Multiple sequence alignment - TraesCS4D01G105100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G105100 chr4D 100.000 6025 0 0 1 6025 83275164 83281188 0.000000e+00 11127.0
1 TraesCS4D01G105100 chr4D 100.000 29 0 0 4583 4611 23423045 23423017 3.000000e-03 54.7
2 TraesCS4D01G105100 chr4A 96.068 2289 63 19 3747 6025 495798574 495800845 0.000000e+00 3703.0
3 TraesCS4D01G105100 chr4A 96.292 1915 56 11 61 1966 495795354 495797262 0.000000e+00 3129.0
4 TraesCS4D01G105100 chr4A 97.182 887 19 3 2465 3345 495797691 495798577 0.000000e+00 1495.0
5 TraesCS4D01G105100 chr4A 95.729 398 17 0 1960 2357 495797292 495797689 5.090000e-180 641.0
6 TraesCS4D01G105100 chr4A 82.192 146 20 6 4585 4726 665186887 665186744 2.950000e-23 121.0
7 TraesCS4D01G105100 chr4B 94.442 2303 71 30 3747 6025 118292633 118294902 0.000000e+00 3491.0
8 TraesCS4D01G105100 chr4B 95.723 1847 65 7 1 1834 118289379 118291224 0.000000e+00 2961.0
9 TraesCS4D01G105100 chr4B 93.073 895 34 6 2465 3345 118291756 118292636 0.000000e+00 1284.0
10 TraesCS4D01G105100 chr4B 95.226 398 18 1 1960 2357 118291358 118291754 3.960000e-176 628.0
11 TraesCS4D01G105100 chr4B 87.599 379 41 6 3370 3744 106842295 106841919 9.270000e-118 435.0
12 TraesCS4D01G105100 chr4B 93.701 127 8 0 1836 1962 118291197 118291323 2.220000e-44 191.0
13 TraesCS4D01G105100 chr4B 100.000 29 0 0 4583 4611 35523123 35523095 3.000000e-03 54.7
14 TraesCS4D01G105100 chr3D 97.311 409 9 1 3342 3748 19948087 19948495 0.000000e+00 693.0
15 TraesCS4D01G105100 chr3D 79.137 139 21 7 4594 4729 169742125 169741992 8.320000e-14 89.8
16 TraesCS4D01G105100 chr3A 95.377 411 19 0 3342 3752 155051748 155052158 0.000000e+00 654.0
17 TraesCS4D01G105100 chr1A 94.161 411 24 0 3342 3752 9752829 9753239 1.430000e-175 627.0
18 TraesCS4D01G105100 chr1A 94.495 109 6 0 2358 2466 19894865 19894973 1.040000e-37 169.0
19 TraesCS4D01G105100 chr1A 93.827 81 5 0 4645 4725 432985408 432985328 8.200000e-24 122.0
20 TraesCS4D01G105100 chr5A 92.141 369 27 2 3342 3708 546822704 546822336 2.490000e-143 520.0
21 TraesCS4D01G105100 chr5A 89.286 112 5 4 4614 4725 390368287 390368183 3.790000e-27 134.0
22 TraesCS4D01G105100 chr5A 97.959 49 1 0 3704 3752 546822362 546822314 1.080000e-12 86.1
23 TraesCS4D01G105100 chr3B 91.870 369 23 5 3336 3699 3795299 3795665 5.390000e-140 508.0
24 TraesCS4D01G105100 chr3B 91.057 369 26 4 3336 3699 4693802 4694168 5.430000e-135 492.0
25 TraesCS4D01G105100 chr3B 92.727 110 8 0 2357 2466 252930355 252930464 6.250000e-35 159.0
26 TraesCS4D01G105100 chr3B 86.184 152 11 3 4583 4724 818302687 818302536 8.090000e-34 156.0
27 TraesCS4D01G105100 chr2B 87.411 421 47 2 3342 3761 399340626 399340211 4.220000e-131 479.0
28 TraesCS4D01G105100 chr6B 82.587 402 32 18 3350 3749 8434454 8434819 2.710000e-83 320.0
29 TraesCS4D01G105100 chr6B 83.784 148 16 6 4583 4725 431701069 431701213 3.790000e-27 134.0
30 TraesCS4D01G105100 chr2D 93.750 112 6 1 2356 2466 194730997 194731108 3.740000e-37 167.0
31 TraesCS4D01G105100 chrUn 92.241 116 9 0 2356 2471 74611456 74611571 1.340000e-36 165.0
32 TraesCS4D01G105100 chr7D 93.578 109 7 0 2359 2467 161297217 161297109 4.830000e-36 163.0
33 TraesCS4D01G105100 chr6A 90.984 122 10 1 2358 2478 205107072 205107193 4.830000e-36 163.0
34 TraesCS4D01G105100 chr5D 92.857 112 8 0 4614 4725 307088469 307088580 4.830000e-36 163.0
35 TraesCS4D01G105100 chr5B 92.793 111 7 1 2360 2470 533893095 533892986 6.250000e-35 159.0
36 TraesCS4D01G105100 chr5B 91.379 116 7 3 2356 2470 115399116 115399229 8.090000e-34 156.0
37 TraesCS4D01G105100 chr5B 96.970 33 0 1 3721 3752 53766452 53766484 3.000000e-03 54.7
38 TraesCS4D01G105100 chr1B 91.964 112 9 0 2359 2470 102627105 102626994 2.250000e-34 158.0
39 TraesCS4D01G105100 chr1B 77.703 148 20 10 4583 4725 83972142 83972281 1.800000e-10 78.7
40 TraesCS4D01G105100 chr7B 78.616 159 11 12 4582 4717 473404420 473404578 3.870000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G105100 chr4D 83275164 83281188 6024 False 11127 11127 100.00000 1 6025 1 chr4D.!!$F1 6024
1 TraesCS4D01G105100 chr4A 495795354 495800845 5491 False 2242 3703 96.31775 61 6025 4 chr4A.!!$F1 5964
2 TraesCS4D01G105100 chr4B 118289379 118294902 5523 False 1711 3491 94.43300 1 6025 5 chr4B.!!$F1 6024

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
708 715 0.385974 GATGCGTGTGTGTTTCTGCC 60.386 55.000 0.00 0.0 0.00 4.85 F
888 897 0.807496 GTTTGCTGAGATCTGTGGGC 59.193 55.000 0.00 0.0 0.00 5.36 F
916 925 1.339631 TGAATTGGACCGCCTCGATTT 60.340 47.619 0.00 0.0 34.31 2.17 F
1007 1016 2.299993 TTGGTCGAGCAGATGATGAC 57.700 50.000 17.81 0.0 0.00 3.06 F
2379 2432 1.489230 ACTCCCTCCGTTCACTTTTGT 59.511 47.619 0.00 0.0 0.00 2.83 F
3477 3550 0.108138 AATCGCTGGAGTCGGGAAAG 60.108 55.000 0.00 0.0 0.00 2.62 F
3540 3613 0.034896 ACCAGCCACTTACCAGTTCG 59.965 55.000 0.00 0.0 0.00 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2359 2412 1.489230 ACAAAAGTGAACGGAGGGAGT 59.511 47.619 0.0 0.0 0.00 3.85 R
2360 2413 2.256117 ACAAAAGTGAACGGAGGGAG 57.744 50.000 0.0 0.0 0.00 4.30 R
2366 2419 2.867975 ACGGACTTACAAAAGTGAACGG 59.132 45.455 0.0 0.0 46.09 4.44 R
2399 2452 3.426615 TGAACTGTTTTGGGTGTTGTCT 58.573 40.909 0.0 0.0 0.00 3.41 R
3521 3594 0.034896 CGAACTGGTAAGTGGCTGGT 59.965 55.000 0.0 0.0 36.51 4.00 R
4896 4997 0.115349 AGAGTAGGAGGCTGTGGTGT 59.885 55.000 0.0 0.0 0.00 4.16 R
5418 5519 0.320683 TGCTCCACATTCCACTGACG 60.321 55.000 0.0 0.0 0.00 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.325919 GAATCAGGTCCATAGACTGTCTAG 57.674 45.833 20.95 13.28 43.05 2.43
41 42 2.311124 AGCGACAACTATAAGCACCC 57.689 50.000 0.00 0.00 0.00 4.61
143 145 4.396166 GTGAAACTTGGGTCACATGGATAG 59.604 45.833 0.00 0.00 43.02 2.08
155 157 6.404734 GGTCACATGGATAGTAAGCAAAAAGG 60.405 42.308 0.00 0.00 0.00 3.11
276 279 5.403766 CCCTCATCGAAGACAATAATTCTCG 59.596 44.000 0.00 0.00 42.51 4.04
451 458 3.434453 CCATTCGTCTCCTACTCTCCTCT 60.434 52.174 0.00 0.00 0.00 3.69
463 470 2.123251 TCCTCTCCCATCCCTCGC 60.123 66.667 0.00 0.00 0.00 5.03
514 521 2.678336 CCCAAGATTAGCTCCAACGAAC 59.322 50.000 0.00 0.00 0.00 3.95
521 528 1.878953 AGCTCCAACGAACACGAATT 58.121 45.000 0.00 0.00 0.00 2.17
605 612 2.031683 CGGCCGAATTGGTGAGTATTTC 59.968 50.000 24.07 0.00 41.21 2.17
708 715 0.385974 GATGCGTGTGTGTTTCTGCC 60.386 55.000 0.00 0.00 0.00 4.85
888 897 0.807496 GTTTGCTGAGATCTGTGGGC 59.193 55.000 0.00 0.00 0.00 5.36
916 925 1.339631 TGAATTGGACCGCCTCGATTT 60.340 47.619 0.00 0.00 34.31 2.17
1007 1016 2.299993 TTGGTCGAGCAGATGATGAC 57.700 50.000 17.81 0.00 0.00 3.06
1335 1344 2.743126 CGCATTTGCCAATGGTTTTGAT 59.257 40.909 12.07 0.00 40.36 2.57
1341 1350 5.486735 TTGCCAATGGTTTTGATGAGATT 57.513 34.783 0.00 0.00 0.00 2.40
1880 1896 2.340210 TACACTCTGCTGGTTTTGCA 57.660 45.000 0.00 0.00 38.81 4.08
1973 2026 4.053469 TGATCATGCTGCCAAATGAATG 57.947 40.909 5.41 0.00 36.44 2.67
2031 2084 8.894768 GTATGCAATACTAGAGAATTCCTTGT 57.105 34.615 0.65 8.66 46.23 3.16
2058 2111 3.377253 AGGATTGCCAAGATGACATGT 57.623 42.857 0.00 0.00 36.29 3.21
2137 2190 3.201290 GTTGCTCACACCTGATAGGATG 58.799 50.000 1.13 0.24 37.67 3.51
2257 2310 4.864704 TCTTCCTTGTAAAATTGCACCC 57.135 40.909 0.00 0.00 0.00 4.61
2332 2385 5.586243 CCTTAATGGACAATGGTACAGACAG 59.414 44.000 0.00 0.00 42.34 3.51
2334 2387 7.580688 CCTTAATGGACAATGGTACAGACAGTA 60.581 40.741 0.00 0.00 42.34 2.74
2363 2416 8.749026 TTGCATAGCTACCTATATAGTACTCC 57.251 38.462 0.00 0.00 33.01 3.85
2364 2417 7.288560 TGCATAGCTACCTATATAGTACTCCC 58.711 42.308 0.00 0.00 33.01 4.30
2365 2418 7.129038 TGCATAGCTACCTATATAGTACTCCCT 59.871 40.741 0.00 0.88 33.01 4.20
2366 2419 7.662669 GCATAGCTACCTATATAGTACTCCCTC 59.337 44.444 0.00 0.00 33.01 4.30
2367 2420 6.579850 AGCTACCTATATAGTACTCCCTCC 57.420 45.833 0.00 0.00 0.00 4.30
2368 2421 5.130809 AGCTACCTATATAGTACTCCCTCCG 59.869 48.000 0.00 0.00 0.00 4.63
2369 2422 5.104569 GCTACCTATATAGTACTCCCTCCGT 60.105 48.000 0.00 0.00 0.00 4.69
2370 2423 5.857106 ACCTATATAGTACTCCCTCCGTT 57.143 43.478 0.00 0.00 0.00 4.44
2371 2424 5.814481 ACCTATATAGTACTCCCTCCGTTC 58.186 45.833 0.00 0.00 0.00 3.95
2372 2425 5.311649 ACCTATATAGTACTCCCTCCGTTCA 59.688 44.000 0.00 0.00 0.00 3.18
2373 2426 5.647225 CCTATATAGTACTCCCTCCGTTCAC 59.353 48.000 0.00 0.00 0.00 3.18
2374 2427 3.666345 ATAGTACTCCCTCCGTTCACT 57.334 47.619 0.00 0.00 0.00 3.41
2375 2428 2.305858 AGTACTCCCTCCGTTCACTT 57.694 50.000 0.00 0.00 0.00 3.16
2376 2429 2.606378 AGTACTCCCTCCGTTCACTTT 58.394 47.619 0.00 0.00 0.00 2.66
2377 2430 2.970640 AGTACTCCCTCCGTTCACTTTT 59.029 45.455 0.00 0.00 0.00 2.27
2378 2431 2.256117 ACTCCCTCCGTTCACTTTTG 57.744 50.000 0.00 0.00 0.00 2.44
2379 2432 1.489230 ACTCCCTCCGTTCACTTTTGT 59.511 47.619 0.00 0.00 0.00 2.83
2380 2433 2.701951 ACTCCCTCCGTTCACTTTTGTA 59.298 45.455 0.00 0.00 0.00 2.41
2381 2434 3.135167 ACTCCCTCCGTTCACTTTTGTAA 59.865 43.478 0.00 0.00 0.00 2.41
2382 2435 3.735591 TCCCTCCGTTCACTTTTGTAAG 58.264 45.455 0.00 0.00 37.40 2.34
2383 2436 3.135167 TCCCTCCGTTCACTTTTGTAAGT 59.865 43.478 0.00 0.00 45.40 2.24
2384 2437 3.497262 CCCTCCGTTCACTTTTGTAAGTC 59.503 47.826 0.00 0.00 42.67 3.01
2385 2438 3.497262 CCTCCGTTCACTTTTGTAAGTCC 59.503 47.826 0.00 0.00 42.67 3.85
2386 2439 3.125316 TCCGTTCACTTTTGTAAGTCCG 58.875 45.455 0.00 0.00 42.67 4.79
2387 2440 2.867975 CCGTTCACTTTTGTAAGTCCGT 59.132 45.455 0.00 0.00 42.67 4.69
2388 2441 3.310501 CCGTTCACTTTTGTAAGTCCGTT 59.689 43.478 0.00 0.00 42.67 4.44
2389 2442 4.201841 CCGTTCACTTTTGTAAGTCCGTTT 60.202 41.667 0.00 0.00 42.67 3.60
2390 2443 5.006552 CCGTTCACTTTTGTAAGTCCGTTTA 59.993 40.000 0.00 0.00 42.67 2.01
2391 2444 6.124759 CGTTCACTTTTGTAAGTCCGTTTAG 58.875 40.000 0.00 0.00 42.67 1.85
2392 2445 6.019640 CGTTCACTTTTGTAAGTCCGTTTAGA 60.020 38.462 0.00 0.00 42.67 2.10
2393 2446 6.833342 TCACTTTTGTAAGTCCGTTTAGAC 57.167 37.500 0.00 0.00 42.67 2.59
2394 2447 6.339730 TCACTTTTGTAAGTCCGTTTAGACA 58.660 36.000 0.00 0.00 42.67 3.41
2395 2448 6.987992 TCACTTTTGTAAGTCCGTTTAGACAT 59.012 34.615 0.00 0.00 42.67 3.06
2396 2449 7.496591 TCACTTTTGTAAGTCCGTTTAGACATT 59.503 33.333 0.00 0.00 42.67 2.71
2397 2450 8.126700 CACTTTTGTAAGTCCGTTTAGACATTT 58.873 33.333 0.00 0.00 42.67 2.32
2398 2451 9.328845 ACTTTTGTAAGTCCGTTTAGACATTTA 57.671 29.630 0.00 0.00 40.60 1.40
2401 2454 9.545105 TTTGTAAGTCCGTTTAGACATTTAAGA 57.455 29.630 0.00 0.00 39.34 2.10
2402 2455 8.524870 TGTAAGTCCGTTTAGACATTTAAGAC 57.475 34.615 0.00 0.00 39.34 3.01
2403 2456 8.143193 TGTAAGTCCGTTTAGACATTTAAGACA 58.857 33.333 0.00 0.00 39.34 3.41
2404 2457 8.981647 GTAAGTCCGTTTAGACATTTAAGACAA 58.018 33.333 0.00 0.00 39.34 3.18
2405 2458 7.417496 AGTCCGTTTAGACATTTAAGACAAC 57.583 36.000 0.00 0.00 39.34 3.32
2406 2459 6.987992 AGTCCGTTTAGACATTTAAGACAACA 59.012 34.615 0.00 0.00 39.34 3.33
2407 2460 7.042254 AGTCCGTTTAGACATTTAAGACAACAC 60.042 37.037 0.00 0.00 39.34 3.32
2408 2461 6.203338 TCCGTTTAGACATTTAAGACAACACC 59.797 38.462 0.00 0.00 0.00 4.16
2409 2462 6.368213 CGTTTAGACATTTAAGACAACACCC 58.632 40.000 0.00 0.00 0.00 4.61
2410 2463 6.017770 CGTTTAGACATTTAAGACAACACCCA 60.018 38.462 0.00 0.00 0.00 4.51
2411 2464 7.467539 CGTTTAGACATTTAAGACAACACCCAA 60.468 37.037 0.00 0.00 0.00 4.12
2412 2465 7.883391 TTAGACATTTAAGACAACACCCAAA 57.117 32.000 0.00 0.00 0.00 3.28
2413 2466 6.783708 AGACATTTAAGACAACACCCAAAA 57.216 33.333 0.00 0.00 0.00 2.44
2414 2467 6.569780 AGACATTTAAGACAACACCCAAAAC 58.430 36.000 0.00 0.00 0.00 2.43
2415 2468 6.153680 AGACATTTAAGACAACACCCAAAACA 59.846 34.615 0.00 0.00 0.00 2.83
2416 2469 6.337356 ACATTTAAGACAACACCCAAAACAG 58.663 36.000 0.00 0.00 0.00 3.16
2417 2470 5.986501 TTTAAGACAACACCCAAAACAGT 57.013 34.783 0.00 0.00 0.00 3.55
2418 2471 5.986501 TTAAGACAACACCCAAAACAGTT 57.013 34.783 0.00 0.00 0.00 3.16
2419 2472 4.450082 AAGACAACACCCAAAACAGTTC 57.550 40.909 0.00 0.00 0.00 3.01
2420 2473 3.426615 AGACAACACCCAAAACAGTTCA 58.573 40.909 0.00 0.00 0.00 3.18
2421 2474 3.829601 AGACAACACCCAAAACAGTTCAA 59.170 39.130 0.00 0.00 0.00 2.69
2422 2475 4.466015 AGACAACACCCAAAACAGTTCAAT 59.534 37.500 0.00 0.00 0.00 2.57
2423 2476 5.046663 AGACAACACCCAAAACAGTTCAATT 60.047 36.000 0.00 0.00 0.00 2.32
2424 2477 5.555966 ACAACACCCAAAACAGTTCAATTT 58.444 33.333 0.00 0.00 0.00 1.82
2425 2478 5.641636 ACAACACCCAAAACAGTTCAATTTC 59.358 36.000 0.00 0.00 0.00 2.17
2426 2479 5.675684 ACACCCAAAACAGTTCAATTTCT 57.324 34.783 0.00 0.00 0.00 2.52
2427 2480 6.783708 ACACCCAAAACAGTTCAATTTCTA 57.216 33.333 0.00 0.00 0.00 2.10
2428 2481 6.569780 ACACCCAAAACAGTTCAATTTCTAC 58.430 36.000 0.00 0.00 0.00 2.59
2429 2482 6.379988 ACACCCAAAACAGTTCAATTTCTACT 59.620 34.615 0.00 0.00 0.00 2.57
2430 2483 6.697019 CACCCAAAACAGTTCAATTTCTACTG 59.303 38.462 8.91 8.91 43.72 2.74
2453 2506 9.391006 ACTGTCTAAAATGTCTTACAAAAGTGA 57.609 29.630 0.00 0.00 34.13 3.41
2455 2508 9.997482 TGTCTAAAATGTCTTACAAAAGTGAAC 57.003 29.630 0.00 0.00 34.13 3.18
2456 2509 9.997482 GTCTAAAATGTCTTACAAAAGTGAACA 57.003 29.630 0.00 0.00 34.13 3.18
2460 2513 6.867662 ATGTCTTACAAAAGTGAACAGAGG 57.132 37.500 0.00 0.00 34.13 3.69
2461 2514 5.123227 TGTCTTACAAAAGTGAACAGAGGG 58.877 41.667 0.00 0.00 34.13 4.30
2462 2515 5.104693 TGTCTTACAAAAGTGAACAGAGGGA 60.105 40.000 0.00 0.00 34.13 4.20
2463 2516 5.467063 GTCTTACAAAAGTGAACAGAGGGAG 59.533 44.000 0.00 0.00 34.13 4.30
2501 2554 7.630082 ACTTAAGGCACTATGGTTTATCAGAA 58.370 34.615 7.53 0.00 38.49 3.02
2592 2648 8.848182 TGGTTAAACATTTCCATACTTTAACGT 58.152 29.630 0.00 0.00 37.82 3.99
2716 2773 0.390866 CAGGTGAGCTCATCGCAACT 60.391 55.000 21.47 1.08 43.56 3.16
3345 3418 6.716628 AGTGATGGGTACATGCATAAATAAGG 59.283 38.462 0.00 0.00 37.47 2.69
3346 3419 6.009589 TGATGGGTACATGCATAAATAAGGG 58.990 40.000 0.00 0.00 37.47 3.95
3347 3420 4.735369 TGGGTACATGCATAAATAAGGGG 58.265 43.478 0.00 0.00 0.00 4.79
3348 3421 4.086457 GGGTACATGCATAAATAAGGGGG 58.914 47.826 0.00 0.00 0.00 5.40
3349 3422 4.448640 GGGTACATGCATAAATAAGGGGGT 60.449 45.833 0.00 0.00 0.00 4.95
3350 3423 4.522789 GGTACATGCATAAATAAGGGGGTG 59.477 45.833 0.00 0.00 0.00 4.61
3351 3424 4.264373 ACATGCATAAATAAGGGGGTGT 57.736 40.909 0.00 0.00 0.00 4.16
3352 3425 4.619679 ACATGCATAAATAAGGGGGTGTT 58.380 39.130 0.00 0.00 0.00 3.32
3353 3426 4.649218 ACATGCATAAATAAGGGGGTGTTC 59.351 41.667 0.00 0.00 0.00 3.18
3354 3427 3.283751 TGCATAAATAAGGGGGTGTTCG 58.716 45.455 0.00 0.00 0.00 3.95
3355 3428 2.621526 GCATAAATAAGGGGGTGTTCGG 59.378 50.000 0.00 0.00 0.00 4.30
3356 3429 3.219281 CATAAATAAGGGGGTGTTCGGG 58.781 50.000 0.00 0.00 0.00 5.14
3357 3430 1.374572 AAATAAGGGGGTGTTCGGGA 58.625 50.000 0.00 0.00 0.00 5.14
3358 3431 0.916809 AATAAGGGGGTGTTCGGGAG 59.083 55.000 0.00 0.00 0.00 4.30
3359 3432 1.632965 ATAAGGGGGTGTTCGGGAGC 61.633 60.000 0.00 0.00 0.00 4.70
3363 3436 4.097361 GGGTGTTCGGGAGCCCTC 62.097 72.222 3.70 0.00 38.12 4.30
3375 3448 3.394836 GCCCTCCGCTCCTCAACT 61.395 66.667 0.00 0.00 0.00 3.16
3376 3449 2.896443 CCCTCCGCTCCTCAACTC 59.104 66.667 0.00 0.00 0.00 3.01
3377 3450 2.726351 CCCTCCGCTCCTCAACTCC 61.726 68.421 0.00 0.00 0.00 3.85
3378 3451 2.492090 CTCCGCTCCTCAACTCCG 59.508 66.667 0.00 0.00 0.00 4.63
3379 3452 3.708220 CTCCGCTCCTCAACTCCGC 62.708 68.421 0.00 0.00 0.00 5.54
3380 3453 3.764466 CCGCTCCTCAACTCCGCT 61.764 66.667 0.00 0.00 0.00 5.52
3381 3454 2.415608 CCGCTCCTCAACTCCGCTA 61.416 63.158 0.00 0.00 0.00 4.26
3382 3455 1.226717 CGCTCCTCAACTCCGCTAC 60.227 63.158 0.00 0.00 0.00 3.58
3383 3456 1.226717 GCTCCTCAACTCCGCTACG 60.227 63.158 0.00 0.00 0.00 3.51
3416 3489 3.335534 GCACCGAACGCGTCAACT 61.336 61.111 14.44 0.00 35.23 3.16
3417 3490 2.844146 CACCGAACGCGTCAACTC 59.156 61.111 14.44 5.19 35.23 3.01
3418 3491 2.355481 ACCGAACGCGTCAACTCC 60.355 61.111 14.44 0.00 35.23 3.85
3419 3492 3.467119 CCGAACGCGTCAACTCCG 61.467 66.667 14.44 9.50 35.23 4.63
3420 3493 2.728383 CGAACGCGTCAACTCCGT 60.728 61.111 14.44 0.00 36.68 4.69
3421 3494 1.440850 CGAACGCGTCAACTCCGTA 60.441 57.895 14.44 0.00 34.41 4.02
3422 3495 1.393597 CGAACGCGTCAACTCCGTAG 61.394 60.000 14.44 0.00 34.41 3.51
3423 3496 0.110056 GAACGCGTCAACTCCGTAGA 60.110 55.000 14.44 0.00 34.41 2.59
3424 3497 0.524862 AACGCGTCAACTCCGTAGAT 59.475 50.000 14.44 0.00 34.41 1.98
3425 3498 0.524862 ACGCGTCAACTCCGTAGATT 59.475 50.000 5.58 0.00 32.86 2.40
3426 3499 1.068055 ACGCGTCAACTCCGTAGATTT 60.068 47.619 5.58 0.00 32.86 2.17
3427 3500 1.582502 CGCGTCAACTCCGTAGATTTC 59.417 52.381 0.00 0.00 0.00 2.17
3428 3501 2.602878 GCGTCAACTCCGTAGATTTCA 58.397 47.619 0.00 0.00 0.00 2.69
3429 3502 3.187700 GCGTCAACTCCGTAGATTTCAT 58.812 45.455 0.00 0.00 0.00 2.57
3430 3503 4.357142 GCGTCAACTCCGTAGATTTCATA 58.643 43.478 0.00 0.00 0.00 2.15
3431 3504 4.802039 GCGTCAACTCCGTAGATTTCATAA 59.198 41.667 0.00 0.00 0.00 1.90
3432 3505 5.462398 GCGTCAACTCCGTAGATTTCATAAT 59.538 40.000 0.00 0.00 0.00 1.28
3433 3506 6.345882 GCGTCAACTCCGTAGATTTCATAATC 60.346 42.308 0.00 0.00 40.42 1.75
3442 3515 4.013267 AGATTTCATAATCTGGAGCGGG 57.987 45.455 0.00 0.00 46.76 6.13
3443 3516 2.638480 TTTCATAATCTGGAGCGGGG 57.362 50.000 0.00 0.00 0.00 5.73
3444 3517 0.108585 TTCATAATCTGGAGCGGGGC 59.891 55.000 0.00 0.00 0.00 5.80
3445 3518 1.669115 CATAATCTGGAGCGGGGCG 60.669 63.158 0.00 0.00 0.00 6.13
3446 3519 2.883828 ATAATCTGGAGCGGGGCGG 61.884 63.158 0.00 0.00 0.00 6.13
3458 3531 3.773404 GGGCGGCCCGTAGTACAA 61.773 66.667 24.63 0.00 32.13 2.41
3459 3532 2.265424 GGCGGCCCGTAGTACAAA 59.735 61.111 8.12 0.00 0.00 2.83
3460 3533 1.153309 GGCGGCCCGTAGTACAAAT 60.153 57.895 8.12 0.00 0.00 2.32
3461 3534 1.156034 GGCGGCCCGTAGTACAAATC 61.156 60.000 8.12 0.00 0.00 2.17
3462 3535 1.485032 GCGGCCCGTAGTACAAATCG 61.485 60.000 4.45 0.53 0.00 3.34
3463 3536 1.485032 CGGCCCGTAGTACAAATCGC 61.485 60.000 0.00 0.00 0.00 4.58
3464 3537 0.179092 GGCCCGTAGTACAAATCGCT 60.179 55.000 0.38 0.00 0.00 4.93
3465 3538 0.928229 GCCCGTAGTACAAATCGCTG 59.072 55.000 0.38 0.00 0.00 5.18
3466 3539 1.567504 CCCGTAGTACAAATCGCTGG 58.432 55.000 0.38 0.00 0.00 4.85
3467 3540 1.135527 CCCGTAGTACAAATCGCTGGA 59.864 52.381 0.38 0.00 0.00 3.86
3468 3541 2.460918 CCGTAGTACAAATCGCTGGAG 58.539 52.381 0.38 0.00 0.00 3.86
3469 3542 2.159282 CCGTAGTACAAATCGCTGGAGT 60.159 50.000 0.38 0.00 0.00 3.85
3470 3543 3.106672 CGTAGTACAAATCGCTGGAGTC 58.893 50.000 0.38 0.00 0.00 3.36
3471 3544 2.279582 AGTACAAATCGCTGGAGTCG 57.720 50.000 0.00 0.00 0.00 4.18
3472 3545 1.135083 AGTACAAATCGCTGGAGTCGG 60.135 52.381 0.00 0.00 0.00 4.79
3473 3546 0.174845 TACAAATCGCTGGAGTCGGG 59.825 55.000 0.00 0.00 0.00 5.14
3474 3547 1.218047 CAAATCGCTGGAGTCGGGA 59.782 57.895 0.00 0.00 0.00 5.14
3475 3548 0.391130 CAAATCGCTGGAGTCGGGAA 60.391 55.000 0.00 0.00 0.00 3.97
3476 3549 0.323629 AAATCGCTGGAGTCGGGAAA 59.676 50.000 0.00 0.00 0.00 3.13
3477 3550 0.108138 AATCGCTGGAGTCGGGAAAG 60.108 55.000 0.00 0.00 0.00 2.62
3478 3551 1.258445 ATCGCTGGAGTCGGGAAAGT 61.258 55.000 0.00 0.00 0.00 2.66
3479 3552 1.738099 CGCTGGAGTCGGGAAAGTG 60.738 63.158 0.00 0.00 0.00 3.16
3480 3553 1.671742 GCTGGAGTCGGGAAAGTGA 59.328 57.895 0.00 0.00 0.00 3.41
3481 3554 0.670854 GCTGGAGTCGGGAAAGTGAC 60.671 60.000 0.00 0.00 35.33 3.67
3482 3555 0.388649 CTGGAGTCGGGAAAGTGACG 60.389 60.000 0.00 0.00 40.05 4.35
3483 3556 1.737008 GGAGTCGGGAAAGTGACGC 60.737 63.158 0.00 0.00 40.05 5.19
3484 3557 1.289380 GAGTCGGGAAAGTGACGCT 59.711 57.895 0.00 0.00 40.05 5.07
3485 3558 0.733223 GAGTCGGGAAAGTGACGCTC 60.733 60.000 0.00 0.00 40.05 5.03
3486 3559 1.737008 GTCGGGAAAGTGACGCTCC 60.737 63.158 0.00 0.00 0.00 4.70
3487 3560 2.809601 CGGGAAAGTGACGCTCCG 60.810 66.667 0.81 0.81 0.00 4.63
3488 3561 3.119096 GGGAAAGTGACGCTCCGC 61.119 66.667 0.00 0.00 0.00 5.54
3507 3580 3.893763 CGCTCCGTCTCGATGCCT 61.894 66.667 0.00 0.00 0.00 4.75
3508 3581 2.496817 GCTCCGTCTCGATGCCTT 59.503 61.111 0.00 0.00 0.00 4.35
3509 3582 1.880340 GCTCCGTCTCGATGCCTTG 60.880 63.158 0.00 0.00 0.00 3.61
3510 3583 1.513158 CTCCGTCTCGATGCCTTGT 59.487 57.895 0.00 0.00 0.00 3.16
3511 3584 0.738975 CTCCGTCTCGATGCCTTGTA 59.261 55.000 0.00 0.00 0.00 2.41
3512 3585 0.454600 TCCGTCTCGATGCCTTGTAC 59.545 55.000 0.00 0.00 0.00 2.90
3513 3586 0.527817 CCGTCTCGATGCCTTGTACC 60.528 60.000 0.00 0.00 0.00 3.34
3514 3587 0.172578 CGTCTCGATGCCTTGTACCA 59.827 55.000 0.00 0.00 0.00 3.25
3515 3588 1.403647 CGTCTCGATGCCTTGTACCAA 60.404 52.381 0.00 0.00 0.00 3.67
3516 3589 2.738643 CGTCTCGATGCCTTGTACCAAT 60.739 50.000 0.00 0.00 0.00 3.16
3517 3590 3.270877 GTCTCGATGCCTTGTACCAATT 58.729 45.455 0.00 0.00 0.00 2.32
3518 3591 3.689649 GTCTCGATGCCTTGTACCAATTT 59.310 43.478 0.00 0.00 0.00 1.82
3519 3592 4.156008 GTCTCGATGCCTTGTACCAATTTT 59.844 41.667 0.00 0.00 0.00 1.82
3520 3593 4.764823 TCTCGATGCCTTGTACCAATTTTT 59.235 37.500 0.00 0.00 0.00 1.94
3521 3594 5.941058 TCTCGATGCCTTGTACCAATTTTTA 59.059 36.000 0.00 0.00 0.00 1.52
3522 3595 5.945155 TCGATGCCTTGTACCAATTTTTAC 58.055 37.500 0.00 0.00 0.00 2.01
3523 3596 5.099575 CGATGCCTTGTACCAATTTTTACC 58.900 41.667 0.00 0.00 0.00 2.85
3524 3597 5.336055 CGATGCCTTGTACCAATTTTTACCA 60.336 40.000 0.00 0.00 0.00 3.25
3525 3598 5.461032 TGCCTTGTACCAATTTTTACCAG 57.539 39.130 0.00 0.00 0.00 4.00
3526 3599 4.242475 GCCTTGTACCAATTTTTACCAGC 58.758 43.478 0.00 0.00 0.00 4.85
3527 3600 4.816392 CCTTGTACCAATTTTTACCAGCC 58.184 43.478 0.00 0.00 0.00 4.85
3528 3601 4.282195 CCTTGTACCAATTTTTACCAGCCA 59.718 41.667 0.00 0.00 0.00 4.75
3529 3602 4.857509 TGTACCAATTTTTACCAGCCAC 57.142 40.909 0.00 0.00 0.00 5.01
3530 3603 4.475345 TGTACCAATTTTTACCAGCCACT 58.525 39.130 0.00 0.00 0.00 4.00
3531 3604 4.896482 TGTACCAATTTTTACCAGCCACTT 59.104 37.500 0.00 0.00 0.00 3.16
3532 3605 6.069331 TGTACCAATTTTTACCAGCCACTTA 58.931 36.000 0.00 0.00 0.00 2.24
3533 3606 5.462530 ACCAATTTTTACCAGCCACTTAC 57.537 39.130 0.00 0.00 0.00 2.34
3534 3607 4.282449 ACCAATTTTTACCAGCCACTTACC 59.718 41.667 0.00 0.00 0.00 2.85
3535 3608 4.282195 CCAATTTTTACCAGCCACTTACCA 59.718 41.667 0.00 0.00 0.00 3.25
3536 3609 5.469479 CAATTTTTACCAGCCACTTACCAG 58.531 41.667 0.00 0.00 0.00 4.00
3537 3610 3.868619 TTTTACCAGCCACTTACCAGT 57.131 42.857 0.00 0.00 0.00 4.00
3538 3611 3.868619 TTTACCAGCCACTTACCAGTT 57.131 42.857 0.00 0.00 0.00 3.16
3539 3612 3.412237 TTACCAGCCACTTACCAGTTC 57.588 47.619 0.00 0.00 0.00 3.01
3540 3613 0.034896 ACCAGCCACTTACCAGTTCG 59.965 55.000 0.00 0.00 0.00 3.95
3541 3614 0.320374 CCAGCCACTTACCAGTTCGA 59.680 55.000 0.00 0.00 0.00 3.71
3542 3615 1.673033 CCAGCCACTTACCAGTTCGAG 60.673 57.143 0.00 0.00 0.00 4.04
3543 3616 1.272490 CAGCCACTTACCAGTTCGAGA 59.728 52.381 0.00 0.00 0.00 4.04
3544 3617 1.546476 AGCCACTTACCAGTTCGAGAG 59.454 52.381 0.00 0.00 0.00 3.20
3545 3618 1.544691 GCCACTTACCAGTTCGAGAGA 59.455 52.381 0.00 0.00 39.20 3.10
3567 3640 2.838637 AAACAGGAAACAGAACCCCA 57.161 45.000 0.00 0.00 0.00 4.96
3568 3641 2.067365 AACAGGAAACAGAACCCCAC 57.933 50.000 0.00 0.00 0.00 4.61
3569 3642 0.923358 ACAGGAAACAGAACCCCACA 59.077 50.000 0.00 0.00 0.00 4.17
3570 3643 1.286553 ACAGGAAACAGAACCCCACAA 59.713 47.619 0.00 0.00 0.00 3.33
3571 3644 2.291930 ACAGGAAACAGAACCCCACAAA 60.292 45.455 0.00 0.00 0.00 2.83
3572 3645 2.965147 CAGGAAACAGAACCCCACAAAT 59.035 45.455 0.00 0.00 0.00 2.32
3573 3646 3.005791 CAGGAAACAGAACCCCACAAATC 59.994 47.826 0.00 0.00 0.00 2.17
3574 3647 3.117131 AGGAAACAGAACCCCACAAATCT 60.117 43.478 0.00 0.00 0.00 2.40
3575 3648 3.255888 GGAAACAGAACCCCACAAATCTC 59.744 47.826 0.00 0.00 0.00 2.75
3576 3649 3.884037 AACAGAACCCCACAAATCTCT 57.116 42.857 0.00 0.00 0.00 3.10
3577 3650 3.425162 ACAGAACCCCACAAATCTCTC 57.575 47.619 0.00 0.00 0.00 3.20
3578 3651 2.289694 ACAGAACCCCACAAATCTCTCG 60.290 50.000 0.00 0.00 0.00 4.04
3579 3652 1.978580 AGAACCCCACAAATCTCTCGT 59.021 47.619 0.00 0.00 0.00 4.18
3580 3653 2.028020 AGAACCCCACAAATCTCTCGTC 60.028 50.000 0.00 0.00 0.00 4.20
3581 3654 0.613777 ACCCCACAAATCTCTCGTCC 59.386 55.000 0.00 0.00 0.00 4.79
3582 3655 0.905357 CCCCACAAATCTCTCGTCCT 59.095 55.000 0.00 0.00 0.00 3.85
3583 3656 2.108168 CCCCACAAATCTCTCGTCCTA 58.892 52.381 0.00 0.00 0.00 2.94
3584 3657 2.159085 CCCCACAAATCTCTCGTCCTAC 60.159 54.545 0.00 0.00 0.00 3.18
3585 3658 2.159085 CCCACAAATCTCTCGTCCTACC 60.159 54.545 0.00 0.00 0.00 3.18
3586 3659 2.159085 CCACAAATCTCTCGTCCTACCC 60.159 54.545 0.00 0.00 0.00 3.69
3587 3660 1.749634 ACAAATCTCTCGTCCTACCCG 59.250 52.381 0.00 0.00 0.00 5.28
3588 3661 0.745468 AAATCTCTCGTCCTACCCGC 59.255 55.000 0.00 0.00 0.00 6.13
3589 3662 0.106619 AATCTCTCGTCCTACCCGCT 60.107 55.000 0.00 0.00 0.00 5.52
3590 3663 0.106619 ATCTCTCGTCCTACCCGCTT 60.107 55.000 0.00 0.00 0.00 4.68
3591 3664 1.030488 TCTCTCGTCCTACCCGCTTG 61.030 60.000 0.00 0.00 0.00 4.01
3592 3665 2.202756 CTCGTCCTACCCGCTTGC 60.203 66.667 0.00 0.00 0.00 4.01
3593 3666 3.718210 CTCGTCCTACCCGCTTGCC 62.718 68.421 0.00 0.00 0.00 4.52
3594 3667 4.832608 CGTCCTACCCGCTTGCCC 62.833 72.222 0.00 0.00 0.00 5.36
3595 3668 4.484872 GTCCTACCCGCTTGCCCC 62.485 72.222 0.00 0.00 0.00 5.80
3598 3671 3.861797 CTACCCGCTTGCCCCGAT 61.862 66.667 0.00 0.00 0.00 4.18
3599 3672 3.400599 CTACCCGCTTGCCCCGATT 62.401 63.158 0.00 0.00 0.00 3.34
3600 3673 3.394635 TACCCGCTTGCCCCGATTC 62.395 63.158 0.00 0.00 0.00 2.52
3603 3676 4.489771 CGCTTGCCCCGATTCCCT 62.490 66.667 0.00 0.00 0.00 4.20
3604 3677 2.043953 GCTTGCCCCGATTCCCTT 60.044 61.111 0.00 0.00 0.00 3.95
3605 3678 2.121538 GCTTGCCCCGATTCCCTTC 61.122 63.158 0.00 0.00 0.00 3.46
3606 3679 1.453928 CTTGCCCCGATTCCCTTCC 60.454 63.158 0.00 0.00 0.00 3.46
3607 3680 1.926426 CTTGCCCCGATTCCCTTCCT 61.926 60.000 0.00 0.00 0.00 3.36
3608 3681 0.622154 TTGCCCCGATTCCCTTCCTA 60.622 55.000 0.00 0.00 0.00 2.94
3609 3682 1.342672 TGCCCCGATTCCCTTCCTAC 61.343 60.000 0.00 0.00 0.00 3.18
3610 3683 1.342672 GCCCCGATTCCCTTCCTACA 61.343 60.000 0.00 0.00 0.00 2.74
3611 3684 1.435256 CCCCGATTCCCTTCCTACAT 58.565 55.000 0.00 0.00 0.00 2.29
3612 3685 1.072331 CCCCGATTCCCTTCCTACATG 59.928 57.143 0.00 0.00 0.00 3.21
3613 3686 1.543429 CCCGATTCCCTTCCTACATGC 60.543 57.143 0.00 0.00 0.00 4.06
3614 3687 1.502231 CGATTCCCTTCCTACATGCG 58.498 55.000 0.00 0.00 0.00 4.73
3615 3688 1.230324 GATTCCCTTCCTACATGCGC 58.770 55.000 0.00 0.00 0.00 6.09
3616 3689 0.546122 ATTCCCTTCCTACATGCGCA 59.454 50.000 14.96 14.96 0.00 6.09
3617 3690 0.392461 TTCCCTTCCTACATGCGCAC 60.392 55.000 14.90 0.00 0.00 5.34
3618 3691 1.078497 CCCTTCCTACATGCGCACA 60.078 57.895 14.90 0.00 0.00 4.57
3619 3692 1.369091 CCCTTCCTACATGCGCACAC 61.369 60.000 14.90 0.00 0.00 3.82
3620 3693 1.695893 CCTTCCTACATGCGCACACG 61.696 60.000 14.90 7.06 44.07 4.49
3621 3694 1.005512 TTCCTACATGCGCACACGT 60.006 52.632 14.90 13.58 42.83 4.49
3622 3695 1.011968 TTCCTACATGCGCACACGTC 61.012 55.000 14.90 0.00 42.83 4.34
3623 3696 2.689183 CTACATGCGCACACGTCG 59.311 61.111 14.90 2.57 42.83 5.12
3624 3697 1.799916 CTACATGCGCACACGTCGA 60.800 57.895 14.90 0.00 42.83 4.20
3625 3698 1.341369 CTACATGCGCACACGTCGAA 61.341 55.000 14.90 0.00 42.83 3.71
3626 3699 1.341369 TACATGCGCACACGTCGAAG 61.341 55.000 14.90 0.00 42.83 3.79
3627 3700 2.049526 ATGCGCACACGTCGAAGA 60.050 55.556 14.90 0.00 42.83 2.87
3628 3701 2.088763 ATGCGCACACGTCGAAGAG 61.089 57.895 14.90 0.00 42.83 2.85
3629 3702 4.122515 GCGCACACGTCGAAGAGC 62.123 66.667 0.30 5.33 42.83 4.09
3630 3703 2.429236 CGCACACGTCGAAGAGCT 60.429 61.111 5.05 0.00 36.95 4.09
3631 3704 2.710971 CGCACACGTCGAAGAGCTG 61.711 63.158 5.05 0.00 36.95 4.24
3632 3705 2.375766 GCACACGTCGAAGAGCTGG 61.376 63.158 5.05 0.00 36.95 4.85
3633 3706 1.285950 CACACGTCGAAGAGCTGGA 59.714 57.895 5.05 0.00 36.95 3.86
3634 3707 0.730834 CACACGTCGAAGAGCTGGAG 60.731 60.000 5.05 0.00 36.95 3.86
3635 3708 1.173444 ACACGTCGAAGAGCTGGAGT 61.173 55.000 5.05 0.00 36.95 3.85
3636 3709 0.039074 CACGTCGAAGAGCTGGAGTT 60.039 55.000 5.05 0.00 36.95 3.01
3637 3710 0.039074 ACGTCGAAGAGCTGGAGTTG 60.039 55.000 5.05 0.00 36.95 3.16
3638 3711 0.734253 CGTCGAAGAGCTGGAGTTGG 60.734 60.000 0.00 0.00 36.95 3.77
3639 3712 1.016653 GTCGAAGAGCTGGAGTTGGC 61.017 60.000 0.00 0.00 36.95 4.52
3640 3713 1.188219 TCGAAGAGCTGGAGTTGGCT 61.188 55.000 0.00 0.00 41.88 4.75
3641 3714 1.018226 CGAAGAGCTGGAGTTGGCTG 61.018 60.000 0.00 0.00 39.05 4.85
3642 3715 1.303155 AAGAGCTGGAGTTGGCTGC 60.303 57.895 0.00 0.00 39.05 5.25
3643 3716 2.749441 GAGCTGGAGTTGGCTGCC 60.749 66.667 12.87 12.87 39.05 4.85
3644 3717 4.711949 AGCTGGAGTTGGCTGCCG 62.712 66.667 14.98 0.00 37.41 5.69
3645 3718 4.704833 GCTGGAGTTGGCTGCCGA 62.705 66.667 14.98 9.85 31.52 5.54
3646 3719 2.032528 CTGGAGTTGGCTGCCGAA 59.967 61.111 10.93 4.80 31.52 4.30
3647 3720 2.281484 TGGAGTTGGCTGCCGAAC 60.281 61.111 10.93 16.50 31.52 3.95
3648 3721 3.423154 GGAGTTGGCTGCCGAACG 61.423 66.667 10.93 0.00 0.00 3.95
3649 3722 2.665185 GAGTTGGCTGCCGAACGT 60.665 61.111 10.93 7.67 0.00 3.99
3650 3723 2.203153 AGTTGGCTGCCGAACGTT 60.203 55.556 10.93 0.00 0.00 3.99
3651 3724 1.782028 GAGTTGGCTGCCGAACGTTT 61.782 55.000 10.93 2.50 0.00 3.60
3652 3725 1.065109 GTTGGCTGCCGAACGTTTT 59.935 52.632 10.93 0.00 0.00 2.43
3653 3726 1.064946 TTGGCTGCCGAACGTTTTG 59.935 52.632 14.98 0.00 0.00 2.44
3654 3727 2.729491 GGCTGCCGAACGTTTTGC 60.729 61.111 1.35 14.04 0.00 3.68
3655 3728 2.025441 GCTGCCGAACGTTTTGCA 59.975 55.556 20.09 20.09 0.00 4.08
3656 3729 1.587613 GCTGCCGAACGTTTTGCAA 60.588 52.632 21.16 0.00 32.58 4.08
3657 3730 1.142778 GCTGCCGAACGTTTTGCAAA 61.143 50.000 21.16 8.05 32.58 3.68
3658 3731 1.272781 CTGCCGAACGTTTTGCAAAA 58.727 45.000 20.46 20.46 32.58 2.44
3659 3732 1.857837 CTGCCGAACGTTTTGCAAAAT 59.142 42.857 26.24 11.85 32.58 1.82
3660 3733 2.271800 TGCCGAACGTTTTGCAAAATT 58.728 38.095 26.24 17.71 0.00 1.82
3661 3734 2.282820 TGCCGAACGTTTTGCAAAATTC 59.717 40.909 26.24 23.07 0.00 2.17
3662 3735 2.538037 GCCGAACGTTTTGCAAAATTCT 59.462 40.909 26.24 13.86 0.00 2.40
3663 3736 3.731717 GCCGAACGTTTTGCAAAATTCTA 59.268 39.130 26.24 1.85 0.00 2.10
3664 3737 4.207429 GCCGAACGTTTTGCAAAATTCTAA 59.793 37.500 26.24 1.05 0.00 2.10
3665 3738 5.276442 GCCGAACGTTTTGCAAAATTCTAAA 60.276 36.000 26.24 0.26 0.00 1.85
3666 3739 6.697152 CCGAACGTTTTGCAAAATTCTAAAA 58.303 32.000 26.24 0.00 0.00 1.52
3667 3740 7.341446 CCGAACGTTTTGCAAAATTCTAAAAT 58.659 30.769 26.24 8.37 0.00 1.82
3668 3741 8.480853 CCGAACGTTTTGCAAAATTCTAAAATA 58.519 29.630 26.24 0.00 0.00 1.40
3671 3744 9.592720 AACGTTTTGCAAAATTCTAAAATATGC 57.407 25.926 26.24 8.73 37.89 3.14
3672 3745 8.768955 ACGTTTTGCAAAATTCTAAAATATGCA 58.231 25.926 26.24 0.00 41.91 3.96
3673 3746 9.591404 CGTTTTGCAAAATTCTAAAATATGCAA 57.409 25.926 26.24 14.87 45.87 4.08
3684 3757 8.506168 TTCTAAAATATGCAAGTAGAGTTGGG 57.494 34.615 0.00 0.00 0.00 4.12
3685 3758 7.857456 TCTAAAATATGCAAGTAGAGTTGGGA 58.143 34.615 0.00 0.00 0.00 4.37
3686 3759 7.987458 TCTAAAATATGCAAGTAGAGTTGGGAG 59.013 37.037 0.00 0.00 0.00 4.30
3687 3760 5.700402 AATATGCAAGTAGAGTTGGGAGT 57.300 39.130 0.00 0.00 0.00 3.85
3688 3761 5.700402 ATATGCAAGTAGAGTTGGGAGTT 57.300 39.130 0.00 0.00 0.00 3.01
3689 3762 3.126001 TGCAAGTAGAGTTGGGAGTTG 57.874 47.619 0.00 0.00 0.00 3.16
3690 3763 2.703536 TGCAAGTAGAGTTGGGAGTTGA 59.296 45.455 0.00 0.00 0.00 3.18
3691 3764 3.244215 TGCAAGTAGAGTTGGGAGTTGAG 60.244 47.826 0.00 0.00 0.00 3.02
3692 3765 3.006967 GCAAGTAGAGTTGGGAGTTGAGA 59.993 47.826 0.00 0.00 0.00 3.27
3693 3766 4.503296 GCAAGTAGAGTTGGGAGTTGAGAA 60.503 45.833 0.00 0.00 0.00 2.87
3694 3767 5.233988 CAAGTAGAGTTGGGAGTTGAGAAG 58.766 45.833 0.00 0.00 0.00 2.85
3695 3768 4.484912 AGTAGAGTTGGGAGTTGAGAAGT 58.515 43.478 0.00 0.00 0.00 3.01
3696 3769 5.642165 AGTAGAGTTGGGAGTTGAGAAGTA 58.358 41.667 0.00 0.00 0.00 2.24
3697 3770 6.075984 AGTAGAGTTGGGAGTTGAGAAGTAA 58.924 40.000 0.00 0.00 0.00 2.24
3698 3771 5.476091 AGAGTTGGGAGTTGAGAAGTAAG 57.524 43.478 0.00 0.00 0.00 2.34
3699 3772 4.284746 AGAGTTGGGAGTTGAGAAGTAAGG 59.715 45.833 0.00 0.00 0.00 2.69
3700 3773 4.232091 AGTTGGGAGTTGAGAAGTAAGGA 58.768 43.478 0.00 0.00 0.00 3.36
3701 3774 4.284746 AGTTGGGAGTTGAGAAGTAAGGAG 59.715 45.833 0.00 0.00 0.00 3.69
3702 3775 3.858135 TGGGAGTTGAGAAGTAAGGAGT 58.142 45.455 0.00 0.00 0.00 3.85
3703 3776 3.578716 TGGGAGTTGAGAAGTAAGGAGTG 59.421 47.826 0.00 0.00 0.00 3.51
3704 3777 3.055747 GGGAGTTGAGAAGTAAGGAGTGG 60.056 52.174 0.00 0.00 0.00 4.00
3705 3778 3.833070 GGAGTTGAGAAGTAAGGAGTGGA 59.167 47.826 0.00 0.00 0.00 4.02
3706 3779 4.081917 GGAGTTGAGAAGTAAGGAGTGGAG 60.082 50.000 0.00 0.00 0.00 3.86
3707 3780 4.484912 AGTTGAGAAGTAAGGAGTGGAGT 58.515 43.478 0.00 0.00 0.00 3.85
3708 3781 4.902448 AGTTGAGAAGTAAGGAGTGGAGTT 59.098 41.667 0.00 0.00 0.00 3.01
3709 3782 4.873746 TGAGAAGTAAGGAGTGGAGTTG 57.126 45.455 0.00 0.00 0.00 3.16
3710 3783 4.480115 TGAGAAGTAAGGAGTGGAGTTGA 58.520 43.478 0.00 0.00 0.00 3.18
3711 3784 4.524714 TGAGAAGTAAGGAGTGGAGTTGAG 59.475 45.833 0.00 0.00 0.00 3.02
3712 3785 4.742012 AGAAGTAAGGAGTGGAGTTGAGA 58.258 43.478 0.00 0.00 0.00 3.27
3713 3786 5.148502 AGAAGTAAGGAGTGGAGTTGAGAA 58.851 41.667 0.00 0.00 0.00 2.87
3714 3787 5.602978 AGAAGTAAGGAGTGGAGTTGAGAAA 59.397 40.000 0.00 0.00 0.00 2.52
3715 3788 6.271159 AGAAGTAAGGAGTGGAGTTGAGAAAT 59.729 38.462 0.00 0.00 0.00 2.17
3716 3789 6.441088 AGTAAGGAGTGGAGTTGAGAAATT 57.559 37.500 0.00 0.00 0.00 1.82
3717 3790 7.554959 AGTAAGGAGTGGAGTTGAGAAATTA 57.445 36.000 0.00 0.00 0.00 1.40
3718 3791 7.616313 AGTAAGGAGTGGAGTTGAGAAATTAG 58.384 38.462 0.00 0.00 0.00 1.73
3719 3792 6.688073 AAGGAGTGGAGTTGAGAAATTAGA 57.312 37.500 0.00 0.00 0.00 2.10
3720 3793 6.293004 AGGAGTGGAGTTGAGAAATTAGAG 57.707 41.667 0.00 0.00 0.00 2.43
3721 3794 5.188751 AGGAGTGGAGTTGAGAAATTAGAGG 59.811 44.000 0.00 0.00 0.00 3.69
3722 3795 5.187967 GGAGTGGAGTTGAGAAATTAGAGGA 59.812 44.000 0.00 0.00 0.00 3.71
3723 3796 6.293004 AGTGGAGTTGAGAAATTAGAGGAG 57.707 41.667 0.00 0.00 0.00 3.69
3724 3797 5.782845 AGTGGAGTTGAGAAATTAGAGGAGT 59.217 40.000 0.00 0.00 0.00 3.85
3725 3798 5.872070 GTGGAGTTGAGAAATTAGAGGAGTG 59.128 44.000 0.00 0.00 0.00 3.51
3726 3799 5.046304 TGGAGTTGAGAAATTAGAGGAGTGG 60.046 44.000 0.00 0.00 0.00 4.00
3727 3800 5.187967 GGAGTTGAGAAATTAGAGGAGTGGA 59.812 44.000 0.00 0.00 0.00 4.02
3728 3801 6.293004 AGTTGAGAAATTAGAGGAGTGGAG 57.707 41.667 0.00 0.00 0.00 3.86
3729 3802 5.782845 AGTTGAGAAATTAGAGGAGTGGAGT 59.217 40.000 0.00 0.00 0.00 3.85
3730 3803 5.667539 TGAGAAATTAGAGGAGTGGAGTG 57.332 43.478 0.00 0.00 0.00 3.51
3731 3804 5.087323 TGAGAAATTAGAGGAGTGGAGTGT 58.913 41.667 0.00 0.00 0.00 3.55
3732 3805 5.544176 TGAGAAATTAGAGGAGTGGAGTGTT 59.456 40.000 0.00 0.00 0.00 3.32
3733 3806 5.799213 AGAAATTAGAGGAGTGGAGTGTTG 58.201 41.667 0.00 0.00 0.00 3.33
3734 3807 3.618690 ATTAGAGGAGTGGAGTGTTGC 57.381 47.619 0.00 0.00 0.00 4.17
3735 3808 1.267121 TAGAGGAGTGGAGTGTTGCC 58.733 55.000 0.00 0.00 0.00 4.52
3736 3809 1.374758 GAGGAGTGGAGTGTTGCCG 60.375 63.158 0.00 0.00 0.00 5.69
3737 3810 1.816863 GAGGAGTGGAGTGTTGCCGA 61.817 60.000 0.00 0.00 0.00 5.54
3738 3811 1.070786 GGAGTGGAGTGTTGCCGAA 59.929 57.895 0.00 0.00 0.00 4.30
3739 3812 1.228657 GGAGTGGAGTGTTGCCGAAC 61.229 60.000 0.00 0.00 0.00 3.95
3740 3813 0.531974 GAGTGGAGTGTTGCCGAACA 60.532 55.000 0.00 0.00 39.88 3.18
3741 3814 0.532862 AGTGGAGTGTTGCCGAACAG 60.533 55.000 0.00 0.00 42.87 3.16
3742 3815 1.227823 TGGAGTGTTGCCGAACAGG 60.228 57.895 0.00 0.00 42.87 4.00
3845 3918 4.966965 TCTGGAGAGATGTCTTTACGTC 57.033 45.455 0.00 0.00 41.25 4.34
3885 3960 5.888982 AGAAGTCTGGTTGAACTTTAGGA 57.111 39.130 0.00 0.00 0.00 2.94
4270 4346 4.182693 AGTGCATGTGTCCATTCAAATG 57.817 40.909 0.00 0.00 36.45 2.32
4279 4355 5.476254 TGTGTCCATTCAAATGCATAGTCAA 59.524 36.000 0.00 0.00 35.08 3.18
4486 4563 6.841443 CAGTTGTAGAAGCTGGATTATCAG 57.159 41.667 0.00 0.00 37.79 2.90
4635 4722 2.475487 GTCGTAACTGCAAGGTCAACTC 59.525 50.000 0.00 0.00 39.30 3.01
4636 4723 2.101750 TCGTAACTGCAAGGTCAACTCA 59.898 45.455 0.00 0.00 39.30 3.41
4637 4724 2.221055 CGTAACTGCAAGGTCAACTCAC 59.779 50.000 0.00 0.00 39.30 3.51
4638 4725 1.680338 AACTGCAAGGTCAACTCACC 58.320 50.000 0.00 0.00 39.30 4.02
4639 4726 0.546122 ACTGCAAGGTCAACTCACCA 59.454 50.000 0.00 0.00 39.16 4.17
4640 4727 1.143684 ACTGCAAGGTCAACTCACCAT 59.856 47.619 0.00 0.00 39.16 3.55
4641 4728 1.538512 CTGCAAGGTCAACTCACCATG 59.461 52.381 0.00 0.00 39.16 3.66
4642 4729 1.133823 TGCAAGGTCAACTCACCATGT 60.134 47.619 0.00 0.00 37.44 3.21
4643 4730 1.537202 GCAAGGTCAACTCACCATGTC 59.463 52.381 0.00 0.00 37.44 3.06
4644 4731 1.800586 CAAGGTCAACTCACCATGTCG 59.199 52.381 0.00 0.00 39.16 4.35
4645 4732 1.338107 AGGTCAACTCACCATGTCGA 58.662 50.000 0.00 0.00 39.16 4.20
4646 4733 1.000955 AGGTCAACTCACCATGTCGAC 59.999 52.381 9.11 9.11 39.16 4.20
4647 4734 1.000955 GGTCAACTCACCATGTCGACT 59.999 52.381 17.92 0.00 36.32 4.18
4648 4735 2.230508 GGTCAACTCACCATGTCGACTA 59.769 50.000 17.92 3.52 36.32 2.59
4649 4736 3.502920 GTCAACTCACCATGTCGACTAG 58.497 50.000 17.92 8.91 0.00 2.57
4650 4737 3.057456 GTCAACTCACCATGTCGACTAGT 60.057 47.826 17.92 8.43 0.00 2.57
4651 4738 3.190744 TCAACTCACCATGTCGACTAGTC 59.809 47.826 17.92 13.18 0.00 2.59
4669 4756 2.846918 GACGAGTCGCAACTGCAC 59.153 61.111 13.59 0.00 42.21 4.57
4896 4997 1.002315 TGTATCAGCAGCAGCAACAGA 59.998 47.619 3.17 0.00 45.49 3.41
5108 5209 3.370978 TGAATTCGCGTCAAGAATCCTTC 59.629 43.478 5.77 0.00 37.34 3.46
5400 5501 6.233434 TGTTGTCTTCTTCATGCATCTTAGT 58.767 36.000 0.00 0.00 0.00 2.24
5405 5506 8.260114 TGTCTTCTTCATGCATCTTAGTCATAA 58.740 33.333 0.00 0.00 0.00 1.90
5418 5519 7.488187 TCTTAGTCATAATCTGCATTGCTTC 57.512 36.000 10.49 0.00 0.00 3.86
5533 5634 9.722056 GTGATTCAATAAGGTAGTGCAAATAAG 57.278 33.333 0.00 0.00 0.00 1.73
5626 5727 4.100529 GTGCCATCTCGTTTCATTTGATG 58.899 43.478 0.00 0.00 35.59 3.07
5680 5781 7.388437 TGGGAACAGTTACTCGTATATTTTGT 58.612 34.615 0.00 0.00 35.01 2.83
5742 5853 3.260632 TGTGAGTACATACATGCACTGGT 59.739 43.478 0.00 0.00 34.66 4.00
5819 5930 7.095270 AGAACGATACAACGTAGGAAGAAAAT 58.905 34.615 0.00 0.00 45.83 1.82
5820 5931 7.601508 AGAACGATACAACGTAGGAAGAAAATT 59.398 33.333 0.00 0.00 45.83 1.82
5821 5932 7.662604 ACGATACAACGTAGGAAGAAAATTT 57.337 32.000 0.00 0.00 44.72 1.82
5851 5964 2.346766 TATTCCAACATGCCATCGCT 57.653 45.000 0.00 0.00 35.36 4.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.223641 CGGGTGCTTATAGTTGTCGCTA 60.224 50.000 0.00 0.00 0.00 4.26
23 24 0.928229 CGGGTGCTTATAGTTGTCGC 59.072 55.000 0.00 0.00 0.00 5.19
41 42 8.424731 GGCTTTACAATAGTTTTGATTTGTTCG 58.575 33.333 0.00 0.00 34.39 3.95
72 73 4.286910 CGCAAAATTTCGGAGAAACTCAA 58.713 39.130 0.00 0.00 45.90 3.02
143 145 6.018262 GTGACCCATTTTTCCTTTTTGCTTAC 60.018 38.462 0.00 0.00 0.00 2.34
155 157 8.770438 TTGCTTATTTATGTGACCCATTTTTC 57.230 30.769 0.00 0.00 34.86 2.29
495 502 3.181530 CGTGTTCGTTGGAGCTAATCTTG 60.182 47.826 0.00 0.00 0.00 3.02
514 521 4.259810 CGCACTAATCCACAGTAATTCGTG 60.260 45.833 7.59 7.59 33.84 4.35
521 528 1.136305 GCCTCGCACTAATCCACAGTA 59.864 52.381 0.00 0.00 0.00 2.74
564 571 3.952628 GACTCTTCCAACCGCCCCG 62.953 68.421 0.00 0.00 0.00 5.73
605 612 3.420839 AGAAACAACCAAAACTGCGAG 57.579 42.857 0.00 0.00 0.00 5.03
610 617 4.082463 TCGCAGAAAGAAACAACCAAAACT 60.082 37.500 0.00 0.00 0.00 2.66
708 715 1.969256 CAATTGGACGAAGAAAACGCG 59.031 47.619 3.53 3.53 0.00 6.01
835 842 5.590530 ACAATTTTGCTTGTGTTCCTACA 57.409 34.783 0.00 0.00 37.93 2.74
888 897 1.869767 GCGGTCCAATTCATAGCTCTG 59.130 52.381 0.00 0.00 0.00 3.35
895 904 0.469917 ATCGAGGCGGTCCAATTCAT 59.530 50.000 0.00 0.00 33.74 2.57
916 925 5.756347 ACTAAACTAACACGAACTTGCATCA 59.244 36.000 0.00 0.00 0.00 3.07
1007 1016 4.130281 GGAGTTTCGCGTTCGCCG 62.130 66.667 5.77 7.08 40.40 6.46
1335 1344 1.004758 CCCTCCTCCCCCAATCTCA 59.995 63.158 0.00 0.00 0.00 3.27
1728 1744 3.069729 ACTCCCTGGCTATCATCGTTAAC 59.930 47.826 0.00 0.00 0.00 2.01
1864 1880 2.961062 AGAATTGCAAAACCAGCAGAGT 59.039 40.909 1.71 0.00 43.75 3.24
1880 1896 7.078228 GCTTTATCACGTTGAACTTCAGAATT 58.922 34.615 0.00 0.00 0.00 2.17
2031 2084 7.953005 TGTCATCTTGGCAATCCTTAAAATA 57.047 32.000 0.00 0.00 0.00 1.40
2058 2111 4.780815 CCCTCATGTTTCCTAAGTGCATA 58.219 43.478 0.00 0.00 0.00 3.14
2117 2170 2.171237 CCATCCTATCAGGTGTGAGCAA 59.829 50.000 0.00 0.00 35.66 3.91
2137 2190 8.240682 TGTGTGAAATAAGTACATATTTGCACC 58.759 33.333 25.28 20.16 37.19 5.01
2257 2310 9.219603 TGTCTGATTTAAGACTCATAAAGTTGG 57.780 33.333 5.97 0.00 45.69 3.77
2327 2380 5.129485 AGGTAGCTATGCAATTGTACTGTCT 59.871 40.000 7.40 1.61 0.00 3.41
2357 2410 3.064931 CAAAAGTGAACGGAGGGAGTAC 58.935 50.000 0.00 0.00 0.00 2.73
2358 2411 2.701951 ACAAAAGTGAACGGAGGGAGTA 59.298 45.455 0.00 0.00 0.00 2.59
2359 2412 1.489230 ACAAAAGTGAACGGAGGGAGT 59.511 47.619 0.00 0.00 0.00 3.85
2360 2413 2.256117 ACAAAAGTGAACGGAGGGAG 57.744 50.000 0.00 0.00 0.00 4.30
2361 2414 3.135167 ACTTACAAAAGTGAACGGAGGGA 59.865 43.478 0.00 0.00 44.40 4.20
2362 2415 3.473625 ACTTACAAAAGTGAACGGAGGG 58.526 45.455 0.00 0.00 44.40 4.30
2363 2416 3.497262 GGACTTACAAAAGTGAACGGAGG 59.503 47.826 0.00 0.00 46.09 4.30
2364 2417 3.183775 CGGACTTACAAAAGTGAACGGAG 59.816 47.826 0.00 0.00 46.09 4.63
2365 2418 3.125316 CGGACTTACAAAAGTGAACGGA 58.875 45.455 0.00 0.00 46.09 4.69
2366 2419 2.867975 ACGGACTTACAAAAGTGAACGG 59.132 45.455 0.00 0.00 46.09 4.44
2367 2420 4.525411 AACGGACTTACAAAAGTGAACG 57.475 40.909 0.00 1.23 46.09 3.95
2368 2421 7.121911 GTCTAAACGGACTTACAAAAGTGAAC 58.878 38.462 0.00 0.00 46.09 3.18
2369 2422 6.817641 TGTCTAAACGGACTTACAAAAGTGAA 59.182 34.615 0.00 0.00 46.09 3.18
2370 2423 6.339730 TGTCTAAACGGACTTACAAAAGTGA 58.660 36.000 0.00 0.00 46.09 3.41
2371 2424 6.592798 TGTCTAAACGGACTTACAAAAGTG 57.407 37.500 0.00 0.00 46.09 3.16
2375 2428 9.545105 TCTTAAATGTCTAAACGGACTTACAAA 57.455 29.630 0.00 0.00 37.16 2.83
2376 2429 8.981647 GTCTTAAATGTCTAAACGGACTTACAA 58.018 33.333 0.00 0.00 37.16 2.41
2377 2430 8.143193 TGTCTTAAATGTCTAAACGGACTTACA 58.857 33.333 0.00 0.00 37.16 2.41
2378 2431 8.524870 TGTCTTAAATGTCTAAACGGACTTAC 57.475 34.615 0.00 0.00 37.16 2.34
2379 2432 8.981647 GTTGTCTTAAATGTCTAAACGGACTTA 58.018 33.333 0.00 0.00 37.16 2.24
2380 2433 7.496591 TGTTGTCTTAAATGTCTAAACGGACTT 59.503 33.333 0.00 0.00 37.16 3.01
2381 2434 6.987992 TGTTGTCTTAAATGTCTAAACGGACT 59.012 34.615 0.00 0.00 37.16 3.85
2382 2435 7.067728 GTGTTGTCTTAAATGTCTAAACGGAC 58.932 38.462 0.00 0.00 36.81 4.79
2383 2436 6.203338 GGTGTTGTCTTAAATGTCTAAACGGA 59.797 38.462 0.00 0.00 0.00 4.69
2384 2437 6.368213 GGTGTTGTCTTAAATGTCTAAACGG 58.632 40.000 0.00 0.00 0.00 4.44
2385 2438 6.017770 TGGGTGTTGTCTTAAATGTCTAAACG 60.018 38.462 0.00 0.00 0.00 3.60
2386 2439 7.266922 TGGGTGTTGTCTTAAATGTCTAAAC 57.733 36.000 0.00 0.00 0.00 2.01
2387 2440 7.883391 TTGGGTGTTGTCTTAAATGTCTAAA 57.117 32.000 0.00 0.00 0.00 1.85
2388 2441 7.883391 TTTGGGTGTTGTCTTAAATGTCTAA 57.117 32.000 0.00 0.00 0.00 2.10
2389 2442 7.339721 TGTTTTGGGTGTTGTCTTAAATGTCTA 59.660 33.333 0.00 0.00 0.00 2.59
2390 2443 6.153680 TGTTTTGGGTGTTGTCTTAAATGTCT 59.846 34.615 0.00 0.00 0.00 3.41
2391 2444 6.334202 TGTTTTGGGTGTTGTCTTAAATGTC 58.666 36.000 0.00 0.00 0.00 3.06
2392 2445 6.071051 ACTGTTTTGGGTGTTGTCTTAAATGT 60.071 34.615 0.00 0.00 0.00 2.71
2393 2446 6.337356 ACTGTTTTGGGTGTTGTCTTAAATG 58.663 36.000 0.00 0.00 0.00 2.32
2394 2447 6.538945 ACTGTTTTGGGTGTTGTCTTAAAT 57.461 33.333 0.00 0.00 0.00 1.40
2395 2448 5.986501 ACTGTTTTGGGTGTTGTCTTAAA 57.013 34.783 0.00 0.00 0.00 1.52
2396 2449 5.477291 TGAACTGTTTTGGGTGTTGTCTTAA 59.523 36.000 0.00 0.00 0.00 1.85
2397 2450 5.010933 TGAACTGTTTTGGGTGTTGTCTTA 58.989 37.500 0.00 0.00 0.00 2.10
2398 2451 3.829601 TGAACTGTTTTGGGTGTTGTCTT 59.170 39.130 0.00 0.00 0.00 3.01
2399 2452 3.426615 TGAACTGTTTTGGGTGTTGTCT 58.573 40.909 0.00 0.00 0.00 3.41
2400 2453 3.859411 TGAACTGTTTTGGGTGTTGTC 57.141 42.857 0.00 0.00 0.00 3.18
2401 2454 4.817318 ATTGAACTGTTTTGGGTGTTGT 57.183 36.364 0.00 0.00 0.00 3.32
2402 2455 5.874261 AGAAATTGAACTGTTTTGGGTGTTG 59.126 36.000 0.00 0.00 0.00 3.33
2403 2456 6.048732 AGAAATTGAACTGTTTTGGGTGTT 57.951 33.333 0.00 0.00 0.00 3.32
2404 2457 5.675684 AGAAATTGAACTGTTTTGGGTGT 57.324 34.783 0.00 0.00 0.00 4.16
2405 2458 6.697019 CAGTAGAAATTGAACTGTTTTGGGTG 59.303 38.462 0.00 0.00 36.66 4.61
2406 2459 6.805713 CAGTAGAAATTGAACTGTTTTGGGT 58.194 36.000 0.00 0.00 36.66 4.51
2427 2480 9.391006 TCACTTTTGTAAGACATTTTAGACAGT 57.609 29.630 0.00 0.00 35.30 3.55
2429 2482 9.997482 GTTCACTTTTGTAAGACATTTTAGACA 57.003 29.630 0.00 0.00 35.30 3.41
2430 2483 9.997482 TGTTCACTTTTGTAAGACATTTTAGAC 57.003 29.630 0.00 0.00 35.30 2.59
2434 2487 8.190784 CCTCTGTTCACTTTTGTAAGACATTTT 58.809 33.333 0.00 0.00 35.30 1.82
2435 2488 7.201821 CCCTCTGTTCACTTTTGTAAGACATTT 60.202 37.037 0.00 0.00 35.30 2.32
2436 2489 6.263168 CCCTCTGTTCACTTTTGTAAGACATT 59.737 38.462 0.00 0.00 35.30 2.71
2437 2490 5.765182 CCCTCTGTTCACTTTTGTAAGACAT 59.235 40.000 0.00 0.00 35.30 3.06
2438 2491 5.104693 TCCCTCTGTTCACTTTTGTAAGACA 60.105 40.000 0.00 0.00 35.30 3.41
2439 2492 5.365619 TCCCTCTGTTCACTTTTGTAAGAC 58.634 41.667 0.00 0.00 35.30 3.01
2440 2493 5.130477 ACTCCCTCTGTTCACTTTTGTAAGA 59.870 40.000 0.00 0.00 35.30 2.10
2441 2494 5.368989 ACTCCCTCTGTTCACTTTTGTAAG 58.631 41.667 0.00 0.00 37.40 2.34
2442 2495 5.367945 ACTCCCTCTGTTCACTTTTGTAA 57.632 39.130 0.00 0.00 0.00 2.41
2443 2496 5.601313 ACTACTCCCTCTGTTCACTTTTGTA 59.399 40.000 0.00 0.00 0.00 2.41
2444 2497 3.933861 ACTCCCTCTGTTCACTTTTGT 57.066 42.857 0.00 0.00 0.00 2.83
2445 2498 4.962155 ACTACTCCCTCTGTTCACTTTTG 58.038 43.478 0.00 0.00 0.00 2.44
2446 2499 5.632034 AACTACTCCCTCTGTTCACTTTT 57.368 39.130 0.00 0.00 0.00 2.27
2447 2500 6.075984 TCTAACTACTCCCTCTGTTCACTTT 58.924 40.000 0.00 0.00 0.00 2.66
2448 2501 5.642165 TCTAACTACTCCCTCTGTTCACTT 58.358 41.667 0.00 0.00 0.00 3.16
2449 2502 5.258216 TCTAACTACTCCCTCTGTTCACT 57.742 43.478 0.00 0.00 0.00 3.41
2450 2503 6.334202 CAATCTAACTACTCCCTCTGTTCAC 58.666 44.000 0.00 0.00 0.00 3.18
2451 2504 5.422331 CCAATCTAACTACTCCCTCTGTTCA 59.578 44.000 0.00 0.00 0.00 3.18
2452 2505 5.657302 TCCAATCTAACTACTCCCTCTGTTC 59.343 44.000 0.00 0.00 0.00 3.18
2453 2506 5.422650 GTCCAATCTAACTACTCCCTCTGTT 59.577 44.000 0.00 0.00 0.00 3.16
2454 2507 4.957327 GTCCAATCTAACTACTCCCTCTGT 59.043 45.833 0.00 0.00 0.00 3.41
2455 2508 5.205056 AGTCCAATCTAACTACTCCCTCTG 58.795 45.833 0.00 0.00 0.00 3.35
2456 2509 5.475398 AGTCCAATCTAACTACTCCCTCT 57.525 43.478 0.00 0.00 0.00 3.69
2457 2510 7.201929 CCTTAAGTCCAATCTAACTACTCCCTC 60.202 44.444 0.97 0.00 0.00 4.30
2458 2511 6.612049 CCTTAAGTCCAATCTAACTACTCCCT 59.388 42.308 0.97 0.00 0.00 4.20
2459 2512 6.685873 GCCTTAAGTCCAATCTAACTACTCCC 60.686 46.154 0.97 0.00 0.00 4.30
2460 2513 6.127140 TGCCTTAAGTCCAATCTAACTACTCC 60.127 42.308 0.97 0.00 0.00 3.85
2461 2514 6.757478 GTGCCTTAAGTCCAATCTAACTACTC 59.243 42.308 0.97 0.00 0.00 2.59
2462 2515 6.440965 AGTGCCTTAAGTCCAATCTAACTACT 59.559 38.462 0.97 0.00 0.00 2.57
2463 2516 6.641474 AGTGCCTTAAGTCCAATCTAACTAC 58.359 40.000 0.97 0.00 0.00 2.73
2538 2594 6.610075 ATTACAACTTGCAGATTGGGAATT 57.390 33.333 14.44 0.00 0.00 2.17
2941 3004 5.495640 AGCAGAAGTCCAAAATAAGGAGAG 58.504 41.667 0.00 0.00 35.42 3.20
2945 3008 3.696548 GGGAGCAGAAGTCCAAAATAAGG 59.303 47.826 0.00 0.00 35.57 2.69
3009 3076 8.791327 TCACTGAAGAGTTGCATTTGAATATA 57.209 30.769 0.00 0.00 0.00 0.86
3010 3077 7.692460 TCACTGAAGAGTTGCATTTGAATAT 57.308 32.000 0.00 0.00 0.00 1.28
3346 3419 4.097361 GAGGGCTCCCGAACACCC 62.097 72.222 0.00 0.00 43.17 4.61
3347 3420 4.097361 GGAGGGCTCCCGAACACC 62.097 72.222 0.00 0.00 43.94 4.16
3358 3431 3.378399 GAGTTGAGGAGCGGAGGGC 62.378 68.421 0.00 0.00 44.05 5.19
3359 3432 2.726351 GGAGTTGAGGAGCGGAGGG 61.726 68.421 0.00 0.00 0.00 4.30
3360 3433 2.896443 GGAGTTGAGGAGCGGAGG 59.104 66.667 0.00 0.00 0.00 4.30
3361 3434 2.492090 CGGAGTTGAGGAGCGGAG 59.508 66.667 0.00 0.00 0.00 4.63
3362 3435 2.831894 TAGCGGAGTTGAGGAGCGGA 62.832 60.000 0.00 0.00 0.00 5.54
3363 3436 2.415608 TAGCGGAGTTGAGGAGCGG 61.416 63.158 0.00 0.00 0.00 5.52
3364 3437 1.226717 GTAGCGGAGTTGAGGAGCG 60.227 63.158 0.00 0.00 0.00 5.03
3365 3438 1.226717 CGTAGCGGAGTTGAGGAGC 60.227 63.158 0.00 0.00 0.00 4.70
3399 3472 3.277742 GAGTTGACGCGTTCGGTGC 62.278 63.158 15.53 0.00 40.69 5.01
3400 3473 2.654912 GGAGTTGACGCGTTCGGTG 61.655 63.158 15.53 0.00 40.69 4.94
3401 3474 2.355481 GGAGTTGACGCGTTCGGT 60.355 61.111 15.53 0.00 40.69 4.69
3402 3475 2.784957 TACGGAGTTGACGCGTTCGG 62.785 60.000 15.53 13.82 37.78 4.30
3403 3476 1.393597 CTACGGAGTTGACGCGTTCG 61.394 60.000 15.53 13.12 37.78 3.95
3404 3477 0.110056 TCTACGGAGTTGACGCGTTC 60.110 55.000 15.53 6.67 37.78 3.95
3405 3478 0.524862 ATCTACGGAGTTGACGCGTT 59.475 50.000 15.53 0.00 45.95 4.84
3406 3479 0.524862 AATCTACGGAGTTGACGCGT 59.475 50.000 13.85 13.85 45.95 6.01
3407 3480 1.582502 GAAATCTACGGAGTTGACGCG 59.417 52.381 3.53 3.53 45.95 6.01
3408 3481 2.602878 TGAAATCTACGGAGTTGACGC 58.397 47.619 0.00 0.00 45.95 5.19
3409 3482 7.095024 GATTATGAAATCTACGGAGTTGACG 57.905 40.000 0.00 0.00 45.95 4.35
3422 3495 3.077359 CCCCGCTCCAGATTATGAAATC 58.923 50.000 0.00 0.00 41.65 2.17
3423 3496 2.815589 GCCCCGCTCCAGATTATGAAAT 60.816 50.000 0.00 0.00 0.00 2.17
3424 3497 1.476833 GCCCCGCTCCAGATTATGAAA 60.477 52.381 0.00 0.00 0.00 2.69
3425 3498 0.108585 GCCCCGCTCCAGATTATGAA 59.891 55.000 0.00 0.00 0.00 2.57
3426 3499 1.754745 GCCCCGCTCCAGATTATGA 59.245 57.895 0.00 0.00 0.00 2.15
3427 3500 1.669115 CGCCCCGCTCCAGATTATG 60.669 63.158 0.00 0.00 0.00 1.90
3428 3501 2.743718 CGCCCCGCTCCAGATTAT 59.256 61.111 0.00 0.00 0.00 1.28
3429 3502 3.546543 CCGCCCCGCTCCAGATTA 61.547 66.667 0.00 0.00 0.00 1.75
3441 3514 2.598098 ATTTGTACTACGGGCCGCCC 62.598 60.000 28.71 19.64 41.09 6.13
3442 3515 1.153309 ATTTGTACTACGGGCCGCC 60.153 57.895 28.71 9.53 0.00 6.13
3443 3516 1.485032 CGATTTGTACTACGGGCCGC 61.485 60.000 28.71 10.02 0.00 6.53
3444 3517 1.485032 GCGATTTGTACTACGGGCCG 61.485 60.000 27.06 27.06 0.00 6.13
3445 3518 0.179092 AGCGATTTGTACTACGGGCC 60.179 55.000 0.00 0.00 0.00 5.80
3446 3519 0.928229 CAGCGATTTGTACTACGGGC 59.072 55.000 0.00 0.00 0.00 6.13
3447 3520 1.135527 TCCAGCGATTTGTACTACGGG 59.864 52.381 0.00 0.00 0.00 5.28
3448 3521 2.159282 ACTCCAGCGATTTGTACTACGG 60.159 50.000 0.00 0.00 0.00 4.02
3449 3522 3.106672 GACTCCAGCGATTTGTACTACG 58.893 50.000 0.00 0.00 0.00 3.51
3450 3523 3.106672 CGACTCCAGCGATTTGTACTAC 58.893 50.000 0.00 0.00 0.00 2.73
3451 3524 2.098607 CCGACTCCAGCGATTTGTACTA 59.901 50.000 0.00 0.00 0.00 1.82
3452 3525 1.135083 CCGACTCCAGCGATTTGTACT 60.135 52.381 0.00 0.00 0.00 2.73
3453 3526 1.278238 CCGACTCCAGCGATTTGTAC 58.722 55.000 0.00 0.00 0.00 2.90
3454 3527 0.174845 CCCGACTCCAGCGATTTGTA 59.825 55.000 0.00 0.00 0.00 2.41
3455 3528 1.079127 CCCGACTCCAGCGATTTGT 60.079 57.895 0.00 0.00 0.00 2.83
3456 3529 0.391130 TTCCCGACTCCAGCGATTTG 60.391 55.000 0.00 0.00 0.00 2.32
3457 3530 0.323629 TTTCCCGACTCCAGCGATTT 59.676 50.000 0.00 0.00 0.00 2.17
3458 3531 0.108138 CTTTCCCGACTCCAGCGATT 60.108 55.000 0.00 0.00 0.00 3.34
3459 3532 1.258445 ACTTTCCCGACTCCAGCGAT 61.258 55.000 0.00 0.00 0.00 4.58
3460 3533 1.906824 ACTTTCCCGACTCCAGCGA 60.907 57.895 0.00 0.00 0.00 4.93
3461 3534 1.738099 CACTTTCCCGACTCCAGCG 60.738 63.158 0.00 0.00 0.00 5.18
3462 3535 0.670854 GTCACTTTCCCGACTCCAGC 60.671 60.000 0.00 0.00 0.00 4.85
3463 3536 0.388649 CGTCACTTTCCCGACTCCAG 60.389 60.000 0.00 0.00 0.00 3.86
3464 3537 1.663739 CGTCACTTTCCCGACTCCA 59.336 57.895 0.00 0.00 0.00 3.86
3465 3538 1.737008 GCGTCACTTTCCCGACTCC 60.737 63.158 0.00 0.00 0.00 3.85
3466 3539 0.733223 GAGCGTCACTTTCCCGACTC 60.733 60.000 0.00 0.00 0.00 3.36
3467 3540 1.289380 GAGCGTCACTTTCCCGACT 59.711 57.895 0.00 0.00 0.00 4.18
3468 3541 1.737008 GGAGCGTCACTTTCCCGAC 60.737 63.158 0.00 0.00 0.00 4.79
3469 3542 2.654877 GGAGCGTCACTTTCCCGA 59.345 61.111 0.00 0.00 0.00 5.14
3470 3543 2.809601 CGGAGCGTCACTTTCCCG 60.810 66.667 0.00 0.00 0.00 5.14
3490 3563 3.417275 AAGGCATCGAGACGGAGCG 62.417 63.158 0.00 0.00 0.00 5.03
3491 3564 1.880340 CAAGGCATCGAGACGGAGC 60.880 63.158 0.00 0.00 0.00 4.70
3492 3565 0.738975 TACAAGGCATCGAGACGGAG 59.261 55.000 0.00 0.00 0.00 4.63
3493 3566 0.454600 GTACAAGGCATCGAGACGGA 59.545 55.000 0.00 0.00 0.00 4.69
3494 3567 0.527817 GGTACAAGGCATCGAGACGG 60.528 60.000 0.00 0.00 0.00 4.79
3495 3568 0.172578 TGGTACAAGGCATCGAGACG 59.827 55.000 0.00 0.00 31.92 4.18
3508 3581 4.475345 AGTGGCTGGTAAAAATTGGTACA 58.525 39.130 0.00 0.00 0.00 2.90
3509 3582 5.462530 AAGTGGCTGGTAAAAATTGGTAC 57.537 39.130 0.00 0.00 0.00 3.34
3510 3583 5.477637 GGTAAGTGGCTGGTAAAAATTGGTA 59.522 40.000 0.00 0.00 0.00 3.25
3511 3584 4.282449 GGTAAGTGGCTGGTAAAAATTGGT 59.718 41.667 0.00 0.00 0.00 3.67
3512 3585 4.282195 TGGTAAGTGGCTGGTAAAAATTGG 59.718 41.667 0.00 0.00 0.00 3.16
3513 3586 5.010617 ACTGGTAAGTGGCTGGTAAAAATTG 59.989 40.000 0.00 0.00 34.48 2.32
3514 3587 5.144832 ACTGGTAAGTGGCTGGTAAAAATT 58.855 37.500 0.00 0.00 34.48 1.82
3515 3588 4.736473 ACTGGTAAGTGGCTGGTAAAAAT 58.264 39.130 0.00 0.00 34.48 1.82
3516 3589 4.173290 ACTGGTAAGTGGCTGGTAAAAA 57.827 40.909 0.00 0.00 34.48 1.94
3517 3590 3.868619 ACTGGTAAGTGGCTGGTAAAA 57.131 42.857 0.00 0.00 34.48 1.52
3518 3591 3.746940 GAACTGGTAAGTGGCTGGTAAA 58.253 45.455 0.00 0.00 36.51 2.01
3519 3592 2.289195 CGAACTGGTAAGTGGCTGGTAA 60.289 50.000 0.00 0.00 36.51 2.85
3520 3593 1.274167 CGAACTGGTAAGTGGCTGGTA 59.726 52.381 0.00 0.00 36.51 3.25
3521 3594 0.034896 CGAACTGGTAAGTGGCTGGT 59.965 55.000 0.00 0.00 36.51 4.00
3522 3595 0.320374 TCGAACTGGTAAGTGGCTGG 59.680 55.000 0.00 0.00 36.51 4.85
3523 3596 1.272490 TCTCGAACTGGTAAGTGGCTG 59.728 52.381 0.00 0.00 36.51 4.85
3524 3597 1.546476 CTCTCGAACTGGTAAGTGGCT 59.454 52.381 0.00 0.00 36.51 4.75
3525 3598 1.544691 TCTCTCGAACTGGTAAGTGGC 59.455 52.381 0.00 0.00 36.51 5.01
3526 3599 3.936372 TTCTCTCGAACTGGTAAGTGG 57.064 47.619 0.00 0.00 36.51 4.00
3546 3619 3.196901 GTGGGGTTCTGTTTCCTGTTTTT 59.803 43.478 0.00 0.00 0.00 1.94
3547 3620 2.764010 GTGGGGTTCTGTTTCCTGTTTT 59.236 45.455 0.00 0.00 0.00 2.43
3548 3621 2.291930 TGTGGGGTTCTGTTTCCTGTTT 60.292 45.455 0.00 0.00 0.00 2.83
3549 3622 1.286553 TGTGGGGTTCTGTTTCCTGTT 59.713 47.619 0.00 0.00 0.00 3.16
3550 3623 0.923358 TGTGGGGTTCTGTTTCCTGT 59.077 50.000 0.00 0.00 0.00 4.00
3551 3624 2.065899 TTGTGGGGTTCTGTTTCCTG 57.934 50.000 0.00 0.00 0.00 3.86
3552 3625 2.838637 TTTGTGGGGTTCTGTTTCCT 57.161 45.000 0.00 0.00 0.00 3.36
3553 3626 3.230976 AGATTTGTGGGGTTCTGTTTCC 58.769 45.455 0.00 0.00 0.00 3.13
3554 3627 4.145052 AGAGATTTGTGGGGTTCTGTTTC 58.855 43.478 0.00 0.00 0.00 2.78
3555 3628 4.145052 GAGAGATTTGTGGGGTTCTGTTT 58.855 43.478 0.00 0.00 0.00 2.83
3556 3629 3.756117 GAGAGATTTGTGGGGTTCTGTT 58.244 45.455 0.00 0.00 0.00 3.16
3557 3630 2.289694 CGAGAGATTTGTGGGGTTCTGT 60.290 50.000 0.00 0.00 0.00 3.41
3558 3631 2.289694 ACGAGAGATTTGTGGGGTTCTG 60.290 50.000 0.00 0.00 0.00 3.02
3559 3632 1.978580 ACGAGAGATTTGTGGGGTTCT 59.021 47.619 0.00 0.00 0.00 3.01
3560 3633 2.347731 GACGAGAGATTTGTGGGGTTC 58.652 52.381 0.00 0.00 0.00 3.62
3561 3634 1.003233 GGACGAGAGATTTGTGGGGTT 59.997 52.381 0.00 0.00 0.00 4.11
3562 3635 0.613777 GGACGAGAGATTTGTGGGGT 59.386 55.000 0.00 0.00 0.00 4.95
3563 3636 0.905357 AGGACGAGAGATTTGTGGGG 59.095 55.000 0.00 0.00 0.00 4.96
3564 3637 2.159085 GGTAGGACGAGAGATTTGTGGG 60.159 54.545 0.00 0.00 0.00 4.61
3565 3638 2.159085 GGGTAGGACGAGAGATTTGTGG 60.159 54.545 0.00 0.00 0.00 4.17
3566 3639 2.479730 CGGGTAGGACGAGAGATTTGTG 60.480 54.545 0.00 0.00 0.00 3.33
3567 3640 1.749634 CGGGTAGGACGAGAGATTTGT 59.250 52.381 0.00 0.00 0.00 2.83
3568 3641 1.536284 GCGGGTAGGACGAGAGATTTG 60.536 57.143 0.00 0.00 0.00 2.32
3569 3642 0.745468 GCGGGTAGGACGAGAGATTT 59.255 55.000 0.00 0.00 0.00 2.17
3570 3643 0.106619 AGCGGGTAGGACGAGAGATT 60.107 55.000 0.00 0.00 0.00 2.40
3571 3644 0.106619 AAGCGGGTAGGACGAGAGAT 60.107 55.000 0.00 0.00 0.00 2.75
3572 3645 1.030488 CAAGCGGGTAGGACGAGAGA 61.030 60.000 0.00 0.00 0.00 3.10
3573 3646 1.433879 CAAGCGGGTAGGACGAGAG 59.566 63.158 0.00 0.00 0.00 3.20
3574 3647 2.707849 GCAAGCGGGTAGGACGAGA 61.708 63.158 0.00 0.00 0.00 4.04
3575 3648 2.202756 GCAAGCGGGTAGGACGAG 60.203 66.667 0.00 0.00 0.00 4.18
3576 3649 3.766691 GGCAAGCGGGTAGGACGA 61.767 66.667 0.00 0.00 0.00 4.20
3577 3650 4.832608 GGGCAAGCGGGTAGGACG 62.833 72.222 0.00 0.00 0.00 4.79
3578 3651 4.484872 GGGGCAAGCGGGTAGGAC 62.485 72.222 0.00 0.00 0.00 3.85
3581 3654 3.400599 AATCGGGGCAAGCGGGTAG 62.401 63.158 0.00 0.00 0.00 3.18
3582 3655 3.394635 GAATCGGGGCAAGCGGGTA 62.395 63.158 0.00 0.00 0.00 3.69
3583 3656 4.796495 GAATCGGGGCAAGCGGGT 62.796 66.667 0.00 0.00 0.00 5.28
3586 3659 3.995506 AAGGGAATCGGGGCAAGCG 62.996 63.158 0.00 0.00 0.00 4.68
3587 3660 2.043953 AAGGGAATCGGGGCAAGC 60.044 61.111 0.00 0.00 0.00 4.01
3588 3661 1.453928 GGAAGGGAATCGGGGCAAG 60.454 63.158 0.00 0.00 0.00 4.01
3589 3662 0.622154 TAGGAAGGGAATCGGGGCAA 60.622 55.000 0.00 0.00 0.00 4.52
3590 3663 1.003704 TAGGAAGGGAATCGGGGCA 59.996 57.895 0.00 0.00 0.00 5.36
3591 3664 1.342672 TGTAGGAAGGGAATCGGGGC 61.343 60.000 0.00 0.00 0.00 5.80
3592 3665 1.072331 CATGTAGGAAGGGAATCGGGG 59.928 57.143 0.00 0.00 0.00 5.73
3593 3666 1.543429 GCATGTAGGAAGGGAATCGGG 60.543 57.143 0.00 0.00 0.00 5.14
3594 3667 1.873903 CGCATGTAGGAAGGGAATCGG 60.874 57.143 0.00 0.00 0.00 4.18
3595 3668 1.502231 CGCATGTAGGAAGGGAATCG 58.498 55.000 0.00 0.00 0.00 3.34
3596 3669 1.230324 GCGCATGTAGGAAGGGAATC 58.770 55.000 0.30 0.00 0.00 2.52
3597 3670 0.546122 TGCGCATGTAGGAAGGGAAT 59.454 50.000 5.66 0.00 0.00 3.01
3598 3671 0.392461 GTGCGCATGTAGGAAGGGAA 60.392 55.000 15.91 0.00 0.00 3.97
3599 3672 1.220749 GTGCGCATGTAGGAAGGGA 59.779 57.895 15.91 0.00 0.00 4.20
3600 3673 1.078497 TGTGCGCATGTAGGAAGGG 60.078 57.895 15.91 0.00 0.00 3.95
3601 3674 1.695893 CGTGTGCGCATGTAGGAAGG 61.696 60.000 15.91 0.00 0.00 3.46
3602 3675 1.014044 ACGTGTGCGCATGTAGGAAG 61.014 55.000 23.17 2.13 42.54 3.46
3603 3676 1.005512 ACGTGTGCGCATGTAGGAA 60.006 52.632 23.17 0.00 42.54 3.36
3604 3677 1.445410 GACGTGTGCGCATGTAGGA 60.445 57.895 24.35 0.00 44.20 2.94
3605 3678 2.788176 CGACGTGTGCGCATGTAGG 61.788 63.158 24.35 15.48 44.20 3.18
3606 3679 1.341369 TTCGACGTGTGCGCATGTAG 61.341 55.000 24.35 23.19 44.20 2.74
3607 3680 1.341369 CTTCGACGTGTGCGCATGTA 61.341 55.000 24.35 8.03 44.20 2.29
3608 3681 2.657757 CTTCGACGTGTGCGCATGT 61.658 57.895 24.53 24.53 46.58 3.21
3609 3682 2.094539 CTTCGACGTGTGCGCATG 59.905 61.111 15.91 17.81 42.83 4.06
3610 3683 2.049526 TCTTCGACGTGTGCGCAT 60.050 55.556 15.91 0.00 42.83 4.73
3611 3684 2.729491 CTCTTCGACGTGTGCGCA 60.729 61.111 5.66 5.66 42.83 6.09
3612 3685 4.122515 GCTCTTCGACGTGTGCGC 62.123 66.667 0.00 0.00 42.83 6.09
3613 3686 2.429236 AGCTCTTCGACGTGTGCG 60.429 61.111 0.00 0.00 44.93 5.34
3614 3687 2.375766 CCAGCTCTTCGACGTGTGC 61.376 63.158 0.00 2.43 0.00 4.57
3615 3688 0.730834 CTCCAGCTCTTCGACGTGTG 60.731 60.000 0.00 0.00 0.00 3.82
3616 3689 1.173444 ACTCCAGCTCTTCGACGTGT 61.173 55.000 0.00 0.00 0.00 4.49
3617 3690 0.039074 AACTCCAGCTCTTCGACGTG 60.039 55.000 0.00 0.00 0.00 4.49
3618 3691 0.039074 CAACTCCAGCTCTTCGACGT 60.039 55.000 0.00 0.00 0.00 4.34
3619 3692 0.734253 CCAACTCCAGCTCTTCGACG 60.734 60.000 0.00 0.00 0.00 5.12
3620 3693 1.016653 GCCAACTCCAGCTCTTCGAC 61.017 60.000 0.00 0.00 0.00 4.20
3621 3694 1.188219 AGCCAACTCCAGCTCTTCGA 61.188 55.000 0.00 0.00 32.71 3.71
3622 3695 1.018226 CAGCCAACTCCAGCTCTTCG 61.018 60.000 0.00 0.00 37.18 3.79
3623 3696 1.304509 GCAGCCAACTCCAGCTCTTC 61.305 60.000 0.00 0.00 37.18 2.87
3624 3697 1.303155 GCAGCCAACTCCAGCTCTT 60.303 57.895 0.00 0.00 37.18 2.85
3625 3698 2.350514 GCAGCCAACTCCAGCTCT 59.649 61.111 0.00 0.00 37.18 4.09
3626 3699 2.749441 GGCAGCCAACTCCAGCTC 60.749 66.667 6.55 0.00 37.18 4.09
3627 3700 4.711949 CGGCAGCCAACTCCAGCT 62.712 66.667 13.30 0.00 40.89 4.24
3628 3701 4.704833 TCGGCAGCCAACTCCAGC 62.705 66.667 13.30 0.00 0.00 4.85
3629 3702 2.032528 TTCGGCAGCCAACTCCAG 59.967 61.111 13.30 0.00 0.00 3.86
3630 3703 2.281484 GTTCGGCAGCCAACTCCA 60.281 61.111 13.30 0.00 0.00 3.86
3631 3704 3.423154 CGTTCGGCAGCCAACTCC 61.423 66.667 13.30 0.00 0.00 3.85
3632 3705 1.782028 AAACGTTCGGCAGCCAACTC 61.782 55.000 13.30 0.00 0.00 3.01
3633 3706 1.381165 AAAACGTTCGGCAGCCAACT 61.381 50.000 13.30 3.21 0.00 3.16
3634 3707 1.065109 AAAACGTTCGGCAGCCAAC 59.935 52.632 13.30 13.61 0.00 3.77
3635 3708 1.064946 CAAAACGTTCGGCAGCCAA 59.935 52.632 13.30 1.97 0.00 4.52
3636 3709 2.718731 CAAAACGTTCGGCAGCCA 59.281 55.556 13.30 0.00 0.00 4.75
3637 3710 2.729491 GCAAAACGTTCGGCAGCC 60.729 61.111 16.48 0.00 0.00 4.85
3638 3711 1.142778 TTTGCAAAACGTTCGGCAGC 61.143 50.000 21.16 12.92 37.59 5.25
3639 3712 1.272781 TTTTGCAAAACGTTCGGCAG 58.727 45.000 20.46 4.51 37.59 4.85
3640 3713 1.927895 ATTTTGCAAAACGTTCGGCA 58.072 40.000 26.05 19.19 0.00 5.69
3641 3714 2.538037 AGAATTTTGCAAAACGTTCGGC 59.462 40.909 26.05 15.01 0.00 5.54
3642 3715 5.874892 TTAGAATTTTGCAAAACGTTCGG 57.125 34.783 26.05 0.00 0.00 4.30
3645 3718 9.592720 GCATATTTTAGAATTTTGCAAAACGTT 57.407 25.926 26.05 17.44 35.21 3.99
3646 3719 8.768955 TGCATATTTTAGAATTTTGCAAAACGT 58.231 25.926 26.05 17.03 38.81 3.99
3647 3720 9.591404 TTGCATATTTTAGAATTTTGCAAAACG 57.409 25.926 26.05 5.19 43.05 3.60
3658 3731 9.125026 CCCAACTCTACTTGCATATTTTAGAAT 57.875 33.333 0.00 0.00 0.00 2.40
3659 3732 8.325787 TCCCAACTCTACTTGCATATTTTAGAA 58.674 33.333 0.00 0.00 0.00 2.10
3660 3733 7.857456 TCCCAACTCTACTTGCATATTTTAGA 58.143 34.615 0.00 0.00 0.00 2.10
3661 3734 7.770897 ACTCCCAACTCTACTTGCATATTTTAG 59.229 37.037 0.00 0.00 0.00 1.85
3662 3735 7.630082 ACTCCCAACTCTACTTGCATATTTTA 58.370 34.615 0.00 0.00 0.00 1.52
3663 3736 6.485171 ACTCCCAACTCTACTTGCATATTTT 58.515 36.000 0.00 0.00 0.00 1.82
3664 3737 6.067217 ACTCCCAACTCTACTTGCATATTT 57.933 37.500 0.00 0.00 0.00 1.40
3665 3738 5.700402 ACTCCCAACTCTACTTGCATATT 57.300 39.130 0.00 0.00 0.00 1.28
3666 3739 5.189736 TCAACTCCCAACTCTACTTGCATAT 59.810 40.000 0.00 0.00 0.00 1.78
3667 3740 4.530553 TCAACTCCCAACTCTACTTGCATA 59.469 41.667 0.00 0.00 0.00 3.14
3668 3741 3.327757 TCAACTCCCAACTCTACTTGCAT 59.672 43.478 0.00 0.00 0.00 3.96
3669 3742 2.703536 TCAACTCCCAACTCTACTTGCA 59.296 45.455 0.00 0.00 0.00 4.08
3670 3743 3.006967 TCTCAACTCCCAACTCTACTTGC 59.993 47.826 0.00 0.00 0.00 4.01
3671 3744 4.873746 TCTCAACTCCCAACTCTACTTG 57.126 45.455 0.00 0.00 0.00 3.16
3672 3745 4.902448 ACTTCTCAACTCCCAACTCTACTT 59.098 41.667 0.00 0.00 0.00 2.24
3673 3746 4.484912 ACTTCTCAACTCCCAACTCTACT 58.515 43.478 0.00 0.00 0.00 2.57
3674 3747 4.875561 ACTTCTCAACTCCCAACTCTAC 57.124 45.455 0.00 0.00 0.00 2.59
3675 3748 5.480772 CCTTACTTCTCAACTCCCAACTCTA 59.519 44.000 0.00 0.00 0.00 2.43
3676 3749 4.284746 CCTTACTTCTCAACTCCCAACTCT 59.715 45.833 0.00 0.00 0.00 3.24
3677 3750 4.283722 TCCTTACTTCTCAACTCCCAACTC 59.716 45.833 0.00 0.00 0.00 3.01
3678 3751 4.232091 TCCTTACTTCTCAACTCCCAACT 58.768 43.478 0.00 0.00 0.00 3.16
3679 3752 4.040584 ACTCCTTACTTCTCAACTCCCAAC 59.959 45.833 0.00 0.00 0.00 3.77
3680 3753 4.040461 CACTCCTTACTTCTCAACTCCCAA 59.960 45.833 0.00 0.00 0.00 4.12
3681 3754 3.578716 CACTCCTTACTTCTCAACTCCCA 59.421 47.826 0.00 0.00 0.00 4.37
3682 3755 3.055747 CCACTCCTTACTTCTCAACTCCC 60.056 52.174 0.00 0.00 0.00 4.30
3683 3756 3.833070 TCCACTCCTTACTTCTCAACTCC 59.167 47.826 0.00 0.00 0.00 3.85
3684 3757 4.525100 ACTCCACTCCTTACTTCTCAACTC 59.475 45.833 0.00 0.00 0.00 3.01
3685 3758 4.484912 ACTCCACTCCTTACTTCTCAACT 58.515 43.478 0.00 0.00 0.00 3.16
3686 3759 4.875561 ACTCCACTCCTTACTTCTCAAC 57.124 45.455 0.00 0.00 0.00 3.18
3687 3760 4.899457 TCAACTCCACTCCTTACTTCTCAA 59.101 41.667 0.00 0.00 0.00 3.02
3688 3761 4.480115 TCAACTCCACTCCTTACTTCTCA 58.520 43.478 0.00 0.00 0.00 3.27
3689 3762 4.767928 TCTCAACTCCACTCCTTACTTCTC 59.232 45.833 0.00 0.00 0.00 2.87
3690 3763 4.742012 TCTCAACTCCACTCCTTACTTCT 58.258 43.478 0.00 0.00 0.00 2.85
3691 3764 5.470047 TTCTCAACTCCACTCCTTACTTC 57.530 43.478 0.00 0.00 0.00 3.01
3692 3765 5.888982 TTTCTCAACTCCACTCCTTACTT 57.111 39.130 0.00 0.00 0.00 2.24
3693 3766 6.441088 AATTTCTCAACTCCACTCCTTACT 57.559 37.500 0.00 0.00 0.00 2.24
3694 3767 7.612677 TCTAATTTCTCAACTCCACTCCTTAC 58.387 38.462 0.00 0.00 0.00 2.34
3695 3768 7.093289 CCTCTAATTTCTCAACTCCACTCCTTA 60.093 40.741 0.00 0.00 0.00 2.69
3696 3769 6.296145 CCTCTAATTTCTCAACTCCACTCCTT 60.296 42.308 0.00 0.00 0.00 3.36
3697 3770 5.188751 CCTCTAATTTCTCAACTCCACTCCT 59.811 44.000 0.00 0.00 0.00 3.69
3698 3771 5.187967 TCCTCTAATTTCTCAACTCCACTCC 59.812 44.000 0.00 0.00 0.00 3.85
3699 3772 6.071051 ACTCCTCTAATTTCTCAACTCCACTC 60.071 42.308 0.00 0.00 0.00 3.51
3700 3773 5.782845 ACTCCTCTAATTTCTCAACTCCACT 59.217 40.000 0.00 0.00 0.00 4.00
3701 3774 5.872070 CACTCCTCTAATTTCTCAACTCCAC 59.128 44.000 0.00 0.00 0.00 4.02
3702 3775 5.046304 CCACTCCTCTAATTTCTCAACTCCA 60.046 44.000 0.00 0.00 0.00 3.86
3703 3776 5.187967 TCCACTCCTCTAATTTCTCAACTCC 59.812 44.000 0.00 0.00 0.00 3.85
3704 3777 6.071051 ACTCCACTCCTCTAATTTCTCAACTC 60.071 42.308 0.00 0.00 0.00 3.01
3705 3778 5.782845 ACTCCACTCCTCTAATTTCTCAACT 59.217 40.000 0.00 0.00 0.00 3.16
3706 3779 5.872070 CACTCCACTCCTCTAATTTCTCAAC 59.128 44.000 0.00 0.00 0.00 3.18
3707 3780 5.544176 ACACTCCACTCCTCTAATTTCTCAA 59.456 40.000 0.00 0.00 0.00 3.02
3708 3781 5.087323 ACACTCCACTCCTCTAATTTCTCA 58.913 41.667 0.00 0.00 0.00 3.27
3709 3782 5.669164 ACACTCCACTCCTCTAATTTCTC 57.331 43.478 0.00 0.00 0.00 2.87
3710 3783 5.799213 CAACACTCCACTCCTCTAATTTCT 58.201 41.667 0.00 0.00 0.00 2.52
3711 3784 4.393371 GCAACACTCCACTCCTCTAATTTC 59.607 45.833 0.00 0.00 0.00 2.17
3712 3785 4.327680 GCAACACTCCACTCCTCTAATTT 58.672 43.478 0.00 0.00 0.00 1.82
3713 3786 3.307762 GGCAACACTCCACTCCTCTAATT 60.308 47.826 0.00 0.00 0.00 1.40
3714 3787 2.237392 GGCAACACTCCACTCCTCTAAT 59.763 50.000 0.00 0.00 0.00 1.73
3715 3788 1.623811 GGCAACACTCCACTCCTCTAA 59.376 52.381 0.00 0.00 0.00 2.10
3716 3789 1.267121 GGCAACACTCCACTCCTCTA 58.733 55.000 0.00 0.00 0.00 2.43
3717 3790 1.821061 CGGCAACACTCCACTCCTCT 61.821 60.000 0.00 0.00 0.00 3.69
3718 3791 1.374758 CGGCAACACTCCACTCCTC 60.375 63.158 0.00 0.00 0.00 3.71
3719 3792 1.407656 TTCGGCAACACTCCACTCCT 61.408 55.000 0.00 0.00 0.00 3.69
3720 3793 1.070786 TTCGGCAACACTCCACTCC 59.929 57.895 0.00 0.00 0.00 3.85
3721 3794 0.531974 TGTTCGGCAACACTCCACTC 60.532 55.000 0.00 0.00 37.61 3.51
3722 3795 0.532862 CTGTTCGGCAACACTCCACT 60.533 55.000 0.00 0.00 37.61 4.00
3723 3796 1.507141 CCTGTTCGGCAACACTCCAC 61.507 60.000 0.00 0.00 37.61 4.02
3724 3797 1.227823 CCTGTTCGGCAACACTCCA 60.228 57.895 0.00 0.00 37.61 3.86
3725 3798 3.655481 CCTGTTCGGCAACACTCC 58.345 61.111 0.00 0.00 37.61 3.85
3734 3807 4.451629 TCTAAACTTAGAGCCTGTTCGG 57.548 45.455 0.00 0.00 34.99 4.30
3735 3808 6.969828 AATTCTAAACTTAGAGCCTGTTCG 57.030 37.500 0.00 0.00 40.57 3.95
3736 3809 9.004717 AGAAAATTCTAAACTTAGAGCCTGTTC 57.995 33.333 0.00 1.81 40.57 3.18
3737 3810 8.926092 AGAAAATTCTAAACTTAGAGCCTGTT 57.074 30.769 0.00 0.00 40.57 3.16
3885 3960 6.656902 TCAAACTTCTATGAGGATGCTTCAT 58.343 36.000 1.64 0.00 38.70 2.57
4279 4355 5.945784 ACATGAAATACAACCACTAGCATGT 59.054 36.000 0.00 0.00 38.99 3.21
4486 4563 5.239525 GGCACTGAGGTGGATTATGATAAAC 59.760 44.000 0.00 0.00 43.18 2.01
4611 4698 1.961394 TGACCTTGCAGTTACGACTCT 59.039 47.619 0.00 0.00 32.54 3.24
4652 4739 2.846918 GTGCAGTTGCGACTCGTC 59.153 61.111 2.72 0.00 45.83 4.20
4653 4740 3.030308 CGTGCAGTTGCGACTCGT 61.030 61.111 2.72 0.00 45.83 4.18
4654 4741 3.767230 CCGTGCAGTTGCGACTCG 61.767 66.667 2.72 5.13 45.83 4.18
4655 4742 2.658707 GACCGTGCAGTTGCGACTC 61.659 63.158 2.72 0.10 45.83 3.36
4669 4756 1.687628 GACTCTTGACAAGTCGACCG 58.312 55.000 13.01 6.48 34.33 4.79
4896 4997 0.115349 AGAGTAGGAGGCTGTGGTGT 59.885 55.000 0.00 0.00 0.00 4.16
5108 5209 3.359033 TCCTTTCCTGATGCATTCCTTG 58.641 45.455 0.00 0.00 0.00 3.61
5400 5501 4.190772 TGACGAAGCAATGCAGATTATGA 58.809 39.130 8.35 0.00 0.00 2.15
5405 5506 1.736126 CACTGACGAAGCAATGCAGAT 59.264 47.619 8.35 0.00 0.00 2.90
5418 5519 0.320683 TGCTCCACATTCCACTGACG 60.321 55.000 0.00 0.00 0.00 4.35
5461 5562 6.041409 TCTCAAGGATGTGGCACATTTAAAAA 59.959 34.615 31.83 15.95 44.52 1.94
5533 5634 5.940470 CCCAACTCTGGATAATGCTAATACC 59.060 44.000 0.00 0.00 46.92 2.73
5626 5727 7.761704 TGAGATAAATCTACTCACAAGAAGTGC 59.238 37.037 0.00 0.00 41.81 4.40
5742 5853 4.069232 CGCCCTCGTGAAGCTCCA 62.069 66.667 0.00 0.00 0.00 3.86
5819 5930 6.928492 GCATGTTGGAATAAGGTTTCTTCAAA 59.072 34.615 0.00 0.00 34.59 2.69
5820 5931 6.454795 GCATGTTGGAATAAGGTTTCTTCAA 58.545 36.000 0.00 0.00 34.59 2.69
5821 5932 5.047377 GGCATGTTGGAATAAGGTTTCTTCA 60.047 40.000 0.00 0.00 34.59 3.02
5851 5964 0.466543 ACAACGTCAAGGTGGTAGCA 59.533 50.000 0.00 0.00 43.31 3.49


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.