Multiple sequence alignment - TraesCS4D01G097600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G097600 chr4D 100.000 2828 0 0 1 2828 74354184 74351357 0.000000e+00 5223.0
1 TraesCS4D01G097600 chr4A 92.970 2020 101 20 1 1999 513340544 513342543 0.000000e+00 2905.0
2 TraesCS4D01G097600 chr4B 92.730 1747 94 17 267 1999 106821744 106820017 0.000000e+00 2492.0
3 TraesCS4D01G097600 chr4B 88.612 281 20 3 1 278 106822206 106821935 5.840000e-87 331.0
4 TraesCS4D01G097600 chr4B 84.375 192 27 2 2354 2542 106819534 106819343 4.810000e-43 185.0
5 TraesCS4D01G097600 chr4B 87.692 65 8 0 2001 2065 106819769 106819705 3.020000e-10 76.8
6 TraesCS4D01G097600 chr1B 93.103 58 2 2 854 910 632121758 632121814 1.810000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G097600 chr4D 74351357 74354184 2827 True 5223.0 5223 100.00000 1 2828 1 chr4D.!!$R1 2827
1 TraesCS4D01G097600 chr4A 513340544 513342543 1999 False 2905.0 2905 92.97000 1 1999 1 chr4A.!!$F1 1998
2 TraesCS4D01G097600 chr4B 106819343 106822206 2863 True 771.2 2492 88.35225 1 2542 4 chr4B.!!$R1 2541

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
483 704 0.237235 GCGACATCAACAAAAGGCGA 59.763 50.0 0.0 0.0 0.0 5.54 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1940 2179 0.027455 CGCACAAACAAGAGCACGAA 59.973 50.0 0.0 0.0 0.0 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
64 65 3.503363 TGACAAATTGCTGGACTCATGAC 59.497 43.478 0.00 0.00 0.00 3.06
86 87 6.094464 TGACATCTTGATGTTTCATTGGCTAG 59.906 38.462 16.15 0.00 34.45 3.42
211 216 0.528684 GGCAGCAGCGAGTTACTAGG 60.529 60.000 0.00 0.00 43.41 3.02
290 500 6.992715 AGTATCCACTATTGGCAATCACTTAC 59.007 38.462 17.41 11.69 43.56 2.34
331 544 3.004734 ACACAGCTTCAGCATTTGTAACC 59.995 43.478 0.75 0.00 45.16 2.85
338 551 5.163754 GCTTCAGCATTTGTAACCTTCGTAT 60.164 40.000 0.00 0.00 41.59 3.06
351 564 2.037641 CCTTCGTATGATCAGGGATGCA 59.962 50.000 0.09 0.00 0.00 3.96
353 566 3.836365 TCGTATGATCAGGGATGCAAA 57.164 42.857 0.09 0.00 0.00 3.68
354 567 3.466836 TCGTATGATCAGGGATGCAAAC 58.533 45.455 0.09 0.00 0.00 2.93
380 593 5.028549 AGCGTCACTCATCTATTGGAAAT 57.971 39.130 0.00 0.00 0.00 2.17
383 596 5.294306 GCGTCACTCATCTATTGGAAATGAA 59.706 40.000 0.00 0.00 0.00 2.57
384 597 6.510799 GCGTCACTCATCTATTGGAAATGAAG 60.511 42.308 0.00 0.00 0.00 3.02
385 598 6.536582 CGTCACTCATCTATTGGAAATGAAGT 59.463 38.462 0.00 0.00 0.00 3.01
386 599 7.254252 CGTCACTCATCTATTGGAAATGAAGTC 60.254 40.741 0.00 0.00 0.00 3.01
387 600 7.768120 GTCACTCATCTATTGGAAATGAAGTCT 59.232 37.037 0.00 0.00 0.00 3.24
390 603 7.930865 ACTCATCTATTGGAAATGAAGTCTAGC 59.069 37.037 0.00 0.00 0.00 3.42
391 604 8.027524 TCATCTATTGGAAATGAAGTCTAGCT 57.972 34.615 0.00 0.00 0.00 3.32
395 616 3.338249 TGGAAATGAAGTCTAGCTGCAC 58.662 45.455 1.02 0.00 35.09 4.57
459 680 5.353394 TCCATTCCGTTATTACTTCAGCT 57.647 39.130 0.00 0.00 0.00 4.24
483 704 0.237235 GCGACATCAACAAAAGGCGA 59.763 50.000 0.00 0.00 0.00 5.54
510 731 1.173043 CCGTTGGTGGCATGTAACAT 58.827 50.000 0.00 0.00 0.00 2.71
513 734 2.985809 CGTTGGTGGCATGTAACATTTG 59.014 45.455 0.00 0.00 0.00 2.32
514 735 2.736192 GTTGGTGGCATGTAACATTTGC 59.264 45.455 0.00 0.00 35.64 3.68
537 758 3.568430 TGCCATCTCAATCAGAATCATGC 59.432 43.478 0.00 0.00 33.62 4.06
599 820 2.895404 ACTGCATGCCTCAACTGAAAAT 59.105 40.909 16.68 0.00 0.00 1.82
647 868 4.005650 TCTCATGACACCAGAATTTCTGC 58.994 43.478 19.04 7.64 42.98 4.26
651 872 4.890158 TGACACCAGAATTTCTGCTCTA 57.110 40.909 19.04 3.42 42.98 2.43
654 875 5.645067 TGACACCAGAATTTCTGCTCTATTG 59.355 40.000 19.04 11.06 42.98 1.90
655 876 5.809001 ACACCAGAATTTCTGCTCTATTGA 58.191 37.500 19.04 0.00 42.98 2.57
661 882 7.714377 CCAGAATTTCTGCTCTATTGAGTATGT 59.286 37.037 19.04 0.00 42.98 2.29
725 946 1.227883 CAGATAGCCAGCCAGCCAG 60.228 63.158 0.00 0.00 0.00 4.85
726 947 2.594013 GATAGCCAGCCAGCCAGC 60.594 66.667 0.00 0.00 0.00 4.85
727 948 4.201122 ATAGCCAGCCAGCCAGCC 62.201 66.667 0.00 0.00 0.00 4.85
744 965 0.250901 GCCAAGAGTGCCCAGAAAGA 60.251 55.000 0.00 0.00 0.00 2.52
922 1143 1.408702 GTGGAAGCAAAGAAACCAGCA 59.591 47.619 0.00 0.00 0.00 4.41
942 1163 3.306641 GCAGCCTCTCACCTCCATATAAG 60.307 52.174 0.00 0.00 0.00 1.73
986 1208 0.911045 TGCAGCCCAGATCCTTGAGA 60.911 55.000 0.00 0.00 0.00 3.27
1114 1336 1.429463 GAGCAACTCCAGGTACAACG 58.571 55.000 0.00 0.00 0.00 4.10
1118 1340 0.470766 AACTCCAGGTACAACGGCAA 59.529 50.000 0.00 0.00 0.00 4.52
1160 1382 1.111116 CATGCCAATGCCACCCCTAG 61.111 60.000 0.00 0.00 36.33 3.02
1161 1383 1.583784 ATGCCAATGCCACCCCTAGT 61.584 55.000 0.00 0.00 36.33 2.57
1269 1491 1.655484 CAATGACAGCTATCGTGCCA 58.345 50.000 0.00 0.00 0.00 4.92
1356 1578 0.181587 TTGGTTGCCAAGACGAGGAA 59.818 50.000 0.00 0.00 38.75 3.36
1912 2151 3.427863 GCATGTGCTTTCTTTCTCTTTGC 59.572 43.478 0.00 0.00 38.21 3.68
2003 2489 8.948631 ACTGATGAATGTTTGTACCTATAGTG 57.051 34.615 0.00 0.00 0.00 2.74
2015 2501 9.577110 TTTGTACCTATAGTGTGTTTTAGATCG 57.423 33.333 0.00 0.00 0.00 3.69
2020 2506 7.122353 ACCTATAGTGTGTTTTAGATCGTGACT 59.878 37.037 0.00 0.00 0.00 3.41
2024 2510 5.815740 AGTGTGTTTTAGATCGTGACTGTTT 59.184 36.000 0.00 0.00 0.00 2.83
2055 2541 4.402793 TGGCTAGCTGTTTTAGAGTAGAGG 59.597 45.833 15.72 0.00 0.00 3.69
2057 2543 5.344884 GCTAGCTGTTTTAGAGTAGAGGTG 58.655 45.833 7.70 0.00 0.00 4.00
2065 2551 2.803030 AGAGTAGAGGTGTTCGGCTA 57.197 50.000 0.00 0.00 0.00 3.93
2066 2552 2.367486 AGAGTAGAGGTGTTCGGCTAC 58.633 52.381 0.00 0.00 34.81 3.58
2070 2556 4.533318 AGGTGTTCGGCTACCTCA 57.467 55.556 0.00 0.00 43.69 3.86
2071 2557 1.972978 AGGTGTTCGGCTACCTCAC 59.027 57.895 0.00 0.00 43.69 3.51
2072 2558 0.542232 AGGTGTTCGGCTACCTCACT 60.542 55.000 0.00 0.00 43.69 3.41
2073 2559 0.320697 GGTGTTCGGCTACCTCACTT 59.679 55.000 0.00 0.00 34.11 3.16
2074 2560 1.672145 GGTGTTCGGCTACCTCACTTC 60.672 57.143 0.00 0.00 34.11 3.01
2075 2561 1.272769 GTGTTCGGCTACCTCACTTCT 59.727 52.381 0.00 0.00 0.00 2.85
2076 2562 1.272490 TGTTCGGCTACCTCACTTCTG 59.728 52.381 0.00 0.00 0.00 3.02
2077 2563 1.272769 GTTCGGCTACCTCACTTCTGT 59.727 52.381 0.00 0.00 0.00 3.41
2078 2564 1.629043 TCGGCTACCTCACTTCTGTT 58.371 50.000 0.00 0.00 0.00 3.16
2079 2565 1.968493 TCGGCTACCTCACTTCTGTTT 59.032 47.619 0.00 0.00 0.00 2.83
2080 2566 2.367567 TCGGCTACCTCACTTCTGTTTT 59.632 45.455 0.00 0.00 0.00 2.43
2081 2567 3.575256 TCGGCTACCTCACTTCTGTTTTA 59.425 43.478 0.00 0.00 0.00 1.52
2082 2568 4.039488 TCGGCTACCTCACTTCTGTTTTAA 59.961 41.667 0.00 0.00 0.00 1.52
2083 2569 4.753107 CGGCTACCTCACTTCTGTTTTAAA 59.247 41.667 0.00 0.00 0.00 1.52
2084 2570 5.107065 CGGCTACCTCACTTCTGTTTTAAAG 60.107 44.000 0.00 0.00 0.00 1.85
2085 2571 5.763698 GGCTACCTCACTTCTGTTTTAAAGT 59.236 40.000 0.00 0.00 36.16 2.66
2086 2572 6.932960 GGCTACCTCACTTCTGTTTTAAAGTA 59.067 38.462 0.00 0.00 34.05 2.24
2087 2573 7.117956 GGCTACCTCACTTCTGTTTTAAAGTAG 59.882 40.741 0.00 0.00 34.05 2.57
2088 2574 7.871463 GCTACCTCACTTCTGTTTTAAAGTAGA 59.129 37.037 0.00 4.08 34.05 2.59
2089 2575 9.413048 CTACCTCACTTCTGTTTTAAAGTAGAG 57.587 37.037 0.00 0.00 34.05 2.43
2090 2576 7.793036 ACCTCACTTCTGTTTTAAAGTAGAGT 58.207 34.615 0.00 3.51 34.05 3.24
2091 2577 8.265764 ACCTCACTTCTGTTTTAAAGTAGAGTT 58.734 33.333 0.00 0.00 34.05 3.01
2092 2578 8.552034 CCTCACTTCTGTTTTAAAGTAGAGTTG 58.448 37.037 0.00 5.89 34.05 3.16
2093 2579 9.099454 CTCACTTCTGTTTTAAAGTAGAGTTGT 57.901 33.333 4.38 3.64 34.05 3.32
2094 2580 9.444600 TCACTTCTGTTTTAAAGTAGAGTTGTT 57.555 29.630 4.38 0.00 34.05 2.83
2095 2581 9.704098 CACTTCTGTTTTAAAGTAGAGTTGTTC 57.296 33.333 4.38 0.00 34.05 3.18
2096 2582 8.601476 ACTTCTGTTTTAAAGTAGAGTTGTTCG 58.399 33.333 4.38 0.00 34.05 3.95
2097 2583 7.473027 TCTGTTTTAAAGTAGAGTTGTTCGG 57.527 36.000 0.80 0.00 0.00 4.30
2098 2584 6.018507 TCTGTTTTAAAGTAGAGTTGTTCGGC 60.019 38.462 0.80 0.00 0.00 5.54
2099 2585 5.818857 TGTTTTAAAGTAGAGTTGTTCGGCT 59.181 36.000 0.00 0.00 0.00 5.52
2100 2586 6.985645 TGTTTTAAAGTAGAGTTGTTCGGCTA 59.014 34.615 0.00 0.00 0.00 3.93
2101 2587 7.042523 TGTTTTAAAGTAGAGTTGTTCGGCTAC 60.043 37.037 0.00 0.00 34.81 3.58
2102 2588 3.589495 AAGTAGAGTTGTTCGGCTACC 57.411 47.619 0.00 0.00 35.08 3.18
2103 2589 2.522185 AGTAGAGTTGTTCGGCTACCA 58.478 47.619 0.00 0.00 35.08 3.25
2104 2590 2.230750 AGTAGAGTTGTTCGGCTACCAC 59.769 50.000 0.00 0.00 35.08 4.16
2105 2591 1.045407 AGAGTTGTTCGGCTACCACA 58.955 50.000 0.00 0.00 0.00 4.17
2106 2592 1.145803 GAGTTGTTCGGCTACCACAC 58.854 55.000 0.00 0.00 0.00 3.82
2107 2593 0.756903 AGTTGTTCGGCTACCACACT 59.243 50.000 0.00 0.00 0.00 3.55
2108 2594 1.140252 AGTTGTTCGGCTACCACACTT 59.860 47.619 0.00 0.00 0.00 3.16
2109 2595 1.529865 GTTGTTCGGCTACCACACTTC 59.470 52.381 0.00 0.00 0.00 3.01
2110 2596 1.045407 TGTTCGGCTACCACACTTCT 58.955 50.000 0.00 0.00 0.00 2.85
2111 2597 1.414919 TGTTCGGCTACCACACTTCTT 59.585 47.619 0.00 0.00 0.00 2.52
2112 2598 2.158871 TGTTCGGCTACCACACTTCTTT 60.159 45.455 0.00 0.00 0.00 2.52
2113 2599 2.876550 GTTCGGCTACCACACTTCTTTT 59.123 45.455 0.00 0.00 0.00 2.27
2114 2600 2.489971 TCGGCTACCACACTTCTTTTG 58.510 47.619 0.00 0.00 0.00 2.44
2115 2601 2.103432 TCGGCTACCACACTTCTTTTGA 59.897 45.455 0.00 0.00 0.00 2.69
2116 2602 2.480419 CGGCTACCACACTTCTTTTGAG 59.520 50.000 0.00 0.00 0.00 3.02
2126 2612 0.030101 TTCTTTTGAGCCGTTTGCCG 59.970 50.000 0.00 0.00 42.71 5.69
2129 2615 2.945398 TTTTGAGCCGTTTGCCGTGC 62.945 55.000 0.00 0.00 42.71 5.34
2138 2624 3.765026 CCGTTTGCCGTGCTTTATAAAT 58.235 40.909 0.00 0.00 33.66 1.40
2140 2626 5.333513 CCGTTTGCCGTGCTTTATAAATAA 58.666 37.500 0.00 0.00 33.66 1.40
2142 2628 6.020995 CCGTTTGCCGTGCTTTATAAATAAAG 60.021 38.462 15.20 15.20 42.18 1.85
2143 2629 6.525280 CGTTTGCCGTGCTTTATAAATAAAGT 59.475 34.615 18.85 0.00 46.78 2.66
2144 2630 7.253190 CGTTTGCCGTGCTTTATAAATAAAGTC 60.253 37.037 18.85 13.39 46.78 3.01
2145 2631 6.745159 TGCCGTGCTTTATAAATAAAGTCA 57.255 33.333 18.85 15.11 46.78 3.41
2146 2632 7.328277 TGCCGTGCTTTATAAATAAAGTCAT 57.672 32.000 18.85 0.00 46.78 3.06
2147 2633 7.192913 TGCCGTGCTTTATAAATAAAGTCATG 58.807 34.615 18.85 19.08 46.78 3.07
2150 2636 8.394877 CCGTGCTTTATAAATAAAGTCATGTGA 58.605 33.333 18.85 0.00 46.78 3.58
2151 2637 9.210426 CGTGCTTTATAAATAAAGTCATGTGAC 57.790 33.333 18.85 5.01 46.78 3.67
2152 2638 9.503427 GTGCTTTATAAATAAAGTCATGTGACC 57.497 33.333 18.85 4.92 46.78 4.02
2162 2648 8.806429 ATAAAGTCATGTGACCAAATGATACA 57.194 30.769 9.41 0.00 45.85 2.29
2163 2649 7.707624 AAAGTCATGTGACCAAATGATACAT 57.292 32.000 9.41 0.00 45.85 2.29
2164 2650 8.806429 AAAGTCATGTGACCAAATGATACATA 57.194 30.769 9.41 0.00 45.85 2.29
2165 2651 8.985315 AAGTCATGTGACCAAATGATACATAT 57.015 30.769 9.41 0.00 45.85 1.78
2166 2652 8.985315 AGTCATGTGACCAAATGATACATATT 57.015 30.769 9.41 0.00 45.85 1.28
2167 2653 8.843262 AGTCATGTGACCAAATGATACATATTG 58.157 33.333 9.41 0.00 45.85 1.90
2168 2654 8.623903 GTCATGTGACCAAATGATACATATTGT 58.376 33.333 6.19 0.00 39.07 2.71
2169 2655 9.187996 TCATGTGACCAAATGATACATATTGTT 57.812 29.630 0.00 0.00 31.34 2.83
2197 2683 7.687941 AAAAACCTCATACAAGTTGATCGAT 57.312 32.000 10.54 0.00 0.00 3.59
2198 2684 8.786826 AAAAACCTCATACAAGTTGATCGATA 57.213 30.769 10.54 0.00 0.00 2.92
2199 2685 8.786826 AAAACCTCATACAAGTTGATCGATAA 57.213 30.769 10.54 0.00 0.00 1.75
2200 2686 8.786826 AAACCTCATACAAGTTGATCGATAAA 57.213 30.769 10.54 0.00 0.00 1.40
2201 2687 8.786826 AACCTCATACAAGTTGATCGATAAAA 57.213 30.769 10.54 0.00 0.00 1.52
2202 2688 8.786826 ACCTCATACAAGTTGATCGATAAAAA 57.213 30.769 10.54 0.00 0.00 1.94
2203 2689 8.883731 ACCTCATACAAGTTGATCGATAAAAAG 58.116 33.333 10.54 0.00 0.00 2.27
2210 2696 6.390987 AGTTGATCGATAAAAAGACGACAC 57.609 37.500 0.00 0.00 38.79 3.67
2224 2710 3.555956 AGACGACACAACAAATCAGACAC 59.444 43.478 0.00 0.00 0.00 3.67
2253 2739 1.925229 CACAAAAGTGCACAACCAGG 58.075 50.000 21.04 5.68 0.00 4.45
2256 2742 0.746659 AAAAGTGCACAACCAGGCTC 59.253 50.000 21.04 0.00 0.00 4.70
2258 2744 1.999634 AAGTGCACAACCAGGCTCCT 62.000 55.000 21.04 0.00 0.00 3.69
2260 2746 2.360475 GCACAACCAGGCTCCTCC 60.360 66.667 0.00 0.00 0.00 4.30
2261 2747 3.160585 CACAACCAGGCTCCTCCA 58.839 61.111 0.00 0.00 37.29 3.86
2262 2748 1.002868 CACAACCAGGCTCCTCCAG 60.003 63.158 0.00 0.00 37.29 3.86
2274 2760 2.562635 CTCCTCCAGCATGTCATCAAG 58.437 52.381 0.00 0.00 0.00 3.02
2301 2787 6.798315 AAGCACATGATATAAGAGATGCAC 57.202 37.500 0.00 0.00 34.27 4.57
2302 2788 5.861727 AGCACATGATATAAGAGATGCACA 58.138 37.500 0.00 0.00 34.27 4.57
2303 2789 5.699915 AGCACATGATATAAGAGATGCACAC 59.300 40.000 0.00 0.00 34.27 3.82
2305 2791 6.565435 GCACATGATATAAGAGATGCACACAC 60.565 42.308 0.00 0.00 0.00 3.82
2306 2792 6.480981 CACATGATATAAGAGATGCACACACA 59.519 38.462 0.00 0.00 0.00 3.72
2307 2793 7.172703 CACATGATATAAGAGATGCACACACAT 59.827 37.037 0.00 0.00 0.00 3.21
2308 2794 7.718314 ACATGATATAAGAGATGCACACACATT 59.282 33.333 0.00 0.00 0.00 2.71
2309 2795 7.719778 TGATATAAGAGATGCACACACATTC 57.280 36.000 0.00 0.00 0.00 2.67
2310 2796 7.274447 TGATATAAGAGATGCACACACATTCA 58.726 34.615 0.00 0.00 0.00 2.57
2311 2797 7.769970 TGATATAAGAGATGCACACACATTCAA 59.230 33.333 0.00 0.00 0.00 2.69
2312 2798 8.687292 ATATAAGAGATGCACACACATTCAAT 57.313 30.769 0.00 0.00 0.00 2.57
2313 2799 4.696899 AGAGATGCACACACATTCAATG 57.303 40.909 0.00 0.00 0.00 2.82
2314 2800 4.329392 AGAGATGCACACACATTCAATGA 58.671 39.130 3.79 0.00 0.00 2.57
2315 2801 4.155462 AGAGATGCACACACATTCAATGAC 59.845 41.667 3.79 0.00 0.00 3.06
2316 2802 3.822167 AGATGCACACACATTCAATGACA 59.178 39.130 3.79 0.00 0.00 3.58
2317 2803 4.278919 AGATGCACACACATTCAATGACAA 59.721 37.500 3.79 0.00 0.00 3.18
2318 2804 4.382345 TGCACACACATTCAATGACAAA 57.618 36.364 3.79 0.00 0.00 2.83
2319 2805 4.111198 TGCACACACATTCAATGACAAAC 58.889 39.130 3.79 0.00 0.00 2.93
2320 2806 3.490526 GCACACACATTCAATGACAAACC 59.509 43.478 3.79 0.00 0.00 3.27
2321 2807 4.050553 CACACACATTCAATGACAAACCC 58.949 43.478 3.79 0.00 0.00 4.11
2322 2808 3.069443 ACACACATTCAATGACAAACCCC 59.931 43.478 3.79 0.00 0.00 4.95
2323 2809 2.632512 ACACATTCAATGACAAACCCCC 59.367 45.455 3.79 0.00 0.00 5.40
2356 2847 4.270376 GGGAAATGATGCGCCGCC 62.270 66.667 6.63 0.00 0.00 6.13
2376 2867 2.582498 CGCGTCCGCCTTAAGAGG 60.582 66.667 3.36 7.31 46.50 3.69
2378 2869 1.442148 GCGTCCGCCTTAAGAGGAT 59.558 57.895 18.38 0.00 46.74 3.24
2379 2870 0.876342 GCGTCCGCCTTAAGAGGATG 60.876 60.000 23.60 23.60 46.74 3.51
2387 2878 4.282195 CCGCCTTAAGAGGATGAGAGTTAT 59.718 45.833 3.36 0.00 46.74 1.89
2391 2882 6.041523 GCCTTAAGAGGATGAGAGTTATCACT 59.958 42.308 3.36 0.00 46.74 3.41
2408 2899 2.615447 TCACTCTCACTGCTTGCAAAAG 59.385 45.455 0.00 3.82 0.00 2.27
2409 2900 1.952296 ACTCTCACTGCTTGCAAAAGG 59.048 47.619 12.18 2.97 0.00 3.11
2410 2901 2.224606 CTCTCACTGCTTGCAAAAGGA 58.775 47.619 12.18 6.73 0.00 3.36
2411 2902 2.818432 CTCTCACTGCTTGCAAAAGGAT 59.182 45.455 12.18 0.00 0.00 3.24
2418 2911 1.478105 GCTTGCAAAAGGATGGGTAGG 59.522 52.381 0.00 0.00 0.00 3.18
2430 2923 0.254747 TGGGTAGGGAAATCAAGGCG 59.745 55.000 0.00 0.00 0.00 5.52
2438 2931 0.608035 GAAATCAAGGCGACACCCCA 60.608 55.000 0.00 0.00 40.58 4.96
2440 2933 0.178975 AATCAAGGCGACACCCCAAA 60.179 50.000 0.00 0.00 40.58 3.28
2454 2948 0.750249 CCCAAAAGGGACACAACACC 59.250 55.000 0.00 0.00 40.01 4.16
2455 2949 0.383949 CCAAAAGGGACACAACACCG 59.616 55.000 0.00 0.00 40.01 4.94
2480 2974 1.818060 GCATTGTCACTATTGGCACCA 59.182 47.619 0.00 0.00 36.96 4.17
2485 2979 0.035534 TCACTATTGGCACCATGCGT 60.036 50.000 0.00 0.00 46.21 5.24
2520 3014 3.775654 CCTCCCGCACACCTCTCC 61.776 72.222 0.00 0.00 0.00 3.71
2521 3015 2.681778 CTCCCGCACACCTCTCCT 60.682 66.667 0.00 0.00 0.00 3.69
2526 3020 0.970937 CCGCACACCTCTCCTAAGGA 60.971 60.000 0.00 0.00 38.87 3.36
2532 3026 2.225908 ACACCTCTCCTAAGGAACCCAT 60.226 50.000 0.00 0.00 38.87 4.00
2542 3036 0.926293 AGGAACCCATACCACCATGG 59.074 55.000 11.19 11.19 44.44 3.66
2551 3045 4.440145 CCACCATGGTCCCCAAAG 57.560 61.111 16.53 1.17 36.95 2.77
2552 3046 1.305213 CCACCATGGTCCCCAAAGG 60.305 63.158 16.53 7.68 36.95 3.11
2566 3060 2.465813 CCAAAGGGGAATAACCATGCA 58.534 47.619 0.00 0.00 40.01 3.96
2567 3061 2.168313 CCAAAGGGGAATAACCATGCAC 59.832 50.000 0.00 0.00 40.01 4.57
2568 3062 2.159179 AAGGGGAATAACCATGCACC 57.841 50.000 0.00 0.00 41.20 5.01
2569 3063 1.308877 AGGGGAATAACCATGCACCT 58.691 50.000 0.00 0.00 41.20 4.00
2570 3064 1.645919 AGGGGAATAACCATGCACCTT 59.354 47.619 0.00 0.00 41.20 3.50
2571 3065 1.756538 GGGGAATAACCATGCACCTTG 59.243 52.381 0.00 0.00 41.20 3.61
2572 3066 1.136891 GGGAATAACCATGCACCTTGC 59.863 52.381 0.00 0.00 41.67 4.01
2573 3067 1.136891 GGAATAACCATGCACCTTGCC 59.863 52.381 0.00 0.00 39.72 4.52
2574 3068 1.824230 GAATAACCATGCACCTTGCCA 59.176 47.619 0.00 0.00 44.23 4.92
2575 3069 2.163810 ATAACCATGCACCTTGCCAT 57.836 45.000 0.00 0.00 44.23 4.40
2576 3070 1.935799 TAACCATGCACCTTGCCATT 58.064 45.000 0.00 0.00 44.23 3.16
2577 3071 0.609662 AACCATGCACCTTGCCATTC 59.390 50.000 0.00 0.00 44.23 2.67
2578 3072 0.542467 ACCATGCACCTTGCCATTCA 60.542 50.000 0.00 0.00 44.23 2.57
2579 3073 0.108520 CCATGCACCTTGCCATTCAC 60.109 55.000 0.00 0.00 44.23 3.18
2580 3074 0.604073 CATGCACCTTGCCATTCACA 59.396 50.000 0.00 0.00 44.23 3.58
2581 3075 1.206132 CATGCACCTTGCCATTCACAT 59.794 47.619 0.00 0.00 44.23 3.21
2582 3076 0.604073 TGCACCTTGCCATTCACATG 59.396 50.000 0.00 0.00 44.23 3.21
2583 3077 0.889994 GCACCTTGCCATTCACATGA 59.110 50.000 0.00 0.00 37.42 3.07
2584 3078 1.403249 GCACCTTGCCATTCACATGAC 60.403 52.381 0.00 0.00 37.42 3.06
2585 3079 1.203052 CACCTTGCCATTCACATGACC 59.797 52.381 0.00 0.00 31.07 4.02
2586 3080 1.203038 ACCTTGCCATTCACATGACCA 60.203 47.619 0.00 0.00 31.07 4.02
2587 3081 1.894466 CCTTGCCATTCACATGACCAA 59.106 47.619 0.00 0.00 31.07 3.67
2588 3082 2.299582 CCTTGCCATTCACATGACCAAA 59.700 45.455 0.00 0.00 31.07 3.28
2589 3083 3.581755 CTTGCCATTCACATGACCAAAG 58.418 45.455 0.00 0.00 31.07 2.77
2590 3084 1.273048 TGCCATTCACATGACCAAAGC 59.727 47.619 0.00 0.00 31.07 3.51
2591 3085 1.273048 GCCATTCACATGACCAAAGCA 59.727 47.619 0.00 0.00 31.07 3.91
2592 3086 2.927871 GCCATTCACATGACCAAAGCAC 60.928 50.000 0.00 0.00 31.07 4.40
2593 3087 2.587956 CATTCACATGACCAAAGCACG 58.412 47.619 0.00 0.00 31.07 5.34
2594 3088 0.310543 TTCACATGACCAAAGCACGC 59.689 50.000 0.00 0.00 0.00 5.34
2595 3089 0.817229 TCACATGACCAAAGCACGCA 60.817 50.000 0.00 0.00 0.00 5.24
2596 3090 0.030504 CACATGACCAAAGCACGCAA 59.969 50.000 0.00 0.00 0.00 4.85
2597 3091 0.743688 ACATGACCAAAGCACGCAAA 59.256 45.000 0.00 0.00 0.00 3.68
2598 3092 1.130955 CATGACCAAAGCACGCAAAC 58.869 50.000 0.00 0.00 0.00 2.93
2599 3093 0.743688 ATGACCAAAGCACGCAAACA 59.256 45.000 0.00 0.00 0.00 2.83
2600 3094 0.528017 TGACCAAAGCACGCAAACAA 59.472 45.000 0.00 0.00 0.00 2.83
2601 3095 0.920664 GACCAAAGCACGCAAACAAC 59.079 50.000 0.00 0.00 0.00 3.32
2602 3096 0.244994 ACCAAAGCACGCAAACAACA 59.755 45.000 0.00 0.00 0.00 3.33
2603 3097 0.644843 CCAAAGCACGCAAACAACAC 59.355 50.000 0.00 0.00 0.00 3.32
2604 3098 1.627879 CAAAGCACGCAAACAACACT 58.372 45.000 0.00 0.00 0.00 3.55
2605 3099 1.321148 CAAAGCACGCAAACAACACTG 59.679 47.619 0.00 0.00 0.00 3.66
2606 3100 0.801836 AAGCACGCAAACAACACTGC 60.802 50.000 0.00 0.00 35.14 4.40
2607 3101 1.226660 GCACGCAAACAACACTGCT 60.227 52.632 0.00 0.00 36.38 4.24
2608 3102 0.801836 GCACGCAAACAACACTGCTT 60.802 50.000 0.00 0.00 36.38 3.91
2609 3103 0.915904 CACGCAAACAACACTGCTTG 59.084 50.000 0.00 0.00 36.38 4.01
2610 3104 0.808125 ACGCAAACAACACTGCTTGA 59.192 45.000 0.00 0.00 36.38 3.02
2611 3105 1.405105 ACGCAAACAACACTGCTTGAT 59.595 42.857 0.00 0.00 36.38 2.57
2612 3106 1.782569 CGCAAACAACACTGCTTGATG 59.217 47.619 0.00 0.00 36.38 3.07
2613 3107 2.129607 GCAAACAACACTGCTTGATGG 58.870 47.619 2.22 0.00 31.44 3.51
2614 3108 2.223782 GCAAACAACACTGCTTGATGGA 60.224 45.455 2.22 0.00 31.44 3.41
2615 3109 3.635331 CAAACAACACTGCTTGATGGAG 58.365 45.455 2.22 0.00 40.20 3.86
2616 3110 2.936919 ACAACACTGCTTGATGGAGA 57.063 45.000 0.00 0.00 37.57 3.71
2617 3111 2.775890 ACAACACTGCTTGATGGAGAG 58.224 47.619 0.00 0.00 37.57 3.20
2618 3112 2.105477 ACAACACTGCTTGATGGAGAGT 59.895 45.455 0.00 0.00 39.29 3.24
2619 3113 2.740981 CAACACTGCTTGATGGAGAGTC 59.259 50.000 0.00 0.00 37.00 3.36
2620 3114 1.973515 ACACTGCTTGATGGAGAGTCA 59.026 47.619 0.00 0.00 33.25 3.41
2621 3115 2.369860 ACACTGCTTGATGGAGAGTCAA 59.630 45.455 0.00 0.00 33.25 3.18
2622 3116 3.181451 ACACTGCTTGATGGAGAGTCAAA 60.181 43.478 0.00 0.00 33.25 2.69
2623 3117 4.008330 CACTGCTTGATGGAGAGTCAAAT 58.992 43.478 0.00 0.00 37.57 2.32
2624 3118 4.008330 ACTGCTTGATGGAGAGTCAAATG 58.992 43.478 0.00 0.00 37.57 2.32
2625 3119 2.751259 TGCTTGATGGAGAGTCAAATGC 59.249 45.455 0.00 0.00 35.36 3.56
2626 3120 2.751259 GCTTGATGGAGAGTCAAATGCA 59.249 45.455 0.00 0.00 35.36 3.96
2627 3121 3.427233 GCTTGATGGAGAGTCAAATGCAC 60.427 47.826 0.00 0.00 35.36 4.57
2628 3122 3.421919 TGATGGAGAGTCAAATGCACA 57.578 42.857 0.00 0.00 0.00 4.57
2629 3123 3.340928 TGATGGAGAGTCAAATGCACAG 58.659 45.455 0.00 0.00 0.00 3.66
2630 3124 2.936919 TGGAGAGTCAAATGCACAGT 57.063 45.000 0.00 0.00 0.00 3.55
2631 3125 2.771089 TGGAGAGTCAAATGCACAGTC 58.229 47.619 0.00 0.00 0.00 3.51
2632 3126 2.104622 TGGAGAGTCAAATGCACAGTCA 59.895 45.455 0.00 0.00 0.00 3.41
2633 3127 2.740981 GGAGAGTCAAATGCACAGTCAG 59.259 50.000 0.00 0.00 0.00 3.51
2634 3128 3.397482 GAGAGTCAAATGCACAGTCAGT 58.603 45.455 0.00 0.00 0.00 3.41
2635 3129 3.397482 AGAGTCAAATGCACAGTCAGTC 58.603 45.455 0.00 0.00 0.00 3.51
2636 3130 3.133691 GAGTCAAATGCACAGTCAGTCA 58.866 45.455 0.00 0.00 0.00 3.41
2637 3131 2.874701 AGTCAAATGCACAGTCAGTCAC 59.125 45.455 0.00 0.00 0.00 3.67
2638 3132 2.031682 GTCAAATGCACAGTCAGTCACC 60.032 50.000 0.00 0.00 0.00 4.02
2639 3133 1.948834 CAAATGCACAGTCAGTCACCA 59.051 47.619 0.00 0.00 0.00 4.17
2640 3134 2.346766 AATGCACAGTCAGTCACCAA 57.653 45.000 0.00 0.00 0.00 3.67
2641 3135 1.888215 ATGCACAGTCAGTCACCAAG 58.112 50.000 0.00 0.00 0.00 3.61
2642 3136 0.179048 TGCACAGTCAGTCACCAAGG 60.179 55.000 0.00 0.00 0.00 3.61
2643 3137 0.886490 GCACAGTCAGTCACCAAGGG 60.886 60.000 0.00 0.00 0.00 3.95
2644 3138 0.469917 CACAGTCAGTCACCAAGGGT 59.530 55.000 0.00 0.00 35.62 4.34
2645 3139 0.759346 ACAGTCAGTCACCAAGGGTC 59.241 55.000 0.00 0.00 31.02 4.46
2646 3140 0.319900 CAGTCAGTCACCAAGGGTCG 60.320 60.000 0.00 0.00 31.02 4.79
2647 3141 1.668151 GTCAGTCACCAAGGGTCGC 60.668 63.158 0.00 0.00 31.02 5.19
2648 3142 1.837051 TCAGTCACCAAGGGTCGCT 60.837 57.895 0.00 0.00 31.02 4.93
2649 3143 1.669115 CAGTCACCAAGGGTCGCTG 60.669 63.158 0.00 0.00 31.02 5.18
2650 3144 3.050275 GTCACCAAGGGTCGCTGC 61.050 66.667 0.00 0.00 31.02 5.25
2651 3145 4.329545 TCACCAAGGGTCGCTGCC 62.330 66.667 0.00 0.00 31.02 4.85
2658 3152 4.195334 GGGTCGCTGCCCCATCAT 62.195 66.667 8.87 0.00 42.89 2.45
2659 3153 2.592861 GGTCGCTGCCCCATCATC 60.593 66.667 0.00 0.00 0.00 2.92
2660 3154 2.190313 GTCGCTGCCCCATCATCA 59.810 61.111 0.00 0.00 0.00 3.07
2661 3155 2.182842 GTCGCTGCCCCATCATCAC 61.183 63.158 0.00 0.00 0.00 3.06
2662 3156 2.124612 CGCTGCCCCATCATCACA 60.125 61.111 0.00 0.00 0.00 3.58
2663 3157 1.750018 CGCTGCCCCATCATCACAA 60.750 57.895 0.00 0.00 0.00 3.33
2664 3158 1.811860 GCTGCCCCATCATCACAAC 59.188 57.895 0.00 0.00 0.00 3.32
2665 3159 1.669999 GCTGCCCCATCATCACAACC 61.670 60.000 0.00 0.00 0.00 3.77
2666 3160 1.000233 TGCCCCATCATCACAACCC 60.000 57.895 0.00 0.00 0.00 4.11
2667 3161 1.307647 GCCCCATCATCACAACCCT 59.692 57.895 0.00 0.00 0.00 4.34
2668 3162 0.550914 GCCCCATCATCACAACCCTA 59.449 55.000 0.00 0.00 0.00 3.53
2669 3163 1.064017 GCCCCATCATCACAACCCTAA 60.064 52.381 0.00 0.00 0.00 2.69
2670 3164 2.424812 GCCCCATCATCACAACCCTAAT 60.425 50.000 0.00 0.00 0.00 1.73
2671 3165 3.490348 CCCCATCATCACAACCCTAATC 58.510 50.000 0.00 0.00 0.00 1.75
2672 3166 3.490348 CCCATCATCACAACCCTAATCC 58.510 50.000 0.00 0.00 0.00 3.01
2673 3167 3.139025 CCCATCATCACAACCCTAATCCT 59.861 47.826 0.00 0.00 0.00 3.24
2674 3168 4.139786 CCATCATCACAACCCTAATCCTG 58.860 47.826 0.00 0.00 0.00 3.86
2675 3169 4.141413 CCATCATCACAACCCTAATCCTGA 60.141 45.833 0.00 0.00 0.00 3.86
2676 3170 5.439721 CATCATCACAACCCTAATCCTGAA 58.560 41.667 0.00 0.00 0.00 3.02
2677 3171 4.843728 TCATCACAACCCTAATCCTGAAC 58.156 43.478 0.00 0.00 0.00 3.18
2678 3172 3.713826 TCACAACCCTAATCCTGAACC 57.286 47.619 0.00 0.00 0.00 3.62
2679 3173 2.307686 TCACAACCCTAATCCTGAACCC 59.692 50.000 0.00 0.00 0.00 4.11
2680 3174 1.639108 ACAACCCTAATCCTGAACCCC 59.361 52.381 0.00 0.00 0.00 4.95
2681 3175 1.063942 CAACCCTAATCCTGAACCCCC 60.064 57.143 0.00 0.00 0.00 5.40
2682 3176 0.986550 ACCCTAATCCTGAACCCCCG 60.987 60.000 0.00 0.00 0.00 5.73
2683 3177 0.693092 CCCTAATCCTGAACCCCCGA 60.693 60.000 0.00 0.00 0.00 5.14
2684 3178 0.759346 CCTAATCCTGAACCCCCGAG 59.241 60.000 0.00 0.00 0.00 4.63
2685 3179 0.106894 CTAATCCTGAACCCCCGAGC 59.893 60.000 0.00 0.00 0.00 5.03
2686 3180 1.342672 TAATCCTGAACCCCCGAGCC 61.343 60.000 0.00 0.00 0.00 4.70
2687 3181 3.943137 ATCCTGAACCCCCGAGCCA 62.943 63.158 0.00 0.00 0.00 4.75
2688 3182 4.410400 CCTGAACCCCCGAGCCAC 62.410 72.222 0.00 0.00 0.00 5.01
2689 3183 3.636231 CTGAACCCCCGAGCCACA 61.636 66.667 0.00 0.00 0.00 4.17
2690 3184 3.901797 CTGAACCCCCGAGCCACAC 62.902 68.421 0.00 0.00 0.00 3.82
2691 3185 4.717313 GAACCCCCGAGCCACACC 62.717 72.222 0.00 0.00 0.00 4.16
2696 3190 4.641645 CCCGAGCCACACCTGCAA 62.642 66.667 0.00 0.00 0.00 4.08
2697 3191 3.357079 CCGAGCCACACCTGCAAC 61.357 66.667 0.00 0.00 0.00 4.17
2698 3192 2.281070 CGAGCCACACCTGCAACT 60.281 61.111 0.00 0.00 0.00 3.16
2699 3193 2.610694 CGAGCCACACCTGCAACTG 61.611 63.158 0.00 0.00 0.00 3.16
2700 3194 2.908940 AGCCACACCTGCAACTGC 60.909 61.111 0.00 0.00 42.50 4.40
2701 3195 3.982241 GCCACACCTGCAACTGCC 61.982 66.667 0.00 0.00 41.18 4.85
2702 3196 2.519063 CCACACCTGCAACTGCCA 60.519 61.111 0.00 0.00 41.18 4.92
2703 3197 2.126596 CCACACCTGCAACTGCCAA 61.127 57.895 0.00 0.00 41.18 4.52
2704 3198 1.674764 CCACACCTGCAACTGCCAAA 61.675 55.000 0.00 0.00 41.18 3.28
2705 3199 0.528249 CACACCTGCAACTGCCAAAC 60.528 55.000 0.00 0.00 41.18 2.93
2706 3200 0.969917 ACACCTGCAACTGCCAAACA 60.970 50.000 0.00 0.00 41.18 2.83
2707 3201 0.528249 CACCTGCAACTGCCAAACAC 60.528 55.000 0.00 0.00 41.18 3.32
2708 3202 1.067916 CCTGCAACTGCCAAACACC 59.932 57.895 0.00 0.00 41.18 4.16
2709 3203 1.299316 CTGCAACTGCCAAACACCG 60.299 57.895 0.00 0.00 41.18 4.94
2710 3204 2.027460 GCAACTGCCAAACACCGG 59.973 61.111 0.00 0.00 34.31 5.28
2711 3205 2.485795 GCAACTGCCAAACACCGGA 61.486 57.895 9.46 0.00 34.31 5.14
2712 3206 1.654220 CAACTGCCAAACACCGGAG 59.346 57.895 9.46 1.26 0.00 4.63
2725 3219 3.712907 CGGAGGAAAGGGCGGGAA 61.713 66.667 0.00 0.00 0.00 3.97
2726 3220 2.761160 GGAGGAAAGGGCGGGAAA 59.239 61.111 0.00 0.00 0.00 3.13
2727 3221 1.677966 GGAGGAAAGGGCGGGAAAC 60.678 63.158 0.00 0.00 0.00 2.78
2739 3233 3.097293 GGAAACCCCTCCTTCCCC 58.903 66.667 0.00 0.00 35.95 4.81
2740 3234 2.675371 GAAACCCCTCCTTCCCCG 59.325 66.667 0.00 0.00 0.00 5.73
2741 3235 3.640257 GAAACCCCTCCTTCCCCGC 62.640 68.421 0.00 0.00 0.00 6.13
2746 3240 3.411517 CCTCCTTCCCCGCCACAT 61.412 66.667 0.00 0.00 0.00 3.21
2747 3241 2.124570 CTCCTTCCCCGCCACATG 60.125 66.667 0.00 0.00 0.00 3.21
2748 3242 2.609299 TCCTTCCCCGCCACATGA 60.609 61.111 0.00 0.00 0.00 3.07
2749 3243 2.438434 CCTTCCCCGCCACATGAC 60.438 66.667 0.00 0.00 0.00 3.06
2750 3244 2.350895 CTTCCCCGCCACATGACA 59.649 61.111 0.00 0.00 0.00 3.58
2751 3245 1.303236 CTTCCCCGCCACATGACAA 60.303 57.895 0.00 0.00 0.00 3.18
2752 3246 1.586154 CTTCCCCGCCACATGACAAC 61.586 60.000 0.00 0.00 0.00 3.32
2753 3247 3.061848 CCCCGCCACATGACAACC 61.062 66.667 0.00 0.00 0.00 3.77
2754 3248 3.061848 CCCGCCACATGACAACCC 61.062 66.667 0.00 0.00 0.00 4.11
2755 3249 3.061848 CCGCCACATGACAACCCC 61.062 66.667 0.00 0.00 0.00 4.95
2756 3250 3.061848 CGCCACATGACAACCCCC 61.062 66.667 0.00 0.00 0.00 5.40
2757 3251 2.117206 GCCACATGACAACCCCCA 59.883 61.111 0.00 0.00 0.00 4.96
2758 3252 1.532794 GCCACATGACAACCCCCAA 60.533 57.895 0.00 0.00 0.00 4.12
2759 3253 1.815817 GCCACATGACAACCCCCAAC 61.816 60.000 0.00 0.00 0.00 3.77
2760 3254 1.184970 CCACATGACAACCCCCAACC 61.185 60.000 0.00 0.00 0.00 3.77
2761 3255 0.468958 CACATGACAACCCCCAACCA 60.469 55.000 0.00 0.00 0.00 3.67
2762 3256 0.263172 ACATGACAACCCCCAACCAA 59.737 50.000 0.00 0.00 0.00 3.67
2763 3257 0.968405 CATGACAACCCCCAACCAAG 59.032 55.000 0.00 0.00 0.00 3.61
2764 3258 0.178935 ATGACAACCCCCAACCAAGG 60.179 55.000 0.00 0.00 0.00 3.61
2765 3259 1.289982 TGACAACCCCCAACCAAGGA 61.290 55.000 0.00 0.00 0.00 3.36
2766 3260 0.826256 GACAACCCCCAACCAAGGAC 60.826 60.000 0.00 0.00 0.00 3.85
2767 3261 1.231641 CAACCCCCAACCAAGGACA 59.768 57.895 0.00 0.00 0.00 4.02
2768 3262 1.112916 CAACCCCCAACCAAGGACAC 61.113 60.000 0.00 0.00 0.00 3.67
2769 3263 1.585651 AACCCCCAACCAAGGACACA 61.586 55.000 0.00 0.00 0.00 3.72
2770 3264 1.231641 CCCCCAACCAAGGACACAA 59.768 57.895 0.00 0.00 0.00 3.33
2771 3265 1.112916 CCCCCAACCAAGGACACAAC 61.113 60.000 0.00 0.00 0.00 3.32
2772 3266 1.452145 CCCCAACCAAGGACACAACG 61.452 60.000 0.00 0.00 0.00 4.10
2773 3267 0.464735 CCCAACCAAGGACACAACGA 60.465 55.000 0.00 0.00 0.00 3.85
2774 3268 0.661020 CCAACCAAGGACACAACGAC 59.339 55.000 0.00 0.00 0.00 4.34
2775 3269 0.303493 CAACCAAGGACACAACGACG 59.697 55.000 0.00 0.00 0.00 5.12
2776 3270 0.176219 AACCAAGGACACAACGACGA 59.824 50.000 0.00 0.00 0.00 4.20
2777 3271 0.176219 ACCAAGGACACAACGACGAA 59.824 50.000 0.00 0.00 0.00 3.85
2778 3272 0.580104 CCAAGGACACAACGACGAAC 59.420 55.000 0.00 0.00 0.00 3.95
2779 3273 0.580104 CAAGGACACAACGACGAACC 59.420 55.000 0.00 0.00 0.00 3.62
2780 3274 0.531311 AAGGACACAACGACGAACCC 60.531 55.000 0.00 0.00 0.00 4.11
2781 3275 1.227321 GGACACAACGACGAACCCA 60.227 57.895 0.00 0.00 0.00 4.51
2782 3276 1.219522 GGACACAACGACGAACCCAG 61.220 60.000 0.00 0.00 0.00 4.45
2783 3277 0.529119 GACACAACGACGAACCCAGT 60.529 55.000 0.00 0.00 0.00 4.00
2784 3278 0.529119 ACACAACGACGAACCCAGTC 60.529 55.000 0.00 0.00 35.41 3.51
2789 3283 4.808649 GACGAACCCAGTCGGATC 57.191 61.111 0.00 0.00 45.40 3.36
2790 3284 2.190756 GACGAACCCAGTCGGATCT 58.809 57.895 0.00 0.00 45.40 2.75
2791 3285 1.386533 GACGAACCCAGTCGGATCTA 58.613 55.000 0.00 0.00 45.40 1.98
2792 3286 1.334243 GACGAACCCAGTCGGATCTAG 59.666 57.143 0.00 0.00 45.40 2.43
2793 3287 1.064906 ACGAACCCAGTCGGATCTAGA 60.065 52.381 0.00 0.00 45.40 2.43
2794 3288 1.334243 CGAACCCAGTCGGATCTAGAC 59.666 57.143 12.01 12.01 37.37 2.59
2795 3289 1.334243 GAACCCAGTCGGATCTAGACG 59.666 57.143 13.41 0.00 42.97 4.18
2796 3290 0.545171 ACCCAGTCGGATCTAGACGA 59.455 55.000 13.41 0.00 42.97 4.20
2797 3291 1.064906 ACCCAGTCGGATCTAGACGAA 60.065 52.381 6.99 0.00 42.97 3.85
2798 3292 1.604755 CCCAGTCGGATCTAGACGAAG 59.395 57.143 6.99 3.95 42.97 3.79
2799 3293 1.604755 CCAGTCGGATCTAGACGAAGG 59.395 57.143 6.99 8.51 42.97 3.46
2800 3294 1.002251 CAGTCGGATCTAGACGAAGGC 60.002 57.143 6.99 0.00 42.97 4.35
2801 3295 1.134037 AGTCGGATCTAGACGAAGGCT 60.134 52.381 6.99 0.00 42.97 4.58
2802 3296 1.264826 GTCGGATCTAGACGAAGGCTC 59.735 57.143 6.99 0.00 41.17 4.70
2803 3297 1.134189 TCGGATCTAGACGAAGGCTCA 60.134 52.381 3.17 0.00 36.01 4.26
2804 3298 1.002251 CGGATCTAGACGAAGGCTCAC 60.002 57.143 0.00 0.00 0.00 3.51
2805 3299 1.338655 GGATCTAGACGAAGGCTCACC 59.661 57.143 0.00 0.00 0.00 4.02
2806 3300 1.338655 GATCTAGACGAAGGCTCACCC 59.661 57.143 0.00 0.00 36.11 4.61
2807 3301 0.039180 TCTAGACGAAGGCTCACCCA 59.961 55.000 0.00 0.00 36.11 4.51
2808 3302 0.895530 CTAGACGAAGGCTCACCCAA 59.104 55.000 0.00 0.00 36.11 4.12
2809 3303 0.606604 TAGACGAAGGCTCACCCAAC 59.393 55.000 0.00 0.00 36.11 3.77
2810 3304 1.671379 GACGAAGGCTCACCCAACC 60.671 63.158 0.00 0.00 36.11 3.77
2811 3305 2.359975 CGAAGGCTCACCCAACCC 60.360 66.667 0.00 0.00 36.11 4.11
2812 3306 2.843545 GAAGGCTCACCCAACCCA 59.156 61.111 0.00 0.00 36.11 4.51
2813 3307 1.152830 GAAGGCTCACCCAACCCAA 59.847 57.895 0.00 0.00 36.11 4.12
2814 3308 1.152546 AAGGCTCACCCAACCCAAC 60.153 57.895 0.00 0.00 36.11 3.77
2815 3309 2.976494 AAGGCTCACCCAACCCAACG 62.976 60.000 0.00 0.00 36.11 4.10
2816 3310 2.983592 GCTCACCCAACCCAACGG 60.984 66.667 0.00 0.00 0.00 4.44
2817 3311 2.983592 CTCACCCAACCCAACGGC 60.984 66.667 0.00 0.00 0.00 5.68
2818 3312 4.589675 TCACCCAACCCAACGGCC 62.590 66.667 0.00 0.00 0.00 6.13
2819 3313 4.904590 CACCCAACCCAACGGCCA 62.905 66.667 2.24 0.00 0.00 5.36
2820 3314 4.906537 ACCCAACCCAACGGCCAC 62.907 66.667 2.24 0.00 0.00 5.01
2822 3316 4.939368 CCAACCCAACGGCCACGA 62.939 66.667 2.24 0.00 44.60 4.35
2823 3317 3.353836 CAACCCAACGGCCACGAG 61.354 66.667 2.24 0.00 44.60 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 2.374170 GGGGAACTAGGTCCAAAGTTGA 59.626 50.000 28.03 0.00 39.70 3.18
64 65 6.446781 ACTAGCCAATGAAACATCAAGATG 57.553 37.500 8.45 8.45 44.15 2.90
86 87 4.095036 TCTGTCACACGATCTCATGAGTAC 59.905 45.833 21.92 15.23 0.00 2.73
290 500 9.643693 AGCTGTGTTTCTCATAAAAATAAATGG 57.356 29.630 0.00 0.00 0.00 3.16
314 527 3.058224 ACGAAGGTTACAAATGCTGAAGC 60.058 43.478 0.00 0.00 42.50 3.86
331 544 3.391506 TGCATCCCTGATCATACGAAG 57.608 47.619 0.00 0.00 0.00 3.79
338 551 3.633525 GCTTATGTTTGCATCCCTGATCA 59.366 43.478 0.00 0.00 36.58 2.92
351 564 6.258727 CCAATAGATGAGTGACGCTTATGTTT 59.741 38.462 0.00 0.00 0.00 2.83
353 566 5.069119 TCCAATAGATGAGTGACGCTTATGT 59.931 40.000 0.00 0.00 0.00 2.29
354 567 5.532557 TCCAATAGATGAGTGACGCTTATG 58.467 41.667 0.00 0.00 0.00 1.90
380 593 1.342074 AGGTGTGCAGCTAGACTTCA 58.658 50.000 1.70 0.00 37.39 3.02
383 596 2.938956 AAAAGGTGTGCAGCTAGACT 57.061 45.000 4.23 0.00 38.35 3.24
384 597 3.120165 GCTAAAAAGGTGTGCAGCTAGAC 60.120 47.826 4.23 0.00 38.35 2.59
385 598 3.074412 GCTAAAAAGGTGTGCAGCTAGA 58.926 45.455 4.23 0.00 38.35 2.43
386 599 3.077359 AGCTAAAAAGGTGTGCAGCTAG 58.923 45.455 4.23 0.10 37.58 3.42
387 600 3.140325 AGCTAAAAAGGTGTGCAGCTA 57.860 42.857 4.23 0.00 37.58 3.32
390 603 3.503748 AGCTAAGCTAAAAAGGTGTGCAG 59.496 43.478 0.00 0.00 36.99 4.41
391 604 3.253188 CAGCTAAGCTAAAAAGGTGTGCA 59.747 43.478 8.52 0.00 36.40 4.57
395 616 3.253188 TGTGCAGCTAAGCTAAAAAGGTG 59.747 43.478 11.16 11.16 36.40 4.00
459 680 2.223688 CCTTTTGTTGATGTCGCAACCA 60.224 45.455 0.00 0.00 45.75 3.67
483 704 1.298667 GCCACCAACGGAGGTACAT 59.701 57.895 0.40 0.00 40.77 2.29
510 731 3.076079 TCTGATTGAGATGGCAGCAAA 57.924 42.857 5.19 0.00 0.00 3.68
513 734 3.211865 TGATTCTGATTGAGATGGCAGC 58.788 45.455 0.00 0.00 0.00 5.25
514 735 4.320567 GCATGATTCTGATTGAGATGGCAG 60.321 45.833 0.00 0.00 0.00 4.85
537 758 3.815401 CCTTGTAACAAACTGTCCAGAGG 59.185 47.826 0.40 0.00 0.00 3.69
599 820 8.816894 AGTGGTTGAGAGAAATGATAGTTCTTA 58.183 33.333 0.00 0.00 35.46 2.10
651 872 5.798132 TGCTGTCAGAGAAACATACTCAAT 58.202 37.500 3.32 0.00 36.91 2.57
654 875 4.815269 ACTGCTGTCAGAGAAACATACTC 58.185 43.478 3.32 0.00 42.95 2.59
655 876 4.881019 ACTGCTGTCAGAGAAACATACT 57.119 40.909 3.32 0.00 42.95 2.12
661 882 4.127171 GGTAACAACTGCTGTCAGAGAAA 58.873 43.478 3.32 0.00 42.95 2.52
726 947 2.503895 ATCTTTCTGGGCACTCTTGG 57.496 50.000 0.00 0.00 0.00 3.61
727 948 2.941720 GCTATCTTTCTGGGCACTCTTG 59.058 50.000 0.00 0.00 0.00 3.02
728 949 2.419297 CGCTATCTTTCTGGGCACTCTT 60.419 50.000 0.00 0.00 0.00 2.85
744 965 1.144936 GCTGAAGCAGGGACGCTAT 59.855 57.895 0.00 0.00 42.89 2.97
922 1143 2.903135 GCTTATATGGAGGTGAGAGGCT 59.097 50.000 0.00 0.00 0.00 4.58
986 1208 2.629656 GCCATGGACGTGCTGCTTT 61.630 57.895 18.40 0.00 0.00 3.51
1107 1329 0.727793 CAACCGCATTGCCGTTGTAC 60.728 55.000 25.24 0.00 40.73 2.90
1161 1383 0.036483 TGCTATCTTCGTGCTTGGCA 60.036 50.000 0.00 0.00 35.60 4.92
1253 1475 1.066215 ACATTGGCACGATAGCTGTCA 60.066 47.619 11.32 0.00 42.67 3.58
1255 1477 2.168521 AGTACATTGGCACGATAGCTGT 59.831 45.455 0.00 0.00 42.67 4.40
1269 1491 1.153628 GGAGTGCGCGGAGTACATT 60.154 57.895 13.43 0.00 37.96 2.71
1322 1544 2.430921 CAAGCTCGCCGTCGTCTT 60.431 61.111 0.00 0.00 36.96 3.01
1323 1545 4.421479 CCAAGCTCGCCGTCGTCT 62.421 66.667 0.00 0.00 36.96 4.18
1371 1593 1.627329 AGCTTCTTGATGGAGCTCACA 59.373 47.619 17.19 11.60 0.00 3.58
1563 1788 2.261671 GCCATCACGTCGGTGTCT 59.738 61.111 0.00 0.00 44.68 3.41
1931 2170 5.560966 AACAAGAGCACGAAGAAAAGAAA 57.439 34.783 0.00 0.00 0.00 2.52
1934 2173 4.496895 CACAAACAAGAGCACGAAGAAAAG 59.503 41.667 0.00 0.00 0.00 2.27
1935 2174 4.411327 CACAAACAAGAGCACGAAGAAAA 58.589 39.130 0.00 0.00 0.00 2.29
1936 2175 3.730662 GCACAAACAAGAGCACGAAGAAA 60.731 43.478 0.00 0.00 0.00 2.52
1937 2176 2.223249 GCACAAACAAGAGCACGAAGAA 60.223 45.455 0.00 0.00 0.00 2.52
1938 2177 1.330521 GCACAAACAAGAGCACGAAGA 59.669 47.619 0.00 0.00 0.00 2.87
1939 2178 1.746760 GCACAAACAAGAGCACGAAG 58.253 50.000 0.00 0.00 0.00 3.79
1940 2179 0.027455 CGCACAAACAAGAGCACGAA 59.973 50.000 0.00 0.00 0.00 3.85
1941 2180 0.808060 TCGCACAAACAAGAGCACGA 60.808 50.000 0.00 0.00 0.00 4.35
1942 2181 0.383491 CTCGCACAAACAAGAGCACG 60.383 55.000 0.00 0.00 0.00 5.34
1989 2228 9.577110 CGATCTAAAACACACTATAGGTACAAA 57.423 33.333 4.43 0.00 0.00 2.83
1995 2234 7.432545 CAGTCACGATCTAAAACACACTATAGG 59.567 40.741 4.43 0.00 0.00 2.57
1999 2238 6.080648 ACAGTCACGATCTAAAACACACTA 57.919 37.500 0.00 0.00 0.00 2.74
2003 2489 6.846283 CAGAAAACAGTCACGATCTAAAACAC 59.154 38.462 0.00 0.00 0.00 3.32
2012 2498 4.320494 GCCAAATCAGAAAACAGTCACGAT 60.320 41.667 0.00 0.00 0.00 3.73
2014 2500 3.003689 AGCCAAATCAGAAAACAGTCACG 59.996 43.478 0.00 0.00 0.00 4.35
2015 2501 4.574599 AGCCAAATCAGAAAACAGTCAC 57.425 40.909 0.00 0.00 0.00 3.67
2020 2506 4.144297 ACAGCTAGCCAAATCAGAAAACA 58.856 39.130 12.13 0.00 0.00 2.83
2024 2510 6.237901 TCTAAAACAGCTAGCCAAATCAGAA 58.762 36.000 12.13 0.00 0.00 3.02
2055 2541 1.272769 AGAAGTGAGGTAGCCGAACAC 59.727 52.381 0.00 0.00 0.00 3.32
2057 2543 1.272769 ACAGAAGTGAGGTAGCCGAAC 59.727 52.381 0.00 0.00 0.00 3.95
2065 2551 7.793036 ACTCTACTTTAAAACAGAAGTGAGGT 58.207 34.615 14.25 0.00 36.79 3.85
2066 2552 8.552034 CAACTCTACTTTAAAACAGAAGTGAGG 58.448 37.037 14.25 3.56 36.79 3.86
2068 2554 9.444600 AACAACTCTACTTTAAAACAGAAGTGA 57.555 29.630 11.51 0.00 36.79 3.41
2069 2555 9.704098 GAACAACTCTACTTTAAAACAGAAGTG 57.296 33.333 0.00 0.00 36.79 3.16
2070 2556 8.601476 CGAACAACTCTACTTTAAAACAGAAGT 58.399 33.333 0.00 0.00 39.32 3.01
2071 2557 8.062448 CCGAACAACTCTACTTTAAAACAGAAG 58.938 37.037 0.00 0.00 0.00 2.85
2072 2558 7.466320 GCCGAACAACTCTACTTTAAAACAGAA 60.466 37.037 0.00 0.00 0.00 3.02
2073 2559 6.018507 GCCGAACAACTCTACTTTAAAACAGA 60.019 38.462 0.00 0.00 0.00 3.41
2074 2560 6.018180 AGCCGAACAACTCTACTTTAAAACAG 60.018 38.462 0.00 0.00 0.00 3.16
2075 2561 5.818857 AGCCGAACAACTCTACTTTAAAACA 59.181 36.000 0.00 0.00 0.00 2.83
2076 2562 6.296365 AGCCGAACAACTCTACTTTAAAAC 57.704 37.500 0.00 0.00 0.00 2.43
2077 2563 6.424812 GGTAGCCGAACAACTCTACTTTAAAA 59.575 38.462 0.00 0.00 33.73 1.52
2078 2564 5.928264 GGTAGCCGAACAACTCTACTTTAAA 59.072 40.000 0.00 0.00 33.73 1.52
2079 2565 5.010922 TGGTAGCCGAACAACTCTACTTTAA 59.989 40.000 0.00 0.00 33.73 1.52
2080 2566 4.523943 TGGTAGCCGAACAACTCTACTTTA 59.476 41.667 0.00 0.00 33.73 1.85
2081 2567 3.322828 TGGTAGCCGAACAACTCTACTTT 59.677 43.478 0.00 0.00 33.73 2.66
2082 2568 2.895404 TGGTAGCCGAACAACTCTACTT 59.105 45.455 0.00 0.00 33.73 2.24
2083 2569 2.230750 GTGGTAGCCGAACAACTCTACT 59.769 50.000 0.00 0.00 33.73 2.57
2084 2570 2.029649 TGTGGTAGCCGAACAACTCTAC 60.030 50.000 0.00 0.00 0.00 2.59
2085 2571 2.029649 GTGTGGTAGCCGAACAACTCTA 60.030 50.000 0.00 0.00 0.00 2.43
2086 2572 1.045407 TGTGGTAGCCGAACAACTCT 58.955 50.000 0.00 0.00 0.00 3.24
2087 2573 1.145803 GTGTGGTAGCCGAACAACTC 58.854 55.000 0.00 0.00 0.00 3.01
2088 2574 0.756903 AGTGTGGTAGCCGAACAACT 59.243 50.000 0.00 0.00 0.00 3.16
2089 2575 1.529865 GAAGTGTGGTAGCCGAACAAC 59.470 52.381 0.00 0.00 0.00 3.32
2090 2576 1.414919 AGAAGTGTGGTAGCCGAACAA 59.585 47.619 0.00 0.00 0.00 2.83
2091 2577 1.045407 AGAAGTGTGGTAGCCGAACA 58.955 50.000 0.00 0.00 0.00 3.18
2092 2578 2.165319 AAGAAGTGTGGTAGCCGAAC 57.835 50.000 0.00 0.00 0.00 3.95
2093 2579 2.875933 CAAAAGAAGTGTGGTAGCCGAA 59.124 45.455 0.00 0.00 0.00 4.30
2094 2580 2.103432 TCAAAAGAAGTGTGGTAGCCGA 59.897 45.455 0.00 0.00 0.00 5.54
2095 2581 2.480419 CTCAAAAGAAGTGTGGTAGCCG 59.520 50.000 0.00 0.00 0.00 5.52
2096 2582 2.226674 GCTCAAAAGAAGTGTGGTAGCC 59.773 50.000 0.00 0.00 0.00 3.93
2097 2583 2.226674 GGCTCAAAAGAAGTGTGGTAGC 59.773 50.000 0.00 0.00 0.00 3.58
2098 2584 2.480419 CGGCTCAAAAGAAGTGTGGTAG 59.520 50.000 0.00 0.00 0.00 3.18
2099 2585 2.158871 ACGGCTCAAAAGAAGTGTGGTA 60.159 45.455 0.00 0.00 0.00 3.25
2100 2586 1.308998 CGGCTCAAAAGAAGTGTGGT 58.691 50.000 0.00 0.00 0.00 4.16
2101 2587 1.308998 ACGGCTCAAAAGAAGTGTGG 58.691 50.000 0.00 0.00 0.00 4.17
2102 2588 3.108144 CAAACGGCTCAAAAGAAGTGTG 58.892 45.455 0.00 0.00 0.00 3.82
2103 2589 2.479560 GCAAACGGCTCAAAAGAAGTGT 60.480 45.455 0.00 0.00 40.25 3.55
2104 2590 2.119457 GCAAACGGCTCAAAAGAAGTG 58.881 47.619 0.00 0.00 40.25 3.16
2105 2591 1.067060 GGCAAACGGCTCAAAAGAAGT 59.933 47.619 0.00 0.00 44.01 3.01
2106 2592 1.770957 GGCAAACGGCTCAAAAGAAG 58.229 50.000 0.00 0.00 44.01 2.85
2107 2593 0.030101 CGGCAAACGGCTCAAAAGAA 59.970 50.000 0.00 0.00 44.01 2.52
2108 2594 1.652012 CGGCAAACGGCTCAAAAGA 59.348 52.632 0.00 0.00 44.01 2.52
2109 2595 4.226803 CGGCAAACGGCTCAAAAG 57.773 55.556 0.00 0.00 44.01 2.27
2116 2602 9.281413 CTTTATTTATAAAGCACGGCAAACGGC 62.281 40.741 8.78 0.00 43.33 5.68
2138 2624 8.806429 ATGTATCATTTGGTCACATGACTTTA 57.194 30.769 11.63 0.00 44.20 1.85
2140 2626 8.985315 ATATGTATCATTTGGTCACATGACTT 57.015 30.769 11.63 0.00 44.20 3.01
2142 2628 8.623903 ACAATATGTATCATTTGGTCACATGAC 58.376 33.333 0.00 3.27 44.04 3.06
2143 2629 8.750515 ACAATATGTATCATTTGGTCACATGA 57.249 30.769 0.00 2.78 33.92 3.07
2173 2659 7.687941 ATCGATCAACTTGTATGAGGTTTTT 57.312 32.000 0.00 0.00 0.00 1.94
2174 2660 8.786826 TTATCGATCAACTTGTATGAGGTTTT 57.213 30.769 0.00 0.00 0.00 2.43
2175 2661 8.786826 TTTATCGATCAACTTGTATGAGGTTT 57.213 30.769 0.00 0.00 0.00 3.27
2176 2662 8.786826 TTTTATCGATCAACTTGTATGAGGTT 57.213 30.769 0.00 0.00 0.00 3.50
2177 2663 8.786826 TTTTTATCGATCAACTTGTATGAGGT 57.213 30.769 0.00 0.00 0.00 3.85
2178 2664 9.098355 TCTTTTTATCGATCAACTTGTATGAGG 57.902 33.333 0.00 0.00 0.00 3.86
2179 2665 9.907576 GTCTTTTTATCGATCAACTTGTATGAG 57.092 33.333 0.00 0.00 0.00 2.90
2180 2666 8.592155 CGTCTTTTTATCGATCAACTTGTATGA 58.408 33.333 0.00 0.00 0.00 2.15
2181 2667 8.592155 TCGTCTTTTTATCGATCAACTTGTATG 58.408 33.333 0.00 0.00 0.00 2.39
2182 2668 8.592998 GTCGTCTTTTTATCGATCAACTTGTAT 58.407 33.333 0.00 0.00 36.08 2.29
2183 2669 7.595875 TGTCGTCTTTTTATCGATCAACTTGTA 59.404 33.333 0.00 0.00 36.08 2.41
2184 2670 6.422701 TGTCGTCTTTTTATCGATCAACTTGT 59.577 34.615 0.00 0.00 36.08 3.16
2185 2671 6.732392 GTGTCGTCTTTTTATCGATCAACTTG 59.268 38.462 0.00 0.00 36.08 3.16
2186 2672 6.422701 TGTGTCGTCTTTTTATCGATCAACTT 59.577 34.615 0.00 0.00 36.08 2.66
2187 2673 5.924254 TGTGTCGTCTTTTTATCGATCAACT 59.076 36.000 0.00 0.00 36.08 3.16
2188 2674 6.148270 TGTGTCGTCTTTTTATCGATCAAC 57.852 37.500 0.00 0.00 36.08 3.18
2189 2675 6.201234 TGTTGTGTCGTCTTTTTATCGATCAA 59.799 34.615 0.00 0.00 36.08 2.57
2190 2676 5.692654 TGTTGTGTCGTCTTTTTATCGATCA 59.307 36.000 0.00 0.00 36.08 2.92
2191 2677 6.148270 TGTTGTGTCGTCTTTTTATCGATC 57.852 37.500 0.00 0.00 36.08 3.69
2192 2678 6.533819 TTGTTGTGTCGTCTTTTTATCGAT 57.466 33.333 2.16 2.16 36.08 3.59
2193 2679 5.970140 TTGTTGTGTCGTCTTTTTATCGA 57.030 34.783 0.00 0.00 0.00 3.59
2194 2680 6.848800 TGATTTGTTGTGTCGTCTTTTTATCG 59.151 34.615 0.00 0.00 0.00 2.92
2195 2681 8.067784 TCTGATTTGTTGTGTCGTCTTTTTATC 58.932 33.333 0.00 0.00 0.00 1.75
2196 2682 7.855904 GTCTGATTTGTTGTGTCGTCTTTTTAT 59.144 33.333 0.00 0.00 0.00 1.40
2197 2683 7.148390 TGTCTGATTTGTTGTGTCGTCTTTTTA 60.148 33.333 0.00 0.00 0.00 1.52
2198 2684 6.027749 GTCTGATTTGTTGTGTCGTCTTTTT 58.972 36.000 0.00 0.00 0.00 1.94
2199 2685 5.123186 TGTCTGATTTGTTGTGTCGTCTTTT 59.877 36.000 0.00 0.00 0.00 2.27
2200 2686 4.634004 TGTCTGATTTGTTGTGTCGTCTTT 59.366 37.500 0.00 0.00 0.00 2.52
2201 2687 4.034048 GTGTCTGATTTGTTGTGTCGTCTT 59.966 41.667 0.00 0.00 0.00 3.01
2202 2688 3.555956 GTGTCTGATTTGTTGTGTCGTCT 59.444 43.478 0.00 0.00 0.00 4.18
2203 2689 3.601586 CGTGTCTGATTTGTTGTGTCGTC 60.602 47.826 0.00 0.00 0.00 4.20
2210 2696 5.108254 GCTTTTTAGCGTGTCTGATTTGTTG 60.108 40.000 0.00 0.00 0.00 3.33
2244 2730 1.002868 CTGGAGGAGCCTGGTTGTG 60.003 63.158 0.00 0.00 37.63 3.33
2256 2742 2.704464 TCTTGATGACATGCTGGAGG 57.296 50.000 0.00 0.00 0.00 4.30
2258 2744 4.577693 GCTTATTCTTGATGACATGCTGGA 59.422 41.667 0.00 0.00 0.00 3.86
2260 2746 5.163693 TGTGCTTATTCTTGATGACATGCTG 60.164 40.000 0.00 0.00 0.00 4.41
2261 2747 4.945543 TGTGCTTATTCTTGATGACATGCT 59.054 37.500 0.00 0.00 0.00 3.79
2262 2748 5.239359 TGTGCTTATTCTTGATGACATGC 57.761 39.130 0.00 0.00 0.00 4.06
2263 2749 7.023197 TCATGTGCTTATTCTTGATGACATG 57.977 36.000 0.00 0.00 40.40 3.21
2264 2750 7.818997 ATCATGTGCTTATTCTTGATGACAT 57.181 32.000 0.00 0.00 30.83 3.06
2265 2751 8.913487 ATATCATGTGCTTATTCTTGATGACA 57.087 30.769 0.00 0.00 33.04 3.58
2274 2760 9.159364 TGCATCTCTTATATCATGTGCTTATTC 57.841 33.333 0.00 0.00 32.87 1.75
2293 2779 4.083164 TGTCATTGAATGTGTGTGCATCTC 60.083 41.667 4.93 0.00 0.00 2.75
2294 2780 3.822167 TGTCATTGAATGTGTGTGCATCT 59.178 39.130 4.93 0.00 0.00 2.90
2295 2781 4.163458 TGTCATTGAATGTGTGTGCATC 57.837 40.909 4.93 0.00 0.00 3.91
2296 2782 4.587584 TTGTCATTGAATGTGTGTGCAT 57.412 36.364 4.93 0.00 0.00 3.96
2297 2783 4.111198 GTTTGTCATTGAATGTGTGTGCA 58.889 39.130 4.93 0.00 0.00 4.57
2298 2784 3.490526 GGTTTGTCATTGAATGTGTGTGC 59.509 43.478 4.93 0.00 0.00 4.57
2301 2787 3.554752 GGGGGTTTGTCATTGAATGTGTG 60.555 47.826 4.93 0.00 0.00 3.82
2302 2788 2.632512 GGGGGTTTGTCATTGAATGTGT 59.367 45.455 4.93 0.00 0.00 3.72
2303 2789 3.317603 GGGGGTTTGTCATTGAATGTG 57.682 47.619 4.93 0.00 0.00 3.21
2322 2808 3.717294 CTCTCGGGGTGGGTTGGG 61.717 72.222 0.00 0.00 0.00 4.12
2323 2809 3.717294 CCTCTCGGGGTGGGTTGG 61.717 72.222 0.00 0.00 0.00 3.77
2333 2819 1.502163 GCGCATCATTTCCCTCTCGG 61.502 60.000 0.30 0.00 0.00 4.63
2334 2820 1.502163 GGCGCATCATTTCCCTCTCG 61.502 60.000 10.83 0.00 0.00 4.04
2335 2821 1.502163 CGGCGCATCATTTCCCTCTC 61.502 60.000 10.83 0.00 0.00 3.20
2336 2822 1.524621 CGGCGCATCATTTCCCTCT 60.525 57.895 10.83 0.00 0.00 3.69
2337 2823 3.025619 CGGCGCATCATTTCCCTC 58.974 61.111 10.83 0.00 0.00 4.30
2356 2847 3.245315 CTTAAGGCGGACGCGACG 61.245 66.667 15.93 18.59 43.06 5.12
2365 2856 3.810310 AACTCTCATCCTCTTAAGGCG 57.190 47.619 1.85 0.00 43.02 5.52
2387 2878 2.330440 TTTGCAAGCAGTGAGAGTGA 57.670 45.000 0.00 0.00 0.00 3.41
2391 2882 2.346766 TCCTTTTGCAAGCAGTGAGA 57.653 45.000 0.00 0.00 0.00 3.27
2394 2885 1.337447 CCCATCCTTTTGCAAGCAGTG 60.337 52.381 0.00 0.00 0.00 3.66
2395 2886 0.971386 CCCATCCTTTTGCAAGCAGT 59.029 50.000 0.00 0.00 0.00 4.40
2396 2887 0.971386 ACCCATCCTTTTGCAAGCAG 59.029 50.000 0.00 0.00 0.00 4.24
2401 2892 1.377690 TCCCTACCCATCCTTTTGCA 58.622 50.000 0.00 0.00 0.00 4.08
2408 2899 2.753168 GCCTTGATTTCCCTACCCATCC 60.753 54.545 0.00 0.00 0.00 3.51
2409 2900 2.587522 GCCTTGATTTCCCTACCCATC 58.412 52.381 0.00 0.00 0.00 3.51
2410 2901 1.133792 CGCCTTGATTTCCCTACCCAT 60.134 52.381 0.00 0.00 0.00 4.00
2411 2902 0.254747 CGCCTTGATTTCCCTACCCA 59.745 55.000 0.00 0.00 0.00 4.51
2418 2911 1.313091 GGGGTGTCGCCTTGATTTCC 61.313 60.000 1.66 0.00 37.43 3.13
2438 2931 1.388837 GCCGGTGTTGTGTCCCTTTT 61.389 55.000 1.90 0.00 0.00 2.27
2440 2933 2.203294 GCCGGTGTTGTGTCCCTT 60.203 61.111 1.90 0.00 0.00 3.95
2454 2948 2.478370 CCAATAGTGACAATGCTTGCCG 60.478 50.000 0.00 0.00 0.00 5.69
2455 2949 2.736400 GCCAATAGTGACAATGCTTGCC 60.736 50.000 0.00 0.00 0.00 4.52
2470 2964 1.093972 CTTCACGCATGGTGCCAATA 58.906 50.000 8.87 0.00 46.56 1.90
2473 2967 3.364441 GCTTCACGCATGGTGCCA 61.364 61.111 8.87 0.00 46.56 4.92
2520 3014 3.435026 CCATGGTGGTATGGGTTCCTTAG 60.435 52.174 2.57 0.00 43.16 2.18
2521 3015 2.512056 CCATGGTGGTATGGGTTCCTTA 59.488 50.000 2.57 0.00 43.16 2.69
2546 3040 2.168313 GTGCATGGTTATTCCCCTTTGG 59.832 50.000 0.00 0.00 34.77 3.28
2547 3041 2.168313 GGTGCATGGTTATTCCCCTTTG 59.832 50.000 0.00 0.00 34.77 2.77
2548 3042 2.044353 AGGTGCATGGTTATTCCCCTTT 59.956 45.455 0.00 0.00 34.77 3.11
2549 3043 1.645919 AGGTGCATGGTTATTCCCCTT 59.354 47.619 0.00 0.00 34.77 3.95
2550 3044 1.308877 AGGTGCATGGTTATTCCCCT 58.691 50.000 0.00 0.00 34.77 4.79
2551 3045 1.756538 CAAGGTGCATGGTTATTCCCC 59.243 52.381 0.00 0.00 34.77 4.81
2552 3046 1.136891 GCAAGGTGCATGGTTATTCCC 59.863 52.381 0.00 0.00 44.26 3.97
2553 3047 2.584492 GCAAGGTGCATGGTTATTCC 57.416 50.000 0.00 0.00 44.26 3.01
2564 3058 0.889994 TCATGTGAATGGCAAGGTGC 59.110 50.000 0.00 0.00 44.08 5.01
2565 3059 1.203052 GGTCATGTGAATGGCAAGGTG 59.797 52.381 0.00 0.00 0.00 4.00
2566 3060 1.203038 TGGTCATGTGAATGGCAAGGT 60.203 47.619 0.00 0.00 0.00 3.50
2567 3061 1.548081 TGGTCATGTGAATGGCAAGG 58.452 50.000 0.00 0.00 0.00 3.61
2568 3062 3.581755 CTTTGGTCATGTGAATGGCAAG 58.418 45.455 0.00 0.00 0.00 4.01
2569 3063 2.288948 GCTTTGGTCATGTGAATGGCAA 60.289 45.455 0.00 0.00 0.00 4.52
2570 3064 1.273048 GCTTTGGTCATGTGAATGGCA 59.727 47.619 0.00 0.00 0.00 4.92
2571 3065 1.273048 TGCTTTGGTCATGTGAATGGC 59.727 47.619 0.00 0.00 0.00 4.40
2572 3066 2.669113 CGTGCTTTGGTCATGTGAATGG 60.669 50.000 0.00 0.00 0.00 3.16
2573 3067 2.587956 CGTGCTTTGGTCATGTGAATG 58.412 47.619 0.00 0.00 0.00 2.67
2574 3068 1.068333 GCGTGCTTTGGTCATGTGAAT 60.068 47.619 0.00 0.00 0.00 2.57
2575 3069 0.310543 GCGTGCTTTGGTCATGTGAA 59.689 50.000 0.00 0.00 0.00 3.18
2576 3070 0.817229 TGCGTGCTTTGGTCATGTGA 60.817 50.000 0.00 0.00 0.00 3.58
2577 3071 0.030504 TTGCGTGCTTTGGTCATGTG 59.969 50.000 0.00 0.00 0.00 3.21
2578 3072 0.743688 TTTGCGTGCTTTGGTCATGT 59.256 45.000 0.00 0.00 0.00 3.21
2579 3073 1.130955 GTTTGCGTGCTTTGGTCATG 58.869 50.000 0.00 0.00 0.00 3.07
2580 3074 0.743688 TGTTTGCGTGCTTTGGTCAT 59.256 45.000 0.00 0.00 0.00 3.06
2581 3075 0.528017 TTGTTTGCGTGCTTTGGTCA 59.472 45.000 0.00 0.00 0.00 4.02
2582 3076 0.920664 GTTGTTTGCGTGCTTTGGTC 59.079 50.000 0.00 0.00 0.00 4.02
2583 3077 0.244994 TGTTGTTTGCGTGCTTTGGT 59.755 45.000 0.00 0.00 0.00 3.67
2584 3078 0.644843 GTGTTGTTTGCGTGCTTTGG 59.355 50.000 0.00 0.00 0.00 3.28
2585 3079 1.321148 CAGTGTTGTTTGCGTGCTTTG 59.679 47.619 0.00 0.00 0.00 2.77
2586 3080 1.627879 CAGTGTTGTTTGCGTGCTTT 58.372 45.000 0.00 0.00 0.00 3.51
2587 3081 0.801836 GCAGTGTTGTTTGCGTGCTT 60.802 50.000 0.00 0.00 0.00 3.91
2588 3082 1.226660 GCAGTGTTGTTTGCGTGCT 60.227 52.632 0.00 0.00 0.00 4.40
2589 3083 0.801836 AAGCAGTGTTGTTTGCGTGC 60.802 50.000 0.00 0.00 44.80 5.34
2590 3084 0.915904 CAAGCAGTGTTGTTTGCGTG 59.084 50.000 0.00 0.00 44.80 5.34
2591 3085 0.808125 TCAAGCAGTGTTGTTTGCGT 59.192 45.000 0.00 0.00 42.98 5.24
2592 3086 1.782569 CATCAAGCAGTGTTGTTTGCG 59.217 47.619 0.00 0.00 42.98 4.85
2593 3087 2.129607 CCATCAAGCAGTGTTGTTTGC 58.870 47.619 0.00 0.00 42.98 3.68
2594 3088 3.316029 TCTCCATCAAGCAGTGTTGTTTG 59.684 43.478 0.00 0.00 44.16 2.93
2595 3089 3.554934 TCTCCATCAAGCAGTGTTGTTT 58.445 40.909 0.00 0.00 0.00 2.83
2596 3090 3.144506 CTCTCCATCAAGCAGTGTTGTT 58.855 45.455 0.00 0.00 0.00 2.83
2597 3091 2.105477 ACTCTCCATCAAGCAGTGTTGT 59.895 45.455 0.00 0.00 0.00 3.32
2598 3092 2.740981 GACTCTCCATCAAGCAGTGTTG 59.259 50.000 0.00 0.00 0.00 3.33
2599 3093 2.369860 TGACTCTCCATCAAGCAGTGTT 59.630 45.455 0.00 0.00 0.00 3.32
2600 3094 1.973515 TGACTCTCCATCAAGCAGTGT 59.026 47.619 0.00 0.00 0.00 3.55
2601 3095 2.756840 TGACTCTCCATCAAGCAGTG 57.243 50.000 0.00 0.00 0.00 3.66
2602 3096 3.777106 TTTGACTCTCCATCAAGCAGT 57.223 42.857 0.00 0.00 37.38 4.40
2603 3097 3.181499 GCATTTGACTCTCCATCAAGCAG 60.181 47.826 0.00 0.00 37.38 4.24
2604 3098 2.751259 GCATTTGACTCTCCATCAAGCA 59.249 45.455 0.00 0.00 37.38 3.91
2605 3099 2.751259 TGCATTTGACTCTCCATCAAGC 59.249 45.455 0.00 0.00 37.38 4.01
2606 3100 3.754850 TGTGCATTTGACTCTCCATCAAG 59.245 43.478 0.00 0.00 37.38 3.02
2607 3101 3.753815 TGTGCATTTGACTCTCCATCAA 58.246 40.909 0.00 0.00 34.27 2.57
2608 3102 3.244665 ACTGTGCATTTGACTCTCCATCA 60.245 43.478 0.00 0.00 0.00 3.07
2609 3103 3.341823 ACTGTGCATTTGACTCTCCATC 58.658 45.455 0.00 0.00 0.00 3.51
2610 3104 3.244665 TGACTGTGCATTTGACTCTCCAT 60.245 43.478 0.00 0.00 0.00 3.41
2611 3105 2.104622 TGACTGTGCATTTGACTCTCCA 59.895 45.455 0.00 0.00 0.00 3.86
2612 3106 2.740981 CTGACTGTGCATTTGACTCTCC 59.259 50.000 0.00 0.00 0.00 3.71
2613 3107 3.397482 ACTGACTGTGCATTTGACTCTC 58.603 45.455 0.00 0.00 0.00 3.20
2614 3108 3.181462 TGACTGACTGTGCATTTGACTCT 60.181 43.478 0.00 0.00 0.00 3.24
2615 3109 3.059325 GTGACTGACTGTGCATTTGACTC 60.059 47.826 0.00 0.00 0.00 3.36
2616 3110 2.874701 GTGACTGACTGTGCATTTGACT 59.125 45.455 0.00 0.00 0.00 3.41
2617 3111 2.031682 GGTGACTGACTGTGCATTTGAC 60.032 50.000 0.00 0.00 0.00 3.18
2618 3112 2.221169 GGTGACTGACTGTGCATTTGA 58.779 47.619 0.00 0.00 0.00 2.69
2619 3113 1.948834 TGGTGACTGACTGTGCATTTG 59.051 47.619 0.00 0.00 0.00 2.32
2620 3114 2.346766 TGGTGACTGACTGTGCATTT 57.653 45.000 0.00 0.00 0.00 2.32
2621 3115 2.224606 CTTGGTGACTGACTGTGCATT 58.775 47.619 0.00 0.00 0.00 3.56
2622 3116 1.544093 CCTTGGTGACTGACTGTGCAT 60.544 52.381 0.00 0.00 0.00 3.96
2623 3117 0.179048 CCTTGGTGACTGACTGTGCA 60.179 55.000 0.00 0.00 0.00 4.57
2624 3118 0.886490 CCCTTGGTGACTGACTGTGC 60.886 60.000 0.00 0.00 0.00 4.57
2625 3119 0.469917 ACCCTTGGTGACTGACTGTG 59.530 55.000 0.00 0.00 32.98 3.66
2626 3120 0.759346 GACCCTTGGTGACTGACTGT 59.241 55.000 0.00 0.00 35.25 3.55
2627 3121 0.319900 CGACCCTTGGTGACTGACTG 60.320 60.000 0.00 0.00 35.25 3.51
2628 3122 2.050269 CGACCCTTGGTGACTGACT 58.950 57.895 0.00 0.00 35.25 3.41
2629 3123 1.668151 GCGACCCTTGGTGACTGAC 60.668 63.158 0.00 0.00 35.25 3.51
2630 3124 1.837051 AGCGACCCTTGGTGACTGA 60.837 57.895 0.00 0.00 35.25 3.41
2631 3125 1.669115 CAGCGACCCTTGGTGACTG 60.669 63.158 0.00 0.00 35.25 3.51
2632 3126 2.743718 CAGCGACCCTTGGTGACT 59.256 61.111 0.00 0.00 35.25 3.41
2633 3127 3.050275 GCAGCGACCCTTGGTGAC 61.050 66.667 0.00 0.00 35.25 3.67
2634 3128 4.329545 GGCAGCGACCCTTGGTGA 62.330 66.667 0.00 0.00 35.25 4.02
2642 3136 2.592861 GATGATGGGGCAGCGACC 60.593 66.667 0.00 0.00 0.00 4.79
2643 3137 2.182842 GTGATGATGGGGCAGCGAC 61.183 63.158 0.00 0.00 0.00 5.19
2644 3138 2.190313 GTGATGATGGGGCAGCGA 59.810 61.111 0.00 0.00 0.00 4.93
2645 3139 1.750018 TTGTGATGATGGGGCAGCG 60.750 57.895 0.00 0.00 0.00 5.18
2646 3140 1.669999 GGTTGTGATGATGGGGCAGC 61.670 60.000 0.00 0.00 0.00 5.25
2647 3141 1.039233 GGGTTGTGATGATGGGGCAG 61.039 60.000 0.00 0.00 0.00 4.85
2648 3142 1.000233 GGGTTGTGATGATGGGGCA 60.000 57.895 0.00 0.00 0.00 5.36
2649 3143 0.550914 TAGGGTTGTGATGATGGGGC 59.449 55.000 0.00 0.00 0.00 5.80
2650 3144 3.490348 GATTAGGGTTGTGATGATGGGG 58.510 50.000 0.00 0.00 0.00 4.96
2651 3145 3.139025 AGGATTAGGGTTGTGATGATGGG 59.861 47.826 0.00 0.00 0.00 4.00
2652 3146 4.139786 CAGGATTAGGGTTGTGATGATGG 58.860 47.826 0.00 0.00 0.00 3.51
2653 3147 5.039920 TCAGGATTAGGGTTGTGATGATG 57.960 43.478 0.00 0.00 0.00 3.07
2654 3148 5.440610 GTTCAGGATTAGGGTTGTGATGAT 58.559 41.667 0.00 0.00 0.00 2.45
2655 3149 4.324254 GGTTCAGGATTAGGGTTGTGATGA 60.324 45.833 0.00 0.00 0.00 2.92
2656 3150 3.947834 GGTTCAGGATTAGGGTTGTGATG 59.052 47.826 0.00 0.00 0.00 3.07
2657 3151 3.053619 GGGTTCAGGATTAGGGTTGTGAT 60.054 47.826 0.00 0.00 0.00 3.06
2658 3152 2.307686 GGGTTCAGGATTAGGGTTGTGA 59.692 50.000 0.00 0.00 0.00 3.58
2659 3153 2.620627 GGGGTTCAGGATTAGGGTTGTG 60.621 54.545 0.00 0.00 0.00 3.33
2660 3154 1.639108 GGGGTTCAGGATTAGGGTTGT 59.361 52.381 0.00 0.00 0.00 3.32
2661 3155 1.063942 GGGGGTTCAGGATTAGGGTTG 60.064 57.143 0.00 0.00 0.00 3.77
2662 3156 1.305886 GGGGGTTCAGGATTAGGGTT 58.694 55.000 0.00 0.00 0.00 4.11
2663 3157 0.986550 CGGGGGTTCAGGATTAGGGT 60.987 60.000 0.00 0.00 0.00 4.34
2664 3158 0.693092 TCGGGGGTTCAGGATTAGGG 60.693 60.000 0.00 0.00 0.00 3.53
2665 3159 0.759346 CTCGGGGGTTCAGGATTAGG 59.241 60.000 0.00 0.00 0.00 2.69
2666 3160 0.106894 GCTCGGGGGTTCAGGATTAG 59.893 60.000 0.00 0.00 0.00 1.73
2667 3161 1.342672 GGCTCGGGGGTTCAGGATTA 61.343 60.000 0.00 0.00 0.00 1.75
2668 3162 2.680370 GGCTCGGGGGTTCAGGATT 61.680 63.158 0.00 0.00 0.00 3.01
2669 3163 3.090532 GGCTCGGGGGTTCAGGAT 61.091 66.667 0.00 0.00 0.00 3.24
2670 3164 4.649705 TGGCTCGGGGGTTCAGGA 62.650 66.667 0.00 0.00 0.00 3.86
2671 3165 4.410400 GTGGCTCGGGGGTTCAGG 62.410 72.222 0.00 0.00 0.00 3.86
2672 3166 3.636231 TGTGGCTCGGGGGTTCAG 61.636 66.667 0.00 0.00 0.00 3.02
2673 3167 3.948719 GTGTGGCTCGGGGGTTCA 61.949 66.667 0.00 0.00 0.00 3.18
2674 3168 4.717313 GGTGTGGCTCGGGGGTTC 62.717 72.222 0.00 0.00 0.00 3.62
2679 3173 4.641645 TTGCAGGTGTGGCTCGGG 62.642 66.667 0.00 0.00 0.00 5.14
2680 3174 3.357079 GTTGCAGGTGTGGCTCGG 61.357 66.667 0.00 0.00 0.00 4.63
2681 3175 2.281070 AGTTGCAGGTGTGGCTCG 60.281 61.111 0.00 0.00 0.00 5.03
2682 3176 2.912624 GCAGTTGCAGGTGTGGCTC 61.913 63.158 0.00 0.00 41.59 4.70
2683 3177 2.908940 GCAGTTGCAGGTGTGGCT 60.909 61.111 0.00 0.00 41.59 4.75
2684 3178 3.982241 GGCAGTTGCAGGTGTGGC 61.982 66.667 6.43 0.00 44.36 5.01
2685 3179 1.674764 TTTGGCAGTTGCAGGTGTGG 61.675 55.000 6.43 0.00 44.36 4.17
2686 3180 0.528249 GTTTGGCAGTTGCAGGTGTG 60.528 55.000 6.43 0.00 44.36 3.82
2687 3181 0.969917 TGTTTGGCAGTTGCAGGTGT 60.970 50.000 6.43 0.00 44.36 4.16
2688 3182 0.528249 GTGTTTGGCAGTTGCAGGTG 60.528 55.000 6.43 0.00 44.36 4.00
2689 3183 1.675720 GGTGTTTGGCAGTTGCAGGT 61.676 55.000 6.43 0.00 44.36 4.00
2690 3184 1.067916 GGTGTTTGGCAGTTGCAGG 59.932 57.895 6.43 0.00 44.36 4.85
2691 3185 1.299316 CGGTGTTTGGCAGTTGCAG 60.299 57.895 6.43 0.00 44.36 4.41
2692 3186 2.780094 CCGGTGTTTGGCAGTTGCA 61.780 57.895 6.43 0.00 44.36 4.08
2693 3187 2.027460 CCGGTGTTTGGCAGTTGC 59.973 61.111 0.00 0.00 41.14 4.17
2694 3188 1.654220 CTCCGGTGTTTGGCAGTTG 59.346 57.895 0.00 0.00 0.00 3.16
2695 3189 1.528309 CCTCCGGTGTTTGGCAGTT 60.528 57.895 0.00 0.00 0.00 3.16
2696 3190 1.990160 TTCCTCCGGTGTTTGGCAGT 61.990 55.000 0.00 0.00 0.00 4.40
2697 3191 0.821711 TTTCCTCCGGTGTTTGGCAG 60.822 55.000 0.00 0.00 0.00 4.85
2698 3192 0.821711 CTTTCCTCCGGTGTTTGGCA 60.822 55.000 0.00 0.00 0.00 4.92
2699 3193 1.524008 CCTTTCCTCCGGTGTTTGGC 61.524 60.000 0.00 0.00 0.00 4.52
2700 3194 0.893727 CCCTTTCCTCCGGTGTTTGG 60.894 60.000 0.00 0.00 0.00 3.28
2701 3195 1.524008 GCCCTTTCCTCCGGTGTTTG 61.524 60.000 0.00 0.00 0.00 2.93
2702 3196 1.228459 GCCCTTTCCTCCGGTGTTT 60.228 57.895 0.00 0.00 0.00 2.83
2703 3197 2.434774 GCCCTTTCCTCCGGTGTT 59.565 61.111 0.00 0.00 0.00 3.32
2704 3198 4.016706 CGCCCTTTCCTCCGGTGT 62.017 66.667 0.00 0.00 0.00 4.16
2705 3199 4.778143 CCGCCCTTTCCTCCGGTG 62.778 72.222 0.00 0.00 36.18 4.94
2708 3202 3.262448 TTTCCCGCCCTTTCCTCCG 62.262 63.158 0.00 0.00 0.00 4.63
2709 3203 1.677966 GTTTCCCGCCCTTTCCTCC 60.678 63.158 0.00 0.00 0.00 4.30
2710 3204 1.677966 GGTTTCCCGCCCTTTCCTC 60.678 63.158 0.00 0.00 0.00 3.71
2711 3205 2.439245 GGTTTCCCGCCCTTTCCT 59.561 61.111 0.00 0.00 0.00 3.36
2712 3206 2.678934 GGGTTTCCCGCCCTTTCC 60.679 66.667 0.00 0.00 42.81 3.13
2713 3207 2.678934 GGGGTTTCCCGCCCTTTC 60.679 66.667 0.06 0.00 46.66 2.62
2722 3216 2.980177 CGGGGAAGGAGGGGTTTCC 61.980 68.421 0.00 0.00 37.52 3.13
2723 3217 2.675371 CGGGGAAGGAGGGGTTTC 59.325 66.667 0.00 0.00 0.00 2.78
2724 3218 3.658422 GCGGGGAAGGAGGGGTTT 61.658 66.667 0.00 0.00 0.00 3.27
2729 3223 3.411517 ATGTGGCGGGGAAGGAGG 61.412 66.667 0.00 0.00 0.00 4.30
2730 3224 2.124570 CATGTGGCGGGGAAGGAG 60.125 66.667 0.00 0.00 0.00 3.69
2731 3225 2.609299 TCATGTGGCGGGGAAGGA 60.609 61.111 0.00 0.00 0.00 3.36
2732 3226 2.438434 GTCATGTGGCGGGGAAGG 60.438 66.667 0.00 0.00 0.00 3.46
2733 3227 1.303236 TTGTCATGTGGCGGGGAAG 60.303 57.895 0.00 0.00 0.00 3.46
2734 3228 1.602323 GTTGTCATGTGGCGGGGAA 60.602 57.895 0.00 0.00 0.00 3.97
2735 3229 2.033448 GTTGTCATGTGGCGGGGA 59.967 61.111 0.00 0.00 0.00 4.81
2736 3230 3.061848 GGTTGTCATGTGGCGGGG 61.062 66.667 0.00 0.00 0.00 5.73
2737 3231 3.061848 GGGTTGTCATGTGGCGGG 61.062 66.667 0.00 0.00 0.00 6.13
2738 3232 3.061848 GGGGTTGTCATGTGGCGG 61.062 66.667 0.00 0.00 0.00 6.13
2739 3233 3.061848 GGGGGTTGTCATGTGGCG 61.062 66.667 0.00 0.00 0.00 5.69
2740 3234 1.532794 TTGGGGGTTGTCATGTGGC 60.533 57.895 0.00 0.00 0.00 5.01
2741 3235 1.184970 GGTTGGGGGTTGTCATGTGG 61.185 60.000 0.00 0.00 0.00 4.17
2742 3236 0.468958 TGGTTGGGGGTTGTCATGTG 60.469 55.000 0.00 0.00 0.00 3.21
2743 3237 0.263172 TTGGTTGGGGGTTGTCATGT 59.737 50.000 0.00 0.00 0.00 3.21
2744 3238 0.968405 CTTGGTTGGGGGTTGTCATG 59.032 55.000 0.00 0.00 0.00 3.07
2745 3239 0.178935 CCTTGGTTGGGGGTTGTCAT 60.179 55.000 0.00 0.00 0.00 3.06
2746 3240 1.231641 CCTTGGTTGGGGGTTGTCA 59.768 57.895 0.00 0.00 0.00 3.58
2747 3241 0.826256 GTCCTTGGTTGGGGGTTGTC 60.826 60.000 0.00 0.00 0.00 3.18
2748 3242 1.231928 GTCCTTGGTTGGGGGTTGT 59.768 57.895 0.00 0.00 0.00 3.32
2749 3243 1.112916 GTGTCCTTGGTTGGGGGTTG 61.113 60.000 0.00 0.00 0.00 3.77
2750 3244 1.231928 GTGTCCTTGGTTGGGGGTT 59.768 57.895 0.00 0.00 0.00 4.11
2751 3245 1.585651 TTGTGTCCTTGGTTGGGGGT 61.586 55.000 0.00 0.00 0.00 4.95
2752 3246 1.112916 GTTGTGTCCTTGGTTGGGGG 61.113 60.000 0.00 0.00 0.00 5.40
2753 3247 1.452145 CGTTGTGTCCTTGGTTGGGG 61.452 60.000 0.00 0.00 0.00 4.96
2754 3248 0.464735 TCGTTGTGTCCTTGGTTGGG 60.465 55.000 0.00 0.00 0.00 4.12
2755 3249 0.661020 GTCGTTGTGTCCTTGGTTGG 59.339 55.000 0.00 0.00 0.00 3.77
2756 3250 0.303493 CGTCGTTGTGTCCTTGGTTG 59.697 55.000 0.00 0.00 0.00 3.77
2757 3251 0.176219 TCGTCGTTGTGTCCTTGGTT 59.824 50.000 0.00 0.00 0.00 3.67
2758 3252 0.176219 TTCGTCGTTGTGTCCTTGGT 59.824 50.000 0.00 0.00 0.00 3.67
2759 3253 0.580104 GTTCGTCGTTGTGTCCTTGG 59.420 55.000 0.00 0.00 0.00 3.61
2760 3254 0.580104 GGTTCGTCGTTGTGTCCTTG 59.420 55.000 0.00 0.00 0.00 3.61
2761 3255 0.531311 GGGTTCGTCGTTGTGTCCTT 60.531 55.000 0.00 0.00 0.00 3.36
2762 3256 1.068585 GGGTTCGTCGTTGTGTCCT 59.931 57.895 0.00 0.00 0.00 3.85
2763 3257 1.219522 CTGGGTTCGTCGTTGTGTCC 61.220 60.000 0.00 0.00 0.00 4.02
2764 3258 0.529119 ACTGGGTTCGTCGTTGTGTC 60.529 55.000 0.00 0.00 0.00 3.67
2765 3259 0.529119 GACTGGGTTCGTCGTTGTGT 60.529 55.000 0.00 0.00 0.00 3.72
2766 3260 1.545614 CGACTGGGTTCGTCGTTGTG 61.546 60.000 4.57 0.00 46.56 3.33
2767 3261 1.299620 CGACTGGGTTCGTCGTTGT 60.300 57.895 4.57 0.00 46.56 3.32
2768 3262 3.534160 CGACTGGGTTCGTCGTTG 58.466 61.111 4.57 0.00 46.56 4.10
2772 3266 1.334243 CTAGATCCGACTGGGTTCGTC 59.666 57.143 0.00 0.00 39.17 4.20
2773 3267 1.064906 TCTAGATCCGACTGGGTTCGT 60.065 52.381 0.00 0.00 39.17 3.85
2774 3268 1.334243 GTCTAGATCCGACTGGGTTCG 59.666 57.143 0.00 0.00 39.17 3.95
2775 3269 1.334243 CGTCTAGATCCGACTGGGTTC 59.666 57.143 0.00 0.00 37.00 3.62
2776 3270 1.064906 TCGTCTAGATCCGACTGGGTT 60.065 52.381 0.00 0.00 37.00 4.11
2777 3271 0.545171 TCGTCTAGATCCGACTGGGT 59.455 55.000 0.00 0.00 37.00 4.51
2778 3272 1.604755 CTTCGTCTAGATCCGACTGGG 59.395 57.143 5.04 0.00 35.24 4.45
2779 3273 1.604755 CCTTCGTCTAGATCCGACTGG 59.395 57.143 5.04 7.12 31.95 4.00
2780 3274 1.002251 GCCTTCGTCTAGATCCGACTG 60.002 57.143 5.04 1.78 31.95 3.51
2781 3275 1.134037 AGCCTTCGTCTAGATCCGACT 60.134 52.381 5.04 0.00 31.95 4.18
2782 3276 1.264826 GAGCCTTCGTCTAGATCCGAC 59.735 57.143 5.04 3.32 31.95 4.79
2783 3277 1.134189 TGAGCCTTCGTCTAGATCCGA 60.134 52.381 0.00 0.00 0.00 4.55
2784 3278 1.002251 GTGAGCCTTCGTCTAGATCCG 60.002 57.143 0.00 0.00 0.00 4.18
2785 3279 1.338655 GGTGAGCCTTCGTCTAGATCC 59.661 57.143 0.00 0.00 0.00 3.36
2786 3280 1.338655 GGGTGAGCCTTCGTCTAGATC 59.661 57.143 0.00 0.00 34.45 2.75
2787 3281 1.342076 TGGGTGAGCCTTCGTCTAGAT 60.342 52.381 1.06 0.00 34.45 1.98
2788 3282 0.039180 TGGGTGAGCCTTCGTCTAGA 59.961 55.000 1.06 0.00 34.45 2.43
2789 3283 0.895530 TTGGGTGAGCCTTCGTCTAG 59.104 55.000 1.06 0.00 34.45 2.43
2790 3284 0.606604 GTTGGGTGAGCCTTCGTCTA 59.393 55.000 1.06 0.00 34.45 2.59
2791 3285 1.371558 GTTGGGTGAGCCTTCGTCT 59.628 57.895 1.06 0.00 34.45 4.18
2792 3286 1.671379 GGTTGGGTGAGCCTTCGTC 60.671 63.158 1.06 0.00 34.45 4.20
2793 3287 2.430367 GGTTGGGTGAGCCTTCGT 59.570 61.111 1.06 0.00 34.45 3.85
2794 3288 2.359975 GGGTTGGGTGAGCCTTCG 60.360 66.667 1.06 0.00 34.37 3.79
2795 3289 1.152830 TTGGGTTGGGTGAGCCTTC 59.847 57.895 1.06 0.00 38.04 3.46
2796 3290 1.152546 GTTGGGTTGGGTGAGCCTT 60.153 57.895 1.06 0.00 38.04 4.35
2797 3291 2.520968 GTTGGGTTGGGTGAGCCT 59.479 61.111 1.06 0.00 38.04 4.58
2798 3292 2.983592 CGTTGGGTTGGGTGAGCC 60.984 66.667 0.00 0.00 37.70 4.70
2799 3293 2.983592 CCGTTGGGTTGGGTGAGC 60.984 66.667 0.00 0.00 0.00 4.26
2800 3294 2.983592 GCCGTTGGGTTGGGTGAG 60.984 66.667 0.00 0.00 34.97 3.51
2801 3295 4.589675 GGCCGTTGGGTTGGGTGA 62.590 66.667 0.00 0.00 34.97 4.02
2802 3296 4.904590 TGGCCGTTGGGTTGGGTG 62.905 66.667 0.00 0.00 34.97 4.61
2803 3297 4.906537 GTGGCCGTTGGGTTGGGT 62.907 66.667 0.00 0.00 34.97 4.51
2805 3299 4.939368 TCGTGGCCGTTGGGTTGG 62.939 66.667 0.00 0.00 34.97 3.77
2806 3300 3.353836 CTCGTGGCCGTTGGGTTG 61.354 66.667 0.00 0.00 34.97 3.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.