Multiple sequence alignment - TraesCS4D01G111900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G111900 chr4D 100.000 5870 0 0 1 5870 93066569 93072438 0.000000e+00 10840.0
1 TraesCS4D01G111900 chr4D 77.966 413 59 22 2971 3376 450332068 450331681 4.580000e-56 230.0
2 TraesCS4D01G111900 chr4A 94.631 1881 45 23 3588 5425 489433796 489431929 0.000000e+00 2863.0
3 TraesCS4D01G111900 chr4A 93.552 1799 64 23 1790 3548 489435819 489434033 0.000000e+00 2632.0
4 TraesCS4D01G111900 chr4A 94.444 1062 43 12 749 1795 489436937 489435877 0.000000e+00 1620.0
5 TraesCS4D01G111900 chr4A 88.254 630 19 25 1 590 489438027 489437413 0.000000e+00 702.0
6 TraesCS4D01G111900 chr4A 90.515 369 28 4 5506 5867 7162855 7163223 1.140000e-131 481.0
7 TraesCS4D01G111900 chr4A 77.404 416 62 18 2968 3376 16247396 16247786 9.900000e-53 219.0
8 TraesCS4D01G111900 chr4A 89.286 56 2 2 3534 3589 489434008 489433957 3.800000e-07 67.6
9 TraesCS4D01G111900 chr4B 91.545 2058 61 43 3427 5432 130625260 130627256 0.000000e+00 2732.0
10 TraesCS4D01G111900 chr4B 94.929 1617 45 17 1799 3392 130623658 130625260 0.000000e+00 2497.0
11 TraesCS4D01G111900 chr4B 97.225 865 24 0 931 1795 130622726 130623590 0.000000e+00 1465.0
12 TraesCS4D01G111900 chr4B 85.911 944 51 39 1 886 130621484 130622403 0.000000e+00 931.0
13 TraesCS4D01G111900 chr4B 91.484 364 29 2 5506 5867 75036840 75037203 3.160000e-137 499.0
14 TraesCS4D01G111900 chr4B 78.019 414 57 23 2971 3376 563628404 563628017 4.580000e-56 230.0
15 TraesCS4D01G111900 chr4B 95.652 69 3 0 5439 5507 75036747 75036815 1.730000e-20 111.0
16 TraesCS4D01G111900 chr3D 90.951 431 13 7 5439 5867 506003765 506003359 1.850000e-154 556.0
17 TraesCS4D01G111900 chr2D 94.460 361 19 1 5508 5867 189374461 189374821 6.650000e-154 555.0
18 TraesCS4D01G111900 chr2D 94.242 330 12 3 1333 1656 81515467 81515139 1.140000e-136 497.0
19 TraesCS4D01G111900 chr2D 95.455 110 5 0 3088 3197 81515148 81515039 6.050000e-40 176.0
20 TraesCS4D01G111900 chr2D 94.203 69 4 0 5439 5507 189374366 189374434 8.050000e-19 106.0
21 TraesCS4D01G111900 chr1A 90.113 354 26 6 5506 5850 557994052 557994405 8.970000e-123 451.0
22 TraesCS4D01G111900 chr1A 86.726 113 8 4 4044 4154 333135670 333135563 1.030000e-22 119.0
23 TraesCS4D01G111900 chr6B 92.025 326 13 3 1333 1655 615607840 615607525 4.170000e-121 446.0
24 TraesCS4D01G111900 chr6B 89.728 331 17 4 1333 1656 507373160 507373480 1.970000e-109 407.0
25 TraesCS4D01G111900 chr6B 97.030 101 3 0 3088 3188 507373471 507373571 2.810000e-38 171.0
26 TraesCS4D01G111900 chr6B 95.876 97 4 0 3089 3185 615607532 615607436 2.190000e-34 158.0
27 TraesCS4D01G111900 chr5B 92.025 326 13 3 1333 1655 625119812 625119497 4.170000e-121 446.0
28 TraesCS4D01G111900 chr5B 92.025 326 13 3 1333 1655 628699361 628699046 4.170000e-121 446.0
29 TraesCS4D01G111900 chr5B 93.578 109 7 0 3089 3197 625119504 625119396 4.710000e-36 163.0
30 TraesCS4D01G111900 chr5B 91.743 109 9 0 3089 3197 628699053 628698945 1.020000e-32 152.0
31 TraesCS4D01G111900 chr7A 91.589 321 14 3 1338 1655 487478230 487478540 1.170000e-116 431.0
32 TraesCS4D01G111900 chr7A 95.000 100 5 0 3089 3188 487478533 487478632 2.190000e-34 158.0
33 TraesCS4D01G111900 chr7A 83.158 95 16 0 3284 3378 8916177 8916271 2.910000e-13 87.9
34 TraesCS4D01G111900 chr7D 76.573 461 53 27 5439 5867 47110511 47110074 9.970000e-48 202.0
35 TraesCS4D01G111900 chr7D 98.333 60 1 0 4044 4103 477932153 477932212 8.050000e-19 106.0
36 TraesCS4D01G111900 chr7D 85.263 95 14 0 3284 3378 8479804 8479898 1.350000e-16 99.0
37 TraesCS4D01G111900 chr1D 86.726 113 8 4 4044 4154 269726486 269726379 1.030000e-22 119.0
38 TraesCS4D01G111900 chr1B 84.956 113 10 4 4044 4154 342973261 342973154 2.240000e-19 108.0
39 TraesCS4D01G111900 chr3B 96.721 61 2 0 4044 4104 624317594 624317534 1.040000e-17 102.0
40 TraesCS4D01G111900 chr3A 96.721 61 2 0 4044 4104 612524273 612524213 1.040000e-17 102.0
41 TraesCS4D01G111900 chr2A 96.721 61 2 0 4044 4104 138533224 138533284 1.040000e-17 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G111900 chr4D 93066569 93072438 5869 False 10840.00 10840 100.0000 1 5870 1 chr4D.!!$F1 5869
1 TraesCS4D01G111900 chr4A 489431929 489438027 6098 True 1576.92 2863 92.0334 1 5425 5 chr4A.!!$R1 5424
2 TraesCS4D01G111900 chr4B 130621484 130627256 5772 False 1906.25 2732 92.4025 1 5432 4 chr4B.!!$F2 5431

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
479 535 0.099968 GCGTTGACATCTGCATGCAT 59.900 50.000 22.97 5.92 32.57 3.96 F
484 540 0.311165 GACATCTGCATGCATCAGGC 59.689 55.000 22.97 12.16 41.79 4.85 F
900 1289 0.478507 GGGAGAGAGAGAGGGAGAGG 59.521 65.000 0.00 0.00 0.00 3.69 F
2060 2784 1.145571 AGTTGTTGGGGTAGCCAAGA 58.854 50.000 14.06 1.25 0.00 3.02 F
2548 3296 4.023193 ACCTTTAACTTTGTTGCCTGATCG 60.023 41.667 0.00 0.00 0.00 3.69 F
3394 4168 0.801251 GTGCTTCACACCATGCTCTC 59.199 55.000 0.00 0.00 44.02 3.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2060 2784 2.014010 TCCAGCAAATCAAAGGCCTT 57.986 45.000 13.78 13.78 0.00 4.35 R
2200 2928 6.884280 AACTGTAGCTGTAATTCTGCTTTT 57.116 33.333 0.00 2.97 46.51 2.27 R
2251 2979 7.820648 ACTACCAGAGCTGATTTGTAAATTTG 58.179 34.615 0.00 0.00 0.00 2.32 R
2958 3724 0.107268 TCCACCTGATCATGCCATCG 59.893 55.000 0.00 0.00 0.00 3.84 R
3990 4984 0.179029 ACCAAGCCGCAGTAACAGTT 60.179 50.000 0.00 0.00 0.00 3.16 R
4998 6024 1.697754 CCCCCAATGCCCTAGAGGT 60.698 63.158 0.00 0.00 38.26 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 72 0.120377 ATGGAAGTGGGAGGTGGGTA 59.880 55.000 0.00 0.00 0.00 3.69
213 223 7.672239 GGAGGAAAGATATATAGTCCAGTGTCT 59.328 40.741 10.10 0.00 0.00 3.41
306 316 1.163408 AGAGATACCCTCCTCCTCCC 58.837 60.000 0.00 0.00 42.97 4.30
310 320 0.942040 ATACCCTCCTCCTCCCCCTT 60.942 60.000 0.00 0.00 0.00 3.95
313 323 1.398234 CCTCCTCCTCCCCCTTCTT 59.602 63.158 0.00 0.00 0.00 2.52
315 325 0.692756 CTCCTCCTCCCCCTTCTTCC 60.693 65.000 0.00 0.00 0.00 3.46
333 343 5.151454 TCTTCCTCTTCTTCTTGTTCCTCT 58.849 41.667 0.00 0.00 0.00 3.69
344 354 3.835395 TCTTGTTCCTCTTTCCTCTCTCC 59.165 47.826 0.00 0.00 0.00 3.71
361 371 0.694783 TCCTCCCGCCTCTCTCTAGA 60.695 60.000 0.00 0.00 0.00 2.43
458 514 3.104766 CTCATGATGTGTGCCGGC 58.895 61.111 22.73 22.73 0.00 6.13
473 529 2.482374 GGCTGCGTTGACATCTGC 59.518 61.111 0.00 0.00 0.00 4.26
474 530 2.327343 GGCTGCGTTGACATCTGCA 61.327 57.895 0.00 0.00 35.75 4.41
475 531 1.651240 GGCTGCGTTGACATCTGCAT 61.651 55.000 0.00 0.00 36.64 3.96
476 532 0.522705 GCTGCGTTGACATCTGCATG 60.523 55.000 0.00 0.00 36.64 4.06
477 533 0.522705 CTGCGTTGACATCTGCATGC 60.523 55.000 11.82 11.82 36.64 4.06
478 534 1.235948 TGCGTTGACATCTGCATGCA 61.236 50.000 21.29 21.29 32.57 3.96
479 535 0.099968 GCGTTGACATCTGCATGCAT 59.900 50.000 22.97 5.92 32.57 3.96
480 536 1.858798 GCGTTGACATCTGCATGCATC 60.859 52.381 22.97 16.30 32.57 3.91
481 537 1.399089 CGTTGACATCTGCATGCATCA 59.601 47.619 22.97 18.89 32.57 3.07
482 538 2.538939 CGTTGACATCTGCATGCATCAG 60.539 50.000 22.97 15.63 32.57 2.90
483 539 1.675552 TGACATCTGCATGCATCAGG 58.324 50.000 22.97 14.95 32.57 3.86
484 540 0.311165 GACATCTGCATGCATCAGGC 59.689 55.000 22.97 12.16 41.79 4.85
604 660 3.550820 TCTCTCATCCTCTCTTCTTCCG 58.449 50.000 0.00 0.00 0.00 4.30
655 711 1.896220 GGAGTTCTTCCATGCACACA 58.104 50.000 0.00 0.00 46.01 3.72
656 712 2.440409 GGAGTTCTTCCATGCACACAT 58.560 47.619 0.00 0.00 46.01 3.21
681 737 1.340308 TGTCATGCCATGCAGCTTACT 60.340 47.619 0.00 0.00 43.65 2.24
694 750 3.055458 GCAGCTTACTTCTCTTTCCTCCT 60.055 47.826 0.00 0.00 0.00 3.69
696 752 4.466015 CAGCTTACTTCTCTTTCCTCCTCT 59.534 45.833 0.00 0.00 0.00 3.69
701 757 2.255770 TCTCTTTCCTCCTCTTCCCC 57.744 55.000 0.00 0.00 0.00 4.81
720 786 3.238597 CCCCCTCTCTTTCCTCTATCTG 58.761 54.545 0.00 0.00 0.00 2.90
721 787 2.632512 CCCCTCTCTTTCCTCTATCTGC 59.367 54.545 0.00 0.00 0.00 4.26
732 802 2.505405 CTCTATCTGCATGCATGGCTT 58.495 47.619 27.34 7.00 0.00 4.35
733 803 3.558533 CCTCTATCTGCATGCATGGCTTA 60.559 47.826 27.34 12.10 0.00 3.09
746 816 5.146298 TGCATGGCTTATGGATCCAATTTA 58.854 37.500 20.67 3.67 37.26 1.40
747 817 5.010922 TGCATGGCTTATGGATCCAATTTAC 59.989 40.000 20.67 10.17 37.26 2.01
751 1124 8.859090 CATGGCTTATGGATCCAATTTACTTTA 58.141 33.333 20.67 0.32 33.04 1.85
772 1145 8.356657 ACTTTACATGACAAATCATCCGAAAAA 58.643 29.630 0.00 0.00 44.13 1.94
776 1149 8.687824 ACATGACAAATCATCCGAAAAATTAC 57.312 30.769 0.00 0.00 44.13 1.89
777 1150 8.522830 ACATGACAAATCATCCGAAAAATTACT 58.477 29.630 0.00 0.00 44.13 2.24
778 1151 8.800972 CATGACAAATCATCCGAAAAATTACTG 58.199 33.333 0.00 0.00 44.13 2.74
779 1152 6.806249 TGACAAATCATCCGAAAAATTACTGC 59.194 34.615 0.00 0.00 0.00 4.40
780 1153 6.924111 ACAAATCATCCGAAAAATTACTGCT 58.076 32.000 0.00 0.00 0.00 4.24
781 1154 7.029563 ACAAATCATCCGAAAAATTACTGCTC 58.970 34.615 0.00 0.00 0.00 4.26
782 1155 7.094205 ACAAATCATCCGAAAAATTACTGCTCT 60.094 33.333 0.00 0.00 0.00 4.09
783 1156 5.801350 TCATCCGAAAAATTACTGCTCTG 57.199 39.130 0.00 0.00 0.00 3.35
785 1158 4.015872 TCCGAAAAATTACTGCTCTGGT 57.984 40.909 0.00 0.00 0.00 4.00
786 1159 3.751175 TCCGAAAAATTACTGCTCTGGTG 59.249 43.478 0.00 0.00 0.00 4.17
787 1160 3.751175 CCGAAAAATTACTGCTCTGGTGA 59.249 43.478 0.00 0.00 0.00 4.02
789 1162 5.447818 CCGAAAAATTACTGCTCTGGTGATC 60.448 44.000 0.00 0.00 0.00 2.92
794 1167 6.749923 AATTACTGCTCTGGTGATCTTTTC 57.250 37.500 0.00 0.00 0.00 2.29
795 1168 3.064900 ACTGCTCTGGTGATCTTTTCC 57.935 47.619 0.00 0.00 0.00 3.13
796 1169 2.290577 ACTGCTCTGGTGATCTTTTCCC 60.291 50.000 0.00 0.00 0.00 3.97
797 1170 1.004745 TGCTCTGGTGATCTTTTCCCC 59.995 52.381 0.00 0.00 0.00 4.81
811 1191 9.847224 TGATCTTTTCCCCTTCTTGTTATATAC 57.153 33.333 0.00 0.00 0.00 1.47
812 1192 8.904099 ATCTTTTCCCCTTCTTGTTATATACG 57.096 34.615 0.00 0.00 0.00 3.06
814 1194 8.980596 TCTTTTCCCCTTCTTGTTATATACGTA 58.019 33.333 0.00 0.00 0.00 3.57
818 1198 7.889469 TCCCCTTCTTGTTATATACGTATGTC 58.111 38.462 18.37 1.42 0.00 3.06
820 1200 7.256048 CCCCTTCTTGTTATATACGTATGTCCA 60.256 40.741 18.37 9.05 0.00 4.02
871 1251 1.447317 AAGCCACAACAAGCTCCACG 61.447 55.000 0.00 0.00 38.74 4.94
878 1258 1.946768 CAACAAGCTCCACGGAAGAAA 59.053 47.619 0.00 0.00 0.00 2.52
879 1259 1.884235 ACAAGCTCCACGGAAGAAAG 58.116 50.000 0.00 0.00 0.00 2.62
880 1260 1.416401 ACAAGCTCCACGGAAGAAAGA 59.584 47.619 0.00 0.00 0.00 2.52
881 1261 2.072298 CAAGCTCCACGGAAGAAAGAG 58.928 52.381 0.00 0.00 0.00 2.85
896 1285 1.994399 AAGAGGGAGAGAGAGAGGGA 58.006 55.000 0.00 0.00 0.00 4.20
898 1287 1.010793 AGAGGGAGAGAGAGAGGGAGA 59.989 57.143 0.00 0.00 0.00 3.71
900 1289 0.478507 GGGAGAGAGAGAGGGAGAGG 59.521 65.000 0.00 0.00 0.00 3.69
914 1303 5.133491 AGAGGGAGAGGGATTTATTTCAAGG 59.867 44.000 0.00 0.00 0.00 3.61
1272 1929 1.489560 GCTACAACCTGTGGACCCCT 61.490 60.000 0.00 0.00 29.57 4.79
1818 2542 6.381481 TGCTGCTTAGGAATTGTTGATATG 57.619 37.500 0.00 0.00 0.00 1.78
1829 2553 8.869109 AGGAATTGTTGATATGTTTTCCTTTGA 58.131 29.630 0.00 0.00 38.61 2.69
2060 2784 1.145571 AGTTGTTGGGGTAGCCAAGA 58.854 50.000 14.06 1.25 0.00 3.02
2200 2928 8.514330 AAACACTGACCAGTATTGTCTTTTAA 57.486 30.769 1.95 0.00 40.20 1.52
2471 3215 7.928307 TTGAGATAGGAAAAAGAACTCATGG 57.072 36.000 0.00 0.00 33.90 3.66
2548 3296 4.023193 ACCTTTAACTTTGTTGCCTGATCG 60.023 41.667 0.00 0.00 0.00 3.69
2953 3719 4.104086 TCTGAACTGGGATCTAATGTGGT 58.896 43.478 0.00 0.00 0.00 4.16
2957 3723 2.242196 ACTGGGATCTAATGTGGTTGGG 59.758 50.000 0.00 0.00 0.00 4.12
2958 3724 1.064017 TGGGATCTAATGTGGTTGGGC 60.064 52.381 0.00 0.00 0.00 5.36
2959 3725 1.308998 GGATCTAATGTGGTTGGGCG 58.691 55.000 0.00 0.00 0.00 6.13
3394 4168 0.801251 GTGCTTCACACCATGCTCTC 59.199 55.000 0.00 0.00 44.02 3.20
3410 4184 4.108336 TGCTCTCGTACTACGTACTACTG 58.892 47.826 8.42 5.08 43.14 2.74
3411 4185 4.109050 GCTCTCGTACTACGTACTACTGT 58.891 47.826 8.42 1.27 43.14 3.55
3412 4186 5.163652 TGCTCTCGTACTACGTACTACTGTA 60.164 44.000 8.42 0.43 43.14 2.74
3413 4187 5.172411 GCTCTCGTACTACGTACTACTGTAC 59.828 48.000 8.42 10.48 43.14 2.90
3419 4193 6.468319 CGTACTACGTACTACTGTACTACGTT 59.532 42.308 26.08 17.09 44.97 3.99
3423 4197 6.158175 ACGTACTACTGTACTACGTTCTTG 57.842 41.667 19.84 2.19 44.97 3.02
3567 4388 2.969628 ACAGGTGAACTCCATCGATC 57.030 50.000 0.00 0.00 0.00 3.69
3568 4389 1.135139 ACAGGTGAACTCCATCGATCG 59.865 52.381 9.36 9.36 0.00 3.69
3569 4390 1.405463 CAGGTGAACTCCATCGATCGA 59.595 52.381 21.86 21.86 0.00 3.59
3662 4649 4.071459 TGCGGTACTTGCATTGCA 57.929 50.000 7.38 7.38 37.44 4.08
3663 4650 2.565647 TGCGGTACTTGCATTGCAT 58.434 47.368 12.95 0.58 38.76 3.96
3767 4760 1.268896 CCTCCATTCGTACGTGCGTAT 60.269 52.381 24.94 18.45 32.82 3.06
3927 4920 1.949847 CTCACCAGGAGCCAGGTACG 61.950 65.000 3.05 0.00 36.69 3.67
3938 4932 3.600388 AGCCAGGTACGAAAAATCTCAG 58.400 45.455 0.00 0.00 0.00 3.35
4511 5508 3.106407 GCAGCACGACGAGGTGAC 61.106 66.667 25.09 13.88 40.38 3.67
4755 5755 3.000819 ACGGCGTTCCTCATGGGA 61.001 61.111 6.77 0.00 43.41 4.37
4877 5877 6.490381 AGAGACTTCGTGGCATAGTATGAATA 59.510 38.462 14.52 0.00 0.00 1.75
4878 5878 7.177568 AGAGACTTCGTGGCATAGTATGAATAT 59.822 37.037 14.52 0.00 0.00 1.28
4909 5925 8.883731 ACTATTACATAGCGCAATCCATTAATC 58.116 33.333 11.47 0.00 36.30 1.75
4919 5935 6.047870 CGCAATCCATTAATCAAATCCCAAA 58.952 36.000 0.00 0.00 0.00 3.28
4920 5936 6.538021 CGCAATCCATTAATCAAATCCCAAAA 59.462 34.615 0.00 0.00 0.00 2.44
4960 5976 9.693739 TCAATCAATTTAGGGCTTGTATAGAAA 57.306 29.630 0.00 0.00 0.00 2.52
4998 6024 4.749785 GCCTAGGCTGCCATTAATCCTAAA 60.750 45.833 27.17 0.00 38.26 1.85
5105 6135 5.633182 CCAAACATTTCCGGTTACAAGATTG 59.367 40.000 0.00 0.00 0.00 2.67
5178 6212 6.694445 ATGTAAAACATTGGAATTGGGGAA 57.306 33.333 0.00 0.00 34.67 3.97
5202 6237 5.595542 ACTTGGAAGTGTATGCGGTATAGTA 59.404 40.000 0.00 0.00 37.98 1.82
5234 6269 7.595819 TGGAGATTTGAGTATTGTTTTTGGT 57.404 32.000 0.00 0.00 0.00 3.67
5245 6280 8.967664 AGTATTGTTTTTGGTTACTGTACTGA 57.032 30.769 6.77 0.00 0.00 3.41
5425 6463 4.038402 ACAGTTCATTTCTGGCAGGAAAAG 59.962 41.667 13.19 8.59 38.46 2.27
5426 6464 3.575687 AGTTCATTTCTGGCAGGAAAAGG 59.424 43.478 13.19 9.49 38.46 3.11
5427 6465 3.524095 TCATTTCTGGCAGGAAAAGGA 57.476 42.857 13.19 11.72 38.46 3.36
5428 6466 3.157087 TCATTTCTGGCAGGAAAAGGAC 58.843 45.455 13.19 0.00 38.46 3.85
5432 6470 3.025322 TCTGGCAGGAAAAGGACAAAA 57.975 42.857 15.73 0.00 0.00 2.44
5433 6471 3.575805 TCTGGCAGGAAAAGGACAAAAT 58.424 40.909 15.73 0.00 0.00 1.82
5434 6472 4.735369 TCTGGCAGGAAAAGGACAAAATA 58.265 39.130 15.73 0.00 0.00 1.40
5435 6473 5.332743 TCTGGCAGGAAAAGGACAAAATAT 58.667 37.500 15.73 0.00 0.00 1.28
5436 6474 5.779771 TCTGGCAGGAAAAGGACAAAATATT 59.220 36.000 15.73 0.00 0.00 1.28
5437 6475 6.036577 TGGCAGGAAAAGGACAAAATATTC 57.963 37.500 0.00 0.00 0.00 1.75
5438 6476 5.779771 TGGCAGGAAAAGGACAAAATATTCT 59.220 36.000 0.00 0.00 0.00 2.40
5439 6477 6.951198 TGGCAGGAAAAGGACAAAATATTCTA 59.049 34.615 0.00 0.00 0.00 2.10
5440 6478 7.093945 TGGCAGGAAAAGGACAAAATATTCTAC 60.094 37.037 0.00 0.00 0.00 2.59
5441 6479 7.093945 GGCAGGAAAAGGACAAAATATTCTACA 60.094 37.037 0.00 0.00 0.00 2.74
5442 6480 7.755373 GCAGGAAAAGGACAAAATATTCTACAC 59.245 37.037 0.00 0.00 0.00 2.90
5443 6481 7.962918 CAGGAAAAGGACAAAATATTCTACACG 59.037 37.037 0.00 0.00 0.00 4.49
5444 6482 6.745907 GGAAAAGGACAAAATATTCTACACGC 59.254 38.462 0.00 0.00 0.00 5.34
5445 6483 6.811253 AAAGGACAAAATATTCTACACGCA 57.189 33.333 0.00 0.00 0.00 5.24
5446 6484 6.811253 AAGGACAAAATATTCTACACGCAA 57.189 33.333 0.00 0.00 0.00 4.85
5448 6486 6.170506 AGGACAAAATATTCTACACGCAAGA 58.829 36.000 0.00 0.00 43.62 3.02
5449 6487 6.313905 AGGACAAAATATTCTACACGCAAGAG 59.686 38.462 0.00 0.00 43.62 2.85
5450 6488 6.312918 GGACAAAATATTCTACACGCAAGAGA 59.687 38.462 0.00 0.00 43.62 3.10
5451 6489 7.011482 GGACAAAATATTCTACACGCAAGAGAT 59.989 37.037 0.00 0.00 43.62 2.75
5452 6490 7.910304 ACAAAATATTCTACACGCAAGAGATC 58.090 34.615 0.00 0.00 43.62 2.75
5453 6491 7.549134 ACAAAATATTCTACACGCAAGAGATCA 59.451 33.333 0.00 0.00 43.62 2.92
5454 6492 7.706281 AAATATTCTACACGCAAGAGATCAG 57.294 36.000 0.00 0.00 43.62 2.90
5455 6493 3.510388 TTCTACACGCAAGAGATCAGG 57.490 47.619 0.00 0.00 43.62 3.86
5456 6494 2.447443 TCTACACGCAAGAGATCAGGT 58.553 47.619 0.00 0.00 43.62 4.00
5457 6495 2.826128 TCTACACGCAAGAGATCAGGTT 59.174 45.455 0.00 0.00 43.62 3.50
5458 6496 2.086054 ACACGCAAGAGATCAGGTTC 57.914 50.000 0.00 0.00 43.62 3.62
5459 6497 0.994995 CACGCAAGAGATCAGGTTCG 59.005 55.000 0.00 0.00 43.62 3.95
5460 6498 0.737715 ACGCAAGAGATCAGGTTCGC 60.738 55.000 0.00 0.00 43.62 4.70
5461 6499 0.737367 CGCAAGAGATCAGGTTCGCA 60.737 55.000 0.00 0.00 43.02 5.10
5462 6500 1.442769 GCAAGAGATCAGGTTCGCAA 58.557 50.000 0.00 0.00 0.00 4.85
5463 6501 1.396301 GCAAGAGATCAGGTTCGCAAG 59.604 52.381 0.00 0.00 0.00 4.01
5480 6518 6.408858 TCGCAAGAAGTTCATCACTTAATC 57.591 37.500 5.50 0.00 46.53 1.75
5481 6519 5.931724 TCGCAAGAAGTTCATCACTTAATCA 59.068 36.000 5.50 0.00 46.53 2.57
5482 6520 6.091305 TCGCAAGAAGTTCATCACTTAATCAG 59.909 38.462 5.50 0.00 46.53 2.90
5483 6521 6.026513 GCAAGAAGTTCATCACTTAATCAGC 58.973 40.000 5.50 0.00 46.53 4.26
5484 6522 6.549952 CAAGAAGTTCATCACTTAATCAGCC 58.450 40.000 5.50 0.00 46.53 4.85
5485 6523 6.059787 AGAAGTTCATCACTTAATCAGCCT 57.940 37.500 5.50 0.00 46.53 4.58
5486 6524 5.879223 AGAAGTTCATCACTTAATCAGCCTG 59.121 40.000 5.50 0.00 46.53 4.85
5487 6525 3.944015 AGTTCATCACTTAATCAGCCTGC 59.056 43.478 0.00 0.00 27.32 4.85
5488 6526 3.632643 TCATCACTTAATCAGCCTGCA 57.367 42.857 0.00 0.00 0.00 4.41
5489 6527 3.954200 TCATCACTTAATCAGCCTGCAA 58.046 40.909 0.00 0.00 0.00 4.08
5490 6528 3.943381 TCATCACTTAATCAGCCTGCAAG 59.057 43.478 0.00 0.00 0.00 4.01
5491 6529 3.701205 TCACTTAATCAGCCTGCAAGA 57.299 42.857 7.31 0.00 34.07 3.02
5492 6530 3.603532 TCACTTAATCAGCCTGCAAGAG 58.396 45.455 7.31 1.39 34.07 2.85
5493 6531 3.261643 TCACTTAATCAGCCTGCAAGAGA 59.738 43.478 7.31 3.28 34.07 3.10
5494 6532 4.080695 TCACTTAATCAGCCTGCAAGAGAT 60.081 41.667 7.31 0.00 34.07 2.75
5495 6533 4.035324 CACTTAATCAGCCTGCAAGAGATG 59.965 45.833 7.31 0.00 34.07 2.90
5496 6534 2.803030 AATCAGCCTGCAAGAGATGT 57.197 45.000 0.00 0.00 34.07 3.06
5497 6535 2.328819 ATCAGCCTGCAAGAGATGTC 57.671 50.000 0.00 0.00 34.07 3.06
5498 6536 0.978907 TCAGCCTGCAAGAGATGTCA 59.021 50.000 0.00 0.00 34.07 3.58
5499 6537 1.066358 TCAGCCTGCAAGAGATGTCAG 60.066 52.381 0.00 0.00 34.07 3.51
5500 6538 0.252479 AGCCTGCAAGAGATGTCAGG 59.748 55.000 11.88 11.88 46.97 3.86
5501 6539 2.777969 CCTGCAAGAGATGTCAGGC 58.222 57.895 0.00 0.00 42.40 4.85
5502 6540 0.252479 CCTGCAAGAGATGTCAGGCT 59.748 55.000 7.18 0.00 42.40 4.58
5503 6541 1.370609 CTGCAAGAGATGTCAGGCTG 58.629 55.000 8.58 8.58 34.07 4.85
5504 6542 0.035725 TGCAAGAGATGTCAGGCTGG 60.036 55.000 15.73 0.00 0.00 4.85
5505 6543 0.251354 GCAAGAGATGTCAGGCTGGA 59.749 55.000 15.73 1.75 0.00 3.86
5506 6544 1.743091 GCAAGAGATGTCAGGCTGGAG 60.743 57.143 15.73 0.00 0.00 3.86
5507 6545 0.540923 AAGAGATGTCAGGCTGGAGC 59.459 55.000 15.73 4.58 41.14 4.70
5518 6556 1.751563 GCTGGAGCCTGAGTATCCC 59.248 63.158 0.00 0.00 34.31 3.85
5519 6557 2.045280 CTGGAGCCTGAGTATCCCG 58.955 63.158 0.00 0.00 31.73 5.14
5520 6558 2.093537 CTGGAGCCTGAGTATCCCGC 62.094 65.000 0.00 0.00 31.73 6.13
5521 6559 2.737830 GAGCCTGAGTATCCCGCC 59.262 66.667 0.00 0.00 0.00 6.13
5522 6560 1.834822 GAGCCTGAGTATCCCGCCT 60.835 63.158 0.00 0.00 0.00 5.52
5523 6561 1.811645 GAGCCTGAGTATCCCGCCTC 61.812 65.000 0.00 0.00 0.00 4.70
5524 6562 3.043419 CCTGAGTATCCCGCCTCG 58.957 66.667 0.00 0.00 0.00 4.63
5525 6563 2.336809 CTGAGTATCCCGCCTCGC 59.663 66.667 0.00 0.00 0.00 5.03
5526 6564 3.214250 CTGAGTATCCCGCCTCGCC 62.214 68.421 0.00 0.00 0.00 5.54
5527 6565 3.992317 GAGTATCCCGCCTCGCCC 61.992 72.222 0.00 0.00 0.00 6.13
5528 6566 4.541648 AGTATCCCGCCTCGCCCT 62.542 66.667 0.00 0.00 0.00 5.19
5529 6567 2.599578 GTATCCCGCCTCGCCCTA 60.600 66.667 0.00 0.00 0.00 3.53
5530 6568 2.282958 TATCCCGCCTCGCCCTAG 60.283 66.667 0.00 0.00 0.00 3.02
5531 6569 3.142770 TATCCCGCCTCGCCCTAGT 62.143 63.158 0.00 0.00 0.00 2.57
5534 6572 3.227276 CCGCCTCGCCCTAGTCAT 61.227 66.667 0.00 0.00 0.00 3.06
5535 6573 2.336809 CGCCTCGCCCTAGTCATC 59.663 66.667 0.00 0.00 0.00 2.92
5536 6574 2.490148 CGCCTCGCCCTAGTCATCA 61.490 63.158 0.00 0.00 0.00 3.07
5537 6575 1.810606 CGCCTCGCCCTAGTCATCAT 61.811 60.000 0.00 0.00 0.00 2.45
5538 6576 0.037790 GCCTCGCCCTAGTCATCATC 60.038 60.000 0.00 0.00 0.00 2.92
5539 6577 0.605589 CCTCGCCCTAGTCATCATCC 59.394 60.000 0.00 0.00 0.00 3.51
5540 6578 1.626686 CTCGCCCTAGTCATCATCCT 58.373 55.000 0.00 0.00 0.00 3.24
5541 6579 1.271934 CTCGCCCTAGTCATCATCCTG 59.728 57.143 0.00 0.00 0.00 3.86
5542 6580 0.320247 CGCCCTAGTCATCATCCTGC 60.320 60.000 0.00 0.00 0.00 4.85
5543 6581 1.055040 GCCCTAGTCATCATCCTGCT 58.945 55.000 0.00 0.00 0.00 4.24
5544 6582 1.419387 GCCCTAGTCATCATCCTGCTT 59.581 52.381 0.00 0.00 0.00 3.91
5545 6583 2.549778 GCCCTAGTCATCATCCTGCTTC 60.550 54.545 0.00 0.00 0.00 3.86
5546 6584 2.702478 CCCTAGTCATCATCCTGCTTCA 59.298 50.000 0.00 0.00 0.00 3.02
5547 6585 3.244146 CCCTAGTCATCATCCTGCTTCAG 60.244 52.174 0.00 0.00 0.00 3.02
5548 6586 2.328819 AGTCATCATCCTGCTTCAGC 57.671 50.000 0.00 0.00 42.50 4.26
5549 6587 0.935898 GTCATCATCCTGCTTCAGCG 59.064 55.000 0.00 0.00 45.83 5.18
5550 6588 0.179065 TCATCATCCTGCTTCAGCGG 60.179 55.000 0.10 0.10 45.83 5.52
5559 6597 4.394712 CTTCAGCGGGGGCGAGTT 62.395 66.667 0.00 0.00 0.00 3.01
5560 6598 3.901797 CTTCAGCGGGGGCGAGTTT 62.902 63.158 0.00 0.00 0.00 2.66
5561 6599 3.894547 TTCAGCGGGGGCGAGTTTC 62.895 63.158 0.00 0.00 0.00 2.78
5565 6603 3.702048 CGGGGGCGAGTTTCCAGA 61.702 66.667 0.00 0.00 0.00 3.86
5566 6604 2.754375 GGGGGCGAGTTTCCAGAA 59.246 61.111 0.00 0.00 0.00 3.02
5567 6605 1.303282 GGGGGCGAGTTTCCAGAAT 59.697 57.895 0.00 0.00 0.00 2.40
5568 6606 0.323451 GGGGGCGAGTTTCCAGAATT 60.323 55.000 0.00 0.00 0.00 2.17
5569 6607 1.095600 GGGGCGAGTTTCCAGAATTC 58.904 55.000 0.00 0.00 0.00 2.17
5570 6608 1.095600 GGGCGAGTTTCCAGAATTCC 58.904 55.000 0.65 0.00 0.00 3.01
5571 6609 1.613255 GGGCGAGTTTCCAGAATTCCA 60.613 52.381 0.65 0.00 0.00 3.53
5572 6610 1.740025 GGCGAGTTTCCAGAATTCCAG 59.260 52.381 0.65 0.00 0.00 3.86
5573 6611 2.427506 GCGAGTTTCCAGAATTCCAGT 58.572 47.619 0.65 0.00 0.00 4.00
5574 6612 2.814336 GCGAGTTTCCAGAATTCCAGTT 59.186 45.455 0.65 0.00 0.00 3.16
5575 6613 3.365364 GCGAGTTTCCAGAATTCCAGTTG 60.365 47.826 0.65 0.00 0.00 3.16
5576 6614 3.365364 CGAGTTTCCAGAATTCCAGTTGC 60.365 47.826 0.65 0.00 0.00 4.17
5577 6615 2.554032 AGTTTCCAGAATTCCAGTTGCG 59.446 45.455 0.65 0.00 0.00 4.85
5578 6616 0.881118 TTCCAGAATTCCAGTTGCGC 59.119 50.000 0.00 0.00 0.00 6.09
5579 6617 1.135315 CCAGAATTCCAGTTGCGCG 59.865 57.895 0.00 0.00 0.00 6.86
5580 6618 1.298157 CCAGAATTCCAGTTGCGCGA 61.298 55.000 12.10 0.00 0.00 5.87
5581 6619 0.095935 CAGAATTCCAGTTGCGCGAG 59.904 55.000 12.10 0.00 0.00 5.03
5582 6620 0.037326 AGAATTCCAGTTGCGCGAGA 60.037 50.000 12.10 0.00 0.00 4.04
5583 6621 0.796312 GAATTCCAGTTGCGCGAGAA 59.204 50.000 12.10 1.02 0.00 2.87
5584 6622 1.196808 GAATTCCAGTTGCGCGAGAAA 59.803 47.619 12.10 0.00 0.00 2.52
5585 6623 0.798776 ATTCCAGTTGCGCGAGAAAG 59.201 50.000 12.10 0.00 0.00 2.62
5586 6624 0.249699 TTCCAGTTGCGCGAGAAAGA 60.250 50.000 12.10 0.00 0.00 2.52
5587 6625 0.037326 TCCAGTTGCGCGAGAAAGAT 60.037 50.000 12.10 0.00 0.00 2.40
5588 6626 0.095935 CCAGTTGCGCGAGAAAGATG 59.904 55.000 12.10 2.77 0.00 2.90
5589 6627 0.095935 CAGTTGCGCGAGAAAGATGG 59.904 55.000 12.10 0.00 0.00 3.51
5590 6628 1.226128 GTTGCGCGAGAAAGATGGC 60.226 57.895 12.10 0.00 0.00 4.40
5591 6629 1.375908 TTGCGCGAGAAAGATGGCT 60.376 52.632 12.10 0.00 0.00 4.75
5592 6630 1.361668 TTGCGCGAGAAAGATGGCTC 61.362 55.000 12.10 0.00 0.00 4.70
5593 6631 1.520342 GCGCGAGAAAGATGGCTCT 60.520 57.895 12.10 0.00 0.00 4.09
5594 6632 1.486644 GCGCGAGAAAGATGGCTCTC 61.487 60.000 12.10 0.00 35.69 3.20
5597 6635 3.748863 GAGAAAGATGGCTCTCGCA 57.251 52.632 0.00 0.00 38.10 5.10
5598 6636 2.015736 GAGAAAGATGGCTCTCGCAA 57.984 50.000 0.00 0.00 38.10 4.85
5599 6637 2.350522 GAGAAAGATGGCTCTCGCAAA 58.649 47.619 0.00 0.00 38.10 3.68
5600 6638 2.079925 AGAAAGATGGCTCTCGCAAAC 58.920 47.619 0.00 0.00 38.10 2.93
5601 6639 0.798776 AAAGATGGCTCTCGCAAACG 59.201 50.000 0.00 0.00 42.01 3.60
5602 6640 1.639298 AAGATGGCTCTCGCAAACGC 61.639 55.000 0.00 0.00 39.84 4.84
5649 6687 4.436998 CCAGCCCTGGTCGTCGAC 62.437 72.222 17.16 17.16 45.53 4.20
5658 6696 4.180496 GTCGTCGACCATTCCCAC 57.820 61.111 14.60 0.00 0.00 4.61
5659 6697 1.590147 GTCGTCGACCATTCCCACT 59.410 57.895 14.60 0.00 0.00 4.00
5660 6698 0.037605 GTCGTCGACCATTCCCACTT 60.038 55.000 14.60 0.00 0.00 3.16
5661 6699 0.245539 TCGTCGACCATTCCCACTTC 59.754 55.000 10.58 0.00 0.00 3.01
5662 6700 0.739813 CGTCGACCATTCCCACTTCC 60.740 60.000 10.58 0.00 0.00 3.46
5663 6701 0.392595 GTCGACCATTCCCACTTCCC 60.393 60.000 3.51 0.00 0.00 3.97
5664 6702 0.838554 TCGACCATTCCCACTTCCCA 60.839 55.000 0.00 0.00 0.00 4.37
5665 6703 0.392998 CGACCATTCCCACTTCCCAG 60.393 60.000 0.00 0.00 0.00 4.45
5666 6704 0.698818 GACCATTCCCACTTCCCAGT 59.301 55.000 0.00 0.00 0.00 4.00
5667 6705 0.698818 ACCATTCCCACTTCCCAGTC 59.301 55.000 0.00 0.00 0.00 3.51
5668 6706 0.034089 CCATTCCCACTTCCCAGTCC 60.034 60.000 0.00 0.00 0.00 3.85
5669 6707 0.698238 CATTCCCACTTCCCAGTCCA 59.302 55.000 0.00 0.00 0.00 4.02
5670 6708 1.285962 CATTCCCACTTCCCAGTCCAT 59.714 52.381 0.00 0.00 0.00 3.41
5671 6709 0.698238 TTCCCACTTCCCAGTCCATG 59.302 55.000 0.00 0.00 0.00 3.66
5672 6710 1.379044 CCCACTTCCCAGTCCATGC 60.379 63.158 0.00 0.00 0.00 4.06
5673 6711 1.379044 CCACTTCCCAGTCCATGCC 60.379 63.158 0.00 0.00 0.00 4.40
5674 6712 1.379916 CACTTCCCAGTCCATGCCA 59.620 57.895 0.00 0.00 0.00 4.92
5675 6713 0.033796 CACTTCCCAGTCCATGCCAT 60.034 55.000 0.00 0.00 0.00 4.40
5676 6714 0.706433 ACTTCCCAGTCCATGCCATT 59.294 50.000 0.00 0.00 0.00 3.16
5677 6715 1.341383 ACTTCCCAGTCCATGCCATTC 60.341 52.381 0.00 0.00 0.00 2.67
5678 6716 1.002069 TTCCCAGTCCATGCCATTCT 58.998 50.000 0.00 0.00 0.00 2.40
5679 6717 0.256752 TCCCAGTCCATGCCATTCTG 59.743 55.000 0.00 0.00 0.00 3.02
5680 6718 0.754217 CCCAGTCCATGCCATTCTGG 60.754 60.000 11.24 11.24 43.46 3.86
5689 6727 4.722193 CCATTCTGGCAAGTCCGT 57.278 55.556 0.00 0.00 37.80 4.69
5690 6728 2.174334 CCATTCTGGCAAGTCCGTG 58.826 57.895 0.00 0.00 37.80 4.94
5691 6729 1.308069 CCATTCTGGCAAGTCCGTGG 61.308 60.000 0.00 0.00 37.80 4.94
5692 6730 1.675641 ATTCTGGCAAGTCCGTGGC 60.676 57.895 0.00 0.00 44.09 5.01
5697 6735 4.329545 GCAAGTCCGTGGCCCAGA 62.330 66.667 0.00 0.00 0.00 3.86
5698 6736 2.046892 CAAGTCCGTGGCCCAGAG 60.047 66.667 0.00 0.00 0.00 3.35
5699 6737 3.322466 AAGTCCGTGGCCCAGAGG 61.322 66.667 0.00 0.00 0.00 3.69
5711 6749 4.010575 CAGAGGCCGTCTGTCTCT 57.989 61.111 18.74 3.70 46.89 3.10
5712 6750 2.271940 CAGAGGCCGTCTGTCTCTT 58.728 57.895 18.74 0.00 46.89 2.85
5713 6751 0.108898 CAGAGGCCGTCTGTCTCTTG 60.109 60.000 18.74 0.00 46.89 3.02
5714 6752 0.540830 AGAGGCCGTCTGTCTCTTGT 60.541 55.000 0.00 0.00 34.55 3.16
5715 6753 1.174783 GAGGCCGTCTGTCTCTTGTA 58.825 55.000 0.00 0.00 0.00 2.41
5716 6754 0.889306 AGGCCGTCTGTCTCTTGTAC 59.111 55.000 0.00 0.00 0.00 2.90
5717 6755 0.456312 GGCCGTCTGTCTCTTGTACG 60.456 60.000 0.00 0.00 0.00 3.67
5718 6756 1.071567 GCCGTCTGTCTCTTGTACGC 61.072 60.000 0.00 0.00 32.43 4.42
5719 6757 0.240145 CCGTCTGTCTCTTGTACGCA 59.760 55.000 0.00 0.00 32.43 5.24
5720 6758 1.135373 CCGTCTGTCTCTTGTACGCAT 60.135 52.381 0.00 0.00 32.43 4.73
5721 6759 1.914051 CGTCTGTCTCTTGTACGCATG 59.086 52.381 0.00 0.00 0.00 4.06
5722 6760 1.656095 GTCTGTCTCTTGTACGCATGC 59.344 52.381 7.91 7.91 0.00 4.06
5723 6761 1.272212 TCTGTCTCTTGTACGCATGCA 59.728 47.619 19.57 0.00 0.00 3.96
5724 6762 1.657594 CTGTCTCTTGTACGCATGCAG 59.342 52.381 19.57 12.98 0.00 4.41
5725 6763 1.272212 TGTCTCTTGTACGCATGCAGA 59.728 47.619 19.57 11.36 0.00 4.26
5726 6764 1.656095 GTCTCTTGTACGCATGCAGAC 59.344 52.381 19.57 16.36 0.00 3.51
5727 6765 1.002366 CTCTTGTACGCATGCAGACC 58.998 55.000 19.57 2.53 0.00 3.85
5728 6766 0.320050 TCTTGTACGCATGCAGACCA 59.680 50.000 19.57 5.36 0.00 4.02
5729 6767 1.066215 TCTTGTACGCATGCAGACCAT 60.066 47.619 19.57 0.00 33.39 3.55
5730 6768 2.167487 TCTTGTACGCATGCAGACCATA 59.833 45.455 19.57 2.54 31.47 2.74
5731 6769 2.223537 TGTACGCATGCAGACCATAG 57.776 50.000 19.57 0.50 31.47 2.23
5732 6770 1.480545 TGTACGCATGCAGACCATAGT 59.519 47.619 19.57 7.16 31.47 2.12
5733 6771 1.860950 GTACGCATGCAGACCATAGTG 59.139 52.381 19.57 0.00 31.47 2.74
5734 6772 0.462581 ACGCATGCAGACCATAGTGG 60.463 55.000 19.57 0.00 45.02 4.00
5735 6773 1.779025 CGCATGCAGACCATAGTGGC 61.779 60.000 19.57 0.00 42.67 5.01
5736 6774 1.450531 GCATGCAGACCATAGTGGCC 61.451 60.000 14.21 0.00 42.67 5.36
5737 6775 0.107066 CATGCAGACCATAGTGGCCA 60.107 55.000 0.00 0.00 42.67 5.36
5738 6776 0.107017 ATGCAGACCATAGTGGCCAC 60.107 55.000 29.22 29.22 42.67 5.01
5739 6777 1.452108 GCAGACCATAGTGGCCACC 60.452 63.158 32.29 15.69 42.67 4.61
5740 6778 1.153369 CAGACCATAGTGGCCACCG 60.153 63.158 32.29 20.21 42.67 4.94
5741 6779 2.189521 GACCATAGTGGCCACCGG 59.810 66.667 32.29 29.24 42.67 5.28
5752 6790 2.915659 CCACCGGCGCCTATCCTA 60.916 66.667 26.68 0.00 0.00 2.94
5753 6791 2.283529 CCACCGGCGCCTATCCTAT 61.284 63.158 26.68 0.00 0.00 2.57
5754 6792 1.671742 CACCGGCGCCTATCCTATT 59.328 57.895 26.68 0.00 0.00 1.73
5755 6793 0.670546 CACCGGCGCCTATCCTATTG 60.671 60.000 26.68 4.88 0.00 1.90
5756 6794 0.830444 ACCGGCGCCTATCCTATTGA 60.830 55.000 26.68 0.00 0.00 2.57
5757 6795 0.320374 CCGGCGCCTATCCTATTGAA 59.680 55.000 26.68 0.00 0.00 2.69
5758 6796 1.673033 CCGGCGCCTATCCTATTGAAG 60.673 57.143 26.68 3.22 0.00 3.02
5759 6797 1.272490 CGGCGCCTATCCTATTGAAGA 59.728 52.381 26.68 0.00 0.00 2.87
5760 6798 2.288825 CGGCGCCTATCCTATTGAAGAA 60.289 50.000 26.68 0.00 0.00 2.52
5761 6799 3.617531 CGGCGCCTATCCTATTGAAGAAT 60.618 47.826 26.68 0.00 0.00 2.40
5762 6800 4.327680 GGCGCCTATCCTATTGAAGAATT 58.672 43.478 22.15 0.00 0.00 2.17
5763 6801 5.488341 GGCGCCTATCCTATTGAAGAATTA 58.512 41.667 22.15 0.00 0.00 1.40
5764 6802 5.582665 GGCGCCTATCCTATTGAAGAATTAG 59.417 44.000 22.15 0.00 0.00 1.73
5765 6803 5.582665 GCGCCTATCCTATTGAAGAATTAGG 59.417 44.000 0.00 0.00 0.00 2.69
5766 6804 6.702329 CGCCTATCCTATTGAAGAATTAGGT 58.298 40.000 0.00 0.00 0.00 3.08
5767 6805 7.162082 CGCCTATCCTATTGAAGAATTAGGTT 58.838 38.462 0.00 0.00 0.00 3.50
5768 6806 7.661847 CGCCTATCCTATTGAAGAATTAGGTTT 59.338 37.037 0.00 0.00 0.00 3.27
5769 6807 9.355916 GCCTATCCTATTGAAGAATTAGGTTTT 57.644 33.333 0.00 0.00 0.00 2.43
5792 6830 6.963117 TTTAGGAGAAGAATTAGGGTTCCA 57.037 37.500 0.00 0.00 0.00 3.53
5793 6831 6.561519 TTAGGAGAAGAATTAGGGTTCCAG 57.438 41.667 0.00 0.00 0.00 3.86
5794 6832 3.201045 AGGAGAAGAATTAGGGTTCCAGC 59.799 47.826 0.00 0.00 0.00 4.85
5795 6833 3.198872 GAGAAGAATTAGGGTTCCAGCG 58.801 50.000 0.00 0.00 0.00 5.18
5796 6834 2.838202 AGAAGAATTAGGGTTCCAGCGA 59.162 45.455 0.00 0.00 0.00 4.93
5797 6835 3.456277 AGAAGAATTAGGGTTCCAGCGAT 59.544 43.478 0.00 0.00 0.00 4.58
5798 6836 3.477210 AGAATTAGGGTTCCAGCGATC 57.523 47.619 0.00 0.00 0.00 3.69
5799 6837 2.135933 GAATTAGGGTTCCAGCGATCG 58.864 52.381 11.69 11.69 0.00 3.69
5800 6838 1.410004 ATTAGGGTTCCAGCGATCGA 58.590 50.000 21.57 0.00 0.00 3.59
5801 6839 0.744874 TTAGGGTTCCAGCGATCGAG 59.255 55.000 21.57 10.27 0.00 4.04
5802 6840 0.395311 TAGGGTTCCAGCGATCGAGT 60.395 55.000 21.57 1.12 0.00 4.18
5803 6841 1.227002 GGGTTCCAGCGATCGAGTC 60.227 63.158 21.57 0.32 0.00 3.36
5817 6855 3.610786 TCGAGTCGAATCTGTATCAGC 57.389 47.619 13.98 0.00 31.06 4.26
5818 6856 2.290916 TCGAGTCGAATCTGTATCAGCC 59.709 50.000 13.98 0.00 31.06 4.85
5819 6857 2.656085 GAGTCGAATCTGTATCAGCCG 58.344 52.381 5.45 0.00 0.00 5.52
5820 6858 2.025155 AGTCGAATCTGTATCAGCCGT 58.975 47.619 0.00 0.00 0.00 5.68
5821 6859 2.120232 GTCGAATCTGTATCAGCCGTG 58.880 52.381 0.00 0.00 0.00 4.94
5822 6860 2.021457 TCGAATCTGTATCAGCCGTGA 58.979 47.619 0.00 0.00 37.02 4.35
5823 6861 2.623416 TCGAATCTGTATCAGCCGTGAT 59.377 45.455 0.00 0.00 45.82 3.06
5824 6862 2.728318 CGAATCTGTATCAGCCGTGATG 59.272 50.000 0.00 0.00 43.66 3.07
5825 6863 2.160822 ATCTGTATCAGCCGTGATGC 57.839 50.000 0.00 0.00 43.66 3.91
5828 6866 3.369381 GTATCAGCCGTGATGCACT 57.631 52.632 0.00 0.00 43.66 4.40
5829 6867 0.933097 GTATCAGCCGTGATGCACTG 59.067 55.000 0.00 0.00 43.66 3.66
5830 6868 0.823460 TATCAGCCGTGATGCACTGA 59.177 50.000 5.07 5.07 43.66 3.41
5831 6869 0.179702 ATCAGCCGTGATGCACTGAT 59.820 50.000 8.92 8.92 42.19 2.90
5832 6870 0.741927 TCAGCCGTGATGCACTGATG 60.742 55.000 0.00 0.00 36.59 3.07
5833 6871 1.450848 AGCCGTGATGCACTGATGG 60.451 57.895 0.00 0.00 31.34 3.51
5834 6872 2.475466 GCCGTGATGCACTGATGGG 61.475 63.158 0.00 0.00 31.34 4.00
5835 6873 1.221566 CCGTGATGCACTGATGGGA 59.778 57.895 0.00 0.00 31.34 4.37
5836 6874 0.812811 CCGTGATGCACTGATGGGAG 60.813 60.000 0.00 0.00 31.34 4.30
5837 6875 0.176449 CGTGATGCACTGATGGGAGA 59.824 55.000 0.00 0.00 31.34 3.71
5838 6876 1.405933 CGTGATGCACTGATGGGAGAA 60.406 52.381 0.00 0.00 31.34 2.87
5839 6877 2.744166 CGTGATGCACTGATGGGAGAAT 60.744 50.000 0.00 0.00 31.34 2.40
5840 6878 3.493176 CGTGATGCACTGATGGGAGAATA 60.493 47.826 0.00 0.00 31.34 1.75
5841 6879 4.063689 GTGATGCACTGATGGGAGAATAG 58.936 47.826 0.00 0.00 0.00 1.73
5842 6880 3.713248 TGATGCACTGATGGGAGAATAGT 59.287 43.478 0.00 0.00 0.00 2.12
5843 6881 4.901250 TGATGCACTGATGGGAGAATAGTA 59.099 41.667 0.00 0.00 0.00 1.82
5844 6882 5.366477 TGATGCACTGATGGGAGAATAGTAA 59.634 40.000 0.00 0.00 0.00 2.24
5845 6883 5.894298 TGCACTGATGGGAGAATAGTAAT 57.106 39.130 0.00 0.00 0.00 1.89
5846 6884 6.994421 TGCACTGATGGGAGAATAGTAATA 57.006 37.500 0.00 0.00 0.00 0.98
5847 6885 7.373617 TGCACTGATGGGAGAATAGTAATAA 57.626 36.000 0.00 0.00 0.00 1.40
5848 6886 7.801104 TGCACTGATGGGAGAATAGTAATAAA 58.199 34.615 0.00 0.00 0.00 1.40
5849 6887 8.271458 TGCACTGATGGGAGAATAGTAATAAAA 58.729 33.333 0.00 0.00 0.00 1.52
5850 6888 9.120538 GCACTGATGGGAGAATAGTAATAAAAA 57.879 33.333 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 72 1.383803 GAGGCAGTGGAGGAGGGAT 60.384 63.158 0.00 0.00 0.00 3.85
306 316 4.632327 ACAAGAAGAAGAGGAAGAAGGG 57.368 45.455 0.00 0.00 0.00 3.95
310 320 5.151454 AGAGGAACAAGAAGAAGAGGAAGA 58.849 41.667 0.00 0.00 0.00 2.87
313 323 5.221742 GGAAAGAGGAACAAGAAGAAGAGGA 60.222 44.000 0.00 0.00 0.00 3.71
315 325 5.863965 AGGAAAGAGGAACAAGAAGAAGAG 58.136 41.667 0.00 0.00 0.00 2.85
333 343 1.686110 GGCGGGAGGAGAGAGGAAA 60.686 63.158 0.00 0.00 0.00 3.13
344 354 3.322514 CTCTAGAGAGAGGCGGGAG 57.677 63.158 15.05 0.00 44.92 4.30
361 371 8.374743 GCATATAAGAAATTTCTCCCTCTCTCT 58.625 37.037 20.71 4.96 36.28 3.10
362 372 8.153550 TGCATATAAGAAATTTCTCCCTCTCTC 58.846 37.037 20.71 7.52 36.28 3.20
363 373 8.038862 TGCATATAAGAAATTTCTCCCTCTCT 57.961 34.615 20.71 6.37 36.28 3.10
364 374 8.682936 TTGCATATAAGAAATTTCTCCCTCTC 57.317 34.615 20.71 9.97 36.28 3.20
365 375 7.230309 GCTTGCATATAAGAAATTTCTCCCTCT 59.770 37.037 20.71 7.78 36.28 3.69
369 416 7.710896 ACAGCTTGCATATAAGAAATTTCTCC 58.289 34.615 20.71 6.58 36.28 3.71
374 421 6.547141 TGCCTACAGCTTGCATATAAGAAATT 59.453 34.615 0.00 0.00 44.23 1.82
378 425 4.380531 GTGCCTACAGCTTGCATATAAGA 58.619 43.478 0.00 0.00 44.23 2.10
458 514 0.522705 GCATGCAGATGTCAACGCAG 60.523 55.000 14.21 0.00 37.88 5.18
473 529 3.587797 AACAAAGAAGCCTGATGCATG 57.412 42.857 2.46 0.00 44.83 4.06
474 530 5.726980 TTTAACAAAGAAGCCTGATGCAT 57.273 34.783 0.00 0.00 44.83 3.96
475 531 5.243507 TGATTTAACAAAGAAGCCTGATGCA 59.756 36.000 0.00 0.00 44.83 3.96
476 532 5.574443 GTGATTTAACAAAGAAGCCTGATGC 59.426 40.000 0.00 0.00 41.71 3.91
477 533 6.917533 AGTGATTTAACAAAGAAGCCTGATG 58.082 36.000 0.00 0.00 0.00 3.07
478 534 7.231317 TCAAGTGATTTAACAAAGAAGCCTGAT 59.769 33.333 0.00 0.00 0.00 2.90
479 535 6.545666 TCAAGTGATTTAACAAAGAAGCCTGA 59.454 34.615 0.00 0.00 0.00 3.86
480 536 6.738114 TCAAGTGATTTAACAAAGAAGCCTG 58.262 36.000 0.00 0.00 0.00 4.85
481 537 6.959639 TCAAGTGATTTAACAAAGAAGCCT 57.040 33.333 0.00 0.00 0.00 4.58
482 538 7.370383 TCATCAAGTGATTTAACAAAGAAGCC 58.630 34.615 0.00 0.00 31.21 4.35
483 539 8.801715 TTCATCAAGTGATTTAACAAAGAAGC 57.198 30.769 0.00 0.00 36.54 3.86
543 599 5.532406 GGAATAGGCATCAGTATCAGCAAAA 59.468 40.000 0.00 0.00 0.00 2.44
548 604 4.993584 GTGTGGAATAGGCATCAGTATCAG 59.006 45.833 0.00 0.00 0.00 2.90
658 714 1.067416 GCTGCATGGCATGACATGG 59.933 57.895 36.50 24.38 46.40 3.66
660 716 1.679680 GTAAGCTGCATGGCATGACAT 59.320 47.619 30.69 8.71 38.13 3.06
661 717 1.097232 GTAAGCTGCATGGCATGACA 58.903 50.000 30.69 23.76 38.13 3.58
662 718 1.386533 AGTAAGCTGCATGGCATGAC 58.613 50.000 30.69 20.72 38.13 3.06
663 719 2.019249 GAAGTAAGCTGCATGGCATGA 58.981 47.619 30.69 14.44 38.13 3.07
681 737 2.552367 GGGGAAGAGGAGGAAAGAGAA 58.448 52.381 0.00 0.00 0.00 2.87
701 757 3.303938 TGCAGATAGAGGAAAGAGAGGG 58.696 50.000 0.00 0.00 0.00 4.30
704 760 3.708121 TGCATGCAGATAGAGGAAAGAGA 59.292 43.478 18.46 0.00 0.00 3.10
720 786 1.203994 GGATCCATAAGCCATGCATGC 59.796 52.381 21.69 11.82 32.84 4.06
721 787 2.521126 TGGATCCATAAGCCATGCATG 58.479 47.619 20.19 20.19 32.84 4.06
732 802 9.913310 TGTCATGTAAAGTAAATTGGATCCATA 57.087 29.630 17.06 7.19 0.00 2.74
733 803 8.821686 TGTCATGTAAAGTAAATTGGATCCAT 57.178 30.769 17.06 2.96 0.00 3.41
746 816 7.447374 TTTCGGATGATTTGTCATGTAAAGT 57.553 32.000 0.00 0.00 0.00 2.66
747 817 8.741101 TTTTTCGGATGATTTGTCATGTAAAG 57.259 30.769 0.00 0.00 0.00 1.85
751 1124 8.522830 AGTAATTTTTCGGATGATTTGTCATGT 58.477 29.630 0.00 0.00 0.00 3.21
772 1145 5.189180 GGAAAAGATCACCAGAGCAGTAAT 58.811 41.667 0.00 0.00 30.99 1.89
775 1148 2.290577 GGGAAAAGATCACCAGAGCAGT 60.291 50.000 0.00 0.00 30.99 4.40
776 1149 2.363683 GGGAAAAGATCACCAGAGCAG 58.636 52.381 0.00 0.00 30.99 4.24
777 1150 2.496899 GGGAAAAGATCACCAGAGCA 57.503 50.000 0.00 0.00 30.99 4.26
785 1158 9.847224 GTATATAACAAGAAGGGGAAAAGATCA 57.153 33.333 0.00 0.00 0.00 2.92
786 1159 8.989980 CGTATATAACAAGAAGGGGAAAAGATC 58.010 37.037 0.00 0.00 0.00 2.75
787 1160 8.491958 ACGTATATAACAAGAAGGGGAAAAGAT 58.508 33.333 0.00 0.00 0.00 2.40
789 1162 9.774413 ATACGTATATAACAAGAAGGGGAAAAG 57.226 33.333 6.21 0.00 0.00 2.27
794 1167 7.095270 GGACATACGTATATAACAAGAAGGGG 58.905 42.308 7.96 0.00 0.00 4.79
795 1168 7.663827 TGGACATACGTATATAACAAGAAGGG 58.336 38.462 7.96 0.00 0.00 3.95
811 1191 4.034048 GTGCCAAGAAGTTATGGACATACG 59.966 45.833 10.62 0.00 39.12 3.06
812 1192 5.186198 AGTGCCAAGAAGTTATGGACATAC 58.814 41.667 10.62 4.60 39.12 2.39
814 1194 4.307032 AGTGCCAAGAAGTTATGGACAT 57.693 40.909 10.62 0.00 39.12 3.06
818 1198 5.712152 AAAGAAGTGCCAAGAAGTTATGG 57.288 39.130 3.31 3.31 39.80 2.74
820 1200 7.147915 TGTCAAAAAGAAGTGCCAAGAAGTTAT 60.148 33.333 0.00 0.00 0.00 1.89
824 1204 4.997565 TGTCAAAAAGAAGTGCCAAGAAG 58.002 39.130 0.00 0.00 0.00 2.85
871 1251 3.954258 CTCTCTCTCTCCCTCTTTCTTCC 59.046 52.174 0.00 0.00 0.00 3.46
878 1258 1.010793 TCTCCCTCTCTCTCTCCCTCT 59.989 57.143 0.00 0.00 0.00 3.69
879 1259 1.421646 CTCTCCCTCTCTCTCTCCCTC 59.578 61.905 0.00 0.00 0.00 4.30
880 1260 1.522900 CTCTCCCTCTCTCTCTCCCT 58.477 60.000 0.00 0.00 0.00 4.20
881 1261 0.478507 CCTCTCCCTCTCTCTCTCCC 59.521 65.000 0.00 0.00 0.00 4.30
896 1285 9.194972 GAAATTCTCCTTGAAATAAATCCCTCT 57.805 33.333 0.00 0.00 38.29 3.69
898 1287 8.899887 TGAAATTCTCCTTGAAATAAATCCCT 57.100 30.769 0.00 0.00 38.29 4.20
914 1303 6.138761 CACTTGTGCACTAACTGAAATTCTC 58.861 40.000 19.41 0.00 0.00 2.87
1782 2442 2.472695 AGCAGCAATTGGTACGAAGA 57.527 45.000 10.31 0.00 35.30 2.87
1786 2446 2.627945 TCCTAAGCAGCAATTGGTACG 58.372 47.619 10.31 0.00 36.24 3.67
1787 2447 5.105756 ACAATTCCTAAGCAGCAATTGGTAC 60.106 40.000 10.31 4.59 39.53 3.34
1826 2550 9.844257 ATTTGTCAAATATCCCTTGTTTTTCAA 57.156 25.926 9.11 0.00 34.61 2.69
2060 2784 2.014010 TCCAGCAAATCAAAGGCCTT 57.986 45.000 13.78 13.78 0.00 4.35
2169 2893 8.758829 AGACAATACTGGTCAGTGTTTATATCA 58.241 33.333 13.32 0.00 40.13 2.15
2200 2928 6.884280 AACTGTAGCTGTAATTCTGCTTTT 57.116 33.333 0.00 2.97 46.51 2.27
2251 2979 7.820648 ACTACCAGAGCTGATTTGTAAATTTG 58.179 34.615 0.00 0.00 0.00 2.32
2297 3025 9.516314 TGTCACTTTTATAATCTCTATCACACG 57.484 33.333 0.00 0.00 0.00 4.49
2935 3701 3.309121 CCCAACCACATTAGATCCCAGTT 60.309 47.826 0.00 0.00 0.00 3.16
2953 3719 0.820482 CTGATCATGCCATCGCCCAA 60.820 55.000 0.00 0.00 0.00 4.12
2957 3723 1.512996 CCACCTGATCATGCCATCGC 61.513 60.000 0.00 0.00 0.00 4.58
2958 3724 0.107268 TCCACCTGATCATGCCATCG 59.893 55.000 0.00 0.00 0.00 3.84
2959 3725 1.893544 CTCCACCTGATCATGCCATC 58.106 55.000 0.00 0.00 0.00 3.51
3215 3985 3.420214 GATGTACCGGAGCCGCGAA 62.420 63.158 9.46 0.00 38.24 4.70
3218 3988 3.896133 TCGATGTACCGGAGCCGC 61.896 66.667 9.46 0.00 38.24 6.53
3270 4040 1.000646 TGCTCTGCATCATGCCCAA 60.001 52.632 7.30 0.00 44.23 4.12
3410 4184 7.218963 CGGTAAAGTTATCCAAGAACGTAGTAC 59.781 40.741 0.00 0.00 45.00 2.73
3411 4185 7.250569 CGGTAAAGTTATCCAAGAACGTAGTA 58.749 38.462 0.00 0.00 45.00 1.82
3413 4187 5.005107 GCGGTAAAGTTATCCAAGAACGTAG 59.995 44.000 0.00 0.00 31.85 3.51
3419 4193 3.985019 TGGCGGTAAAGTTATCCAAGA 57.015 42.857 0.00 0.00 0.00 3.02
3467 4249 7.645340 CCTTATAATCCGAAACAATTCAAGCAG 59.355 37.037 0.00 0.00 35.15 4.24
3659 4646 5.048154 GCTATGTCTATGTCTCTCTCATGCA 60.048 44.000 0.00 0.00 0.00 3.96
3660 4647 5.048154 TGCTATGTCTATGTCTCTCTCATGC 60.048 44.000 0.00 0.00 0.00 4.06
3661 4648 6.380995 GTGCTATGTCTATGTCTCTCTCATG 58.619 44.000 0.00 0.00 0.00 3.07
3662 4649 5.181056 CGTGCTATGTCTATGTCTCTCTCAT 59.819 44.000 0.00 0.00 0.00 2.90
3663 4650 4.513318 CGTGCTATGTCTATGTCTCTCTCA 59.487 45.833 0.00 0.00 0.00 3.27
3735 4728 3.952508 TGGAGGTGCCATGCGTGT 61.953 61.111 4.96 0.00 43.33 4.49
3767 4760 1.818363 TTTTGGGCGTGCACGTACA 60.818 52.632 36.80 31.01 42.22 2.90
3927 4920 5.416952 TGAAGAAGGATGGCTGAGATTTTTC 59.583 40.000 0.00 0.00 0.00 2.29
3938 4932 3.379688 GGATCAAACTGAAGAAGGATGGC 59.620 47.826 0.00 0.00 0.00 4.40
3990 4984 0.179029 ACCAAGCCGCAGTAACAGTT 60.179 50.000 0.00 0.00 0.00 3.16
3999 4994 2.331893 CGGATCAAACCAAGCCGCA 61.332 57.895 0.00 0.00 35.17 5.69
4998 6024 1.697754 CCCCCAATGCCCTAGAGGT 60.698 63.158 0.00 0.00 38.26 3.85
5105 6135 2.509964 CCATCCCCCTATTGCCCTATAC 59.490 54.545 0.00 0.00 0.00 1.47
5178 6212 3.906720 ATACCGCATACACTTCCAAGT 57.093 42.857 0.00 0.00 40.60 3.16
5202 6237 9.533831 AACAATACTCAAATCTCCAATAAACCT 57.466 29.630 0.00 0.00 0.00 3.50
5415 6453 6.286240 AGAATATTTTGTCCTTTTCCTGCC 57.714 37.500 0.00 0.00 0.00 4.85
5425 6463 6.312918 TCTCTTGCGTGTAGAATATTTTGTCC 59.687 38.462 0.00 0.00 0.00 4.02
5426 6464 7.290857 TCTCTTGCGTGTAGAATATTTTGTC 57.709 36.000 0.00 0.00 0.00 3.18
5427 6465 7.549134 TGATCTCTTGCGTGTAGAATATTTTGT 59.451 33.333 0.00 0.00 0.00 2.83
5428 6466 7.909267 TGATCTCTTGCGTGTAGAATATTTTG 58.091 34.615 0.00 0.00 0.00 2.44
5432 6470 5.303078 ACCTGATCTCTTGCGTGTAGAATAT 59.697 40.000 0.00 0.00 0.00 1.28
5433 6471 4.645136 ACCTGATCTCTTGCGTGTAGAATA 59.355 41.667 0.00 0.00 0.00 1.75
5434 6472 3.449018 ACCTGATCTCTTGCGTGTAGAAT 59.551 43.478 0.00 0.00 0.00 2.40
5435 6473 2.826128 ACCTGATCTCTTGCGTGTAGAA 59.174 45.455 0.00 0.00 0.00 2.10
5436 6474 2.447443 ACCTGATCTCTTGCGTGTAGA 58.553 47.619 0.00 0.00 0.00 2.59
5437 6475 2.949451 ACCTGATCTCTTGCGTGTAG 57.051 50.000 0.00 0.00 0.00 2.74
5438 6476 2.415491 CGAACCTGATCTCTTGCGTGTA 60.415 50.000 0.00 0.00 0.00 2.90
5439 6477 1.670087 CGAACCTGATCTCTTGCGTGT 60.670 52.381 0.00 0.00 0.00 4.49
5440 6478 0.994995 CGAACCTGATCTCTTGCGTG 59.005 55.000 0.00 0.00 0.00 5.34
5441 6479 0.737715 GCGAACCTGATCTCTTGCGT 60.738 55.000 0.00 0.00 0.00 5.24
5442 6480 0.737367 TGCGAACCTGATCTCTTGCG 60.737 55.000 0.00 0.00 0.00 4.85
5443 6481 1.396301 CTTGCGAACCTGATCTCTTGC 59.604 52.381 0.00 0.00 0.00 4.01
5444 6482 2.964740 TCTTGCGAACCTGATCTCTTG 58.035 47.619 0.00 0.00 0.00 3.02
5445 6483 3.007398 ACTTCTTGCGAACCTGATCTCTT 59.993 43.478 0.00 0.00 0.00 2.85
5446 6484 2.564947 ACTTCTTGCGAACCTGATCTCT 59.435 45.455 0.00 0.00 0.00 3.10
5447 6485 2.966050 ACTTCTTGCGAACCTGATCTC 58.034 47.619 0.00 0.00 0.00 2.75
5448 6486 3.244215 TGAACTTCTTGCGAACCTGATCT 60.244 43.478 0.00 0.00 0.00 2.75
5449 6487 3.067106 TGAACTTCTTGCGAACCTGATC 58.933 45.455 0.00 0.00 0.00 2.92
5450 6488 3.126001 TGAACTTCTTGCGAACCTGAT 57.874 42.857 0.00 0.00 0.00 2.90
5451 6489 2.613026 TGAACTTCTTGCGAACCTGA 57.387 45.000 0.00 0.00 0.00 3.86
5452 6490 2.807967 TGATGAACTTCTTGCGAACCTG 59.192 45.455 0.00 0.00 0.00 4.00
5453 6491 2.808543 GTGATGAACTTCTTGCGAACCT 59.191 45.455 0.00 0.00 0.00 3.50
5454 6492 2.808543 AGTGATGAACTTCTTGCGAACC 59.191 45.455 0.00 0.00 34.57 3.62
5455 6493 4.474226 AAGTGATGAACTTCTTGCGAAC 57.526 40.909 0.00 0.00 46.60 3.95
5456 6494 6.426633 TGATTAAGTGATGAACTTCTTGCGAA 59.573 34.615 0.00 0.00 46.60 4.70
5457 6495 5.931724 TGATTAAGTGATGAACTTCTTGCGA 59.068 36.000 0.00 0.00 46.60 5.10
5458 6496 6.169419 TGATTAAGTGATGAACTTCTTGCG 57.831 37.500 0.00 0.00 46.60 4.85
5459 6497 6.026513 GCTGATTAAGTGATGAACTTCTTGC 58.973 40.000 0.00 0.00 46.60 4.01
5460 6498 6.373774 AGGCTGATTAAGTGATGAACTTCTTG 59.626 38.462 0.00 0.00 46.60 3.02
5461 6499 6.373774 CAGGCTGATTAAGTGATGAACTTCTT 59.626 38.462 9.42 0.00 46.60 2.52
5462 6500 5.879223 CAGGCTGATTAAGTGATGAACTTCT 59.121 40.000 9.42 0.00 46.60 2.85
5463 6501 5.448360 GCAGGCTGATTAAGTGATGAACTTC 60.448 44.000 20.86 0.00 46.60 3.01
5465 6503 3.944015 GCAGGCTGATTAAGTGATGAACT 59.056 43.478 20.86 0.00 42.60 3.01
5466 6504 3.691118 TGCAGGCTGATTAAGTGATGAAC 59.309 43.478 20.86 0.00 0.00 3.18
5467 6505 3.954200 TGCAGGCTGATTAAGTGATGAA 58.046 40.909 20.86 0.00 0.00 2.57
5468 6506 3.632643 TGCAGGCTGATTAAGTGATGA 57.367 42.857 20.86 0.00 0.00 2.92
5469 6507 3.943381 TCTTGCAGGCTGATTAAGTGATG 59.057 43.478 20.86 0.00 0.00 3.07
5470 6508 4.080695 TCTCTTGCAGGCTGATTAAGTGAT 60.081 41.667 20.86 0.00 0.00 3.06
5471 6509 3.261643 TCTCTTGCAGGCTGATTAAGTGA 59.738 43.478 20.86 19.34 0.00 3.41
5472 6510 3.603532 TCTCTTGCAGGCTGATTAAGTG 58.396 45.455 20.86 17.61 0.00 3.16
5473 6511 3.988976 TCTCTTGCAGGCTGATTAAGT 57.011 42.857 20.86 0.00 0.00 2.24
5474 6512 4.197750 ACATCTCTTGCAGGCTGATTAAG 58.802 43.478 20.86 17.72 0.00 1.85
5475 6513 4.194640 GACATCTCTTGCAGGCTGATTAA 58.805 43.478 20.86 8.80 0.00 1.40
5476 6514 3.198417 TGACATCTCTTGCAGGCTGATTA 59.802 43.478 20.86 0.00 0.00 1.75
5477 6515 2.026542 TGACATCTCTTGCAGGCTGATT 60.027 45.455 20.86 0.00 0.00 2.57
5478 6516 1.558294 TGACATCTCTTGCAGGCTGAT 59.442 47.619 20.86 0.00 0.00 2.90
5479 6517 0.978907 TGACATCTCTTGCAGGCTGA 59.021 50.000 20.86 0.00 0.00 4.26
5480 6518 1.370609 CTGACATCTCTTGCAGGCTG 58.629 55.000 10.94 10.94 0.00 4.85
5481 6519 0.252479 CCTGACATCTCTTGCAGGCT 59.748 55.000 0.00 0.00 40.39 4.58
5482 6520 2.777969 CCTGACATCTCTTGCAGGC 58.222 57.895 0.00 0.00 40.39 4.85
5483 6521 0.252479 AGCCTGACATCTCTTGCAGG 59.748 55.000 0.00 0.00 45.16 4.85
5484 6522 1.370609 CAGCCTGACATCTCTTGCAG 58.629 55.000 0.00 0.00 32.55 4.41
5485 6523 0.035725 CCAGCCTGACATCTCTTGCA 60.036 55.000 0.00 0.00 0.00 4.08
5486 6524 0.251354 TCCAGCCTGACATCTCTTGC 59.749 55.000 0.00 0.00 0.00 4.01
5487 6525 1.743091 GCTCCAGCCTGACATCTCTTG 60.743 57.143 0.00 0.00 34.31 3.02
5488 6526 0.540923 GCTCCAGCCTGACATCTCTT 59.459 55.000 0.00 0.00 34.31 2.85
5489 6527 2.210424 GCTCCAGCCTGACATCTCT 58.790 57.895 0.00 0.00 34.31 3.10
5490 6528 4.852962 GCTCCAGCCTGACATCTC 57.147 61.111 0.00 0.00 34.31 2.75
5500 6538 1.751563 GGGATACTCAGGCTCCAGC 59.248 63.158 0.00 0.00 41.14 4.85
5501 6539 2.045280 CGGGATACTCAGGCTCCAG 58.955 63.158 0.00 0.00 0.00 3.86
5502 6540 2.134287 GCGGGATACTCAGGCTCCA 61.134 63.158 0.00 0.00 0.00 3.86
5503 6541 2.737830 GCGGGATACTCAGGCTCC 59.262 66.667 0.00 0.00 0.00 4.70
5504 6542 1.811645 GAGGCGGGATACTCAGGCTC 61.812 65.000 2.30 2.30 44.76 4.70
5505 6543 1.834822 GAGGCGGGATACTCAGGCT 60.835 63.158 0.00 0.00 41.85 4.58
5506 6544 2.737830 GAGGCGGGATACTCAGGC 59.262 66.667 0.00 0.00 33.95 4.85
5507 6545 3.043419 CGAGGCGGGATACTCAGG 58.957 66.667 0.00 0.00 33.36 3.86
5508 6546 2.336809 GCGAGGCGGGATACTCAG 59.663 66.667 0.00 0.00 33.36 3.35
5509 6547 3.224324 GGCGAGGCGGGATACTCA 61.224 66.667 0.00 0.00 33.36 3.41
5510 6548 3.992317 GGGCGAGGCGGGATACTC 61.992 72.222 0.00 0.00 0.00 2.59
5511 6549 3.142770 TAGGGCGAGGCGGGATACT 62.143 63.158 0.00 0.00 0.00 2.12
5512 6550 2.599578 TAGGGCGAGGCGGGATAC 60.600 66.667 0.00 0.00 0.00 2.24
5513 6551 2.282958 CTAGGGCGAGGCGGGATA 60.283 66.667 0.00 0.00 0.00 2.59
5514 6552 4.541648 ACTAGGGCGAGGCGGGAT 62.542 66.667 0.00 0.00 0.00 3.85
5517 6555 3.214250 GATGACTAGGGCGAGGCGG 62.214 68.421 0.00 0.00 0.00 6.13
5518 6556 1.810606 ATGATGACTAGGGCGAGGCG 61.811 60.000 0.00 0.00 0.00 5.52
5519 6557 0.037790 GATGATGACTAGGGCGAGGC 60.038 60.000 0.00 0.00 0.00 4.70
5520 6558 0.605589 GGATGATGACTAGGGCGAGG 59.394 60.000 0.00 0.00 0.00 4.63
5521 6559 1.271934 CAGGATGATGACTAGGGCGAG 59.728 57.143 0.00 0.00 39.69 5.03
5522 6560 1.332195 CAGGATGATGACTAGGGCGA 58.668 55.000 0.00 0.00 39.69 5.54
5523 6561 0.320247 GCAGGATGATGACTAGGGCG 60.320 60.000 0.00 0.00 39.69 6.13
5524 6562 1.055040 AGCAGGATGATGACTAGGGC 58.945 55.000 0.00 0.00 39.69 5.19
5525 6563 2.702478 TGAAGCAGGATGATGACTAGGG 59.298 50.000 0.00 0.00 39.69 3.53
5526 6564 3.803021 GCTGAAGCAGGATGATGACTAGG 60.803 52.174 0.00 0.00 39.69 3.02
5527 6565 3.391965 GCTGAAGCAGGATGATGACTAG 58.608 50.000 0.00 0.00 39.69 2.57
5528 6566 2.223900 CGCTGAAGCAGGATGATGACTA 60.224 50.000 2.79 0.00 39.69 2.59
5529 6567 1.472904 CGCTGAAGCAGGATGATGACT 60.473 52.381 2.79 0.00 39.69 3.41
5530 6568 0.935898 CGCTGAAGCAGGATGATGAC 59.064 55.000 2.79 0.00 39.69 3.06
5531 6569 0.179065 CCGCTGAAGCAGGATGATGA 60.179 55.000 2.79 0.00 39.69 2.92
5532 6570 1.164662 CCCGCTGAAGCAGGATGATG 61.165 60.000 12.72 0.00 41.04 3.07
5533 6571 1.147824 CCCGCTGAAGCAGGATGAT 59.852 57.895 12.72 0.00 41.04 2.45
5534 6572 2.586245 CCCGCTGAAGCAGGATGA 59.414 61.111 12.72 0.00 41.04 2.92
5535 6573 2.515523 CCCCGCTGAAGCAGGATG 60.516 66.667 6.12 0.00 41.04 3.51
5536 6574 3.801997 CCCCCGCTGAAGCAGGAT 61.802 66.667 6.12 0.00 41.04 3.24
5542 6580 3.901797 AAACTCGCCCCCGCTGAAG 62.902 63.158 0.00 0.00 0.00 3.02
5543 6581 3.894547 GAAACTCGCCCCCGCTGAA 62.895 63.158 0.00 0.00 0.00 3.02
5544 6582 4.388499 GAAACTCGCCCCCGCTGA 62.388 66.667 0.00 0.00 0.00 4.26
5548 6586 2.536997 ATTCTGGAAACTCGCCCCCG 62.537 60.000 0.00 0.00 0.00 5.73
5549 6587 0.323451 AATTCTGGAAACTCGCCCCC 60.323 55.000 0.00 0.00 0.00 5.40
5550 6588 1.095600 GAATTCTGGAAACTCGCCCC 58.904 55.000 0.00 0.00 0.00 5.80
5551 6589 1.095600 GGAATTCTGGAAACTCGCCC 58.904 55.000 5.23 0.00 0.00 6.13
5552 6590 1.740025 CTGGAATTCTGGAAACTCGCC 59.260 52.381 5.23 0.00 0.00 5.54
5553 6591 2.427506 ACTGGAATTCTGGAAACTCGC 58.572 47.619 5.23 0.00 0.00 5.03
5554 6592 3.365364 GCAACTGGAATTCTGGAAACTCG 60.365 47.826 5.23 0.00 0.00 4.18
5555 6593 3.365364 CGCAACTGGAATTCTGGAAACTC 60.365 47.826 5.23 0.00 0.00 3.01
5556 6594 2.554032 CGCAACTGGAATTCTGGAAACT 59.446 45.455 5.23 0.00 0.00 2.66
5557 6595 2.922335 GCGCAACTGGAATTCTGGAAAC 60.922 50.000 0.30 0.00 0.00 2.78
5558 6596 1.269448 GCGCAACTGGAATTCTGGAAA 59.731 47.619 0.30 0.00 0.00 3.13
5559 6597 0.881118 GCGCAACTGGAATTCTGGAA 59.119 50.000 0.30 0.00 0.00 3.53
5560 6598 1.298157 CGCGCAACTGGAATTCTGGA 61.298 55.000 8.75 0.00 0.00 3.86
5561 6599 1.135315 CGCGCAACTGGAATTCTGG 59.865 57.895 8.75 1.28 0.00 3.86
5562 6600 0.095935 CTCGCGCAACTGGAATTCTG 59.904 55.000 8.75 1.62 0.00 3.02
5563 6601 0.037326 TCTCGCGCAACTGGAATTCT 60.037 50.000 8.75 0.00 0.00 2.40
5564 6602 0.796312 TTCTCGCGCAACTGGAATTC 59.204 50.000 8.75 0.00 0.00 2.17
5565 6603 1.197721 CTTTCTCGCGCAACTGGAATT 59.802 47.619 8.75 0.00 0.00 2.17
5566 6604 0.798776 CTTTCTCGCGCAACTGGAAT 59.201 50.000 8.75 0.00 0.00 3.01
5567 6605 0.249699 TCTTTCTCGCGCAACTGGAA 60.250 50.000 8.75 0.66 0.00 3.53
5568 6606 0.037326 ATCTTTCTCGCGCAACTGGA 60.037 50.000 8.75 0.00 0.00 3.86
5569 6607 0.095935 CATCTTTCTCGCGCAACTGG 59.904 55.000 8.75 0.00 0.00 4.00
5570 6608 0.095935 CCATCTTTCTCGCGCAACTG 59.904 55.000 8.75 0.00 0.00 3.16
5571 6609 1.639298 GCCATCTTTCTCGCGCAACT 61.639 55.000 8.75 0.00 0.00 3.16
5572 6610 1.226128 GCCATCTTTCTCGCGCAAC 60.226 57.895 8.75 0.00 0.00 4.17
5573 6611 1.361668 GAGCCATCTTTCTCGCGCAA 61.362 55.000 8.75 0.00 0.00 4.85
5574 6612 1.811266 GAGCCATCTTTCTCGCGCA 60.811 57.895 8.75 0.00 0.00 6.09
5575 6613 1.486644 GAGAGCCATCTTTCTCGCGC 61.487 60.000 0.00 0.00 35.30 6.86
5576 6614 2.587574 GAGAGCCATCTTTCTCGCG 58.412 57.895 0.00 0.00 35.30 5.87
5641 6679 0.037605 AAGTGGGAATGGTCGACGAC 60.038 55.000 19.70 19.70 0.00 4.34
5642 6680 0.245539 GAAGTGGGAATGGTCGACGA 59.754 55.000 9.92 5.99 0.00 4.20
5643 6681 0.739813 GGAAGTGGGAATGGTCGACG 60.740 60.000 9.92 0.00 0.00 5.12
5644 6682 0.392595 GGGAAGTGGGAATGGTCGAC 60.393 60.000 7.13 7.13 0.00 4.20
5645 6683 0.838554 TGGGAAGTGGGAATGGTCGA 60.839 55.000 0.00 0.00 0.00 4.20
5646 6684 0.392998 CTGGGAAGTGGGAATGGTCG 60.393 60.000 0.00 0.00 0.00 4.79
5647 6685 0.698818 ACTGGGAAGTGGGAATGGTC 59.301 55.000 0.00 0.00 0.00 4.02
5648 6686 0.698818 GACTGGGAAGTGGGAATGGT 59.301 55.000 0.00 0.00 0.00 3.55
5649 6687 0.034089 GGACTGGGAAGTGGGAATGG 60.034 60.000 0.00 0.00 0.00 3.16
5650 6688 0.698238 TGGACTGGGAAGTGGGAATG 59.302 55.000 0.00 0.00 0.00 2.67
5651 6689 1.285962 CATGGACTGGGAAGTGGGAAT 59.714 52.381 0.00 0.00 0.00 3.01
5652 6690 0.698238 CATGGACTGGGAAGTGGGAA 59.302 55.000 0.00 0.00 0.00 3.97
5653 6691 1.852157 GCATGGACTGGGAAGTGGGA 61.852 60.000 0.00 0.00 0.00 4.37
5654 6692 1.379044 GCATGGACTGGGAAGTGGG 60.379 63.158 0.00 0.00 0.00 4.61
5655 6693 1.379044 GGCATGGACTGGGAAGTGG 60.379 63.158 0.00 0.00 0.00 4.00
5656 6694 0.033796 ATGGCATGGACTGGGAAGTG 60.034 55.000 0.00 0.00 0.00 3.16
5657 6695 0.706433 AATGGCATGGACTGGGAAGT 59.294 50.000 0.00 0.00 0.00 3.01
5658 6696 1.064166 AGAATGGCATGGACTGGGAAG 60.064 52.381 0.00 0.00 0.00 3.46
5659 6697 1.002069 AGAATGGCATGGACTGGGAA 58.998 50.000 0.00 0.00 0.00 3.97
5660 6698 0.256752 CAGAATGGCATGGACTGGGA 59.743 55.000 16.49 0.00 0.00 4.37
5661 6699 2.803203 CAGAATGGCATGGACTGGG 58.197 57.895 16.49 0.00 0.00 4.45
5673 6711 1.926511 GCCACGGACTTGCCAGAATG 61.927 60.000 0.00 0.00 35.94 2.67
5674 6712 1.675641 GCCACGGACTTGCCAGAAT 60.676 57.895 0.00 0.00 35.94 2.40
5675 6713 2.281484 GCCACGGACTTGCCAGAA 60.281 61.111 0.00 0.00 35.94 3.02
5676 6714 4.329545 GGCCACGGACTTGCCAGA 62.330 66.667 0.00 0.00 44.70 3.86
5680 6718 4.329545 TCTGGGCCACGGACTTGC 62.330 66.667 0.00 0.00 0.00 4.01
5681 6719 2.046892 CTCTGGGCCACGGACTTG 60.047 66.667 0.00 0.00 0.00 3.16
5682 6720 3.322466 CCTCTGGGCCACGGACTT 61.322 66.667 0.00 0.00 0.00 3.01
5695 6733 0.540830 ACAAGAGACAGACGGCCTCT 60.541 55.000 0.00 0.00 38.79 3.69
5696 6734 1.135344 GTACAAGAGACAGACGGCCTC 60.135 57.143 0.00 0.00 0.00 4.70
5697 6735 0.889306 GTACAAGAGACAGACGGCCT 59.111 55.000 0.00 0.00 0.00 5.19
5698 6736 0.456312 CGTACAAGAGACAGACGGCC 60.456 60.000 0.00 0.00 0.00 6.13
5699 6737 1.071567 GCGTACAAGAGACAGACGGC 61.072 60.000 0.00 0.00 34.19 5.68
5700 6738 0.240145 TGCGTACAAGAGACAGACGG 59.760 55.000 0.00 0.00 34.19 4.79
5701 6739 1.914051 CATGCGTACAAGAGACAGACG 59.086 52.381 0.00 0.00 36.62 4.18
5702 6740 1.656095 GCATGCGTACAAGAGACAGAC 59.344 52.381 0.00 0.00 0.00 3.51
5703 6741 1.272212 TGCATGCGTACAAGAGACAGA 59.728 47.619 14.09 0.00 0.00 3.41
5704 6742 1.657594 CTGCATGCGTACAAGAGACAG 59.342 52.381 14.09 0.00 0.00 3.51
5705 6743 1.272212 TCTGCATGCGTACAAGAGACA 59.728 47.619 14.09 0.00 0.00 3.41
5706 6744 1.656095 GTCTGCATGCGTACAAGAGAC 59.344 52.381 14.09 14.09 0.00 3.36
5707 6745 1.404181 GGTCTGCATGCGTACAAGAGA 60.404 52.381 20.02 10.34 0.00 3.10
5708 6746 1.002366 GGTCTGCATGCGTACAAGAG 58.998 55.000 20.02 8.30 0.00 2.85
5709 6747 0.320050 TGGTCTGCATGCGTACAAGA 59.680 50.000 20.02 11.64 0.00 3.02
5710 6748 1.372582 ATGGTCTGCATGCGTACAAG 58.627 50.000 20.02 9.61 0.00 3.16
5711 6749 2.093711 ACTATGGTCTGCATGCGTACAA 60.094 45.455 20.02 12.04 0.00 2.41
5712 6750 1.480545 ACTATGGTCTGCATGCGTACA 59.519 47.619 20.02 13.71 0.00 2.90
5713 6751 1.860950 CACTATGGTCTGCATGCGTAC 59.139 52.381 14.09 13.18 0.00 3.67
5714 6752 1.202521 CCACTATGGTCTGCATGCGTA 60.203 52.381 14.09 0.00 31.35 4.42
5715 6753 0.462581 CCACTATGGTCTGCATGCGT 60.463 55.000 14.09 0.00 31.35 5.24
5716 6754 1.779025 GCCACTATGGTCTGCATGCG 61.779 60.000 14.09 8.20 40.46 4.73
5717 6755 1.450531 GGCCACTATGGTCTGCATGC 61.451 60.000 11.82 11.82 39.55 4.06
5718 6756 0.107066 TGGCCACTATGGTCTGCATG 60.107 55.000 0.00 0.00 44.07 4.06
5719 6757 0.107017 GTGGCCACTATGGTCTGCAT 60.107 55.000 29.12 0.00 44.07 3.96
5720 6758 1.299648 GTGGCCACTATGGTCTGCA 59.700 57.895 29.12 0.00 44.07 4.41
5721 6759 1.452108 GGTGGCCACTATGGTCTGC 60.452 63.158 33.91 11.44 44.07 4.26
5722 6760 1.153369 CGGTGGCCACTATGGTCTG 60.153 63.158 33.91 8.83 44.07 3.51
5723 6761 2.367202 CCGGTGGCCACTATGGTCT 61.367 63.158 33.91 0.00 44.07 3.85
5724 6762 2.189521 CCGGTGGCCACTATGGTC 59.810 66.667 33.91 16.08 43.98 4.02
5725 6763 4.109675 GCCGGTGGCCACTATGGT 62.110 66.667 33.91 0.00 44.06 3.55
5735 6773 1.827399 AATAGGATAGGCGCCGGTGG 61.827 60.000 23.20 3.39 0.00 4.61
5736 6774 0.670546 CAATAGGATAGGCGCCGGTG 60.671 60.000 23.20 11.67 0.00 4.94
5737 6775 0.830444 TCAATAGGATAGGCGCCGGT 60.830 55.000 23.20 14.30 0.00 5.28
5738 6776 0.320374 TTCAATAGGATAGGCGCCGG 59.680 55.000 23.20 0.00 0.00 6.13
5739 6777 1.272490 TCTTCAATAGGATAGGCGCCG 59.728 52.381 23.20 2.84 0.00 6.46
5740 6778 3.402628 TTCTTCAATAGGATAGGCGCC 57.597 47.619 21.89 21.89 0.00 6.53
5741 6779 5.582665 CCTAATTCTTCAATAGGATAGGCGC 59.417 44.000 0.00 0.00 0.00 6.53
5742 6780 6.702329 ACCTAATTCTTCAATAGGATAGGCG 58.298 40.000 5.14 0.00 0.00 5.52
5743 6781 8.926092 AAACCTAATTCTTCAATAGGATAGGC 57.074 34.615 5.14 0.00 0.00 3.93
5767 6805 7.761608 TGGAACCCTAATTCTTCTCCTAAAAA 58.238 34.615 0.00 0.00 0.00 1.94
5768 6806 7.337826 TGGAACCCTAATTCTTCTCCTAAAA 57.662 36.000 0.00 0.00 0.00 1.52
5769 6807 6.578439 GCTGGAACCCTAATTCTTCTCCTAAA 60.578 42.308 0.00 0.00 0.00 1.85
5770 6808 5.104485 GCTGGAACCCTAATTCTTCTCCTAA 60.104 44.000 0.00 0.00 0.00 2.69
5771 6809 4.409247 GCTGGAACCCTAATTCTTCTCCTA 59.591 45.833 0.00 0.00 0.00 2.94
5772 6810 3.201045 GCTGGAACCCTAATTCTTCTCCT 59.799 47.826 0.00 0.00 0.00 3.69
5773 6811 3.546724 GCTGGAACCCTAATTCTTCTCC 58.453 50.000 0.00 0.00 0.00 3.71
5774 6812 3.118738 TCGCTGGAACCCTAATTCTTCTC 60.119 47.826 0.00 0.00 0.00 2.87
5775 6813 2.838202 TCGCTGGAACCCTAATTCTTCT 59.162 45.455 0.00 0.00 0.00 2.85
5776 6814 3.261981 TCGCTGGAACCCTAATTCTTC 57.738 47.619 0.00 0.00 0.00 2.87
5777 6815 3.741388 CGATCGCTGGAACCCTAATTCTT 60.741 47.826 0.26 0.00 0.00 2.52
5778 6816 2.224066 CGATCGCTGGAACCCTAATTCT 60.224 50.000 0.26 0.00 0.00 2.40
5779 6817 2.135933 CGATCGCTGGAACCCTAATTC 58.864 52.381 0.26 0.00 0.00 2.17
5780 6818 1.760613 TCGATCGCTGGAACCCTAATT 59.239 47.619 11.09 0.00 0.00 1.40
5781 6819 1.341531 CTCGATCGCTGGAACCCTAAT 59.658 52.381 11.09 0.00 0.00 1.73
5782 6820 0.744874 CTCGATCGCTGGAACCCTAA 59.255 55.000 11.09 0.00 0.00 2.69
5783 6821 0.395311 ACTCGATCGCTGGAACCCTA 60.395 55.000 11.09 0.00 0.00 3.53
5784 6822 1.668101 GACTCGATCGCTGGAACCCT 61.668 60.000 11.09 0.00 0.00 4.34
5785 6823 1.227002 GACTCGATCGCTGGAACCC 60.227 63.158 11.09 0.00 0.00 4.11
5786 6824 1.586564 CGACTCGATCGCTGGAACC 60.587 63.158 11.09 0.00 45.52 3.62
5787 6825 3.984241 CGACTCGATCGCTGGAAC 58.016 61.111 11.09 1.98 45.52 3.62
5792 6830 7.306769 CTGATACAGATTCGACTCGATCGCT 62.307 48.000 11.09 0.00 41.44 4.93
5793 6831 5.184639 CTGATACAGATTCGACTCGATCGC 61.185 50.000 11.09 0.00 41.44 4.58
5794 6832 4.390501 CTGATACAGATTCGACTCGATCG 58.609 47.826 9.36 9.36 42.37 3.69
5795 6833 4.155449 GCTGATACAGATTCGACTCGATC 58.845 47.826 1.07 2.83 32.19 3.69
5796 6834 3.057876 GGCTGATACAGATTCGACTCGAT 60.058 47.826 1.07 0.00 32.19 3.59
5797 6835 2.290916 GGCTGATACAGATTCGACTCGA 59.709 50.000 0.00 0.00 32.44 4.04
5798 6836 2.656085 GGCTGATACAGATTCGACTCG 58.344 52.381 2.81 0.00 32.44 4.18
5799 6837 2.033550 ACGGCTGATACAGATTCGACTC 59.966 50.000 0.00 0.00 32.44 3.36
5800 6838 2.025155 ACGGCTGATACAGATTCGACT 58.975 47.619 0.00 0.00 32.44 4.18
5801 6839 2.120232 CACGGCTGATACAGATTCGAC 58.880 52.381 0.00 0.00 32.44 4.20
5802 6840 2.021457 TCACGGCTGATACAGATTCGA 58.979 47.619 0.00 0.00 32.44 3.71
5803 6841 2.492019 TCACGGCTGATACAGATTCG 57.508 50.000 0.00 5.72 32.44 3.34
5804 6842 2.478134 GCATCACGGCTGATACAGATTC 59.522 50.000 0.00 0.00 35.17 2.52
5805 6843 2.158914 TGCATCACGGCTGATACAGATT 60.159 45.455 0.00 0.00 35.17 2.40
5806 6844 1.413812 TGCATCACGGCTGATACAGAT 59.586 47.619 0.00 0.00 35.17 2.90
5807 6845 0.823460 TGCATCACGGCTGATACAGA 59.177 50.000 0.00 0.00 35.17 3.41
5808 6846 0.933097 GTGCATCACGGCTGATACAG 59.067 55.000 0.00 0.00 35.17 2.74
5809 6847 0.536724 AGTGCATCACGGCTGATACA 59.463 50.000 0.00 0.00 39.64 2.29
5810 6848 0.933097 CAGTGCATCACGGCTGATAC 59.067 55.000 0.00 0.00 39.64 2.24
5811 6849 0.823460 TCAGTGCATCACGGCTGATA 59.177 50.000 0.00 0.00 39.64 2.15
5812 6850 0.179702 ATCAGTGCATCACGGCTGAT 59.820 50.000 8.92 8.92 42.00 2.90
5813 6851 0.741927 CATCAGTGCATCACGGCTGA 60.742 55.000 0.00 5.07 41.43 4.26
5814 6852 1.712018 CCATCAGTGCATCACGGCTG 61.712 60.000 0.00 0.00 39.64 4.85
5815 6853 1.450848 CCATCAGTGCATCACGGCT 60.451 57.895 0.00 0.00 39.64 5.52
5816 6854 2.475466 CCCATCAGTGCATCACGGC 61.475 63.158 0.00 0.00 39.64 5.68
5817 6855 0.812811 CTCCCATCAGTGCATCACGG 60.813 60.000 0.00 0.00 39.64 4.94
5818 6856 0.176449 TCTCCCATCAGTGCATCACG 59.824 55.000 0.00 0.00 39.64 4.35
5819 6857 2.408271 TTCTCCCATCAGTGCATCAC 57.592 50.000 0.00 0.00 34.10 3.06
5820 6858 3.713248 ACTATTCTCCCATCAGTGCATCA 59.287 43.478 0.00 0.00 0.00 3.07
5821 6859 4.348863 ACTATTCTCCCATCAGTGCATC 57.651 45.455 0.00 0.00 0.00 3.91
5822 6860 5.894298 TTACTATTCTCCCATCAGTGCAT 57.106 39.130 0.00 0.00 0.00 3.96
5823 6861 5.894298 ATTACTATTCTCCCATCAGTGCA 57.106 39.130 0.00 0.00 0.00 4.57
5824 6862 8.677148 TTTTATTACTATTCTCCCATCAGTGC 57.323 34.615 0.00 0.00 0.00 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.