Multiple sequence alignment - TraesCS4D01G108000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G108000 chr4D 100.000 6808 0 0 1 6808 87542279 87549086 0.000000e+00 12573.0
1 TraesCS4D01G108000 chr4D 93.513 4316 224 30 2013 6298 85995579 85999868 0.000000e+00 6368.0
2 TraesCS4D01G108000 chr4D 88.913 1371 98 25 1 1346 85994116 85995457 0.000000e+00 1640.0
3 TraesCS4D01G108000 chr4D 93.684 95 3 3 1608 1700 85995484 85995577 9.210000e-29 139.0
4 TraesCS4D01G108000 chr4A 93.517 4365 186 39 1991 6298 500140956 500145280 0.000000e+00 6403.0
5 TraesCS4D01G108000 chr4A 94.141 1741 68 10 11 1722 500139212 500140947 0.000000e+00 2619.0
6 TraesCS4D01G108000 chr4B 91.848 4367 238 47 2012 6298 123499175 123503503 0.000000e+00 5984.0
7 TraesCS4D01G108000 chr4B 90.773 1138 80 15 216 1346 123497935 123499054 0.000000e+00 1496.0
8 TraesCS4D01G108000 chr4B 93.651 945 43 8 2483 3413 578033074 578032133 0.000000e+00 1397.0
9 TraesCS4D01G108000 chr4B 93.396 212 11 3 1 210 123497534 123497744 1.840000e-80 311.0
10 TraesCS4D01G108000 chr4B 90.830 229 8 9 6429 6644 34783350 34783578 1.860000e-75 294.0
11 TraesCS4D01G108000 chr4B 85.841 226 20 6 6429 6642 34788639 34788414 5.310000e-56 230.0
12 TraesCS4D01G108000 chr4B 94.845 97 2 3 1608 1702 123499081 123499176 1.530000e-31 148.0
13 TraesCS4D01G108000 chr4B 89.655 58 6 0 6749 6806 34783934 34783991 2.630000e-09 75.0
14 TraesCS4D01G108000 chr4B 88.333 60 7 0 6749 6808 34783788 34783847 9.470000e-09 73.1
15 TraesCS4D01G108000 chr4B 90.909 55 3 2 1973 2027 237272764 237272712 9.470000e-09 73.1
16 TraesCS4D01G108000 chr5D 89.901 406 28 7 3015 3413 21674876 21675275 1.690000e-140 510.0
17 TraesCS4D01G108000 chr5D 97.273 220 5 1 1757 1975 7044417 7044198 8.340000e-99 372.0
18 TraesCS4D01G108000 chr5D 91.379 58 2 3 1973 2030 125803517 125803571 7.320000e-10 76.8
19 TraesCS4D01G108000 chr5D 87.097 62 6 2 1973 2034 9123936 9123877 1.230000e-07 69.4
20 TraesCS4D01G108000 chr1D 93.558 326 9 6 6429 6742 468576107 468576432 6.180000e-130 475.0
21 TraesCS4D01G108000 chr1D 100.000 60 0 0 6749 6808 468576510 468576569 2.010000e-20 111.0
22 TraesCS4D01G108000 chr1D 96.970 33 1 0 360 392 63925371 63925339 1.000000e-03 56.5
23 TraesCS4D01G108000 chr1D 96.970 33 1 0 360 392 194469129 194469161 1.000000e-03 56.5
24 TraesCS4D01G108000 chr2B 92.966 327 10 3 6429 6742 777827735 777827409 1.340000e-126 464.0
25 TraesCS4D01G108000 chr2B 90.942 276 17 5 1734 2008 256709950 256710218 1.400000e-96 364.0
26 TraesCS4D01G108000 chr2B 98.333 60 1 0 6749 6808 777827331 777827272 9.340000e-19 106.0
27 TraesCS4D01G108000 chr2B 95.000 60 3 0 6749 6808 777827171 777827112 2.020000e-15 95.3
28 TraesCS4D01G108000 chr2B 96.970 33 1 0 360 392 449081655 449081623 1.000000e-03 56.5
29 TraesCS4D01G108000 chrUn 91.395 337 16 3 6418 6742 84378431 84378096 3.740000e-122 449.0
30 TraesCS4D01G108000 chrUn 100.000 60 0 0 6749 6808 84377783 84377724 2.010000e-20 111.0
31 TraesCS4D01G108000 chrUn 96.667 60 2 0 6749 6808 84378018 84377959 4.340000e-17 100.0
32 TraesCS4D01G108000 chr7B 91.395 337 16 3 6418 6742 14200980 14201315 3.740000e-122 449.0
33 TraesCS4D01G108000 chr7B 97.738 221 4 1 1757 1976 648055675 648055895 4.980000e-101 379.0
34 TraesCS4D01G108000 chr7B 100.000 60 0 0 6749 6808 14201628 14201687 2.010000e-20 111.0
35 TraesCS4D01G108000 chr7B 96.667 60 2 0 6749 6808 14201393 14201452 4.340000e-17 100.0
36 TraesCS4D01G108000 chr6D 96.476 227 6 2 1757 1981 35627100 35626874 2.320000e-99 374.0
37 TraesCS4D01G108000 chr6D 97.285 221 5 1 1757 1976 469559050 469559270 2.320000e-99 374.0
38 TraesCS4D01G108000 chr6D 97.260 219 5 1 1757 1974 329497174 329496956 3.000000e-98 370.0
39 TraesCS4D01G108000 chr3A 96.875 224 6 1 1757 1979 207980086 207980309 2.320000e-99 374.0
40 TraesCS4D01G108000 chr3A 94.118 51 3 0 1711 1761 50783413 50783363 2.040000e-10 78.7
41 TraesCS4D01G108000 chr2D 97.273 220 5 1 1757 1975 163609284 163609503 8.340000e-99 372.0
42 TraesCS4D01G108000 chr2D 81.900 221 33 6 6429 6644 441543970 441544188 5.420000e-41 180.0
43 TraesCS4D01G108000 chr2D 90.000 60 2 2 1973 2032 260370035 260369980 2.630000e-09 75.0
44 TraesCS4D01G108000 chr2D 96.970 33 1 0 360 392 571443320 571443288 1.000000e-03 56.5
45 TraesCS4D01G108000 chr2A 96.018 226 7 2 1751 1974 141901253 141901028 3.880000e-97 366.0
46 TraesCS4D01G108000 chr7A 85.460 337 25 8 6429 6742 633117617 633117282 5.090000e-86 329.0
47 TraesCS4D01G108000 chr7A 87.611 226 16 2 6429 6642 633112400 633112625 1.130000e-62 252.0
48 TraesCS4D01G108000 chr6A 84.866 337 28 6 6429 6742 270267792 270268128 1.100000e-82 318.0
49 TraesCS4D01G108000 chr3D 96.947 131 4 0 6429 6559 586939164 586939034 3.200000e-53 220.0
50 TraesCS4D01G108000 chr3D 95.833 48 2 0 1967 2014 609921409 609921456 2.040000e-10 78.7
51 TraesCS4D01G108000 chr3D 88.710 62 7 0 1701 1762 481917023 481917084 7.320000e-10 76.8
52 TraesCS4D01G108000 chr3D 94.000 50 1 1 1973 2022 131009484 131009531 2.630000e-09 75.0
53 TraesCS4D01G108000 chr3D 85.075 67 7 3 1676 1741 934690 934754 1.580000e-06 65.8
54 TraesCS4D01G108000 chr3B 90.476 63 6 0 1700 1762 523562021 523562083 4.380000e-12 84.2
55 TraesCS4D01G108000 chr3B 92.593 54 4 0 1709 1762 160368593 160368646 2.040000e-10 78.7
56 TraesCS4D01G108000 chr6B 94.231 52 1 1 1973 2024 714093197 714093246 2.040000e-10 78.7
57 TraesCS4D01G108000 chr6B 86.765 68 1 1 1699 1758 697809599 697809666 1.230000e-07 69.4
58 TraesCS4D01G108000 chr7D 96.970 33 1 0 360 392 175659466 175659434 1.000000e-03 56.5
59 TraesCS4D01G108000 chr5B 94.444 36 2 0 360 395 710968344 710968309 1.000000e-03 56.5
60 TraesCS4D01G108000 chr1A 96.970 33 1 0 360 392 6159392 6159360 1.000000e-03 56.5
61 TraesCS4D01G108000 chr1A 96.970 33 1 0 360 392 13583887 13583855 1.000000e-03 56.5
62 TraesCS4D01G108000 chr1A 96.970 33 1 0 360 392 63034613 63034581 1.000000e-03 56.5
63 TraesCS4D01G108000 chr1A 96.970 33 1 0 360 392 432011799 432011767 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G108000 chr4D 87542279 87549086 6807 False 12573.000000 12573 100.000000 1 6808 1 chr4D.!!$F1 6807
1 TraesCS4D01G108000 chr4D 85994116 85999868 5752 False 2715.666667 6368 92.036667 1 6298 3 chr4D.!!$F2 6297
2 TraesCS4D01G108000 chr4A 500139212 500145280 6068 False 4511.000000 6403 93.829000 11 6298 2 chr4A.!!$F1 6287
3 TraesCS4D01G108000 chr4B 123497534 123503503 5969 False 1984.750000 5984 92.715500 1 6298 4 chr4B.!!$F2 6297
4 TraesCS4D01G108000 chr4B 578032133 578033074 941 True 1397.000000 1397 93.651000 2483 3413 1 chr4B.!!$R3 930
5 TraesCS4D01G108000 chr2B 777827112 777827735 623 True 221.766667 464 95.433000 6429 6808 3 chr2B.!!$R2 379
6 TraesCS4D01G108000 chrUn 84377724 84378431 707 True 220.000000 449 96.020667 6418 6808 3 chrUn.!!$R1 390
7 TraesCS4D01G108000 chr7B 14200980 14201687 707 False 220.000000 449 96.020667 6418 6808 3 chr7B.!!$F2 390

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
833 1044 0.976641 TCTGGAGGTGCAAATCGTCT 59.023 50.0 0.00 0.0 0.00 4.18 F
1787 2026 0.729116 CTCAGTTTACAGGGCATGCG 59.271 55.0 12.44 0.0 0.00 4.73 F
1952 2191 0.102481 AGGTATACGCGCAGGACTTG 59.898 55.0 5.73 0.0 0.00 3.16 F
1959 2198 0.163788 CGCGCAGGACTTGTAAACTG 59.836 55.0 8.75 0.0 0.00 3.16 F
1960 2199 1.508632 GCGCAGGACTTGTAAACTGA 58.491 50.0 0.30 0.0 32.86 3.41 F
3700 4017 1.016653 GCTCGCACTGGAAAGAGACC 61.017 60.0 0.00 0.0 32.84 3.85 F
4763 5080 0.099436 GTGGCGCAAATAGAGGCTTG 59.901 55.0 10.83 0.0 43.12 4.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1933 2172 0.102481 CAAGTCCTGCGCGTATACCT 59.898 55.000 8.43 0.00 0.00 3.08 R
3089 3357 0.315886 TTTGCATGCTGCTTCACCAG 59.684 50.000 20.33 0.00 45.31 4.00 R
3684 4001 0.318441 TCAGGTCTCTTTCCAGTGCG 59.682 55.000 0.00 0.00 0.00 5.34 R
3700 4017 0.887836 TCTGCTGCTTGGTTGCTCAG 60.888 55.000 0.00 0.00 36.43 3.35 R
3789 4106 2.028112 AGTTCTATGTGTCACATGGCGT 60.028 45.455 25.63 9.68 39.53 5.68 R
4887 5204 0.035056 ATTCCCTCTCCTTTGCCACG 60.035 55.000 0.00 0.00 0.00 4.94 R
6265 6599 1.149174 ATGCCCATCACCCATCGAC 59.851 57.895 0.00 0.00 0.00 4.20 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
136 141 6.071672 CGAGCAGATTCTCTATGGGATTTAGA 60.072 42.308 0.00 0.00 0.00 2.10
137 142 7.003402 AGCAGATTCTCTATGGGATTTAGAC 57.997 40.000 0.00 0.00 0.00 2.59
138 143 6.786959 AGCAGATTCTCTATGGGATTTAGACT 59.213 38.462 0.00 0.00 0.00 3.24
139 144 7.952930 AGCAGATTCTCTATGGGATTTAGACTA 59.047 37.037 0.00 0.00 0.00 2.59
141 146 8.748412 CAGATTCTCTATGGGATTTAGACTAGG 58.252 40.741 0.00 0.00 0.00 3.02
210 220 5.700832 GGATTTGGTTTCTTGGTTGGATTTC 59.299 40.000 0.00 0.00 0.00 2.17
224 419 6.150474 TGGTTGGATTTCGAGGTAAAATCTTC 59.850 38.462 6.71 0.05 41.04 2.87
227 422 3.984018 TTTCGAGGTAAAATCTTCGCG 57.016 42.857 0.00 0.00 36.97 5.87
259 454 2.070783 GTTTTCGGTTGATGCGAGGTA 58.929 47.619 0.00 0.00 0.00 3.08
260 455 1.717194 TTTCGGTTGATGCGAGGTAC 58.283 50.000 0.00 0.00 0.00 3.34
269 464 5.221382 GGTTGATGCGAGGTACTAGGATTTA 60.221 44.000 0.00 0.00 42.60 1.40
272 467 3.907221 TGCGAGGTACTAGGATTTAGGT 58.093 45.455 0.00 0.00 41.55 3.08
279 474 8.253113 CGAGGTACTAGGATTTAGGTGTTTTAA 58.747 37.037 0.00 0.00 41.55 1.52
387 589 3.847671 GGGGTGATCCTCCTTTTCTAG 57.152 52.381 4.44 0.00 35.33 2.43
406 608 9.462606 TTTTCTAGAAAAGGATTTGGAGGATAC 57.537 33.333 23.65 0.00 39.02 2.24
462 664 4.493547 CCTGTGACATCTCTCAGTTTCTC 58.506 47.826 0.00 0.00 36.62 2.87
514 716 8.789881 TTCGTATCTTGTTAACAATTTGTTGG 57.210 30.769 20.83 8.14 41.30 3.77
551 753 1.268539 GCAGTTGAAAGTCGGGTGTTG 60.269 52.381 0.00 0.00 0.00 3.33
681 892 3.335579 CAAGGAGGTGTGTACTAAAGGC 58.664 50.000 0.00 0.00 0.00 4.35
687 898 4.736473 AGGTGTGTACTAAAGGCCATTTT 58.264 39.130 5.01 0.00 32.01 1.82
766 977 2.430248 AAACCAAGGGAACGACTGTT 57.570 45.000 0.00 0.00 42.23 3.16
810 1021 2.301346 GTGAGATGGATTGCCGGAATT 58.699 47.619 5.05 0.00 36.79 2.17
822 1033 1.517832 CGGAATTCGCTCTGGAGGT 59.482 57.895 0.00 0.00 0.00 3.85
833 1044 0.976641 TCTGGAGGTGCAAATCGTCT 59.023 50.000 0.00 0.00 0.00 4.18
1120 1332 6.377996 TGTTACTATTGGCATCTCAAGCAATT 59.622 34.615 0.00 0.00 0.00 2.32
1342 1557 3.895656 AGTAGCTGGACTGTGTTTGAGTA 59.104 43.478 0.00 0.00 0.00 2.59
1343 1558 3.393089 AGCTGGACTGTGTTTGAGTAG 57.607 47.619 0.00 0.00 0.00 2.57
1344 1559 1.801178 GCTGGACTGTGTTTGAGTAGC 59.199 52.381 0.00 0.00 0.00 3.58
1370 1609 5.858581 GCAATGTATTTGTCTTCTGAACCAC 59.141 40.000 0.00 0.00 37.65 4.16
1381 1620 4.341806 TCTTCTGAACCACGGTTACACTAA 59.658 41.667 0.34 0.00 38.60 2.24
1389 1628 4.637091 ACCACGGTTACACTAATAAATGGC 59.363 41.667 0.00 0.00 0.00 4.40
1507 1746 8.389779 TCAATACTTGTCTTAGTTTTGCATGA 57.610 30.769 0.00 0.00 37.15 3.07
1630 1869 7.609097 TCAATGATTACTATCTGCTTCCTCT 57.391 36.000 0.00 0.00 0.00 3.69
1722 1961 3.081804 ACTTGCTCCGTCCCAAAATAAG 58.918 45.455 0.00 0.00 0.00 1.73
1724 1963 2.432444 TGCTCCGTCCCAAAATAAGTG 58.568 47.619 0.00 0.00 0.00 3.16
1725 1964 2.224670 TGCTCCGTCCCAAAATAAGTGT 60.225 45.455 0.00 0.00 0.00 3.55
1726 1965 2.418976 GCTCCGTCCCAAAATAAGTGTC 59.581 50.000 0.00 0.00 0.00 3.67
1728 1967 4.324267 CTCCGTCCCAAAATAAGTGTCTT 58.676 43.478 0.00 0.00 0.00 3.01
1729 1968 5.484715 CTCCGTCCCAAAATAAGTGTCTTA 58.515 41.667 0.00 0.00 0.00 2.10
1730 1969 5.867330 TCCGTCCCAAAATAAGTGTCTTAA 58.133 37.500 0.00 0.00 0.00 1.85
1731 1970 5.935789 TCCGTCCCAAAATAAGTGTCTTAAG 59.064 40.000 0.00 0.00 0.00 1.85
1732 1971 5.935789 CCGTCCCAAAATAAGTGTCTTAAGA 59.064 40.000 0.00 0.00 0.00 2.10
1733 1972 6.598064 CCGTCCCAAAATAAGTGTCTTAAGAT 59.402 38.462 8.75 0.00 0.00 2.40
1734 1973 7.120726 CCGTCCCAAAATAAGTGTCTTAAGATT 59.879 37.037 8.75 1.70 0.00 2.40
1735 1974 9.158233 CGTCCCAAAATAAGTGTCTTAAGATTA 57.842 33.333 8.75 4.05 0.00 1.75
1771 2010 9.970553 TGTATTAAAGTTACTACCTCTCTCTCA 57.029 33.333 0.00 0.00 0.00 3.27
1774 2013 8.937207 TTAAAGTTACTACCTCTCTCTCAGTT 57.063 34.615 0.00 0.00 0.00 3.16
1775 2014 7.842887 AAAGTTACTACCTCTCTCTCAGTTT 57.157 36.000 0.00 0.00 0.00 2.66
1776 2015 8.937207 AAAGTTACTACCTCTCTCTCAGTTTA 57.063 34.615 0.00 0.00 0.00 2.01
1777 2016 7.926674 AGTTACTACCTCTCTCTCAGTTTAC 57.073 40.000 0.00 0.00 0.00 2.01
1778 2017 7.460071 AGTTACTACCTCTCTCTCAGTTTACA 58.540 38.462 0.00 0.00 0.00 2.41
1779 2018 7.608761 AGTTACTACCTCTCTCTCAGTTTACAG 59.391 40.741 0.00 0.00 0.00 2.74
1780 2019 5.258051 ACTACCTCTCTCTCAGTTTACAGG 58.742 45.833 0.00 0.00 0.00 4.00
1781 2020 3.436243 ACCTCTCTCTCAGTTTACAGGG 58.564 50.000 0.00 0.00 0.00 4.45
1782 2021 2.167487 CCTCTCTCTCAGTTTACAGGGC 59.833 54.545 0.00 0.00 0.00 5.19
1783 2022 2.828520 CTCTCTCTCAGTTTACAGGGCA 59.171 50.000 0.00 0.00 0.00 5.36
1784 2023 3.445008 TCTCTCTCAGTTTACAGGGCAT 58.555 45.455 0.00 0.00 0.00 4.40
1785 2024 3.196469 TCTCTCTCAGTTTACAGGGCATG 59.804 47.826 0.00 0.00 0.00 4.06
1786 2025 2.012673 CTCTCAGTTTACAGGGCATGC 58.987 52.381 9.90 9.90 0.00 4.06
1787 2026 0.729116 CTCAGTTTACAGGGCATGCG 59.271 55.000 12.44 0.00 0.00 4.73
1788 2027 1.137404 CAGTTTACAGGGCATGCGC 59.863 57.895 26.04 26.04 37.44 6.09
1789 2028 2.100216 GTTTACAGGGCATGCGCG 59.900 61.111 26.71 22.63 39.92 6.86
1790 2029 2.359354 TTTACAGGGCATGCGCGT 60.359 55.556 26.71 26.25 39.92 6.01
1791 2030 1.079057 TTTACAGGGCATGCGCGTA 60.079 52.632 26.71 25.35 39.92 4.42
1792 2031 1.087202 TTTACAGGGCATGCGCGTAG 61.087 55.000 26.71 21.98 39.92 3.51
1805 2044 4.230603 CGTAGCCCTAGGTCGTCA 57.769 61.111 8.29 0.00 0.00 4.35
1806 2045 2.485677 CGTAGCCCTAGGTCGTCAA 58.514 57.895 8.29 0.00 0.00 3.18
1807 2046 1.030457 CGTAGCCCTAGGTCGTCAAT 58.970 55.000 8.29 0.00 0.00 2.57
1808 2047 1.407979 CGTAGCCCTAGGTCGTCAATT 59.592 52.381 8.29 0.00 0.00 2.32
1809 2048 2.159142 CGTAGCCCTAGGTCGTCAATTT 60.159 50.000 8.29 0.00 0.00 1.82
1810 2049 2.403252 AGCCCTAGGTCGTCAATTTG 57.597 50.000 8.29 0.00 0.00 2.32
1811 2050 1.906574 AGCCCTAGGTCGTCAATTTGA 59.093 47.619 8.29 0.00 0.00 2.69
1812 2051 2.007608 GCCCTAGGTCGTCAATTTGAC 58.992 52.381 17.76 17.76 43.65 3.18
1821 2060 5.622770 GTCGTCAATTTGACCAACCTAAT 57.377 39.130 20.87 0.00 44.20 1.73
1822 2061 6.730960 GTCGTCAATTTGACCAACCTAATA 57.269 37.500 20.87 0.00 44.20 0.98
1823 2062 6.540205 GTCGTCAATTTGACCAACCTAATAC 58.460 40.000 20.87 5.03 44.20 1.89
1824 2063 6.148150 GTCGTCAATTTGACCAACCTAATACA 59.852 38.462 20.87 0.00 44.20 2.29
1825 2064 6.711194 TCGTCAATTTGACCAACCTAATACAA 59.289 34.615 20.87 0.00 44.20 2.41
1826 2065 7.392113 TCGTCAATTTGACCAACCTAATACAAT 59.608 33.333 20.87 0.00 44.20 2.71
1827 2066 7.696453 CGTCAATTTGACCAACCTAATACAATC 59.304 37.037 20.87 0.00 44.20 2.67
1828 2067 8.519526 GTCAATTTGACCAACCTAATACAATCA 58.480 33.333 17.07 0.00 41.37 2.57
1829 2068 9.253832 TCAATTTGACCAACCTAATACAATCAT 57.746 29.630 0.00 0.00 0.00 2.45
1865 2104 9.457436 AAAATATACCAACATAAACTTCGGAGT 57.543 29.630 0.00 0.00 37.87 3.85
1879 2118 7.619964 AACTTCGGAGTTTCTACTTTCAAAA 57.380 32.000 2.29 0.00 43.48 2.44
1880 2119 7.247929 ACTTCGGAGTTTCTACTTTCAAAAG 57.752 36.000 0.00 0.97 35.92 2.27
1881 2120 7.046033 ACTTCGGAGTTTCTACTTTCAAAAGA 58.954 34.615 9.39 0.00 34.40 2.52
1882 2121 7.715686 ACTTCGGAGTTTCTACTTTCAAAAGAT 59.284 33.333 9.39 0.00 34.40 2.40
1883 2122 9.204570 CTTCGGAGTTTCTACTTTCAAAAGATA 57.795 33.333 9.39 0.00 39.31 1.98
1884 2123 9.720769 TTCGGAGTTTCTACTTTCAAAAGATAT 57.279 29.630 9.39 0.00 39.31 1.63
1935 2174 6.187682 AGGGTGATAAAATTGACAACCTAGG 58.812 40.000 7.41 7.41 46.75 3.02
1936 2175 5.949952 GGGTGATAAAATTGACAACCTAGGT 59.050 40.000 9.21 9.21 37.18 3.08
1937 2176 7.037153 AGGGTGATAAAATTGACAACCTAGGTA 60.037 37.037 16.67 0.00 46.75 3.08
1938 2177 7.778382 GGGTGATAAAATTGACAACCTAGGTAT 59.222 37.037 16.67 6.57 37.18 2.73
1939 2178 9.841295 GGTGATAAAATTGACAACCTAGGTATA 57.159 33.333 16.67 0.00 0.00 1.47
1941 2180 9.537192 TGATAAAATTGACAACCTAGGTATACG 57.463 33.333 16.67 6.92 0.00 3.06
1942 2181 6.673154 AAAATTGACAACCTAGGTATACGC 57.327 37.500 16.67 4.11 0.00 4.42
1943 2182 3.425577 TTGACAACCTAGGTATACGCG 57.574 47.619 16.67 3.53 0.00 6.01
1944 2183 1.066002 TGACAACCTAGGTATACGCGC 59.934 52.381 16.67 0.00 0.00 6.86
1945 2184 1.066002 GACAACCTAGGTATACGCGCA 59.934 52.381 16.67 0.00 0.00 6.09
1946 2185 1.066605 ACAACCTAGGTATACGCGCAG 59.933 52.381 16.67 2.42 0.00 5.18
1947 2186 0.672342 AACCTAGGTATACGCGCAGG 59.328 55.000 16.67 6.39 0.00 4.85
1948 2187 0.179009 ACCTAGGTATACGCGCAGGA 60.179 55.000 14.41 0.00 0.00 3.86
1949 2188 0.240411 CCTAGGTATACGCGCAGGAC 59.760 60.000 5.73 0.00 0.00 3.85
1950 2189 1.236628 CTAGGTATACGCGCAGGACT 58.763 55.000 5.73 1.68 0.00 3.85
1951 2190 1.607628 CTAGGTATACGCGCAGGACTT 59.392 52.381 5.73 0.00 0.00 3.01
1952 2191 0.102481 AGGTATACGCGCAGGACTTG 59.898 55.000 5.73 0.00 0.00 3.16
1953 2192 0.179119 GGTATACGCGCAGGACTTGT 60.179 55.000 5.73 0.00 0.00 3.16
1954 2193 1.066002 GGTATACGCGCAGGACTTGTA 59.934 52.381 5.73 0.00 0.00 2.41
1955 2194 2.480073 GGTATACGCGCAGGACTTGTAA 60.480 50.000 5.73 0.00 0.00 2.41
1956 2195 2.373540 ATACGCGCAGGACTTGTAAA 57.626 45.000 5.73 0.00 0.00 2.01
1957 2196 1.421382 TACGCGCAGGACTTGTAAAC 58.579 50.000 5.73 0.00 0.00 2.01
1958 2197 0.249741 ACGCGCAGGACTTGTAAACT 60.250 50.000 5.73 0.00 0.00 2.66
1959 2198 0.163788 CGCGCAGGACTTGTAAACTG 59.836 55.000 8.75 0.00 0.00 3.16
1960 2199 1.508632 GCGCAGGACTTGTAAACTGA 58.491 50.000 0.30 0.00 32.86 3.41
1961 2200 1.871039 GCGCAGGACTTGTAAACTGAA 59.129 47.619 0.30 0.00 32.86 3.02
1962 2201 2.289547 GCGCAGGACTTGTAAACTGAAA 59.710 45.455 0.30 0.00 32.86 2.69
1963 2202 3.848554 GCGCAGGACTTGTAAACTGAAAC 60.849 47.826 0.30 0.00 32.86 2.78
1964 2203 3.603857 CGCAGGACTTGTAAACTGAAACG 60.604 47.826 0.00 0.00 32.86 3.60
1965 2204 3.303791 GCAGGACTTGTAAACTGAAACGG 60.304 47.826 0.00 0.00 32.86 4.44
1966 2205 4.124238 CAGGACTTGTAAACTGAAACGGA 58.876 43.478 0.00 0.00 32.86 4.69
1967 2206 4.211374 CAGGACTTGTAAACTGAAACGGAG 59.789 45.833 0.00 0.00 32.86 4.63
1968 2207 3.497262 GGACTTGTAAACTGAAACGGAGG 59.503 47.826 0.00 0.00 0.00 4.30
1969 2208 4.124970 GACTTGTAAACTGAAACGGAGGT 58.875 43.478 0.00 0.00 0.00 3.85
1970 2209 5.280654 ACTTGTAAACTGAAACGGAGGTA 57.719 39.130 0.00 0.00 0.00 3.08
1971 2210 5.295152 ACTTGTAAACTGAAACGGAGGTAG 58.705 41.667 0.00 0.00 0.00 3.18
1972 2211 4.942761 TGTAAACTGAAACGGAGGTAGT 57.057 40.909 0.00 0.00 0.00 2.73
1973 2212 6.040842 ACTTGTAAACTGAAACGGAGGTAGTA 59.959 38.462 0.00 0.00 0.00 1.82
1974 2213 6.017400 TGTAAACTGAAACGGAGGTAGTAG 57.983 41.667 0.00 0.00 0.00 2.57
1975 2214 5.536161 TGTAAACTGAAACGGAGGTAGTAGT 59.464 40.000 0.00 0.00 0.00 2.73
1976 2215 6.714810 TGTAAACTGAAACGGAGGTAGTAGTA 59.285 38.462 0.00 0.00 0.00 1.82
1977 2216 6.847421 AAACTGAAACGGAGGTAGTAGTAT 57.153 37.500 0.00 0.00 0.00 2.12
1978 2217 7.944729 AAACTGAAACGGAGGTAGTAGTATA 57.055 36.000 0.00 0.00 0.00 1.47
1979 2218 7.944729 AACTGAAACGGAGGTAGTAGTATAA 57.055 36.000 0.00 0.00 0.00 0.98
1980 2219 7.944729 ACTGAAACGGAGGTAGTAGTATAAA 57.055 36.000 0.00 0.00 0.00 1.40
1981 2220 7.994194 ACTGAAACGGAGGTAGTAGTATAAAG 58.006 38.462 0.00 0.00 0.00 1.85
1982 2221 7.613411 ACTGAAACGGAGGTAGTAGTATAAAGT 59.387 37.037 0.00 0.00 0.00 2.66
1983 2222 7.765307 TGAAACGGAGGTAGTAGTATAAAGTG 58.235 38.462 0.00 0.00 0.00 3.16
1984 2223 6.705863 AACGGAGGTAGTAGTATAAAGTGG 57.294 41.667 0.00 0.00 0.00 4.00
1985 2224 6.006275 ACGGAGGTAGTAGTATAAAGTGGA 57.994 41.667 0.00 0.00 0.00 4.02
1986 2225 6.060788 ACGGAGGTAGTAGTATAAAGTGGAG 58.939 44.000 0.00 0.00 0.00 3.86
1987 2226 6.126652 ACGGAGGTAGTAGTATAAAGTGGAGA 60.127 42.308 0.00 0.00 0.00 3.71
1988 2227 6.204495 CGGAGGTAGTAGTATAAAGTGGAGAC 59.796 46.154 0.00 0.00 0.00 3.36
1989 2228 7.059156 GGAGGTAGTAGTATAAAGTGGAGACA 58.941 42.308 0.00 0.00 38.70 3.41
2009 2248 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
2065 2306 4.464008 TGATGAAGAGATTAATGTGGGCC 58.536 43.478 0.00 0.00 0.00 5.80
2073 2314 4.530875 AGATTAATGTGGGCCAAAGAGAG 58.469 43.478 8.40 0.00 0.00 3.20
2077 2318 2.978156 TGTGGGCCAAAGAGAGAAAT 57.022 45.000 8.40 0.00 0.00 2.17
2401 2658 6.016610 ACCAAAGTTGTGTTACGCTTGAATAT 60.017 34.615 0.00 0.00 0.00 1.28
2413 2670 4.943705 ACGCTTGAATATTGAGGTCACAAT 59.056 37.500 0.00 0.00 42.17 2.71
2414 2671 5.415701 ACGCTTGAATATTGAGGTCACAATT 59.584 36.000 0.00 0.00 40.36 2.32
2545 2805 6.336842 AGCTGAATGTGTAGAATTTGCTTT 57.663 33.333 0.00 0.00 0.00 3.51
2646 2909 8.429641 TGGTTTAGAAGATTACTATTGCCTAGG 58.570 37.037 3.67 3.67 0.00 3.02
2693 2956 2.172293 GAGCTGGGAGGAATGACTCATT 59.828 50.000 3.80 3.80 39.27 2.57
2779 3045 5.919196 CAAATGCTTTGCAGAAAACATACC 58.081 37.500 0.00 0.00 43.65 2.73
2896 3164 3.320673 AGAGACGATGAAACCCAAGAC 57.679 47.619 0.00 0.00 0.00 3.01
2969 3237 2.425143 TGATTCTTCCCCACAGCATC 57.575 50.000 0.00 0.00 0.00 3.91
3032 3300 2.225963 GCTGATATGCAGGATTCTGTGC 59.774 50.000 2.16 5.03 45.03 4.57
3073 3341 5.157940 TCTCTGCTGCTCTTTTGACTATT 57.842 39.130 0.00 0.00 0.00 1.73
3089 3357 6.466885 TGACTATTAGTGCTAAAGAGGACC 57.533 41.667 0.00 0.00 44.78 4.46
3257 3540 8.780846 AGATGATTTTTATTTTTGCATGCTCA 57.219 26.923 20.33 9.68 0.00 4.26
3631 3948 5.552870 ACTTCAGGTAGCAGAGAAAGAAA 57.447 39.130 0.00 0.00 0.00 2.52
3648 3965 6.947158 AGAAAGAAAGCAAGGATCTCAAGATT 59.053 34.615 0.00 0.00 34.37 2.40
3684 4001 4.012374 TGTCCAAGGAATTGAAGATGCTC 58.988 43.478 0.00 0.00 0.00 4.26
3700 4017 1.016653 GCTCGCACTGGAAAGAGACC 61.017 60.000 0.00 0.00 32.84 3.85
3803 4120 4.277239 GCTACGCCATGTGACACA 57.723 55.556 11.41 11.41 0.00 3.72
3810 4127 2.028112 ACGCCATGTGACACATAGAACT 60.028 45.455 20.42 0.00 36.53 3.01
3819 4136 5.246203 TGTGACACATAGAACTTCCTTAGCT 59.754 40.000 3.56 0.00 0.00 3.32
3956 4273 1.346068 GTGGGCCTCAGCTCTTATAGG 59.654 57.143 4.53 0.00 41.57 2.57
4129 4446 0.320683 TGATTCTGACCGTGCTGTGG 60.321 55.000 0.00 0.00 0.00 4.17
4291 4608 1.205655 GTGACACTCTCATGGCAGCTA 59.794 52.381 0.00 0.00 38.65 3.32
4346 4663 1.001378 CTTGGCAAACGAGTCCAAAGG 60.001 52.381 0.00 0.00 39.16 3.11
4393 4710 4.142049 GGTTAGATGGTGAGAGGAAGTCAG 60.142 50.000 0.00 0.00 0.00 3.51
4419 4736 4.560108 GCATTGCAGTTGGAATCAAAGTCT 60.560 41.667 3.15 0.00 33.70 3.24
4582 4899 5.075493 AGAAGATTGATGCAGTGAAAACCT 58.925 37.500 0.00 0.00 0.00 3.50
4594 4911 0.663153 GAAAACCTTGTCTGCGCAGT 59.337 50.000 34.70 14.68 0.00 4.40
4730 5047 2.893489 AGGTGCAAAAGGGAAAGATGTC 59.107 45.455 0.00 0.00 0.00 3.06
4741 5058 4.349342 AGGGAAAGATGTCTCACAAAGAGT 59.651 41.667 0.00 0.00 44.98 3.24
4762 5079 0.322456 TGTGGCGCAAATAGAGGCTT 60.322 50.000 10.83 0.00 43.12 4.35
4763 5080 0.099436 GTGGCGCAAATAGAGGCTTG 59.901 55.000 10.83 0.00 43.12 4.01
4786 5103 5.167845 GGAAGACTGAATCAGAGAGAACAC 58.832 45.833 18.20 0.36 35.18 3.32
4812 5129 1.064060 GTGGAATCCGCCAAAGAATCG 59.936 52.381 0.36 0.00 40.20 3.34
4813 5130 1.339631 TGGAATCCGCCAAAGAATCGT 60.340 47.619 0.00 0.00 34.31 3.73
4815 5132 2.477863 GGAATCCGCCAAAGAATCGTTG 60.478 50.000 1.92 1.92 0.00 4.10
4854 5171 4.305989 AGCAAACTCAGAAATCGCAAAA 57.694 36.364 0.00 0.00 0.00 2.44
4855 5172 4.874970 AGCAAACTCAGAAATCGCAAAAT 58.125 34.783 0.00 0.00 0.00 1.82
4887 5204 2.072298 GTGAATGCACTGGAGTCTGAC 58.928 52.381 0.00 0.00 41.84 3.51
4889 5206 0.681733 AATGCACTGGAGTCTGACGT 59.318 50.000 1.52 0.00 0.00 4.34
4914 5231 5.440610 GCAAAGGAGAGGGAATATTCTTCA 58.559 41.667 14.95 0.00 0.00 3.02
4917 5234 7.341805 CAAAGGAGAGGGAATATTCTTCAGAA 58.658 38.462 14.95 0.00 38.56 3.02
4930 5247 5.679734 TTCTTCAGAAGTCAAGATGCAAC 57.320 39.130 10.09 0.00 0.00 4.17
5370 5687 5.623596 GCCAAAATAACATGGGTGGTACTTC 60.624 44.000 0.00 0.00 37.19 3.01
5371 5688 5.478679 CCAAAATAACATGGGTGGTACTTCA 59.521 40.000 0.00 0.00 28.40 3.02
5372 5689 6.350110 CCAAAATAACATGGGTGGTACTTCAG 60.350 42.308 0.00 0.00 28.40 3.02
5373 5690 5.514500 AATAACATGGGTGGTACTTCAGT 57.486 39.130 0.00 0.00 28.40 3.41
5374 5691 6.630203 AATAACATGGGTGGTACTTCAGTA 57.370 37.500 0.00 0.00 28.40 2.74
5403 5720 2.255770 AGCCTAGGTTCTAAGCACCT 57.744 50.000 11.31 0.62 46.95 4.00
5446 5765 3.733337 TCACTCCTGAAACTTGAGAAGC 58.267 45.455 0.00 0.00 0.00 3.86
5461 5783 5.450818 TGAGAAGCCCCTGTATAACAATT 57.549 39.130 0.00 0.00 0.00 2.32
5498 5820 2.185608 GAGAAGGAGGTCGCCAGC 59.814 66.667 0.00 0.00 0.00 4.85
5579 5901 1.862806 GCTGACGAACCTTGACAGC 59.137 57.895 0.00 0.00 44.93 4.40
5684 6006 1.065928 GTACGGTCTGCATCTCCCG 59.934 63.158 10.72 10.72 45.72 5.14
5935 6261 0.881118 TTCGCTTGGATTTGTGCTCC 59.119 50.000 0.00 0.00 0.00 4.70
5980 6306 4.804139 GTCATTAGATGATCGGTGTTTCGT 59.196 41.667 0.00 0.00 42.04 3.85
5981 6307 5.041287 TCATTAGATGATCGGTGTTTCGTC 58.959 41.667 0.00 0.00 33.59 4.20
5993 6319 1.733912 TGTTTCGTCAGATGCAGATGC 59.266 47.619 0.00 0.00 42.50 3.91
6002 6329 3.058450 CAGATGCAGATGCTAGTAGTGC 58.942 50.000 6.35 10.06 42.66 4.40
6031 6358 5.564063 GCACTAAAATGTTACCCAGGACAAC 60.564 44.000 0.00 0.00 0.00 3.32
6032 6359 5.533154 CACTAAAATGTTACCCAGGACAACA 59.467 40.000 7.95 7.95 36.66 3.33
6033 6360 6.039941 CACTAAAATGTTACCCAGGACAACAA 59.960 38.462 9.23 0.00 35.91 2.83
6037 6366 3.698289 TGTTACCCAGGACAACAACAAA 58.302 40.909 3.90 0.00 0.00 2.83
6069 6398 1.408702 AGCAAAACTGCAATCACGGTT 59.591 42.857 0.00 0.00 40.90 4.44
6137 6466 4.868171 TGTAAAGTAGCACGATGGTCATTC 59.132 41.667 0.00 0.00 0.00 2.67
6143 6472 6.291377 AGTAGCACGATGGTCATTCATTAAT 58.709 36.000 0.00 0.00 0.00 1.40
6216 6545 4.809958 CAGATCACTTTGAGAGCTACATGG 59.190 45.833 0.00 0.00 29.34 3.66
6222 6551 3.827008 TTGAGAGCTACATGGTGGATC 57.173 47.619 0.00 0.00 29.78 3.36
6265 6599 2.159558 GGAAGCGCATGAGCATATGATG 60.160 50.000 23.73 2.65 42.27 3.07
6274 6608 2.634453 TGAGCATATGATGTCGATGGGT 59.366 45.455 6.97 0.00 0.00 4.51
6277 6611 3.262660 AGCATATGATGTCGATGGGTGAT 59.737 43.478 6.97 0.00 0.00 3.06
6298 6634 2.158623 TGGGCATGAGATACATTCCACC 60.159 50.000 0.00 0.00 42.58 4.61
6299 6635 2.107204 GGGCATGAGATACATTCCACCT 59.893 50.000 0.00 0.00 42.58 4.00
6300 6636 3.327757 GGGCATGAGATACATTCCACCTA 59.672 47.826 0.00 0.00 42.58 3.08
6301 6637 4.564406 GGGCATGAGATACATTCCACCTAG 60.564 50.000 0.00 0.00 42.58 3.02
6302 6638 4.564406 GGCATGAGATACATTCCACCTAGG 60.564 50.000 7.41 7.41 40.94 3.02
6303 6639 4.573900 CATGAGATACATTCCACCTAGGC 58.426 47.826 9.30 0.00 37.07 3.93
6304 6640 2.628178 TGAGATACATTCCACCTAGGCG 59.372 50.000 9.30 0.00 37.29 5.52
6305 6641 1.344763 AGATACATTCCACCTAGGCGC 59.655 52.381 9.30 0.00 37.29 6.53
6306 6642 0.396811 ATACATTCCACCTAGGCGCC 59.603 55.000 21.89 21.89 37.29 6.53
6307 6643 0.689745 TACATTCCACCTAGGCGCCT 60.690 55.000 34.85 34.85 37.29 5.52
6308 6644 1.227674 CATTCCACCTAGGCGCCTC 60.228 63.158 36.73 3.05 37.29 4.70
6309 6645 2.444256 ATTCCACCTAGGCGCCTCC 61.444 63.158 36.73 2.07 37.29 4.30
6311 6647 3.083997 CCACCTAGGCGCCTCCTT 61.084 66.667 36.73 15.68 44.75 3.36
6312 6648 1.760875 CCACCTAGGCGCCTCCTTA 60.761 63.158 36.73 15.48 44.75 2.69
6313 6649 1.122019 CCACCTAGGCGCCTCCTTAT 61.122 60.000 36.73 11.27 44.75 1.73
6314 6650 0.759346 CACCTAGGCGCCTCCTTATT 59.241 55.000 36.73 10.36 44.75 1.40
6315 6651 1.968493 CACCTAGGCGCCTCCTTATTA 59.032 52.381 36.73 13.24 44.75 0.98
6316 6652 2.567615 CACCTAGGCGCCTCCTTATTAT 59.432 50.000 36.73 8.54 44.75 1.28
6317 6653 2.567615 ACCTAGGCGCCTCCTTATTATG 59.432 50.000 36.73 13.22 44.75 1.90
6318 6654 2.567615 CCTAGGCGCCTCCTTATTATGT 59.432 50.000 36.73 6.99 44.75 2.29
6319 6655 3.008049 CCTAGGCGCCTCCTTATTATGTT 59.992 47.826 36.73 6.74 44.75 2.71
6320 6656 3.577805 AGGCGCCTCCTTATTATGTTT 57.422 42.857 27.08 0.00 44.75 2.83
6321 6657 3.898482 AGGCGCCTCCTTATTATGTTTT 58.102 40.909 27.08 0.00 44.75 2.43
6322 6658 4.278310 AGGCGCCTCCTTATTATGTTTTT 58.722 39.130 27.08 0.00 44.75 1.94
6346 6682 8.808240 TTTAGGGGTATCTCCTTATTATGTGT 57.192 34.615 0.00 0.00 35.92 3.72
6347 6683 8.808240 TTAGGGGTATCTCCTTATTATGTGTT 57.192 34.615 0.00 0.00 35.92 3.32
6348 6684 7.317722 AGGGGTATCTCCTTATTATGTGTTC 57.682 40.000 0.00 0.00 36.25 3.18
6349 6685 7.082972 AGGGGTATCTCCTTATTATGTGTTCT 58.917 38.462 0.00 0.00 36.25 3.01
6350 6686 7.235812 AGGGGTATCTCCTTATTATGTGTTCTC 59.764 40.741 0.00 0.00 36.25 2.87
6351 6687 7.016268 GGGGTATCTCCTTATTATGTGTTCTCA 59.984 40.741 0.00 0.00 36.25 3.27
6352 6688 8.429641 GGGTATCTCCTTATTATGTGTTCTCAA 58.570 37.037 0.00 0.00 36.25 3.02
6353 6689 9.262358 GGTATCTCCTTATTATGTGTTCTCAAC 57.738 37.037 0.00 0.00 0.00 3.18
6354 6690 9.262358 GTATCTCCTTATTATGTGTTCTCAACC 57.738 37.037 0.00 0.00 0.00 3.77
6355 6691 7.496346 TCTCCTTATTATGTGTTCTCAACCT 57.504 36.000 0.00 0.00 0.00 3.50
6356 6692 7.556844 TCTCCTTATTATGTGTTCTCAACCTC 58.443 38.462 0.00 0.00 0.00 3.85
6357 6693 6.650120 TCCTTATTATGTGTTCTCAACCTCC 58.350 40.000 0.00 0.00 0.00 4.30
6358 6694 6.443849 TCCTTATTATGTGTTCTCAACCTCCT 59.556 38.462 0.00 0.00 0.00 3.69
6359 6695 7.037586 TCCTTATTATGTGTTCTCAACCTCCTT 60.038 37.037 0.00 0.00 0.00 3.36
6360 6696 7.611855 CCTTATTATGTGTTCTCAACCTCCTTT 59.388 37.037 0.00 0.00 0.00 3.11
6361 6697 8.934023 TTATTATGTGTTCTCAACCTCCTTTT 57.066 30.769 0.00 0.00 0.00 2.27
6362 6698 6.633500 TTATGTGTTCTCAACCTCCTTTTG 57.367 37.500 0.00 0.00 0.00 2.44
6363 6699 3.963129 TGTGTTCTCAACCTCCTTTTGT 58.037 40.909 0.00 0.00 0.00 2.83
6364 6700 5.105567 TGTGTTCTCAACCTCCTTTTGTA 57.894 39.130 0.00 0.00 0.00 2.41
6365 6701 5.502079 TGTGTTCTCAACCTCCTTTTGTAA 58.498 37.500 0.00 0.00 0.00 2.41
6366 6702 5.946972 TGTGTTCTCAACCTCCTTTTGTAAA 59.053 36.000 0.00 0.00 0.00 2.01
6367 6703 6.434652 TGTGTTCTCAACCTCCTTTTGTAAAA 59.565 34.615 0.00 0.00 0.00 1.52
6368 6704 6.750501 GTGTTCTCAACCTCCTTTTGTAAAAC 59.249 38.462 0.00 0.00 0.00 2.43
6369 6705 5.744666 TCTCAACCTCCTTTTGTAAAACG 57.255 39.130 0.00 0.00 0.00 3.60
6370 6706 5.430007 TCTCAACCTCCTTTTGTAAAACGA 58.570 37.500 0.00 0.00 0.00 3.85
6371 6707 5.881443 TCTCAACCTCCTTTTGTAAAACGAA 59.119 36.000 0.00 0.00 0.00 3.85
6372 6708 6.374894 TCTCAACCTCCTTTTGTAAAACGAAA 59.625 34.615 0.00 0.00 31.18 3.46
6373 6709 6.324042 TCAACCTCCTTTTGTAAAACGAAAC 58.676 36.000 0.00 0.00 29.09 2.78
6374 6710 5.252969 ACCTCCTTTTGTAAAACGAAACC 57.747 39.130 0.00 0.00 29.09 3.27
6375 6711 4.951715 ACCTCCTTTTGTAAAACGAAACCT 59.048 37.500 0.00 0.00 29.09 3.50
6376 6712 6.121590 ACCTCCTTTTGTAAAACGAAACCTA 58.878 36.000 0.00 0.00 29.09 3.08
6377 6713 6.774170 ACCTCCTTTTGTAAAACGAAACCTAT 59.226 34.615 0.00 0.00 29.09 2.57
6378 6714 7.081976 CCTCCTTTTGTAAAACGAAACCTATG 58.918 38.462 0.00 0.00 29.09 2.23
6379 6715 7.040961 CCTCCTTTTGTAAAACGAAACCTATGA 60.041 37.037 0.00 0.00 29.09 2.15
6380 6716 8.398878 TCCTTTTGTAAAACGAAACCTATGAT 57.601 30.769 0.00 0.00 29.09 2.45
6381 6717 8.852135 TCCTTTTGTAAAACGAAACCTATGATT 58.148 29.630 0.00 0.00 29.09 2.57
6382 6718 9.124807 CCTTTTGTAAAACGAAACCTATGATTC 57.875 33.333 0.00 0.00 29.09 2.52
6383 6719 9.124807 CTTTTGTAAAACGAAACCTATGATTCC 57.875 33.333 0.00 0.00 29.09 3.01
6384 6720 7.989416 TTGTAAAACGAAACCTATGATTCCT 57.011 32.000 0.00 0.00 0.00 3.36
6385 6721 7.605410 TGTAAAACGAAACCTATGATTCCTC 57.395 36.000 0.00 0.00 0.00 3.71
6386 6722 7.391620 TGTAAAACGAAACCTATGATTCCTCT 58.608 34.615 0.00 0.00 0.00 3.69
6387 6723 6.743575 AAAACGAAACCTATGATTCCTCTG 57.256 37.500 0.00 0.00 0.00 3.35
6388 6724 5.677319 AACGAAACCTATGATTCCTCTGA 57.323 39.130 0.00 0.00 0.00 3.27
6389 6725 5.677319 ACGAAACCTATGATTCCTCTGAA 57.323 39.130 0.00 0.00 34.33 3.02
6390 6726 6.240549 ACGAAACCTATGATTCCTCTGAAT 57.759 37.500 0.00 0.00 43.91 2.57
6391 6727 6.051717 ACGAAACCTATGATTCCTCTGAATG 58.948 40.000 0.00 0.00 41.30 2.67
6392 6728 5.049818 CGAAACCTATGATTCCTCTGAATGC 60.050 44.000 0.00 0.00 41.30 3.56
6393 6729 5.378230 AACCTATGATTCCTCTGAATGCA 57.622 39.130 0.00 0.00 41.30 3.96
6394 6730 4.970711 ACCTATGATTCCTCTGAATGCAG 58.029 43.478 0.00 0.00 41.30 4.41
6395 6731 3.752222 CCTATGATTCCTCTGAATGCAGC 59.248 47.826 0.00 0.00 41.30 5.25
6396 6732 3.579534 ATGATTCCTCTGAATGCAGCT 57.420 42.857 0.00 0.00 41.30 4.24
6397 6733 4.701651 ATGATTCCTCTGAATGCAGCTA 57.298 40.909 0.00 0.00 41.30 3.32
6398 6734 4.492494 TGATTCCTCTGAATGCAGCTAA 57.508 40.909 0.00 0.00 41.30 3.09
6399 6735 4.847198 TGATTCCTCTGAATGCAGCTAAA 58.153 39.130 0.00 0.00 41.30 1.85
6400 6736 5.255687 TGATTCCTCTGAATGCAGCTAAAA 58.744 37.500 0.00 0.00 41.30 1.52
6401 6737 5.356190 TGATTCCTCTGAATGCAGCTAAAAG 59.644 40.000 0.00 0.00 41.30 2.27
6402 6738 4.292186 TCCTCTGAATGCAGCTAAAAGT 57.708 40.909 0.00 0.00 42.01 2.66
6403 6739 4.655963 TCCTCTGAATGCAGCTAAAAGTT 58.344 39.130 0.00 0.00 42.01 2.66
6404 6740 5.072741 TCCTCTGAATGCAGCTAAAAGTTT 58.927 37.500 0.00 0.00 42.01 2.66
6405 6741 6.237901 TCCTCTGAATGCAGCTAAAAGTTTA 58.762 36.000 0.00 0.00 42.01 2.01
6406 6742 6.149474 TCCTCTGAATGCAGCTAAAAGTTTAC 59.851 38.462 0.00 0.00 42.01 2.01
6407 6743 6.072508 CCTCTGAATGCAGCTAAAAGTTTACA 60.073 38.462 0.00 0.00 42.01 2.41
6408 6744 6.668323 TCTGAATGCAGCTAAAAGTTTACAC 58.332 36.000 0.00 0.00 42.01 2.90
6409 6745 6.262049 TCTGAATGCAGCTAAAAGTTTACACA 59.738 34.615 0.00 0.00 42.01 3.72
6410 6746 6.205784 TGAATGCAGCTAAAAGTTTACACAC 58.794 36.000 0.00 0.00 0.00 3.82
6411 6747 5.766150 ATGCAGCTAAAAGTTTACACACA 57.234 34.783 0.00 0.00 0.00 3.72
6412 6748 5.766150 TGCAGCTAAAAGTTTACACACAT 57.234 34.783 0.00 0.00 0.00 3.21
6413 6749 6.869315 TGCAGCTAAAAGTTTACACACATA 57.131 33.333 0.00 0.00 0.00 2.29
6414 6750 7.447374 TGCAGCTAAAAGTTTACACACATAT 57.553 32.000 0.00 0.00 0.00 1.78
6415 6751 7.881142 TGCAGCTAAAAGTTTACACACATATT 58.119 30.769 0.00 0.00 0.00 1.28
6416 6752 9.004717 TGCAGCTAAAAGTTTACACACATATTA 57.995 29.630 0.00 0.00 0.00 0.98
6417 6753 9.834628 GCAGCTAAAAGTTTACACACATATTAA 57.165 29.630 0.00 0.00 0.00 1.40
6463 6799 1.125711 AGCCCCACTAACTTGTCCGT 61.126 55.000 0.00 0.00 0.00 4.69
6495 6831 0.820871 TGACCCACCAACTTGCAAAC 59.179 50.000 0.00 0.00 0.00 2.93
6504 6840 1.331756 CAACTTGCAAACGCTCACTCT 59.668 47.619 0.00 0.00 0.00 3.24
6509 6845 1.580845 GCAAACGCTCACTCTGCCAT 61.581 55.000 0.00 0.00 0.00 4.40
6525 6861 1.777272 GCCATCCAGAAACTATCCCCT 59.223 52.381 0.00 0.00 0.00 4.79
6686 7035 5.622460 CGAGAGTGGCTGTACTAAGACAAAT 60.622 44.000 0.00 0.00 36.80 2.32
6695 7044 7.313646 GCTGTACTAAGACAAATCACTACTCA 58.686 38.462 0.00 0.00 0.00 3.41
6742 7091 1.003233 GAACAGCAGGTCCTGGGTC 60.003 63.158 20.72 9.09 37.16 4.46
6744 7093 2.608988 CAGCAGGTCCTGGGTCCT 60.609 66.667 20.72 5.98 34.11 3.85
6746 7095 3.721706 GCAGGTCCTGGGTCCTGG 61.722 72.222 27.15 16.04 46.49 4.45
6747 7096 3.011517 CAGGTCCTGGGTCCTGGG 61.012 72.222 22.27 3.72 44.05 4.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
136 141 0.683504 CCTCGCCCTACACACCTAGT 60.684 60.000 0.00 0.00 0.00 2.57
137 142 1.392710 CCCTCGCCCTACACACCTAG 61.393 65.000 0.00 0.00 0.00 3.02
138 143 1.380785 CCCTCGCCCTACACACCTA 60.381 63.158 0.00 0.00 0.00 3.08
139 144 2.683933 CCCTCGCCCTACACACCT 60.684 66.667 0.00 0.00 0.00 4.00
141 146 0.250597 AAAACCCTCGCCCTACACAC 60.251 55.000 0.00 0.00 0.00 3.82
210 220 1.587034 GACCGCGAAGATTTTACCTCG 59.413 52.381 8.23 0.00 0.00 4.63
224 419 0.036671 AAAACCCTAAGGAGACCGCG 60.037 55.000 0.00 0.00 36.73 6.46
227 422 1.627329 ACCGAAAACCCTAAGGAGACC 59.373 52.381 0.00 0.00 36.73 3.85
259 454 6.373495 CCGCTTTAAAACACCTAAATCCTAGT 59.627 38.462 0.00 0.00 0.00 2.57
260 455 6.596497 TCCGCTTTAAAACACCTAAATCCTAG 59.404 38.462 0.00 0.00 0.00 3.02
269 464 6.148976 GTCTAGAAATCCGCTTTAAAACACCT 59.851 38.462 0.00 0.00 0.00 4.00
272 467 7.227910 ACTTGTCTAGAAATCCGCTTTAAAACA 59.772 33.333 0.00 0.00 0.00 2.83
279 474 4.389077 CGAAACTTGTCTAGAAATCCGCTT 59.611 41.667 0.00 0.00 0.00 4.68
336 538 9.487790 CTCTCTTCATAGAAATCCAAATCCTAC 57.512 37.037 0.00 0.00 0.00 3.18
356 558 3.642741 ATCACCCCCGGCCTCTCTT 62.643 63.158 0.00 0.00 0.00 2.85
387 589 4.339530 GCCAGTATCCTCCAAATCCTTTTC 59.660 45.833 0.00 0.00 0.00 2.29
406 608 3.254166 ACTGCAGAAAACTACATTGCCAG 59.746 43.478 23.35 0.00 33.98 4.85
462 664 2.616960 TCAAACAATGAGTCGGATCCG 58.383 47.619 28.62 28.62 35.66 4.18
514 716 5.695816 TCAACTGCAAATACCAAATTCTTGC 59.304 36.000 0.00 0.00 42.12 4.01
551 753 2.526077 GCAACCCGCTTATAGCAAAAC 58.474 47.619 0.00 0.00 42.58 2.43
681 892 6.350629 ACAGAAAGGAATGGAGAAAAATGG 57.649 37.500 0.00 0.00 0.00 3.16
687 898 5.532406 CACTGAAACAGAAAGGAATGGAGAA 59.468 40.000 5.76 0.00 35.18 2.87
766 977 1.887854 CACCACACCATCAAAGCATCA 59.112 47.619 0.00 0.00 0.00 3.07
810 1021 0.391661 GATTTGCACCTCCAGAGCGA 60.392 55.000 0.00 0.00 0.00 4.93
822 1033 1.404717 GCTCCTCTCAGACGATTTGCA 60.405 52.381 0.00 0.00 0.00 4.08
833 1044 3.284251 TCCCCAGGGCTCCTCTCA 61.284 66.667 0.00 0.00 34.68 3.27
979 1191 6.676950 ACATGTTTCGCTGTATTTGAAATCA 58.323 32.000 0.00 0.00 34.47 2.57
1120 1332 2.104622 TGTCCAAGACAGCAGATGACAA 59.895 45.455 0.00 0.00 37.67 3.18
1163 1378 2.358898 CCACCAGAAACAGGTTGAAGTG 59.641 50.000 0.00 0.00 37.23 3.16
1342 1557 5.005740 TCAGAAGACAAATACATTGCAGCT 58.994 37.500 0.00 0.00 43.13 4.24
1343 1558 5.300969 TCAGAAGACAAATACATTGCAGC 57.699 39.130 0.00 0.00 43.13 5.25
1344 1559 6.088824 GGTTCAGAAGACAAATACATTGCAG 58.911 40.000 0.00 0.00 43.13 4.41
1370 1609 3.310227 TGCGCCATTTATTAGTGTAACCG 59.690 43.478 4.18 0.00 37.80 4.44
1381 1620 5.478679 ACTCTCTACTAGATGCGCCATTTAT 59.521 40.000 4.18 0.00 32.41 1.40
1389 1628 5.950758 ATTACCACTCTCTACTAGATGCG 57.049 43.478 0.00 0.00 32.41 4.73
1502 1741 7.976135 AATCTATCTCATACCAAACTCATGC 57.024 36.000 0.00 0.00 0.00 4.06
1705 1944 2.418976 GACACTTATTTTGGGACGGAGC 59.581 50.000 0.00 0.00 0.00 4.70
1745 1984 9.970553 TGAGAGAGAGGTAGTAACTTTAATACA 57.029 33.333 8.42 0.00 36.29 2.29
1748 1987 9.536510 AACTGAGAGAGAGGTAGTAACTTTAAT 57.463 33.333 0.00 0.00 0.00 1.40
1749 1988 8.937207 AACTGAGAGAGAGGTAGTAACTTTAA 57.063 34.615 0.00 0.00 0.00 1.52
1750 1989 8.937207 AAACTGAGAGAGAGGTAGTAACTTTA 57.063 34.615 0.00 0.00 0.00 1.85
1751 1990 7.842887 AAACTGAGAGAGAGGTAGTAACTTT 57.157 36.000 0.00 0.00 0.00 2.66
1752 1991 7.943447 TGTAAACTGAGAGAGAGGTAGTAACTT 59.057 37.037 0.00 0.00 0.00 2.66
1753 1992 7.460071 TGTAAACTGAGAGAGAGGTAGTAACT 58.540 38.462 0.00 0.00 0.00 2.24
1754 1993 7.148205 CCTGTAAACTGAGAGAGAGGTAGTAAC 60.148 44.444 0.00 0.00 0.00 2.50
1755 1994 6.885376 CCTGTAAACTGAGAGAGAGGTAGTAA 59.115 42.308 0.00 0.00 0.00 2.24
1756 1995 6.416415 CCTGTAAACTGAGAGAGAGGTAGTA 58.584 44.000 0.00 0.00 0.00 1.82
1757 1996 5.258051 CCTGTAAACTGAGAGAGAGGTAGT 58.742 45.833 0.00 0.00 0.00 2.73
1758 1997 4.642885 CCCTGTAAACTGAGAGAGAGGTAG 59.357 50.000 0.00 0.00 0.00 3.18
1759 1998 4.601084 CCCTGTAAACTGAGAGAGAGGTA 58.399 47.826 0.00 0.00 0.00 3.08
1760 1999 3.436243 CCCTGTAAACTGAGAGAGAGGT 58.564 50.000 0.00 0.00 0.00 3.85
1761 2000 2.167487 GCCCTGTAAACTGAGAGAGAGG 59.833 54.545 0.00 0.00 0.00 3.69
1762 2001 2.828520 TGCCCTGTAAACTGAGAGAGAG 59.171 50.000 0.00 0.00 0.00 3.20
1763 2002 2.889512 TGCCCTGTAAACTGAGAGAGA 58.110 47.619 0.00 0.00 0.00 3.10
1764 2003 3.529533 CATGCCCTGTAAACTGAGAGAG 58.470 50.000 0.00 0.00 0.00 3.20
1765 2004 2.355108 GCATGCCCTGTAAACTGAGAGA 60.355 50.000 6.36 0.00 0.00 3.10
1766 2005 2.012673 GCATGCCCTGTAAACTGAGAG 58.987 52.381 6.36 0.00 0.00 3.20
1767 2006 1.675714 CGCATGCCCTGTAAACTGAGA 60.676 52.381 13.15 0.00 0.00 3.27
1768 2007 0.729116 CGCATGCCCTGTAAACTGAG 59.271 55.000 13.15 0.00 0.00 3.35
1769 2008 1.305219 GCGCATGCCCTGTAAACTGA 61.305 55.000 13.15 0.00 33.98 3.41
1770 2009 1.137404 GCGCATGCCCTGTAAACTG 59.863 57.895 13.15 0.00 33.98 3.16
1771 2010 2.398554 CGCGCATGCCCTGTAAACT 61.399 57.895 13.15 0.00 38.08 2.66
1772 2011 1.363145 TACGCGCATGCCCTGTAAAC 61.363 55.000 13.15 0.00 38.08 2.01
1773 2012 1.079057 TACGCGCATGCCCTGTAAA 60.079 52.632 13.15 0.00 38.08 2.01
1774 2013 1.520564 CTACGCGCATGCCCTGTAA 60.521 57.895 13.15 0.00 38.08 2.41
1775 2014 2.106131 CTACGCGCATGCCCTGTA 59.894 61.111 13.15 11.19 38.08 2.74
1780 2019 4.602259 TAGGGCTACGCGCATGCC 62.602 66.667 23.56 23.56 44.06 4.40
1781 2020 3.038417 CTAGGGCTACGCGCATGC 61.038 66.667 5.73 7.91 44.06 4.06
1782 2021 2.356313 CCTAGGGCTACGCGCATG 60.356 66.667 5.73 0.00 44.06 4.06
1783 2022 2.838225 ACCTAGGGCTACGCGCAT 60.838 61.111 14.81 0.00 44.06 4.73
1784 2023 3.524606 GACCTAGGGCTACGCGCA 61.525 66.667 14.81 0.00 44.06 6.09
1785 2024 4.625781 CGACCTAGGGCTACGCGC 62.626 72.222 14.26 0.00 41.91 6.86
1786 2025 3.178569 GACGACCTAGGGCTACGCG 62.179 68.421 14.26 3.53 0.00 6.01
1787 2026 1.660560 TTGACGACCTAGGGCTACGC 61.661 60.000 14.26 9.43 0.00 4.42
1788 2027 1.030457 ATTGACGACCTAGGGCTACG 58.970 55.000 14.26 14.60 0.00 3.51
1789 2028 3.118884 TCAAATTGACGACCTAGGGCTAC 60.119 47.826 14.26 7.02 0.00 3.58
1790 2029 3.101437 TCAAATTGACGACCTAGGGCTA 58.899 45.455 14.26 0.00 0.00 3.93
1791 2030 1.906574 TCAAATTGACGACCTAGGGCT 59.093 47.619 14.26 0.00 0.00 5.19
1792 2031 2.007608 GTCAAATTGACGACCTAGGGC 58.992 52.381 14.81 9.80 37.67 5.19
1802 2041 8.519526 TGATTGTATTAGGTTGGTCAAATTGAC 58.480 33.333 17.16 17.16 46.23 3.18
1803 2042 8.642935 TGATTGTATTAGGTTGGTCAAATTGA 57.357 30.769 0.00 0.00 0.00 2.57
1839 2078 9.457436 ACTCCGAAGTTTATGTTGGTATATTTT 57.543 29.630 0.00 0.00 28.74 1.82
1840 2079 9.457436 AACTCCGAAGTTTATGTTGGTATATTT 57.543 29.630 0.00 0.00 43.28 1.40
1855 2094 7.551617 TCTTTTGAAAGTAGAAACTCCGAAGTT 59.448 33.333 3.63 0.00 40.87 2.66
1856 2095 7.046033 TCTTTTGAAAGTAGAAACTCCGAAGT 58.954 34.615 3.63 0.00 37.31 3.01
1857 2096 7.478520 TCTTTTGAAAGTAGAAACTCCGAAG 57.521 36.000 3.63 0.00 37.31 3.79
1858 2097 9.720769 ATATCTTTTGAAAGTAGAAACTCCGAA 57.279 29.630 3.63 0.00 37.31 4.30
1906 2145 9.936329 AGGTTGTCAATTTTATCACCCTAATAT 57.064 29.630 0.00 0.00 0.00 1.28
1908 2147 9.408648 CTAGGTTGTCAATTTTATCACCCTAAT 57.591 33.333 0.00 0.00 27.80 1.73
1909 2148 7.832187 CCTAGGTTGTCAATTTTATCACCCTAA 59.168 37.037 0.00 0.00 27.80 2.69
1910 2149 7.037153 ACCTAGGTTGTCAATTTTATCACCCTA 60.037 37.037 9.21 0.00 0.00 3.53
1911 2150 6.187682 CCTAGGTTGTCAATTTTATCACCCT 58.812 40.000 0.00 0.00 0.00 4.34
1912 2151 5.949952 ACCTAGGTTGTCAATTTTATCACCC 59.050 40.000 9.21 0.00 0.00 4.61
1913 2152 8.747538 ATACCTAGGTTGTCAATTTTATCACC 57.252 34.615 22.11 0.00 0.00 4.02
1915 2154 9.537192 CGTATACCTAGGTTGTCAATTTTATCA 57.463 33.333 22.11 0.00 0.00 2.15
1916 2155 8.493547 GCGTATACCTAGGTTGTCAATTTTATC 58.506 37.037 22.11 0.00 0.00 1.75
1917 2156 7.170320 CGCGTATACCTAGGTTGTCAATTTTAT 59.830 37.037 22.11 5.71 0.00 1.40
1918 2157 6.476380 CGCGTATACCTAGGTTGTCAATTTTA 59.524 38.462 22.11 0.00 0.00 1.52
1919 2158 5.292589 CGCGTATACCTAGGTTGTCAATTTT 59.707 40.000 22.11 0.00 0.00 1.82
1920 2159 4.807304 CGCGTATACCTAGGTTGTCAATTT 59.193 41.667 22.11 0.00 0.00 1.82
1921 2160 4.365723 CGCGTATACCTAGGTTGTCAATT 58.634 43.478 22.11 0.00 0.00 2.32
1922 2161 3.797865 GCGCGTATACCTAGGTTGTCAAT 60.798 47.826 22.11 9.64 0.00 2.57
1923 2162 2.480073 GCGCGTATACCTAGGTTGTCAA 60.480 50.000 22.11 0.75 0.00 3.18
1924 2163 1.066002 GCGCGTATACCTAGGTTGTCA 59.934 52.381 22.11 1.21 0.00 3.58
1925 2164 1.066002 TGCGCGTATACCTAGGTTGTC 59.934 52.381 22.11 9.56 0.00 3.18
1926 2165 1.066605 CTGCGCGTATACCTAGGTTGT 59.933 52.381 22.11 12.13 0.00 3.32
1927 2166 1.602165 CCTGCGCGTATACCTAGGTTG 60.602 57.143 22.11 9.15 0.00 3.77
1928 2167 0.672342 CCTGCGCGTATACCTAGGTT 59.328 55.000 22.11 10.62 0.00 3.50
1929 2168 0.179009 TCCTGCGCGTATACCTAGGT 60.179 55.000 20.57 20.57 0.00 3.08
1930 2169 0.240411 GTCCTGCGCGTATACCTAGG 59.760 60.000 7.41 7.41 0.00 3.02
1931 2170 1.236628 AGTCCTGCGCGTATACCTAG 58.763 55.000 8.43 0.00 0.00 3.02
1932 2171 1.335810 CAAGTCCTGCGCGTATACCTA 59.664 52.381 8.43 0.00 0.00 3.08
1933 2172 0.102481 CAAGTCCTGCGCGTATACCT 59.898 55.000 8.43 0.00 0.00 3.08
1934 2173 0.179119 ACAAGTCCTGCGCGTATACC 60.179 55.000 8.43 0.00 0.00 2.73
1935 2174 2.480224 TACAAGTCCTGCGCGTATAC 57.520 50.000 8.43 4.74 0.00 1.47
1936 2175 3.119388 AGTTTACAAGTCCTGCGCGTATA 60.119 43.478 8.43 0.00 0.00 1.47
1937 2176 1.997606 GTTTACAAGTCCTGCGCGTAT 59.002 47.619 8.43 0.00 0.00 3.06
1938 2177 1.000060 AGTTTACAAGTCCTGCGCGTA 60.000 47.619 8.43 0.71 0.00 4.42
1939 2178 0.249741 AGTTTACAAGTCCTGCGCGT 60.250 50.000 8.43 0.00 0.00 6.01
1940 2179 0.163788 CAGTTTACAAGTCCTGCGCG 59.836 55.000 0.00 0.00 0.00 6.86
1941 2180 1.508632 TCAGTTTACAAGTCCTGCGC 58.491 50.000 0.00 0.00 0.00 6.09
1942 2181 3.603857 CGTTTCAGTTTACAAGTCCTGCG 60.604 47.826 0.00 0.00 0.00 5.18
1943 2182 3.303791 CCGTTTCAGTTTACAAGTCCTGC 60.304 47.826 0.00 0.00 0.00 4.85
1944 2183 4.124238 TCCGTTTCAGTTTACAAGTCCTG 58.876 43.478 0.00 0.00 0.00 3.86
1945 2184 4.377897 CTCCGTTTCAGTTTACAAGTCCT 58.622 43.478 0.00 0.00 0.00 3.85
1946 2185 3.497262 CCTCCGTTTCAGTTTACAAGTCC 59.503 47.826 0.00 0.00 0.00 3.85
1947 2186 4.124970 ACCTCCGTTTCAGTTTACAAGTC 58.875 43.478 0.00 0.00 0.00 3.01
1948 2187 4.146745 ACCTCCGTTTCAGTTTACAAGT 57.853 40.909 0.00 0.00 0.00 3.16
1949 2188 5.295152 ACTACCTCCGTTTCAGTTTACAAG 58.705 41.667 0.00 0.00 0.00 3.16
1950 2189 5.280654 ACTACCTCCGTTTCAGTTTACAA 57.719 39.130 0.00 0.00 0.00 2.41
1951 2190 4.942761 ACTACCTCCGTTTCAGTTTACA 57.057 40.909 0.00 0.00 0.00 2.41
1952 2191 6.018589 ACTACTACCTCCGTTTCAGTTTAC 57.981 41.667 0.00 0.00 0.00 2.01
1953 2192 7.944729 ATACTACTACCTCCGTTTCAGTTTA 57.055 36.000 0.00 0.00 0.00 2.01
1954 2193 6.847421 ATACTACTACCTCCGTTTCAGTTT 57.153 37.500 0.00 0.00 0.00 2.66
1955 2194 7.944729 TTATACTACTACCTCCGTTTCAGTT 57.055 36.000 0.00 0.00 0.00 3.16
1956 2195 7.613411 ACTTTATACTACTACCTCCGTTTCAGT 59.387 37.037 0.00 0.00 0.00 3.41
1957 2196 7.914346 CACTTTATACTACTACCTCCGTTTCAG 59.086 40.741 0.00 0.00 0.00 3.02
1958 2197 7.148018 CCACTTTATACTACTACCTCCGTTTCA 60.148 40.741 0.00 0.00 0.00 2.69
1959 2198 7.067494 TCCACTTTATACTACTACCTCCGTTTC 59.933 40.741 0.00 0.00 0.00 2.78
1960 2199 6.891908 TCCACTTTATACTACTACCTCCGTTT 59.108 38.462 0.00 0.00 0.00 3.60
1961 2200 6.426587 TCCACTTTATACTACTACCTCCGTT 58.573 40.000 0.00 0.00 0.00 4.44
1962 2201 6.006275 TCCACTTTATACTACTACCTCCGT 57.994 41.667 0.00 0.00 0.00 4.69
1963 2202 6.204495 GTCTCCACTTTATACTACTACCTCCG 59.796 46.154 0.00 0.00 0.00 4.63
1964 2203 7.013178 GTGTCTCCACTTTATACTACTACCTCC 59.987 44.444 0.00 0.00 38.61 4.30
1965 2204 7.929159 GTGTCTCCACTTTATACTACTACCTC 58.071 42.308 0.00 0.00 38.61 3.85
1966 2205 7.878547 GTGTCTCCACTTTATACTACTACCT 57.121 40.000 0.00 0.00 38.61 3.08
1981 2220 3.435671 CGTCCCAAAATAAGTGTCTCCAC 59.564 47.826 0.00 0.00 42.17 4.02
1982 2221 3.558321 CCGTCCCAAAATAAGTGTCTCCA 60.558 47.826 0.00 0.00 0.00 3.86
1983 2222 3.007635 CCGTCCCAAAATAAGTGTCTCC 58.992 50.000 0.00 0.00 0.00 3.71
1984 2223 3.933332 CTCCGTCCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
1985 2224 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
1986 2225 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
1987 2226 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
1988 2227 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
1989 2228 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
2073 2314 6.360681 GCGCATGTAGAATTGATAACCATTTC 59.639 38.462 0.30 0.00 36.11 2.17
2077 2318 3.247411 CGCGCATGTAGAATTGATAACCA 59.753 43.478 8.75 0.00 0.00 3.67
2225 2481 9.645059 TCTGTCAGTTCTATGATAAACTTTCAG 57.355 33.333 0.00 13.92 36.29 3.02
2401 2658 8.514330 AGTAACAGTTTAAATTGTGACCTCAA 57.486 30.769 21.69 1.46 32.08 3.02
2521 2781 5.972107 AGCAAATTCTACACATTCAGCTT 57.028 34.783 0.00 0.00 0.00 3.74
2646 2909 4.819088 AGCTCCTCTTTTTGAGAAGTTGAC 59.181 41.667 0.00 0.00 45.39 3.18
2693 2956 5.045942 TCAAGGCATCTAATCACTGTACCAA 60.046 40.000 0.00 0.00 0.00 3.67
2779 3045 3.244033 TGCCAAAAGTGAACAAAGTGG 57.756 42.857 0.00 0.00 0.00 4.00
2896 3164 5.381174 TCAATGATTTTCCTGCTTCAGTG 57.619 39.130 0.00 0.00 35.98 3.66
2969 3237 1.736645 CTGGCGGTGGTAGTTCACG 60.737 63.158 0.00 0.00 38.46 4.35
3032 3300 5.863397 CAGAGAGCTTCTCACTTAAACTCTG 59.137 44.000 13.42 0.00 45.73 3.35
3073 3341 2.832129 CACCAGGTCCTCTTTAGCACTA 59.168 50.000 0.00 0.00 0.00 2.74
3089 3357 0.315886 TTTGCATGCTGCTTCACCAG 59.684 50.000 20.33 0.00 45.31 4.00
3174 3443 7.324178 TCTGAATAAAGAGAGGAAACTACTGC 58.676 38.462 0.00 0.00 44.43 4.40
3660 3977 4.012374 GCATCTTCAATTCCTTGGACAGA 58.988 43.478 0.00 0.00 32.95 3.41
3663 3980 3.064545 CGAGCATCTTCAATTCCTTGGAC 59.935 47.826 0.00 0.00 32.95 4.02
3684 4001 0.318441 TCAGGTCTCTTTCCAGTGCG 59.682 55.000 0.00 0.00 0.00 5.34
3700 4017 0.887836 TCTGCTGCTTGGTTGCTCAG 60.888 55.000 0.00 0.00 36.43 3.35
3753 4070 5.305585 TCTGCCTCGACTCTTGTAATTTTT 58.694 37.500 0.00 0.00 0.00 1.94
3787 4104 3.436700 TCTATGTGTCACATGGCGTAG 57.563 47.619 25.63 15.57 39.53 3.51
3789 4106 2.028112 AGTTCTATGTGTCACATGGCGT 60.028 45.455 25.63 9.68 39.53 5.68
3810 4127 7.445945 GCCTAGAAGAATCATTAGCTAAGGAA 58.554 38.462 23.25 8.54 29.27 3.36
3819 4136 5.428457 TGGAACAGGCCTAGAAGAATCATTA 59.572 40.000 3.98 0.00 0.00 1.90
4122 4439 1.690893 GAGATATCTCTGGCCACAGCA 59.309 52.381 23.06 0.00 44.54 4.41
4129 4446 2.352617 CGCCTCTTGAGATATCTCTGGC 60.353 54.545 28.82 28.82 43.25 4.85
4291 4608 1.406539 CAGGTCAACAAGCTTGCTGTT 59.593 47.619 26.27 11.47 37.49 3.16
4393 4710 1.273048 TGATTCCAACTGCAATGCCAC 59.727 47.619 1.53 0.00 0.00 5.01
4419 4736 3.136763 CTGAAGCTTCTCAACTTCTGCA 58.863 45.455 26.09 2.13 42.27 4.41
4582 4899 0.586319 GCTTTGTACTGCGCAGACAA 59.414 50.000 42.03 36.20 31.54 3.18
4594 4911 3.011818 CCATGTCTGCATCTGCTTTGTA 58.988 45.455 3.53 0.00 42.66 2.41
4745 5062 1.031571 CCAAGCCTCTATTTGCGCCA 61.032 55.000 4.18 0.00 0.00 5.69
4749 5066 3.376546 CAGTCTTCCAAGCCTCTATTTGC 59.623 47.826 0.00 0.00 0.00 3.68
4762 5079 4.835056 TGTTCTCTCTGATTCAGTCTTCCA 59.165 41.667 13.23 2.89 32.61 3.53
4763 5080 5.047377 AGTGTTCTCTCTGATTCAGTCTTCC 60.047 44.000 13.23 0.55 32.61 3.46
4786 5103 0.965439 TTGGCGGATTCCACCAAAAG 59.035 50.000 20.46 0.00 40.42 2.27
4797 5114 1.094785 CCAACGATTCTTTGGCGGAT 58.905 50.000 8.80 0.00 37.31 4.18
4819 5136 1.276421 GTTTGCTACCAGGAGCTGAGA 59.724 52.381 3.04 0.00 43.27 3.27
4854 5171 4.739587 TGCATTCACCATTACATGCAAT 57.260 36.364 3.24 0.00 46.95 3.56
4865 5182 1.059098 AGACTCCAGTGCATTCACCA 58.941 50.000 0.00 0.00 44.16 4.17
4887 5204 0.035056 ATTCCCTCTCCTTTGCCACG 60.035 55.000 0.00 0.00 0.00 4.94
4889 5206 3.788142 AGAATATTCCCTCTCCTTTGCCA 59.212 43.478 11.92 0.00 0.00 4.92
4914 5231 3.558746 CCTCCAGTTGCATCTTGACTTCT 60.559 47.826 0.00 0.00 0.00 2.85
4917 5234 1.612726 GCCTCCAGTTGCATCTTGACT 60.613 52.381 0.00 0.00 0.00 3.41
4930 5247 2.045536 GCCCTCAACTGCCTCCAG 60.046 66.667 0.00 0.00 44.80 3.86
5370 5687 2.101582 CCTAGGCTAGTGGCAAGTACTG 59.898 54.545 19.68 0.00 44.01 2.74
5371 5688 2.292323 ACCTAGGCTAGTGGCAAGTACT 60.292 50.000 19.68 0.00 44.01 2.73
5372 5689 2.108970 ACCTAGGCTAGTGGCAAGTAC 58.891 52.381 19.68 0.00 44.01 2.73
5373 5690 2.544844 ACCTAGGCTAGTGGCAAGTA 57.455 50.000 19.68 0.00 44.01 2.24
5374 5691 1.555533 GAACCTAGGCTAGTGGCAAGT 59.444 52.381 19.68 6.89 44.01 3.16
5375 5692 1.834263 AGAACCTAGGCTAGTGGCAAG 59.166 52.381 19.68 6.27 44.01 4.01
5376 5693 1.952621 AGAACCTAGGCTAGTGGCAA 58.047 50.000 19.68 0.00 44.01 4.52
5377 5694 2.840640 TAGAACCTAGGCTAGTGGCA 57.159 50.000 19.68 0.00 44.01 4.92
5380 5697 3.181474 GGTGCTTAGAACCTAGGCTAGTG 60.181 52.174 19.68 13.35 34.66 2.74
5403 5720 5.840693 TGATTAGACCATATGCCTTGAGAGA 59.159 40.000 0.00 0.00 0.00 3.10
5446 5765 9.745018 AAGATGATGATAATTGTTATACAGGGG 57.255 33.333 0.00 0.00 0.00 4.79
5461 5783 4.768968 TCTCCTGCGATGAAGATGATGATA 59.231 41.667 0.00 0.00 0.00 2.15
5579 5901 2.202797 CCAGGCTCGGTCATCACG 60.203 66.667 0.00 0.00 0.00 4.35
5684 6006 2.825836 CAGCCCCCGTTGCTCATC 60.826 66.667 0.00 0.00 36.81 2.92
5935 6261 2.076863 GACAGGACCGAAAATGACAGG 58.923 52.381 0.00 0.00 0.00 4.00
5980 6306 3.243670 GCACTACTAGCATCTGCATCTGA 60.244 47.826 4.79 0.00 45.16 3.27
5981 6307 3.058450 GCACTACTAGCATCTGCATCTG 58.942 50.000 4.79 0.00 45.16 2.90
6002 6329 5.446143 TGGGTAACATTTTAGTGCAAGTG 57.554 39.130 0.00 0.00 39.74 3.16
6037 6366 3.524541 CAGTTTTGCTGCTTGGTCTTTT 58.475 40.909 0.00 0.00 38.52 2.27
6092 6421 2.671070 CGTGGCAAATTAGTGAAAGCCC 60.671 50.000 0.00 0.00 41.33 5.19
6094 6423 2.979813 CACGTGGCAAATTAGTGAAAGC 59.020 45.455 7.95 0.00 35.03 3.51
6095 6424 4.223320 ACACGTGGCAAATTAGTGAAAG 57.777 40.909 21.57 0.00 36.71 2.62
6174 6503 9.195411 GTGATCTGCAGTTTATTTCATTTTGAA 57.805 29.630 14.67 0.00 34.03 2.69
6175 6504 8.579006 AGTGATCTGCAGTTTATTTCATTTTGA 58.421 29.630 14.67 0.00 0.00 2.69
6176 6505 8.752766 AGTGATCTGCAGTTTATTTCATTTTG 57.247 30.769 14.67 0.00 0.00 2.44
6179 6508 8.579006 TCAAAGTGATCTGCAGTTTATTTCATT 58.421 29.630 14.67 3.24 45.88 2.57
6181 6510 7.445096 TCTCAAAGTGATCTGCAGTTTATTTCA 59.555 33.333 14.67 5.96 45.88 2.69
6182 6511 7.810658 TCTCAAAGTGATCTGCAGTTTATTTC 58.189 34.615 14.67 3.49 45.88 2.17
6184 6513 6.128063 GCTCTCAAAGTGATCTGCAGTTTATT 60.128 38.462 14.67 0.00 45.88 1.40
6186 6515 4.692625 GCTCTCAAAGTGATCTGCAGTTTA 59.307 41.667 14.67 0.00 45.88 2.01
6216 6545 3.420893 TGAAACAAGGACATGGATCCAC 58.579 45.455 18.99 4.15 41.73 4.02
6222 6551 4.300803 CACACATTGAAACAAGGACATGG 58.699 43.478 0.00 0.00 0.00 3.66
6232 6566 1.268999 TGCGCTTCCACACATTGAAAC 60.269 47.619 9.73 0.00 0.00 2.78
6265 6599 1.149174 ATGCCCATCACCCATCGAC 59.851 57.895 0.00 0.00 0.00 4.20
6274 6608 4.025040 GGAATGTATCTCATGCCCATCA 57.975 45.455 0.00 0.00 44.61 3.07
6301 6637 4.649088 AAAAACATAATAAGGAGGCGCC 57.351 40.909 21.89 21.89 0.00 6.53
6320 6656 9.232882 ACACATAATAAGGAGATACCCCTAAAA 57.767 33.333 0.00 0.00 40.05 1.52
6321 6657 8.808240 ACACATAATAAGGAGATACCCCTAAA 57.192 34.615 0.00 0.00 40.05 1.85
6322 6658 8.808240 AACACATAATAAGGAGATACCCCTAA 57.192 34.615 0.00 0.00 40.05 2.69
6323 6659 8.239478 AGAACACATAATAAGGAGATACCCCTA 58.761 37.037 0.00 0.00 40.05 3.53
6324 6660 7.082972 AGAACACATAATAAGGAGATACCCCT 58.917 38.462 0.00 0.00 40.05 4.79
6325 6661 7.016268 TGAGAACACATAATAAGGAGATACCCC 59.984 40.741 0.00 0.00 40.05 4.95
6326 6662 7.963532 TGAGAACACATAATAAGGAGATACCC 58.036 38.462 0.00 0.00 40.05 3.69
6327 6663 9.262358 GTTGAGAACACATAATAAGGAGATACC 57.738 37.037 0.00 0.00 39.35 2.73
6328 6664 9.262358 GGTTGAGAACACATAATAAGGAGATAC 57.738 37.037 0.00 0.00 0.00 2.24
6329 6665 9.213777 AGGTTGAGAACACATAATAAGGAGATA 57.786 33.333 0.00 0.00 0.00 1.98
6330 6666 8.095452 AGGTTGAGAACACATAATAAGGAGAT 57.905 34.615 0.00 0.00 0.00 2.75
6331 6667 7.364762 GGAGGTTGAGAACACATAATAAGGAGA 60.365 40.741 0.00 0.00 0.00 3.71
6332 6668 6.763610 GGAGGTTGAGAACACATAATAAGGAG 59.236 42.308 0.00 0.00 0.00 3.69
6333 6669 6.443849 AGGAGGTTGAGAACACATAATAAGGA 59.556 38.462 0.00 0.00 0.00 3.36
6334 6670 6.653989 AGGAGGTTGAGAACACATAATAAGG 58.346 40.000 0.00 0.00 0.00 2.69
6335 6671 8.567285 AAAGGAGGTTGAGAACACATAATAAG 57.433 34.615 0.00 0.00 0.00 1.73
6336 6672 8.792633 CAAAAGGAGGTTGAGAACACATAATAA 58.207 33.333 0.00 0.00 0.00 1.40
6337 6673 7.942341 ACAAAAGGAGGTTGAGAACACATAATA 59.058 33.333 0.00 0.00 0.00 0.98
6338 6674 6.777580 ACAAAAGGAGGTTGAGAACACATAAT 59.222 34.615 0.00 0.00 0.00 1.28
6339 6675 6.126409 ACAAAAGGAGGTTGAGAACACATAA 58.874 36.000 0.00 0.00 0.00 1.90
6340 6676 5.690865 ACAAAAGGAGGTTGAGAACACATA 58.309 37.500 0.00 0.00 0.00 2.29
6341 6677 4.536765 ACAAAAGGAGGTTGAGAACACAT 58.463 39.130 0.00 0.00 0.00 3.21
6342 6678 3.963129 ACAAAAGGAGGTTGAGAACACA 58.037 40.909 0.00 0.00 0.00 3.72
6343 6679 6.445357 TTTACAAAAGGAGGTTGAGAACAC 57.555 37.500 0.00 0.00 0.00 3.32
6344 6680 6.403855 CGTTTTACAAAAGGAGGTTGAGAACA 60.404 38.462 1.81 0.00 36.23 3.18
6345 6681 5.969435 CGTTTTACAAAAGGAGGTTGAGAAC 59.031 40.000 1.81 0.00 36.23 3.01
6346 6682 5.881443 TCGTTTTACAAAAGGAGGTTGAGAA 59.119 36.000 5.89 0.00 37.72 2.87
6347 6683 5.430007 TCGTTTTACAAAAGGAGGTTGAGA 58.570 37.500 5.89 0.00 37.72 3.27
6348 6684 5.744666 TCGTTTTACAAAAGGAGGTTGAG 57.255 39.130 5.89 0.00 37.72 3.02
6349 6685 6.324042 GTTTCGTTTTACAAAAGGAGGTTGA 58.676 36.000 9.11 0.00 41.83 3.18
6350 6686 5.517411 GGTTTCGTTTTACAAAAGGAGGTTG 59.483 40.000 9.11 0.00 41.83 3.77
6351 6687 5.419788 AGGTTTCGTTTTACAAAAGGAGGTT 59.580 36.000 9.11 0.00 41.83 3.50
6352 6688 4.951715 AGGTTTCGTTTTACAAAAGGAGGT 59.048 37.500 9.11 0.00 41.83 3.85
6353 6689 5.509716 AGGTTTCGTTTTACAAAAGGAGG 57.490 39.130 9.11 0.00 41.83 4.30
6354 6690 7.867752 TCATAGGTTTCGTTTTACAAAAGGAG 58.132 34.615 9.11 0.00 41.83 3.69
6355 6691 7.804843 TCATAGGTTTCGTTTTACAAAAGGA 57.195 32.000 5.89 5.89 39.97 3.36
6356 6692 9.124807 GAATCATAGGTTTCGTTTTACAAAAGG 57.875 33.333 1.63 1.63 35.67 3.11
6357 6693 9.124807 GGAATCATAGGTTTCGTTTTACAAAAG 57.875 33.333 0.00 0.00 0.00 2.27
6358 6694 8.852135 AGGAATCATAGGTTTCGTTTTACAAAA 58.148 29.630 0.00 0.00 0.00 2.44
6359 6695 8.398878 AGGAATCATAGGTTTCGTTTTACAAA 57.601 30.769 0.00 0.00 0.00 2.83
6360 6696 7.881232 AGAGGAATCATAGGTTTCGTTTTACAA 59.119 33.333 0.00 0.00 0.00 2.41
6361 6697 7.333423 CAGAGGAATCATAGGTTTCGTTTTACA 59.667 37.037 0.00 0.00 0.00 2.41
6362 6698 7.548075 TCAGAGGAATCATAGGTTTCGTTTTAC 59.452 37.037 0.00 0.00 0.00 2.01
6363 6699 7.617225 TCAGAGGAATCATAGGTTTCGTTTTA 58.383 34.615 0.00 0.00 0.00 1.52
6364 6700 6.472887 TCAGAGGAATCATAGGTTTCGTTTT 58.527 36.000 0.00 0.00 0.00 2.43
6365 6701 6.049955 TCAGAGGAATCATAGGTTTCGTTT 57.950 37.500 0.00 0.00 0.00 3.60
6366 6702 5.677319 TCAGAGGAATCATAGGTTTCGTT 57.323 39.130 0.00 0.00 0.00 3.85
6367 6703 5.677319 TTCAGAGGAATCATAGGTTTCGT 57.323 39.130 0.00 0.00 0.00 3.85
6368 6704 5.049818 GCATTCAGAGGAATCATAGGTTTCG 60.050 44.000 0.00 0.00 41.78 3.46
6369 6705 5.824624 TGCATTCAGAGGAATCATAGGTTTC 59.175 40.000 0.00 0.00 41.78 2.78
6370 6706 5.759059 TGCATTCAGAGGAATCATAGGTTT 58.241 37.500 0.00 0.00 41.78 3.27
6371 6707 5.374921 CTGCATTCAGAGGAATCATAGGTT 58.625 41.667 0.00 0.00 41.78 3.50
6372 6708 4.746089 GCTGCATTCAGAGGAATCATAGGT 60.746 45.833 0.00 0.00 41.78 3.08
6373 6709 3.752222 GCTGCATTCAGAGGAATCATAGG 59.248 47.826 0.00 0.00 41.78 2.57
6374 6710 4.643463 AGCTGCATTCAGAGGAATCATAG 58.357 43.478 1.02 0.00 41.78 2.23
6375 6711 4.701651 AGCTGCATTCAGAGGAATCATA 57.298 40.909 1.02 0.00 41.78 2.15
6376 6712 3.579534 AGCTGCATTCAGAGGAATCAT 57.420 42.857 1.02 0.00 41.78 2.45
6377 6713 4.492494 TTAGCTGCATTCAGAGGAATCA 57.508 40.909 1.02 0.00 41.78 2.57
6378 6714 5.356470 ACTTTTAGCTGCATTCAGAGGAATC 59.644 40.000 1.02 0.00 41.78 2.52
6379 6715 5.259632 ACTTTTAGCTGCATTCAGAGGAAT 58.740 37.500 1.02 0.00 44.51 3.01
6380 6716 4.655963 ACTTTTAGCTGCATTCAGAGGAA 58.344 39.130 1.02 0.00 42.95 3.36
6381 6717 4.292186 ACTTTTAGCTGCATTCAGAGGA 57.708 40.909 1.02 0.00 42.95 3.71
6382 6718 5.382618 AAACTTTTAGCTGCATTCAGAGG 57.617 39.130 1.02 0.00 42.95 3.69
6383 6719 6.798959 GTGTAAACTTTTAGCTGCATTCAGAG 59.201 38.462 1.02 0.00 42.95 3.35
6384 6720 6.262049 TGTGTAAACTTTTAGCTGCATTCAGA 59.738 34.615 1.02 0.00 42.95 3.27
6385 6721 6.360681 GTGTGTAAACTTTTAGCTGCATTCAG 59.639 38.462 1.02 0.00 43.16 3.02
6386 6722 6.183360 TGTGTGTAAACTTTTAGCTGCATTCA 60.183 34.615 1.02 0.00 0.00 2.57
6387 6723 6.205784 TGTGTGTAAACTTTTAGCTGCATTC 58.794 36.000 1.02 0.00 0.00 2.67
6388 6724 6.142818 TGTGTGTAAACTTTTAGCTGCATT 57.857 33.333 1.02 0.00 0.00 3.56
6389 6725 5.766150 TGTGTGTAAACTTTTAGCTGCAT 57.234 34.783 1.02 0.00 0.00 3.96
6390 6726 5.766150 ATGTGTGTAAACTTTTAGCTGCA 57.234 34.783 1.02 0.00 0.00 4.41
6391 6727 9.834628 TTAATATGTGTGTAAACTTTTAGCTGC 57.165 29.630 0.00 0.00 0.00 5.25
6422 6758 3.884091 TGGCGTGCTTTTAACTCCTAAAA 59.116 39.130 0.00 0.00 37.18 1.52
6426 6762 1.523758 CTGGCGTGCTTTTAACTCCT 58.476 50.000 0.00 0.00 0.00 3.69
6463 6799 1.377229 GGGTCAAACCATCACGGGA 59.623 57.895 0.00 0.00 41.02 5.14
6495 6831 1.521010 CTGGATGGCAGAGTGAGCG 60.521 63.158 0.00 0.00 0.00 5.03
6504 6840 1.494721 GGGGATAGTTTCTGGATGGCA 59.505 52.381 0.00 0.00 0.00 4.92
6509 6845 3.455910 CACATCAGGGGATAGTTTCTGGA 59.544 47.826 0.00 0.00 30.87 3.86
6686 7035 5.675684 TGCCAACAGAATATGAGTAGTGA 57.324 39.130 0.00 0.00 0.00 3.41
6695 7044 7.226441 TCTATTGTGCTATGCCAACAGAATAT 58.774 34.615 0.00 0.00 31.57 1.28
6742 7091 1.915141 ACAGCAAATTCTGACCCAGG 58.085 50.000 1.40 0.00 37.51 4.45
6744 7093 3.788227 ACTACAGCAAATTCTGACCCA 57.212 42.857 1.40 0.00 37.51 4.51
6745 7094 6.569179 TTAAACTACAGCAAATTCTGACCC 57.431 37.500 1.40 0.00 37.51 4.46
6746 7095 7.918562 TGTTTTAAACTACAGCAAATTCTGACC 59.081 33.333 9.33 0.00 37.51 4.02
6747 7096 8.850454 TGTTTTAAACTACAGCAAATTCTGAC 57.150 30.769 9.33 0.00 37.51 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.