Multiple sequence alignment - TraesCS4D01G109100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G109100 chr4D 100.000 6796 0 0 1 6796 88149636 88142841 0.000000e+00 12550.0
1 TraesCS4D01G109100 chr4D 96.078 102 4 0 3611 3712 377455677 377455576 4.220000e-37 167.0
2 TraesCS4D01G109100 chr4D 83.333 162 19 4 1362 1522 92186238 92186392 7.100000e-30 143.0
3 TraesCS4D01G109100 chr4D 91.765 85 6 1 3165 3249 665363 665446 4.310000e-22 117.0
4 TraesCS4D01G109100 chr4D 90.805 87 8 0 3160 3246 66003749 66003663 4.310000e-22 117.0
5 TraesCS4D01G109100 chr4A 91.413 2760 143 50 51 2783 501130182 501127490 0.000000e+00 3698.0
6 TraesCS4D01G109100 chr4A 92.054 1548 82 18 4904 6441 501126808 501125292 0.000000e+00 2139.0
7 TraesCS4D01G109100 chr4A 97.867 375 8 0 2784 3158 501127456 501127082 0.000000e+00 649.0
8 TraesCS4D01G109100 chr4A 94.864 331 16 1 4496 4825 715601426 715601096 3.630000e-142 516.0
9 TraesCS4D01G109100 chr4A 92.353 340 10 4 6467 6796 501125218 501124885 2.870000e-128 470.0
10 TraesCS4D01G109100 chr4A 87.833 263 27 5 4189 4446 624353352 624353090 3.080000e-78 303.0
11 TraesCS4D01G109100 chr4A 82.353 289 47 4 1923 2208 7329972 7330259 1.460000e-61 248.0
12 TraesCS4D01G109100 chr4A 81.879 298 51 3 1923 2218 593661616 593661320 1.460000e-61 248.0
13 TraesCS4D01G109100 chr4A 78.248 331 56 10 5260 5589 501126279 501125964 1.500000e-46 198.0
14 TraesCS4D01G109100 chr4A 90.816 98 8 1 3152 3249 379040941 379041037 5.530000e-26 130.0
15 TraesCS4D01G109100 chr4B 92.124 1930 73 24 4904 6796 124920015 124918128 0.000000e+00 2649.0
16 TraesCS4D01G109100 chr4B 89.871 1629 94 34 56 1655 124924170 124922584 0.000000e+00 2028.0
17 TraesCS4D01G109100 chr4B 96.827 977 23 5 1814 2783 124921766 124920791 0.000000e+00 1626.0
18 TraesCS4D01G109100 chr4B 95.778 379 15 1 2784 3162 124920757 124920380 1.620000e-170 610.0
19 TraesCS4D01G109100 chr4B 93.103 377 18 3 3243 3619 124920382 124920014 4.630000e-151 545.0
20 TraesCS4D01G109100 chr4B 81.413 269 41 7 1434 1701 417139916 417140176 1.920000e-50 211.0
21 TraesCS4D01G109100 chr4B 90.833 120 10 1 1655 1774 124921863 124921745 7.050000e-35 159.0
22 TraesCS4D01G109100 chr4B 88.119 101 10 2 3149 3247 204335857 204335757 1.200000e-22 119.0
23 TraesCS4D01G109100 chr6A 94.399 857 31 6 3982 4821 596907640 596906784 0.000000e+00 1301.0
24 TraesCS4D01G109100 chr6A 94.872 273 14 0 3713 3985 596908039 596907767 1.750000e-115 427.0
25 TraesCS4D01G109100 chr6A 97.000 100 3 0 3613 3712 168617266 168617167 1.170000e-37 169.0
26 TraesCS4D01G109100 chr6A 93.805 113 4 3 3601 3712 105041895 105042005 4.220000e-37 167.0
27 TraesCS4D01G109100 chr6A 81.928 166 21 5 1431 1587 479266994 479266829 1.540000e-26 132.0
28 TraesCS4D01G109100 chr6A 92.308 91 6 1 3160 3250 508000946 508000857 1.990000e-25 128.0
29 TraesCS4D01G109100 chr6A 91.209 91 7 1 3160 3250 349779912 349779823 9.260000e-24 122.0
30 TraesCS4D01G109100 chr6A 91.860 86 7 0 3160 3245 407093069 407093154 3.330000e-23 121.0
31 TraesCS4D01G109100 chr6A 86.538 104 12 2 3145 3248 555730843 555730742 5.570000e-21 113.0
32 TraesCS4D01G109100 chr3A 92.988 656 27 6 3982 4623 64320459 64321109 0.000000e+00 939.0
33 TraesCS4D01G109100 chr3A 94.224 277 16 0 3709 3985 64320044 64320320 2.270000e-114 424.0
34 TraesCS4D01G109100 chr3A 97.044 203 5 1 4624 4825 64324472 64324674 2.350000e-89 340.0
35 TraesCS4D01G109100 chr3A 88.550 262 25 4 4191 4447 234875883 234876144 5.120000e-81 313.0
36 TraesCS4D01G109100 chr3A 92.308 91 6 1 3160 3250 50435603 50435514 1.990000e-25 128.0
37 TraesCS4D01G109100 chr1D 94.421 484 21 3 3711 4194 31234653 31234176 0.000000e+00 739.0
38 TraesCS4D01G109100 chr1D 94.560 386 16 4 4443 4824 31234181 31233797 5.870000e-165 592.0
39 TraesCS4D01G109100 chr1D 89.272 261 23 4 4191 4446 100462103 100461843 8.500000e-84 322.0
40 TraesCS4D01G109100 chr1D 90.244 246 18 5 4191 4431 7358711 7358467 3.960000e-82 316.0
41 TraesCS4D01G109100 chr1D 91.011 89 6 2 3161 3248 211953080 211952993 1.200000e-22 119.0
42 TraesCS4D01G109100 chr7B 92.739 482 29 3 3713 4194 616430099 616430574 0.000000e+00 691.0
43 TraesCS4D01G109100 chr7B 94.531 384 18 3 4443 4824 616430569 616430951 2.110000e-164 590.0
44 TraesCS4D01G109100 chr7B 97.647 85 2 0 4826 4910 607316517 607316601 5.490000e-31 147.0
45 TraesCS4D01G109100 chr7B 84.158 101 14 2 1381 1481 629027617 629027519 5.610000e-16 97.1
46 TraesCS4D01G109100 chr2D 93.046 417 19 3 3713 4120 2314790 2314375 9.750000e-168 601.0
47 TraesCS4D01G109100 chr2D 95.327 214 8 1 4443 4654 2314376 2314163 8.440000e-89 339.0
48 TraesCS4D01G109100 chr2D 83.922 255 39 2 1925 2177 19266805 19267059 6.810000e-60 243.0
49 TraesCS4D01G109100 chr2D 83.922 255 39 2 1925 2177 406698622 406698876 6.810000e-60 243.0
50 TraesCS4D01G109100 chr2D 81.145 297 51 5 1925 2218 274368607 274368313 4.100000e-57 233.0
51 TraesCS4D01G109100 chr2D 80.287 279 43 7 3332 3606 524330360 524330090 4.160000e-47 200.0
52 TraesCS4D01G109100 chr2D 93.103 87 6 0 3158 3244 13478797 13478711 1.990000e-25 128.0
53 TraesCS4D01G109100 chr2D 93.506 77 4 1 1490 1565 29275517 29275593 5.570000e-21 113.0
54 TraesCS4D01G109100 chr1B 82.243 428 51 19 1446 1859 288400949 288401365 5.050000e-91 346.0
55 TraesCS4D01G109100 chr1B 81.544 298 52 3 1923 2218 179883118 179882822 6.810000e-60 243.0
56 TraesCS4D01G109100 chr1B 81.544 298 52 3 1923 2218 179885288 179884992 6.810000e-60 243.0
57 TraesCS4D01G109100 chr1B 97.647 85 2 0 4826 4910 221756916 221756832 5.490000e-31 147.0
58 TraesCS4D01G109100 chr1A 89.098 266 23 5 4188 4448 53321304 53321040 6.570000e-85 326.0
59 TraesCS4D01G109100 chr1A 93.407 91 5 1 3160 3250 527083931 527084020 4.280000e-27 134.0
60 TraesCS4D01G109100 chr1A 94.118 85 5 0 3160 3244 12556265 12556181 5.530000e-26 130.0
61 TraesCS4D01G109100 chr1A 93.103 87 6 0 3160 3246 588664860 588664946 1.990000e-25 128.0
62 TraesCS4D01G109100 chr1A 92.135 89 5 2 3161 3248 267797150 267797063 2.570000e-24 124.0
63 TraesCS4D01G109100 chr1A 97.222 36 1 0 1826 1861 369995254 369995289 2.050000e-05 62.1
64 TraesCS4D01G109100 chr5D 88.889 261 26 3 4190 4447 418945933 418946193 1.100000e-82 318.0
65 TraesCS4D01G109100 chr5D 100.000 82 0 0 4825 4906 413571628 413571547 1.180000e-32 152.0
66 TraesCS4D01G109100 chr5D 91.089 101 8 1 3152 3251 526559556 526559656 1.190000e-27 135.0
67 TraesCS4D01G109100 chr5D 93.023 86 6 0 3160 3245 551403904 551403989 7.160000e-25 126.0
68 TraesCS4D01G109100 chr5D 88.060 67 6 2 1815 1880 541942187 541942122 2.030000e-10 78.7
69 TraesCS4D01G109100 chr3B 87.313 268 29 5 4184 4447 786867573 786867307 1.110000e-77 302.0
70 TraesCS4D01G109100 chr3B 81.132 265 41 9 1377 1637 390917196 390916937 3.210000e-48 204.0
71 TraesCS4D01G109100 chr3B 96.591 88 3 0 4826 4913 571304672 571304585 5.490000e-31 147.0
72 TraesCS4D01G109100 chr3B 90.909 99 7 1 3146 3244 11069987 11070083 1.540000e-26 132.0
73 TraesCS4D01G109100 chr6B 82.192 292 49 3 1923 2212 541150211 541150501 1.460000e-61 248.0
74 TraesCS4D01G109100 chr6B 96.667 90 2 1 4826 4915 577265301 577265213 1.530000e-31 148.0
75 TraesCS4D01G109100 chr6B 90.291 103 8 2 3147 3247 713833453 713833555 4.280000e-27 134.0
76 TraesCS4D01G109100 chr6B 88.350 103 10 2 3147 3247 713937492 713937594 9.260000e-24 122.0
77 TraesCS4D01G109100 chr5A 81.544 298 52 3 1923 2218 309289077 309288781 6.810000e-60 243.0
78 TraesCS4D01G109100 chr5A 82.007 289 48 4 1923 2208 512778669 512778382 6.810000e-60 243.0
79 TraesCS4D01G109100 chr5A 81.633 294 35 13 1349 1629 634499737 634499450 6.860000e-55 226.0
80 TraesCS4D01G109100 chr5A 93.182 88 6 0 3160 3247 32836511 32836424 5.530000e-26 130.0
81 TraesCS4D01G109100 chr5A 92.308 91 6 1 3160 3250 560883393 560883482 1.990000e-25 128.0
82 TraesCS4D01G109100 chr7D 81.724 290 50 3 1925 2212 411546693 411546981 8.810000e-59 239.0
83 TraesCS4D01G109100 chr7D 82.374 278 39 6 3324 3591 62939579 62939302 4.100000e-57 233.0
84 TraesCS4D01G109100 chr7D 81.081 296 53 3 1925 2218 631741557 631741263 4.100000e-57 233.0
85 TraesCS4D01G109100 chr7D 81.550 271 42 5 3330 3592 62193197 62192927 4.130000e-52 217.0
86 TraesCS4D01G109100 chr7D 96.078 102 4 0 3611 3712 120667971 120667870 4.220000e-37 167.0
87 TraesCS4D01G109100 chr7D 74.882 422 76 23 1397 1810 572034856 572034457 1.520000e-36 165.0
88 TraesCS4D01G109100 chr7D 82.895 76 6 7 1810 1880 571484508 571484435 2.050000e-05 62.1
89 TraesCS4D01G109100 chr3D 81.419 296 52 3 1925 2218 81389543 81389249 8.810000e-59 239.0
90 TraesCS4D01G109100 chr3D 92.920 113 6 2 3601 3712 327121787 327121898 5.450000e-36 163.0
91 TraesCS4D01G109100 chr3D 94.186 86 5 0 3160 3245 302930387 302930472 1.540000e-26 132.0
92 TraesCS4D01G109100 chr3D 94.118 85 5 0 3160 3244 497908038 497907954 5.530000e-26 130.0
93 TraesCS4D01G109100 chr3D 90.217 92 9 0 3153 3244 567196556 567196647 3.330000e-23 121.0
94 TraesCS4D01G109100 chr3D 79.866 149 26 4 1717 1861 583037787 583037935 9.320000e-19 106.0
95 TraesCS4D01G109100 chr3D 97.561 41 1 0 3838 3878 143964343 143964303 3.400000e-08 71.3
96 TraesCS4D01G109100 chr6D 81.410 312 38 12 1362 1656 338738597 338738289 3.170000e-58 237.0
97 TraesCS4D01G109100 chr6D 97.647 85 2 0 4826 4910 266773197 266773113 5.490000e-31 147.0
98 TraesCS4D01G109100 chr6D 92.771 83 6 0 3163 3245 465044504 465044422 3.330000e-23 121.0
99 TraesCS4D01G109100 chr6D 90.110 91 8 1 3160 3250 65054650 65054561 4.310000e-22 117.0
100 TraesCS4D01G109100 chr6D 87.500 96 10 2 3157 3251 26814894 26814988 7.210000e-20 110.0
101 TraesCS4D01G109100 chr6D 87.500 96 10 2 3157 3251 26894982 26895076 7.210000e-20 110.0
102 TraesCS4D01G109100 chr6D 88.889 90 9 1 3156 3244 159020749 159020660 7.210000e-20 110.0
103 TraesCS4D01G109100 chr6D 87.778 90 10 1 3160 3249 26814981 26814893 3.350000e-18 104.0
104 TraesCS4D01G109100 chr6D 86.458 96 11 2 3157 3251 26858642 26858736 3.350000e-18 104.0
105 TraesCS4D01G109100 chr6D 87.778 90 10 1 3160 3249 26895069 26894981 3.350000e-18 104.0
106 TraesCS4D01G109100 chr6D 80.342 117 19 3 1347 1461 14538927 14539041 1.210000e-12 86.1
107 TraesCS4D01G109100 chr6D 88.889 72 2 3 1800 1865 69837098 69837169 4.370000e-12 84.2
108 TraesCS4D01G109100 chr7A 86.772 189 21 4 1434 1620 664370855 664370669 2.480000e-49 207.0
109 TraesCS4D01G109100 chr7A 96.078 102 4 0 3614 3715 7218958 7218857 4.220000e-37 167.0
110 TraesCS4D01G109100 chr7A 96.667 90 2 1 4826 4915 667231117 667231029 1.530000e-31 148.0
111 TraesCS4D01G109100 chr7A 73.872 421 71 25 1361 1775 661295710 661295323 1.540000e-26 132.0
112 TraesCS4D01G109100 chr5B 97.000 100 3 0 3613 3712 575061153 575061252 1.170000e-37 169.0
113 TraesCS4D01G109100 chr5B 78.188 298 40 17 1349 1630 637447822 637447534 4.220000e-37 167.0
114 TraesCS4D01G109100 chr5B 96.591 88 2 1 4826 4913 108832890 108832976 1.980000e-30 145.0
115 TraesCS4D01G109100 chr2A 97.000 100 3 0 3613 3712 64973657 64973558 1.170000e-37 169.0
116 TraesCS4D01G109100 chr2A 96.117 103 4 0 3610 3712 587332856 587332754 1.170000e-37 169.0
117 TraesCS4D01G109100 chr2A 87.162 148 15 4 1490 1635 31388744 31388889 1.520000e-36 165.0
118 TraesCS4D01G109100 chr2A 94.444 90 4 1 3160 3249 632952993 632952905 3.310000e-28 137.0
119 TraesCS4D01G109100 chr2A 91.489 94 6 2 3156 3247 729165592 729165685 1.990000e-25 128.0
120 TraesCS4D01G109100 chr2A 81.818 77 8 5 1712 1786 716916331 716916259 7.360000e-05 60.2
121 TraesCS4D01G109100 chr2B 80.349 229 37 5 1414 1635 47370372 47370145 4.220000e-37 167.0
122 TraesCS4D01G109100 chr2B 97.727 88 1 1 4826 4913 127147960 127147874 4.250000e-32 150.0
123 TraesCS4D01G109100 chrUn 82.119 151 14 6 1720 1861 41693003 41692857 4.310000e-22 117.0
124 TraesCS4D01G109100 chrUn 88.636 88 8 2 3160 3246 36705508 36705594 9.320000e-19 106.0
125 TraesCS4D01G109100 chrUn 86.047 86 11 1 3159 3244 35764477 35764393 2.610000e-14 91.6
126 TraesCS4D01G109100 chrUn 85.882 85 12 0 3160 3244 83591839 83591755 2.610000e-14 91.6
127 TraesCS4D01G109100 chrUn 85.556 90 9 1 3160 3245 134953847 134953758 2.610000e-14 91.6
128 TraesCS4D01G109100 chrUn 85.556 90 9 1 3160 3245 134957985 134957896 2.610000e-14 91.6
129 TraesCS4D01G109100 chrUn 85.556 90 9 1 3160 3245 152551884 152551795 2.610000e-14 91.6
130 TraesCS4D01G109100 chrUn 85.556 90 9 1 3160 3245 303761959 303761870 2.610000e-14 91.6
131 TraesCS4D01G109100 chrUn 86.047 86 11 1 3159 3244 309684555 309684639 2.610000e-14 91.6
132 TraesCS4D01G109100 chrUn 78.873 142 20 6 1361 1495 90079164 90079026 3.380000e-13 87.9
133 TraesCS4D01G109100 chrUn 85.057 87 12 1 3159 3244 119420138 119420224 3.380000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G109100 chr4D 88142841 88149636 6795 True 12550.000000 12550 100.000000 1 6796 1 chr4D.!!$R2 6795
1 TraesCS4D01G109100 chr4A 501124885 501130182 5297 True 1430.800000 3698 90.387000 51 6796 5 chr4A.!!$R4 6745
2 TraesCS4D01G109100 chr4B 124918128 124924170 6042 True 1269.500000 2649 93.089333 56 6796 6 chr4B.!!$R2 6740
3 TraesCS4D01G109100 chr6A 596906784 596908039 1255 True 864.000000 1301 94.635500 3713 4821 2 chr6A.!!$R6 1108
4 TraesCS4D01G109100 chr3A 64320044 64324674 4630 False 567.666667 939 94.752000 3709 4825 3 chr3A.!!$F2 1116
5 TraesCS4D01G109100 chr1D 31233797 31234653 856 True 665.500000 739 94.490500 3711 4824 2 chr1D.!!$R4 1113
6 TraesCS4D01G109100 chr7B 616430099 616430951 852 False 640.500000 691 93.635000 3713 4824 2 chr7B.!!$F2 1111
7 TraesCS4D01G109100 chr2D 2314163 2314790 627 True 470.000000 601 94.186500 3713 4654 2 chr2D.!!$R4 941
8 TraesCS4D01G109100 chr1B 179882822 179885288 2466 True 243.000000 243 81.544000 1923 2218 2 chr1B.!!$R2 295

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
26 27 0.251787 GGGGCTCAGGTGGTTCAATT 60.252 55.000 0.00 0.0 0.00 2.32 F
28 29 1.273327 GGGCTCAGGTGGTTCAATTTG 59.727 52.381 0.00 0.0 0.00 2.32 F
1387 1438 0.675208 ATGTATCCGTGCGTTGCCAA 60.675 50.000 0.00 0.0 0.00 4.52 F
1968 4925 2.546373 CGACCCTGACAACGGAACTTTA 60.546 50.000 0.00 0.0 0.00 1.85 F
3465 6582 1.278127 ACATCCCTCCGATTTGAACGT 59.722 47.619 0.00 0.0 0.00 3.99 F
3761 6878 0.605860 ATAGCTCGGTATCGCGTCCT 60.606 55.000 5.77 0.0 36.13 3.85 F
5263 11917 0.389391 GGCGGCTACTATGAAGAGCA 59.611 55.000 0.00 0.0 37.98 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1260 1284 0.029681 AGCAGTGTCCCATATCCCCT 60.030 55.000 0.00 0.00 0.00 4.79 R
1759 2541 0.178964 TGGCTTTTCACCCCTTCTGG 60.179 55.000 0.00 0.00 0.00 3.86 R
3083 6082 1.448540 GTCGTGTCTGAGGGCCATG 60.449 63.158 6.18 0.00 0.00 3.66 R
3468 6585 0.952984 GTTGCAGGGCAGAGTGACTC 60.953 60.000 3.98 3.98 40.61 3.36 R
4804 11453 0.179000 AGAGCGGATTTTCAGCGGAT 59.821 50.000 0.00 0.00 42.41 4.18 R
5518 12173 0.978907 AGGAAAGGGCATGCAAAAGG 59.021 50.000 21.36 0.00 0.00 3.11 R
6235 12913 0.605589 AGCGGCTAACCAAACAGTCC 60.606 55.000 0.00 0.00 34.57 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 4.742201 CGACACGGGGCTCAGGTG 62.742 72.222 5.54 5.54 37.67 4.00
19 20 4.394712 GACACGGGGCTCAGGTGG 62.395 72.222 11.21 0.00 36.02 4.61
21 22 3.953775 CACGGGGCTCAGGTGGTT 61.954 66.667 0.00 0.00 0.00 3.67
22 23 3.637273 ACGGGGCTCAGGTGGTTC 61.637 66.667 0.00 0.00 0.00 3.62
23 24 3.636231 CGGGGCTCAGGTGGTTCA 61.636 66.667 0.00 0.00 0.00 3.18
24 25 2.843545 GGGGCTCAGGTGGTTCAA 59.156 61.111 0.00 0.00 0.00 2.69
25 26 1.384191 GGGGCTCAGGTGGTTCAAT 59.616 57.895 0.00 0.00 0.00 2.57
26 27 0.251787 GGGGCTCAGGTGGTTCAATT 60.252 55.000 0.00 0.00 0.00 2.32
27 28 1.632589 GGGCTCAGGTGGTTCAATTT 58.367 50.000 0.00 0.00 0.00 1.82
28 29 1.273327 GGGCTCAGGTGGTTCAATTTG 59.727 52.381 0.00 0.00 0.00 2.32
29 30 1.963515 GGCTCAGGTGGTTCAATTTGT 59.036 47.619 0.00 0.00 0.00 2.83
30 31 2.288395 GGCTCAGGTGGTTCAATTTGTG 60.288 50.000 0.00 0.00 0.00 3.33
31 32 2.622942 GCTCAGGTGGTTCAATTTGTGA 59.377 45.455 0.00 0.00 0.00 3.58
32 33 3.068024 GCTCAGGTGGTTCAATTTGTGAA 59.932 43.478 0.00 0.00 44.20 3.18
45 46 8.824159 TTCAATTTGTGAACTTTGTCTTCAAA 57.176 26.923 0.00 0.00 41.47 2.69
46 47 8.824159 TCAATTTGTGAACTTTGTCTTCAAAA 57.176 26.923 0.00 0.00 36.90 2.44
47 48 9.265901 TCAATTTGTGAACTTTGTCTTCAAAAA 57.734 25.926 0.00 0.23 38.58 1.94
48 49 9.532697 CAATTTGTGAACTTTGTCTTCAAAAAG 57.467 29.630 3.58 0.00 42.02 2.27
49 50 9.487790 AATTTGTGAACTTTGTCTTCAAAAAGA 57.512 25.926 2.38 0.00 42.02 2.52
50 51 8.879342 TTTGTGAACTTTGTCTTCAAAAAGAA 57.121 26.923 2.38 0.00 43.04 2.52
51 52 8.879342 TTGTGAACTTTGTCTTCAAAAAGAAA 57.121 26.923 2.38 0.00 43.04 2.52
52 53 8.879342 TGTGAACTTTGTCTTCAAAAAGAAAA 57.121 26.923 2.38 0.00 43.04 2.29
53 54 8.977505 TGTGAACTTTGTCTTCAAAAAGAAAAG 58.022 29.630 14.35 14.35 43.04 2.27
54 55 9.191995 GTGAACTTTGTCTTCAAAAAGAAAAGA 57.808 29.630 18.66 0.00 43.04 2.52
159 160 3.612247 CTCCCGCAGTCCCACTTGG 62.612 68.421 0.00 0.00 0.00 3.61
161 162 4.335647 CCGCAGTCCCACTTGGCT 62.336 66.667 0.00 0.00 0.00 4.75
188 189 2.591715 AACTGACAGTGGCACGCC 60.592 61.111 9.33 0.00 41.54 5.68
221 222 1.377594 TCGAACCGGTCCATCGAGA 60.378 57.895 22.53 5.27 40.34 4.04
229 230 1.585006 GTCCATCGAGACCACACGT 59.415 57.895 0.00 0.00 0.00 4.49
575 597 3.118454 CTGTTCGCGCCATTCCGT 61.118 61.111 0.00 0.00 0.00 4.69
701 723 2.355193 GCTCCTTCGTGCTCCCTCT 61.355 63.158 0.00 0.00 0.00 3.69
758 782 1.448717 GCCTTCCTCGGCTTCTCAC 60.449 63.158 0.00 0.00 46.63 3.51
796 820 6.043411 GGTTTAGCTTCTCATCTCGTGTATT 58.957 40.000 0.00 0.00 0.00 1.89
885 909 2.721603 CGATTTATCTCGTCGCCTCTTG 59.278 50.000 0.00 0.00 34.00 3.02
924 948 2.897436 CGTCTCATCTCCTTTCATGCA 58.103 47.619 0.00 0.00 0.00 3.96
925 949 2.864946 CGTCTCATCTCCTTTCATGCAG 59.135 50.000 0.00 0.00 0.00 4.41
926 950 3.678252 CGTCTCATCTCCTTTCATGCAGT 60.678 47.826 0.00 0.00 0.00 4.40
927 951 3.622163 GTCTCATCTCCTTTCATGCAGTG 59.378 47.826 0.00 0.00 0.00 3.66
928 952 2.355132 CTCATCTCCTTTCATGCAGTGC 59.645 50.000 8.58 8.58 0.00 4.40
951 975 6.653320 TGCCTACCTTATTTCTGTGTACTTTG 59.347 38.462 0.00 0.00 0.00 2.77
999 1023 6.868864 GCTAAAACCTATCTCGATTCATAGCA 59.131 38.462 0.00 0.00 33.07 3.49
1128 1152 1.795768 TGTCGTTGCTTGAGGTGATC 58.204 50.000 0.00 0.00 0.00 2.92
1176 1200 4.083271 GCTTTGTCCTTATCTGGTGTTCAC 60.083 45.833 0.00 0.00 0.00 3.18
1177 1201 4.974645 TTGTCCTTATCTGGTGTTCACT 57.025 40.909 2.98 0.00 0.00 3.41
1184 1208 5.352569 CCTTATCTGGTGTTCACTTAAGCAG 59.647 44.000 1.29 0.10 40.05 4.24
1185 1209 3.838244 TCTGGTGTTCACTTAAGCAGT 57.162 42.857 1.29 0.00 39.75 4.40
1191 1215 7.934665 TCTGGTGTTCACTTAAGCAGTAATTTA 59.065 33.333 1.29 0.00 39.75 1.40
1203 1227 9.929722 TTAAGCAGTAATTTATTTGTATGCTCG 57.070 29.630 0.00 0.00 41.61 5.03
1207 1231 8.734030 GCAGTAATTTATTTGTATGCTCGTTTC 58.266 33.333 0.00 0.00 0.00 2.78
1212 1236 9.691362 AATTTATTTGTATGCTCGTTTCAACTT 57.309 25.926 0.00 0.00 0.00 2.66
1213 1237 9.691362 ATTTATTTGTATGCTCGTTTCAACTTT 57.309 25.926 0.00 0.00 0.00 2.66
1214 1238 9.522804 TTTATTTGTATGCTCGTTTCAACTTTT 57.477 25.926 0.00 0.00 0.00 2.27
1215 1239 9.522804 TTATTTGTATGCTCGTTTCAACTTTTT 57.477 25.926 0.00 0.00 0.00 1.94
1217 1241 9.691362 ATTTGTATGCTCGTTTCAACTTTTTAT 57.309 25.926 0.00 0.00 0.00 1.40
1218 1242 9.522804 TTTGTATGCTCGTTTCAACTTTTTATT 57.477 25.926 0.00 0.00 0.00 1.40
1219 1243 9.522804 TTGTATGCTCGTTTCAACTTTTTATTT 57.477 25.926 0.00 0.00 0.00 1.40
1381 1432 2.579873 ACTAGGTATGTATCCGTGCGT 58.420 47.619 0.00 0.00 0.00 5.24
1387 1438 0.675208 ATGTATCCGTGCGTTGCCAA 60.675 50.000 0.00 0.00 0.00 4.52
1432 1491 7.579940 ACACAATAAGAGGATCATATGGGAT 57.420 36.000 2.13 0.00 37.82 3.85
1657 1719 5.304686 TGACTGATCAGTACCAGGTTTTT 57.695 39.130 27.95 0.71 42.66 1.94
1694 2476 5.574891 TTTATTGATGGACCGTGGATTTG 57.425 39.130 0.00 0.00 0.00 2.32
1775 2557 3.295973 TGAAACCAGAAGGGGTGAAAAG 58.704 45.455 0.00 0.00 41.32 2.27
1842 2624 2.586648 ACTGGGTGAAAGATGGAACC 57.413 50.000 0.00 0.00 0.00 3.62
1968 4925 2.546373 CGACCCTGACAACGGAACTTTA 60.546 50.000 0.00 0.00 0.00 1.85
2004 4962 8.020819 TCAGTTTGTCTTTGTTTCACTTACTTG 58.979 33.333 0.00 0.00 0.00 3.16
2118 5079 7.689299 AGCTACCTTCATATTTGCATATACCA 58.311 34.615 0.00 0.00 0.00 3.25
2195 5159 8.893563 TTTTCAGAATCCCTAAATGGTGTTAT 57.106 30.769 0.00 0.00 0.00 1.89
2196 5160 8.893563 TTTCAGAATCCCTAAATGGTGTTATT 57.106 30.769 0.00 0.00 0.00 1.40
2197 5161 9.983024 TTTCAGAATCCCTAAATGGTGTTATTA 57.017 29.630 0.00 0.00 0.00 0.98
2370 5336 5.863935 GGTTGCTGAATTGATCAAGGTTAAC 59.136 40.000 14.54 12.62 37.67 2.01
2914 5913 3.127895 TCCGCTCCACCGATTTTTATTTG 59.872 43.478 0.00 0.00 0.00 2.32
2921 5920 7.627513 GCTCCACCGATTTTTATTTGTCACATA 60.628 37.037 0.00 0.00 0.00 2.29
3083 6082 5.581085 ACACAACTTTCAGACAGTAACTCAC 59.419 40.000 0.00 0.00 0.00 3.51
3155 6154 9.158233 GTTGCCAAGTTACAGTATCTTATTACA 57.842 33.333 3.94 0.00 0.00 2.41
3170 6287 8.990693 ATCTTATTACATAATACTCCCCCTGT 57.009 34.615 0.00 0.00 0.00 4.00
3172 6289 9.901651 TCTTATTACATAATACTCCCCCTGTAA 57.098 33.333 0.00 0.00 34.63 2.41
3175 6292 8.808240 ATTACATAATACTCCCCCTGTAAAGA 57.192 34.615 0.00 0.00 34.05 2.52
3176 6293 8.626917 TTACATAATACTCCCCCTGTAAAGAA 57.373 34.615 0.00 0.00 0.00 2.52
3177 6294 7.707467 ACATAATACTCCCCCTGTAAAGAAT 57.293 36.000 0.00 0.00 0.00 2.40
3178 6295 8.114301 ACATAATACTCCCCCTGTAAAGAATT 57.886 34.615 0.00 0.00 0.00 2.17
3179 6296 9.232882 ACATAATACTCCCCCTGTAAAGAATTA 57.767 33.333 0.00 0.00 0.00 1.40
3184 6301 9.684702 ATACTCCCCCTGTAAAGAATTATAAGA 57.315 33.333 0.00 0.00 0.00 2.10
3185 6302 8.035448 ACTCCCCCTGTAAAGAATTATAAGAG 57.965 38.462 0.00 0.00 0.00 2.85
3186 6303 6.838382 TCCCCCTGTAAAGAATTATAAGAGC 58.162 40.000 0.00 0.00 0.00 4.09
3187 6304 5.701290 CCCCCTGTAAAGAATTATAAGAGCG 59.299 44.000 0.00 0.00 0.00 5.03
3188 6305 6.289064 CCCCTGTAAAGAATTATAAGAGCGT 58.711 40.000 0.00 0.00 0.00 5.07
3189 6306 6.766467 CCCCTGTAAAGAATTATAAGAGCGTT 59.234 38.462 0.00 0.00 0.00 4.84
3190 6307 7.282450 CCCCTGTAAAGAATTATAAGAGCGTTT 59.718 37.037 0.00 0.00 0.00 3.60
3191 6308 9.321562 CCCTGTAAAGAATTATAAGAGCGTTTA 57.678 33.333 0.00 0.00 0.00 2.01
3218 6335 5.388408 ACTACTTTAGTGCTCTAAACGCT 57.612 39.130 15.22 5.59 40.05 5.07
3219 6336 5.400703 ACTACTTTAGTGCTCTAAACGCTC 58.599 41.667 15.22 0.00 40.05 5.03
3220 6337 4.522722 ACTTTAGTGCTCTAAACGCTCT 57.477 40.909 15.22 0.00 40.05 4.09
3221 6338 4.884247 ACTTTAGTGCTCTAAACGCTCTT 58.116 39.130 15.22 0.00 40.05 2.85
3222 6339 6.022163 ACTTTAGTGCTCTAAACGCTCTTA 57.978 37.500 15.22 0.00 40.05 2.10
3223 6340 6.631962 ACTTTAGTGCTCTAAACGCTCTTAT 58.368 36.000 15.22 0.00 40.05 1.73
3224 6341 7.769220 ACTTTAGTGCTCTAAACGCTCTTATA 58.231 34.615 15.22 0.00 40.05 0.98
3225 6342 8.414778 ACTTTAGTGCTCTAAACGCTCTTATAT 58.585 33.333 15.22 0.00 40.05 0.86
3226 6343 9.250624 CTTTAGTGCTCTAAACGCTCTTATATT 57.749 33.333 15.22 0.00 40.05 1.28
3227 6344 9.595823 TTTAGTGCTCTAAACGCTCTTATATTT 57.404 29.630 15.22 0.00 40.05 1.40
3228 6345 7.701809 AGTGCTCTAAACGCTCTTATATTTC 57.298 36.000 0.00 0.00 0.00 2.17
3229 6346 7.493367 AGTGCTCTAAACGCTCTTATATTTCT 58.507 34.615 0.00 0.00 0.00 2.52
3230 6347 7.982354 AGTGCTCTAAACGCTCTTATATTTCTT 59.018 33.333 0.00 0.00 0.00 2.52
3231 6348 8.604890 GTGCTCTAAACGCTCTTATATTTCTTT 58.395 33.333 0.00 0.00 0.00 2.52
3232 6349 9.811995 TGCTCTAAACGCTCTTATATTTCTTTA 57.188 29.630 0.00 0.00 0.00 1.85
3238 6355 8.608844 AACGCTCTTATATTTCTTTATGGAGG 57.391 34.615 0.00 0.00 0.00 4.30
3239 6356 7.162082 ACGCTCTTATATTTCTTTATGGAGGG 58.838 38.462 0.00 0.00 35.06 4.30
3240 6357 7.016268 ACGCTCTTATATTTCTTTATGGAGGGA 59.984 37.037 0.00 0.00 34.22 4.20
3241 6358 7.547370 CGCTCTTATATTTCTTTATGGAGGGAG 59.453 40.741 0.00 0.00 33.23 4.30
3255 6372 5.323382 TGGAGGGAGTACATAATACGGTA 57.677 43.478 0.00 0.00 0.00 4.02
3276 6393 5.896106 GGTATACTCCTTTACACCCTGTACT 59.104 44.000 2.25 0.00 31.69 2.73
3284 6401 5.768164 CCTTTACACCCTGTACTTTTCACAT 59.232 40.000 0.00 0.00 31.69 3.21
3314 6431 6.536447 TGGTTTGTTTACCTACCTTCCTAAG 58.464 40.000 0.00 0.00 39.04 2.18
3322 6439 4.095211 ACCTACCTTCCTAAGAACTGACC 58.905 47.826 0.00 0.00 0.00 4.02
3357 6474 7.260387 TCTTATATAGACAAACCCCACAACA 57.740 36.000 0.00 0.00 0.00 3.33
3364 6481 2.693074 ACAAACCCCACAACAAGTCATC 59.307 45.455 0.00 0.00 0.00 2.92
3405 6522 2.282391 GTGCTGCCACACCATCCA 60.282 61.111 0.00 0.00 41.67 3.41
3465 6582 1.278127 ACATCCCTCCGATTTGAACGT 59.722 47.619 0.00 0.00 0.00 3.99
3466 6583 1.665679 CATCCCTCCGATTTGAACGTG 59.334 52.381 0.00 0.00 0.00 4.49
3467 6584 0.970640 TCCCTCCGATTTGAACGTGA 59.029 50.000 0.00 0.00 0.00 4.35
3468 6585 1.067142 TCCCTCCGATTTGAACGTGAG 60.067 52.381 0.00 0.00 0.00 3.51
3478 6595 3.355626 TTGAACGTGAGAGTCACTCTG 57.644 47.619 13.56 0.00 44.85 3.35
3539 6656 7.816640 ACATTTAATTTATGACACGCTCAACT 58.183 30.769 7.11 0.00 30.60 3.16
3540 6657 8.296713 ACATTTAATTTATGACACGCTCAACTT 58.703 29.630 7.11 0.00 30.60 2.66
3616 6733 4.172641 AGGGGGAATTCATTGGGTATCATT 59.827 41.667 7.93 0.00 0.00 2.57
3617 6734 4.907269 GGGGGAATTCATTGGGTATCATTT 59.093 41.667 7.93 0.00 0.00 2.32
3618 6735 6.081356 GGGGGAATTCATTGGGTATCATTTA 58.919 40.000 7.93 0.00 0.00 1.40
3619 6736 6.014584 GGGGGAATTCATTGGGTATCATTTAC 60.015 42.308 7.93 0.00 0.00 2.01
3620 6737 6.782494 GGGGAATTCATTGGGTATCATTTACT 59.218 38.462 7.93 0.00 0.00 2.24
3621 6738 7.039714 GGGGAATTCATTGGGTATCATTTACTC 60.040 40.741 7.93 0.00 0.00 2.59
3622 6739 7.039714 GGGAATTCATTGGGTATCATTTACTCC 60.040 40.741 7.93 0.00 0.00 3.85
3623 6740 7.039714 GGAATTCATTGGGTATCATTTACTCCC 60.040 40.741 7.93 0.00 38.68 4.30
3624 6741 6.590656 TTCATTGGGTATCATTTACTCCCT 57.409 37.500 0.00 0.00 38.95 4.20
3625 6742 6.187727 TCATTGGGTATCATTTACTCCCTC 57.812 41.667 0.00 0.00 38.95 4.30
3626 6743 5.073144 TCATTGGGTATCATTTACTCCCTCC 59.927 44.000 0.00 0.00 38.95 4.30
3627 6744 2.969950 TGGGTATCATTTACTCCCTCCG 59.030 50.000 0.00 0.00 38.95 4.63
3628 6745 2.970640 GGGTATCATTTACTCCCTCCGT 59.029 50.000 0.00 0.00 35.63 4.69
3629 6746 3.390311 GGGTATCATTTACTCCCTCCGTT 59.610 47.826 0.00 0.00 35.63 4.44
3630 6747 4.502777 GGGTATCATTTACTCCCTCCGTTC 60.503 50.000 0.00 0.00 35.63 3.95
3631 6748 3.840124 ATCATTTACTCCCTCCGTTCC 57.160 47.619 0.00 0.00 0.00 3.62
3632 6749 2.829023 TCATTTACTCCCTCCGTTCCT 58.171 47.619 0.00 0.00 0.00 3.36
3633 6750 3.985127 TCATTTACTCCCTCCGTTCCTA 58.015 45.455 0.00 0.00 0.00 2.94
3634 6751 4.355549 TCATTTACTCCCTCCGTTCCTAA 58.644 43.478 0.00 0.00 0.00 2.69
3635 6752 4.966805 TCATTTACTCCCTCCGTTCCTAAT 59.033 41.667 0.00 0.00 0.00 1.73
3636 6753 5.427481 TCATTTACTCCCTCCGTTCCTAATT 59.573 40.000 0.00 0.00 0.00 1.40
3637 6754 5.767277 TTTACTCCCTCCGTTCCTAATTT 57.233 39.130 0.00 0.00 0.00 1.82
3638 6755 5.767277 TTACTCCCTCCGTTCCTAATTTT 57.233 39.130 0.00 0.00 0.00 1.82
3639 6756 4.652679 ACTCCCTCCGTTCCTAATTTTT 57.347 40.909 0.00 0.00 0.00 1.94
3665 6782 9.965824 TTGTCTTTTTAGAGATTTCAAATGGAC 57.034 29.630 0.00 0.00 0.00 4.02
3666 6783 9.354673 TGTCTTTTTAGAGATTTCAAATGGACT 57.645 29.630 0.00 0.00 0.00 3.85
3687 6804 9.462606 TGGACTACCACATACAGATGTATATAG 57.537 37.037 5.21 7.73 44.82 1.31
3688 6805 9.682465 GGACTACCACATACAGATGTATATAGA 57.318 37.037 5.21 0.00 44.82 1.98
3761 6878 0.605860 ATAGCTCGGTATCGCGTCCT 60.606 55.000 5.77 0.00 36.13 3.85
3808 6925 3.349488 TCGATGTATTAGTGCGAGGTG 57.651 47.619 0.00 0.00 0.00 4.00
3882 6999 1.910671 TCTGGGCCACCGTAGTTAATT 59.089 47.619 0.00 0.00 40.75 1.40
3887 7004 2.676342 GGCCACCGTAGTTAATTCACAG 59.324 50.000 0.00 0.00 0.00 3.66
4128 7401 9.967451 TCATCAACCAAGTATTAGGATAAACAA 57.033 29.630 0.00 0.00 0.00 2.83
4153 7430 6.403866 TTGATTTATGCTCTCTCTCTCTCC 57.596 41.667 0.00 0.00 0.00 3.71
4170 7447 9.094578 CTCTCTCTCCCTCCACATTTAAATATA 57.905 37.037 0.00 0.00 0.00 0.86
4199 7476 9.448587 AATTAACCAATATGTAGTACTCCCTCT 57.551 33.333 0.00 0.00 0.00 3.69
4204 7481 2.822707 TGTAGTACTCCCTCTGGTCC 57.177 55.000 0.00 0.00 0.00 4.46
4216 7493 3.328050 CCCTCTGGTCCTTTTTACTCTGT 59.672 47.826 0.00 0.00 0.00 3.41
4219 7496 5.011738 CCTCTGGTCCTTTTTACTCTGTGTA 59.988 44.000 0.00 0.00 0.00 2.90
4369 7649 9.941325 TTTGGCATTGTGAATACTGATATTTTT 57.059 25.926 0.00 0.00 30.77 1.94
4406 7686 7.769220 TCAAAGTAGAGATACTTTACTTCGGG 58.231 38.462 11.83 7.90 45.43 5.14
4565 7847 7.431249 ACGAAGTACTTACTGAGAAACATCAA 58.569 34.615 8.42 0.00 41.94 2.57
4825 11474 1.633171 CGCTGAAAATCCGCTCTCG 59.367 57.895 0.00 0.00 0.00 4.04
4826 11475 1.078759 CGCTGAAAATCCGCTCTCGT 61.079 55.000 0.00 0.00 0.00 4.18
4827 11476 1.797713 CGCTGAAAATCCGCTCTCGTA 60.798 52.381 0.00 0.00 0.00 3.43
4828 11477 1.855360 GCTGAAAATCCGCTCTCGTAG 59.145 52.381 0.00 0.00 0.00 3.51
4829 11478 2.479730 GCTGAAAATCCGCTCTCGTAGA 60.480 50.000 0.00 0.00 0.00 2.59
4830 11479 3.797184 GCTGAAAATCCGCTCTCGTAGAT 60.797 47.826 0.00 0.00 33.89 1.98
4831 11480 4.363999 CTGAAAATCCGCTCTCGTAGATT 58.636 43.478 0.00 0.00 33.89 2.40
4832 11481 4.360563 TGAAAATCCGCTCTCGTAGATTC 58.639 43.478 0.00 0.00 33.89 2.52
4833 11482 4.142249 TGAAAATCCGCTCTCGTAGATTCA 60.142 41.667 0.00 0.00 33.89 2.57
4834 11483 3.357166 AATCCGCTCTCGTAGATTCAC 57.643 47.619 0.00 0.00 33.89 3.18
4835 11484 2.039818 TCCGCTCTCGTAGATTCACT 57.960 50.000 0.00 0.00 33.89 3.41
4836 11485 1.941294 TCCGCTCTCGTAGATTCACTC 59.059 52.381 0.00 0.00 33.89 3.51
4837 11486 1.671328 CCGCTCTCGTAGATTCACTCA 59.329 52.381 0.00 0.00 33.89 3.41
4838 11487 2.292016 CCGCTCTCGTAGATTCACTCAT 59.708 50.000 0.00 0.00 33.89 2.90
4839 11488 3.243234 CCGCTCTCGTAGATTCACTCATT 60.243 47.826 0.00 0.00 33.89 2.57
4840 11489 4.355437 CGCTCTCGTAGATTCACTCATTT 58.645 43.478 0.00 0.00 33.89 2.32
4841 11490 4.800993 CGCTCTCGTAGATTCACTCATTTT 59.199 41.667 0.00 0.00 33.89 1.82
4842 11491 5.276114 CGCTCTCGTAGATTCACTCATTTTG 60.276 44.000 0.00 0.00 33.89 2.44
4843 11492 5.501574 GCTCTCGTAGATTCACTCATTTTGC 60.502 44.000 0.00 0.00 33.89 3.68
4844 11493 5.724328 TCTCGTAGATTCACTCATTTTGCT 58.276 37.500 0.00 0.00 33.89 3.91
4845 11494 5.807520 TCTCGTAGATTCACTCATTTTGCTC 59.192 40.000 0.00 0.00 33.89 4.26
4846 11495 5.724328 TCGTAGATTCACTCATTTTGCTCT 58.276 37.500 0.00 0.00 0.00 4.09
4847 11496 5.578336 TCGTAGATTCACTCATTTTGCTCTG 59.422 40.000 0.00 0.00 0.00 3.35
4848 11497 5.349817 CGTAGATTCACTCATTTTGCTCTGT 59.650 40.000 0.00 0.00 0.00 3.41
4849 11498 6.531594 CGTAGATTCACTCATTTTGCTCTGTA 59.468 38.462 0.00 0.00 0.00 2.74
4850 11499 7.223582 CGTAGATTCACTCATTTTGCTCTGTAT 59.776 37.037 0.00 0.00 0.00 2.29
4851 11500 7.317842 AGATTCACTCATTTTGCTCTGTATG 57.682 36.000 0.00 0.00 0.00 2.39
4852 11501 6.883217 AGATTCACTCATTTTGCTCTGTATGT 59.117 34.615 0.00 0.00 0.00 2.29
4853 11502 8.043113 AGATTCACTCATTTTGCTCTGTATGTA 58.957 33.333 0.00 0.00 0.00 2.29
4854 11503 7.601073 TTCACTCATTTTGCTCTGTATGTAG 57.399 36.000 0.00 0.00 0.00 2.74
4855 11504 6.701340 TCACTCATTTTGCTCTGTATGTAGT 58.299 36.000 0.00 0.00 0.00 2.73
4856 11505 6.813649 TCACTCATTTTGCTCTGTATGTAGTC 59.186 38.462 0.00 0.00 0.00 2.59
4857 11506 6.591448 CACTCATTTTGCTCTGTATGTAGTCA 59.409 38.462 0.00 0.00 0.00 3.41
4858 11507 6.591834 ACTCATTTTGCTCTGTATGTAGTCAC 59.408 38.462 0.00 0.00 0.00 3.67
4859 11508 6.701340 TCATTTTGCTCTGTATGTAGTCACT 58.299 36.000 0.00 0.00 0.00 3.41
4860 11509 7.161404 TCATTTTGCTCTGTATGTAGTCACTT 58.839 34.615 0.00 0.00 0.00 3.16
4861 11510 6.785488 TTTTGCTCTGTATGTAGTCACTTG 57.215 37.500 0.00 0.00 0.00 3.16
4862 11511 5.468540 TTGCTCTGTATGTAGTCACTTGT 57.531 39.130 0.00 0.00 0.00 3.16
4863 11512 5.060662 TGCTCTGTATGTAGTCACTTGTC 57.939 43.478 0.00 0.00 0.00 3.18
4864 11513 4.099120 GCTCTGTATGTAGTCACTTGTCG 58.901 47.826 0.00 0.00 0.00 4.35
4865 11514 4.142665 GCTCTGTATGTAGTCACTTGTCGA 60.143 45.833 0.00 0.00 0.00 4.20
4866 11515 5.619309 GCTCTGTATGTAGTCACTTGTCGAA 60.619 44.000 0.00 0.00 0.00 3.71
4867 11516 6.321848 TCTGTATGTAGTCACTTGTCGAAA 57.678 37.500 0.00 0.00 0.00 3.46
4868 11517 6.920817 TCTGTATGTAGTCACTTGTCGAAAT 58.079 36.000 0.00 0.00 0.00 2.17
4869 11518 7.027760 TCTGTATGTAGTCACTTGTCGAAATC 58.972 38.462 0.00 0.00 0.00 2.17
4870 11519 6.920817 TGTATGTAGTCACTTGTCGAAATCT 58.079 36.000 0.00 0.00 0.00 2.40
4871 11520 7.027760 TGTATGTAGTCACTTGTCGAAATCTC 58.972 38.462 0.00 0.00 0.00 2.75
4872 11521 5.707242 TGTAGTCACTTGTCGAAATCTCT 57.293 39.130 0.00 0.00 0.00 3.10
4873 11522 6.812879 TGTAGTCACTTGTCGAAATCTCTA 57.187 37.500 0.00 0.00 0.00 2.43
4874 11523 6.843208 TGTAGTCACTTGTCGAAATCTCTAG 58.157 40.000 0.00 0.00 0.00 2.43
4875 11524 6.653740 TGTAGTCACTTGTCGAAATCTCTAGA 59.346 38.462 0.00 0.00 0.00 2.43
4876 11525 6.576662 AGTCACTTGTCGAAATCTCTAGAA 57.423 37.500 0.00 0.00 0.00 2.10
4877 11526 6.982852 AGTCACTTGTCGAAATCTCTAGAAA 58.017 36.000 0.00 0.00 0.00 2.52
4878 11527 7.087639 AGTCACTTGTCGAAATCTCTAGAAAG 58.912 38.462 0.00 0.00 0.00 2.62
4879 11528 7.040340 AGTCACTTGTCGAAATCTCTAGAAAGA 60.040 37.037 0.00 0.00 0.00 2.52
4880 11529 7.061326 GTCACTTGTCGAAATCTCTAGAAAGAC 59.939 40.741 0.00 0.00 0.00 3.01
4881 11530 6.863645 CACTTGTCGAAATCTCTAGAAAGACA 59.136 38.462 0.00 1.29 35.86 3.41
4882 11531 7.382488 CACTTGTCGAAATCTCTAGAAAGACAA 59.618 37.037 16.28 16.28 42.63 3.18
4883 11532 7.926555 ACTTGTCGAAATCTCTAGAAAGACAAA 59.073 33.333 17.13 8.26 43.67 2.83
4884 11533 8.833231 TTGTCGAAATCTCTAGAAAGACAAAT 57.167 30.769 15.51 0.00 42.14 2.32
4885 11534 9.923143 TTGTCGAAATCTCTAGAAAGACAAATA 57.077 29.630 15.51 2.34 42.14 1.40
4896 11545 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
4897 11546 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
4898 11547 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
4899 11548 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
4900 11549 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
4901 11550 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
4902 11551 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
4931 11580 8.342634 GTTTTCTTGCATTCTAAGTTCACAGTA 58.657 33.333 0.00 0.00 0.00 2.74
5011 11661 7.668469 TGTCCAGAGTACATGAGTTAGTTTCTA 59.332 37.037 0.00 0.00 0.00 2.10
5246 11900 2.442087 GGTTATGGTGGCAGGGGC 60.442 66.667 0.00 0.00 40.13 5.80
5263 11917 0.389391 GGCGGCTACTATGAAGAGCA 59.611 55.000 0.00 0.00 37.98 4.26
5300 11954 2.159099 TGGCGAACCAGATGAGTATCAC 60.159 50.000 0.00 0.00 46.38 3.06
5340 11994 6.155827 GGTAAGCTCAGTCTGATGTATCATC 58.844 44.000 2.22 3.16 36.02 2.92
5352 12006 7.900352 GTCTGATGTATCATCGTTTCTGTTTTC 59.100 37.037 5.47 0.00 36.02 2.29
5367 12022 3.816523 CTGTTTTCCATTTTTGCATGCCT 59.183 39.130 16.68 0.00 0.00 4.75
5401 12056 3.065371 GGCTTATGTTCCTCATGGTTTCG 59.935 47.826 0.00 0.00 37.91 3.46
5502 12157 0.456312 GTGGTAAGCTCGGTCTCACG 60.456 60.000 0.00 0.00 0.00 4.35
5518 12173 2.668457 CTCACGTACCATCTTTCTGTGC 59.332 50.000 0.00 0.00 0.00 4.57
5655 12313 2.820037 GCCGTGGTAAGCTCTGGC 60.820 66.667 0.00 0.00 39.06 4.85
5802 12460 2.487934 CGATGCTAGATTGAACTGGGG 58.512 52.381 0.00 0.00 0.00 4.96
5808 12466 0.040058 AGATTGAACTGGGGCATGCA 59.960 50.000 21.36 0.00 0.00 3.96
5811 12469 0.392336 TTGAACTGGGGCATGCAAAC 59.608 50.000 21.36 9.29 0.00 2.93
5812 12470 1.293179 GAACTGGGGCATGCAAACC 59.707 57.895 21.36 18.18 0.00 3.27
5838 12499 0.377554 CATGAAGCTAGCACTGCTGC 59.622 55.000 18.83 14.18 44.63 5.25
5851 12512 3.194861 CACTGCTGCGCTTAATTACCTA 58.805 45.455 9.73 0.00 0.00 3.08
5852 12513 3.621268 CACTGCTGCGCTTAATTACCTAA 59.379 43.478 9.73 0.00 0.00 2.69
5853 12514 4.273480 CACTGCTGCGCTTAATTACCTAAT 59.727 41.667 9.73 0.00 0.00 1.73
5854 12515 5.465390 CACTGCTGCGCTTAATTACCTAATA 59.535 40.000 9.73 0.00 0.00 0.98
5884 12545 1.808411 CTTACGGTGTTGCTCCATGT 58.192 50.000 0.00 0.00 0.00 3.21
5885 12546 2.933492 GCTTACGGTGTTGCTCCATGTA 60.933 50.000 0.00 0.00 0.00 2.29
6026 12697 6.385033 ACACCTAGTAGAACGTGTGAAATAC 58.615 40.000 9.17 0.00 38.02 1.89
6027 12698 5.803967 CACCTAGTAGAACGTGTGAAATACC 59.196 44.000 0.00 0.00 0.00 2.73
6028 12699 5.713861 ACCTAGTAGAACGTGTGAAATACCT 59.286 40.000 0.00 0.00 0.00 3.08
6029 12700 6.034591 CCTAGTAGAACGTGTGAAATACCTG 58.965 44.000 0.00 0.00 0.00 4.00
6030 12701 5.464030 AGTAGAACGTGTGAAATACCTGT 57.536 39.130 0.00 0.00 0.00 4.00
6031 12702 6.579666 AGTAGAACGTGTGAAATACCTGTA 57.420 37.500 0.00 0.00 0.00 2.74
6048 12719 1.338674 TGTATGTTTCAGCCTCCCGTG 60.339 52.381 0.00 0.00 0.00 4.94
6067 12738 5.039333 CCGTGTAGTTATCTCGGGTTTTAG 58.961 45.833 0.00 0.00 38.00 1.85
6084 12755 4.462508 TTTAGCTCTCTGTGGATGTGAG 57.537 45.455 0.00 0.00 0.00 3.51
6089 12760 0.738762 CTCTGTGGATGTGAGTGCCG 60.739 60.000 0.00 0.00 0.00 5.69
6120 12791 1.221466 TTGCTTCGAAGTCTGCCGTG 61.221 55.000 25.24 0.00 0.00 4.94
6168 12842 8.285891 AGACAGAGAAATTAGAGAAGGGAGATA 58.714 37.037 0.00 0.00 0.00 1.98
6201 12875 0.106918 GGTAATGCGGGGGATCACAA 60.107 55.000 0.00 0.00 0.00 3.33
6202 12876 1.021968 GTAATGCGGGGGATCACAAC 58.978 55.000 0.00 0.00 0.00 3.32
6228 12906 3.914312 TCTCATCTCGTGAACCTGTTTC 58.086 45.455 0.00 0.00 36.14 2.78
6229 12907 3.320826 TCTCATCTCGTGAACCTGTTTCA 59.679 43.478 0.00 0.00 42.26 2.69
6261 12939 0.966875 TTGGTTAGCCGCTCTCCGTA 60.967 55.000 0.00 0.00 37.67 4.02
6320 13002 6.631016 TCAGGAAGTACAGTGTAGCAAATAG 58.369 40.000 2.39 0.00 0.00 1.73
6484 13215 9.424319 CAAAATCTAGAATATACCTGTGCGTAT 57.576 33.333 0.00 0.00 33.52 3.06
6629 13367 3.701542 TCACTCTCACGAATCAATAGCCT 59.298 43.478 0.00 0.00 0.00 4.58
6630 13368 4.160439 TCACTCTCACGAATCAATAGCCTT 59.840 41.667 0.00 0.00 0.00 4.35
6631 13369 5.359860 TCACTCTCACGAATCAATAGCCTTA 59.640 40.000 0.00 0.00 0.00 2.69
6632 13370 5.689514 CACTCTCACGAATCAATAGCCTTAG 59.310 44.000 0.00 0.00 0.00 2.18
6633 13371 4.621991 TCTCACGAATCAATAGCCTTAGC 58.378 43.478 0.00 0.00 40.32 3.09
6634 13372 3.728845 TCACGAATCAATAGCCTTAGCC 58.271 45.455 0.00 0.00 41.25 3.93
6690 13431 2.883730 CCATGGACGGCGTGTACG 60.884 66.667 21.19 2.81 43.27 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 4.742201 CACCTGAGCCCCGTGTCG 62.742 72.222 0.00 0.00 0.00 4.35
2 3 4.394712 CCACCTGAGCCCCGTGTC 62.395 72.222 0.00 0.00 0.00 3.67
4 5 3.901797 GAACCACCTGAGCCCCGTG 62.902 68.421 0.00 0.00 0.00 4.94
6 7 2.484287 ATTGAACCACCTGAGCCCCG 62.484 60.000 0.00 0.00 0.00 5.73
7 8 0.251787 AATTGAACCACCTGAGCCCC 60.252 55.000 0.00 0.00 0.00 5.80
8 9 1.273327 CAAATTGAACCACCTGAGCCC 59.727 52.381 0.00 0.00 0.00 5.19
9 10 1.963515 ACAAATTGAACCACCTGAGCC 59.036 47.619 0.00 0.00 0.00 4.70
10 11 2.622942 TCACAAATTGAACCACCTGAGC 59.377 45.455 0.00 0.00 0.00 4.26
11 12 4.916983 TTCACAAATTGAACCACCTGAG 57.083 40.909 0.00 0.00 39.45 3.35
20 21 8.824159 TTTGAAGACAAAGTTCACAAATTGAA 57.176 26.923 0.00 0.00 40.02 2.69
21 22 8.824159 TTTTGAAGACAAAGTTCACAAATTGA 57.176 26.923 0.00 0.00 44.97 2.57
22 23 9.532697 CTTTTTGAAGACAAAGTTCACAAATTG 57.467 29.630 0.00 0.00 44.97 2.32
23 24 9.487790 TCTTTTTGAAGACAAAGTTCACAAATT 57.512 25.926 0.00 0.00 44.97 1.82
24 25 9.487790 TTCTTTTTGAAGACAAAGTTCACAAAT 57.512 25.926 0.00 0.00 44.97 2.32
25 26 8.879342 TTCTTTTTGAAGACAAAGTTCACAAA 57.121 26.923 0.00 0.00 44.97 2.83
26 27 8.879342 TTTCTTTTTGAAGACAAAGTTCACAA 57.121 26.923 0.00 0.00 44.97 3.33
27 28 8.879342 TTTTCTTTTTGAAGACAAAGTTCACA 57.121 26.923 0.00 0.00 44.97 3.58
28 29 9.191995 TCTTTTCTTTTTGAAGACAAAGTTCAC 57.808 29.630 15.26 0.00 44.97 3.18
29 30 9.757227 TTCTTTTCTTTTTGAAGACAAAGTTCA 57.243 25.926 15.26 0.00 44.97 3.18
45 46 9.573133 CGGTGCATATAGATTTTTCTTTTCTTT 57.427 29.630 0.00 0.00 0.00 2.52
46 47 7.702348 GCGGTGCATATAGATTTTTCTTTTCTT 59.298 33.333 0.00 0.00 0.00 2.52
47 48 7.067494 AGCGGTGCATATAGATTTTTCTTTTCT 59.933 33.333 0.00 0.00 0.00 2.52
48 49 7.196331 AGCGGTGCATATAGATTTTTCTTTTC 58.804 34.615 0.00 0.00 0.00 2.29
49 50 7.100458 AGCGGTGCATATAGATTTTTCTTTT 57.900 32.000 0.00 0.00 0.00 2.27
50 51 6.699575 AGCGGTGCATATAGATTTTTCTTT 57.300 33.333 0.00 0.00 0.00 2.52
51 52 6.318648 TCAAGCGGTGCATATAGATTTTTCTT 59.681 34.615 0.00 0.00 0.00 2.52
52 53 5.822519 TCAAGCGGTGCATATAGATTTTTCT 59.177 36.000 0.00 0.00 0.00 2.52
53 54 6.060028 TCAAGCGGTGCATATAGATTTTTC 57.940 37.500 0.00 0.00 0.00 2.29
54 55 5.009010 CCTCAAGCGGTGCATATAGATTTTT 59.991 40.000 0.00 0.00 0.00 1.94
63 64 1.264749 ACTCCCTCAAGCGGTGCATA 61.265 55.000 0.00 0.00 0.00 3.14
159 160 2.033141 TCAGTTGAGGCCAGCAGC 59.967 61.111 5.01 4.77 42.60 5.25
161 162 1.071987 CTGTCAGTTGAGGCCAGCA 59.928 57.895 5.01 0.00 0.00 4.41
188 189 1.337387 GTTCGAGGATAAGGAGGGACG 59.663 57.143 0.00 0.00 0.00 4.79
221 222 1.959226 GATTGCGTGGACGTGTGGT 60.959 57.895 0.00 0.00 42.22 4.16
229 230 4.380781 TTCGGGCGATTGCGTGGA 62.381 61.111 0.00 0.00 44.10 4.02
421 430 0.179029 GACGAGGAGGAGGAGGAGAG 60.179 65.000 0.00 0.00 0.00 3.20
422 431 1.637724 GGACGAGGAGGAGGAGGAGA 61.638 65.000 0.00 0.00 0.00 3.71
423 432 1.152839 GGACGAGGAGGAGGAGGAG 60.153 68.421 0.00 0.00 0.00 3.69
424 433 2.691779 GGGACGAGGAGGAGGAGGA 61.692 68.421 0.00 0.00 0.00 3.71
425 434 2.123640 GGGACGAGGAGGAGGAGG 60.124 72.222 0.00 0.00 0.00 4.30
426 435 2.123640 GGGGACGAGGAGGAGGAG 60.124 72.222 0.00 0.00 0.00 3.69
427 436 3.752167 GGGGGACGAGGAGGAGGA 61.752 72.222 0.00 0.00 0.00 3.71
796 820 1.726865 CAGTCGGTTGCAGCAAACA 59.273 52.632 23.02 7.54 29.18 2.83
885 909 4.011058 ACGCAAGGATATACAAAAACGC 57.989 40.909 0.00 0.00 46.39 4.84
892 916 4.218635 GGAGATGAGACGCAAGGATATACA 59.781 45.833 0.00 0.00 46.39 2.29
893 917 4.461081 AGGAGATGAGACGCAAGGATATAC 59.539 45.833 0.00 0.00 46.39 1.47
894 918 4.667573 AGGAGATGAGACGCAAGGATATA 58.332 43.478 0.00 0.00 46.39 0.86
895 919 3.505386 AGGAGATGAGACGCAAGGATAT 58.495 45.455 0.00 0.00 46.39 1.63
924 948 4.910458 ACACAGAAATAAGGTAGGCACT 57.090 40.909 0.00 0.00 46.37 4.40
925 949 5.731591 AGTACACAGAAATAAGGTAGGCAC 58.268 41.667 0.00 0.00 0.00 5.01
926 950 6.368779 AAGTACACAGAAATAAGGTAGGCA 57.631 37.500 0.00 0.00 0.00 4.75
927 951 6.653740 ACAAAGTACACAGAAATAAGGTAGGC 59.346 38.462 0.00 0.00 0.00 3.93
928 952 8.617290 AACAAAGTACACAGAAATAAGGTAGG 57.383 34.615 0.00 0.00 0.00 3.18
951 975 1.468736 GGCAAGAGCAGCAGCATAAAC 60.469 52.381 3.17 0.00 45.49 2.01
999 1023 4.981647 TCCACCCTTTGGTATCTATCCATT 59.018 41.667 0.00 0.00 45.57 3.16
1044 1068 6.737899 TGATCCTGATCTCATTCTCACGAATG 60.738 42.308 8.50 8.38 44.08 2.67
1128 1152 1.106285 GACAAAGCATAGCAAGGGGG 58.894 55.000 0.00 0.00 0.00 5.40
1177 1201 9.929722 CGAGCATACAAATAAATTACTGCTTAA 57.070 29.630 0.00 0.00 38.72 1.85
1191 1215 9.691362 ATAAAAAGTTGAAACGAGCATACAAAT 57.309 25.926 0.00 0.00 0.00 2.32
1235 1259 1.402968 CGAGGCATTTCCCAGATTGTG 59.597 52.381 0.00 0.00 34.51 3.33
1260 1284 0.029681 AGCAGTGTCCCATATCCCCT 60.030 55.000 0.00 0.00 0.00 4.79
1310 1358 1.798813 CTCGGTGGCAACTAGAAACAC 59.201 52.381 0.00 0.00 37.61 3.32
1311 1359 1.414919 ACTCGGTGGCAACTAGAAACA 59.585 47.619 11.45 0.00 37.61 2.83
1312 1360 2.165319 ACTCGGTGGCAACTAGAAAC 57.835 50.000 11.45 0.00 37.61 2.78
1313 1361 3.512329 TCATACTCGGTGGCAACTAGAAA 59.488 43.478 11.45 0.00 37.61 2.52
1314 1362 3.093814 TCATACTCGGTGGCAACTAGAA 58.906 45.455 11.45 0.00 37.61 2.10
1319 1367 2.024176 ACATCATACTCGGTGGCAAC 57.976 50.000 0.00 0.00 0.00 4.17
1372 1423 3.055719 CCTTGGCAACGCACGGAT 61.056 61.111 0.00 0.00 42.51 4.18
1404 1463 9.573166 CCCATATGATCCTCTTATTGTGTTAAA 57.427 33.333 3.65 0.00 0.00 1.52
1432 1491 8.522003 TGTCTATTTGCTTTGCATCAAGATTTA 58.478 29.630 2.23 0.00 38.76 1.40
1660 1722 8.382130 CGGTCCATCAATAAATTGTTTTTGATG 58.618 33.333 18.11 18.11 38.57 3.07
1661 1723 8.093927 ACGGTCCATCAATAAATTGTTTTTGAT 58.906 29.630 2.80 0.00 38.84 2.57
1662 1724 7.383572 CACGGTCCATCAATAAATTGTTTTTGA 59.616 33.333 2.80 0.00 38.84 2.69
1663 1725 7.359933 CCACGGTCCATCAATAAATTGTTTTTG 60.360 37.037 2.80 0.00 38.84 2.44
1678 2460 3.081804 AGAAACAAATCCACGGTCCATC 58.918 45.455 0.00 0.00 0.00 3.51
1759 2541 0.178964 TGGCTTTTCACCCCTTCTGG 60.179 55.000 0.00 0.00 0.00 3.86
1968 4925 5.127682 ACAAAGACAAACTGAAAGGCTTCAT 59.872 36.000 0.00 0.00 40.78 2.57
2004 4962 1.266175 CAGGCATCAAGATCGAATGGC 59.734 52.381 17.78 17.78 37.97 4.40
2118 5079 9.136323 AGGTTTTCAGAAAATAATGACTGAAGT 57.864 29.630 11.54 0.00 45.57 3.01
2258 5223 9.658475 CCTGAAAAATGCATGCAAATAAATATG 57.342 29.630 26.68 10.02 0.00 1.78
3083 6082 1.448540 GTCGTGTCTGAGGGCCATG 60.449 63.158 6.18 0.00 0.00 3.66
3158 6275 9.684702 TCTTATAATTCTTTACAGGGGGAGTAT 57.315 33.333 0.00 0.00 0.00 2.12
3159 6276 9.155785 CTCTTATAATTCTTTACAGGGGGAGTA 57.844 37.037 0.00 0.00 0.00 2.59
3160 6277 7.420330 GCTCTTATAATTCTTTACAGGGGGAGT 60.420 40.741 0.00 0.00 0.00 3.85
3161 6278 6.937465 GCTCTTATAATTCTTTACAGGGGGAG 59.063 42.308 0.00 0.00 0.00 4.30
3162 6279 6.463897 CGCTCTTATAATTCTTTACAGGGGGA 60.464 42.308 0.00 0.00 0.00 4.81
3163 6280 5.701290 CGCTCTTATAATTCTTTACAGGGGG 59.299 44.000 0.00 0.00 0.00 5.40
3164 6281 6.289064 ACGCTCTTATAATTCTTTACAGGGG 58.711 40.000 0.00 0.00 0.00 4.79
3165 6282 7.787725 AACGCTCTTATAATTCTTTACAGGG 57.212 36.000 0.00 0.00 0.00 4.45
3196 6313 5.183522 AGAGCGTTTAGAGCACTAAAGTAGT 59.816 40.000 15.49 2.81 45.42 2.73
3197 6314 5.642686 AGAGCGTTTAGAGCACTAAAGTAG 58.357 41.667 15.49 11.36 45.42 2.57
3198 6315 5.640189 AGAGCGTTTAGAGCACTAAAGTA 57.360 39.130 15.49 0.00 45.42 2.24
3199 6316 4.522722 AGAGCGTTTAGAGCACTAAAGT 57.477 40.909 15.49 5.02 45.42 2.66
3200 6317 8.804688 ATATAAGAGCGTTTAGAGCACTAAAG 57.195 34.615 15.49 11.09 45.42 1.85
3201 6318 9.595823 AAATATAAGAGCGTTTAGAGCACTAAA 57.404 29.630 11.71 11.71 43.52 1.85
3202 6319 9.245962 GAAATATAAGAGCGTTTAGAGCACTAA 57.754 33.333 0.00 0.00 34.59 2.24
3203 6320 8.630917 AGAAATATAAGAGCGTTTAGAGCACTA 58.369 33.333 0.00 0.00 34.59 2.74
3204 6321 7.493367 AGAAATATAAGAGCGTTTAGAGCACT 58.507 34.615 0.00 0.00 37.13 4.40
3205 6322 7.701809 AGAAATATAAGAGCGTTTAGAGCAC 57.298 36.000 0.00 0.00 37.01 4.40
3206 6323 8.718102 AAAGAAATATAAGAGCGTTTAGAGCA 57.282 30.769 0.00 0.00 37.01 4.26
3212 6329 9.057089 CCTCCATAAAGAAATATAAGAGCGTTT 57.943 33.333 0.00 0.00 0.00 3.60
3213 6330 7.661847 CCCTCCATAAAGAAATATAAGAGCGTT 59.338 37.037 0.00 0.00 0.00 4.84
3214 6331 7.016268 TCCCTCCATAAAGAAATATAAGAGCGT 59.984 37.037 0.00 0.00 0.00 5.07
3215 6332 7.386851 TCCCTCCATAAAGAAATATAAGAGCG 58.613 38.462 0.00 0.00 0.00 5.03
3216 6333 8.379331 ACTCCCTCCATAAAGAAATATAAGAGC 58.621 37.037 0.00 0.00 0.00 4.09
3226 6343 8.582437 CGTATTATGTACTCCCTCCATAAAGAA 58.418 37.037 0.00 0.00 35.40 2.52
3227 6344 7.177921 CCGTATTATGTACTCCCTCCATAAAGA 59.822 40.741 0.00 0.00 35.40 2.52
3228 6345 7.039223 ACCGTATTATGTACTCCCTCCATAAAG 60.039 40.741 0.00 0.00 35.40 1.85
3229 6346 6.783977 ACCGTATTATGTACTCCCTCCATAAA 59.216 38.462 0.00 0.00 35.40 1.40
3230 6347 6.317312 ACCGTATTATGTACTCCCTCCATAA 58.683 40.000 0.00 0.00 36.00 1.90
3231 6348 5.895807 ACCGTATTATGTACTCCCTCCATA 58.104 41.667 0.00 0.00 0.00 2.74
3232 6349 4.748701 ACCGTATTATGTACTCCCTCCAT 58.251 43.478 0.00 0.00 0.00 3.41
3233 6350 4.188937 ACCGTATTATGTACTCCCTCCA 57.811 45.455 0.00 0.00 0.00 3.86
3234 6351 7.115414 AGTATACCGTATTATGTACTCCCTCC 58.885 42.308 0.00 0.00 0.00 4.30
3235 6352 7.281999 GGAGTATACCGTATTATGTACTCCCTC 59.718 44.444 18.92 3.43 46.32 4.30
3236 6353 7.115414 GGAGTATACCGTATTATGTACTCCCT 58.885 42.308 18.92 0.00 46.32 4.20
3237 6354 7.326968 GGAGTATACCGTATTATGTACTCCC 57.673 44.000 18.92 7.88 46.32 4.30
3255 6372 6.947376 AAAGTACAGGGTGTAAAGGAGTAT 57.053 37.500 0.00 0.00 34.21 2.12
3276 6393 5.398603 AACAAACCAGTCACATGTGAAAA 57.601 34.783 29.42 5.81 41.85 2.29
3284 6401 4.164604 AGGTAGGTAAACAAACCAGTCACA 59.835 41.667 6.05 0.00 42.40 3.58
3355 6472 8.362639 ACAGAAAAATAGCAATTGATGACTTGT 58.637 29.630 10.34 0.88 0.00 3.16
3356 6473 8.644619 CACAGAAAAATAGCAATTGATGACTTG 58.355 33.333 10.34 0.27 0.00 3.16
3357 6474 7.330208 GCACAGAAAAATAGCAATTGATGACTT 59.670 33.333 10.34 0.00 0.00 3.01
3364 6481 6.146510 ACACATGCACAGAAAAATAGCAATTG 59.853 34.615 0.00 0.00 38.85 2.32
3393 6510 5.523552 GCTATAAAAATTTGGATGGTGTGGC 59.476 40.000 0.00 0.00 0.00 5.01
3465 6582 1.539560 GCAGGGCAGAGTGACTCTCA 61.540 60.000 13.05 0.00 44.98 3.27
3466 6583 1.217779 GCAGGGCAGAGTGACTCTC 59.782 63.158 13.05 7.73 38.99 3.20
3467 6584 1.123861 TTGCAGGGCAGAGTGACTCT 61.124 55.000 9.77 9.77 42.11 3.24
3468 6585 0.952984 GTTGCAGGGCAGAGTGACTC 60.953 60.000 3.98 3.98 40.61 3.36
3513 6630 8.941977 AGTTGAGCGTGTCATAAATTAAATGTA 58.058 29.630 1.79 0.00 34.17 2.29
3572 6689 9.508642 CCCCCTCAAGATTTAAACTATTCTATC 57.491 37.037 0.00 0.00 0.00 2.08
3597 6714 7.039714 GGGAGTAAATGATACCCAATGAATTCC 60.040 40.741 2.27 0.00 40.20 3.01
3616 6733 5.767277 AAAATTAGGAACGGAGGGAGTAA 57.233 39.130 0.00 0.00 0.00 2.24
3617 6734 5.767277 AAAAATTAGGAACGGAGGGAGTA 57.233 39.130 0.00 0.00 0.00 2.59
3618 6735 4.652679 AAAAATTAGGAACGGAGGGAGT 57.347 40.909 0.00 0.00 0.00 3.85
3639 6756 9.965824 GTCCATTTGAAATCTCTAAAAAGACAA 57.034 29.630 0.00 0.00 0.00 3.18
3640 6757 9.354673 AGTCCATTTGAAATCTCTAAAAAGACA 57.645 29.630 0.00 0.00 0.00 3.41
3644 6761 9.581289 TGGTAGTCCATTTGAAATCTCTAAAAA 57.419 29.630 0.00 0.00 39.03 1.94
3645 6762 9.010029 GTGGTAGTCCATTTGAAATCTCTAAAA 57.990 33.333 0.00 0.00 46.20 1.52
3646 6763 8.160765 TGTGGTAGTCCATTTGAAATCTCTAAA 58.839 33.333 0.00 0.00 46.20 1.85
3647 6764 7.685481 TGTGGTAGTCCATTTGAAATCTCTAA 58.315 34.615 0.00 0.00 46.20 2.10
3648 6765 7.252612 TGTGGTAGTCCATTTGAAATCTCTA 57.747 36.000 0.00 0.00 46.20 2.43
3649 6766 6.126863 TGTGGTAGTCCATTTGAAATCTCT 57.873 37.500 0.00 0.00 46.20 3.10
3650 6767 7.552687 TGTATGTGGTAGTCCATTTGAAATCTC 59.447 37.037 0.00 0.00 46.20 2.75
3651 6768 7.402054 TGTATGTGGTAGTCCATTTGAAATCT 58.598 34.615 0.00 0.00 46.20 2.40
3652 6769 7.552687 TCTGTATGTGGTAGTCCATTTGAAATC 59.447 37.037 0.00 0.00 46.20 2.17
3653 6770 7.402054 TCTGTATGTGGTAGTCCATTTGAAAT 58.598 34.615 0.00 0.00 46.20 2.17
3654 6771 6.774673 TCTGTATGTGGTAGTCCATTTGAAA 58.225 36.000 0.00 0.00 46.20 2.69
3655 6772 6.367374 TCTGTATGTGGTAGTCCATTTGAA 57.633 37.500 0.00 0.00 46.20 2.69
3656 6773 6.070251 ACATCTGTATGTGGTAGTCCATTTGA 60.070 38.462 0.00 0.00 44.79 2.69
3657 6774 6.115446 ACATCTGTATGTGGTAGTCCATTTG 58.885 40.000 0.00 0.00 44.79 2.32
3658 6775 6.313519 ACATCTGTATGTGGTAGTCCATTT 57.686 37.500 0.00 0.00 44.79 2.32
3659 6776 5.957771 ACATCTGTATGTGGTAGTCCATT 57.042 39.130 0.00 0.00 44.79 3.16
3660 6777 8.901472 ATATACATCTGTATGTGGTAGTCCAT 57.099 34.615 12.10 0.00 45.99 3.41
3661 6778 9.462606 CTATATACATCTGTATGTGGTAGTCCA 57.537 37.037 12.10 0.00 45.99 4.02
3662 6779 9.682465 TCTATATACATCTGTATGTGGTAGTCC 57.318 37.037 12.10 0.00 45.99 3.85
3687 6804 9.817809 TGGTGAATCTACACTCTAAAATATGTC 57.182 33.333 0.00 0.00 40.22 3.06
3694 6811 9.871238 GACTATTTGGTGAATCTACACTCTAAA 57.129 33.333 0.00 0.00 40.22 1.85
3695 6812 8.188799 CGACTATTTGGTGAATCTACACTCTAA 58.811 37.037 0.00 0.00 40.22 2.10
3696 6813 7.338703 ACGACTATTTGGTGAATCTACACTCTA 59.661 37.037 0.00 0.00 40.22 2.43
3697 6814 6.153000 ACGACTATTTGGTGAATCTACACTCT 59.847 38.462 0.00 0.00 40.22 3.24
3698 6815 6.331061 ACGACTATTTGGTGAATCTACACTC 58.669 40.000 0.00 0.00 40.22 3.51
3699 6816 6.282199 ACGACTATTTGGTGAATCTACACT 57.718 37.500 0.00 0.00 40.22 3.55
3700 6817 6.963049 AACGACTATTTGGTGAATCTACAC 57.037 37.500 0.00 0.00 39.70 2.90
3701 6818 7.802738 CAAAACGACTATTTGGTGAATCTACA 58.197 34.615 0.00 0.00 34.81 2.74
3761 6878 2.947243 GCCATCCCAAAGCATCTTCTGA 60.947 50.000 0.00 0.00 0.00 3.27
3784 6901 5.513141 CACCTCGCACTAATACATCGATATG 59.487 44.000 0.00 0.00 39.17 1.78
3808 6925 2.960819 ACAACGAACTCACCTATCTGC 58.039 47.619 0.00 0.00 0.00 4.26
3882 6999 1.092921 AGCAAAAACGCGTCCTGTGA 61.093 50.000 14.44 0.00 36.85 3.58
3887 7004 1.299089 AAGCAGCAAAAACGCGTCC 60.299 52.632 14.44 0.00 36.85 4.79
4128 7401 7.444299 GGAGAGAGAGAGAGCATAAATCAATT 58.556 38.462 0.00 0.00 0.00 2.32
4129 7402 6.014327 GGGAGAGAGAGAGAGCATAAATCAAT 60.014 42.308 0.00 0.00 0.00 2.57
4173 7450 9.448587 AGAGGGAGTACTACATATTGGTTAATT 57.551 33.333 7.57 0.00 0.00 1.40
4199 7476 8.197592 TCTAATACACAGAGTAAAAAGGACCA 57.802 34.615 0.00 0.00 36.05 4.02
4219 7496 8.981647 GCAAATTTGACTTGACACAAATCTAAT 58.018 29.630 22.31 0.00 43.07 1.73
4565 7847 7.406031 TCATACTACTCCGTTCAAATCTTCT 57.594 36.000 0.00 0.00 0.00 2.85
4804 11453 0.179000 AGAGCGGATTTTCAGCGGAT 59.821 50.000 0.00 0.00 42.41 4.18
4825 11474 6.734104 ACAGAGCAAAATGAGTGAATCTAC 57.266 37.500 0.00 0.00 0.00 2.59
4826 11475 8.043113 ACATACAGAGCAAAATGAGTGAATCTA 58.957 33.333 0.00 0.00 0.00 1.98
4827 11476 6.883217 ACATACAGAGCAAAATGAGTGAATCT 59.117 34.615 0.00 0.00 0.00 2.40
4828 11477 7.081526 ACATACAGAGCAAAATGAGTGAATC 57.918 36.000 0.00 0.00 0.00 2.52
4829 11478 7.826252 ACTACATACAGAGCAAAATGAGTGAAT 59.174 33.333 0.00 0.00 0.00 2.57
4830 11479 7.161404 ACTACATACAGAGCAAAATGAGTGAA 58.839 34.615 0.00 0.00 0.00 3.18
4831 11480 6.701340 ACTACATACAGAGCAAAATGAGTGA 58.299 36.000 0.00 0.00 0.00 3.41
4832 11481 6.591448 TGACTACATACAGAGCAAAATGAGTG 59.409 38.462 0.00 0.00 0.00 3.51
4833 11482 6.591834 GTGACTACATACAGAGCAAAATGAGT 59.408 38.462 0.00 0.00 0.00 3.41
4834 11483 6.815641 AGTGACTACATACAGAGCAAAATGAG 59.184 38.462 0.00 0.00 0.00 2.90
4835 11484 6.701340 AGTGACTACATACAGAGCAAAATGA 58.299 36.000 0.00 0.00 0.00 2.57
4836 11485 6.974932 AGTGACTACATACAGAGCAAAATG 57.025 37.500 0.00 0.00 0.00 2.32
4837 11486 6.936900 ACAAGTGACTACATACAGAGCAAAAT 59.063 34.615 0.00 0.00 0.00 1.82
4838 11487 6.288294 ACAAGTGACTACATACAGAGCAAAA 58.712 36.000 0.00 0.00 0.00 2.44
4839 11488 5.853936 ACAAGTGACTACATACAGAGCAAA 58.146 37.500 0.00 0.00 0.00 3.68
4840 11489 5.468540 ACAAGTGACTACATACAGAGCAA 57.531 39.130 0.00 0.00 0.00 3.91
4841 11490 4.379499 CGACAAGTGACTACATACAGAGCA 60.379 45.833 0.00 0.00 0.00 4.26
4842 11491 4.099120 CGACAAGTGACTACATACAGAGC 58.901 47.826 0.00 0.00 0.00 4.09
4843 11492 5.547181 TCGACAAGTGACTACATACAGAG 57.453 43.478 0.00 0.00 0.00 3.35
4844 11493 5.952526 TTCGACAAGTGACTACATACAGA 57.047 39.130 0.00 0.00 0.00 3.41
4845 11494 7.030165 AGATTTCGACAAGTGACTACATACAG 58.970 38.462 0.00 0.00 0.00 2.74
4846 11495 6.920817 AGATTTCGACAAGTGACTACATACA 58.079 36.000 0.00 0.00 0.00 2.29
4847 11496 7.251994 AGAGATTTCGACAAGTGACTACATAC 58.748 38.462 0.00 0.00 0.00 2.39
4848 11497 7.392494 AGAGATTTCGACAAGTGACTACATA 57.608 36.000 0.00 0.00 0.00 2.29
4849 11498 6.274157 AGAGATTTCGACAAGTGACTACAT 57.726 37.500 0.00 0.00 0.00 2.29
4850 11499 5.707242 AGAGATTTCGACAAGTGACTACA 57.293 39.130 0.00 0.00 0.00 2.74
4851 11500 7.074507 TCTAGAGATTTCGACAAGTGACTAC 57.925 40.000 0.00 0.00 0.00 2.73
4852 11501 7.683437 TTCTAGAGATTTCGACAAGTGACTA 57.317 36.000 0.00 0.00 0.00 2.59
4853 11502 6.576662 TTCTAGAGATTTCGACAAGTGACT 57.423 37.500 0.00 0.00 0.00 3.41
4854 11503 7.061326 GTCTTTCTAGAGATTTCGACAAGTGAC 59.939 40.741 0.00 0.00 0.00 3.67
4855 11504 7.085116 GTCTTTCTAGAGATTTCGACAAGTGA 58.915 38.462 0.00 0.00 0.00 3.41
4856 11505 6.863645 TGTCTTTCTAGAGATTTCGACAAGTG 59.136 38.462 0.00 0.00 0.00 3.16
4857 11506 6.982852 TGTCTTTCTAGAGATTTCGACAAGT 58.017 36.000 0.00 0.00 0.00 3.16
4858 11507 7.875316 TTGTCTTTCTAGAGATTTCGACAAG 57.125 36.000 10.14 1.62 35.84 3.16
4859 11508 8.833231 ATTTGTCTTTCTAGAGATTTCGACAA 57.167 30.769 10.14 10.14 38.08 3.18
4870 11519 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
4871 11520 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
4872 11521 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
4873 11522 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
4874 11523 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
4875 11524 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
4876 11525 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
4877 11526 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
4878 11527 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
4879 11528 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
4880 11529 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
4881 11530 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
4882 11531 6.141790 ACTACTCCCTCCGTTCCTAAATATT 58.858 40.000 0.00 0.00 0.00 1.28
4883 11532 5.713807 ACTACTCCCTCCGTTCCTAAATAT 58.286 41.667 0.00 0.00 0.00 1.28
4884 11533 5.134725 ACTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
4885 11534 3.991683 ACTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
4886 11535 3.463048 ACTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
4887 11536 3.463048 AACTACTCCCTCCGTTCCTAA 57.537 47.619 0.00 0.00 0.00 2.69
4888 11537 3.463048 AAACTACTCCCTCCGTTCCTA 57.537 47.619 0.00 0.00 0.00 2.94
4889 11538 2.322339 AAACTACTCCCTCCGTTCCT 57.678 50.000 0.00 0.00 0.00 3.36
4890 11539 2.566279 AGAAAACTACTCCCTCCGTTCC 59.434 50.000 0.00 0.00 0.00 3.62
4891 11540 3.957591 AGAAAACTACTCCCTCCGTTC 57.042 47.619 0.00 0.00 0.00 3.95
4892 11541 3.806157 GCAAGAAAACTACTCCCTCCGTT 60.806 47.826 0.00 0.00 0.00 4.44
4893 11542 2.289506 GCAAGAAAACTACTCCCTCCGT 60.290 50.000 0.00 0.00 0.00 4.69
4894 11543 2.289444 TGCAAGAAAACTACTCCCTCCG 60.289 50.000 0.00 0.00 0.00 4.63
4895 11544 3.418684 TGCAAGAAAACTACTCCCTCC 57.581 47.619 0.00 0.00 0.00 4.30
4896 11545 5.249420 AGAATGCAAGAAAACTACTCCCTC 58.751 41.667 0.00 0.00 0.00 4.30
4897 11546 5.248380 AGAATGCAAGAAAACTACTCCCT 57.752 39.130 0.00 0.00 0.00 4.20
4898 11547 6.655425 ACTTAGAATGCAAGAAAACTACTCCC 59.345 38.462 0.00 0.00 0.00 4.30
4899 11548 7.674471 ACTTAGAATGCAAGAAAACTACTCC 57.326 36.000 0.00 0.00 0.00 3.85
4900 11549 8.774586 TGAACTTAGAATGCAAGAAAACTACTC 58.225 33.333 0.00 0.00 0.00 2.59
4901 11550 8.560374 GTGAACTTAGAATGCAAGAAAACTACT 58.440 33.333 0.00 0.00 0.00 2.57
4902 11551 8.342634 TGTGAACTTAGAATGCAAGAAAACTAC 58.657 33.333 0.00 0.00 0.00 2.73
4931 11580 5.143376 CAGAAAATGGAGCCAATTGAAGT 57.857 39.130 7.12 0.00 0.00 3.01
5011 11661 8.752187 ACATAGTTTTCCATATGATTTGTTGCT 58.248 29.630 3.65 0.00 34.24 3.91
5050 11704 9.603298 CATTGCTAATAGCTGTACATGTTTATG 57.397 33.333 13.88 0.00 42.97 1.90
5192 11846 3.299977 CCACGTCGACCACCTCCA 61.300 66.667 10.58 0.00 0.00 3.86
5246 11900 1.000283 CCCTGCTCTTCATAGTAGCCG 60.000 57.143 0.00 0.00 35.33 5.52
5263 11917 1.134098 CGCCATCAAAGTATCCACCCT 60.134 52.381 0.00 0.00 0.00 4.34
5340 11994 5.462034 TGCAAAAATGGAAAACAGAAACG 57.538 34.783 0.00 0.00 0.00 3.60
5352 12006 4.340097 TGAGATAGAGGCATGCAAAAATGG 59.660 41.667 21.36 0.00 0.00 3.16
5502 12157 4.798574 CAAAAGGCACAGAAAGATGGTAC 58.201 43.478 0.00 0.00 0.00 3.34
5518 12173 0.978907 AGGAAAGGGCATGCAAAAGG 59.021 50.000 21.36 0.00 0.00 3.11
5655 12313 3.183172 GCACAGCACTATGATATGTCACG 59.817 47.826 0.00 0.00 37.14 4.35
5687 12345 1.710816 GAGTGATGAGAGGTAGGGGG 58.289 60.000 0.00 0.00 0.00 5.40
5808 12466 1.181098 AGCTTCATGGCTTGCGGTTT 61.181 50.000 0.00 0.00 39.86 3.27
5811 12469 2.020131 CTAGCTTCATGGCTTGCGG 58.980 57.895 1.62 0.00 42.97 5.69
5812 12470 1.354506 GCTAGCTTCATGGCTTGCG 59.645 57.895 7.70 0.84 46.58 4.85
5851 12512 6.091718 ACACCGTAAGCAAAAACCATTATT 57.908 33.333 0.00 0.00 0.00 1.40
5852 12513 5.715434 ACACCGTAAGCAAAAACCATTAT 57.285 34.783 0.00 0.00 0.00 1.28
5853 12514 5.282510 CAACACCGTAAGCAAAAACCATTA 58.717 37.500 0.00 0.00 0.00 1.90
5854 12515 4.116238 CAACACCGTAAGCAAAAACCATT 58.884 39.130 0.00 0.00 0.00 3.16
5884 12545 0.033503 TCACGTCAGAGAGCCCCATA 60.034 55.000 0.00 0.00 0.00 2.74
5885 12546 0.904865 TTCACGTCAGAGAGCCCCAT 60.905 55.000 0.00 0.00 0.00 4.00
5951 12622 2.238521 CAAACCACAGGTAAGCCACAT 58.761 47.619 0.00 0.00 33.12 3.21
6026 12697 1.743772 CGGGAGGCTGAAACATACAGG 60.744 57.143 0.00 0.00 36.09 4.00
6027 12698 1.066143 ACGGGAGGCTGAAACATACAG 60.066 52.381 0.00 0.00 38.27 2.74
6028 12699 0.981183 ACGGGAGGCTGAAACATACA 59.019 50.000 0.00 0.00 0.00 2.29
6029 12700 1.338769 ACACGGGAGGCTGAAACATAC 60.339 52.381 0.00 0.00 0.00 2.39
6030 12701 0.981183 ACACGGGAGGCTGAAACATA 59.019 50.000 0.00 0.00 0.00 2.29
6031 12702 0.981183 TACACGGGAGGCTGAAACAT 59.019 50.000 0.00 0.00 0.00 2.71
6048 12719 6.039605 AGAGAGCTAAAACCCGAGATAACTAC 59.960 42.308 0.00 0.00 0.00 2.73
6067 12738 2.006056 GCACTCACATCCACAGAGAGC 61.006 57.143 0.00 0.00 38.44 4.09
6089 12760 2.413837 TCGAAGCAAACAAGCCTACTC 58.586 47.619 0.00 0.00 34.23 2.59
6120 12791 1.195674 GCTCCAACAAGCGAAAGAGAC 59.804 52.381 0.00 0.00 31.56 3.36
6168 12842 3.502211 CGCATTACCAAACTCTCACCTTT 59.498 43.478 0.00 0.00 0.00 3.11
6201 12875 5.127845 ACAGGTTCACGAGATGAGATTATGT 59.872 40.000 0.00 0.00 38.99 2.29
6202 12876 5.595885 ACAGGTTCACGAGATGAGATTATG 58.404 41.667 0.00 0.00 38.99 1.90
6228 12906 3.243068 GCTAACCAAACAGTCCAACAGTG 60.243 47.826 0.00 0.00 0.00 3.66
6229 12907 2.949644 GCTAACCAAACAGTCCAACAGT 59.050 45.455 0.00 0.00 0.00 3.55
6230 12908 2.293399 GGCTAACCAAACAGTCCAACAG 59.707 50.000 0.00 0.00 35.26 3.16
6231 12909 2.303175 GGCTAACCAAACAGTCCAACA 58.697 47.619 0.00 0.00 35.26 3.33
6232 12910 1.265905 CGGCTAACCAAACAGTCCAAC 59.734 52.381 0.00 0.00 34.57 3.77
6233 12911 1.600023 CGGCTAACCAAACAGTCCAA 58.400 50.000 0.00 0.00 34.57 3.53
6234 12912 0.887387 GCGGCTAACCAAACAGTCCA 60.887 55.000 0.00 0.00 34.57 4.02
6235 12913 0.605589 AGCGGCTAACCAAACAGTCC 60.606 55.000 0.00 0.00 34.57 3.85
6236 12914 0.796927 GAGCGGCTAACCAAACAGTC 59.203 55.000 0.60 0.00 34.57 3.51
6299 12977 5.731591 ACCTATTTGCTACACTGTACTTCC 58.268 41.667 0.00 0.00 0.00 3.46
6320 13002 1.599542 GCGATGGCTGAAATCTGTACC 59.400 52.381 0.00 0.00 35.83 3.34
6330 13012 1.086696 GCTTAGTTTGCGATGGCTGA 58.913 50.000 0.15 0.00 40.82 4.26
6484 13215 3.227614 TCTTCTGCAGGCCGTGTATATA 58.772 45.455 15.13 0.00 0.00 0.86
6629 13367 1.213296 GGGAGGAAGATGTGGGCTAA 58.787 55.000 0.00 0.00 0.00 3.09
6630 13368 0.694444 GGGGAGGAAGATGTGGGCTA 60.694 60.000 0.00 0.00 0.00 3.93
6631 13369 2.003548 GGGGAGGAAGATGTGGGCT 61.004 63.158 0.00 0.00 0.00 5.19
6632 13370 2.308722 TGGGGAGGAAGATGTGGGC 61.309 63.158 0.00 0.00 0.00 5.36
6633 13371 0.916358 AGTGGGGAGGAAGATGTGGG 60.916 60.000 0.00 0.00 0.00 4.61
6634 13372 0.995024 AAGTGGGGAGGAAGATGTGG 59.005 55.000 0.00 0.00 0.00 4.17
6732 13473 2.772691 CGACGAGGAGGCAGGGTAC 61.773 68.421 0.00 0.00 0.00 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.