Multiple sequence alignment - TraesCS4D01G098100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G098100 chr4D 100.000 6720 0 0 1 6720 74614100 74607381 0.000000e+00 12410.0
1 TraesCS4D01G098100 chr4D 93.995 433 18 4 3246 3674 74610807 74610379 0.000000e+00 649.0
2 TraesCS4D01G098100 chr4D 93.995 433 18 4 3294 3722 74610855 74610427 0.000000e+00 649.0
3 TraesCS4D01G098100 chr4D 91.135 282 23 2 1309 1590 76231326 76231047 1.370000e-101 381.0
4 TraesCS4D01G098100 chr4D 94.000 100 6 0 6402 6501 274741044 274740945 1.170000e-32 152.0
5 TraesCS4D01G098100 chr4A 93.852 3123 141 25 534 3625 513082334 513085436 0.000000e+00 4656.0
6 TraesCS4D01G098100 chr4A 94.350 2478 87 17 3342 5769 513085054 513087528 0.000000e+00 3751.0
7 TraesCS4D01G098100 chr4A 87.684 544 41 14 1 541 513080747 513081267 1.600000e-170 610.0
8 TraesCS4D01G098100 chr4A 87.868 272 24 6 950 1215 676926342 676926610 1.820000e-80 311.0
9 TraesCS4D01G098100 chr4A 94.565 184 10 0 3246 3429 513085246 513085429 1.100000e-72 285.0
10 TraesCS4D01G098100 chr4A 93.706 143 9 0 3246 3388 513085294 513085436 1.470000e-51 215.0
11 TraesCS4D01G098100 chr4A 83.108 148 15 6 1748 1892 676927119 676927259 7.070000e-25 126.0
12 TraesCS4D01G098100 chr4A 90.805 87 7 1 6634 6720 513088313 513088398 1.530000e-21 115.0
13 TraesCS4D01G098100 chr4B 95.814 2556 70 9 3246 5771 106974551 106972003 0.000000e+00 4093.0
14 TraesCS4D01G098100 chr4B 95.615 1756 58 8 1970 3722 106975859 106974120 0.000000e+00 2798.0
15 TraesCS4D01G098100 chr4B 90.308 1527 83 30 426 1911 106977563 106976061 0.000000e+00 1940.0
16 TraesCS4D01G098100 chr4B 94.688 433 18 3 3294 3722 106974599 106974168 0.000000e+00 667.0
17 TraesCS4D01G098100 chr4B 92.396 434 26 5 3246 3674 106974503 106974072 4.450000e-171 612.0
18 TraesCS4D01G098100 chr4B 94.286 385 17 3 3342 3722 106974599 106974216 9.710000e-163 584.0
19 TraesCS4D01G098100 chr4B 89.663 416 33 10 1 410 106978250 106977839 7.720000e-144 521.0
20 TraesCS4D01G098100 chr4B 88.208 424 40 6 5804 6224 106971944 106971528 1.300000e-136 497.0
21 TraesCS4D01G098100 chr4B 87.685 406 48 2 1 405 106981980 106981576 7.890000e-129 472.0
22 TraesCS4D01G098100 chr4B 87.685 406 44 3 1 405 106985724 106985324 1.020000e-127 468.0
23 TraesCS4D01G098100 chr4B 85.393 445 25 17 426 837 106981282 106980845 6.230000e-115 425.0
24 TraesCS4D01G098100 chr4B 83.857 446 36 13 426 839 106985031 106984590 6.320000e-105 392.0
25 TraesCS4D01G098100 chr4B 97.872 47 1 0 951 997 672981421 672981467 1.550000e-11 82.4
26 TraesCS4D01G098100 chr7D 92.832 279 19 1 1305 1583 572475444 572475721 2.920000e-108 403.0
27 TraesCS4D01G098100 chr7D 90.877 285 23 3 1306 1590 54880853 54881134 4.920000e-101 379.0
28 TraesCS4D01G098100 chr7D 90.526 285 24 3 1306 1590 54865438 54865719 2.290000e-99 374.0
29 TraesCS4D01G098100 chr6D 91.756 279 21 2 1305 1583 61990209 61990485 2.940000e-103 387.0
30 TraesCS4D01G098100 chr6D 95.876 97 4 0 6402 6498 91559534 91559630 2.510000e-34 158.0
31 TraesCS4D01G098100 chr6D 85.577 104 8 5 1748 1851 61990526 61990622 1.190000e-17 102.0
32 TraesCS4D01G098100 chr2A 91.756 279 22 1 1305 1583 59582846 59583123 2.940000e-103 387.0
33 TraesCS4D01G098100 chr2A 83.108 148 15 6 1748 1892 59583164 59583304 7.070000e-25 126.0
34 TraesCS4D01G098100 chr5D 91.135 282 22 3 1309 1590 556478512 556478234 4.920000e-101 379.0
35 TraesCS4D01G098100 chr5D 86.923 130 10 6 1748 1877 360129099 360129221 9.090000e-29 139.0
36 TraesCS4D01G098100 chr1B 93.137 102 7 0 6398 6499 555629388 555629489 4.200000e-32 150.0
37 TraesCS4D01G098100 chr1A 93.137 102 7 0 6400 6501 239893814 239893915 4.200000e-32 150.0
38 TraesCS4D01G098100 chr1A 97.872 47 1 0 951 997 520174415 520174369 1.550000e-11 82.4
39 TraesCS4D01G098100 chr1A 97.872 47 1 0 951 997 532667419 532667373 1.550000e-11 82.4
40 TraesCS4D01G098100 chr3B 92.308 104 8 0 6402 6505 40942762 40942865 1.510000e-31 148.0
41 TraesCS4D01G098100 chr3A 93.069 101 7 0 6402 6502 269394411 269394311 1.510000e-31 148.0
42 TraesCS4D01G098100 chr7B 89.167 120 7 4 6402 6517 589348415 589348298 1.950000e-30 145.0
43 TraesCS4D01G098100 chr7B 92.157 102 7 1 6401 6502 562993065 562993165 7.020000e-30 143.0
44 TraesCS4D01G098100 chr2B 91.509 106 7 2 6402 6507 601206943 601206840 1.950000e-30 145.0
45 TraesCS4D01G098100 chr2B 83.784 148 14 6 1748 1892 670848045 670848185 1.520000e-26 132.0
46 TraesCS4D01G098100 chr5A 90.291 103 6 2 1793 1892 683119788 683119687 1.520000e-26 132.0
47 TraesCS4D01G098100 chr1D 85.577 104 8 5 1748 1851 104862182 104862278 1.190000e-17 102.0
48 TraesCS4D01G098100 chr1D 97.872 47 1 0 951 997 104862029 104862075 1.550000e-11 82.4
49 TraesCS4D01G098100 chr1D 97.872 47 1 0 951 997 414306124 414306170 1.550000e-11 82.4
50 TraesCS4D01G098100 chr1D 97.872 47 1 0 951 997 483536174 483536220 1.550000e-11 82.4
51 TraesCS4D01G098100 chr2D 83.117 77 13 0 5597 5673 533084068 533084144 3.360000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G098100 chr4D 74607381 74614100 6719 True 4569.333333 12410 95.996667 1 6720 3 chr4D.!!$R3 6719
1 TraesCS4D01G098100 chr4A 513080747 513088398 7651 False 1605.333333 4656 92.493667 1 6720 6 chr4A.!!$F1 6719
2 TraesCS4D01G098100 chr4A 676926342 676927259 917 False 218.500000 311 85.488000 950 1892 2 chr4A.!!$F2 942
3 TraesCS4D01G098100 chr4B 106971528 106985724 14196 True 1122.416667 4093 90.466500 1 6224 12 chr4B.!!$R1 6223

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
290 4037 0.539438 GGGCTGGACAACCATCACAA 60.539 55.000 0.00 0.00 45.87 3.33 F
825 9671 0.688087 GACCACTCGGGGGATCTCTT 60.688 60.000 0.00 0.00 42.91 2.85 F
1321 10280 0.527600 TCGATCGACCCAAATCGCTG 60.528 55.000 15.15 0.00 43.36 5.18 F
2417 11540 0.038251 TGTCGTCAGGTGCATGAGAC 60.038 55.000 0.00 1.67 32.57 3.36 F
3010 12134 0.381089 GCAGCTGATCCATCACAAGC 59.619 55.000 20.43 0.00 32.50 4.01 F
3440 12564 0.036010 CATTGCAGTCCTCGAGGGTT 60.036 55.000 30.80 16.55 36.25 4.11 F
3443 12567 0.039180 TGCAGTCCTCGAGGGTTAGA 59.961 55.000 30.80 8.82 36.25 2.10 F
3444 12568 0.741915 GCAGTCCTCGAGGGTTAGAG 59.258 60.000 30.80 15.52 36.25 2.43 F
3445 12569 1.682394 GCAGTCCTCGAGGGTTAGAGA 60.682 57.143 30.80 7.18 36.65 3.10 F
3446 12570 2.724454 CAGTCCTCGAGGGTTAGAGAA 58.276 52.381 30.80 6.36 36.65 2.87 F
5329 14647 1.507140 AACCTGAGTGGACTGGTTCA 58.493 50.000 0.00 0.00 44.60 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1303 10262 0.806102 ACAGCGATTTGGGTCGATCG 60.806 55.000 9.36 9.36 45.81 3.69 R
2154 11277 1.271926 ACCATTTCACCACTACCTGGC 60.272 52.381 0.00 0.00 45.32 4.85 R
3279 12403 1.140312 ACCCTCAAGGACTTCTGCAA 58.860 50.000 0.00 0.00 39.89 4.08 R
3424 12548 0.039180 TCTAACCCTCGAGGACTGCA 59.961 55.000 33.39 10.58 39.89 4.41 R
4768 14083 1.317613 CACAGCTAGCCAACCAAACA 58.682 50.000 12.13 0.00 0.00 2.83 R
5250 14568 3.012274 TGGATTTATTTCAGGCCTTCCCA 59.988 43.478 0.00 0.00 35.39 4.37 R
5251 14569 3.638627 CTGGATTTATTTCAGGCCTTCCC 59.361 47.826 0.00 0.00 0.00 3.97 R
5252 14570 3.638627 CCTGGATTTATTTCAGGCCTTCC 59.361 47.826 0.00 5.56 41.12 3.46 R
5275 14593 3.924238 CACGGGTGCTTGCATATTC 57.076 52.632 0.00 0.00 0.00 1.75 R
5367 14685 5.064707 AGGCAATGATCAAATACACACGTAC 59.935 40.000 0.00 0.00 0.00 3.67 R
6525 15873 0.250338 AACCGGGTGAGTGAAAGCTC 60.250 55.000 6.32 0.00 36.12 4.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 4.018779 CCAACCCTTACAAGACCATCCTTA 60.019 45.833 0.00 0.00 0.00 2.69
72 75 0.704076 AACAAGCTCCTGGGGCATAA 59.296 50.000 22.77 0.00 0.00 1.90
103 106 1.982395 CCTCCTACACTCGGTGGCA 60.982 63.158 8.57 0.00 37.94 4.92
194 3941 0.798776 GACACAATGGCCGAGAAGTG 59.201 55.000 0.00 5.15 0.00 3.16
196 3943 1.003580 ACACAATGGCCGAGAAGTGAT 59.996 47.619 16.99 3.10 0.00 3.06
198 3945 1.278985 ACAATGGCCGAGAAGTGATCA 59.721 47.619 0.00 0.00 0.00 2.92
231 3978 0.651031 GAAGCCGTCAATAGCGAACC 59.349 55.000 0.00 0.00 0.00 3.62
290 4037 0.539438 GGGCTGGACAACCATCACAA 60.539 55.000 0.00 0.00 45.87 3.33
297 4044 3.016736 GGACAACCATCACAAATCCGAT 58.983 45.455 0.00 0.00 35.97 4.18
298 4045 3.181497 GGACAACCATCACAAATCCGATG 60.181 47.826 0.00 0.00 39.00 3.84
307 4054 6.238211 CCATCACAAATCCGATGAGACTAAAC 60.238 42.308 0.00 0.00 41.28 2.01
339 4086 2.125912 CTCAGTGGCTTCCCGACG 60.126 66.667 0.00 0.00 0.00 5.12
384 4131 4.116238 GCCAGACGGAGAAGAATCTAAAG 58.884 47.826 0.00 0.00 35.54 1.85
386 4133 4.402793 CCAGACGGAGAAGAATCTAAAGGA 59.597 45.833 0.00 0.00 35.54 3.36
388 4135 4.403113 AGACGGAGAAGAATCTAAAGGACC 59.597 45.833 0.00 0.00 35.54 4.46
480 4500 4.753107 TGAGAATGTAACCGAAGTTCCAAC 59.247 41.667 0.00 0.00 37.42 3.77
504 4528 8.001881 ACTTCATTACAACAAATAACACACCA 57.998 30.769 0.00 0.00 0.00 4.17
528 4552 6.899393 TTCTATTTTTGTCAGCCAGATTGT 57.101 33.333 0.00 0.00 0.00 2.71
629 9460 5.920903 AGCATAAATAAGTAAGGCACGGTA 58.079 37.500 0.00 0.00 0.00 4.02
632 9463 7.012044 AGCATAAATAAGTAAGGCACGGTAAAG 59.988 37.037 0.00 0.00 0.00 1.85
740 9581 3.930504 CCAAAGAGGGCCATCAGC 58.069 61.111 21.34 0.00 42.60 4.26
825 9671 0.688087 GACCACTCGGGGGATCTCTT 60.688 60.000 0.00 0.00 42.91 2.85
993 9842 4.932799 GGTGAGAGAAGTAGAGGCTTTTTC 59.067 45.833 0.00 0.00 0.00 2.29
1163 10012 1.082954 CCAGGGAGAAGGGGAAGGA 59.917 63.158 0.00 0.00 0.00 3.36
1176 10031 2.200955 GGGAAGGAGAAGGAGAATGGT 58.799 52.381 0.00 0.00 0.00 3.55
1194 10049 2.034221 GGAGAGGGCGGCAAGTTT 59.966 61.111 12.47 0.00 0.00 2.66
1221 10076 0.988832 AATTCGCCAGGGTGTTCCTA 59.011 50.000 0.00 0.00 46.12 2.94
1273 10128 4.097589 GCTCCTCTTGAAATCCTTGATTGG 59.902 45.833 0.00 0.00 32.14 3.16
1287 10146 3.423539 TGATTGGTTTAGTGCTCAGCT 57.576 42.857 0.00 0.00 0.00 4.24
1321 10280 0.527600 TCGATCGACCCAAATCGCTG 60.528 55.000 15.15 0.00 43.36 5.18
1480 10441 4.021102 AGGTGGACTGGATGTTTACTTG 57.979 45.455 0.00 0.00 0.00 3.16
1483 10444 4.215613 GGTGGACTGGATGTTTACTTGTTC 59.784 45.833 0.00 0.00 0.00 3.18
1500 10464 9.677567 TTACTTGTTCTATTTTGTGAATCTTGC 57.322 29.630 0.00 0.00 0.00 4.01
1543 10507 0.677842 AAGCTGCTTCTGCTTTTGGG 59.322 50.000 9.53 0.00 44.04 4.12
1653 10626 5.106038 TGGATGACATTCTGCTTTCAACATC 60.106 40.000 0.00 0.00 0.00 3.06
1657 10633 5.300034 TGACATTCTGCTTTCAACATCAGTT 59.700 36.000 0.00 0.00 38.88 3.16
1696 10672 4.957296 TCCTTAGTTCAGTTGTCCTTGAC 58.043 43.478 0.00 0.00 0.00 3.18
1821 10797 0.601558 CTCTGCTTTGCCATGCTTGT 59.398 50.000 0.00 0.00 0.00 3.16
1925 10964 5.466393 CAGCATCAACGTATATGTGATTCCA 59.534 40.000 10.66 0.00 0.00 3.53
1940 10979 3.130516 TGATTCCACGCACTAGTAAGAGG 59.869 47.826 0.00 0.88 0.00 3.69
1988 11110 8.723777 GGCAACTAGTTGTTAAATTAACTCAC 57.276 34.615 30.90 12.84 42.31 3.51
2010 11132 2.029110 ACTTCATTTCAACAATGCCCGG 60.029 45.455 0.00 0.00 0.00 5.73
2019 11141 2.038387 ACAATGCCCGGAGTCATAAC 57.962 50.000 0.73 0.00 0.00 1.89
2088 11211 6.216569 GTTTCTTCTTTCTTGTGAAATCCCC 58.783 40.000 0.00 0.00 40.85 4.81
2135 11258 6.989169 CCTTCCAATTGTCTATTCACTAGGAG 59.011 42.308 4.43 0.00 0.00 3.69
2162 11285 1.588674 TTTGTGTTGACGCCAGGTAG 58.411 50.000 0.00 0.00 0.00 3.18
2197 11320 5.080642 GATGTTTTCATCGCATCTCTCTG 57.919 43.478 0.00 0.00 45.56 3.35
2202 11325 2.314246 TCATCGCATCTCTCTGTGGAT 58.686 47.619 0.00 0.00 0.00 3.41
2205 11328 4.342092 TCATCGCATCTCTCTGTGGATAAA 59.658 41.667 0.00 0.00 0.00 1.40
2253 11376 1.555075 AGCATTAAAGCTCAGGACCGA 59.445 47.619 0.00 0.00 42.18 4.69
2333 11456 9.462174 CTGTTTCTGTTTGAGTAAATTATTGCA 57.538 29.630 0.00 0.00 0.00 4.08
2414 11537 2.183478 ATTTGTCGTCAGGTGCATGA 57.817 45.000 0.00 0.00 0.00 3.07
2417 11540 0.038251 TGTCGTCAGGTGCATGAGAC 60.038 55.000 0.00 1.67 32.57 3.36
2462 11585 4.552355 CAATGTGTGTTGTGAATGCTCAT 58.448 39.130 0.00 0.00 33.05 2.90
2502 11625 8.865590 GACTGTTATTTCAGGCTTGTTTTAAA 57.134 30.769 0.00 0.00 40.07 1.52
2505 11628 7.787028 TGTTATTTCAGGCTTGTTTTAAAGGT 58.213 30.769 0.00 0.00 0.00 3.50
2556 11679 7.339466 TCTGTCACATGATACGGCATATAGTAT 59.661 37.037 0.00 0.00 36.38 2.12
2557 11680 7.836842 TGTCACATGATACGGCATATAGTATT 58.163 34.615 0.00 0.00 34.09 1.89
2593 11717 4.033990 TGTCTTCGAGCTGTGATCATAC 57.966 45.455 0.00 0.00 0.00 2.39
2600 11724 2.932614 GAGCTGTGATCATACCACACAC 59.067 50.000 0.00 0.00 39.36 3.82
2616 11740 5.353123 ACCACACACTGTTAACAAGTACTTG 59.647 40.000 29.76 29.76 45.58 3.16
2723 11847 1.625818 CAGCCTACTGGAGTGGTTTCT 59.374 52.381 0.00 0.00 40.48 2.52
2825 11949 5.246981 AGGAATTTGTCAGAGACCATTCA 57.753 39.130 15.38 0.00 35.09 2.57
2849 11973 4.553330 TGAGATGGGTCACTTCTTAACC 57.447 45.455 0.00 0.00 34.07 2.85
2871 11995 1.478916 TCCGTTATGATGGACGCTCAA 59.521 47.619 0.00 0.00 36.01 3.02
3010 12134 0.381089 GCAGCTGATCCATCACAAGC 59.619 55.000 20.43 0.00 32.50 4.01
3250 12374 3.532102 ACCAAACCACTAGGAAGAGGAT 58.468 45.455 0.00 0.00 36.97 3.24
3251 12375 3.916989 ACCAAACCACTAGGAAGAGGATT 59.083 43.478 0.00 0.00 36.97 3.01
3252 12376 5.098663 ACCAAACCACTAGGAAGAGGATTA 58.901 41.667 0.00 0.00 36.97 1.75
3253 12377 5.189934 ACCAAACCACTAGGAAGAGGATTAG 59.810 44.000 0.00 0.00 36.97 1.73
3254 12378 5.425539 CCAAACCACTAGGAAGAGGATTAGA 59.574 44.000 0.00 0.00 36.97 2.10
3255 12379 6.407525 CCAAACCACTAGGAAGAGGATTAGAG 60.408 46.154 0.00 0.00 36.97 2.43
3256 12380 5.735733 ACCACTAGGAAGAGGATTAGAGA 57.264 43.478 0.00 0.00 36.97 3.10
3257 12381 6.093617 ACCACTAGGAAGAGGATTAGAGAA 57.906 41.667 0.00 0.00 36.97 2.87
3258 12382 6.503944 ACCACTAGGAAGAGGATTAGAGAAA 58.496 40.000 0.00 0.00 36.97 2.52
3259 12383 7.136203 ACCACTAGGAAGAGGATTAGAGAAAT 58.864 38.462 0.00 0.00 36.97 2.17
3260 12384 7.289084 ACCACTAGGAAGAGGATTAGAGAAATC 59.711 40.741 0.00 0.00 39.91 2.17
3261 12385 7.367285 CACTAGGAAGAGGATTAGAGAAATCG 58.633 42.308 0.00 0.00 44.32 3.34
3262 12386 7.229707 CACTAGGAAGAGGATTAGAGAAATCGA 59.770 40.741 0.00 0.00 44.32 3.59
3263 12387 7.947890 ACTAGGAAGAGGATTAGAGAAATCGAT 59.052 37.037 0.00 0.00 44.32 3.59
3264 12388 6.991938 AGGAAGAGGATTAGAGAAATCGATG 58.008 40.000 0.00 0.00 44.32 3.84
3265 12389 5.637387 GGAAGAGGATTAGAGAAATCGATGC 59.363 44.000 0.00 0.00 44.32 3.91
3266 12390 5.798125 AGAGGATTAGAGAAATCGATGCA 57.202 39.130 0.00 0.00 44.32 3.96
3267 12391 6.166984 AGAGGATTAGAGAAATCGATGCAA 57.833 37.500 0.00 0.00 44.32 4.08
3268 12392 6.586344 AGAGGATTAGAGAAATCGATGCAAA 58.414 36.000 0.00 0.00 44.32 3.68
3269 12393 7.222872 AGAGGATTAGAGAAATCGATGCAAAT 58.777 34.615 0.00 0.00 44.32 2.32
3270 12394 7.172875 AGAGGATTAGAGAAATCGATGCAAATG 59.827 37.037 0.00 0.00 44.32 2.32
3271 12395 6.994496 AGGATTAGAGAAATCGATGCAAATGA 59.006 34.615 0.00 0.00 44.32 2.57
3272 12396 7.041508 AGGATTAGAGAAATCGATGCAAATGAC 60.042 37.037 0.00 0.00 44.32 3.06
3273 12397 7.041508 GGATTAGAGAAATCGATGCAAATGACT 60.042 37.037 0.00 0.00 44.32 3.41
3274 12398 5.731599 AGAGAAATCGATGCAAATGACTC 57.268 39.130 0.00 0.19 0.00 3.36
3275 12399 5.426504 AGAGAAATCGATGCAAATGACTCT 58.573 37.500 0.00 2.43 0.00 3.24
3276 12400 5.293814 AGAGAAATCGATGCAAATGACTCTG 59.706 40.000 0.00 0.00 31.31 3.35
3277 12401 3.687572 AATCGATGCAAATGACTCTGC 57.312 42.857 0.00 0.00 39.09 4.26
3282 12406 2.357327 TGCAAATGACTCTGCATTGC 57.643 45.000 11.12 11.12 43.44 3.56
3283 12407 1.614413 TGCAAATGACTCTGCATTGCA 59.386 42.857 15.60 15.60 43.44 4.08
3294 12418 2.275134 TGCATTGCAGAAGTCCTTGA 57.725 45.000 7.38 0.00 33.32 3.02
3295 12419 2.156917 TGCATTGCAGAAGTCCTTGAG 58.843 47.619 7.38 0.00 33.32 3.02
3380 12504 2.036089 TGCAAATGACTCTGCATTGCAA 59.964 40.909 16.86 0.00 43.44 4.08
3426 12550 2.357327 TGCAAATGACTCTGCATTGC 57.643 45.000 11.12 11.12 43.44 3.56
3427 12551 1.614413 TGCAAATGACTCTGCATTGCA 59.386 42.857 15.60 15.60 43.44 4.08
3436 12560 4.604114 TGCATTGCAGTCCTCGAG 57.396 55.556 7.38 5.13 33.32 4.04
3437 12561 1.078918 TGCATTGCAGTCCTCGAGG 60.079 57.895 26.32 26.32 33.32 4.63
3438 12562 1.817099 GCATTGCAGTCCTCGAGGG 60.817 63.158 30.80 16.30 35.41 4.30
3439 12563 1.599047 CATTGCAGTCCTCGAGGGT 59.401 57.895 30.80 16.16 36.25 4.34
3440 12564 0.036010 CATTGCAGTCCTCGAGGGTT 60.036 55.000 30.80 16.55 36.25 4.11
3441 12565 1.207089 CATTGCAGTCCTCGAGGGTTA 59.793 52.381 30.80 9.66 36.25 2.85
3442 12566 0.895530 TTGCAGTCCTCGAGGGTTAG 59.104 55.000 30.80 18.52 36.25 2.34
3443 12567 0.039180 TGCAGTCCTCGAGGGTTAGA 59.961 55.000 30.80 8.82 36.25 2.10
3444 12568 0.741915 GCAGTCCTCGAGGGTTAGAG 59.258 60.000 30.80 15.52 36.25 2.43
3445 12569 1.682394 GCAGTCCTCGAGGGTTAGAGA 60.682 57.143 30.80 7.18 36.65 3.10
3446 12570 2.724454 CAGTCCTCGAGGGTTAGAGAA 58.276 52.381 30.80 6.36 36.65 2.87
3447 12571 3.090037 CAGTCCTCGAGGGTTAGAGAAA 58.910 50.000 30.80 5.56 36.65 2.52
3448 12572 3.702045 CAGTCCTCGAGGGTTAGAGAAAT 59.298 47.826 30.80 5.60 36.65 2.17
3449 12573 3.955551 AGTCCTCGAGGGTTAGAGAAATC 59.044 47.826 30.80 7.38 36.65 2.17
3450 12574 2.950309 TCCTCGAGGGTTAGAGAAATCG 59.050 50.000 30.80 0.20 36.65 3.34
3451 12575 2.950309 CCTCGAGGGTTAGAGAAATCGA 59.050 50.000 24.62 0.00 36.65 3.59
3452 12576 3.570550 CCTCGAGGGTTAGAGAAATCGAT 59.429 47.826 24.62 0.00 38.37 3.59
3453 12577 4.541779 CTCGAGGGTTAGAGAAATCGATG 58.458 47.826 3.91 0.00 38.37 3.84
3454 12578 3.053455 CGAGGGTTAGAGAAATCGATGC 58.947 50.000 0.00 0.00 32.13 3.91
3455 12579 3.490933 CGAGGGTTAGAGAAATCGATGCA 60.491 47.826 0.00 0.00 32.13 3.96
3456 12580 4.442706 GAGGGTTAGAGAAATCGATGCAA 58.557 43.478 0.00 0.00 0.00 4.08
3457 12581 4.843728 AGGGTTAGAGAAATCGATGCAAA 58.156 39.130 0.00 0.00 0.00 3.68
3458 12582 5.440610 AGGGTTAGAGAAATCGATGCAAAT 58.559 37.500 0.00 0.00 0.00 2.32
3459 12583 5.297776 AGGGTTAGAGAAATCGATGCAAATG 59.702 40.000 0.00 0.00 0.00 2.32
3460 12584 5.296780 GGGTTAGAGAAATCGATGCAAATGA 59.703 40.000 0.00 0.00 0.00 2.57
3461 12585 6.425504 GGTTAGAGAAATCGATGCAAATGAG 58.574 40.000 0.00 0.00 0.00 2.90
3462 12586 6.258727 GGTTAGAGAAATCGATGCAAATGAGA 59.741 38.462 0.00 0.00 0.00 3.27
3463 12587 5.731599 AGAGAAATCGATGCAAATGAGAC 57.268 39.130 0.00 0.00 0.00 3.36
3464 12588 5.426504 AGAGAAATCGATGCAAATGAGACT 58.573 37.500 0.00 0.00 0.00 3.24
3465 12589 5.293814 AGAGAAATCGATGCAAATGAGACTG 59.706 40.000 0.00 0.00 0.00 3.51
3497 12621 4.354662 AGTCCTCGAGGGTTAGAGAAATT 58.645 43.478 30.80 2.31 36.65 1.82
3608 12780 4.269603 AGAGAAATCGATGCAAATGACTCG 59.730 41.667 0.00 0.00 0.00 4.18
3970 13238 9.023962 AGTCTAATTATTTGAATTGTTGGAGCA 57.976 29.630 0.00 0.00 0.00 4.26
4089 13357 5.105392 ACATTATTGGTTGCCATTCATCGTT 60.105 36.000 0.00 0.00 31.53 3.85
4640 13929 4.072131 CCAAGAATCCTTTCGGTCTTCAA 58.928 43.478 0.00 0.00 36.93 2.69
4758 14050 9.392021 CTCTTCTTTGTTAGATTTCAAAAGAGC 57.608 33.333 0.00 0.00 34.64 4.09
4759 14051 8.902806 TCTTCTTTGTTAGATTTCAAAAGAGCA 58.097 29.630 0.00 0.00 33.99 4.26
4760 14052 8.856490 TTCTTTGTTAGATTTCAAAAGAGCAC 57.144 30.769 0.00 0.00 33.99 4.40
4762 14054 8.131100 TCTTTGTTAGATTTCAAAAGAGCACTG 58.869 33.333 0.00 0.00 33.99 3.66
4763 14055 7.566760 TTGTTAGATTTCAAAAGAGCACTGA 57.433 32.000 0.00 0.00 0.00 3.41
4768 14083 5.591877 AGATTTCAAAAGAGCACTGAGTGTT 59.408 36.000 14.82 8.27 35.75 3.32
5037 14352 5.833406 ATTGTCAAGTTGTGTGAATGACA 57.167 34.783 2.11 3.01 46.12 3.58
5061 14376 6.319141 TGATAACTCGAGTGATGGAGTATG 57.681 41.667 20.58 0.00 42.42 2.39
5130 14445 5.604010 TTGTTGCAAAACTTTGACAAAGG 57.396 34.783 27.26 13.45 42.82 3.11
5170 14485 4.601406 ATCCTGCCAAATTAGTAACCCA 57.399 40.909 0.00 0.00 0.00 4.51
5224 14539 7.499232 CAGTAGGGAAACAGTTATATTTCAGGG 59.501 40.741 0.00 0.00 36.69 4.45
5229 14546 8.033038 GGGAAACAGTTATATTTCAGGGTTTTC 58.967 37.037 0.00 0.00 36.69 2.29
5249 14567 7.094377 GGTTTTCTTACCACTGAATGAATAGCA 60.094 37.037 0.00 0.00 38.12 3.49
5250 14568 8.462016 GTTTTCTTACCACTGAATGAATAGCAT 58.538 33.333 0.00 0.00 39.43 3.79
5251 14569 7.558161 TTCTTACCACTGAATGAATAGCATG 57.442 36.000 0.00 0.00 37.28 4.06
5252 14570 6.057533 TCTTACCACTGAATGAATAGCATGG 58.942 40.000 0.00 0.00 37.28 3.66
5253 14571 3.559069 ACCACTGAATGAATAGCATGGG 58.441 45.455 0.00 0.00 37.28 4.00
5275 14593 3.319031 AGGCCTGAAATAAATCCAGGG 57.681 47.619 3.11 0.00 45.67 4.45
5283 14601 6.494491 CCTGAAATAAATCCAGGGAATATGCA 59.506 38.462 0.00 0.00 42.75 3.96
5329 14647 1.507140 AACCTGAGTGGACTGGTTCA 58.493 50.000 0.00 0.00 44.60 3.18
5371 14689 1.193203 ACAGTAGTCGTGTCGTGTACG 59.807 52.381 0.00 0.00 42.56 3.67
5744 15062 3.629438 CATGTGCACATGTTGAGACAA 57.371 42.857 39.68 9.45 46.40 3.18
5763 15081 7.767659 TGAGACAATGTTCTCTTCCATTATCTG 59.232 37.037 11.86 0.00 42.36 2.90
5786 15104 3.884037 AAAATTGTCAGGGGTCTGTCT 57.116 42.857 0.00 0.00 41.59 3.41
5787 15105 2.867109 AATTGTCAGGGGTCTGTCTG 57.133 50.000 0.00 0.00 41.59 3.51
5788 15106 0.326264 ATTGTCAGGGGTCTGTCTGC 59.674 55.000 0.00 0.00 41.59 4.26
5789 15107 1.053835 TTGTCAGGGGTCTGTCTGCA 61.054 55.000 0.00 0.00 41.59 4.41
5790 15108 1.053835 TGTCAGGGGTCTGTCTGCAA 61.054 55.000 0.00 0.00 41.59 4.08
5792 15110 1.067295 TCAGGGGTCTGTCTGCAATT 58.933 50.000 0.00 0.00 41.59 2.32
5794 15112 0.329596 AGGGGTCTGTCTGCAATTCC 59.670 55.000 0.00 0.00 0.00 3.01
5795 15113 0.038166 GGGGTCTGTCTGCAATTCCA 59.962 55.000 0.00 0.00 0.00 3.53
5796 15114 1.168714 GGGTCTGTCTGCAATTCCAC 58.831 55.000 0.00 0.00 0.00 4.02
5797 15115 1.168714 GGTCTGTCTGCAATTCCACC 58.831 55.000 0.00 0.00 0.00 4.61
5799 15117 0.684535 TCTGTCTGCAATTCCACCGA 59.315 50.000 0.00 0.00 0.00 4.69
5800 15118 1.278985 TCTGTCTGCAATTCCACCGAT 59.721 47.619 0.00 0.00 0.00 4.18
5801 15119 1.667724 CTGTCTGCAATTCCACCGATC 59.332 52.381 0.00 0.00 0.00 3.69
5802 15120 1.017387 GTCTGCAATTCCACCGATCC 58.983 55.000 0.00 0.00 0.00 3.36
5803 15121 0.617935 TCTGCAATTCCACCGATCCA 59.382 50.000 0.00 0.00 0.00 3.41
5804 15122 1.212688 TCTGCAATTCCACCGATCCAT 59.787 47.619 0.00 0.00 0.00 3.41
5807 15125 0.670162 CAATTCCACCGATCCATGGC 59.330 55.000 6.96 0.00 35.81 4.40
5808 15126 0.468029 AATTCCACCGATCCATGGCC 60.468 55.000 6.96 0.00 35.81 5.36
5920 15265 2.835764 TGTGGAGTAAATCGGTTAGCCT 59.164 45.455 0.00 0.00 0.00 4.58
5922 15267 3.132467 GTGGAGTAAATCGGTTAGCCTCT 59.868 47.826 0.00 0.00 0.00 3.69
5944 15289 7.260558 TCTGTCGTATCTGTTCGAGAATAAT 57.739 36.000 0.00 0.00 36.76 1.28
5969 15314 3.488048 GCATTGCTGCCGTTTGTAA 57.512 47.368 0.16 0.00 42.88 2.41
5981 15326 6.685527 TGCCGTTTGTAATTCTGCATTATA 57.314 33.333 0.00 0.00 29.70 0.98
5984 15329 6.582295 GCCGTTTGTAATTCTGCATTATATGG 59.418 38.462 0.00 0.00 29.70 2.74
5985 15330 6.582295 CCGTTTGTAATTCTGCATTATATGGC 59.418 38.462 0.00 0.00 29.70 4.40
5991 15336 3.063510 TCTGCATTATATGGCCAGAGC 57.936 47.619 13.05 7.02 38.76 4.09
5992 15337 2.372837 TCTGCATTATATGGCCAGAGCA 59.627 45.455 13.05 11.86 42.56 4.26
5995 15340 2.159282 GCATTATATGGCCAGAGCATGC 60.159 50.000 23.54 23.54 42.56 4.06
6025 15370 7.639378 TCTACTAGGTTTTATTGATGCCCTTT 58.361 34.615 0.00 0.00 0.00 3.11
6041 15386 7.341769 TGATGCCCTTTAGTTTGCAGTTATAAT 59.658 33.333 0.00 0.00 37.12 1.28
6045 15390 9.863845 GCCCTTTAGTTTGCAGTTATAATTTTA 57.136 29.630 0.00 0.00 0.00 1.52
6049 15394 9.562583 TTTAGTTTGCAGTTATAATTTTAGGCG 57.437 29.630 0.00 0.00 0.00 5.52
6062 15407 6.822073 AATTTTAGGCGAAAACTTGTTGAC 57.178 33.333 7.68 0.00 39.83 3.18
6063 15408 4.966965 TTTAGGCGAAAACTTGTTGACA 57.033 36.364 0.00 0.00 0.00 3.58
6069 15414 5.009610 AGGCGAAAACTTGTTGACATATGTT 59.990 36.000 10.30 0.00 0.00 2.71
6085 15430 3.589061 ATGTTGTTGCATTTTTGCGTG 57.411 38.095 0.00 0.00 37.69 5.34
6086 15431 2.610433 TGTTGTTGCATTTTTGCGTGA 58.390 38.095 0.00 0.00 37.69 4.35
6103 15448 5.900413 TGCGTGAATTATCGTCGAATAATG 58.100 37.500 0.00 0.00 33.23 1.90
6150 15496 4.763279 TGGGCTGATAATGATATGTGCTTG 59.237 41.667 0.00 0.00 0.00 4.01
6158 15504 5.496133 AATGATATGTGCTTGACTGCTTC 57.504 39.130 0.00 0.00 0.00 3.86
6197 15544 0.385390 CCTTGTCTGGTGGTTGCAAC 59.615 55.000 21.59 21.59 0.00 4.17
6217 15564 0.599991 CACGTGGCTCTAGTGTGCAA 60.600 55.000 7.95 0.00 34.68 4.08
6225 15572 2.693069 CTCTAGTGTGCAACTGAAGGG 58.307 52.381 10.59 0.04 40.26 3.95
6229 15576 1.064758 AGTGTGCAACTGAAGGGTTGA 60.065 47.619 10.90 0.00 46.55 3.18
6244 15591 3.652869 AGGGTTGAGTGATGAAAGGAGAA 59.347 43.478 0.00 0.00 0.00 2.87
6245 15592 4.104738 AGGGTTGAGTGATGAAAGGAGAAA 59.895 41.667 0.00 0.00 0.00 2.52
6248 15595 6.015095 GGGTTGAGTGATGAAAGGAGAAAATT 60.015 38.462 0.00 0.00 0.00 1.82
6261 15608 5.140454 AGGAGAAAATTGGTTGCTAACTGT 58.860 37.500 0.00 0.00 0.00 3.55
6264 15611 6.460953 GGAGAAAATTGGTTGCTAACTGTGAA 60.461 38.462 0.00 0.00 0.00 3.18
6267 15614 8.637986 AGAAAATTGGTTGCTAACTGTGAAATA 58.362 29.630 0.00 0.00 0.00 1.40
6274 15621 7.613801 TGGTTGCTAACTGTGAAATATTATGGT 59.386 33.333 0.00 0.00 0.00 3.55
6292 15639 7.784470 TTATGGTTATTAACTTGGCCTGTTT 57.216 32.000 17.27 4.58 0.00 2.83
6315 15662 3.420893 TGGGAAAACTGTTGCCAGATAG 58.579 45.455 12.83 0.00 41.50 2.08
6316 15663 3.073798 TGGGAAAACTGTTGCCAGATAGA 59.926 43.478 12.83 0.00 41.50 1.98
6340 15687 2.696506 TCTTGTGATCTGCTTGCTCAG 58.303 47.619 0.00 0.00 35.46 3.35
6349 15696 2.912624 GCTTGCTCAGCCGCTGTTT 61.913 57.895 19.77 0.00 43.65 2.83
6351 15698 2.192608 CTTGCTCAGCCGCTGTTTCC 62.193 60.000 19.77 7.62 32.61 3.13
6372 15720 3.055530 CCTTTCTAGCTGTGACCTGTGAT 60.056 47.826 0.00 0.00 0.00 3.06
6373 15721 4.160439 CCTTTCTAGCTGTGACCTGTGATA 59.840 45.833 0.00 0.00 0.00 2.15
6379 15727 3.131933 AGCTGTGACCTGTGATACTGATC 59.868 47.826 0.00 0.00 0.00 2.92
6381 15729 4.442612 GCTGTGACCTGTGATACTGATCAT 60.443 45.833 0.00 0.00 43.95 2.45
6385 15733 5.010516 GTGACCTGTGATACTGATCATAGCT 59.989 44.000 0.00 0.00 45.37 3.32
6394 15742 4.434545 ACTGATCATAGCTTGCCATTCT 57.565 40.909 0.00 0.00 0.00 2.40
6397 15745 4.903054 TGATCATAGCTTGCCATTCTAGG 58.097 43.478 0.00 0.00 0.00 3.02
6398 15746 4.594491 TGATCATAGCTTGCCATTCTAGGA 59.406 41.667 0.00 0.00 0.00 2.94
6399 15747 5.250082 TGATCATAGCTTGCCATTCTAGGAT 59.750 40.000 0.00 2.05 36.79 3.24
6400 15748 5.157940 TCATAGCTTGCCATTCTAGGATC 57.842 43.478 0.00 0.00 0.00 3.36
6401 15749 4.842948 TCATAGCTTGCCATTCTAGGATCT 59.157 41.667 0.00 0.00 0.00 2.75
6402 15750 6.019108 TCATAGCTTGCCATTCTAGGATCTA 58.981 40.000 0.00 0.00 0.00 1.98
6403 15751 4.615588 AGCTTGCCATTCTAGGATCTAC 57.384 45.455 0.00 0.00 0.00 2.59
6404 15752 4.230455 AGCTTGCCATTCTAGGATCTACT 58.770 43.478 0.00 0.00 0.00 2.57
6405 15753 4.283212 AGCTTGCCATTCTAGGATCTACTC 59.717 45.833 0.00 0.00 0.00 2.59
6406 15754 4.562552 GCTTGCCATTCTAGGATCTACTCC 60.563 50.000 0.00 0.00 45.33 3.85
6407 15755 3.511477 TGCCATTCTAGGATCTACTCCC 58.489 50.000 0.00 0.00 46.27 4.30
6408 15756 3.142977 TGCCATTCTAGGATCTACTCCCT 59.857 47.826 0.00 0.00 46.27 4.20
6409 15757 3.767131 GCCATTCTAGGATCTACTCCCTC 59.233 52.174 0.00 0.00 46.27 4.30
6410 15758 4.510205 GCCATTCTAGGATCTACTCCCTCT 60.510 50.000 0.00 0.00 46.27 3.69
6411 15759 5.016173 CCATTCTAGGATCTACTCCCTCTG 58.984 50.000 0.00 0.00 46.27 3.35
6412 15760 5.458948 CCATTCTAGGATCTACTCCCTCTGT 60.459 48.000 0.00 0.00 46.27 3.41
6413 15761 4.986054 TCTAGGATCTACTCCCTCTGTC 57.014 50.000 0.00 0.00 46.27 3.51
6415 15763 1.501604 AGGATCTACTCCCTCTGTCCC 59.498 57.143 0.00 0.00 46.27 4.46
6416 15764 1.218196 GGATCTACTCCCTCTGTCCCA 59.782 57.143 0.00 0.00 38.19 4.37
6417 15765 2.359355 GGATCTACTCCCTCTGTCCCAA 60.359 54.545 0.00 0.00 38.19 4.12
6418 15766 3.375699 GATCTACTCCCTCTGTCCCAAA 58.624 50.000 0.00 0.00 0.00 3.28
6419 15767 3.269592 TCTACTCCCTCTGTCCCAAAA 57.730 47.619 0.00 0.00 0.00 2.44
6421 15769 4.955335 TCTACTCCCTCTGTCCCAAAATA 58.045 43.478 0.00 0.00 0.00 1.40
6423 15771 4.576330 ACTCCCTCTGTCCCAAAATAAG 57.424 45.455 0.00 0.00 0.00 1.73
6424 15772 3.916989 ACTCCCTCTGTCCCAAAATAAGT 59.083 43.478 0.00 0.00 0.00 2.24
6425 15773 4.263506 ACTCCCTCTGTCCCAAAATAAGTG 60.264 45.833 0.00 0.00 0.00 3.16
6426 15774 3.655777 TCCCTCTGTCCCAAAATAAGTGT 59.344 43.478 0.00 0.00 0.00 3.55
6427 15775 4.010349 CCCTCTGTCCCAAAATAAGTGTC 58.990 47.826 0.00 0.00 0.00 3.67
6428 15776 4.263506 CCCTCTGTCCCAAAATAAGTGTCT 60.264 45.833 0.00 0.00 0.00 3.41
6429 15777 4.938226 CCTCTGTCCCAAAATAAGTGTCTC 59.062 45.833 0.00 0.00 0.00 3.36
6430 15778 5.513094 CCTCTGTCCCAAAATAAGTGTCTCA 60.513 44.000 0.00 0.00 0.00 3.27
6432 15780 5.997746 TCTGTCCCAAAATAAGTGTCTCAAG 59.002 40.000 0.00 0.00 0.00 3.02
6433 15781 4.518970 TGTCCCAAAATAAGTGTCTCAAGC 59.481 41.667 0.00 0.00 0.00 4.01
6434 15782 4.762251 GTCCCAAAATAAGTGTCTCAAGCT 59.238 41.667 0.00 0.00 0.00 3.74
6435 15783 5.241728 GTCCCAAAATAAGTGTCTCAAGCTT 59.758 40.000 0.00 0.00 0.00 3.74
6436 15784 6.430000 GTCCCAAAATAAGTGTCTCAAGCTTA 59.570 38.462 0.00 0.00 0.00 3.09
6437 15785 6.655003 TCCCAAAATAAGTGTCTCAAGCTTAG 59.345 38.462 0.00 0.00 0.00 2.18
6438 15786 6.431234 CCCAAAATAAGTGTCTCAAGCTTAGT 59.569 38.462 0.00 0.00 0.00 2.24
6439 15787 7.606456 CCCAAAATAAGTGTCTCAAGCTTAGTA 59.394 37.037 0.00 0.00 0.00 1.82
6440 15788 8.443937 CCAAAATAAGTGTCTCAAGCTTAGTAC 58.556 37.037 0.00 0.00 0.00 2.73
6441 15789 8.988934 CAAAATAAGTGTCTCAAGCTTAGTACA 58.011 33.333 0.00 0.36 0.00 2.90
6442 15790 9.555727 AAAATAAGTGTCTCAAGCTTAGTACAA 57.444 29.630 0.00 0.00 0.00 2.41
6443 15791 8.535690 AATAAGTGTCTCAAGCTTAGTACAAC 57.464 34.615 0.00 0.00 0.00 3.32
6444 15792 5.793030 AGTGTCTCAAGCTTAGTACAACT 57.207 39.130 0.00 0.00 0.00 3.16
6445 15793 6.163135 AGTGTCTCAAGCTTAGTACAACTT 57.837 37.500 0.00 0.00 0.00 2.66
6446 15794 6.583562 AGTGTCTCAAGCTTAGTACAACTTT 58.416 36.000 0.00 0.00 0.00 2.66
6447 15795 6.480320 AGTGTCTCAAGCTTAGTACAACTTTG 59.520 38.462 0.00 0.00 0.00 2.77
6448 15796 6.258068 GTGTCTCAAGCTTAGTACAACTTTGT 59.742 38.462 0.00 0.00 44.86 2.83
6449 15797 7.437267 GTGTCTCAAGCTTAGTACAACTTTGTA 59.563 37.037 0.00 0.00 42.35 2.41
6474 15822 6.862090 ACTAAAGCTAGTACAAAGTTGAGACG 59.138 38.462 0.00 0.00 36.56 4.18
6475 15823 3.576648 AGCTAGTACAAAGTTGAGACGC 58.423 45.455 0.00 0.00 0.00 5.19
6476 15824 3.256136 AGCTAGTACAAAGTTGAGACGCT 59.744 43.478 0.00 0.00 0.00 5.07
6477 15825 3.988517 GCTAGTACAAAGTTGAGACGCTT 59.011 43.478 0.00 0.00 0.00 4.68
6478 15826 5.048224 AGCTAGTACAAAGTTGAGACGCTTA 60.048 40.000 0.00 0.00 0.00 3.09
6479 15827 5.805994 GCTAGTACAAAGTTGAGACGCTTAT 59.194 40.000 0.00 0.00 0.00 1.73
6480 15828 6.310711 GCTAGTACAAAGTTGAGACGCTTATT 59.689 38.462 0.00 0.00 0.00 1.40
6481 15829 7.148623 GCTAGTACAAAGTTGAGACGCTTATTT 60.149 37.037 0.00 0.00 0.00 1.40
6482 15830 7.492352 AGTACAAAGTTGAGACGCTTATTTT 57.508 32.000 0.00 0.00 0.00 1.82
6483 15831 7.352739 AGTACAAAGTTGAGACGCTTATTTTG 58.647 34.615 0.00 0.00 0.00 2.44
6484 15832 5.519722 ACAAAGTTGAGACGCTTATTTTGG 58.480 37.500 0.00 0.00 0.00 3.28
6485 15833 5.298276 ACAAAGTTGAGACGCTTATTTTGGA 59.702 36.000 0.00 0.00 0.00 3.53
6486 15834 6.183360 ACAAAGTTGAGACGCTTATTTTGGAA 60.183 34.615 0.00 0.00 0.00 3.53
6487 15835 5.358298 AGTTGAGACGCTTATTTTGGAAC 57.642 39.130 0.00 0.00 0.00 3.62
6488 15836 4.084013 AGTTGAGACGCTTATTTTGGAACG 60.084 41.667 0.00 0.00 0.00 3.95
6489 15837 3.395639 TGAGACGCTTATTTTGGAACGT 58.604 40.909 0.00 0.00 36.30 3.99
6490 15838 4.558178 TGAGACGCTTATTTTGGAACGTA 58.442 39.130 0.00 0.00 33.31 3.57
6491 15839 4.989797 TGAGACGCTTATTTTGGAACGTAA 59.010 37.500 0.00 0.00 33.31 3.18
6493 15841 4.390909 AGACGCTTATTTTGGAACGTAAGG 59.609 41.667 0.00 0.00 46.39 2.69
6494 15842 4.317488 ACGCTTATTTTGGAACGTAAGGA 58.683 39.130 0.00 0.00 46.39 3.36
6495 15843 4.390909 ACGCTTATTTTGGAACGTAAGGAG 59.609 41.667 0.00 0.00 46.39 3.69
6496 15844 4.390909 CGCTTATTTTGGAACGTAAGGAGT 59.609 41.667 0.00 0.00 46.39 3.85
6497 15845 5.577945 CGCTTATTTTGGAACGTAAGGAGTA 59.422 40.000 0.00 0.00 46.39 2.59
6498 15846 6.454715 CGCTTATTTTGGAACGTAAGGAGTAC 60.455 42.308 0.00 0.00 46.39 2.73
6499 15847 6.592994 GCTTATTTTGGAACGTAAGGAGTACT 59.407 38.462 0.00 0.00 46.39 2.73
6500 15848 7.118825 GCTTATTTTGGAACGTAAGGAGTACTT 59.881 37.037 0.00 0.00 46.39 2.24
6501 15849 9.643693 CTTATTTTGGAACGTAAGGAGTACTTA 57.356 33.333 0.00 0.00 46.39 2.24
6502 15850 9.643693 TTATTTTGGAACGTAAGGAGTACTTAG 57.356 33.333 0.00 0.00 42.12 2.18
6503 15851 6.655078 TTTGGAACGTAAGGAGTACTTAGT 57.345 37.500 0.00 0.00 42.12 2.24
6504 15852 7.759489 TTTGGAACGTAAGGAGTACTTAGTA 57.241 36.000 0.00 0.00 42.12 1.82
6505 15853 6.743575 TGGAACGTAAGGAGTACTTAGTAC 57.256 41.667 14.13 14.13 42.12 2.73
6506 15854 6.237901 TGGAACGTAAGGAGTACTTAGTACA 58.762 40.000 22.48 0.68 42.12 2.90
6507 15855 6.149474 TGGAACGTAAGGAGTACTTAGTACAC 59.851 42.308 22.48 16.62 42.12 2.90
6508 15856 6.149474 GGAACGTAAGGAGTACTTAGTACACA 59.851 42.308 22.48 0.54 42.12 3.72
6509 15857 7.308589 GGAACGTAAGGAGTACTTAGTACACAA 60.309 40.741 22.48 5.34 42.12 3.33
6510 15858 7.693969 ACGTAAGGAGTACTTAGTACACAAT 57.306 36.000 22.48 11.98 42.12 2.71
6511 15859 7.533426 ACGTAAGGAGTACTTAGTACACAATG 58.467 38.462 22.48 13.30 42.12 2.82
6512 15860 7.175641 ACGTAAGGAGTACTTAGTACACAATGT 59.824 37.037 22.48 13.81 42.12 2.71
6513 15861 8.025445 CGTAAGGAGTACTTAGTACACAATGTT 58.975 37.037 22.48 11.40 42.12 2.71
6514 15862 9.136952 GTAAGGAGTACTTAGTACACAATGTTG 57.863 37.037 22.48 0.00 42.12 3.33
6515 15863 7.534723 AGGAGTACTTAGTACACAATGTTGA 57.465 36.000 22.48 0.00 41.03 3.18
6516 15864 7.603651 AGGAGTACTTAGTACACAATGTTGAG 58.396 38.462 22.48 0.00 41.03 3.02
6517 15865 6.310711 GGAGTACTTAGTACACAATGTTGAGC 59.689 42.308 22.48 0.00 41.03 4.26
6518 15866 6.755206 AGTACTTAGTACACAATGTTGAGCA 58.245 36.000 22.48 0.00 41.03 4.26
6519 15867 6.868864 AGTACTTAGTACACAATGTTGAGCAG 59.131 38.462 22.48 0.00 41.03 4.24
6520 15868 5.611374 ACTTAGTACACAATGTTGAGCAGT 58.389 37.500 0.00 0.00 0.00 4.40
6521 15869 6.055588 ACTTAGTACACAATGTTGAGCAGTT 58.944 36.000 0.00 0.00 0.00 3.16
6522 15870 6.542370 ACTTAGTACACAATGTTGAGCAGTTT 59.458 34.615 0.00 0.00 0.00 2.66
6523 15871 5.424121 AGTACACAATGTTGAGCAGTTTC 57.576 39.130 0.00 0.00 0.00 2.78
6524 15872 4.881273 AGTACACAATGTTGAGCAGTTTCA 59.119 37.500 0.00 0.00 0.00 2.69
6525 15873 4.297299 ACACAATGTTGAGCAGTTTCAG 57.703 40.909 0.00 0.00 0.00 3.02
6526 15874 3.947196 ACACAATGTTGAGCAGTTTCAGA 59.053 39.130 0.00 0.00 0.00 3.27
6527 15875 4.036027 ACACAATGTTGAGCAGTTTCAGAG 59.964 41.667 0.00 0.00 0.00 3.35
6528 15876 3.004106 ACAATGTTGAGCAGTTTCAGAGC 59.996 43.478 0.00 0.00 0.00 4.09
6529 15877 2.627515 TGTTGAGCAGTTTCAGAGCT 57.372 45.000 0.00 0.00 42.17 4.09
6530 15878 2.923121 TGTTGAGCAGTTTCAGAGCTT 58.077 42.857 0.00 0.00 39.02 3.74
6531 15879 3.282021 TGTTGAGCAGTTTCAGAGCTTT 58.718 40.909 0.00 0.00 39.02 3.51
6532 15880 3.313526 TGTTGAGCAGTTTCAGAGCTTTC 59.686 43.478 0.00 0.00 39.02 2.62
6533 15881 3.198409 TGAGCAGTTTCAGAGCTTTCA 57.802 42.857 0.00 0.00 39.02 2.69
6534 15882 2.874701 TGAGCAGTTTCAGAGCTTTCAC 59.125 45.455 0.00 0.00 39.02 3.18
6535 15883 3.137533 GAGCAGTTTCAGAGCTTTCACT 58.862 45.455 0.00 0.00 39.02 3.41
6536 15884 3.137533 AGCAGTTTCAGAGCTTTCACTC 58.862 45.455 0.00 0.00 34.37 3.51
6537 15885 2.874701 GCAGTTTCAGAGCTTTCACTCA 59.125 45.455 0.00 0.00 39.26 3.41
6538 15886 3.303659 GCAGTTTCAGAGCTTTCACTCAC 60.304 47.826 0.00 0.00 39.26 3.51
6539 15887 3.249559 CAGTTTCAGAGCTTTCACTCACC 59.750 47.826 0.00 0.00 39.26 4.02
6540 15888 2.550180 GTTTCAGAGCTTTCACTCACCC 59.450 50.000 0.00 0.00 39.26 4.61
6541 15889 0.318441 TCAGAGCTTTCACTCACCCG 59.682 55.000 0.00 0.00 39.26 5.28
6542 15890 0.671781 CAGAGCTTTCACTCACCCGG 60.672 60.000 0.00 0.00 39.26 5.73
6543 15891 1.122019 AGAGCTTTCACTCACCCGGT 61.122 55.000 0.00 0.00 39.26 5.28
6544 15892 0.250338 GAGCTTTCACTCACCCGGTT 60.250 55.000 0.00 0.00 36.65 4.44
6545 15893 0.250338 AGCTTTCACTCACCCGGTTC 60.250 55.000 0.00 0.00 0.00 3.62
6546 15894 0.250338 GCTTTCACTCACCCGGTTCT 60.250 55.000 0.00 0.00 0.00 3.01
6547 15895 1.814248 GCTTTCACTCACCCGGTTCTT 60.814 52.381 0.00 0.00 0.00 2.52
6548 15896 2.143925 CTTTCACTCACCCGGTTCTTC 58.856 52.381 0.00 0.00 0.00 2.87
6549 15897 1.420430 TTCACTCACCCGGTTCTTCT 58.580 50.000 0.00 0.00 0.00 2.85
6550 15898 0.679505 TCACTCACCCGGTTCTTCTG 59.320 55.000 0.00 0.00 0.00 3.02
6551 15899 0.320771 CACTCACCCGGTTCTTCTGG 60.321 60.000 0.00 0.00 42.06 3.86
6552 15900 0.763223 ACTCACCCGGTTCTTCTGGT 60.763 55.000 0.00 0.00 40.86 4.00
6553 15901 0.396811 CTCACCCGGTTCTTCTGGTT 59.603 55.000 0.00 0.00 40.86 3.67
6554 15902 0.841289 TCACCCGGTTCTTCTGGTTT 59.159 50.000 0.00 0.00 40.86 3.27
6555 15903 0.951558 CACCCGGTTCTTCTGGTTTG 59.048 55.000 0.00 0.00 40.86 2.93
6556 15904 0.822121 ACCCGGTTCTTCTGGTTTGC 60.822 55.000 0.00 0.00 40.86 3.68
6559 15907 1.001378 CCGGTTCTTCTGGTTTGCTTG 60.001 52.381 0.00 0.00 37.78 4.01
6569 15917 5.738619 TCTGGTTTGCTTGTAGTATGAGA 57.261 39.130 0.00 0.00 0.00 3.27
6571 15919 6.711277 TCTGGTTTGCTTGTAGTATGAGAAT 58.289 36.000 0.00 0.00 0.00 2.40
6591 15939 6.223852 AGAATCTCATTTGTGTGTCTACGTT 58.776 36.000 0.00 0.00 0.00 3.99
6594 15942 5.353111 TCTCATTTGTGTGTCTACGTTTGA 58.647 37.500 0.00 0.00 0.00 2.69
6595 15943 5.462068 TCTCATTTGTGTGTCTACGTTTGAG 59.538 40.000 0.00 0.00 0.00 3.02
6597 15945 3.530265 TTGTGTGTCTACGTTTGAGGT 57.470 42.857 0.00 0.00 0.00 3.85
6598 15946 3.088194 TGTGTGTCTACGTTTGAGGTC 57.912 47.619 0.00 0.00 0.00 3.85
6599 15947 2.427812 TGTGTGTCTACGTTTGAGGTCA 59.572 45.455 0.00 0.00 0.00 4.02
6600 15948 3.119065 TGTGTGTCTACGTTTGAGGTCAA 60.119 43.478 0.00 0.00 0.00 3.18
6601 15949 3.866910 GTGTGTCTACGTTTGAGGTCAAA 59.133 43.478 0.00 0.87 42.90 2.69
6603 15951 4.936411 TGTGTCTACGTTTGAGGTCAAAAA 59.064 37.500 6.72 0.00 46.08 1.94
6623 15971 4.682021 AAAGAAGGGGAATCTCATTGGT 57.318 40.909 0.00 0.00 0.00 3.67
6624 15972 4.682021 AAGAAGGGGAATCTCATTGGTT 57.318 40.909 0.00 0.00 0.00 3.67
6625 15973 3.973425 AGAAGGGGAATCTCATTGGTTG 58.027 45.455 0.00 0.00 0.00 3.77
6629 15977 2.760650 GGGGAATCTCATTGGTTGGTTC 59.239 50.000 0.00 0.00 0.00 3.62
6630 15978 3.430453 GGGAATCTCATTGGTTGGTTCA 58.570 45.455 0.00 0.00 0.00 3.18
6631 15979 4.026052 GGGAATCTCATTGGTTGGTTCAT 58.974 43.478 0.00 0.00 0.00 2.57
6632 15980 4.098501 GGGAATCTCATTGGTTGGTTCATC 59.901 45.833 0.00 0.00 0.00 2.92
6633 15981 4.098501 GGAATCTCATTGGTTGGTTCATCC 59.901 45.833 0.00 0.00 0.00 3.51
6634 15982 4.598036 ATCTCATTGGTTGGTTCATCCT 57.402 40.909 0.00 0.00 37.07 3.24
6635 15983 3.689347 TCTCATTGGTTGGTTCATCCTG 58.311 45.455 0.00 0.00 37.07 3.86
6636 15984 3.330405 TCTCATTGGTTGGTTCATCCTGA 59.670 43.478 0.00 0.00 37.07 3.86
6655 16026 4.458397 CTGATGTGTGAAGGATAGCCAAT 58.542 43.478 0.00 0.00 36.29 3.16
6658 16029 6.604171 TGATGTGTGAAGGATAGCCAATAAT 58.396 36.000 0.00 0.00 36.29 1.28
6662 16033 6.543465 TGTGTGAAGGATAGCCAATAATCAAG 59.457 38.462 0.00 0.00 36.29 3.02
6663 16034 6.543831 GTGTGAAGGATAGCCAATAATCAAGT 59.456 38.462 0.00 0.00 36.29 3.16
6664 16035 6.767902 TGTGAAGGATAGCCAATAATCAAGTC 59.232 38.462 0.00 0.00 36.29 3.01
6667 16038 5.874093 AGGATAGCCAATAATCAAGTCCAG 58.126 41.667 0.00 0.00 36.29 3.86
6690 16061 2.032981 GTGTGGCACCAAACCTGAG 58.967 57.895 16.26 0.00 0.00 3.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 6.157123 TGGTCTTGTAAGGGTTGGAAAATTTT 59.843 34.615 2.28 2.28 0.00 1.82
72 75 4.287067 AGTGTAGGAGGAACATGATGTTGT 59.713 41.667 16.52 2.32 41.28 3.32
103 106 2.391879 GAGCTTTACTCACGACGTGTT 58.608 47.619 26.01 16.95 45.49 3.32
194 3941 1.107114 TCTTCTGGCTCCGACTGATC 58.893 55.000 0.00 0.00 0.00 2.92
196 3943 0.891373 CTTCTTCTGGCTCCGACTGA 59.109 55.000 0.00 0.00 0.00 3.41
198 3945 1.594310 GCTTCTTCTGGCTCCGACT 59.406 57.895 0.00 0.00 0.00 4.18
231 3978 0.179161 GGACGGCGATCATATCCTCG 60.179 60.000 16.62 0.15 37.92 4.63
290 4037 4.956700 TCCTCAGTTTAGTCTCATCGGATT 59.043 41.667 0.00 0.00 0.00 3.01
297 4044 2.180276 GGCCTCCTCAGTTTAGTCTCA 58.820 52.381 0.00 0.00 0.00 3.27
298 4045 2.462723 AGGCCTCCTCAGTTTAGTCTC 58.537 52.381 0.00 0.00 0.00 3.36
364 4111 5.344884 GTCCTTTAGATTCTTCTCCGTCTG 58.655 45.833 0.00 0.00 33.17 3.51
365 4112 4.403113 GGTCCTTTAGATTCTTCTCCGTCT 59.597 45.833 0.00 0.00 33.17 4.18
384 4131 1.837439 TGATGGTCTGTGTATGGGTCC 59.163 52.381 0.00 0.00 0.00 4.46
386 4133 1.559682 GGTGATGGTCTGTGTATGGGT 59.440 52.381 0.00 0.00 0.00 4.51
388 4135 3.348647 TTGGTGATGGTCTGTGTATGG 57.651 47.619 0.00 0.00 0.00 2.74
480 4500 9.474920 AATGGTGTGTTATTTGTTGTAATGAAG 57.525 29.630 0.00 0.00 0.00 3.02
504 4528 7.177216 TGACAATCTGGCTGACAAAAATAGAAT 59.823 33.333 0.00 0.00 0.00 2.40
528 4552 2.549992 CCTTTGTCACCCGAGATTGTGA 60.550 50.000 0.00 0.00 39.08 3.58
612 9443 7.748691 TTTTCTTTACCGTGCCTTACTTATT 57.251 32.000 0.00 0.00 0.00 1.40
617 9448 5.678132 TCTTTTTCTTTACCGTGCCTTAC 57.322 39.130 0.00 0.00 0.00 2.34
629 9460 5.612725 TCTTGGGTTGCATCTTTTTCTTT 57.387 34.783 0.00 0.00 0.00 2.52
632 9463 6.676237 TTTTTCTTGGGTTGCATCTTTTTC 57.324 33.333 0.00 0.00 0.00 2.29
665 9496 7.416438 GCATGAATGGATGGATAGATGGATTTC 60.416 40.741 0.00 0.00 0.00 2.17
703 9541 1.079612 CAGTGTGCGGCAGAGATGA 60.080 57.895 1.18 0.00 0.00 2.92
751 9592 1.144936 CAGACGAGGATGAAGGGGC 59.855 63.158 0.00 0.00 0.00 5.80
775 9616 1.422024 TCATTTCACGGAAAGGGGACA 59.578 47.619 9.90 0.00 34.64 4.02
825 9671 1.669760 CTCGGCGTGGGTTTTAGCA 60.670 57.895 6.85 0.00 0.00 3.49
993 9842 1.984026 GTTCCCCACCATGCCCAAG 60.984 63.158 0.00 0.00 0.00 3.61
1019 9868 2.686470 CCCTCTCCTGCAGCTCCA 60.686 66.667 8.66 0.00 0.00 3.86
1163 10012 2.476199 CCTCTCCACCATTCTCCTTCT 58.524 52.381 0.00 0.00 0.00 2.85
1176 10031 2.829384 AAACTTGCCGCCCTCTCCA 61.829 57.895 0.00 0.00 0.00 3.86
1273 10128 1.400759 GCAGCAAGCTGAGCACTAAAC 60.401 52.381 25.03 0.79 46.30 2.01
1287 10146 2.349580 CGATCGAAGAATCAAGCAGCAA 59.650 45.455 10.26 0.00 43.58 3.91
1303 10262 0.806102 ACAGCGATTTGGGTCGATCG 60.806 55.000 9.36 9.36 45.81 3.69
1321 10280 3.620374 CACACTAACAGCATCAGATGGAC 59.380 47.826 12.54 0.00 34.87 4.02
1375 10334 6.821160 CAGATACAACTCTCTGTCTCTCTGTA 59.179 42.308 0.00 0.00 32.19 2.74
1480 10441 4.558860 GGCGCAAGATTCACAAAATAGAAC 59.441 41.667 10.83 0.00 43.02 3.01
1483 10444 4.095410 TGGCGCAAGATTCACAAAATAG 57.905 40.909 10.83 0.00 43.02 1.73
1500 10464 4.984161 AGAATCTTTCAAAACAACATGGCG 59.016 37.500 0.00 0.00 0.00 5.69
1543 10507 6.679327 GGAACACTTTATCTATTCCCACAC 57.321 41.667 0.00 0.00 34.01 3.82
1588 10561 1.407437 CCGAGGAAATTCCCCTGTCAG 60.407 57.143 8.66 0.00 37.19 3.51
1668 10644 7.554959 AGGACAACTGAACTAAGGAAGATTA 57.445 36.000 0.00 0.00 0.00 1.75
1696 10672 3.056107 TGTGGTAAACTCTTCCATCCTCG 60.056 47.826 0.00 0.00 33.68 4.63
1881 10860 2.095466 TGTAAACGCATTAAGGCAGCAC 60.095 45.455 13.17 4.76 0.00 4.40
1911 10950 5.529791 ACTAGTGCGTGGAATCACATATAC 58.470 41.667 0.00 0.00 43.79 1.47
1925 10964 2.100989 CTTCCCCTCTTACTAGTGCGT 58.899 52.381 5.39 0.00 0.00 5.24
1940 10979 7.039993 TGCCTCTTTGTTTCTATTTTACTTCCC 60.040 37.037 0.00 0.00 0.00 3.97
1988 11110 2.988493 CGGGCATTGTTGAAATGAAGTG 59.012 45.455 2.33 0.00 0.00 3.16
2019 11141 7.282585 TGGACTCCAATACTTCTGATTTATGG 58.717 38.462 0.00 0.00 0.00 2.74
2088 11211 4.202131 GGTACTCCTCGTGAAGGGATTAAG 60.202 50.000 0.00 0.00 46.23 1.85
2154 11277 1.271926 ACCATTTCACCACTACCTGGC 60.272 52.381 0.00 0.00 45.32 4.85
2162 11285 4.942852 TGAAAACATCACCATTTCACCAC 58.057 39.130 0.00 0.00 37.95 4.16
2192 11315 8.477419 ACTTTGGAAAAATTTATCCACAGAGA 57.523 30.769 19.79 3.74 45.14 3.10
2197 11320 8.251026 CCCTCTACTTTGGAAAAATTTATCCAC 58.749 37.037 8.44 0.00 45.14 4.02
2202 11325 9.594936 TTCATCCCTCTACTTTGGAAAAATTTA 57.405 29.630 0.00 0.00 0.00 1.40
2205 11328 8.670521 ATTTCATCCCTCTACTTTGGAAAAAT 57.329 30.769 0.00 0.00 0.00 1.82
2226 11349 6.975197 GGTCCTGAGCTTTAATGCTAAATTTC 59.025 38.462 15.21 3.90 44.17 2.17
2253 11376 6.478512 TCAGAAAAGGGTAAAATGCACTTT 57.521 33.333 0.00 0.00 40.87 2.66
2307 11430 9.462174 TGCAATAATTTACTCAAACAGAAACAG 57.538 29.630 0.00 0.00 0.00 3.16
2308 11431 9.979578 ATGCAATAATTTACTCAAACAGAAACA 57.020 25.926 0.00 0.00 0.00 2.83
2310 11433 9.421806 CCATGCAATAATTTACTCAAACAGAAA 57.578 29.630 0.00 0.00 0.00 2.52
2311 11434 8.584157 ACCATGCAATAATTTACTCAAACAGAA 58.416 29.630 0.00 0.00 0.00 3.02
2312 11435 8.121305 ACCATGCAATAATTTACTCAAACAGA 57.879 30.769 0.00 0.00 0.00 3.41
2320 11443 7.832769 ACCGTTAAACCATGCAATAATTTACT 58.167 30.769 0.00 0.00 0.00 2.24
2333 11456 1.746470 GCTGCCTACCGTTAAACCAT 58.254 50.000 0.00 0.00 0.00 3.55
2414 11537 5.410746 CACAACATCTGAATAGCACTTGTCT 59.589 40.000 0.00 0.00 0.00 3.41
2417 11540 4.673580 GCCACAACATCTGAATAGCACTTG 60.674 45.833 0.00 0.00 0.00 3.16
2502 11625 2.290705 GCCACCCAATTGTACTACACCT 60.291 50.000 4.43 0.00 0.00 4.00
2505 11628 3.265737 AGATGCCACCCAATTGTACTACA 59.734 43.478 4.43 0.00 0.00 2.74
2593 11717 5.806286 CAAGTACTTGTTAACAGTGTGTGG 58.194 41.667 24.70 7.06 35.92 4.17
2723 11847 4.097286 GTGTTGCCACTTTGACCTTTTAGA 59.903 41.667 0.00 0.00 38.61 2.10
2825 11949 5.946377 GGTTAAGAAGTGACCCATCTCAATT 59.054 40.000 0.00 0.00 31.30 2.32
2849 11973 2.128035 GAGCGTCCATCATAACGGAAG 58.872 52.381 0.00 0.00 39.24 3.46
2871 11995 7.890127 TCCATCAAAGATAACCACTGAGAATTT 59.110 33.333 0.00 0.00 0.00 1.82
3250 12374 7.010830 CAGAGTCATTTGCATCGATTTCTCTAA 59.989 37.037 0.00 0.00 0.00 2.10
3251 12375 6.478016 CAGAGTCATTTGCATCGATTTCTCTA 59.522 38.462 0.00 0.00 0.00 2.43
3252 12376 5.293814 CAGAGTCATTTGCATCGATTTCTCT 59.706 40.000 0.00 0.00 0.00 3.10
3253 12377 5.499935 CAGAGTCATTTGCATCGATTTCTC 58.500 41.667 0.00 0.00 0.00 2.87
3254 12378 4.201891 GCAGAGTCATTTGCATCGATTTCT 60.202 41.667 0.00 0.00 40.02 2.52
3255 12379 4.033684 GCAGAGTCATTTGCATCGATTTC 58.966 43.478 0.00 0.00 40.02 2.17
3256 12380 3.441222 TGCAGAGTCATTTGCATCGATTT 59.559 39.130 0.00 0.00 44.72 2.17
3257 12381 3.011818 TGCAGAGTCATTTGCATCGATT 58.988 40.909 0.00 0.00 44.72 3.34
3258 12382 2.635714 TGCAGAGTCATTTGCATCGAT 58.364 42.857 1.62 0.00 44.72 3.59
3259 12383 2.097680 TGCAGAGTCATTTGCATCGA 57.902 45.000 1.62 0.00 44.72 3.59
3264 12388 2.357327 TGCAATGCAGAGTCATTTGC 57.643 45.000 2.72 11.12 40.67 3.68
3275 12399 2.156917 CTCAAGGACTTCTGCAATGCA 58.843 47.619 7.99 7.99 36.92 3.96
3276 12400 1.471684 CCTCAAGGACTTCTGCAATGC 59.528 52.381 0.00 0.00 37.39 3.56
3277 12401 2.089980 CCCTCAAGGACTTCTGCAATG 58.910 52.381 0.00 0.00 38.24 2.82
3278 12402 1.707427 ACCCTCAAGGACTTCTGCAAT 59.293 47.619 0.00 0.00 39.89 3.56
3279 12403 1.140312 ACCCTCAAGGACTTCTGCAA 58.860 50.000 0.00 0.00 39.89 4.08
3280 12404 1.140312 AACCCTCAAGGACTTCTGCA 58.860 50.000 0.00 0.00 39.89 4.41
3281 12405 2.567615 TCTAACCCTCAAGGACTTCTGC 59.432 50.000 0.00 0.00 39.89 4.26
3282 12406 4.090090 TCTCTAACCCTCAAGGACTTCTG 58.910 47.826 0.00 0.00 39.89 3.02
3283 12407 4.405756 TCTCTAACCCTCAAGGACTTCT 57.594 45.455 0.00 0.00 39.89 2.85
3284 12408 5.485209 TTTCTCTAACCCTCAAGGACTTC 57.515 43.478 0.00 0.00 39.89 3.01
3285 12409 5.337652 CGATTTCTCTAACCCTCAAGGACTT 60.338 44.000 0.00 0.00 39.89 3.01
3286 12410 4.160626 CGATTTCTCTAACCCTCAAGGACT 59.839 45.833 0.00 0.00 39.89 3.85
3287 12411 4.159879 TCGATTTCTCTAACCCTCAAGGAC 59.840 45.833 0.00 0.00 39.89 3.85
3288 12412 4.350245 TCGATTTCTCTAACCCTCAAGGA 58.650 43.478 0.00 0.00 39.89 3.36
3289 12413 4.737855 TCGATTTCTCTAACCCTCAAGG 57.262 45.455 0.00 0.00 43.78 3.61
3290 12414 4.509600 GCATCGATTTCTCTAACCCTCAAG 59.490 45.833 0.00 0.00 0.00 3.02
3291 12415 4.081142 TGCATCGATTTCTCTAACCCTCAA 60.081 41.667 0.00 0.00 0.00 3.02
3292 12416 3.450817 TGCATCGATTTCTCTAACCCTCA 59.549 43.478 0.00 0.00 0.00 3.86
3293 12417 4.060038 TGCATCGATTTCTCTAACCCTC 57.940 45.455 0.00 0.00 0.00 4.30
3294 12418 4.487714 TTGCATCGATTTCTCTAACCCT 57.512 40.909 0.00 0.00 0.00 4.34
3295 12419 5.506317 CCATTTGCATCGATTTCTCTAACCC 60.506 44.000 0.00 0.00 0.00 4.11
3380 12504 3.453059 TCTCTAACCCTCGAGGACTTT 57.547 47.619 33.39 22.50 39.89 2.66
3422 12546 1.482593 CTAACCCTCGAGGACTGCAAT 59.517 52.381 33.39 12.08 39.89 3.56
3423 12547 0.895530 CTAACCCTCGAGGACTGCAA 59.104 55.000 33.39 10.46 39.89 4.08
3424 12548 0.039180 TCTAACCCTCGAGGACTGCA 59.961 55.000 33.39 10.58 39.89 4.41
3425 12549 0.741915 CTCTAACCCTCGAGGACTGC 59.258 60.000 33.39 0.00 39.89 4.40
3426 12550 2.421751 TCTCTAACCCTCGAGGACTG 57.578 55.000 33.39 18.44 39.89 3.51
3427 12551 3.453059 TTTCTCTAACCCTCGAGGACT 57.547 47.619 33.39 20.39 39.89 3.85
3428 12552 3.243134 CGATTTCTCTAACCCTCGAGGAC 60.243 52.174 33.39 7.60 39.89 3.85
3429 12553 2.950309 CGATTTCTCTAACCCTCGAGGA 59.050 50.000 33.39 12.34 39.89 3.71
3430 12554 2.950309 TCGATTTCTCTAACCCTCGAGG 59.050 50.000 25.36 25.36 43.78 4.63
3431 12555 4.541779 CATCGATTTCTCTAACCCTCGAG 58.458 47.826 5.13 5.13 38.37 4.04
3432 12556 3.243434 GCATCGATTTCTCTAACCCTCGA 60.243 47.826 0.00 0.00 39.18 4.04
3433 12557 3.053455 GCATCGATTTCTCTAACCCTCG 58.947 50.000 0.00 0.00 0.00 4.63
3434 12558 4.060038 TGCATCGATTTCTCTAACCCTC 57.940 45.455 0.00 0.00 0.00 4.30
3435 12559 4.487714 TTGCATCGATTTCTCTAACCCT 57.512 40.909 0.00 0.00 0.00 4.34
3436 12560 5.296780 TCATTTGCATCGATTTCTCTAACCC 59.703 40.000 0.00 0.00 0.00 4.11
3437 12561 6.258727 TCTCATTTGCATCGATTTCTCTAACC 59.741 38.462 0.00 0.00 0.00 2.85
3438 12562 7.010923 AGTCTCATTTGCATCGATTTCTCTAAC 59.989 37.037 0.00 0.00 0.00 2.34
3439 12563 7.010830 CAGTCTCATTTGCATCGATTTCTCTAA 59.989 37.037 0.00 0.00 0.00 2.10
3440 12564 6.478016 CAGTCTCATTTGCATCGATTTCTCTA 59.522 38.462 0.00 0.00 0.00 2.43
3441 12565 5.293814 CAGTCTCATTTGCATCGATTTCTCT 59.706 40.000 0.00 0.00 0.00 3.10
3442 12566 5.499935 CAGTCTCATTTGCATCGATTTCTC 58.500 41.667 0.00 0.00 0.00 2.87
3443 12567 4.201891 GCAGTCTCATTTGCATCGATTTCT 60.202 41.667 0.00 0.00 40.02 2.52
3444 12568 4.033684 GCAGTCTCATTTGCATCGATTTC 58.966 43.478 0.00 0.00 40.02 2.17
3445 12569 3.441222 TGCAGTCTCATTTGCATCGATTT 59.559 39.130 0.00 0.00 44.72 2.17
3446 12570 3.011818 TGCAGTCTCATTTGCATCGATT 58.988 40.909 0.00 0.00 44.72 3.34
3447 12571 2.635714 TGCAGTCTCATTTGCATCGAT 58.364 42.857 0.00 0.00 44.72 3.59
3448 12572 2.097680 TGCAGTCTCATTTGCATCGA 57.902 45.000 0.00 0.00 44.72 3.59
3453 12577 1.990563 GTGCAATGCAGTCTCATTTGC 59.009 47.619 8.73 11.12 40.08 3.68
3454 12578 3.291809 TGTGCAATGCAGTCTCATTTG 57.708 42.857 8.73 0.00 40.08 2.32
3455 12579 3.319972 ACTTGTGCAATGCAGTCTCATTT 59.680 39.130 8.73 0.00 40.08 2.32
3456 12580 2.889045 ACTTGTGCAATGCAGTCTCATT 59.111 40.909 8.73 0.00 40.08 2.57
3457 12581 2.486982 GACTTGTGCAATGCAGTCTCAT 59.513 45.455 8.73 0.00 40.08 2.90
3458 12582 1.875514 GACTTGTGCAATGCAGTCTCA 59.124 47.619 8.73 0.00 40.08 3.27
3459 12583 1.198637 GGACTTGTGCAATGCAGTCTC 59.801 52.381 20.35 10.64 40.08 3.36
3460 12584 1.202855 AGGACTTGTGCAATGCAGTCT 60.203 47.619 20.35 8.39 40.08 3.24
3461 12585 1.198637 GAGGACTTGTGCAATGCAGTC 59.801 52.381 8.73 12.79 40.08 3.51
3462 12586 1.242076 GAGGACTTGTGCAATGCAGT 58.758 50.000 8.73 2.62 40.08 4.40
3463 12587 0.167470 CGAGGACTTGTGCAATGCAG 59.833 55.000 8.73 0.00 40.08 4.41
3464 12588 0.250252 TCGAGGACTTGTGCAATGCA 60.250 50.000 2.72 2.72 35.60 3.96
3465 12589 0.445436 CTCGAGGACTTGTGCAATGC 59.555 55.000 3.91 0.00 0.00 3.56
3608 12780 0.391661 TCGAGGACTTCTGCAATGCC 60.392 55.000 1.53 0.00 0.00 4.40
3970 13238 2.294233 CACTACACATTGCTGGCTTGTT 59.706 45.455 0.00 0.00 0.00 2.83
3979 13247 5.937165 CAAATATGCACACTACACATTGC 57.063 39.130 0.00 0.00 35.45 3.56
4011 13279 1.544724 TGGCACAAGTCCTTTATGCC 58.455 50.000 18.81 18.81 45.63 4.40
4089 13357 7.092891 ACACACCAGATGACCTTCTGAATTATA 60.093 37.037 12.70 0.00 44.88 0.98
4155 13423 9.775539 ATGATATTAGCCATCTCTAACCTAGAA 57.224 33.333 0.00 0.00 33.75 2.10
4753 14045 2.684881 CCAAACAACACTCAGTGCTCTT 59.315 45.455 4.13 0.00 36.98 2.85
4754 14046 2.292267 CCAAACAACACTCAGTGCTCT 58.708 47.619 4.13 0.00 36.98 4.09
4755 14047 2.017049 ACCAAACAACACTCAGTGCTC 58.983 47.619 4.13 0.00 36.98 4.26
4756 14048 2.128771 ACCAAACAACACTCAGTGCT 57.871 45.000 4.13 0.00 36.98 4.40
4757 14049 2.529151 CAACCAAACAACACTCAGTGC 58.471 47.619 4.13 0.00 36.98 4.40
4758 14050 2.735126 GCCAACCAAACAACACTCAGTG 60.735 50.000 2.22 2.22 39.75 3.66
4759 14051 1.476488 GCCAACCAAACAACACTCAGT 59.524 47.619 0.00 0.00 0.00 3.41
4760 14052 1.750778 AGCCAACCAAACAACACTCAG 59.249 47.619 0.00 0.00 0.00 3.35
4762 14054 2.287608 GCTAGCCAACCAAACAACACTC 60.288 50.000 2.29 0.00 0.00 3.51
4763 14055 1.681264 GCTAGCCAACCAAACAACACT 59.319 47.619 2.29 0.00 0.00 3.55
4768 14083 1.317613 CACAGCTAGCCAACCAAACA 58.682 50.000 12.13 0.00 0.00 2.83
5037 14352 6.491745 ACATACTCCATCACTCGAGTTATCAT 59.508 38.462 17.26 2.73 39.92 2.45
5061 14376 8.250332 ACATGTATAATTTGGATTGACAACCAC 58.750 33.333 0.00 0.00 35.81 4.16
5149 14464 4.601406 TGGGTTACTAATTTGGCAGGAT 57.399 40.909 0.00 0.00 0.00 3.24
5153 14468 7.736447 CAAATTTTGGGTTACTAATTTGGCA 57.264 32.000 0.00 0.00 41.13 4.92
5170 14485 5.480422 CCTAAACTAGGTCAGCCCAAATTTT 59.520 40.000 0.00 0.00 41.18 1.82
5224 14539 7.816640 TGCTATTCATTCAGTGGTAAGAAAAC 58.183 34.615 0.00 0.00 0.00 2.43
5229 14546 5.240183 CCCATGCTATTCATTCAGTGGTAAG 59.760 44.000 0.00 0.00 31.79 2.34
5249 14567 4.226384 GGATTTATTTCAGGCCTTCCCAT 58.774 43.478 0.00 0.00 35.39 4.00
5250 14568 3.012274 TGGATTTATTTCAGGCCTTCCCA 59.988 43.478 0.00 0.00 35.39 4.37
5251 14569 3.638627 CTGGATTTATTTCAGGCCTTCCC 59.361 47.826 0.00 0.00 0.00 3.97
5252 14570 3.638627 CCTGGATTTATTTCAGGCCTTCC 59.361 47.826 0.00 5.56 41.12 3.46
5253 14571 3.638627 CCCTGGATTTATTTCAGGCCTTC 59.361 47.826 0.00 0.00 44.87 3.46
5275 14593 3.924238 CACGGGTGCTTGCATATTC 57.076 52.632 0.00 0.00 0.00 1.75
5367 14685 5.064707 AGGCAATGATCAAATACACACGTAC 59.935 40.000 0.00 0.00 0.00 3.67
5371 14689 8.810427 CAAATAAGGCAATGATCAAATACACAC 58.190 33.333 0.00 0.00 0.00 3.82
5741 15059 8.868522 TTTCAGATAATGGAAGAGAACATTGT 57.131 30.769 0.00 0.00 37.80 2.71
5769 15087 0.326264 GCAGACAGACCCCTGACAAT 59.674 55.000 0.00 0.00 43.02 2.71
5770 15088 1.053835 TGCAGACAGACCCCTGACAA 61.054 55.000 0.00 0.00 43.02 3.18
5772 15090 0.326264 ATTGCAGACAGACCCCTGAC 59.674 55.000 0.00 0.00 43.02 3.51
5774 15092 1.457346 GAATTGCAGACAGACCCCTG 58.543 55.000 0.00 0.00 45.76 4.45
5775 15093 0.329596 GGAATTGCAGACAGACCCCT 59.670 55.000 0.00 0.00 0.00 4.79
5778 15096 1.168714 GGTGGAATTGCAGACAGACC 58.831 55.000 0.00 0.00 0.00 3.85
5780 15098 0.684535 TCGGTGGAATTGCAGACAGA 59.315 50.000 0.00 0.00 0.00 3.41
5781 15099 1.667724 GATCGGTGGAATTGCAGACAG 59.332 52.381 0.00 0.00 0.00 3.51
5782 15100 1.678728 GGATCGGTGGAATTGCAGACA 60.679 52.381 0.00 0.00 0.00 3.41
5783 15101 1.017387 GGATCGGTGGAATTGCAGAC 58.983 55.000 0.00 0.00 0.00 3.51
5784 15102 0.617935 TGGATCGGTGGAATTGCAGA 59.382 50.000 0.00 0.00 0.00 4.26
5785 15103 1.335810 CATGGATCGGTGGAATTGCAG 59.664 52.381 0.00 0.00 0.00 4.41
5786 15104 1.391577 CATGGATCGGTGGAATTGCA 58.608 50.000 0.00 0.00 0.00 4.08
5787 15105 0.670162 CCATGGATCGGTGGAATTGC 59.330 55.000 5.56 0.00 37.72 3.56
5788 15106 0.670162 GCCATGGATCGGTGGAATTG 59.330 55.000 18.40 0.00 37.72 2.32
5789 15107 0.468029 GGCCATGGATCGGTGGAATT 60.468 55.000 18.40 0.00 37.72 2.17
5790 15108 1.151450 GGCCATGGATCGGTGGAAT 59.849 57.895 18.40 0.00 37.72 3.01
5792 15110 2.613576 TAGGGCCATGGATCGGTGGA 62.614 60.000 18.40 0.00 37.72 4.02
5794 15112 1.121407 TCTAGGGCCATGGATCGGTG 61.121 60.000 18.40 0.04 0.00 4.94
5795 15113 0.399949 TTCTAGGGCCATGGATCGGT 60.400 55.000 18.40 0.31 0.00 4.69
5796 15114 0.322975 CTTCTAGGGCCATGGATCGG 59.677 60.000 18.40 5.34 0.00 4.18
5797 15115 0.322975 CCTTCTAGGGCCATGGATCG 59.677 60.000 18.40 0.00 0.00 3.69
5799 15117 2.158780 GCCTTCTAGGGCCATGGAT 58.841 57.895 18.40 2.45 45.92 3.41
5800 15118 3.660724 GCCTTCTAGGGCCATGGA 58.339 61.111 18.40 0.41 45.92 3.41
5807 15125 7.888250 ATTTTCTTCTTATTGCCTTCTAGGG 57.112 36.000 0.00 0.00 35.37 3.53
5877 15222 6.149308 CACAATCCAACAAGAACATAGCTACA 59.851 38.462 0.00 0.00 0.00 2.74
5892 15237 4.007659 ACCGATTTACTCCACAATCCAAC 58.992 43.478 0.00 0.00 0.00 3.77
5920 15265 6.673154 TTATTCTCGAACAGATACGACAGA 57.327 37.500 0.00 0.00 34.82 3.41
5922 15267 6.134061 CGATTATTCTCGAACAGATACGACA 58.866 40.000 0.00 0.00 41.12 4.35
5944 15289 2.100031 CGGCAGCAATGCTACACGA 61.100 57.895 7.70 0.00 36.40 4.35
5962 15307 7.432869 TGGCCATATAATGCAGAATTACAAAC 58.567 34.615 0.00 0.00 33.53 2.93
5969 15314 4.015084 GCTCTGGCCATATAATGCAGAAT 58.985 43.478 5.51 0.00 31.86 2.40
5981 15326 2.158505 AGAAATAGCATGCTCTGGCCAT 60.159 45.455 26.57 8.17 37.74 4.40
5984 15329 3.737850 AGTAGAAATAGCATGCTCTGGC 58.262 45.455 26.57 12.73 39.26 4.85
5985 15330 5.011533 ACCTAGTAGAAATAGCATGCTCTGG 59.988 44.000 26.57 14.56 0.00 3.86
6018 15363 7.475137 AATTATAACTGCAAACTAAAGGGCA 57.525 32.000 0.00 0.00 34.66 5.36
6025 15370 8.495361 TCGCCTAAAATTATAACTGCAAACTA 57.505 30.769 0.00 0.00 0.00 2.24
6041 15386 5.312120 TGTCAACAAGTTTTCGCCTAAAA 57.688 34.783 0.00 0.00 34.66 1.52
6045 15390 4.518970 ACATATGTCAACAAGTTTTCGCCT 59.481 37.500 1.41 0.00 0.00 5.52
6046 15391 4.794169 ACATATGTCAACAAGTTTTCGCC 58.206 39.130 1.41 0.00 0.00 5.54
6047 15392 5.685511 ACAACATATGTCAACAAGTTTTCGC 59.314 36.000 9.23 0.00 37.96 4.70
6048 15393 7.546277 CAACAACATATGTCAACAAGTTTTCG 58.454 34.615 9.23 0.00 42.99 3.46
6049 15394 7.009999 TGCAACAACATATGTCAACAAGTTTTC 59.990 33.333 9.23 3.66 42.99 2.29
6062 15407 5.074134 CACGCAAAAATGCAACAACATATG 58.926 37.500 0.00 0.00 34.41 1.78
6063 15408 4.987285 TCACGCAAAAATGCAACAACATAT 59.013 33.333 0.00 0.00 34.41 1.78
6069 15414 5.164109 CGATAATTCACGCAAAAATGCAACA 60.164 36.000 0.00 0.00 34.41 3.33
6085 15430 6.366332 AGGCAGACATTATTCGACGATAATTC 59.634 38.462 0.00 6.35 31.52 2.17
6086 15431 6.146184 CAGGCAGACATTATTCGACGATAATT 59.854 38.462 0.00 0.00 31.52 1.40
6124 15469 6.907961 AGCACATATCATTATCAGCCCATAT 58.092 36.000 0.00 0.00 0.00 1.78
6125 15470 6.317663 AGCACATATCATTATCAGCCCATA 57.682 37.500 0.00 0.00 0.00 2.74
6150 15496 1.473080 GGCCAGAGATGAGAAGCAGTC 60.473 57.143 0.00 0.00 0.00 3.51
6158 15504 1.380524 CAAAGCTGGCCAGAGATGAG 58.619 55.000 37.21 15.67 0.00 2.90
6197 15544 1.738099 GCACACTAGAGCCACGTGG 60.738 63.158 30.66 30.66 38.53 4.94
6217 15564 4.392940 CTTTCATCACTCAACCCTTCAGT 58.607 43.478 0.00 0.00 0.00 3.41
6225 15572 6.865205 CCAATTTTCTCCTTTCATCACTCAAC 59.135 38.462 0.00 0.00 0.00 3.18
6229 15576 6.739565 GCAACCAATTTTCTCCTTTCATCACT 60.740 38.462 0.00 0.00 0.00 3.41
6248 15595 7.613801 ACCATAATATTTCACAGTTAGCAACCA 59.386 33.333 0.00 0.00 0.00 3.67
6264 15611 9.654919 ACAGGCCAAGTTAATAACCATAATATT 57.345 29.630 5.01 0.00 0.00 1.28
6267 15614 7.971368 AACAGGCCAAGTTAATAACCATAAT 57.029 32.000 5.01 0.00 0.00 1.28
6270 15617 6.016555 AGAAACAGGCCAAGTTAATAACCAT 58.983 36.000 13.20 0.00 0.00 3.55
6274 15621 4.770010 CCCAGAAACAGGCCAAGTTAATAA 59.230 41.667 13.20 0.00 0.00 1.40
6278 15625 1.777878 TCCCAGAAACAGGCCAAGTTA 59.222 47.619 13.20 0.00 0.00 2.24
6292 15639 3.913855 TGGCAACAGTTTTCCCAGA 57.086 47.368 0.00 0.00 46.17 3.86
6315 15662 3.501445 AGCAAGCAGATCACAAGAAAGTC 59.499 43.478 0.00 0.00 0.00 3.01
6316 15663 3.484407 AGCAAGCAGATCACAAGAAAGT 58.516 40.909 0.00 0.00 0.00 2.66
6340 15687 0.448197 GCTAGAAAGGAAACAGCGGC 59.552 55.000 0.00 0.00 0.00 6.53
6343 15690 3.187432 GTCACAGCTAGAAAGGAAACAGC 59.813 47.826 0.00 0.00 0.00 4.40
6349 15696 2.300152 CACAGGTCACAGCTAGAAAGGA 59.700 50.000 0.00 0.00 0.00 3.36
6351 15698 3.667497 TCACAGGTCACAGCTAGAAAG 57.333 47.619 0.00 0.00 0.00 2.62
6372 15720 5.557576 AGAATGGCAAGCTATGATCAGTA 57.442 39.130 0.09 0.00 0.00 2.74
6373 15721 4.434545 AGAATGGCAAGCTATGATCAGT 57.565 40.909 0.09 0.00 0.00 3.41
6379 15727 5.163281 AGATCCTAGAATGGCAAGCTATG 57.837 43.478 0.00 0.00 0.00 2.23
6381 15729 5.398236 AGTAGATCCTAGAATGGCAAGCTA 58.602 41.667 0.00 0.00 0.00 3.32
6394 15742 5.388548 TTGGGACAGAGGGAGTAGATCCTA 61.389 50.000 0.00 0.00 44.69 2.94
6397 15745 2.757894 TGGGACAGAGGGAGTAGATC 57.242 55.000 0.00 0.00 0.00 2.75
6398 15746 3.491766 TTTGGGACAGAGGGAGTAGAT 57.508 47.619 0.00 0.00 42.39 1.98
6399 15747 3.269592 TTTTGGGACAGAGGGAGTAGA 57.730 47.619 0.00 0.00 42.39 2.59
6400 15748 5.189934 ACTTATTTTGGGACAGAGGGAGTAG 59.810 44.000 0.00 0.00 42.39 2.57
6401 15749 5.045869 CACTTATTTTGGGACAGAGGGAGTA 60.046 44.000 0.00 0.00 42.39 2.59
6402 15750 3.916989 ACTTATTTTGGGACAGAGGGAGT 59.083 43.478 0.00 0.00 42.39 3.85
6403 15751 4.263506 ACACTTATTTTGGGACAGAGGGAG 60.264 45.833 0.00 0.00 42.39 4.30
6404 15752 3.655777 ACACTTATTTTGGGACAGAGGGA 59.344 43.478 0.00 0.00 42.39 4.20
6405 15753 4.010349 GACACTTATTTTGGGACAGAGGG 58.990 47.826 0.00 0.00 42.39 4.30
6406 15754 4.911390 AGACACTTATTTTGGGACAGAGG 58.089 43.478 0.00 0.00 42.39 3.69
6407 15755 5.551233 TGAGACACTTATTTTGGGACAGAG 58.449 41.667 0.00 0.00 42.39 3.35
6408 15756 5.560722 TGAGACACTTATTTTGGGACAGA 57.439 39.130 0.00 0.00 42.39 3.41
6409 15757 5.335191 GCTTGAGACACTTATTTTGGGACAG 60.335 44.000 0.00 0.00 42.39 3.51
6410 15758 4.518970 GCTTGAGACACTTATTTTGGGACA 59.481 41.667 0.00 0.00 0.00 4.02
6411 15759 4.762251 AGCTTGAGACACTTATTTTGGGAC 59.238 41.667 0.00 0.00 0.00 4.46
6412 15760 4.985538 AGCTTGAGACACTTATTTTGGGA 58.014 39.130 0.00 0.00 0.00 4.37
6413 15761 5.712152 AAGCTTGAGACACTTATTTTGGG 57.288 39.130 0.00 0.00 0.00 4.12
6415 15763 8.988934 TGTACTAAGCTTGAGACACTTATTTTG 58.011 33.333 9.86 0.00 0.00 2.44
6416 15764 9.555727 TTGTACTAAGCTTGAGACACTTATTTT 57.444 29.630 9.86 0.00 0.00 1.82
6417 15765 8.989980 GTTGTACTAAGCTTGAGACACTTATTT 58.010 33.333 9.86 0.00 0.00 1.40
6418 15766 8.368668 AGTTGTACTAAGCTTGAGACACTTATT 58.631 33.333 9.86 0.00 0.00 1.40
6419 15767 7.897864 AGTTGTACTAAGCTTGAGACACTTAT 58.102 34.615 9.86 0.00 0.00 1.73
6421 15769 6.163135 AGTTGTACTAAGCTTGAGACACTT 57.837 37.500 9.86 0.00 0.00 3.16
6423 15771 6.258068 ACAAAGTTGTACTAAGCTTGAGACAC 59.742 38.462 9.86 7.18 40.16 3.67
6424 15772 6.346096 ACAAAGTTGTACTAAGCTTGAGACA 58.654 36.000 9.86 7.12 40.16 3.41
6425 15773 6.846325 ACAAAGTTGTACTAAGCTTGAGAC 57.154 37.500 9.86 4.39 40.16 3.36
6448 15796 8.019669 CGTCTCAACTTTGTACTAGCTTTAGTA 58.980 37.037 0.00 0.00 0.00 1.82
6449 15797 6.862090 CGTCTCAACTTTGTACTAGCTTTAGT 59.138 38.462 0.00 0.00 0.00 2.24
6450 15798 6.183359 GCGTCTCAACTTTGTACTAGCTTTAG 60.183 42.308 0.00 0.00 0.00 1.85
6451 15799 5.632347 GCGTCTCAACTTTGTACTAGCTTTA 59.368 40.000 0.00 0.00 0.00 1.85
6452 15800 4.448060 GCGTCTCAACTTTGTACTAGCTTT 59.552 41.667 0.00 0.00 0.00 3.51
6453 15801 3.988517 GCGTCTCAACTTTGTACTAGCTT 59.011 43.478 0.00 0.00 0.00 3.74
6454 15802 3.256136 AGCGTCTCAACTTTGTACTAGCT 59.744 43.478 0.00 0.00 0.00 3.32
6455 15803 3.576648 AGCGTCTCAACTTTGTACTAGC 58.423 45.455 0.00 0.00 0.00 3.42
6456 15804 7.813852 AATAAGCGTCTCAACTTTGTACTAG 57.186 36.000 0.00 0.00 0.00 2.57
6457 15805 8.492748 CAAAATAAGCGTCTCAACTTTGTACTA 58.507 33.333 0.00 0.00 0.00 1.82
6458 15806 7.352739 CAAAATAAGCGTCTCAACTTTGTACT 58.647 34.615 0.00 0.00 0.00 2.73
6459 15807 6.577427 CCAAAATAAGCGTCTCAACTTTGTAC 59.423 38.462 0.00 0.00 0.00 2.90
6460 15808 6.483974 TCCAAAATAAGCGTCTCAACTTTGTA 59.516 34.615 0.00 0.00 0.00 2.41
6461 15809 5.298276 TCCAAAATAAGCGTCTCAACTTTGT 59.702 36.000 0.00 0.00 0.00 2.83
6462 15810 5.757886 TCCAAAATAAGCGTCTCAACTTTG 58.242 37.500 0.00 0.00 0.00 2.77
6463 15811 6.206498 GTTCCAAAATAAGCGTCTCAACTTT 58.794 36.000 0.00 0.00 0.00 2.66
6464 15812 5.560183 CGTTCCAAAATAAGCGTCTCAACTT 60.560 40.000 0.00 0.00 0.00 2.66
6465 15813 4.084013 CGTTCCAAAATAAGCGTCTCAACT 60.084 41.667 0.00 0.00 0.00 3.16
6466 15814 4.148891 CGTTCCAAAATAAGCGTCTCAAC 58.851 43.478 0.00 0.00 0.00 3.18
6467 15815 3.810941 ACGTTCCAAAATAAGCGTCTCAA 59.189 39.130 0.00 0.00 0.00 3.02
6468 15816 3.395639 ACGTTCCAAAATAAGCGTCTCA 58.604 40.909 0.00 0.00 0.00 3.27
6469 15817 5.445540 CCTTACGTTCCAAAATAAGCGTCTC 60.446 44.000 0.00 0.00 34.38 3.36
6470 15818 4.390909 CCTTACGTTCCAAAATAAGCGTCT 59.609 41.667 0.00 0.00 34.38 4.18
6471 15819 4.389687 TCCTTACGTTCCAAAATAAGCGTC 59.610 41.667 0.00 0.00 34.38 5.19
6472 15820 4.317488 TCCTTACGTTCCAAAATAAGCGT 58.683 39.130 0.00 0.00 36.52 5.07
6473 15821 4.390909 ACTCCTTACGTTCCAAAATAAGCG 59.609 41.667 0.00 0.00 0.00 4.68
6474 15822 5.874895 ACTCCTTACGTTCCAAAATAAGC 57.125 39.130 0.00 0.00 0.00 3.09
6475 15823 8.543862 AAGTACTCCTTACGTTCCAAAATAAG 57.456 34.615 0.00 0.00 35.61 1.73
6476 15824 9.643693 CTAAGTACTCCTTACGTTCCAAAATAA 57.356 33.333 0.00 0.00 35.61 1.40
6477 15825 8.806146 ACTAAGTACTCCTTACGTTCCAAAATA 58.194 33.333 0.00 0.00 35.61 1.40
6478 15826 7.674120 ACTAAGTACTCCTTACGTTCCAAAAT 58.326 34.615 0.00 0.00 35.61 1.82
6479 15827 7.054491 ACTAAGTACTCCTTACGTTCCAAAA 57.946 36.000 0.00 0.00 35.61 2.44
6480 15828 6.655078 ACTAAGTACTCCTTACGTTCCAAA 57.345 37.500 0.00 0.00 35.61 3.28
6481 15829 6.714810 TGTACTAAGTACTCCTTACGTTCCAA 59.285 38.462 0.00 0.00 39.49 3.53
6482 15830 6.149474 GTGTACTAAGTACTCCTTACGTTCCA 59.851 42.308 0.00 0.00 39.49 3.53
6483 15831 6.149474 TGTGTACTAAGTACTCCTTACGTTCC 59.851 42.308 0.00 0.00 39.49 3.62
6484 15832 7.133891 TGTGTACTAAGTACTCCTTACGTTC 57.866 40.000 0.00 0.00 39.49 3.95
6485 15833 7.510549 TTGTGTACTAAGTACTCCTTACGTT 57.489 36.000 0.00 0.00 39.49 3.99
6486 15834 7.175641 ACATTGTGTACTAAGTACTCCTTACGT 59.824 37.037 0.00 0.00 39.49 3.57
6487 15835 7.533426 ACATTGTGTACTAAGTACTCCTTACG 58.467 38.462 0.00 0.00 39.49 3.18
6488 15836 9.136952 CAACATTGTGTACTAAGTACTCCTTAC 57.863 37.037 0.00 0.00 39.49 2.34
6489 15837 9.081204 TCAACATTGTGTACTAAGTACTCCTTA 57.919 33.333 0.00 0.00 39.49 2.69
6490 15838 7.959175 TCAACATTGTGTACTAAGTACTCCTT 58.041 34.615 0.00 0.00 39.49 3.36
6491 15839 7.534723 TCAACATTGTGTACTAAGTACTCCT 57.465 36.000 0.00 0.00 39.49 3.69
6492 15840 6.310711 GCTCAACATTGTGTACTAAGTACTCC 59.689 42.308 0.00 0.00 39.49 3.85
6493 15841 6.866770 TGCTCAACATTGTGTACTAAGTACTC 59.133 38.462 0.00 0.00 39.49 2.59
6494 15842 6.755206 TGCTCAACATTGTGTACTAAGTACT 58.245 36.000 0.00 0.00 39.49 2.73
6495 15843 6.645415 ACTGCTCAACATTGTGTACTAAGTAC 59.355 38.462 0.00 0.00 39.24 2.73
6496 15844 6.755206 ACTGCTCAACATTGTGTACTAAGTA 58.245 36.000 0.00 0.00 0.00 2.24
6497 15845 5.611374 ACTGCTCAACATTGTGTACTAAGT 58.389 37.500 0.00 0.00 0.00 2.24
6498 15846 6.545504 AACTGCTCAACATTGTGTACTAAG 57.454 37.500 0.00 0.00 0.00 2.18
6499 15847 6.540551 TGAAACTGCTCAACATTGTGTACTAA 59.459 34.615 0.00 0.00 0.00 2.24
6500 15848 6.052360 TGAAACTGCTCAACATTGTGTACTA 58.948 36.000 0.00 0.00 0.00 1.82
6501 15849 4.881273 TGAAACTGCTCAACATTGTGTACT 59.119 37.500 0.00 0.00 0.00 2.73
6502 15850 5.007626 TCTGAAACTGCTCAACATTGTGTAC 59.992 40.000 0.00 0.00 0.00 2.90
6503 15851 5.122519 TCTGAAACTGCTCAACATTGTGTA 58.877 37.500 0.00 0.00 0.00 2.90
6504 15852 3.947196 TCTGAAACTGCTCAACATTGTGT 59.053 39.130 0.00 0.00 0.00 3.72
6505 15853 4.534168 CTCTGAAACTGCTCAACATTGTG 58.466 43.478 0.00 0.00 0.00 3.33
6506 15854 3.004106 GCTCTGAAACTGCTCAACATTGT 59.996 43.478 0.00 0.00 0.00 2.71
6507 15855 3.252701 AGCTCTGAAACTGCTCAACATTG 59.747 43.478 0.00 0.00 30.41 2.82
6508 15856 3.484407 AGCTCTGAAACTGCTCAACATT 58.516 40.909 0.00 0.00 30.41 2.71
6509 15857 3.137446 AGCTCTGAAACTGCTCAACAT 57.863 42.857 0.00 0.00 30.41 2.71
6510 15858 2.627515 AGCTCTGAAACTGCTCAACA 57.372 45.000 0.00 0.00 30.41 3.33
6511 15859 3.313526 TGAAAGCTCTGAAACTGCTCAAC 59.686 43.478 0.00 0.00 35.85 3.18
6512 15860 3.313526 GTGAAAGCTCTGAAACTGCTCAA 59.686 43.478 0.00 0.00 35.85 3.02
6513 15861 2.874701 GTGAAAGCTCTGAAACTGCTCA 59.125 45.455 0.00 0.00 35.85 4.26
6514 15862 3.137533 AGTGAAAGCTCTGAAACTGCTC 58.862 45.455 0.00 0.00 35.85 4.26
6515 15863 3.137533 GAGTGAAAGCTCTGAAACTGCT 58.862 45.455 0.00 0.00 38.87 4.24
6516 15864 2.874701 TGAGTGAAAGCTCTGAAACTGC 59.125 45.455 0.00 0.00 36.51 4.40
6517 15865 3.249559 GGTGAGTGAAAGCTCTGAAACTG 59.750 47.826 0.00 0.00 36.51 3.16
6518 15866 3.471680 GGTGAGTGAAAGCTCTGAAACT 58.528 45.455 0.00 0.00 36.51 2.66
6519 15867 2.550180 GGGTGAGTGAAAGCTCTGAAAC 59.450 50.000 0.00 0.00 36.51 2.78
6520 15868 2.806745 CGGGTGAGTGAAAGCTCTGAAA 60.807 50.000 0.00 0.00 36.51 2.69
6521 15869 1.270305 CGGGTGAGTGAAAGCTCTGAA 60.270 52.381 0.00 0.00 36.51 3.02
6522 15870 0.318441 CGGGTGAGTGAAAGCTCTGA 59.682 55.000 0.00 0.00 36.51 3.27
6523 15871 0.671781 CCGGGTGAGTGAAAGCTCTG 60.672 60.000 0.00 0.00 36.51 3.35
6524 15872 1.122019 ACCGGGTGAGTGAAAGCTCT 61.122 55.000 6.32 0.00 36.51 4.09
6525 15873 0.250338 AACCGGGTGAGTGAAAGCTC 60.250 55.000 6.32 0.00 36.12 4.09
6526 15874 0.250338 GAACCGGGTGAGTGAAAGCT 60.250 55.000 6.32 0.00 0.00 3.74
6527 15875 0.250338 AGAACCGGGTGAGTGAAAGC 60.250 55.000 6.32 0.00 0.00 3.51
6528 15876 2.143925 GAAGAACCGGGTGAGTGAAAG 58.856 52.381 6.32 0.00 0.00 2.62
6529 15877 1.766496 AGAAGAACCGGGTGAGTGAAA 59.234 47.619 6.32 0.00 0.00 2.69
6530 15878 1.070134 CAGAAGAACCGGGTGAGTGAA 59.930 52.381 6.32 0.00 0.00 3.18
6531 15879 0.679505 CAGAAGAACCGGGTGAGTGA 59.320 55.000 6.32 0.00 0.00 3.41
6532 15880 0.320771 CCAGAAGAACCGGGTGAGTG 60.321 60.000 6.32 0.00 0.00 3.51
6533 15881 0.763223 ACCAGAAGAACCGGGTGAGT 60.763 55.000 6.32 0.00 31.04 3.41
6534 15882 0.396811 AACCAGAAGAACCGGGTGAG 59.603 55.000 6.32 0.00 33.00 3.51
6535 15883 0.841289 AAACCAGAAGAACCGGGTGA 59.159 50.000 6.32 0.00 33.00 4.02
6536 15884 0.951558 CAAACCAGAAGAACCGGGTG 59.048 55.000 6.32 0.00 33.00 4.61
6537 15885 0.822121 GCAAACCAGAAGAACCGGGT 60.822 55.000 6.32 0.00 34.43 5.28
6538 15886 0.537371 AGCAAACCAGAAGAACCGGG 60.537 55.000 6.32 0.00 0.00 5.73
6539 15887 1.001378 CAAGCAAACCAGAAGAACCGG 60.001 52.381 0.00 0.00 0.00 5.28
6540 15888 1.676006 ACAAGCAAACCAGAAGAACCG 59.324 47.619 0.00 0.00 0.00 4.44
6541 15889 3.883489 ACTACAAGCAAACCAGAAGAACC 59.117 43.478 0.00 0.00 0.00 3.62
6542 15890 6.426937 TCATACTACAAGCAAACCAGAAGAAC 59.573 38.462 0.00 0.00 0.00 3.01
6543 15891 6.530120 TCATACTACAAGCAAACCAGAAGAA 58.470 36.000 0.00 0.00 0.00 2.52
6544 15892 6.014584 TCTCATACTACAAGCAAACCAGAAGA 60.015 38.462 0.00 0.00 0.00 2.87
6545 15893 6.166279 TCTCATACTACAAGCAAACCAGAAG 58.834 40.000 0.00 0.00 0.00 2.85
6546 15894 6.109156 TCTCATACTACAAGCAAACCAGAA 57.891 37.500 0.00 0.00 0.00 3.02
6547 15895 5.738619 TCTCATACTACAAGCAAACCAGA 57.261 39.130 0.00 0.00 0.00 3.86
6548 15896 6.820656 AGATTCTCATACTACAAGCAAACCAG 59.179 38.462 0.00 0.00 0.00 4.00
6549 15897 6.711277 AGATTCTCATACTACAAGCAAACCA 58.289 36.000 0.00 0.00 0.00 3.67
6550 15898 6.818644 TGAGATTCTCATACTACAAGCAAACC 59.181 38.462 12.38 0.00 35.39 3.27
6551 15899 7.834068 TGAGATTCTCATACTACAAGCAAAC 57.166 36.000 12.38 0.00 35.39 2.93
6569 15917 6.481976 TCAAACGTAGACACACAAATGAGATT 59.518 34.615 0.00 0.00 0.00 2.40
6571 15919 5.353111 TCAAACGTAGACACACAAATGAGA 58.647 37.500 0.00 0.00 0.00 3.27
6600 15948 5.406163 ACCAATGAGATTCCCCTTCTTTTT 58.594 37.500 0.00 0.00 0.00 1.94
6601 15949 5.015813 ACCAATGAGATTCCCCTTCTTTT 57.984 39.130 0.00 0.00 0.00 2.27
6603 15951 4.347607 CAACCAATGAGATTCCCCTTCTT 58.652 43.478 0.00 0.00 0.00 2.52
6604 15952 3.309410 CCAACCAATGAGATTCCCCTTCT 60.309 47.826 0.00 0.00 0.00 2.85
6605 15953 3.026694 CCAACCAATGAGATTCCCCTTC 58.973 50.000 0.00 0.00 0.00 3.46
6606 15954 2.383338 ACCAACCAATGAGATTCCCCTT 59.617 45.455 0.00 0.00 0.00 3.95
6608 15956 2.532250 ACCAACCAATGAGATTCCCC 57.468 50.000 0.00 0.00 0.00 4.81
6609 15957 3.430453 TGAACCAACCAATGAGATTCCC 58.570 45.455 0.00 0.00 0.00 3.97
6610 15958 4.098501 GGATGAACCAACCAATGAGATTCC 59.901 45.833 0.00 0.00 38.79 3.01
6611 15959 4.952335 AGGATGAACCAACCAATGAGATTC 59.048 41.667 0.00 0.00 42.04 2.52
6613 15961 4.018141 TCAGGATGAACCAACCAATGAGAT 60.018 41.667 0.00 0.00 45.97 2.75
6614 15962 3.330405 TCAGGATGAACCAACCAATGAGA 59.670 43.478 0.00 0.00 45.97 3.27
6615 15963 3.689347 TCAGGATGAACCAACCAATGAG 58.311 45.455 0.00 0.00 45.97 2.90
6616 15964 3.805066 TCAGGATGAACCAACCAATGA 57.195 42.857 0.00 0.00 45.97 2.57
6629 15977 4.063689 GCTATCCTTCACACATCAGGATG 58.936 47.826 9.75 7.70 45.45 3.51
6631 15979 2.435805 GGCTATCCTTCACACATCAGGA 59.564 50.000 0.00 0.00 41.08 3.86
6632 15980 2.171237 TGGCTATCCTTCACACATCAGG 59.829 50.000 0.00 0.00 0.00 3.86
6633 15981 3.548745 TGGCTATCCTTCACACATCAG 57.451 47.619 0.00 0.00 0.00 2.90
6634 15982 3.998913 TTGGCTATCCTTCACACATCA 57.001 42.857 0.00 0.00 0.00 3.07
6635 15983 6.712095 TGATTATTGGCTATCCTTCACACATC 59.288 38.462 0.00 0.00 0.00 3.06
6636 15984 6.604171 TGATTATTGGCTATCCTTCACACAT 58.396 36.000 0.00 0.00 0.00 3.21
6655 16026 4.588899 CCACACCAATCTGGACTTGATTA 58.411 43.478 0.00 0.00 40.96 1.75
6658 16029 1.545428 GCCACACCAATCTGGACTTGA 60.545 52.381 0.00 0.00 40.96 3.02
6662 16033 2.257353 GTGCCACACCAATCTGGAC 58.743 57.895 0.00 0.00 40.96 4.02
6663 16034 4.819783 GTGCCACACCAATCTGGA 57.180 55.556 0.00 0.00 40.96 3.86
6690 16061 3.612860 CAGGTTGTGAACTGTATACGCTC 59.387 47.826 0.00 0.00 0.00 5.03


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.