
5038 5929 7.991460 CCCTCCGTTCCTAAATATAAGTCTTTT 59.009 37.037 0.00 0.00 0.00 2.27
5039 5930 9.392259 CCTCCGTTCCTAAATATAAGTCTTTTT 57.608 33.333 0.00 0.00 0.00 1.94
5056 5947 9.750125 AAGTCTTTTTAGACATTTCAAATGGAC 57.250 29.630 14.70 8.92 41.02 4.02
5057 5948 9.136323 AGTCTTTTTAGACATTTCAAATGGACT 57.864 29.630 14.70 14.18 41.02 3.85
5062 5953 9.959749 TTTTAGACATTTCAAATGGACTACAAC 57.040 29.630 14.70 0.00 0.00 3.32
5063 5954 8.684386 TTAGACATTTCAAATGGACTACAACA 57.316 30.769 14.70 1.25 0.00 3.33
5064 5955 7.765695 AGACATTTCAAATGGACTACAACAT 57.234 32.000 14.70 0.00 0.00 2.71
5065 5956 8.862325 AGACATTTCAAATGGACTACAACATA 57.138 30.769 14.70 0.00 0.00 2.29
5066 5957 8.730680 AGACATTTCAAATGGACTACAACATAC 58.269 33.333 14.70 0.00 0.00 2.39
5067 5958 7.526608 ACATTTCAAATGGACTACAACATACG 58.473 34.615 14.70 0.00 0.00 3.06
5068 5959 6.489127 TTTCAAATGGACTACAACATACGG 57.511 37.500 0.00 0.00 0.00 4.02
5069 5960 5.408880 TCAAATGGACTACAACATACGGA 57.591 39.130 0.00 0.00 0.00 4.69
5070 5961 5.984725 TCAAATGGACTACAACATACGGAT 58.015 37.500 0.00 0.00 0.00 4.18
5071 5962 5.815222 TCAAATGGACTACAACATACGGATG 59.185 40.000 5.94 5.94 39.16 3.51
5073 5964 6.474140 AATGGACTACAACATACGGATGTA 57.526 37.500 15.10 0.00 45.93 2.29
5074 5965 6.665992 ATGGACTACAACATACGGATGTAT 57.334 37.500 15.10 8.21 45.93 2.29
5111 6002 9.677567 TTTAAAGTGTAGATTCACTCATTTTGC 57.322 29.630 0.00 0.00 46.25 3.68
5112 6003 7.516198 AAAGTGTAGATTCACTCATTTTGCT 57.484 32.000 0.00 0.00 46.25 3.91
5113 6004 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
5114 6005 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
5115 6006 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
5116 6007 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
5117 6008 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
5118 6009 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
5119 6010 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
5120 6011 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
5121 6012 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
5122 6013 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
5123 6014 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
5124 6015 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
5125 6016 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
5126 6017 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
5127 6018 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
5128 6019 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
5129 6020 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
5130 6021 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
5131 6022 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
5132 6023 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
5133 6024 4.174009 CTCCGTATGTAGTCACTTGTTGG 58.826 47.826 0.00 0.00 0.00 3.77
5134 6025 3.827876 TCCGTATGTAGTCACTTGTTGGA 59.172 43.478 0.00 0.00 0.00 3.53
5135 6026 4.281435 TCCGTATGTAGTCACTTGTTGGAA 59.719 41.667 0.00 0.00 0.00 3.53
5136 6027 5.046878 TCCGTATGTAGTCACTTGTTGGAAT 60.047 40.000 0.00 0.00 0.00 3.01
5137 6028 5.291128 CCGTATGTAGTCACTTGTTGGAATC 59.709 44.000 0.00 0.00 0.00 2.52
5138 6029 6.100004 CGTATGTAGTCACTTGTTGGAATCT 58.900 40.000 0.00 0.00 0.00 2.40
5139 6030 6.253727 CGTATGTAGTCACTTGTTGGAATCTC 59.746 42.308 0.00 0.00 0.00 2.75
5140 6031 5.808366 TGTAGTCACTTGTTGGAATCTCT 57.192 39.130 0.00 0.00 0.00 3.10
5141 6032 6.911250 TGTAGTCACTTGTTGGAATCTCTA 57.089 37.500 0.00 0.00 0.00 2.43
5142 6033 6.925211 TGTAGTCACTTGTTGGAATCTCTAG 58.075 40.000 0.00 0.00 0.00 2.43
5143 6034 6.719829 TGTAGTCACTTGTTGGAATCTCTAGA 59.280 38.462 0.00 0.00 0.00 2.43
5144 6035 6.672266 AGTCACTTGTTGGAATCTCTAGAA 57.328 37.500 0.00 0.00 0.00 2.10
5145 6036 7.067496 AGTCACTTGTTGGAATCTCTAGAAA 57.933 36.000 0.00 0.00 0.00 2.52
5146 6037 7.158021 AGTCACTTGTTGGAATCTCTAGAAAG 58.842 38.462 0.00 0.00 0.00 2.62
5147 6038 7.015682 AGTCACTTGTTGGAATCTCTAGAAAGA 59.984 37.037 0.00 0.00 0.00 2.52
5148 6039 7.117092 GTCACTTGTTGGAATCTCTAGAAAGAC 59.883 40.741 0.00 0.00 0.00 3.01
5149 6040 7.015682 TCACTTGTTGGAATCTCTAGAAAGACT 59.984 37.037 0.00 0.00 0.00 3.24
5150 6041 7.659390 CACTTGTTGGAATCTCTAGAAAGACTT 59.341 37.037 0.00 0.00 0.00 3.01
5151 6042 8.871125 ACTTGTTGGAATCTCTAGAAAGACTTA 58.129 33.333 0.00 0.00 0.00 2.24
5152 6043 9.883142 CTTGTTGGAATCTCTAGAAAGACTTAT 57.117 33.333 0.00 0.00 0.00 1.73
5163 6054 9.250624 CTCTAGAAAGACTTATATTTGGGAACG 57.749 37.037 0.00 0.00 0.00 3.95
5164 6055 8.202137 TCTAGAAAGACTTATATTTGGGAACGG 58.798 37.037 0.00 0.00 0.00 4.44
5165 6056 6.954232 AGAAAGACTTATATTTGGGAACGGA 58.046 36.000 0.00 0.00 0.00 4.69
5166 6057 7.048512 AGAAAGACTTATATTTGGGAACGGAG 58.951 38.462 0.00 0.00 0.00 4.63
5167 6058 5.291905 AGACTTATATTTGGGAACGGAGG 57.708 43.478 0.00 0.00 0.00 4.30
5168 6059 4.102681 AGACTTATATTTGGGAACGGAGGG 59.897 45.833 0.00 0.00 0.00 4.30
5169 6060 4.042174 ACTTATATTTGGGAACGGAGGGA 58.958 43.478 0.00 0.00 0.00 4.20
5170 6061 4.102681 ACTTATATTTGGGAACGGAGGGAG 59.897 45.833 0.00 0.00 0.00 4.30
5210 6101 5.529800 TGCTAGGTTGTTTTTCCTTACTGAC 59.470 40.000 0.00 0.00 35.51 3.51
5594 6485 3.134458 CTCTTCATGGGTAAAGATCCGC 58.866 50.000 0.00 0.00 31.45 5.54
6111 7002 4.314440 TTCACGGGCAGCGAGCTT 62.314 61.111 0.00 0.00 44.79 3.74
6126 7017 2.182030 CTTCTCCGGCTGTCGACC 59.818 66.667 14.12 0.00 42.43 4.79
6382 7273 9.388346 CACTAGATAAGAGTTGTGTATTCGATC 57.612 37.037 0.00 0.00 0.00 3.69
6383 7274 8.569641 ACTAGATAAGAGTTGTGTATTCGATCC 58.430 37.037 0.00 0.00 0.00 3.36
6384 7275 6.750148 AGATAAGAGTTGTGTATTCGATCCC 58.250 40.000 0.00 0.00 0.00 3.85
6472 7371 2.110721 AGAATCCTATGCCCATTTCCCC 59.889 50.000 0.00 0.00 0.00 4.81
6493 7392 1.891919 GTCTGCACCGAAACTGGCA 60.892 57.895 0.00 0.00 34.66 4.92
6543 7443 2.697425 GTGCACTCATACGCTGCG 59.303 61.111 21.91 21.91 33.35 5.18
6681 7582 1.002888 ACCTTCACACTGATGGCTCTG 59.997 52.381 4.48 0.00 43.31 3.35
6717 7618 1.221840 GTCGATGCCATGTCACCCT 59.778 57.895 0.00 0.00 0.00 4.34
6811 7712 0.745845 CCAGTACTGGCATGGCAGTC 60.746 60.000 46.29 36.16 44.73 3.51
6846 7748 2.266055 GACGAGTGGGCCCTTCTG 59.734 66.667 25.70 17.48 0.00 3.02
6938 7840 1.656441 GAATGGTGATGCGATGGCC 59.344 57.895 0.00 0.00 38.85 5.36
7066 7970 4.559153 GGCTATCTCTGCTTCTGAATCTC 58.441 47.826 0.00 0.00 0.00 2.75
7099 8004 0.999406 CAGTACGACGGAGCCAAATG 59.001 55.000 0.00 0.00 0.00 2.32
7119 8024 2.708865 GGAGACCGGTCGAGGGTTC 61.709 68.421 28.26 18.53 38.07 3.62
7157 8065 2.599677 GGGTGGTTGGTTGTATGGAAA 58.400 47.619 0.00 0.00 0.00 3.13
7158 8066 3.169908 GGGTGGTTGGTTGTATGGAAAT 58.830 45.455 0.00 0.00 0.00 2.17
7160 8068 3.056179 GGTGGTTGGTTGTATGGAAATGG 60.056 47.826 0.00 0.00 0.00 3.16
7162 8070 4.282195 GTGGTTGGTTGTATGGAAATGGAA 59.718 41.667 0.00 0.00 0.00 3.53
7164 8072 4.481463 GTTGGTTGTATGGAAATGGAACG 58.519 43.478 0.00 0.00 0.00 3.95
7165 8073 3.085533 TGGTTGTATGGAAATGGAACGG 58.914 45.455 0.00 0.00 0.00 4.44
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
206 211 4.764823 TCAGTTCGGAAAGGCAAAATACAT 59.235 37.500 0.00 0.00 0.00 2.29
215 220 0.790814 CGACTTCAGTTCGGAAAGGC 59.209 55.000 0.00 0.00 0.00 4.35
221 226 3.846360 AGGTAATTCGACTTCAGTTCGG 58.154 45.455 0.00 0.00 0.00 4.30
222 227 4.434330 GCAAGGTAATTCGACTTCAGTTCG 60.434 45.833 0.00 0.00 0.00 3.95
258 268 9.958180 TCAAGAAAATATACAGACTGAATTCCA 57.042 29.630 10.08 0.00 0.00 3.53
344 354 7.538575 TCACCAAATTAAGTCCTACGTAGTAC 58.461 38.462 20.73 15.55 45.11 2.73
345 355 7.701539 TCACCAAATTAAGTCCTACGTAGTA 57.298 36.000 20.73 2.30 45.11 1.82
349 359 6.091713 CGAAATCACCAAATTAAGTCCTACGT 59.908 38.462 0.00 0.00 0.00 3.57
351 361 7.241376 CACGAAATCACCAAATTAAGTCCTAC 58.759 38.462 0.00 0.00 0.00 3.18
356 366 5.240623 TCTGCACGAAATCACCAAATTAAGT 59.759 36.000 0.00 0.00 0.00 2.24
357 367 5.569059 GTCTGCACGAAATCACCAAATTAAG 59.431 40.000 0.00 0.00 0.00 1.85
358 368 5.009110 TGTCTGCACGAAATCACCAAATTAA 59.991 36.000 0.00 0.00 0.00 1.40
432 474 1.514983 ATGTGGCTCATCATCAGGGA 58.485 50.000 0.00 0.00 29.76 4.20
433 475 3.715638 ATATGTGGCTCATCATCAGGG 57.284 47.619 5.16 0.00 37.91 4.45
435 477 5.123979 CCATCAATATGTGGCTCATCATCAG 59.876 44.000 5.16 0.00 37.91 2.90
436 478 5.007682 CCATCAATATGTGGCTCATCATCA 58.992 41.667 5.16 0.00 37.91 3.07
437 479 5.250982 TCCATCAATATGTGGCTCATCATC 58.749 41.667 5.16 0.00 37.91 2.92
438 480 5.251182 TCCATCAATATGTGGCTCATCAT 57.749 39.130 5.16 0.00 37.91 2.45
439 481 4.648651 CTCCATCAATATGTGGCTCATCA 58.351 43.478 5.16 0.00 37.91 3.07
440 482 3.439476 GCTCCATCAATATGTGGCTCATC 59.561 47.826 5.16 0.00 37.91 2.92
441 483 3.074094 AGCTCCATCAATATGTGGCTCAT 59.926 43.478 7.28 7.28 35.50 2.90
442 484 2.440627 AGCTCCATCAATATGTGGCTCA 59.559 45.455 0.00 0.00 35.50 4.26
443 485 2.812591 CAGCTCCATCAATATGTGGCTC 59.187 50.000 0.00 0.00 37.10 4.70
444 486 2.488528 CCAGCTCCATCAATATGTGGCT 60.489 50.000 0.00 0.00 38.61 4.75
445 487 1.884579 CCAGCTCCATCAATATGTGGC 59.115 52.381 0.00 0.00 35.43 5.01
446 488 1.884579 GCCAGCTCCATCAATATGTGG 59.115 52.381 0.00 0.00 36.82 4.17
447 489 2.578786 TGCCAGCTCCATCAATATGTG 58.421 47.619 0.00 0.00 0.00 3.21
448 490 3.220110 CTTGCCAGCTCCATCAATATGT 58.780 45.455 0.00 0.00 0.00 2.29
449 491 2.030185 GCTTGCCAGCTCCATCAATATG 60.030 50.000 1.78 0.00 43.51 1.78
450 492 2.236766 GCTTGCCAGCTCCATCAATAT 58.763 47.619 1.78 0.00 43.51 1.28
451 493 1.683943 GCTTGCCAGCTCCATCAATA 58.316 50.000 1.78 0.00 43.51 1.90
452 494 1.041447 GGCTTGCCAGCTCCATCAAT 61.041 55.000 9.95 0.00 46.44 2.57
453 495 1.679977 GGCTTGCCAGCTCCATCAA 60.680 57.895 9.95 0.00 46.44 2.57
454 496 2.044650 GGCTTGCCAGCTCCATCA 60.045 61.111 9.95 0.00 46.44 3.07
455 497 3.207669 CGGCTTGCCAGCTCCATC 61.208 66.667 9.95 0.00 46.44 3.51
456 498 4.809496 CCGGCTTGCCAGCTCCAT 62.809 66.667 9.95 0.00 46.44 3.41
459 501 4.096003 TACCCGGCTTGCCAGCTC 62.096 66.667 9.95 0.00 46.44 4.09
460 502 4.410400 GTACCCGGCTTGCCAGCT 62.410 66.667 9.95 0.00 46.44 4.24
462 504 2.869503 AATCGTACCCGGCTTGCCAG 62.870 60.000 12.45 4.88 33.95 4.85
463 505 1.615165 TAATCGTACCCGGCTTGCCA 61.615 55.000 12.45 0.00 33.95 4.92
464 506 0.462403 TTAATCGTACCCGGCTTGCC 60.462 55.000 0.00 0.75 33.95 4.52
465 507 0.654160 GTTAATCGTACCCGGCTTGC 59.346 55.000 0.00 0.00 33.95 4.01
466 508 2.012937 TGTTAATCGTACCCGGCTTG 57.987 50.000 0.00 0.00 33.95 4.01
467 509 2.994186 ATGTTAATCGTACCCGGCTT 57.006 45.000 0.00 0.00 33.95 4.35
468 510 2.298163 CCTATGTTAATCGTACCCGGCT 59.702 50.000 0.00 0.00 33.95 5.52
469 511 2.680577 CCTATGTTAATCGTACCCGGC 58.319 52.381 0.00 0.00 33.95 6.13
470 512 2.611224 GGCCTATGTTAATCGTACCCGG 60.611 54.545 0.00 0.00 33.95 5.73
471 513 2.036217 TGGCCTATGTTAATCGTACCCG 59.964 50.000 3.32 0.00 0.00 5.28
472 514 3.756933 TGGCCTATGTTAATCGTACCC 57.243 47.619 3.32 0.00 0.00 3.69
473 515 5.148651 AGATGGCCTATGTTAATCGTACC 57.851 43.478 3.32 0.00 0.00 3.34
474 516 7.441458 AGAAAAGATGGCCTATGTTAATCGTAC 59.559 37.037 3.32 0.00 0.00 3.67
475 517 7.506114 AGAAAAGATGGCCTATGTTAATCGTA 58.494 34.615 3.32 0.00 0.00 3.43
476 518 6.357367 AGAAAAGATGGCCTATGTTAATCGT 58.643 36.000 3.32 0.00 0.00 3.73
477 519 6.867662 AGAAAAGATGGCCTATGTTAATCG 57.132 37.500 3.32 0.00 0.00 3.34
478 520 8.283291 CGTAAGAAAAGATGGCCTATGTTAATC 58.717 37.037 3.32 0.00 43.02 1.75
479 521 7.773690 ACGTAAGAAAAGATGGCCTATGTTAAT 59.226 33.333 3.32 0.00 43.62 1.40
480 522 7.107542 ACGTAAGAAAAGATGGCCTATGTTAA 58.892 34.615 3.32 0.00 43.62 2.01
481 523 6.646267 ACGTAAGAAAAGATGGCCTATGTTA 58.354 36.000 3.32 0.00 43.62 2.41
482 524 5.497474 ACGTAAGAAAAGATGGCCTATGTT 58.503 37.500 3.32 0.00 43.62 2.71
483 525 5.099042 ACGTAAGAAAAGATGGCCTATGT 57.901 39.130 3.32 0.00 43.62 2.29
484 526 5.175126 CGTACGTAAGAAAAGATGGCCTATG 59.825 44.000 7.22 0.00 43.62 2.23
485 527 5.287226 CGTACGTAAGAAAAGATGGCCTAT 58.713 41.667 7.22 0.00 43.62 2.57
486 528 4.675510 CGTACGTAAGAAAAGATGGCCTA 58.324 43.478 7.22 0.00 43.62 3.93
487 529 3.518590 CGTACGTAAGAAAAGATGGCCT 58.481 45.455 7.22 0.00 43.62 5.19
488 530 2.030091 GCGTACGTAAGAAAAGATGGCC 59.970 50.000 17.90 0.00 43.62 5.36
489 531 2.030091 GGCGTACGTAAGAAAAGATGGC 59.970 50.000 17.90 0.00 43.62 4.40
490 532 3.518590 AGGCGTACGTAAGAAAAGATGG 58.481 45.455 17.90 0.00 43.62 3.51
491 533 5.526010 AAAGGCGTACGTAAGAAAAGATG 57.474 39.130 17.90 0.00 43.62 2.90
492 534 5.121298 GGAAAAGGCGTACGTAAGAAAAGAT 59.879 40.000 17.90 0.00 43.62 2.40
493 535 4.448732 GGAAAAGGCGTACGTAAGAAAAGA 59.551 41.667 17.90 0.00 43.62 2.52
494 536 4.450080 AGGAAAAGGCGTACGTAAGAAAAG 59.550 41.667 17.90 0.00 43.62 2.27
495 537 4.379652 AGGAAAAGGCGTACGTAAGAAAA 58.620 39.130 17.90 0.00 43.62 2.29
496 538 3.989817 GAGGAAAAGGCGTACGTAAGAAA 59.010 43.478 17.90 0.00 43.62 2.52
497 539 3.578688 GAGGAAAAGGCGTACGTAAGAA 58.421 45.455 17.90 0.00 43.62 2.52
498 540 2.414559 CGAGGAAAAGGCGTACGTAAGA 60.415 50.000 17.90 0.00 43.62 2.10
499 541 4.508110 GACGAGGAAAAGGCGTACGTAAG 61.508 52.174 17.90 3.97 38.51 2.34
500 542 1.269448 ACGAGGAAAAGGCGTACGTAA 59.731 47.619 17.90 0.00 36.37 3.18
501 543 0.881118 ACGAGGAAAAGGCGTACGTA 59.119 50.000 17.90 0.00 36.37 3.57
502 544 0.387750 GACGAGGAAAAGGCGTACGT 60.388 55.000 17.90 0.00 38.51 3.57
503 545 1.074872 GGACGAGGAAAAGGCGTACG 61.075 60.000 11.84 11.84 38.51 3.67
504 546 0.037975 TGGACGAGGAAAAGGCGTAC 60.038 55.000 0.00 0.00 38.51 3.67
505 547 0.037975 GTGGACGAGGAAAAGGCGTA 60.038 55.000 0.00 0.00 38.51 4.42
506 548 1.301479 GTGGACGAGGAAAAGGCGT 60.301 57.895 0.00 0.00 41.45 5.68
507 549 2.380410 CGTGGACGAGGAAAAGGCG 61.380 63.158 0.00 0.00 43.02 5.52
508 550 2.677979 GCGTGGACGAGGAAAAGGC 61.678 63.158 2.73 0.00 43.02 4.35
509 551 0.602905 AAGCGTGGACGAGGAAAAGG 60.603 55.000 2.73 0.00 43.02 3.11
630 708 0.750850 ACGTACAGGACTTGCTGTGT 59.249 50.000 13.18 1.28 35.26 3.72
694 778 3.751698 ACGGTGCTGAATTTTCTAACCTC 59.248 43.478 0.00 0.00 0.00 3.85
818 902 1.003233 GGTCTGTTGGAGGAGTGGC 60.003 63.158 0.00 0.00 0.00 5.01
1170 1266 1.002502 GGTGGTGTTGTAGGCCCTC 60.003 63.158 0.00 0.00 0.00 4.30
1440 1539 0.906775 GGACGGTAGAATTGGTGGGA 59.093 55.000 0.00 0.00 0.00 4.37
1442 1541 2.629051 GAAGGACGGTAGAATTGGTGG 58.371 52.381 0.00 0.00 0.00 4.61
1524 1624 0.401356 TCAATTGGTGAGGCTGCAGA 59.599 50.000 20.43 0.00 0.00 4.26
1634 1735 9.452287 CCCCAACAATAATTCAGAATTGAAAAT 57.548 29.630 17.38 1.34 45.82 1.82
1701 1805 1.333619 AGCGAACGACAACATTTGCTT 59.666 42.857 0.00 0.00 41.84 3.91
1714 1818 2.969443 AAACTTGATCCAAGCGAACG 57.031 45.000 6.61 0.00 44.43 3.95
1763 1867 3.066621 TCAAACTTGTTGATCACAGCACC 59.933 43.478 0.00 0.00 37.00 5.01
1789 1893 5.407407 AGAGGATGTATTGTCGACAACTT 57.593 39.130 31.87 20.01 38.86 2.66
2051 2155 4.749976 CAGTTTTCCTACAGAGTAGCCTC 58.250 47.826 0.00 0.00 38.04 4.70
2060 2164 4.326826 TCTGGAATGCAGTTTTCCTACAG 58.673 43.478 16.54 7.75 42.63 2.74
2065 2169 4.590850 AACTTCTGGAATGCAGTTTTCC 57.409 40.909 10.15 10.15 42.52 3.13
2077 2181 4.220821 AGAGCGTCTTCATTAACTTCTGGA 59.779 41.667 0.00 0.00 0.00 3.86
2319 2432 2.428071 GCACTGCAAGCGAACTGC 60.428 61.111 0.00 0.00 46.98 4.40
2398 2562 1.187087 GGGACAGAGGGAGTACTGTG 58.813 60.000 0.00 0.00 45.54 3.66
2401 2565 2.715763 TTTGGGACAGAGGGAGTACT 57.284 50.000 0.00 0.00 42.39 2.73
2402 2566 5.045797 ACTTATTTTGGGACAGAGGGAGTAC 60.046 44.000 0.00 0.00 42.39 2.73
2403 2567 5.045869 CACTTATTTTGGGACAGAGGGAGTA 60.046 44.000 0.00 0.00 42.39 2.59
2404 2568 3.916989 ACTTATTTTGGGACAGAGGGAGT 59.083 43.478 0.00 0.00 42.39 3.85
2405 2569 4.263506 ACACTTATTTTGGGACAGAGGGAG 60.264 45.833 0.00 0.00 42.39 4.30
2406 2570 3.655777 ACACTTATTTTGGGACAGAGGGA 59.344 43.478 0.00 0.00 42.39 4.20
2407 2571 4.010349 GACACTTATTTTGGGACAGAGGG 58.990 47.826 0.00 0.00 42.39 4.30
2408 2572 4.911390 AGACACTTATTTTGGGACAGAGG 58.089 43.478 0.00 0.00 42.39 3.69
2409 2573 7.661847 AGTTAAGACACTTATTTTGGGACAGAG 59.338 37.037 0.00 0.00 42.39 3.35
2410 2574 7.514721 AGTTAAGACACTTATTTTGGGACAGA 58.485 34.615 0.00 0.00 42.39 3.41
2411 2575 7.745620 AGTTAAGACACTTATTTTGGGACAG 57.254 36.000 0.00 0.00 42.39 3.51
2412 2576 8.410141 CAAAGTTAAGACACTTATTTTGGGACA 58.590 33.333 0.92 0.00 35.87 4.02
2413 2577 8.410912 ACAAAGTTAAGACACTTATTTTGGGAC 58.589 33.333 19.96 6.58 35.87 4.46
2414 2578 8.528044 ACAAAGTTAAGACACTTATTTTGGGA 57.472 30.769 19.96 0.00 35.87 4.37
2415 2579 9.673454 GTACAAAGTTAAGACACTTATTTTGGG 57.327 33.333 19.96 8.06 35.87 4.12
2451 2615 7.707893 GTGTCTCAACCTTAGTACAACTTTGTA 59.292 37.037 0.00 0.00 42.35 2.41
2452 2616 6.537660 GTGTCTCAACCTTAGTACAACTTTGT 59.462 38.462 0.00 0.00 44.86 2.83
2453 2617 6.761714 AGTGTCTCAACCTTAGTACAACTTTG 59.238 38.462 0.00 0.00 0.00 2.77
2454 2618 6.885922 AGTGTCTCAACCTTAGTACAACTTT 58.114 36.000 0.00 0.00 0.00 2.66
2455 2619 6.481434 AGTGTCTCAACCTTAGTACAACTT 57.519 37.500 0.00 0.00 0.00 2.66
2456 2620 6.481434 AAGTGTCTCAACCTTAGTACAACT 57.519 37.500 0.00 0.00 0.00 3.16
2457 2621 8.828688 AATAAGTGTCTCAACCTTAGTACAAC 57.171 34.615 0.00 0.00 0.00 3.32
2458 2622 9.841295 AAAATAAGTGTCTCAACCTTAGTACAA 57.159 29.630 0.00 0.00 0.00 2.41
2459 2623 9.268268 CAAAATAAGTGTCTCAACCTTAGTACA 57.732 33.333 0.00 0.00 0.00 2.90
2460 2624 9.485206 TCAAAATAAGTGTCTCAACCTTAGTAC 57.515 33.333 0.00 0.00 0.00 2.73
2461 2625 9.706691 CTCAAAATAAGTGTCTCAACCTTAGTA 57.293 33.333 0.00 0.00 0.00 1.82
2462 2626 8.429641 TCTCAAAATAAGTGTCTCAACCTTAGT 58.570 33.333 0.00 0.00 0.00 2.24
2463 2627 8.713271 GTCTCAAAATAAGTGTCTCAACCTTAG 58.287 37.037 0.00 0.00 0.00 2.18
2464 2628 7.384115 CGTCTCAAAATAAGTGTCTCAACCTTA 59.616 37.037 0.00 0.00 0.00 2.69
2465 2629 6.202954 CGTCTCAAAATAAGTGTCTCAACCTT 59.797 38.462 0.00 0.00 0.00 3.50
2466 2630 5.696724 CGTCTCAAAATAAGTGTCTCAACCT 59.303 40.000 0.00 0.00 0.00 3.50
2467 2631 5.107065 CCGTCTCAAAATAAGTGTCTCAACC 60.107 44.000 0.00 0.00 0.00 3.77
2468 2632 5.694910 TCCGTCTCAAAATAAGTGTCTCAAC 59.305 40.000 0.00 0.00 0.00 3.18
2469 2633 5.849510 TCCGTCTCAAAATAAGTGTCTCAA 58.150 37.500 0.00 0.00 0.00 3.02
2470 2634 5.462530 TCCGTCTCAAAATAAGTGTCTCA 57.537 39.130 0.00 0.00 0.00 3.27
2471 2635 4.865365 CCTCCGTCTCAAAATAAGTGTCTC 59.135 45.833 0.00 0.00 0.00 3.36
2472 2636 4.527038 TCCTCCGTCTCAAAATAAGTGTCT 59.473 41.667 0.00 0.00 0.00 3.41
2473 2637 4.817517 TCCTCCGTCTCAAAATAAGTGTC 58.182 43.478 0.00 0.00 0.00 3.67
2474 2638 4.884668 TCCTCCGTCTCAAAATAAGTGT 57.115 40.909 0.00 0.00 0.00 3.55
2475 2639 5.238583 ACTTCCTCCGTCTCAAAATAAGTG 58.761 41.667 0.00 0.00 0.00 3.16
2476 2640 5.485209 ACTTCCTCCGTCTCAAAATAAGT 57.515 39.130 0.00 0.00 0.00 2.24
2477 2641 6.631962 AGTACTTCCTCCGTCTCAAAATAAG 58.368 40.000 0.00 0.00 0.00 1.73
2478 2642 6.600882 AGTACTTCCTCCGTCTCAAAATAA 57.399 37.500 0.00 0.00 0.00 1.40
2479 2643 7.893124 ATAGTACTTCCTCCGTCTCAAAATA 57.107 36.000 0.00 0.00 0.00 1.40
2480 2644 6.793505 ATAGTACTTCCTCCGTCTCAAAAT 57.206 37.500 0.00 0.00 0.00 1.82
2481 2645 6.600882 AATAGTACTTCCTCCGTCTCAAAA 57.399 37.500 0.00 0.00 0.00 2.44
2482 2646 6.600882 AAATAGTACTTCCTCCGTCTCAAA 57.399 37.500 0.00 0.00 0.00 2.69
2483 2647 6.350780 GGAAAATAGTACTTCCTCCGTCTCAA 60.351 42.308 0.00 0.00 38.48 3.02
2484 2648 5.126707 GGAAAATAGTACTTCCTCCGTCTCA 59.873 44.000 0.00 0.00 38.48 3.27
2485 2649 5.126707 TGGAAAATAGTACTTCCTCCGTCTC 59.873 44.000 11.68 0.00 41.52 3.36
2486 2650 5.021458 TGGAAAATAGTACTTCCTCCGTCT 58.979 41.667 11.68 0.00 41.52 4.18
2487 2651 5.334724 TGGAAAATAGTACTTCCTCCGTC 57.665 43.478 11.68 0.00 41.52 4.79
2488 2652 5.952347 ATGGAAAATAGTACTTCCTCCGT 57.048 39.130 11.68 7.20 41.52 4.69
2489 2653 6.346096 TCAATGGAAAATAGTACTTCCTCCG 58.654 40.000 11.68 1.98 41.52 4.63
2490 2654 7.339482 ACTCAATGGAAAATAGTACTTCCTCC 58.661 38.462 11.68 8.78 41.52 4.30
2491 2655 9.315525 GTACTCAATGGAAAATAGTACTTCCTC 57.684 37.037 11.68 0.44 41.52 3.71
2492 2656 8.822805 TGTACTCAATGGAAAATAGTACTTCCT 58.177 33.333 11.68 0.00 41.85 3.36
2493 2657 9.614792 ATGTACTCAATGGAAAATAGTACTTCC 57.385 33.333 0.00 2.04 41.85 3.46
2507 2671 9.091784 GTGCACTCATATATATGTACTCAATGG 57.908 37.037 19.78 4.98 35.26 3.16
2768 2933 1.074405 AGCCAATGAACTCAAGGCAGA 59.926 47.619 21.51 0.00 46.80 4.26
3047 3916 6.553100 TGTTCCCTACATCAAAAGGTGAAATT 59.447 34.615 0.00 0.00 40.50 1.82
3082 3951 8.421784 CCTACACTTAGCATTCCAGAAATACTA 58.578 37.037 0.00 0.00 0.00 1.82
3127 4000 6.873605 TGTCTTTTCATTCTTTCGATCTAGCA 59.126 34.615 0.00 0.00 0.00 3.49
3174 4047 0.246086 GGGAATGGTCGCAAAATGCA 59.754 50.000 2.99 0.00 45.36 3.96
3355 4228 3.820595 GCCAAAAAGAGGCCATGAC 57.179 52.632 5.01 0.00 46.50 3.06
3368 4241 4.724399 TGGTAAGACAAAGAGATGCCAAA 58.276 39.130 0.00 0.00 0.00 3.28
3385 4258 7.039293 TGCTGAAGAATAGTGTCTTACTGGTAA 60.039 37.037 0.00 0.00 40.65 2.85
3392 4265 9.698309 GCTATAATGCTGAAGAATAGTGTCTTA 57.302 33.333 0.00 0.00 37.98 2.10
3396 4269 7.730084 TGAGCTATAATGCTGAAGAATAGTGT 58.270 34.615 0.00 0.00 44.17 3.55
3397 4270 8.657729 CATGAGCTATAATGCTGAAGAATAGTG 58.342 37.037 0.00 0.00 44.17 2.74
3429 4302 5.752892 TGCGGTTACAAGAAAAACATGTA 57.247 34.783 0.00 0.00 32.58 2.29
3553 4429 0.609662 CCAACCAAGGCCCATGAAAG 59.390 55.000 0.00 0.00 0.00 2.62
3608 4484 5.761726 TGATGCTAAATCATGCAGTTAGAGG 59.238 40.000 13.12 0.00 42.74 3.69
3609 4485 6.856135 TGATGCTAAATCATGCAGTTAGAG 57.144 37.500 13.12 0.00 42.74 2.43
3610 4486 7.307573 CGAATGATGCTAAATCATGCAGTTAGA 60.308 37.037 13.12 0.00 42.74 2.10
3651 4530 5.191124 ACAAATATTTAGGAACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
3652 4531 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
3653 4532 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
3654 4533 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
3655 4534 7.625828 AAAGACAAATATTTAGGAACGGAGG 57.374 36.000 0.00 0.00 0.00 4.30
3672 4551 9.965824 GTCCATTTGAAATCTCTAAAAAGACAA 57.034 29.630 0.00 0.00 0.00 3.18
3673 4552 9.354673 AGTCCATTTGAAATCTCTAAAAAGACA 57.645 29.630 0.00 0.00 0.00 3.41
3677 4556 9.581289 TGGTAGTCCATTTGAAATCTCTAAAAA 57.419 29.630 0.00 0.00 39.03 1.94
3678 4557 9.010029 GTGGTAGTCCATTTGAAATCTCTAAAA 57.990 33.333 0.00 0.00 46.20 1.52
3679 4558 8.160765 TGTGGTAGTCCATTTGAAATCTCTAAA 58.839 33.333 0.00 0.00 46.20 1.85
3680 4559 7.685481 TGTGGTAGTCCATTTGAAATCTCTAA 58.315 34.615 0.00 0.00 46.20 2.10
3681 4560 7.252612 TGTGGTAGTCCATTTGAAATCTCTA 57.747 36.000 0.00 0.00 46.20 2.43
3682 4561 6.126863 TGTGGTAGTCCATTTGAAATCTCT 57.873 37.500 0.00 0.00 46.20 3.10
3683 4562 7.254455 CGTATGTGGTAGTCCATTTGAAATCTC 60.254 40.741 0.00 0.00 46.20 2.75
3684 4563 6.538742 CGTATGTGGTAGTCCATTTGAAATCT 59.461 38.462 0.00 0.00 46.20 2.40
3685 4564 6.238374 CCGTATGTGGTAGTCCATTTGAAATC 60.238 42.308 0.00 0.00 46.20 2.17
3686 4565 5.588648 CCGTATGTGGTAGTCCATTTGAAAT 59.411 40.000 0.00 0.00 46.20 2.17
3687 4566 4.938832 CCGTATGTGGTAGTCCATTTGAAA 59.061 41.667 0.00 0.00 46.20 2.69
3688 4567 4.223255 TCCGTATGTGGTAGTCCATTTGAA 59.777 41.667 0.00 0.00 46.20 2.69
3689 4568 3.770388 TCCGTATGTGGTAGTCCATTTGA 59.230 43.478 0.00 0.00 46.20 2.69
3690 4569 4.131649 TCCGTATGTGGTAGTCCATTTG 57.868 45.455 0.00 0.00 46.20 2.32
3691 4570 4.163458 ACATCCGTATGTGGTAGTCCATTT 59.837 41.667 0.00 0.00 44.79 2.32
3692 4571 3.709653 ACATCCGTATGTGGTAGTCCATT 59.290 43.478 0.00 0.00 44.79 3.16
3693 4572 3.305720 ACATCCGTATGTGGTAGTCCAT 58.694 45.455 0.00 0.00 44.79 3.41
3694 4573 2.742348 ACATCCGTATGTGGTAGTCCA 58.258 47.619 0.00 0.00 44.79 4.02
3695 4574 6.770746 ATATACATCCGTATGTGGTAGTCC 57.229 41.667 3.56 0.00 45.99 3.85
3696 4575 8.610896 GTCTATATACATCCGTATGTGGTAGTC 58.389 40.741 3.56 0.00 45.99 2.59
3697 4576 8.105197 TGTCTATATACATCCGTATGTGGTAGT 58.895 37.037 3.56 0.00 45.99 2.73
3698 4577 8.502105 TGTCTATATACATCCGTATGTGGTAG 57.498 38.462 3.56 3.93 45.99 3.18
3700 4579 7.956328 ATGTCTATATACATCCGTATGTGGT 57.044 36.000 3.56 0.00 45.99 4.16
3733 4612 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
3734 4613 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
3735 4614 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
3736 4615 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
3737 4616 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
3738 4617 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
3739 4618 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
3740 4619 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
3741 4620 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
3742 4621 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
3743 4622 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
3744 4623 5.005779 GTGACTACATACGGAGCAAAATGAG 59.994 44.000 0.00 0.00 0.00 2.90
3745 4624 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
3746 4625 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
3747 4626 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
3748 4627 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
3749 4628 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
3750 4629 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
3751 4630 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
3752 4631 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
3753 4632 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
3754 4633 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
3755 4634 6.590292 AGATTTCAACAAGTGACTACATACGG 59.410 38.462 0.00 0.00 35.39 4.02
3756 4635 7.542477 AGAGATTTCAACAAGTGACTACATACG 59.458 37.037 0.00 0.00 35.39 3.06
3757 4636 8.764524 AGAGATTTCAACAAGTGACTACATAC 57.235 34.615 0.00 0.00 35.39 2.39
3759 4638 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
3760 4639 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
3761 4640 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
3762 4641 9.698309 CTTTCTAGAGATTTCAACAAGTGACTA 57.302 33.333 0.00 0.00 35.39 2.59
3763 4642 8.424918 TCTTTCTAGAGATTTCAACAAGTGACT 58.575 33.333 0.00 0.00 35.39 3.41
3764 4643 8.491950 GTCTTTCTAGAGATTTCAACAAGTGAC 58.508 37.037 0.00 0.00 35.39 3.67
3765 4644 8.204160 TGTCTTTCTAGAGATTTCAACAAGTGA 58.796 33.333 0.00 0.00 0.00 3.41
3766 4645 8.370493 TGTCTTTCTAGAGATTTCAACAAGTG 57.630 34.615 0.00 0.00 0.00 3.16
3767 4646 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
3780 4659 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
3781 4660 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
3782 4661 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
3783 4662 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
3784 4663 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
3785 4664 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
3786 4665 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
3787 4666 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
3788 4667 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
3789 4668 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
3790 4669 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
3791 4670 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
3792 4671 8.912614 ATATACTCCCTCCGTTCCTAAATATT 57.087 34.615 0.00 0.00 0.00 1.28
3795 4674 8.912614 AATATATACTCCCTCCGTTCCTAAAT 57.087 34.615 0.00 0.00 0.00 1.40
3796 4675 9.827198 TTAATATATACTCCCTCCGTTCCTAAA 57.173 33.333 0.00 0.00 0.00 1.85
3797 4676 9.247861 GTTAATATATACTCCCTCCGTTCCTAA 57.752 37.037 0.00 0.00 0.00 2.69
3798 4677 8.393259 TGTTAATATATACTCCCTCCGTTCCTA 58.607 37.037 0.00 0.00 0.00 2.94
3799 4678 7.178097 GTGTTAATATATACTCCCTCCGTTCCT 59.822 40.741 0.00 0.00 0.00 3.36
3800 4679 7.039504 TGTGTTAATATATACTCCCTCCGTTCC 60.040 40.741 0.00 0.00 0.00 3.62
3801 4680 7.889469 TGTGTTAATATATACTCCCTCCGTTC 58.111 38.462 0.00 0.00 0.00 3.95
3802 4681 7.844493 TGTGTTAATATATACTCCCTCCGTT 57.156 36.000 0.00 0.00 0.00 4.44
3803 4682 8.431910 AATGTGTTAATATATACTCCCTCCGT 57.568 34.615 0.00 0.00 0.00 4.69
3804 4683 9.151471 CAAATGTGTTAATATATACTCCCTCCG 57.849 37.037 0.00 0.00 0.00 4.63
3805 4684 8.947115 GCAAATGTGTTAATATATACTCCCTCC 58.053 37.037 0.00 0.00 0.00 4.30
3806 4685 8.656849 CGCAAATGTGTTAATATATACTCCCTC 58.343 37.037 0.00 0.00 0.00 4.30
3807 4686 8.154856 ACGCAAATGTGTTAATATATACTCCCT 58.845 33.333 0.00 0.00 34.75 4.20
3808 4687 8.227791 CACGCAAATGTGTTAATATATACTCCC 58.772 37.037 0.00 0.00 36.50 4.30
3809 4688 7.744715 GCACGCAAATGTGTTAATATATACTCC 59.255 37.037 0.00 0.00 41.94 3.85
3810 4689 8.279800 TGCACGCAAATGTGTTAATATATACTC 58.720 33.333 0.00 0.00 41.94 2.59
3811 4690 8.148807 TGCACGCAAATGTGTTAATATATACT 57.851 30.769 0.00 0.00 41.94 2.12
3812 4691 8.839914 CATGCACGCAAATGTGTTAATATATAC 58.160 33.333 0.00 0.00 41.94 1.47
3813 4692 8.563732 ACATGCACGCAAATGTGTTAATATATA 58.436 29.630 0.00 0.00 41.94 0.86
3832 4711 1.133976 AGCTAATCCCTGGACATGCAC 60.134 52.381 0.00 0.00 0.00 4.57
3978 4868 4.251103 AGGCCCCTTACCTCTTTTTATG 57.749 45.455 0.00 0.00 28.76 1.90
4021 4911 9.107177 CATATATTCCAATATTCTGCAGACCTC 57.893 37.037 18.03 0.00 33.78 3.85
4049 4939 0.105964 AGTACGGCACAAGCTCACAA 59.894 50.000 0.00 0.00 41.70 3.33
4141 5031 4.260985 ACAACGGATCATATGCAAAGTGA 58.739 39.130 0.00 0.00 0.00 3.41
4267 5157 4.443978 TTTTTGCCCATCATCCCAAAAA 57.556 36.364 6.15 6.15 41.86 1.94
4312 5202 0.442310 CGGTAGTGACAATGGCAACG 59.558 55.000 0.00 0.00 42.51 4.10
4692 5583 8.479689 TCCTTCGATGGTATAAATTGTGAAGTA 58.520 33.333 16.29 0.00 30.91 2.24
4713 5604 3.863142 ATTGCAATGTCAGCTTCCTTC 57.137 42.857 12.09 0.00 0.00 3.46
5010 5901 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
5011 5902 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
5012 5903 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
5013 5904 8.959705 AAAAGACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
5030 5921 9.750125 GTCCATTTGAAATGTCTAAAAAGACTT 57.250 29.630 15.93 0.00 39.41 3.01
5031 5922 9.136323 AGTCCATTTGAAATGTCTAAAAAGACT 57.864 29.630 15.93 14.21 39.41 3.24
5036 5927 9.959749 GTTGTAGTCCATTTGAAATGTCTAAAA 57.040 29.630 15.93 14.59 0.00 1.52
5037 5928 9.126151 TGTTGTAGTCCATTTGAAATGTCTAAA 57.874 29.630 15.93 10.39 0.00 1.85
5038 5929 8.684386 TGTTGTAGTCCATTTGAAATGTCTAA 57.316 30.769 15.93 4.89 0.00 2.10
5039 5930 8.862325 ATGTTGTAGTCCATTTGAAATGTCTA 57.138 30.769 15.93 13.97 0.00 2.59
5040 5931 7.765695 ATGTTGTAGTCCATTTGAAATGTCT 57.234 32.000 15.93 14.81 0.00 3.41
5041 5932 7.692291 CGTATGTTGTAGTCCATTTGAAATGTC 59.308 37.037 15.93 9.10 0.00 3.06
5042 5933 7.361713 CCGTATGTTGTAGTCCATTTGAAATGT 60.362 37.037 15.93 1.43 0.00 2.71
5043 5934 6.966632 CCGTATGTTGTAGTCCATTTGAAATG 59.033 38.462 10.84 10.84 0.00 2.32
5044 5935 6.882140 TCCGTATGTTGTAGTCCATTTGAAAT 59.118 34.615 0.00 0.00 0.00 2.17
5045 5936 6.231951 TCCGTATGTTGTAGTCCATTTGAAA 58.768 36.000 0.00 0.00 0.00 2.69
5046 5937 5.795972 TCCGTATGTTGTAGTCCATTTGAA 58.204 37.500 0.00 0.00 0.00 2.69
5047 5938 5.408880 TCCGTATGTTGTAGTCCATTTGA 57.591 39.130 0.00 0.00 0.00 2.69
5048 5939 5.584649 ACATCCGTATGTTGTAGTCCATTTG 59.415 40.000 0.00 0.00 44.07 2.32
5049 5940 5.741011 ACATCCGTATGTTGTAGTCCATTT 58.259 37.500 0.00 0.00 44.07 2.32
5050 5941 5.353394 ACATCCGTATGTTGTAGTCCATT 57.647 39.130 0.00 0.00 44.07 3.16
5051 5942 6.455647 CATACATCCGTATGTTGTAGTCCAT 58.544 40.000 0.00 0.00 46.70 3.41
5052 5943 5.838529 CATACATCCGTATGTTGTAGTCCA 58.161 41.667 0.00 0.00 46.70 4.02
5091 5982 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
5092 5983 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
5093 5984 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
5094 5985 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
5095 5986 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
5096 5987 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
5097 5988 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
5098 5989 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
5099 5990 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
5100 5991 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
5101 5992 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
5102 5993 5.005779 GTGACTACATACGGAGCAAAATGAG 59.994 44.000 0.00 0.00 0.00 2.90
5103 5994 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
5104 5995 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
5105 5996 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
5106 5997 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
5107 5998 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
5108 5999 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
5109 6000 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
5110 6001 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
5111 6002 4.082408 TCCAACAAGTGACTACATACGGAG 60.082 45.833 0.00 0.00 0.00 4.63
5112 6003 3.827876 TCCAACAAGTGACTACATACGGA 59.172 43.478 0.00 0.00 0.00 4.69
5113 6004 4.182693 TCCAACAAGTGACTACATACGG 57.817 45.455 0.00 0.00 0.00 4.02
5114 6005 6.100004 AGATTCCAACAAGTGACTACATACG 58.900 40.000 0.00 0.00 0.00 3.06
5115 6006 7.324178 AGAGATTCCAACAAGTGACTACATAC 58.676 38.462 0.00 0.00 0.00 2.39
5116 6007 7.482169 AGAGATTCCAACAAGTGACTACATA 57.518 36.000 0.00 0.00 0.00 2.29
5117 6008 6.365970 AGAGATTCCAACAAGTGACTACAT 57.634 37.500 0.00 0.00 0.00 2.29
5118 6009 5.808366 AGAGATTCCAACAAGTGACTACA 57.192 39.130 0.00 0.00 0.00 2.74
5119 6010 7.159322 TCTAGAGATTCCAACAAGTGACTAC 57.841 40.000 0.00 0.00 0.00 2.73
5120 6011 7.776618 TTCTAGAGATTCCAACAAGTGACTA 57.223 36.000 0.00 0.00 0.00 2.59
5121 6012 6.672266 TTCTAGAGATTCCAACAAGTGACT 57.328 37.500 0.00 0.00 0.00 3.41
5122 6013 7.117092 GTCTTTCTAGAGATTCCAACAAGTGAC 59.883 40.741 0.00 0.00 0.00 3.67
5123 6014 7.015682 AGTCTTTCTAGAGATTCCAACAAGTGA 59.984 37.037 0.00 0.00 0.00 3.41
5124 6015 7.158021 AGTCTTTCTAGAGATTCCAACAAGTG 58.842 38.462 0.00 0.00 0.00 3.16
5125 6016 7.309770 AGTCTTTCTAGAGATTCCAACAAGT 57.690 36.000 0.00 0.00 0.00 3.16
5126 6017 9.883142 ATAAGTCTTTCTAGAGATTCCAACAAG 57.117 33.333 0.00 0.00 0.00 3.16
5137 6028 9.250624 CGTTCCCAAATATAAGTCTTTCTAGAG 57.749 37.037 0.00 0.00 0.00 2.43
5138 6029 8.202137 CCGTTCCCAAATATAAGTCTTTCTAGA 58.798 37.037 0.00 0.00 0.00 2.43
5139 6030 8.202137 TCCGTTCCCAAATATAAGTCTTTCTAG 58.798 37.037 0.00 0.00 0.00 2.43
5140 6031 8.081517 TCCGTTCCCAAATATAAGTCTTTCTA 57.918 34.615 0.00 0.00 0.00 2.10
5141 6032 6.954232 TCCGTTCCCAAATATAAGTCTTTCT 58.046 36.000 0.00 0.00 0.00 2.52
5142 6033 6.260271 CCTCCGTTCCCAAATATAAGTCTTTC 59.740 42.308 0.00 0.00 0.00 2.62
5143 6034 6.120220 CCTCCGTTCCCAAATATAAGTCTTT 58.880 40.000 0.00 0.00 0.00 2.52
5144 6035 5.397559 CCCTCCGTTCCCAAATATAAGTCTT 60.398 44.000 0.00 0.00 0.00 3.01
5145 6036 4.102681 CCCTCCGTTCCCAAATATAAGTCT 59.897 45.833 0.00 0.00 0.00 3.24
5146 6037 4.102054 TCCCTCCGTTCCCAAATATAAGTC 59.898 45.833 0.00 0.00 0.00 3.01
5147 6038 4.042174 TCCCTCCGTTCCCAAATATAAGT 58.958 43.478 0.00 0.00 0.00 2.24
5148 6039 4.102681 ACTCCCTCCGTTCCCAAATATAAG 59.897 45.833 0.00 0.00 0.00 1.73
5149 6040 4.042174 ACTCCCTCCGTTCCCAAATATAA 58.958 43.478 0.00 0.00 0.00 0.98
5150 6041 3.660959 ACTCCCTCCGTTCCCAAATATA 58.339 45.455 0.00 0.00 0.00 0.86
5151 6042 2.488836 ACTCCCTCCGTTCCCAAATAT 58.511 47.619 0.00 0.00 0.00 1.28
5152 6043 1.961133 ACTCCCTCCGTTCCCAAATA 58.039 50.000 0.00 0.00 0.00 1.40
5153 6044 1.961133 TACTCCCTCCGTTCCCAAAT 58.039 50.000 0.00 0.00 0.00 2.32
5154 6045 1.961133 ATACTCCCTCCGTTCCCAAA 58.039 50.000 0.00 0.00 0.00 3.28
5155 6046 1.835531 GAATACTCCCTCCGTTCCCAA 59.164 52.381 0.00 0.00 0.00 4.12
5156 6047 1.273381 TGAATACTCCCTCCGTTCCCA 60.273 52.381 0.00 0.00 0.00 4.37
5157 6048 1.492764 TGAATACTCCCTCCGTTCCC 58.507 55.000 0.00 0.00 0.00 3.97
5158 6049 3.840124 ATTGAATACTCCCTCCGTTCC 57.160 47.619 0.00 0.00 0.00 3.62
5159 6050 5.915175 AGTTATTGAATACTCCCTCCGTTC 58.085 41.667 0.00 0.00 0.00 3.95
5160 6051 5.952347 AGTTATTGAATACTCCCTCCGTT 57.048 39.130 0.00 0.00 0.00 4.44
5161 6052 6.553852 ACATAGTTATTGAATACTCCCTCCGT 59.446 38.462 0.00 0.00 0.00 4.69
5162 6053 6.868864 CACATAGTTATTGAATACTCCCTCCG 59.131 42.308 0.00 0.00 0.00 4.63
5163 6054 6.651225 GCACATAGTTATTGAATACTCCCTCC 59.349 42.308 0.00 0.00 0.00 4.30
5164 6055 7.445945 AGCACATAGTTATTGAATACTCCCTC 58.554 38.462 0.00 0.00 0.00 4.30
5165 6056 7.380423 AGCACATAGTTATTGAATACTCCCT 57.620 36.000 0.00 0.00 0.00 4.20
5166 6057 7.819900 CCTAGCACATAGTTATTGAATACTCCC 59.180 40.741 0.00 0.00 0.00 4.30
5167 6058 8.368668 ACCTAGCACATAGTTATTGAATACTCC 58.631 37.037 0.00 0.00 0.00 3.85
5168 6059 9.765795 AACCTAGCACATAGTTATTGAATACTC 57.234 33.333 0.00 0.00 0.00 2.59
5169 6060 9.547753 CAACCTAGCACATAGTTATTGAATACT 57.452 33.333 0.00 0.00 0.00 2.12
5170 6061 9.326413 ACAACCTAGCACATAGTTATTGAATAC 57.674 33.333 0.00 0.00 0.00 1.89
5210 6101 7.009179 ACCTACACATATCAATACCATCAGG 57.991 40.000 0.00 0.00 42.21 3.86
5226 6117 4.242475 CAGATAGTCGCAAAACCTACACA 58.758 43.478 0.00 0.00 0.00 3.72
5594 6485 3.731652 TGTTTTCAAAGCTGGATGGTG 57.268 42.857 0.00 0.00 0.00 4.17
5997 6888 0.317160 TGTCGACGCTGTTTCCAGAT 59.683 50.000 11.62 0.00 41.50 2.90
6382 7273 1.969923 TGGCCATCAAAACTCAAAGGG 59.030 47.619 0.00 0.00 0.00 3.95
6383 7274 3.967332 ATGGCCATCAAAACTCAAAGG 57.033 42.857 14.09 0.00 0.00 3.11
6384 7275 5.759273 TGAAAATGGCCATCAAAACTCAAAG 59.241 36.000 21.08 0.00 0.00 2.77
6543 7443 7.149307 GGAGTAGATAGATAGAAAACAGTGGC 58.851 42.308 0.00 0.00 0.00 5.01
6681 7582 3.160748 GGCAGAGCCCTCTCTCCC 61.161 72.222 0.00 0.00 46.32 4.30
6717 7618 0.106268 AACACATGCTGGGTGGACAA 60.106 50.000 0.00 0.00 40.54 3.18
6846 7748 2.996330 AATAGTGGTGGCAGGGGGC 61.996 63.158 0.00 0.00 43.74 5.80
6941 7843 1.742140 CAGAGCAGCAGCAGGACAG 60.742 63.158 3.17 0.00 45.49 3.51
7066 7970 3.608506 GTCGTACTGTACTCACTGCATTG 59.391 47.826 15.35 0.00 0.00 2.82
7119 8024 0.880278 CCCTGATGCGTTACGATGGG 60.880 60.000 9.62 7.68 0.00 4.00
7126 8031 0.322098 CAACCACCCCTGATGCGTTA 60.322 55.000 0.00 0.00 0.00 3.18
7157 8065 1.138266 CGACTAACCCATCCGTTCCAT 59.862 52.381 0.00 0.00 0.00 3.41
7158 8066 0.533491 CGACTAACCCATCCGTTCCA 59.467 55.000 0.00 0.00 0.00 3.53
7160 8068 1.997606 CAACGACTAACCCATCCGTTC 59.002 52.381 0.00 0.00 40.81 3.95
7162 8070 1.259609 TCAACGACTAACCCATCCGT 58.740 50.000 0.00 0.00 34.74 4.69
7164 8072 1.940613 GCATCAACGACTAACCCATCC 59.059 52.381 0.00 0.00 0.00 3.51
7165 8073 2.866762 GAGCATCAACGACTAACCCATC 59.133 50.000 0.00 0.00 33.17 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.