Multiple sequence alignment - TraesCS4D01G099000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G099000 chr4D 100.000 4062 0 0 1 4062 75789752 75785691 0.000000e+00 7502.0
1 TraesCS4D01G099000 chr4B 90.146 1989 108 22 2 1939 108357547 108355596 0.000000e+00 2507.0
2 TraesCS4D01G099000 chr4B 83.832 1070 81 43 2439 3447 108354728 108353690 0.000000e+00 933.0
3 TraesCS4D01G099000 chr4B 94.180 189 11 0 3646 3834 621703596 621703408 5.140000e-74 289.0
4 TraesCS4D01G099000 chr4B 93.889 180 8 2 3470 3649 108353516 108353340 6.690000e-68 268.0
5 TraesCS4D01G099000 chr4A 88.003 1242 56 41 752 1940 512028184 512026983 0.000000e+00 1382.0
6 TraesCS4D01G099000 chr4A 89.031 1094 71 28 2573 3643 512025778 512024711 0.000000e+00 1310.0
7 TraesCS4D01G099000 chr4A 83.051 118 18 2 2409 2525 512026384 512026268 5.550000e-19 106.0
8 TraesCS4D01G099000 chr5A 81.678 584 92 6 5 574 702566829 702567411 4.750000e-129 472.0
9 TraesCS4D01G099000 chr5A 95.767 189 8 0 3648 3836 448995857 448995669 5.100000e-79 305.0
10 TraesCS4D01G099000 chr3B 82.364 533 77 10 5 523 336966309 336965780 8.010000e-122 448.0
11 TraesCS4D01G099000 chr3D 96.739 184 6 0 3648 3831 532168918 532169101 1.420000e-79 307.0
12 TraesCS4D01G099000 chr3D 94.022 184 11 0 3648 3831 68388301 68388118 3.090000e-71 279.0
13 TraesCS4D01G099000 chr3D 92.708 192 11 3 3646 3836 605031169 605030980 1.440000e-69 274.0
14 TraesCS4D01G099000 chr2D 95.187 187 9 0 3648 3834 170450761 170450575 3.070000e-76 296.0
15 TraesCS4D01G099000 chr2D 82.456 342 48 9 1 330 516322649 516322990 5.140000e-74 289.0
16 TraesCS4D01G099000 chr2D 96.471 170 6 0 3648 3817 248684804 248684635 8.600000e-72 281.0
17 TraesCS4D01G099000 chr2D 92.500 160 10 2 3646 3804 633559827 633559669 1.140000e-55 228.0
18 TraesCS4D01G099000 chr2D 76.404 356 58 19 303 642 292294575 292294230 6.980000e-38 169.0
19 TraesCS4D01G099000 chr1D 97.093 172 5 0 3646 3817 319355623 319355452 1.430000e-74 291.0
20 TraesCS4D01G099000 chr1D 79.592 98 20 0 1 98 211649960 211650057 2.030000e-08 71.3
21 TraesCS4D01G099000 chr2B 77.539 512 91 16 122 617 368619016 368618513 1.850000e-73 287.0
22 TraesCS4D01G099000 chr7D 93.122 189 13 0 3646 3834 213517068 213517256 1.110000e-70 278.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G099000 chr4D 75785691 75789752 4061 True 7502.000000 7502 100.000 1 4062 1 chr4D.!!$R1 4061
1 TraesCS4D01G099000 chr4B 108353340 108357547 4207 True 1236.000000 2507 89.289 2 3649 3 chr4B.!!$R2 3647
2 TraesCS4D01G099000 chr4A 512024711 512028184 3473 True 932.666667 1382 86.695 752 3643 3 chr4A.!!$R1 2891
3 TraesCS4D01G099000 chr5A 702566829 702567411 582 False 472.000000 472 81.678 5 574 1 chr5A.!!$F1 569
4 TraesCS4D01G099000 chr3B 336965780 336966309 529 True 448.000000 448 82.364 5 523 1 chr3B.!!$R1 518
5 TraesCS4D01G099000 chr2B 368618513 368619016 503 True 287.000000 287 77.539 122 617 1 chr2B.!!$R1 495

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
980 1004 0.105224 CACACACGTAACACCCTCCA 59.895 55.0 0.0 0.0 0.0 3.86 F
1918 2012 0.031994 CAACAACCCAAAAGCTCCGG 59.968 55.0 0.0 0.0 0.0 5.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2734 3716 0.253347 AGAAAGGCCCAGGAGATCCA 60.253 55.0 0.0 0.0 38.89 3.41 R
3662 4854 0.107643 GCACCCCTCTAAGCATCTCC 59.892 60.0 0.0 0.0 0.00 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 1.741401 CCTTCGCGAGGTCATGCAA 60.741 57.895 17.52 0.00 40.95 4.08
45 46 1.302511 GAGGTCATGCAACGGTGGT 60.303 57.895 0.90 0.00 0.00 4.16
353 356 2.391724 GAAGTGGTGAACTCCGGCCA 62.392 60.000 2.24 0.00 38.56 5.36
459 475 5.180117 TCTGATTCTGCAACTGCTAAGTTTC 59.820 40.000 2.95 0.00 44.47 2.78
460 476 4.821260 TGATTCTGCAACTGCTAAGTTTCA 59.179 37.500 2.95 0.00 44.47 2.69
463 479 6.875948 TTCTGCAACTGCTAAGTTTCAATA 57.124 33.333 2.95 0.00 44.47 1.90
526 542 6.628919 AAATAGGGTATCCGTATTTGTTGC 57.371 37.500 19.04 0.00 46.24 4.17
537 553 4.261238 CCGTATTTGTTGCTTGTGGTTGTA 60.261 41.667 0.00 0.00 0.00 2.41
567 584 0.616371 TTGGGTATTGTCCGGACAGG 59.384 55.000 34.25 0.00 42.94 4.00
593 610 2.682494 ATACGCCCGGACACACCT 60.682 61.111 0.73 0.00 36.31 4.00
642 659 8.185506 TGGTGTTTCTTGTTGTAGATACTCTA 57.814 34.615 0.00 0.00 30.41 2.43
653 670 7.173735 TGTTGTAGATACTCTAAAGACGTGACA 59.826 37.037 0.00 0.00 29.58 3.58
707 726 2.159085 GCGGATACAGATGTATAGGGCC 60.159 54.545 5.49 0.00 40.99 5.80
715 734 3.261897 CAGATGTATAGGGCCTCGGATTT 59.738 47.826 10.74 0.00 0.00 2.17
716 735 3.261897 AGATGTATAGGGCCTCGGATTTG 59.738 47.826 10.74 0.00 0.00 2.32
717 736 1.071699 TGTATAGGGCCTCGGATTTGC 59.928 52.381 10.74 0.00 0.00 3.68
734 753 6.201044 CGGATTTGCTAACTATGGTTGTAGAG 59.799 42.308 4.47 0.00 36.92 2.43
740 759 4.744795 AACTATGGTTGTAGAGGCTCTG 57.255 45.455 26.95 9.10 33.96 3.35
746 765 0.710588 TTGTAGAGGCTCTGAGGGGA 59.289 55.000 26.95 2.42 0.00 4.81
784 803 3.810896 GGATCAACCGCGGCAACC 61.811 66.667 28.58 17.75 0.00 3.77
899 918 2.809601 GAGCACACCTACGCCGTG 60.810 66.667 0.00 0.00 37.26 4.94
940 960 0.790207 GCCTTTAAAGCCGCAAAAGC 59.210 50.000 9.86 1.66 0.00 3.51
973 997 0.252479 AACCCCACACACACGTAACA 59.748 50.000 0.00 0.00 0.00 2.41
975 999 1.161563 CCCCACACACACGTAACACC 61.162 60.000 0.00 0.00 0.00 4.16
977 1001 0.179067 CCACACACACGTAACACCCT 60.179 55.000 0.00 0.00 0.00 4.34
980 1004 0.105224 CACACACGTAACACCCTCCA 59.895 55.000 0.00 0.00 0.00 3.86
982 1006 0.105224 CACACGTAACACCCTCCACA 59.895 55.000 0.00 0.00 0.00 4.17
983 1007 0.105408 ACACGTAACACCCTCCACAC 59.895 55.000 0.00 0.00 0.00 3.82
984 1008 0.601841 CACGTAACACCCTCCACACC 60.602 60.000 0.00 0.00 0.00 4.16
985 1009 1.373748 CGTAACACCCTCCACACCG 60.374 63.158 0.00 0.00 0.00 4.94
1362 1435 4.273257 GCCGCCTACGAGCTCTCC 62.273 72.222 12.85 0.00 43.93 3.71
1420 1493 2.750350 CTCCTCCACCACCACCAC 59.250 66.667 0.00 0.00 0.00 4.16
1421 1494 2.852075 TCCTCCACCACCACCACC 60.852 66.667 0.00 0.00 0.00 4.61
1422 1495 3.174987 CCTCCACCACCACCACCA 61.175 66.667 0.00 0.00 0.00 4.17
1423 1496 2.113139 CTCCACCACCACCACCAC 59.887 66.667 0.00 0.00 0.00 4.16
1424 1497 3.491598 CTCCACCACCACCACCACC 62.492 68.421 0.00 0.00 0.00 4.61
1425 1498 3.814906 CCACCACCACCACCACCA 61.815 66.667 0.00 0.00 0.00 4.17
1426 1499 2.518349 CACCACCACCACCACCAC 60.518 66.667 0.00 0.00 0.00 4.16
1427 1500 3.816090 ACCACCACCACCACCACC 61.816 66.667 0.00 0.00 0.00 4.61
1428 1501 3.814906 CCACCACCACCACCACCA 61.815 66.667 0.00 0.00 0.00 4.17
1429 1502 2.518349 CACCACCACCACCACCAC 60.518 66.667 0.00 0.00 0.00 4.16
1430 1503 3.816090 ACCACCACCACCACCACC 61.816 66.667 0.00 0.00 0.00 4.61
1431 1504 3.814906 CCACCACCACCACCACCA 61.815 66.667 0.00 0.00 0.00 4.17
1432 1505 2.518349 CACCACCACCACCACCAC 60.518 66.667 0.00 0.00 0.00 4.16
1433 1506 3.816090 ACCACCACCACCACCACC 61.816 66.667 0.00 0.00 0.00 4.61
1434 1507 3.814906 CCACCACCACCACCACCA 61.815 66.667 0.00 0.00 0.00 4.17
1435 1508 2.518349 CACCACCACCACCACCAC 60.518 66.667 0.00 0.00 0.00 4.16
1436 1509 3.816090 ACCACCACCACCACCACC 61.816 66.667 0.00 0.00 0.00 4.61
1437 1510 3.814906 CCACCACCACCACCACCA 61.815 66.667 0.00 0.00 0.00 4.17
1877 1965 2.664851 CGCCAGCAGGAACAACGA 60.665 61.111 0.00 0.00 36.89 3.85
1878 1966 2.671177 CGCCAGCAGGAACAACGAG 61.671 63.158 0.00 0.00 36.89 4.18
1892 1986 5.105756 GGAACAACGAGATTGGAAATGGAAT 60.106 40.000 0.00 0.00 43.20 3.01
1901 1995 0.248843 GGAAATGGAATTGGCGGCAA 59.751 50.000 27.57 27.57 36.10 4.52
1903 1997 0.683973 AAATGGAATTGGCGGCAACA 59.316 45.000 27.95 20.36 36.10 3.33
1905 1999 0.037419 ATGGAATTGGCGGCAACAAC 60.037 50.000 27.95 18.85 0.00 3.32
1918 2012 0.031994 CAACAACCCAAAAGCTCCGG 59.968 55.000 0.00 0.00 0.00 5.14
1940 2034 2.838202 CCAGGAGTAGGAGCAGGTAAAA 59.162 50.000 0.00 0.00 0.00 1.52
1941 2035 3.263425 CCAGGAGTAGGAGCAGGTAAAAA 59.737 47.826 0.00 0.00 0.00 1.94
2078 2259 4.983671 ACACTGTTTTGGAAGAAGAACC 57.016 40.909 0.00 0.00 0.00 3.62
2082 2266 3.704061 CTGTTTTGGAAGAAGAACCCCAA 59.296 43.478 0.00 0.00 36.94 4.12
2158 2356 4.776795 TGAGTCAGCAAATACGTCAGTA 57.223 40.909 0.00 0.00 37.24 2.74
2180 2378 8.443160 CAGTATGAAAATTGTATGGTATAGGCG 58.557 37.037 0.00 0.00 39.69 5.52
2206 2405 5.139435 AGAGAAAGGCCAAAATTAAGTGC 57.861 39.130 5.01 0.00 0.00 4.40
2255 2454 3.733337 AGTGTGAAGTCATGACAGTTCC 58.267 45.455 27.02 15.63 0.00 3.62
2284 2483 0.589223 GATCGGTCAACACGGCAAAA 59.411 50.000 0.00 0.00 0.00 2.44
2317 2516 4.036262 TGGTTTGAAGTCCATCTTGTTTCG 59.964 41.667 0.00 0.00 36.40 3.46
2321 2534 5.209818 TGAAGTCCATCTTGTTTCGTAGT 57.790 39.130 0.00 0.00 36.40 2.73
2331 2544 7.545965 CCATCTTGTTTCGTAGTAGTCAATTCT 59.454 37.037 0.00 0.00 0.00 2.40
2344 2561 4.192317 AGTCAATTCTTTGTATCCGCCTC 58.808 43.478 0.00 0.00 34.32 4.70
2345 2562 4.080863 AGTCAATTCTTTGTATCCGCCTCT 60.081 41.667 0.00 0.00 34.32 3.69
2399 2616 7.941238 TGATCATTTTTCCAAGTCTTCTCTCTT 59.059 33.333 0.00 0.00 0.00 2.85
2411 2628 5.933463 AGTCTTCTCTCTTGCTTTCTCATTG 59.067 40.000 0.00 0.00 0.00 2.82
2484 2997 3.004944 GGGCTATTTGTTTTGTCGTGGAA 59.995 43.478 0.00 0.00 0.00 3.53
2526 3039 9.911788 ACTGTCTAATGGAATGTTCTGATTTAT 57.088 29.630 0.00 0.00 0.00 1.40
2556 3272 3.140325 TGCTCTCTTTTGAATTCCGGT 57.860 42.857 0.00 0.00 0.00 5.28
2564 3280 4.455533 TCTTTTGAATTCCGGTCATCACAG 59.544 41.667 0.00 3.71 0.00 3.66
2569 3285 3.526931 ATTCCGGTCATCACAGTACTG 57.473 47.619 21.44 21.44 0.00 2.74
2572 3522 3.893521 TCCGGTCATCACAGTACTGATA 58.106 45.455 29.30 16.06 29.28 2.15
2580 3535 7.237173 GTCATCACAGTACTGATAAAAAGTGC 58.763 38.462 29.30 5.72 29.28 4.40
2594 3549 2.051334 AAGTGCGGCTTGCCATATTA 57.949 45.000 12.45 0.00 45.60 0.98
2595 3550 2.276732 AGTGCGGCTTGCCATATTAT 57.723 45.000 12.45 0.00 45.60 1.28
2596 3551 2.586425 AGTGCGGCTTGCCATATTATT 58.414 42.857 12.45 0.00 45.60 1.40
2597 3552 3.750371 AGTGCGGCTTGCCATATTATTA 58.250 40.909 12.45 0.00 45.60 0.98
2673 3641 8.243426 TGTGATAAATCTTTGTAGGTTCATTGC 58.757 33.333 0.00 0.00 0.00 3.56
2682 3650 4.523083 TGTAGGTTCATTGCATAGGTTCC 58.477 43.478 0.00 0.00 0.00 3.62
2692 3660 2.969950 TGCATAGGTTCCGTATTAGGCT 59.030 45.455 0.00 0.00 0.00 4.58
2734 3716 8.405531 CCAATCACACCTAATTTACGATCAAAT 58.594 33.333 0.00 0.00 0.00 2.32
2807 3789 3.641031 AAAAACACAAGTCCAGCGC 57.359 47.368 0.00 0.00 0.00 5.92
2950 3941 9.559732 CATGACCTTGATCATACCAAACTATTA 57.440 33.333 0.00 0.00 37.20 0.98
2952 3943 9.778741 TGACCTTGATCATACCAAACTATTATC 57.221 33.333 0.00 0.00 0.00 1.75
3024 4015 1.674817 CGGGTGCTATGGTTTCTTCGT 60.675 52.381 0.00 0.00 0.00 3.85
3035 4026 2.098443 GGTTTCTTCGTGGCAAACAAGA 59.902 45.455 0.00 0.00 35.75 3.02
3053 4044 3.173953 AGAGCAAAAATGGGGTCATCA 57.826 42.857 0.00 0.00 34.11 3.07
3176 4204 3.056322 ACAAAAATGGAGCTCATGGAAGC 60.056 43.478 17.19 0.00 42.82 3.86
3199 4227 0.457853 GACTCGACGTGCATGCCTAA 60.458 55.000 16.68 0.00 0.00 2.69
3209 4237 1.617850 TGCATGCCTAAAAACTGGTGG 59.382 47.619 16.68 0.00 0.00 4.61
3263 4296 2.134354 TGGATACATCTTGCCCATGGA 58.866 47.619 15.22 0.00 46.17 3.41
3264 4297 2.107031 TGGATACATCTTGCCCATGGAG 59.893 50.000 15.22 2.37 46.17 3.86
3265 4298 2.373169 GGATACATCTTGCCCATGGAGA 59.627 50.000 15.22 8.90 0.00 3.71
3266 4299 3.009916 GGATACATCTTGCCCATGGAGAT 59.990 47.826 15.22 11.08 0.00 2.75
3267 4300 4.508047 GGATACATCTTGCCCATGGAGATT 60.508 45.833 15.22 7.41 0.00 2.40
3268 4301 2.662866 ACATCTTGCCCATGGAGATTG 58.337 47.619 15.22 10.64 0.00 2.67
3269 4302 1.340248 CATCTTGCCCATGGAGATTGC 59.660 52.381 15.22 8.28 0.00 3.56
3294 4327 5.191323 AGAGGACAGATGAGATCCAACAATT 59.809 40.000 0.00 0.00 34.73 2.32
3350 4383 9.822185 ATGTTGTGCTTCTTTCTCTTTATTTTT 57.178 25.926 0.00 0.00 0.00 1.94
3397 4430 7.612668 ATTTTCTCAGACAATCACATCTCTG 57.387 36.000 0.00 0.00 32.86 3.35
3406 4439 3.550437 ATCACATCTCTGGCTTGTACC 57.450 47.619 0.00 0.00 0.00 3.34
3412 4445 0.181350 CTCTGGCTTGTACCATCCCC 59.819 60.000 0.00 0.00 39.54 4.81
3456 4644 7.272037 ACAATCATTTCTTTTGTCGGTAGTT 57.728 32.000 0.00 0.00 0.00 2.24
3505 4694 4.517285 ACAAAATCGCAGATACTGTGGAT 58.483 39.130 11.46 6.94 45.12 3.41
3517 4706 2.592861 GTGGATGAGGATGCGCCC 60.593 66.667 4.18 0.00 37.37 6.13
3518 4707 3.089217 TGGATGAGGATGCGCCCA 61.089 61.111 4.18 0.00 37.37 5.36
3584 4776 4.061357 TGACACACGACTTACCAAATGA 57.939 40.909 0.00 0.00 0.00 2.57
3617 4809 3.667497 TGCGAAGATCCCATCAGATAC 57.333 47.619 0.00 0.00 0.00 2.24
3643 4835 3.002102 TGGTTAAAATACGGACGCCTTC 58.998 45.455 0.00 0.00 0.00 3.46
3658 4850 2.754946 CCTTCGTTAGGCCTTGTACA 57.245 50.000 12.58 0.00 37.17 2.90
3659 4851 3.048337 CCTTCGTTAGGCCTTGTACAA 57.952 47.619 12.58 8.28 37.17 2.41
3660 4852 3.606687 CCTTCGTTAGGCCTTGTACAAT 58.393 45.455 12.58 0.00 37.17 2.71
3661 4853 3.374058 CCTTCGTTAGGCCTTGTACAATG 59.626 47.826 12.58 7.68 37.17 2.82
3662 4854 2.980568 TCGTTAGGCCTTGTACAATGG 58.019 47.619 12.58 13.26 0.00 3.16
3663 4855 2.014128 CGTTAGGCCTTGTACAATGGG 58.986 52.381 12.58 14.91 0.00 4.00
3664 4856 2.355310 CGTTAGGCCTTGTACAATGGGA 60.355 50.000 12.58 0.00 0.00 4.37
3665 4857 3.279434 GTTAGGCCTTGTACAATGGGAG 58.721 50.000 12.58 1.65 0.00 4.30
3666 4858 1.668826 AGGCCTTGTACAATGGGAGA 58.331 50.000 16.08 0.00 0.00 3.71
3667 4859 2.208872 AGGCCTTGTACAATGGGAGAT 58.791 47.619 16.08 0.53 0.00 2.75
3668 4860 2.092212 AGGCCTTGTACAATGGGAGATG 60.092 50.000 16.08 0.00 0.00 2.90
3669 4861 1.678101 GCCTTGTACAATGGGAGATGC 59.322 52.381 16.08 3.76 0.00 3.91
3670 4862 2.684927 GCCTTGTACAATGGGAGATGCT 60.685 50.000 16.08 0.00 0.00 3.79
3671 4863 3.624777 CCTTGTACAATGGGAGATGCTT 58.375 45.455 9.13 0.00 0.00 3.91
3672 4864 4.780815 CCTTGTACAATGGGAGATGCTTA 58.219 43.478 9.13 0.00 0.00 3.09
3673 4865 4.818546 CCTTGTACAATGGGAGATGCTTAG 59.181 45.833 9.13 0.00 0.00 2.18
3674 4866 5.396772 CCTTGTACAATGGGAGATGCTTAGA 60.397 44.000 9.13 0.00 0.00 2.10
3675 4867 5.282055 TGTACAATGGGAGATGCTTAGAG 57.718 43.478 0.00 0.00 0.00 2.43
3676 4868 3.853355 ACAATGGGAGATGCTTAGAGG 57.147 47.619 0.00 0.00 0.00 3.69
3677 4869 2.441001 ACAATGGGAGATGCTTAGAGGG 59.559 50.000 0.00 0.00 0.00 4.30
3678 4870 1.739750 ATGGGAGATGCTTAGAGGGG 58.260 55.000 0.00 0.00 0.00 4.79
3679 4871 0.343372 TGGGAGATGCTTAGAGGGGT 59.657 55.000 0.00 0.00 0.00 4.95
3680 4872 0.761802 GGGAGATGCTTAGAGGGGTG 59.238 60.000 0.00 0.00 0.00 4.61
3681 4873 0.107643 GGAGATGCTTAGAGGGGTGC 59.892 60.000 0.00 0.00 0.00 5.01
3682 4874 1.127343 GAGATGCTTAGAGGGGTGCT 58.873 55.000 0.00 0.00 0.00 4.40
3683 4875 1.488393 GAGATGCTTAGAGGGGTGCTT 59.512 52.381 0.00 0.00 0.00 3.91
3684 4876 2.700897 GAGATGCTTAGAGGGGTGCTTA 59.299 50.000 0.00 0.00 0.00 3.09
3685 4877 2.703007 AGATGCTTAGAGGGGTGCTTAG 59.297 50.000 0.00 0.00 0.00 2.18
3686 4878 2.247699 TGCTTAGAGGGGTGCTTAGA 57.752 50.000 0.00 0.00 0.00 2.10
3687 4879 2.546899 TGCTTAGAGGGGTGCTTAGAA 58.453 47.619 0.00 0.00 0.00 2.10
3688 4880 2.910319 TGCTTAGAGGGGTGCTTAGAAA 59.090 45.455 0.00 0.00 0.00 2.52
3689 4881 3.329520 TGCTTAGAGGGGTGCTTAGAAAA 59.670 43.478 0.00 0.00 0.00 2.29
3690 4882 4.202524 TGCTTAGAGGGGTGCTTAGAAAAA 60.203 41.667 0.00 0.00 0.00 1.94
3691 4883 4.950475 GCTTAGAGGGGTGCTTAGAAAAAT 59.050 41.667 0.00 0.00 0.00 1.82
3692 4884 6.120220 GCTTAGAGGGGTGCTTAGAAAAATA 58.880 40.000 0.00 0.00 0.00 1.40
3693 4885 6.602009 GCTTAGAGGGGTGCTTAGAAAAATAA 59.398 38.462 0.00 0.00 0.00 1.40
3694 4886 7.122204 GCTTAGAGGGGTGCTTAGAAAAATAAA 59.878 37.037 0.00 0.00 0.00 1.40
3695 4887 6.835819 AGAGGGGTGCTTAGAAAAATAAAC 57.164 37.500 0.00 0.00 0.00 2.01
3696 4888 5.715279 AGAGGGGTGCTTAGAAAAATAAACC 59.285 40.000 0.00 0.00 0.00 3.27
3697 4889 4.461431 AGGGGTGCTTAGAAAAATAAACCG 59.539 41.667 0.00 0.00 0.00 4.44
3698 4890 4.460034 GGGGTGCTTAGAAAAATAAACCGA 59.540 41.667 0.00 0.00 0.00 4.69
3699 4891 5.392703 GGGGTGCTTAGAAAAATAAACCGAG 60.393 44.000 0.00 0.00 0.00 4.63
3700 4892 5.413523 GGGTGCTTAGAAAAATAAACCGAGA 59.586 40.000 0.00 0.00 0.00 4.04
3701 4893 6.095021 GGGTGCTTAGAAAAATAAACCGAGAT 59.905 38.462 0.00 0.00 0.00 2.75
3702 4894 7.362660 GGGTGCTTAGAAAAATAAACCGAGATT 60.363 37.037 0.00 0.00 0.00 2.40
3703 4895 8.027189 GGTGCTTAGAAAAATAAACCGAGATTT 58.973 33.333 0.00 0.00 0.00 2.17
3704 4896 9.406828 GTGCTTAGAAAAATAAACCGAGATTTT 57.593 29.630 0.00 0.00 36.94 1.82
3705 4897 9.620660 TGCTTAGAAAAATAAACCGAGATTTTC 57.379 29.630 0.00 0.00 39.23 2.29
3706 4898 9.841880 GCTTAGAAAAATAAACCGAGATTTTCT 57.158 29.630 14.07 14.07 46.39 2.52
3712 4904 9.974980 AAAAATAAACCGAGATTTTCTTAAGCA 57.025 25.926 0.00 0.00 34.86 3.91
3713 4905 8.965986 AAATAAACCGAGATTTTCTTAAGCAC 57.034 30.769 0.00 0.00 0.00 4.40
3714 4906 5.372547 AAACCGAGATTTTCTTAAGCACC 57.627 39.130 0.00 0.00 0.00 5.01
3715 4907 3.000727 ACCGAGATTTTCTTAAGCACCG 58.999 45.455 0.00 0.00 0.00 4.94
3716 4908 2.351726 CCGAGATTTTCTTAAGCACCGG 59.648 50.000 0.00 0.00 0.00 5.28
3717 4909 3.000727 CGAGATTTTCTTAAGCACCGGT 58.999 45.455 0.00 0.00 0.00 5.28
3718 4910 3.181520 CGAGATTTTCTTAAGCACCGGTG 60.182 47.826 30.66 30.66 0.00 4.94
3719 4911 3.751518 AGATTTTCTTAAGCACCGGTGT 58.248 40.909 33.92 19.11 0.00 4.16
3720 4912 3.751698 AGATTTTCTTAAGCACCGGTGTC 59.248 43.478 33.92 25.30 0.00 3.67
3721 4913 2.922740 TTTCTTAAGCACCGGTGTCT 57.077 45.000 33.92 26.98 0.00 3.41
3722 4914 4.339872 TTTTCTTAAGCACCGGTGTCTA 57.660 40.909 33.92 22.26 0.00 2.59
3723 4915 4.546829 TTTCTTAAGCACCGGTGTCTAT 57.453 40.909 33.92 19.89 0.00 1.98
3724 4916 4.546829 TTCTTAAGCACCGGTGTCTATT 57.453 40.909 33.92 23.99 0.00 1.73
3725 4917 4.546829 TCTTAAGCACCGGTGTCTATTT 57.453 40.909 33.92 21.40 0.00 1.40
3726 4918 4.501071 TCTTAAGCACCGGTGTCTATTTC 58.499 43.478 33.92 16.50 0.00 2.17
3727 4919 4.222145 TCTTAAGCACCGGTGTCTATTTCT 59.778 41.667 33.92 18.51 0.00 2.52
3728 4920 5.419788 TCTTAAGCACCGGTGTCTATTTCTA 59.580 40.000 33.92 16.94 0.00 2.10
3729 4921 3.521947 AGCACCGGTGTCTATTTCTAC 57.478 47.619 33.92 14.30 0.00 2.59
3730 4922 2.829720 AGCACCGGTGTCTATTTCTACA 59.170 45.455 33.92 0.00 0.00 2.74
3731 4923 3.119101 AGCACCGGTGTCTATTTCTACAG 60.119 47.826 33.92 5.41 0.00 2.74
3732 4924 3.782046 CACCGGTGTCTATTTCTACAGG 58.218 50.000 26.95 0.00 35.04 4.00
3733 4925 3.446161 CACCGGTGTCTATTTCTACAGGA 59.554 47.826 26.95 0.00 33.46 3.86
3734 4926 3.700038 ACCGGTGTCTATTTCTACAGGAG 59.300 47.826 6.12 0.00 33.46 3.69
3735 4927 3.952323 CCGGTGTCTATTTCTACAGGAGA 59.048 47.826 0.00 0.00 31.25 3.71
3736 4928 4.036971 CCGGTGTCTATTTCTACAGGAGAG 59.963 50.000 0.00 0.00 34.93 3.20
3737 4929 4.882427 CGGTGTCTATTTCTACAGGAGAGA 59.118 45.833 0.00 0.00 34.93 3.10
3738 4930 5.220892 CGGTGTCTATTTCTACAGGAGAGAC 60.221 48.000 0.00 0.00 34.93 3.36
3739 4931 5.220892 GGTGTCTATTTCTACAGGAGAGACG 60.221 48.000 0.00 0.00 34.93 4.18
3740 4932 4.335874 TGTCTATTTCTACAGGAGAGACGC 59.664 45.833 0.00 0.00 34.93 5.19
3741 4933 4.577283 GTCTATTTCTACAGGAGAGACGCT 59.423 45.833 0.00 0.00 34.93 5.07
3742 4934 5.066764 GTCTATTTCTACAGGAGAGACGCTT 59.933 44.000 0.00 0.00 34.93 4.68
3743 4935 6.260493 GTCTATTTCTACAGGAGAGACGCTTA 59.740 42.308 0.00 0.00 34.93 3.09
3744 4936 4.966965 TTTCTACAGGAGAGACGCTTAG 57.033 45.455 0.00 0.00 34.93 2.18
3745 4937 3.630892 TCTACAGGAGAGACGCTTAGT 57.369 47.619 0.00 0.00 0.00 2.24
3746 4938 3.952931 TCTACAGGAGAGACGCTTAGTT 58.047 45.455 0.00 0.00 0.00 2.24
3747 4939 5.095145 TCTACAGGAGAGACGCTTAGTTA 57.905 43.478 0.00 0.00 0.00 2.24
3748 4940 5.494724 TCTACAGGAGAGACGCTTAGTTAA 58.505 41.667 0.00 0.00 0.00 2.01
3749 4941 4.705337 ACAGGAGAGACGCTTAGTTAAG 57.295 45.455 0.00 0.00 36.40 1.85
3750 4942 9.223557 TTCTACAGGAGAGACGCTTAGTTAAGC 62.224 44.444 12.72 12.72 44.08 3.09
3764 4956 6.519679 TTAGTTAAGCGTCTATCCTGTTCA 57.480 37.500 0.00 0.00 0.00 3.18
3765 4957 5.401531 AGTTAAGCGTCTATCCTGTTCAA 57.598 39.130 0.00 0.00 0.00 2.69
3766 4958 5.790593 AGTTAAGCGTCTATCCTGTTCAAA 58.209 37.500 0.00 0.00 0.00 2.69
3767 4959 6.407202 AGTTAAGCGTCTATCCTGTTCAAAT 58.593 36.000 0.00 0.00 0.00 2.32
3768 4960 7.553334 AGTTAAGCGTCTATCCTGTTCAAATA 58.447 34.615 0.00 0.00 0.00 1.40
3769 4961 8.038944 AGTTAAGCGTCTATCCTGTTCAAATAA 58.961 33.333 0.00 0.00 0.00 1.40
3770 4962 6.910536 AAGCGTCTATCCTGTTCAAATAAG 57.089 37.500 0.00 0.00 0.00 1.73
3771 4963 4.811557 AGCGTCTATCCTGTTCAAATAAGC 59.188 41.667 0.00 0.00 0.00 3.09
3772 4964 4.570772 GCGTCTATCCTGTTCAAATAAGCA 59.429 41.667 0.00 0.00 0.00 3.91
3773 4965 5.502544 GCGTCTATCCTGTTCAAATAAGCAC 60.503 44.000 0.00 0.00 0.00 4.40
3774 4966 5.006746 CGTCTATCCTGTTCAAATAAGCACC 59.993 44.000 0.00 0.00 0.00 5.01
3775 4967 5.006746 GTCTATCCTGTTCAAATAAGCACCG 59.993 44.000 0.00 0.00 0.00 4.94
3776 4968 3.410631 TCCTGTTCAAATAAGCACCGA 57.589 42.857 0.00 0.00 0.00 4.69
3777 4969 3.950397 TCCTGTTCAAATAAGCACCGAT 58.050 40.909 0.00 0.00 0.00 4.18
3778 4970 3.689161 TCCTGTTCAAATAAGCACCGATG 59.311 43.478 0.00 0.00 0.00 3.84
3793 4985 4.962693 CACCGATGCTTAAGAAAAGTCTG 58.037 43.478 6.67 0.00 33.05 3.51
3794 4986 4.003648 ACCGATGCTTAAGAAAAGTCTGG 58.996 43.478 6.67 0.03 33.05 3.86
3795 4987 4.003648 CCGATGCTTAAGAAAAGTCTGGT 58.996 43.478 6.67 0.00 33.05 4.00
3796 4988 4.455877 CCGATGCTTAAGAAAAGTCTGGTT 59.544 41.667 6.67 0.00 33.05 3.67
3797 4989 5.048713 CCGATGCTTAAGAAAAGTCTGGTTT 60.049 40.000 6.67 0.00 33.05 3.27
3798 4990 6.148811 CCGATGCTTAAGAAAAGTCTGGTTTA 59.851 38.462 6.67 0.00 33.05 2.01
3799 4991 7.148239 CCGATGCTTAAGAAAAGTCTGGTTTAT 60.148 37.037 6.67 0.00 33.05 1.40
3800 4992 8.237267 CGATGCTTAAGAAAAGTCTGGTTTATT 58.763 33.333 6.67 0.00 33.05 1.40
3801 4993 9.914131 GATGCTTAAGAAAAGTCTGGTTTATTT 57.086 29.630 6.67 0.00 33.05 1.40
3802 4994 9.914131 ATGCTTAAGAAAAGTCTGGTTTATTTC 57.086 29.630 6.67 0.00 33.05 2.17
3803 4995 9.131791 TGCTTAAGAAAAGTCTGGTTTATTTCT 57.868 29.630 6.67 0.00 40.90 2.52
3804 4996 9.613957 GCTTAAGAAAAGTCTGGTTTATTTCTC 57.386 33.333 6.67 0.00 38.89 2.87
3809 5001 9.004717 AGAAAAGTCTGGTTTATTTCTCTAAGC 57.995 33.333 0.00 0.00 35.96 3.09
3810 5002 8.691661 AAAAGTCTGGTTTATTTCTCTAAGCA 57.308 30.769 0.00 0.00 0.00 3.91
3811 5003 7.674471 AAGTCTGGTTTATTTCTCTAAGCAC 57.326 36.000 0.00 0.00 0.00 4.40
3812 5004 6.174049 AGTCTGGTTTATTTCTCTAAGCACC 58.826 40.000 0.00 0.00 0.00 5.01
3813 5005 6.013293 AGTCTGGTTTATTTCTCTAAGCACCT 60.013 38.462 0.00 0.00 0.00 4.00
3814 5006 6.314152 GTCTGGTTTATTTCTCTAAGCACCTC 59.686 42.308 0.00 0.00 0.00 3.85
3815 5007 5.497474 TGGTTTATTTCTCTAAGCACCTCC 58.503 41.667 0.00 0.00 0.00 4.30
3816 5008 4.882427 GGTTTATTTCTCTAAGCACCTCCC 59.118 45.833 0.00 0.00 0.00 4.30
3817 5009 5.497474 GTTTATTTCTCTAAGCACCTCCCA 58.503 41.667 0.00 0.00 0.00 4.37
3818 5010 5.975988 TTATTTCTCTAAGCACCTCCCAT 57.024 39.130 0.00 0.00 0.00 4.00
3819 5011 4.870021 ATTTCTCTAAGCACCTCCCATT 57.130 40.909 0.00 0.00 0.00 3.16
3820 5012 3.634397 TTCTCTAAGCACCTCCCATTG 57.366 47.619 0.00 0.00 0.00 2.82
3821 5013 2.551270 TCTCTAAGCACCTCCCATTGT 58.449 47.619 0.00 0.00 0.00 2.71
3822 5014 3.719871 TCTCTAAGCACCTCCCATTGTA 58.280 45.455 0.00 0.00 0.00 2.41
3823 5015 3.451178 TCTCTAAGCACCTCCCATTGTAC 59.549 47.826 0.00 0.00 0.00 2.90
3824 5016 3.178046 TCTAAGCACCTCCCATTGTACA 58.822 45.455 0.00 0.00 0.00 2.90
3825 5017 2.969821 AAGCACCTCCCATTGTACAA 57.030 45.000 11.41 11.41 0.00 2.41
3826 5018 2.496899 AGCACCTCCCATTGTACAAG 57.503 50.000 14.65 6.30 0.00 3.16
3827 5019 1.004745 AGCACCTCCCATTGTACAAGG 59.995 52.381 14.65 13.92 0.00 3.61
3828 5020 1.463674 CACCTCCCATTGTACAAGGC 58.536 55.000 14.66 0.00 0.00 4.35
3829 5021 0.331616 ACCTCCCATTGTACAAGGCC 59.668 55.000 14.66 0.00 0.00 5.19
3830 5022 0.625849 CCTCCCATTGTACAAGGCCT 59.374 55.000 14.66 0.00 0.00 5.19
3831 5023 1.005924 CCTCCCATTGTACAAGGCCTT 59.994 52.381 13.78 13.78 0.00 4.35
3832 5024 2.241176 CCTCCCATTGTACAAGGCCTTA 59.759 50.000 20.00 1.64 0.00 2.69
3833 5025 3.545703 CTCCCATTGTACAAGGCCTTAG 58.454 50.000 20.00 15.05 0.00 2.18
3834 5026 3.186283 TCCCATTGTACAAGGCCTTAGA 58.814 45.455 20.00 5.98 0.00 2.10
3835 5027 3.054655 TCCCATTGTACAAGGCCTTAGAC 60.055 47.826 20.00 18.81 0.00 2.59
3836 5028 3.054361 CCCATTGTACAAGGCCTTAGACT 60.054 47.826 20.00 3.48 0.00 3.24
3837 5029 3.941483 CCATTGTACAAGGCCTTAGACTG 59.059 47.826 20.00 9.01 0.00 3.51
3838 5030 4.323485 CCATTGTACAAGGCCTTAGACTGA 60.323 45.833 20.00 11.86 0.00 3.41
3839 5031 5.431765 CATTGTACAAGGCCTTAGACTGAT 58.568 41.667 20.00 13.43 0.00 2.90
3840 5032 4.471904 TGTACAAGGCCTTAGACTGATG 57.528 45.455 20.00 6.46 0.00 3.07
3841 5033 4.093743 TGTACAAGGCCTTAGACTGATGA 58.906 43.478 20.00 0.00 0.00 2.92
3842 5034 4.716784 TGTACAAGGCCTTAGACTGATGAT 59.283 41.667 20.00 0.00 0.00 2.45
3843 5035 4.851639 ACAAGGCCTTAGACTGATGATT 57.148 40.909 20.00 0.00 0.00 2.57
3844 5036 5.184892 ACAAGGCCTTAGACTGATGATTT 57.815 39.130 20.00 0.00 0.00 2.17
3845 5037 4.946157 ACAAGGCCTTAGACTGATGATTTG 59.054 41.667 20.00 3.45 0.00 2.32
3846 5038 4.851639 AGGCCTTAGACTGATGATTTGT 57.148 40.909 0.00 0.00 0.00 2.83
3847 5039 5.184892 AGGCCTTAGACTGATGATTTGTT 57.815 39.130 0.00 0.00 0.00 2.83
3848 5040 5.189180 AGGCCTTAGACTGATGATTTGTTC 58.811 41.667 0.00 0.00 0.00 3.18
3849 5041 4.943705 GGCCTTAGACTGATGATTTGTTCA 59.056 41.667 0.00 0.00 39.12 3.18
3850 5042 5.415701 GGCCTTAGACTGATGATTTGTTCAA 59.584 40.000 0.00 0.00 38.03 2.69
3851 5043 6.071952 GGCCTTAGACTGATGATTTGTTCAAA 60.072 38.462 0.00 0.44 38.03 2.69
3852 5044 7.363268 GGCCTTAGACTGATGATTTGTTCAAAT 60.363 37.037 10.04 10.04 38.03 2.32
3853 5045 7.487189 GCCTTAGACTGATGATTTGTTCAAATG 59.513 37.037 14.29 3.94 38.03 2.32
3854 5046 8.733458 CCTTAGACTGATGATTTGTTCAAATGA 58.267 33.333 14.29 7.56 38.03 2.57
3858 5050 9.419297 AGACTGATGATTTGTTCAAATGAAATG 57.581 29.630 14.29 5.86 38.03 2.32
3859 5051 8.542497 ACTGATGATTTGTTCAAATGAAATGG 57.458 30.769 14.29 4.64 38.03 3.16
3860 5052 8.369424 ACTGATGATTTGTTCAAATGAAATGGA 58.631 29.630 14.29 0.00 38.03 3.41
3861 5053 8.766000 TGATGATTTGTTCAAATGAAATGGAG 57.234 30.769 14.29 0.00 38.03 3.86
3862 5054 7.332430 TGATGATTTGTTCAAATGAAATGGAGC 59.668 33.333 14.29 0.00 38.03 4.70
3863 5055 5.634439 TGATTTGTTCAAATGAAATGGAGCG 59.366 36.000 14.29 0.00 35.58 5.03
3864 5056 4.844998 TTGTTCAAATGAAATGGAGCGA 57.155 36.364 0.00 0.00 35.58 4.93
3865 5057 4.844998 TGTTCAAATGAAATGGAGCGAA 57.155 36.364 0.00 0.00 35.58 4.70
3866 5058 5.193663 TGTTCAAATGAAATGGAGCGAAA 57.806 34.783 0.00 0.00 35.58 3.46
3867 5059 5.595885 TGTTCAAATGAAATGGAGCGAAAA 58.404 33.333 0.00 0.00 35.58 2.29
3868 5060 5.691305 TGTTCAAATGAAATGGAGCGAAAAG 59.309 36.000 0.00 0.00 35.58 2.27
3869 5061 5.703978 TCAAATGAAATGGAGCGAAAAGA 57.296 34.783 0.00 0.00 0.00 2.52
3870 5062 5.702865 TCAAATGAAATGGAGCGAAAAGAG 58.297 37.500 0.00 0.00 0.00 2.85
3871 5063 4.708726 AATGAAATGGAGCGAAAAGAGG 57.291 40.909 0.00 0.00 0.00 3.69
3872 5064 3.417069 TGAAATGGAGCGAAAAGAGGA 57.583 42.857 0.00 0.00 0.00 3.71
3873 5065 3.338249 TGAAATGGAGCGAAAAGAGGAG 58.662 45.455 0.00 0.00 0.00 3.69
3874 5066 3.007940 TGAAATGGAGCGAAAAGAGGAGA 59.992 43.478 0.00 0.00 0.00 3.71
3875 5067 3.922171 AATGGAGCGAAAAGAGGAGAT 57.078 42.857 0.00 0.00 0.00 2.75
3876 5068 3.922171 ATGGAGCGAAAAGAGGAGATT 57.078 42.857 0.00 0.00 0.00 2.40
3877 5069 5.359194 AATGGAGCGAAAAGAGGAGATTA 57.641 39.130 0.00 0.00 0.00 1.75
3878 5070 4.392921 TGGAGCGAAAAGAGGAGATTAG 57.607 45.455 0.00 0.00 0.00 1.73
3879 5071 3.769844 TGGAGCGAAAAGAGGAGATTAGT 59.230 43.478 0.00 0.00 0.00 2.24
3880 5072 4.223032 TGGAGCGAAAAGAGGAGATTAGTT 59.777 41.667 0.00 0.00 0.00 2.24
3881 5073 5.179533 GGAGCGAAAAGAGGAGATTAGTTT 58.820 41.667 0.00 0.00 0.00 2.66
3882 5074 5.644206 GGAGCGAAAAGAGGAGATTAGTTTT 59.356 40.000 0.00 0.00 0.00 2.43
3883 5075 6.149640 GGAGCGAAAAGAGGAGATTAGTTTTT 59.850 38.462 0.00 0.00 0.00 1.94
3911 5103 8.770438 AAGACAGTGAAATGAGAGATTAGTTC 57.230 34.615 0.00 0.00 0.00 3.01
3912 5104 7.901029 AGACAGTGAAATGAGAGATTAGTTCA 58.099 34.615 0.00 0.00 0.00 3.18
3913 5105 8.370940 AGACAGTGAAATGAGAGATTAGTTCAA 58.629 33.333 0.00 0.00 33.43 2.69
3914 5106 8.316640 ACAGTGAAATGAGAGATTAGTTCAAC 57.683 34.615 0.00 0.00 33.43 3.18
3915 5107 7.933577 ACAGTGAAATGAGAGATTAGTTCAACA 59.066 33.333 0.00 0.00 33.43 3.33
3916 5108 8.441608 CAGTGAAATGAGAGATTAGTTCAACAG 58.558 37.037 0.00 0.00 33.43 3.16
3917 5109 8.370940 AGTGAAATGAGAGATTAGTTCAACAGA 58.629 33.333 0.00 0.00 33.43 3.41
3918 5110 9.160496 GTGAAATGAGAGATTAGTTCAACAGAT 57.840 33.333 0.00 0.00 33.43 2.90
3919 5111 9.159364 TGAAATGAGAGATTAGTTCAACAGATG 57.841 33.333 0.00 0.00 29.25 2.90
3920 5112 8.503458 AAATGAGAGATTAGTTCAACAGATGG 57.497 34.615 0.00 0.00 0.00 3.51
3921 5113 6.611613 TGAGAGATTAGTTCAACAGATGGT 57.388 37.500 0.00 0.00 0.00 3.55
3922 5114 6.401394 TGAGAGATTAGTTCAACAGATGGTG 58.599 40.000 0.00 0.00 0.00 4.17
3923 5115 5.181748 AGAGATTAGTTCAACAGATGGTGC 58.818 41.667 0.00 0.00 31.48 5.01
3924 5116 5.046014 AGAGATTAGTTCAACAGATGGTGCT 60.046 40.000 0.00 0.00 31.48 4.40
3925 5117 4.940046 AGATTAGTTCAACAGATGGTGCTG 59.060 41.667 0.00 0.00 41.63 4.41
3926 5118 1.242076 AGTTCAACAGATGGTGCTGC 58.758 50.000 0.00 0.00 39.51 5.25
3927 5119 1.202855 AGTTCAACAGATGGTGCTGCT 60.203 47.619 0.00 0.00 39.51 4.24
3928 5120 1.610522 GTTCAACAGATGGTGCTGCTT 59.389 47.619 0.00 0.00 39.51 3.91
3929 5121 1.985473 TCAACAGATGGTGCTGCTTT 58.015 45.000 0.00 0.00 39.51 3.51
3930 5122 2.309613 TCAACAGATGGTGCTGCTTTT 58.690 42.857 0.00 0.00 39.51 2.27
3931 5123 2.034939 TCAACAGATGGTGCTGCTTTTG 59.965 45.455 0.00 0.00 39.51 2.44
3932 5124 1.696063 ACAGATGGTGCTGCTTTTGT 58.304 45.000 0.00 0.00 39.51 2.83
3933 5125 2.862541 ACAGATGGTGCTGCTTTTGTA 58.137 42.857 0.00 0.00 39.51 2.41
3934 5126 3.424703 ACAGATGGTGCTGCTTTTGTAT 58.575 40.909 0.00 0.00 39.51 2.29
3935 5127 4.588899 ACAGATGGTGCTGCTTTTGTATA 58.411 39.130 0.00 0.00 39.51 1.47
3936 5128 4.396166 ACAGATGGTGCTGCTTTTGTATAC 59.604 41.667 0.00 0.00 39.51 1.47
3937 5129 4.637534 CAGATGGTGCTGCTTTTGTATACT 59.362 41.667 4.17 0.00 0.00 2.12
3938 5130 5.817296 CAGATGGTGCTGCTTTTGTATACTA 59.183 40.000 4.17 0.00 0.00 1.82
3939 5131 6.316140 CAGATGGTGCTGCTTTTGTATACTAA 59.684 38.462 4.17 0.00 0.00 2.24
3940 5132 7.012704 CAGATGGTGCTGCTTTTGTATACTAAT 59.987 37.037 4.17 0.00 0.00 1.73
3941 5133 7.557719 AGATGGTGCTGCTTTTGTATACTAATT 59.442 33.333 4.17 0.00 0.00 1.40
3942 5134 6.851609 TGGTGCTGCTTTTGTATACTAATTG 58.148 36.000 4.17 1.15 0.00 2.32
3943 5135 6.657117 TGGTGCTGCTTTTGTATACTAATTGA 59.343 34.615 4.17 0.00 0.00 2.57
3944 5136 7.339212 TGGTGCTGCTTTTGTATACTAATTGAT 59.661 33.333 4.17 0.00 0.00 2.57
3945 5137 8.190784 GGTGCTGCTTTTGTATACTAATTGATT 58.809 33.333 4.17 0.00 0.00 2.57
3960 5152 8.839310 ACTAATTGATTATCTAGTGCATGGAC 57.161 34.615 9.70 9.70 0.00 4.02
3961 5153 7.880195 ACTAATTGATTATCTAGTGCATGGACC 59.120 37.037 14.38 0.00 0.00 4.46
3962 5154 4.623932 TGATTATCTAGTGCATGGACCC 57.376 45.455 14.38 0.00 0.00 4.46
3963 5155 3.973305 TGATTATCTAGTGCATGGACCCA 59.027 43.478 14.38 1.25 0.00 4.51
3964 5156 4.411869 TGATTATCTAGTGCATGGACCCAA 59.588 41.667 14.38 0.00 0.00 4.12
3965 5157 4.422073 TTATCTAGTGCATGGACCCAAG 57.578 45.455 14.38 9.42 0.00 3.61
3966 5158 0.253044 TCTAGTGCATGGACCCAAGC 59.747 55.000 14.38 9.13 40.56 4.01
3967 5159 0.035152 CTAGTGCATGGACCCAAGCA 60.035 55.000 14.38 14.13 46.31 3.91
3969 5161 3.169378 TGCATGGACCCAAGCAGA 58.831 55.556 14.13 0.00 44.16 4.26
3970 5162 1.459812 TGCATGGACCCAAGCAGAA 59.540 52.632 14.13 0.00 44.16 3.02
3971 5163 0.040058 TGCATGGACCCAAGCAGAAT 59.960 50.000 14.13 0.00 44.16 2.40
3972 5164 0.743097 GCATGGACCCAAGCAGAATC 59.257 55.000 10.96 0.00 39.99 2.52
3973 5165 1.684248 GCATGGACCCAAGCAGAATCT 60.684 52.381 10.96 0.00 39.99 2.40
3974 5166 2.421952 GCATGGACCCAAGCAGAATCTA 60.422 50.000 10.96 0.00 39.99 1.98
3975 5167 3.474600 CATGGACCCAAGCAGAATCTAG 58.525 50.000 0.00 0.00 0.00 2.43
3976 5168 1.210478 TGGACCCAAGCAGAATCTAGC 59.790 52.381 0.00 0.00 0.00 3.42
3977 5169 1.475930 GGACCCAAGCAGAATCTAGCC 60.476 57.143 2.03 0.00 0.00 3.93
3978 5170 0.179000 ACCCAAGCAGAATCTAGCCG 59.821 55.000 2.03 0.00 0.00 5.52
3979 5171 0.179000 CCCAAGCAGAATCTAGCCGT 59.821 55.000 2.03 0.00 0.00 5.68
3980 5172 1.407437 CCCAAGCAGAATCTAGCCGTT 60.407 52.381 2.03 0.00 0.00 4.44
3981 5173 2.359900 CCAAGCAGAATCTAGCCGTTT 58.640 47.619 2.03 0.00 0.00 3.60
3982 5174 3.531538 CCAAGCAGAATCTAGCCGTTTA 58.468 45.455 2.03 0.00 0.00 2.01
3983 5175 3.309954 CCAAGCAGAATCTAGCCGTTTAC 59.690 47.826 2.03 0.00 0.00 2.01
3984 5176 2.810650 AGCAGAATCTAGCCGTTTACG 58.189 47.619 0.00 0.00 39.44 3.18
3985 5177 2.426024 AGCAGAATCTAGCCGTTTACGA 59.574 45.455 3.46 0.00 43.02 3.43
3986 5178 3.068307 AGCAGAATCTAGCCGTTTACGAT 59.932 43.478 3.46 0.00 43.02 3.73
3987 5179 3.802685 GCAGAATCTAGCCGTTTACGATT 59.197 43.478 3.46 0.00 43.02 3.34
3988 5180 4.318121 GCAGAATCTAGCCGTTTACGATTG 60.318 45.833 3.46 0.00 43.02 2.67
3989 5181 4.804139 CAGAATCTAGCCGTTTACGATTGT 59.196 41.667 3.46 0.00 43.02 2.71
3990 5182 5.975344 CAGAATCTAGCCGTTTACGATTGTA 59.025 40.000 3.46 0.00 43.02 2.41
3991 5183 6.474427 CAGAATCTAGCCGTTTACGATTGTAA 59.526 38.462 3.46 1.08 43.02 2.41
3992 5184 7.169308 CAGAATCTAGCCGTTTACGATTGTAAT 59.831 37.037 6.37 0.00 40.14 1.89
3993 5185 7.381678 AGAATCTAGCCGTTTACGATTGTAATC 59.618 37.037 6.37 5.28 40.14 1.75
3994 5186 5.893687 TCTAGCCGTTTACGATTGTAATCA 58.106 37.500 6.37 0.00 40.14 2.57
3995 5187 6.509656 TCTAGCCGTTTACGATTGTAATCAT 58.490 36.000 6.37 0.00 40.14 2.45
3996 5188 7.650890 TCTAGCCGTTTACGATTGTAATCATA 58.349 34.615 6.37 0.27 40.14 2.15
3997 5189 6.764877 AGCCGTTTACGATTGTAATCATAG 57.235 37.500 6.37 0.33 40.14 2.23
3998 5190 6.278363 AGCCGTTTACGATTGTAATCATAGT 58.722 36.000 6.37 0.00 40.14 2.12
3999 5191 6.420008 AGCCGTTTACGATTGTAATCATAGTC 59.580 38.462 6.37 0.00 40.14 2.59
4000 5192 6.612913 GCCGTTTACGATTGTAATCATAGTCG 60.613 42.308 6.37 0.00 40.14 4.18
4001 5193 6.129273 CCGTTTACGATTGTAATCATAGTCGG 60.129 42.308 6.37 8.41 40.14 4.79
4002 5194 6.634035 CGTTTACGATTGTAATCATAGTCGGA 59.366 38.462 6.37 0.00 40.14 4.55
4003 5195 7.325338 CGTTTACGATTGTAATCATAGTCGGAT 59.675 37.037 6.37 0.00 40.14 4.18
4004 5196 8.425491 GTTTACGATTGTAATCATAGTCGGATG 58.575 37.037 6.37 0.00 40.14 3.51
4005 5197 6.327279 ACGATTGTAATCATAGTCGGATGA 57.673 37.500 5.55 0.00 40.08 2.92
4006 5198 6.925211 ACGATTGTAATCATAGTCGGATGAT 58.075 36.000 5.55 3.44 46.35 2.45
4007 5199 8.051901 ACGATTGTAATCATAGTCGGATGATA 57.948 34.615 8.25 0.00 44.15 2.15
4008 5200 8.520351 ACGATTGTAATCATAGTCGGATGATAA 58.480 33.333 8.25 2.25 44.15 1.75
4009 5201 9.014533 CGATTGTAATCATAGTCGGATGATAAG 57.985 37.037 8.25 0.00 44.15 1.73
4010 5202 9.307121 GATTGTAATCATAGTCGGATGATAAGG 57.693 37.037 8.25 0.00 44.15 2.69
4011 5203 8.417273 TTGTAATCATAGTCGGATGATAAGGA 57.583 34.615 8.25 0.00 44.15 3.36
4012 5204 8.417273 TGTAATCATAGTCGGATGATAAGGAA 57.583 34.615 8.25 0.00 44.15 3.36
4013 5205 8.304596 TGTAATCATAGTCGGATGATAAGGAAC 58.695 37.037 8.25 4.72 44.15 3.62
4014 5206 7.546250 AATCATAGTCGGATGATAAGGAACT 57.454 36.000 8.25 0.00 44.15 3.01
4015 5207 6.978674 TCATAGTCGGATGATAAGGAACTT 57.021 37.500 0.00 0.00 40.67 2.66
4016 5208 7.361457 TCATAGTCGGATGATAAGGAACTTT 57.639 36.000 0.00 0.00 39.26 2.66
4017 5209 8.473358 TCATAGTCGGATGATAAGGAACTTTA 57.527 34.615 0.00 0.00 39.26 1.85
4018 5210 8.920174 TCATAGTCGGATGATAAGGAACTTTAA 58.080 33.333 0.00 0.00 39.26 1.52
4048 5240 8.597662 TTATATTATTACTTCCGTTCACCTGC 57.402 34.615 0.00 0.00 0.00 4.85
4049 5241 2.109425 ATTACTTCCGTTCACCTGCC 57.891 50.000 0.00 0.00 0.00 4.85
4050 5242 0.759959 TTACTTCCGTTCACCTGCCA 59.240 50.000 0.00 0.00 0.00 4.92
4051 5243 0.981183 TACTTCCGTTCACCTGCCAT 59.019 50.000 0.00 0.00 0.00 4.40
4052 5244 0.110486 ACTTCCGTTCACCTGCCATT 59.890 50.000 0.00 0.00 0.00 3.16
4053 5245 1.247567 CTTCCGTTCACCTGCCATTT 58.752 50.000 0.00 0.00 0.00 2.32
4054 5246 0.958091 TTCCGTTCACCTGCCATTTG 59.042 50.000 0.00 0.00 0.00 2.32
4055 5247 0.109532 TCCGTTCACCTGCCATTTGA 59.890 50.000 0.00 0.00 0.00 2.69
4056 5248 0.523072 CCGTTCACCTGCCATTTGAG 59.477 55.000 0.00 0.00 0.00 3.02
4057 5249 1.238439 CGTTCACCTGCCATTTGAGT 58.762 50.000 0.00 0.00 0.00 3.41
4058 5250 1.608590 CGTTCACCTGCCATTTGAGTT 59.391 47.619 0.00 0.00 0.00 3.01
4059 5251 2.811431 CGTTCACCTGCCATTTGAGTTA 59.189 45.455 0.00 0.00 0.00 2.24
4060 5252 3.252215 CGTTCACCTGCCATTTGAGTTAA 59.748 43.478 0.00 0.00 0.00 2.01
4061 5253 4.613622 CGTTCACCTGCCATTTGAGTTAAG 60.614 45.833 0.00 0.00 0.00 1.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 2.668632 GGTCTCCGCCATGGTCAA 59.331 61.111 14.67 0.00 39.52 3.18
105 107 1.080705 CGGACACCTTGAGACCGAC 60.081 63.158 0.00 0.00 45.31 4.79
114 116 4.070552 GAGGCGCTCGGACACCTT 62.071 66.667 7.64 0.00 30.95 3.50
189 191 2.065906 GAGAGGTAGCGAAGGAGGCG 62.066 65.000 0.00 0.00 35.00 5.52
353 356 2.428544 TATAAACAAGCATGGCGGGT 57.571 45.000 0.00 0.00 0.00 5.28
463 479 9.919416 ACATACTGCATAGATCATAGAGATAGT 57.081 33.333 0.00 0.00 37.00 2.12
523 539 1.771854 TCCCTCTACAACCACAAGCAA 59.228 47.619 0.00 0.00 0.00 3.91
526 542 6.215845 CAAATTTTCCCTCTACAACCACAAG 58.784 40.000 0.00 0.00 0.00 3.16
537 553 5.023452 GGACAATACCCAAATTTTCCCTCT 58.977 41.667 0.00 0.00 31.99 3.69
584 601 3.708426 TATTCGCCTGCAGGTGTGTCC 62.708 57.143 38.24 19.13 45.57 4.02
593 610 2.124736 GTGCCCTATTCGCCTGCA 60.125 61.111 0.00 0.00 0.00 4.41
596 613 0.258774 ATTTGGTGCCCTATTCGCCT 59.741 50.000 0.00 0.00 35.25 5.52
642 659 1.291877 GCATCGCCTGTCACGTCTTT 61.292 55.000 0.00 0.00 0.00 2.52
682 699 3.632604 CCTATACATCTGTATCCGCGGAT 59.367 47.826 39.97 39.97 41.18 4.18
683 700 3.014623 CCTATACATCTGTATCCGCGGA 58.985 50.000 33.12 33.12 41.18 5.54
684 701 2.099263 CCCTATACATCTGTATCCGCGG 59.901 54.545 22.12 22.12 41.18 6.46
686 703 2.159085 GGCCCTATACATCTGTATCCGC 60.159 54.545 6.13 6.82 41.18 5.54
687 704 3.366396 AGGCCCTATACATCTGTATCCG 58.634 50.000 0.00 0.60 41.18 4.18
707 726 4.876107 ACAACCATAGTTAGCAAATCCGAG 59.124 41.667 0.00 0.00 33.27 4.63
715 734 4.030913 AGCCTCTACAACCATAGTTAGCA 58.969 43.478 0.00 0.00 33.27 3.49
716 735 4.342665 AGAGCCTCTACAACCATAGTTAGC 59.657 45.833 0.00 0.00 33.27 3.09
717 736 5.594725 TCAGAGCCTCTACAACCATAGTTAG 59.405 44.000 0.00 0.00 33.27 2.34
734 753 0.694444 TAACCCATCCCCTCAGAGCC 60.694 60.000 0.00 0.00 0.00 4.70
740 759 1.134068 GCAACTCTAACCCATCCCCTC 60.134 57.143 0.00 0.00 0.00 4.30
746 765 3.606687 CGGTTAAGCAACTCTAACCCAT 58.393 45.455 5.38 0.00 38.89 4.00
899 918 3.404899 TCCGTTGAAGTGGTGGTAAATC 58.595 45.455 0.00 0.00 0.00 2.17
975 999 3.775654 GAGGGAGCGGTGTGGAGG 61.776 72.222 0.00 0.00 0.00 4.30
977 1001 2.680352 GAGAGGGAGCGGTGTGGA 60.680 66.667 0.00 0.00 0.00 4.02
980 1004 1.979693 GACAGAGAGGGAGCGGTGT 60.980 63.158 0.00 0.00 0.00 4.16
982 1006 2.559922 ATCGACAGAGAGGGAGCGGT 62.560 60.000 0.00 0.00 0.00 5.68
983 1007 1.826054 ATCGACAGAGAGGGAGCGG 60.826 63.158 0.00 0.00 0.00 5.52
984 1008 1.358402 CATCGACAGAGAGGGAGCG 59.642 63.158 0.00 0.00 0.00 5.03
985 1009 1.739049 CCATCGACAGAGAGGGAGC 59.261 63.158 0.00 0.00 44.18 4.70
1420 1493 3.814906 TGGTGGTGGTGGTGGTGG 61.815 66.667 0.00 0.00 0.00 4.61
1421 1494 2.518349 GTGGTGGTGGTGGTGGTG 60.518 66.667 0.00 0.00 0.00 4.17
1422 1495 3.816090 GGTGGTGGTGGTGGTGGT 61.816 66.667 0.00 0.00 0.00 4.16
1423 1496 4.947147 CGGTGGTGGTGGTGGTGG 62.947 72.222 0.00 0.00 0.00 4.61
1424 1497 4.947147 CCGGTGGTGGTGGTGGTG 62.947 72.222 0.00 0.00 0.00 4.17
1429 1502 4.263572 TTGAGCCGGTGGTGGTGG 62.264 66.667 1.90 0.00 0.00 4.61
1430 1503 2.978010 GTTGAGCCGGTGGTGGTG 60.978 66.667 1.90 0.00 0.00 4.17
1431 1504 4.265056 GGTTGAGCCGGTGGTGGT 62.265 66.667 1.90 0.00 0.00 4.16
1874 1962 3.131046 GCCAATTCCATTTCCAATCTCGT 59.869 43.478 0.00 0.00 0.00 4.18
1875 1963 3.709987 GCCAATTCCATTTCCAATCTCG 58.290 45.455 0.00 0.00 0.00 4.04
1877 1965 2.431782 CCGCCAATTCCATTTCCAATCT 59.568 45.455 0.00 0.00 0.00 2.40
1878 1966 2.825205 CCGCCAATTCCATTTCCAATC 58.175 47.619 0.00 0.00 0.00 2.67
1892 1986 1.899437 TTTTGGGTTGTTGCCGCCAA 61.899 50.000 0.00 0.00 0.00 4.52
1901 1995 2.200337 GCCGGAGCTTTTGGGTTGT 61.200 57.895 5.05 0.00 35.50 3.32
1903 1997 2.600470 GGCCGGAGCTTTTGGGTT 60.600 61.111 5.05 0.00 39.73 4.11
1905 1999 3.064324 CTGGCCGGAGCTTTTGGG 61.064 66.667 5.28 0.00 39.73 4.12
1918 2012 0.397254 TACCTGCTCCTACTCCTGGC 60.397 60.000 0.00 0.00 0.00 4.85
2006 2164 8.591072 ACTAAGTAACTAGACCATAAGCACAAA 58.409 33.333 0.00 0.00 0.00 2.83
2057 2221 3.699538 GGGTTCTTCTTCCAAAACAGTGT 59.300 43.478 0.00 0.00 0.00 3.55
2060 2224 3.295973 TGGGGTTCTTCTTCCAAAACAG 58.704 45.455 0.00 0.00 0.00 3.16
2062 2226 4.746535 TTTGGGGTTCTTCTTCCAAAAC 57.253 40.909 4.17 0.00 43.62 2.43
2087 2271 9.618890 CCATTTCCAGATCTGAACTAAGATTAA 57.381 33.333 24.62 4.45 37.03 1.40
2088 2283 8.772250 ACCATTTCCAGATCTGAACTAAGATTA 58.228 33.333 24.62 3.75 37.03 1.75
2139 2337 5.324784 TCATACTGACGTATTTGCTGACT 57.675 39.130 0.00 0.00 34.14 3.41
2158 2356 5.183140 GCCGCCTATACCATACAATTTTCAT 59.817 40.000 0.00 0.00 0.00 2.57
2170 2368 2.670019 TTCTCTAGCCGCCTATACCA 57.330 50.000 0.00 0.00 0.00 3.25
2171 2369 2.231721 CCTTTCTCTAGCCGCCTATACC 59.768 54.545 0.00 0.00 0.00 2.73
2230 2429 5.537300 ACTGTCATGACTTCACACTAAGT 57.463 39.130 25.55 14.35 42.36 2.24
2231 2430 5.406780 GGAACTGTCATGACTTCACACTAAG 59.593 44.000 25.55 13.74 0.00 2.18
2255 2454 2.190578 GACCGATCTGCCCCCAAG 59.809 66.667 0.00 0.00 0.00 3.61
2284 2483 4.536090 TGGACTTCAAACCATGACCTATCT 59.464 41.667 0.00 0.00 37.92 1.98
2317 2516 6.200475 GGCGGATACAAAGAATTGACTACTAC 59.800 42.308 0.00 0.00 38.94 2.73
2321 2534 5.128827 AGAGGCGGATACAAAGAATTGACTA 59.871 40.000 0.00 0.00 38.94 2.59
2331 2544 1.953311 GCCCAAAGAGGCGGATACAAA 60.953 52.381 0.00 0.00 44.57 2.83
2344 2561 4.009015 GGCTCCTTCTGCCCAAAG 57.991 61.111 0.00 0.00 44.32 2.77
2379 2596 5.440610 AGCAAGAGAGAAGACTTGGAAAAA 58.559 37.500 0.00 0.00 42.26 1.94
2399 2616 4.742438 GTTCGTAACCAATGAGAAAGCA 57.258 40.909 0.00 0.00 0.00 3.91
2411 2628 7.764331 ACAAAATATATTGTGGGTTCGTAACC 58.236 34.615 18.01 7.90 41.78 2.85
2455 2968 5.629435 CGACAAAACAAATAGCCCTTTCTTC 59.371 40.000 0.00 0.00 0.00 2.87
2462 2975 2.554893 TCCACGACAAAACAAATAGCCC 59.445 45.455 0.00 0.00 0.00 5.19
2528 3041 7.756722 CGGAATTCAAAAGAGAGCAAAACATAT 59.243 33.333 7.93 0.00 0.00 1.78
2529 3042 7.083858 CGGAATTCAAAAGAGAGCAAAACATA 58.916 34.615 7.93 0.00 0.00 2.29
2530 3043 5.922544 CGGAATTCAAAAGAGAGCAAAACAT 59.077 36.000 7.93 0.00 0.00 2.71
2532 3045 4.681483 CCGGAATTCAAAAGAGAGCAAAAC 59.319 41.667 7.93 0.00 0.00 2.43
2534 3047 3.888930 ACCGGAATTCAAAAGAGAGCAAA 59.111 39.130 9.46 0.00 0.00 3.68
2556 3272 6.090763 CGCACTTTTTATCAGTACTGTGATGA 59.909 38.462 21.99 3.41 37.72 2.92
2564 3280 4.403453 CAAGCCGCACTTTTTATCAGTAC 58.597 43.478 0.00 0.00 36.04 2.73
2569 3285 1.067915 TGGCAAGCCGCACTTTTTATC 60.068 47.619 6.60 0.00 45.17 1.75
2572 3522 0.965439 TATGGCAAGCCGCACTTTTT 59.035 45.000 6.60 0.00 45.17 1.94
2580 3535 3.823873 TGGGTTAATAATATGGCAAGCCG 59.176 43.478 6.60 0.00 39.14 5.52
2597 3552 9.592196 AACAGCAATAATCAGATTATATGGGTT 57.408 29.630 14.91 13.61 34.50 4.11
2637 3605 8.641498 ACAAAGATTTATCACAACTGAGGAAT 57.359 30.769 0.00 0.00 0.00 3.01
2639 3607 7.824289 CCTACAAAGATTTATCACAACTGAGGA 59.176 37.037 0.00 0.00 0.00 3.71
2640 3608 7.607991 ACCTACAAAGATTTATCACAACTGAGG 59.392 37.037 0.00 0.00 0.00 3.86
2643 3611 8.783093 TGAACCTACAAAGATTTATCACAACTG 58.217 33.333 0.00 0.00 0.00 3.16
2654 3622 6.891908 ACCTATGCAATGAACCTACAAAGATT 59.108 34.615 0.00 0.00 0.00 2.40
2656 3624 5.815581 ACCTATGCAATGAACCTACAAAGA 58.184 37.500 0.00 0.00 0.00 2.52
2673 3641 6.756221 ACTTTAGCCTAATACGGAACCTATG 58.244 40.000 0.00 0.00 0.00 2.23
2682 3650 4.750098 CCCATGTGACTTTAGCCTAATACG 59.250 45.833 0.00 0.00 0.00 3.06
2692 3660 5.192927 GTGATTGGATCCCATGTGACTTTA 58.807 41.667 9.90 0.00 31.53 1.85
2734 3716 0.253347 AGAAAGGCCCAGGAGATCCA 60.253 55.000 0.00 0.00 38.89 3.41
2807 3789 3.054139 TGATTGGGATTCAGGTGAGAAGG 60.054 47.826 0.00 0.00 0.00 3.46
2950 3941 8.289939 AGTTTGTTAGAGCATGAATGAATGAT 57.710 30.769 0.00 0.00 0.00 2.45
2951 3942 7.609146 AGAGTTTGTTAGAGCATGAATGAATGA 59.391 33.333 0.00 0.00 0.00 2.57
2952 3943 7.759465 AGAGTTTGTTAGAGCATGAATGAATG 58.241 34.615 0.00 0.00 0.00 2.67
3024 4015 3.204526 CCATTTTTGCTCTTGTTTGCCA 58.795 40.909 0.00 0.00 0.00 4.92
3035 4026 2.568509 CCTTGATGACCCCATTTTTGCT 59.431 45.455 0.00 0.00 32.09 3.91
3053 4044 6.945218 TGGCAATTGCATAGTTTTATTCCTT 58.055 32.000 30.32 0.00 44.36 3.36
3176 4204 0.179240 GCATGCACGTCGAGTCTTTG 60.179 55.000 14.21 0.00 0.00 2.77
3199 4227 5.184479 CACATCATGATCTTCCACCAGTTTT 59.816 40.000 4.86 0.00 0.00 2.43
3209 4237 3.311871 GCAGTGGTCACATCATGATCTTC 59.688 47.826 4.86 0.00 39.44 2.87
3263 4296 3.372897 TCTCATCTGTCCTCTGCAATCT 58.627 45.455 0.00 0.00 0.00 2.40
3264 4297 3.815856 TCTCATCTGTCCTCTGCAATC 57.184 47.619 0.00 0.00 0.00 2.67
3265 4298 3.071312 GGATCTCATCTGTCCTCTGCAAT 59.929 47.826 0.00 0.00 0.00 3.56
3266 4299 2.433604 GGATCTCATCTGTCCTCTGCAA 59.566 50.000 0.00 0.00 0.00 4.08
3267 4300 2.037901 GGATCTCATCTGTCCTCTGCA 58.962 52.381 0.00 0.00 0.00 4.41
3268 4301 2.037901 TGGATCTCATCTGTCCTCTGC 58.962 52.381 0.00 0.00 33.15 4.26
3269 4302 3.450096 TGTTGGATCTCATCTGTCCTCTG 59.550 47.826 0.00 0.00 33.15 3.35
3366 4399 9.671279 ATGTGATTGTCTGAGAAAATACATACA 57.329 29.630 13.80 10.39 0.00 2.29
3369 4402 9.107177 GAGATGTGATTGTCTGAGAAAATACAT 57.893 33.333 14.66 14.66 0.00 2.29
3386 4419 2.840038 TGGTACAAGCCAGAGATGTGAT 59.160 45.455 0.00 0.00 33.97 3.06
3406 4439 5.467035 AAAACATGTACAAACAGGGGATG 57.533 39.130 0.00 0.00 41.69 3.51
3438 4471 6.445357 ACAACAACTACCGACAAAAGAAAT 57.555 33.333 0.00 0.00 0.00 2.17
3442 4475 7.022384 TGTTTAACAACAACTACCGACAAAAG 58.978 34.615 0.00 0.00 40.10 2.27
3477 4665 6.417635 CACAGTATCTGCGATTTTGTTTTTGT 59.582 34.615 0.00 0.00 34.37 2.83
3478 4666 6.129115 CCACAGTATCTGCGATTTTGTTTTTG 60.129 38.462 0.00 0.00 34.37 2.44
3479 4667 5.920273 CCACAGTATCTGCGATTTTGTTTTT 59.080 36.000 0.00 0.00 34.37 1.94
3480 4668 5.240623 TCCACAGTATCTGCGATTTTGTTTT 59.759 36.000 0.00 0.00 34.37 2.43
3481 4669 4.759693 TCCACAGTATCTGCGATTTTGTTT 59.240 37.500 0.00 0.00 34.37 2.83
3482 4670 4.323417 TCCACAGTATCTGCGATTTTGTT 58.677 39.130 0.00 0.00 34.37 2.83
3483 4671 3.937814 TCCACAGTATCTGCGATTTTGT 58.062 40.909 0.00 0.85 34.37 2.83
3484 4672 4.571984 TCATCCACAGTATCTGCGATTTTG 59.428 41.667 0.00 0.34 34.37 2.44
3485 4673 4.769688 TCATCCACAGTATCTGCGATTTT 58.230 39.130 0.00 0.00 34.37 1.82
3486 4674 4.375272 CTCATCCACAGTATCTGCGATTT 58.625 43.478 0.00 0.00 34.37 2.17
3517 4706 6.136541 AGAAGAAAACTAAACAACTGCCTG 57.863 37.500 0.00 0.00 0.00 4.85
3518 4707 5.299531 GGAGAAGAAAACTAAACAACTGCCT 59.700 40.000 0.00 0.00 0.00 4.75
3584 4776 4.096984 GGATCTTCGCATTGATCTTTTGGT 59.903 41.667 0.00 0.00 39.09 3.67
3617 4809 2.674357 CGTCCGTATTTTAACCAGTGGG 59.326 50.000 15.21 0.00 41.29 4.61
3643 4835 2.014128 CCCATTGTACAAGGCCTAACG 58.986 52.381 14.66 0.00 0.00 3.18
3649 4841 1.678101 GCATCTCCCATTGTACAAGGC 59.322 52.381 14.66 0.00 0.00 4.35
3650 4842 3.287867 AGCATCTCCCATTGTACAAGG 57.712 47.619 14.65 13.92 0.00 3.61
3651 4843 5.674525 TCTAAGCATCTCCCATTGTACAAG 58.325 41.667 14.65 6.30 0.00 3.16
3652 4844 5.396772 CCTCTAAGCATCTCCCATTGTACAA 60.397 44.000 11.41 11.41 0.00 2.41
3653 4845 4.101585 CCTCTAAGCATCTCCCATTGTACA 59.898 45.833 0.00 0.00 0.00 2.90
3654 4846 4.503991 CCCTCTAAGCATCTCCCATTGTAC 60.504 50.000 0.00 0.00 0.00 2.90
3655 4847 3.648067 CCCTCTAAGCATCTCCCATTGTA 59.352 47.826 0.00 0.00 0.00 2.41
3656 4848 2.441001 CCCTCTAAGCATCTCCCATTGT 59.559 50.000 0.00 0.00 0.00 2.71
3657 4849 2.224719 CCCCTCTAAGCATCTCCCATTG 60.225 54.545 0.00 0.00 0.00 2.82
3658 4850 2.061061 CCCCTCTAAGCATCTCCCATT 58.939 52.381 0.00 0.00 0.00 3.16
3659 4851 1.061033 ACCCCTCTAAGCATCTCCCAT 60.061 52.381 0.00 0.00 0.00 4.00
3660 4852 0.343372 ACCCCTCTAAGCATCTCCCA 59.657 55.000 0.00 0.00 0.00 4.37
3661 4853 0.761802 CACCCCTCTAAGCATCTCCC 59.238 60.000 0.00 0.00 0.00 4.30
3662 4854 0.107643 GCACCCCTCTAAGCATCTCC 59.892 60.000 0.00 0.00 0.00 3.71
3663 4855 1.127343 AGCACCCCTCTAAGCATCTC 58.873 55.000 0.00 0.00 0.00 2.75
3664 4856 1.589414 AAGCACCCCTCTAAGCATCT 58.411 50.000 0.00 0.00 0.00 2.90
3665 4857 2.700897 TCTAAGCACCCCTCTAAGCATC 59.299 50.000 0.00 0.00 0.00 3.91
3666 4858 2.764269 TCTAAGCACCCCTCTAAGCAT 58.236 47.619 0.00 0.00 0.00 3.79
3667 4859 2.247699 TCTAAGCACCCCTCTAAGCA 57.752 50.000 0.00 0.00 0.00 3.91
3668 4860 3.629142 TTTCTAAGCACCCCTCTAAGC 57.371 47.619 0.00 0.00 0.00 3.09
3669 4861 8.459635 GTTTATTTTTCTAAGCACCCCTCTAAG 58.540 37.037 0.00 0.00 0.00 2.18
3670 4862 7.395206 GGTTTATTTTTCTAAGCACCCCTCTAA 59.605 37.037 0.00 0.00 0.00 2.10
3671 4863 6.888088 GGTTTATTTTTCTAAGCACCCCTCTA 59.112 38.462 0.00 0.00 0.00 2.43
3672 4864 5.715279 GGTTTATTTTTCTAAGCACCCCTCT 59.285 40.000 0.00 0.00 0.00 3.69
3673 4865 5.392703 CGGTTTATTTTTCTAAGCACCCCTC 60.393 44.000 0.00 0.00 0.00 4.30
3674 4866 4.461431 CGGTTTATTTTTCTAAGCACCCCT 59.539 41.667 0.00 0.00 0.00 4.79
3675 4867 4.460034 TCGGTTTATTTTTCTAAGCACCCC 59.540 41.667 0.00 0.00 0.00 4.95
3676 4868 5.413523 TCTCGGTTTATTTTTCTAAGCACCC 59.586 40.000 0.00 0.00 0.00 4.61
3677 4869 6.490566 TCTCGGTTTATTTTTCTAAGCACC 57.509 37.500 0.00 0.00 0.00 5.01
3678 4870 8.965986 AAATCTCGGTTTATTTTTCTAAGCAC 57.034 30.769 0.00 0.00 0.00 4.40
3679 4871 9.620660 GAAAATCTCGGTTTATTTTTCTAAGCA 57.379 29.630 0.00 0.00 35.87 3.91
3680 4872 9.841880 AGAAAATCTCGGTTTATTTTTCTAAGC 57.158 29.630 7.06 0.00 42.02 3.09
3686 4878 9.974980 TGCTTAAGAAAATCTCGGTTTATTTTT 57.025 25.926 6.67 0.00 35.87 1.94
3687 4879 9.406828 GTGCTTAAGAAAATCTCGGTTTATTTT 57.593 29.630 6.67 0.00 37.85 1.82
3688 4880 8.027189 GGTGCTTAAGAAAATCTCGGTTTATTT 58.973 33.333 6.67 0.00 0.00 1.40
3689 4881 7.535997 GGTGCTTAAGAAAATCTCGGTTTATT 58.464 34.615 6.67 0.00 0.00 1.40
3690 4882 6.183360 CGGTGCTTAAGAAAATCTCGGTTTAT 60.183 38.462 6.67 0.00 0.00 1.40
3691 4883 5.121142 CGGTGCTTAAGAAAATCTCGGTTTA 59.879 40.000 6.67 0.00 0.00 2.01
3692 4884 4.083484 CGGTGCTTAAGAAAATCTCGGTTT 60.083 41.667 6.67 0.00 0.00 3.27
3693 4885 3.435671 CGGTGCTTAAGAAAATCTCGGTT 59.564 43.478 6.67 0.00 0.00 4.44
3694 4886 3.000727 CGGTGCTTAAGAAAATCTCGGT 58.999 45.455 6.67 0.00 0.00 4.69
3695 4887 2.351726 CCGGTGCTTAAGAAAATCTCGG 59.648 50.000 6.67 5.23 0.00 4.63
3696 4888 3.000727 ACCGGTGCTTAAGAAAATCTCG 58.999 45.455 6.12 0.00 0.00 4.04
3697 4889 3.751698 ACACCGGTGCTTAAGAAAATCTC 59.248 43.478 34.26 0.00 0.00 2.75
3698 4890 3.751518 ACACCGGTGCTTAAGAAAATCT 58.248 40.909 34.26 7.12 0.00 2.40
3699 4891 3.751698 AGACACCGGTGCTTAAGAAAATC 59.248 43.478 34.26 19.11 0.00 2.17
3700 4892 3.751518 AGACACCGGTGCTTAAGAAAAT 58.248 40.909 34.26 10.84 0.00 1.82
3701 4893 3.202829 AGACACCGGTGCTTAAGAAAA 57.797 42.857 34.26 0.00 0.00 2.29
3702 4894 2.922740 AGACACCGGTGCTTAAGAAA 57.077 45.000 34.26 0.00 0.00 2.52
3703 4895 4.546829 AATAGACACCGGTGCTTAAGAA 57.453 40.909 34.26 16.00 0.00 2.52
3704 4896 4.222145 AGAAATAGACACCGGTGCTTAAGA 59.778 41.667 34.26 16.34 0.00 2.10
3705 4897 4.504858 AGAAATAGACACCGGTGCTTAAG 58.495 43.478 34.26 10.42 0.00 1.85
3706 4898 4.546829 AGAAATAGACACCGGTGCTTAA 57.453 40.909 34.26 17.52 0.00 1.85
3707 4899 4.463539 TGTAGAAATAGACACCGGTGCTTA 59.536 41.667 34.26 25.02 0.00 3.09
3708 4900 3.259876 TGTAGAAATAGACACCGGTGCTT 59.740 43.478 34.26 23.70 0.00 3.91
3709 4901 2.829720 TGTAGAAATAGACACCGGTGCT 59.170 45.455 34.26 29.94 0.00 4.40
3710 4902 3.187700 CTGTAGAAATAGACACCGGTGC 58.812 50.000 34.26 25.13 0.00 5.01
3711 4903 3.446161 TCCTGTAGAAATAGACACCGGTG 59.554 47.826 32.83 32.83 0.00 4.94
3712 4904 3.700038 CTCCTGTAGAAATAGACACCGGT 59.300 47.826 0.00 0.00 0.00 5.28
3713 4905 3.952323 TCTCCTGTAGAAATAGACACCGG 59.048 47.826 0.00 0.00 0.00 5.28
3714 4906 4.882427 TCTCTCCTGTAGAAATAGACACCG 59.118 45.833 0.00 0.00 32.46 4.94
3715 4907 5.220892 CGTCTCTCCTGTAGAAATAGACACC 60.221 48.000 0.00 0.00 32.30 4.16
3716 4908 5.731126 GCGTCTCTCCTGTAGAAATAGACAC 60.731 48.000 0.00 0.00 32.30 3.67
3717 4909 4.335874 GCGTCTCTCCTGTAGAAATAGACA 59.664 45.833 0.00 0.00 32.30 3.41
3718 4910 4.577283 AGCGTCTCTCCTGTAGAAATAGAC 59.423 45.833 0.00 0.00 32.46 2.59
3719 4911 4.783055 AGCGTCTCTCCTGTAGAAATAGA 58.217 43.478 0.00 0.00 32.46 1.98
3720 4912 5.508200 AAGCGTCTCTCCTGTAGAAATAG 57.492 43.478 0.00 0.00 32.46 1.73
3721 4913 6.120905 ACTAAGCGTCTCTCCTGTAGAAATA 58.879 40.000 0.00 0.00 32.46 1.40
3722 4914 4.951094 ACTAAGCGTCTCTCCTGTAGAAAT 59.049 41.667 0.00 0.00 32.46 2.17
3723 4915 4.333690 ACTAAGCGTCTCTCCTGTAGAAA 58.666 43.478 0.00 0.00 32.46 2.52
3724 4916 3.952931 ACTAAGCGTCTCTCCTGTAGAA 58.047 45.455 0.00 0.00 32.46 2.10
3725 4917 3.630892 ACTAAGCGTCTCTCCTGTAGA 57.369 47.619 0.00 0.00 0.00 2.59
3726 4918 5.812652 CTTAACTAAGCGTCTCTCCTGTAG 58.187 45.833 0.00 0.00 0.00 2.74
3727 4919 5.814764 CTTAACTAAGCGTCTCTCCTGTA 57.185 43.478 0.00 0.00 0.00 2.74
3728 4920 4.705337 CTTAACTAAGCGTCTCTCCTGT 57.295 45.455 0.00 0.00 0.00 4.00
3740 4932 6.561614 TGAACAGGATAGACGCTTAACTAAG 58.438 40.000 0.00 0.00 36.40 2.18
3741 4933 6.519679 TGAACAGGATAGACGCTTAACTAA 57.480 37.500 0.00 0.00 0.00 2.24
3742 4934 6.519679 TTGAACAGGATAGACGCTTAACTA 57.480 37.500 0.00 0.00 0.00 2.24
3743 4935 5.401531 TTGAACAGGATAGACGCTTAACT 57.598 39.130 0.00 0.00 0.00 2.24
3744 4936 6.663944 ATTTGAACAGGATAGACGCTTAAC 57.336 37.500 0.00 0.00 0.00 2.01
3745 4937 7.011109 GCTTATTTGAACAGGATAGACGCTTAA 59.989 37.037 0.00 0.00 0.00 1.85
3746 4938 6.479001 GCTTATTTGAACAGGATAGACGCTTA 59.521 38.462 0.00 0.00 0.00 3.09
3747 4939 5.294552 GCTTATTTGAACAGGATAGACGCTT 59.705 40.000 0.00 0.00 0.00 4.68
3748 4940 4.811557 GCTTATTTGAACAGGATAGACGCT 59.188 41.667 0.00 0.00 0.00 5.07
3749 4941 4.570772 TGCTTATTTGAACAGGATAGACGC 59.429 41.667 0.00 0.00 0.00 5.19
3750 4942 5.006746 GGTGCTTATTTGAACAGGATAGACG 59.993 44.000 0.00 0.00 0.00 4.18
3751 4943 5.006746 CGGTGCTTATTTGAACAGGATAGAC 59.993 44.000 0.00 0.00 0.00 2.59
3752 4944 5.105106 TCGGTGCTTATTTGAACAGGATAGA 60.105 40.000 0.00 0.00 0.00 1.98
3753 4945 5.116180 TCGGTGCTTATTTGAACAGGATAG 58.884 41.667 0.00 0.00 0.00 2.08
3754 4946 5.092554 TCGGTGCTTATTTGAACAGGATA 57.907 39.130 0.00 0.00 0.00 2.59
3755 4947 3.950397 TCGGTGCTTATTTGAACAGGAT 58.050 40.909 0.00 0.00 0.00 3.24
3756 4948 3.410631 TCGGTGCTTATTTGAACAGGA 57.589 42.857 0.00 0.00 0.00 3.86
3757 4949 4.019919 CATCGGTGCTTATTTGAACAGG 57.980 45.455 0.00 0.00 0.00 4.00
3771 4963 4.142816 CCAGACTTTTCTTAAGCATCGGTG 60.143 45.833 0.00 0.00 0.00 4.94
3772 4964 4.003648 CCAGACTTTTCTTAAGCATCGGT 58.996 43.478 0.00 0.00 0.00 4.69
3773 4965 4.003648 ACCAGACTTTTCTTAAGCATCGG 58.996 43.478 0.00 0.77 0.00 4.18
3774 4966 5.613358 AACCAGACTTTTCTTAAGCATCG 57.387 39.130 0.00 0.00 0.00 3.84
3775 4967 9.914131 AAATAAACCAGACTTTTCTTAAGCATC 57.086 29.630 0.00 0.00 0.00 3.91
3776 4968 9.914131 GAAATAAACCAGACTTTTCTTAAGCAT 57.086 29.630 0.00 0.00 0.00 3.79
3777 4969 9.131791 AGAAATAAACCAGACTTTTCTTAAGCA 57.868 29.630 0.00 0.00 33.97 3.91
3778 4970 9.613957 GAGAAATAAACCAGACTTTTCTTAAGC 57.386 33.333 0.00 0.00 36.91 3.09
3783 4975 9.004717 GCTTAGAGAAATAAACCAGACTTTTCT 57.995 33.333 0.00 0.00 38.86 2.52
3784 4976 8.784043 TGCTTAGAGAAATAAACCAGACTTTTC 58.216 33.333 0.00 0.00 0.00 2.29
3785 4977 8.568794 GTGCTTAGAGAAATAAACCAGACTTTT 58.431 33.333 0.00 0.00 0.00 2.27
3786 4978 7.175119 GGTGCTTAGAGAAATAAACCAGACTTT 59.825 37.037 0.00 0.00 0.00 2.66
3787 4979 6.655425 GGTGCTTAGAGAAATAAACCAGACTT 59.345 38.462 0.00 0.00 0.00 3.01
3788 4980 6.013293 AGGTGCTTAGAGAAATAAACCAGACT 60.013 38.462 0.00 0.00 0.00 3.24
3789 4981 6.174049 AGGTGCTTAGAGAAATAAACCAGAC 58.826 40.000 0.00 0.00 0.00 3.51
3790 4982 6.374417 AGGTGCTTAGAGAAATAAACCAGA 57.626 37.500 0.00 0.00 0.00 3.86
3791 4983 5.586643 GGAGGTGCTTAGAGAAATAAACCAG 59.413 44.000 0.00 0.00 0.00 4.00
3792 4984 5.497474 GGAGGTGCTTAGAGAAATAAACCA 58.503 41.667 0.00 0.00 0.00 3.67
3793 4985 4.882427 GGGAGGTGCTTAGAGAAATAAACC 59.118 45.833 0.00 0.00 0.00 3.27
3794 4986 5.497474 TGGGAGGTGCTTAGAGAAATAAAC 58.503 41.667 0.00 0.00 0.00 2.01
3795 4987 5.772393 TGGGAGGTGCTTAGAGAAATAAA 57.228 39.130 0.00 0.00 0.00 1.40
3796 4988 5.975988 ATGGGAGGTGCTTAGAGAAATAA 57.024 39.130 0.00 0.00 0.00 1.40
3797 4989 5.191722 ACAATGGGAGGTGCTTAGAGAAATA 59.808 40.000 0.00 0.00 0.00 1.40
3798 4990 4.018050 ACAATGGGAGGTGCTTAGAGAAAT 60.018 41.667 0.00 0.00 0.00 2.17
3799 4991 3.330701 ACAATGGGAGGTGCTTAGAGAAA 59.669 43.478 0.00 0.00 0.00 2.52
3800 4992 2.912956 ACAATGGGAGGTGCTTAGAGAA 59.087 45.455 0.00 0.00 0.00 2.87
3801 4993 2.551270 ACAATGGGAGGTGCTTAGAGA 58.449 47.619 0.00 0.00 0.00 3.10
3802 4994 3.197766 TGTACAATGGGAGGTGCTTAGAG 59.802 47.826 0.00 0.00 0.00 2.43
3803 4995 3.178046 TGTACAATGGGAGGTGCTTAGA 58.822 45.455 0.00 0.00 0.00 2.10
3804 4996 3.627395 TGTACAATGGGAGGTGCTTAG 57.373 47.619 0.00 0.00 0.00 2.18
3805 4997 3.308117 CCTTGTACAATGGGAGGTGCTTA 60.308 47.826 9.13 0.00 0.00 3.09
3806 4998 2.555227 CCTTGTACAATGGGAGGTGCTT 60.555 50.000 9.13 0.00 0.00 3.91
3807 4999 1.004745 CCTTGTACAATGGGAGGTGCT 59.995 52.381 9.13 0.00 0.00 4.40
3808 5000 1.463674 CCTTGTACAATGGGAGGTGC 58.536 55.000 9.13 0.00 0.00 5.01
3809 5001 1.463674 GCCTTGTACAATGGGAGGTG 58.536 55.000 16.08 0.00 0.00 4.00
3810 5002 0.331616 GGCCTTGTACAATGGGAGGT 59.668 55.000 16.08 0.00 0.00 3.85
3811 5003 0.625849 AGGCCTTGTACAATGGGAGG 59.374 55.000 16.08 11.34 0.00 4.30
3812 5004 2.514458 AAGGCCTTGTACAATGGGAG 57.486 50.000 19.73 1.65 0.00 4.30
3813 5005 3.054655 GTCTAAGGCCTTGTACAATGGGA 60.055 47.826 28.77 2.40 0.00 4.37
3814 5006 3.054361 AGTCTAAGGCCTTGTACAATGGG 60.054 47.826 28.77 14.91 0.00 4.00
3815 5007 3.941483 CAGTCTAAGGCCTTGTACAATGG 59.059 47.826 28.77 13.26 0.00 3.16
3816 5008 4.832248 TCAGTCTAAGGCCTTGTACAATG 58.168 43.478 28.77 18.28 0.00 2.82
3817 5009 5.189736 TCATCAGTCTAAGGCCTTGTACAAT 59.810 40.000 28.77 17.72 0.00 2.71
3818 5010 4.530553 TCATCAGTCTAAGGCCTTGTACAA 59.469 41.667 28.77 16.43 0.00 2.41
3819 5011 4.093743 TCATCAGTCTAAGGCCTTGTACA 58.906 43.478 28.77 6.91 0.00 2.90
3820 5012 4.737855 TCATCAGTCTAAGGCCTTGTAC 57.262 45.455 28.77 23.28 0.00 2.90
3821 5013 5.957771 AATCATCAGTCTAAGGCCTTGTA 57.042 39.130 28.77 12.88 0.00 2.41
3822 5014 4.851639 AATCATCAGTCTAAGGCCTTGT 57.148 40.909 28.77 4.97 0.00 3.16
3823 5015 4.946157 ACAAATCATCAGTCTAAGGCCTTG 59.054 41.667 28.77 17.30 0.00 3.61
3824 5016 5.184892 ACAAATCATCAGTCTAAGGCCTT 57.815 39.130 24.18 24.18 0.00 4.35
3825 5017 4.851639 ACAAATCATCAGTCTAAGGCCT 57.148 40.909 0.00 0.00 0.00 5.19
3826 5018 4.943705 TGAACAAATCATCAGTCTAAGGCC 59.056 41.667 0.00 0.00 31.50 5.19
3827 5019 6.500684 TTGAACAAATCATCAGTCTAAGGC 57.499 37.500 0.00 0.00 38.03 4.35
3828 5020 8.733458 TCATTTGAACAAATCATCAGTCTAAGG 58.267 33.333 9.42 0.00 38.84 2.69
3832 5024 9.419297 CATTTCATTTGAACAAATCATCAGTCT 57.581 29.630 9.42 0.00 38.84 3.24
3833 5025 8.653338 CCATTTCATTTGAACAAATCATCAGTC 58.347 33.333 9.42 0.00 38.84 3.51
3834 5026 8.369424 TCCATTTCATTTGAACAAATCATCAGT 58.631 29.630 9.42 0.00 38.84 3.41
3835 5027 8.766000 TCCATTTCATTTGAACAAATCATCAG 57.234 30.769 9.42 0.40 38.84 2.90
3836 5028 7.332430 GCTCCATTTCATTTGAACAAATCATCA 59.668 33.333 9.42 0.00 38.84 3.07
3837 5029 7.463648 CGCTCCATTTCATTTGAACAAATCATC 60.464 37.037 9.42 0.00 38.84 2.92
3838 5030 6.311935 CGCTCCATTTCATTTGAACAAATCAT 59.688 34.615 9.42 1.53 38.84 2.45
3839 5031 5.634439 CGCTCCATTTCATTTGAACAAATCA 59.366 36.000 9.42 0.00 38.84 2.57
3840 5032 5.863397 TCGCTCCATTTCATTTGAACAAATC 59.137 36.000 9.42 0.00 38.84 2.17
3841 5033 5.782047 TCGCTCCATTTCATTTGAACAAAT 58.218 33.333 6.91 6.91 41.33 2.32
3842 5034 5.193663 TCGCTCCATTTCATTTGAACAAA 57.806 34.783 2.48 2.48 33.13 2.83
3843 5035 4.844998 TCGCTCCATTTCATTTGAACAA 57.155 36.364 0.00 0.00 33.13 2.83
3844 5036 4.844998 TTCGCTCCATTTCATTTGAACA 57.155 36.364 0.00 0.00 33.13 3.18
3845 5037 5.920273 TCTTTTCGCTCCATTTCATTTGAAC 59.080 36.000 0.00 0.00 33.13 3.18
3846 5038 6.083098 TCTTTTCGCTCCATTTCATTTGAA 57.917 33.333 0.00 0.00 0.00 2.69
3847 5039 5.335897 CCTCTTTTCGCTCCATTTCATTTGA 60.336 40.000 0.00 0.00 0.00 2.69
3848 5040 4.860907 CCTCTTTTCGCTCCATTTCATTTG 59.139 41.667 0.00 0.00 0.00 2.32
3849 5041 4.766891 TCCTCTTTTCGCTCCATTTCATTT 59.233 37.500 0.00 0.00 0.00 2.32
3850 5042 4.335416 TCCTCTTTTCGCTCCATTTCATT 58.665 39.130 0.00 0.00 0.00 2.57
3851 5043 3.944015 CTCCTCTTTTCGCTCCATTTCAT 59.056 43.478 0.00 0.00 0.00 2.57
3852 5044 3.007940 TCTCCTCTTTTCGCTCCATTTCA 59.992 43.478 0.00 0.00 0.00 2.69
3853 5045 3.600388 TCTCCTCTTTTCGCTCCATTTC 58.400 45.455 0.00 0.00 0.00 2.17
3854 5046 3.703001 TCTCCTCTTTTCGCTCCATTT 57.297 42.857 0.00 0.00 0.00 2.32
3855 5047 3.922171 ATCTCCTCTTTTCGCTCCATT 57.078 42.857 0.00 0.00 0.00 3.16
3856 5048 3.922171 AATCTCCTCTTTTCGCTCCAT 57.078 42.857 0.00 0.00 0.00 3.41
3857 5049 3.769844 ACTAATCTCCTCTTTTCGCTCCA 59.230 43.478 0.00 0.00 0.00 3.86
3858 5050 4.394439 ACTAATCTCCTCTTTTCGCTCC 57.606 45.455 0.00 0.00 0.00 4.70
3859 5051 6.729391 AAAACTAATCTCCTCTTTTCGCTC 57.271 37.500 0.00 0.00 0.00 5.03
3885 5077 9.862371 GAACTAATCTCTCATTTCACTGTCTTA 57.138 33.333 0.00 0.00 0.00 2.10
3886 5078 8.370940 TGAACTAATCTCTCATTTCACTGTCTT 58.629 33.333 0.00 0.00 0.00 3.01
3887 5079 7.901029 TGAACTAATCTCTCATTTCACTGTCT 58.099 34.615 0.00 0.00 0.00 3.41
3888 5080 8.439286 GTTGAACTAATCTCTCATTTCACTGTC 58.561 37.037 0.00 0.00 0.00 3.51
3889 5081 7.933577 TGTTGAACTAATCTCTCATTTCACTGT 59.066 33.333 0.00 0.00 0.00 3.55
3890 5082 8.315391 TGTTGAACTAATCTCTCATTTCACTG 57.685 34.615 0.00 0.00 0.00 3.66
3891 5083 8.370940 TCTGTTGAACTAATCTCTCATTTCACT 58.629 33.333 0.00 0.00 0.00 3.41
3892 5084 8.539770 TCTGTTGAACTAATCTCTCATTTCAC 57.460 34.615 0.00 0.00 0.00 3.18
3893 5085 9.159364 CATCTGTTGAACTAATCTCTCATTTCA 57.841 33.333 0.00 0.00 0.00 2.69
3894 5086 8.610896 CCATCTGTTGAACTAATCTCTCATTTC 58.389 37.037 0.00 0.00 0.00 2.17
3895 5087 8.105829 ACCATCTGTTGAACTAATCTCTCATTT 58.894 33.333 0.00 0.00 0.00 2.32
3896 5088 7.551974 CACCATCTGTTGAACTAATCTCTCATT 59.448 37.037 0.00 0.00 0.00 2.57
3897 5089 7.046652 CACCATCTGTTGAACTAATCTCTCAT 58.953 38.462 0.00 0.00 0.00 2.90
3898 5090 6.401394 CACCATCTGTTGAACTAATCTCTCA 58.599 40.000 0.00 0.00 0.00 3.27
3899 5091 5.293079 GCACCATCTGTTGAACTAATCTCTC 59.707 44.000 0.00 0.00 0.00 3.20
3900 5092 5.046014 AGCACCATCTGTTGAACTAATCTCT 60.046 40.000 0.00 0.00 0.00 3.10
3901 5093 5.064452 CAGCACCATCTGTTGAACTAATCTC 59.936 44.000 0.00 0.00 32.93 2.75
3902 5094 4.940046 CAGCACCATCTGTTGAACTAATCT 59.060 41.667 0.00 0.00 32.93 2.40
3903 5095 4.437930 GCAGCACCATCTGTTGAACTAATC 60.438 45.833 0.00 0.00 32.93 1.75
3904 5096 3.441572 GCAGCACCATCTGTTGAACTAAT 59.558 43.478 0.00 0.00 32.93 1.73
3905 5097 2.813754 GCAGCACCATCTGTTGAACTAA 59.186 45.455 0.00 0.00 32.93 2.24
3906 5098 2.038952 AGCAGCACCATCTGTTGAACTA 59.961 45.455 0.00 0.00 32.93 2.24
3907 5099 1.202855 AGCAGCACCATCTGTTGAACT 60.203 47.619 0.00 0.00 32.93 3.01
3908 5100 1.242076 AGCAGCACCATCTGTTGAAC 58.758 50.000 0.00 0.00 32.93 3.18
3909 5101 1.985473 AAGCAGCACCATCTGTTGAA 58.015 45.000 0.00 0.00 32.93 2.69
3910 5102 1.985473 AAAGCAGCACCATCTGTTGA 58.015 45.000 0.00 0.00 32.93 3.18
3911 5103 2.223876 ACAAAAGCAGCACCATCTGTTG 60.224 45.455 0.00 0.00 36.49 3.33
3912 5104 2.034124 ACAAAAGCAGCACCATCTGTT 58.966 42.857 0.00 0.00 36.49 3.16
3913 5105 1.696063 ACAAAAGCAGCACCATCTGT 58.304 45.000 0.00 0.00 36.49 3.41
3914 5106 4.637534 AGTATACAAAAGCAGCACCATCTG 59.362 41.667 5.50 0.00 37.15 2.90
3915 5107 4.848357 AGTATACAAAAGCAGCACCATCT 58.152 39.130 5.50 0.00 0.00 2.90
3916 5108 6.677781 TTAGTATACAAAAGCAGCACCATC 57.322 37.500 5.50 0.00 0.00 3.51
3917 5109 7.339212 TCAATTAGTATACAAAAGCAGCACCAT 59.661 33.333 5.50 0.00 0.00 3.55
3918 5110 6.657117 TCAATTAGTATACAAAAGCAGCACCA 59.343 34.615 5.50 0.00 0.00 4.17
3919 5111 7.083875 TCAATTAGTATACAAAAGCAGCACC 57.916 36.000 5.50 0.00 0.00 5.01
3934 5126 9.929180 GTCCATGCACTAGATAATCAATTAGTA 57.071 33.333 0.00 0.00 0.00 1.82
3935 5127 7.880195 GGTCCATGCACTAGATAATCAATTAGT 59.120 37.037 0.00 0.00 0.00 2.24
3936 5128 7.335422 GGGTCCATGCACTAGATAATCAATTAG 59.665 40.741 0.00 0.00 0.00 1.73
3937 5129 7.168219 GGGTCCATGCACTAGATAATCAATTA 58.832 38.462 0.00 0.00 0.00 1.40
3938 5130 6.006449 GGGTCCATGCACTAGATAATCAATT 58.994 40.000 0.00 0.00 0.00 2.32
3939 5131 5.073554 TGGGTCCATGCACTAGATAATCAAT 59.926 40.000 0.00 0.00 0.00 2.57
3940 5132 4.411869 TGGGTCCATGCACTAGATAATCAA 59.588 41.667 0.00 0.00 0.00 2.57
3941 5133 3.973305 TGGGTCCATGCACTAGATAATCA 59.027 43.478 0.00 0.00 0.00 2.57
3942 5134 4.623932 TGGGTCCATGCACTAGATAATC 57.376 45.455 0.00 0.00 0.00 1.75
3943 5135 4.747931 GCTTGGGTCCATGCACTAGATAAT 60.748 45.833 19.03 0.00 43.68 1.28
3944 5136 3.433598 GCTTGGGTCCATGCACTAGATAA 60.434 47.826 19.03 0.00 43.68 1.75
3945 5137 2.104792 GCTTGGGTCCATGCACTAGATA 59.895 50.000 19.03 0.00 43.68 1.98
3946 5138 1.133976 GCTTGGGTCCATGCACTAGAT 60.134 52.381 19.03 0.00 43.68 1.98
3947 5139 0.253044 GCTTGGGTCCATGCACTAGA 59.747 55.000 19.03 0.00 43.68 2.43
3948 5140 2.785868 GCTTGGGTCCATGCACTAG 58.214 57.895 19.03 2.14 43.68 2.57
3953 5145 0.743097 GATTCTGCTTGGGTCCATGC 59.257 55.000 17.65 17.65 44.24 4.06
3954 5146 2.431954 AGATTCTGCTTGGGTCCATG 57.568 50.000 0.00 0.00 0.00 3.66
3955 5147 2.158696 GCTAGATTCTGCTTGGGTCCAT 60.159 50.000 0.00 0.00 0.00 3.41
3956 5148 1.210478 GCTAGATTCTGCTTGGGTCCA 59.790 52.381 0.00 0.00 0.00 4.02
3957 5149 1.475930 GGCTAGATTCTGCTTGGGTCC 60.476 57.143 0.00 0.00 0.00 4.46
3958 5150 1.808133 CGGCTAGATTCTGCTTGGGTC 60.808 57.143 0.00 0.00 0.00 4.46
3959 5151 0.179000 CGGCTAGATTCTGCTTGGGT 59.821 55.000 0.00 0.00 0.00 4.51
3960 5152 0.179000 ACGGCTAGATTCTGCTTGGG 59.821 55.000 0.00 0.00 0.00 4.12
3961 5153 2.029838 AACGGCTAGATTCTGCTTGG 57.970 50.000 0.00 0.00 0.00 3.61
3962 5154 3.000322 CGTAAACGGCTAGATTCTGCTTG 60.000 47.826 0.00 0.00 35.37 4.01
3963 5155 3.119245 TCGTAAACGGCTAGATTCTGCTT 60.119 43.478 2.24 0.00 40.29 3.91
3964 5156 2.426024 TCGTAAACGGCTAGATTCTGCT 59.574 45.455 2.24 0.00 40.29 4.24
3965 5157 2.805845 TCGTAAACGGCTAGATTCTGC 58.194 47.619 2.24 0.00 40.29 4.26
3966 5158 4.804139 ACAATCGTAAACGGCTAGATTCTG 59.196 41.667 2.24 0.00 40.29 3.02
3967 5159 5.007385 ACAATCGTAAACGGCTAGATTCT 57.993 39.130 2.24 0.00 40.29 2.40
3968 5160 6.817270 TTACAATCGTAAACGGCTAGATTC 57.183 37.500 2.24 0.00 40.29 2.52
3969 5161 6.982141 TGATTACAATCGTAAACGGCTAGATT 59.018 34.615 2.24 0.00 40.89 2.40
3970 5162 6.509656 TGATTACAATCGTAAACGGCTAGAT 58.490 36.000 2.24 0.00 40.89 1.98
3971 5163 5.893687 TGATTACAATCGTAAACGGCTAGA 58.106 37.500 2.24 0.00 40.89 2.43
3972 5164 6.764877 ATGATTACAATCGTAAACGGCTAG 57.235 37.500 2.24 0.00 40.89 3.42
3973 5165 7.428020 ACTATGATTACAATCGTAAACGGCTA 58.572 34.615 2.24 0.00 40.89 3.93
3974 5166 6.278363 ACTATGATTACAATCGTAAACGGCT 58.722 36.000 2.24 0.00 40.89 5.52
3975 5167 6.520792 ACTATGATTACAATCGTAAACGGC 57.479 37.500 2.24 0.00 40.89 5.68
3976 5168 6.129273 CCGACTATGATTACAATCGTAAACGG 60.129 42.308 20.85 20.85 42.20 4.44
3977 5169 6.634035 TCCGACTATGATTACAATCGTAAACG 59.366 38.462 15.18 15.18 40.89 3.60
3978 5170 7.919313 TCCGACTATGATTACAATCGTAAAC 57.081 36.000 5.61 2.93 40.89 2.01
3979 5171 8.354426 TCATCCGACTATGATTACAATCGTAAA 58.646 33.333 5.61 0.00 40.89 2.01
3980 5172 7.878036 TCATCCGACTATGATTACAATCGTAA 58.122 34.615 5.61 0.00 41.73 3.18
3981 5173 7.443259 TCATCCGACTATGATTACAATCGTA 57.557 36.000 4.31 4.31 38.26 3.43
3982 5174 6.327279 TCATCCGACTATGATTACAATCGT 57.673 37.500 2.45 2.45 38.26 3.73
3983 5175 8.911247 TTATCATCCGACTATGATTACAATCG 57.089 34.615 11.45 0.00 42.63 3.34
3984 5176 9.307121 CCTTATCATCCGACTATGATTACAATC 57.693 37.037 11.45 0.00 42.63 2.67
3985 5177 9.035890 TCCTTATCATCCGACTATGATTACAAT 57.964 33.333 11.45 0.00 42.63 2.71
3986 5178 8.417273 TCCTTATCATCCGACTATGATTACAA 57.583 34.615 11.45 2.77 42.63 2.41
3987 5179 8.304596 GTTCCTTATCATCCGACTATGATTACA 58.695 37.037 11.45 0.00 42.63 2.41
3988 5180 8.524487 AGTTCCTTATCATCCGACTATGATTAC 58.476 37.037 11.45 5.42 42.63 1.89
3989 5181 8.651589 AGTTCCTTATCATCCGACTATGATTA 57.348 34.615 11.45 4.39 42.63 1.75
3990 5182 7.546250 AGTTCCTTATCATCCGACTATGATT 57.454 36.000 11.45 0.60 42.63 2.57
3991 5183 7.546250 AAGTTCCTTATCATCCGACTATGAT 57.454 36.000 11.10 11.10 46.05 2.45
3992 5184 6.978674 AAGTTCCTTATCATCCGACTATGA 57.021 37.500 0.00 0.00 40.07 2.15
3993 5185 9.542462 TTTAAAGTTCCTTATCATCCGACTATG 57.458 33.333 0.00 0.00 0.00 2.23
4034 5226 1.068333 CAAATGGCAGGTGAACGGAAG 60.068 52.381 0.00 0.00 0.00 3.46
4035 5227 0.958091 CAAATGGCAGGTGAACGGAA 59.042 50.000 0.00 0.00 0.00 4.30
4036 5228 0.109532 TCAAATGGCAGGTGAACGGA 59.890 50.000 0.00 0.00 0.00 4.69
4037 5229 0.523072 CTCAAATGGCAGGTGAACGG 59.477 55.000 4.66 0.00 0.00 4.44
4038 5230 1.238439 ACTCAAATGGCAGGTGAACG 58.762 50.000 4.66 0.00 0.00 3.95
4039 5231 4.798574 CTTAACTCAAATGGCAGGTGAAC 58.201 43.478 4.66 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.