Multiple sequence alignment - TraesCS4D01G091500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G091500 chr4D 100.000 5928 0 0 3573 9500 66511228 66517155 0.000000e+00 10948.0
1 TraesCS4D01G091500 chr4D 100.000 3211 0 0 1 3211 66507656 66510866 0.000000e+00 5930.0
2 TraesCS4D01G091500 chr4D 89.709 1098 70 20 1501 2567 35145236 35144151 0.000000e+00 1362.0
3 TraesCS4D01G091500 chr4D 89.760 957 78 15 1500 2450 480046910 480047852 0.000000e+00 1206.0
4 TraesCS4D01G091500 chr4D 93.658 473 21 6 3576 4047 35141486 35141022 0.000000e+00 699.0
5 TraesCS4D01G091500 chr4D 90.217 276 10 8 1 260 28419961 28420235 2.540000e-90 344.0
6 TraesCS4D01G091500 chr4D 88.930 271 19 7 1 262 23234848 23235116 3.310000e-84 324.0
7 TraesCS4D01G091500 chr4D 87.097 279 15 11 1 262 125094827 125095101 7.210000e-76 296.0
8 TraesCS4D01G091500 chr4D 89.796 147 7 3 1501 1647 35141160 35141022 2.110000e-41 182.0
9 TraesCS4D01G091500 chr4D 84.967 153 21 2 9256 9407 380282109 380281958 4.590000e-33 154.0
10 TraesCS4D01G091500 chr4D 89.744 117 11 1 8802 8917 401123582 401123466 2.140000e-31 148.0
11 TraesCS4D01G091500 chr4D 87.597 129 13 3 8799 8925 440586722 440586849 7.690000e-31 147.0
12 TraesCS4D01G091500 chr4D 95.402 87 4 0 8538 8624 7759881 7759967 1.290000e-28 139.0
13 TraesCS4D01G091500 chr4D 94.382 89 5 0 8540 8628 380252190 380252278 4.630000e-28 137.0
14 TraesCS4D01G091500 chr4D 93.407 91 6 0 8534 8624 453135402 453135312 1.660000e-27 135.0
15 TraesCS4D01G091500 chr4D 91.667 96 8 0 8534 8629 124628764 124628859 5.990000e-27 134.0
16 TraesCS4D01G091500 chr4D 83.704 135 22 0 7297 7431 366045676 366045810 2.780000e-25 128.0
17 TraesCS4D01G091500 chr4D 81.325 166 21 9 1501 1664 86773533 86773690 1.000000e-24 126.0
18 TraesCS4D01G091500 chr4A 95.746 4537 128 28 4062 8541 515462359 515466887 0.000000e+00 7249.0
19 TraesCS4D01G091500 chr4A 92.746 896 34 12 626 1499 515461479 515462365 0.000000e+00 1266.0
20 TraesCS4D01G091500 chr4A 93.103 261 17 1 1 260 620424886 620424626 1.940000e-101 381.0
21 TraesCS4D01G091500 chr4A 94.022 184 10 1 8621 8803 515466884 515467067 2.610000e-70 278.0
22 TraesCS4D01G091500 chr4A 94.737 114 5 1 8802 8915 1520075 1519963 9.810000e-40 176.0
23 TraesCS4D01G091500 chr4A 86.897 145 15 4 308 450 595297966 595297824 9.870000e-35 159.0
24 TraesCS4D01G091500 chr4A 89.091 110 9 3 8540 8647 597739966 597739858 5.990000e-27 134.0
25 TraesCS4D01G091500 chr4A 82.812 128 18 4 436 560 718791111 718790985 2.800000e-20 111.0
26 TraesCS4D01G091500 chr4A 82.787 122 20 1 436 557 221511584 221511464 3.630000e-19 108.0
27 TraesCS4D01G091500 chr4B 95.348 2515 72 16 5138 7645 97072388 97074864 0.000000e+00 3954.0
28 TraesCS4D01G091500 chr4B 88.224 1554 147 23 1501 3035 606751439 606752975 0.000000e+00 1823.0
29 TraesCS4D01G091500 chr4B 96.508 945 25 6 4201 5140 97071366 97072307 0.000000e+00 1555.0
30 TraesCS4D01G091500 chr4B 92.802 1028 49 10 7528 8541 97074860 97075876 0.000000e+00 1465.0
31 TraesCS4D01G091500 chr4B 89.764 762 31 14 760 1500 97070392 97071127 0.000000e+00 931.0
32 TraesCS4D01G091500 chr4B 89.713 661 45 10 7880 8529 129101331 129101979 0.000000e+00 822.0
33 TraesCS4D01G091500 chr4B 94.322 317 17 1 7327 7642 129052335 129052651 1.430000e-132 484.0
34 TraesCS4D01G091500 chr4B 90.566 318 23 7 8908 9219 129103983 129104299 1.910000e-111 414.0
35 TraesCS4D01G091500 chr4B 94.737 247 12 1 9254 9500 129104292 129104537 5.380000e-102 383.0
36 TraesCS4D01G091500 chr4B 92.896 183 13 0 8621 8803 129103802 129103984 5.660000e-67 267.0
37 TraesCS4D01G091500 chr4B 92.473 186 13 1 7674 7859 129056766 129056950 2.030000e-66 265.0
38 TraesCS4D01G091500 chr4B 94.928 138 7 0 4062 4199 97071120 97071257 5.780000e-52 217.0
39 TraesCS4D01G091500 chr4B 87.413 143 16 1 9254 9394 467460656 467460514 7.630000e-36 163.0
40 TraesCS4D01G091500 chr4B 91.304 115 9 1 8799 8912 621807 621921 1.280000e-33 156.0
41 TraesCS4D01G091500 chr4B 92.593 108 8 0 8802 8909 597139099 597139206 1.280000e-33 156.0
42 TraesCS4D01G091500 chr4B 91.667 108 9 0 8802 8909 42209387 42209494 5.940000e-32 150.0
43 TraesCS4D01G091500 chr4B 82.123 179 28 3 7297 7473 175308604 175308428 5.940000e-32 150.0
44 TraesCS4D01G091500 chr4B 81.818 187 21 6 323 507 546675242 546675067 2.770000e-30 145.0
45 TraesCS4D01G091500 chr4B 85.385 130 16 3 323 450 15264246 15264118 2.150000e-26 132.0
46 TraesCS4D01G091500 chr4B 90.722 97 9 0 8531 8627 23660877 23660781 7.740000e-26 130.0
47 TraesCS4D01G091500 chr4B 81.935 155 20 2 9254 9406 240193089 240192941 3.600000e-24 124.0
48 TraesCS4D01G091500 chr4B 95.918 49 2 0 8624 8672 97075873 97075921 7.910000e-11 80.5
49 TraesCS4D01G091500 chr2A 88.968 1550 137 23 1501 3035 769339236 769337706 0.000000e+00 1884.0
50 TraesCS4D01G091500 chr2A 90.787 1270 90 18 1501 2762 16572047 16570797 0.000000e+00 1672.0
51 TraesCS4D01G091500 chr2A 88.050 159 16 2 9254 9410 62388194 62388037 1.630000e-42 185.0
52 TraesCS4D01G091500 chr2A 93.966 116 7 0 8801 8916 73898435 73898550 9.810000e-40 176.0
53 TraesCS4D01G091500 chr2A 92.562 121 9 0 8797 8917 745015544 745015424 3.530000e-39 174.0
54 TraesCS4D01G091500 chr2A 84.058 138 22 0 7297 7434 381732139 381732002 5.990000e-27 134.0
55 TraesCS4D01G091500 chrUn 90.787 1270 90 18 1501 2762 282690421 282689171 0.000000e+00 1672.0
56 TraesCS4D01G091500 chrUn 86.869 99 8 4 9005 9099 225031725 225031628 1.300000e-18 106.0
57 TraesCS4D01G091500 chr5D 90.078 1290 108 12 1501 2781 509591373 509592651 0.000000e+00 1655.0
58 TraesCS4D01G091500 chr5D 93.075 491 30 1 3574 4064 511614017 511614503 0.000000e+00 715.0
59 TraesCS4D01G091500 chr5D 93.916 263 13 2 1 262 489733169 489732909 2.490000e-105 394.0
60 TraesCS4D01G091500 chr5D 90.875 263 21 2 1 262 69410160 69410420 5.460000e-92 350.0
61 TraesCS4D01G091500 chr5D 94.581 203 11 0 64 266 543593605 543593403 1.990000e-81 315.0
62 TraesCS4D01G091500 chr5D 95.370 108 5 0 8802 8909 70640484 70640591 1.270000e-38 172.0
63 TraesCS4D01G091500 chr5D 95.455 88 4 0 8540 8627 109535624 109535537 3.580000e-29 141.0
64 TraesCS4D01G091500 chr5D 95.455 88 4 0 8540 8627 112843010 112842923 3.580000e-29 141.0
65 TraesCS4D01G091500 chr5D 92.708 96 5 2 8533 8627 431293830 431293736 4.630000e-28 137.0
66 TraesCS4D01G091500 chr5D 81.250 96 15 3 9100 9194 128577585 128577492 3.680000e-09 75.0
67 TraesCS4D01G091500 chr1D 89.845 1290 112 13 1499 2781 465001317 465000040 0.000000e+00 1639.0
68 TraesCS4D01G091500 chr1D 95.987 947 28 4 1502 2448 366479310 366478374 0.000000e+00 1530.0
69 TraesCS4D01G091500 chr1D 91.542 934 59 11 1498 2430 457163109 457164023 0.000000e+00 1269.0
70 TraesCS4D01G091500 chr1D 92.276 492 31 4 3574 4065 464999302 464998818 0.000000e+00 691.0
71 TraesCS4D01G091500 chr1D 95.019 261 11 2 1 260 349189462 349189203 8.880000e-110 409.0
72 TraesCS4D01G091500 chr1D 92.692 260 12 3 1 260 259769697 259769445 1.510000e-97 368.0
73 TraesCS4D01G091500 chr1D 90.580 276 10 7 1 260 425566539 425566814 1.520000e-92 351.0
74 TraesCS4D01G091500 chr1D 89.493 276 13 7 1 260 432633191 432632916 1.530000e-87 335.0
75 TraesCS4D01G091500 chr1D 88.550 262 27 3 1 260 9004672 9004412 1.990000e-81 315.0
76 TraesCS4D01G091500 chr1D 96.757 185 6 0 76 260 334055201 334055385 9.270000e-80 309.0
77 TraesCS4D01G091500 chr1D 88.816 152 13 2 9246 9394 338927318 338927168 5.860000e-42 183.0
78 TraesCS4D01G091500 chr1D 95.455 110 5 0 8802 8911 459859039 459859148 9.810000e-40 176.0
79 TraesCS4D01G091500 chr1D 86.301 146 18 2 9263 9406 365984595 365984740 3.550000e-34 158.0
80 TraesCS4D01G091500 chr1D 91.071 112 10 0 8799 8910 349256348 349256237 1.650000e-32 152.0
81 TraesCS4D01G091500 chr1D 91.667 108 9 0 8802 8909 494667490 494667597 5.940000e-32 150.0
82 TraesCS4D01G091500 chr1D 88.000 125 12 3 8802 8924 91999879 91999756 2.770000e-30 145.0
83 TraesCS4D01G091500 chr1D 95.506 89 1 3 1501 1589 12990982 12991067 1.290000e-28 139.0
84 TraesCS4D01G091500 chr1D 95.349 86 4 0 8540 8625 337065189 337065274 4.630000e-28 137.0
85 TraesCS4D01G091500 chr1D 82.353 153 24 3 9254 9403 470222577 470222425 7.740000e-26 130.0
86 TraesCS4D01G091500 chr1D 83.099 142 20 3 9256 9393 164483856 164483997 1.000000e-24 126.0
87 TraesCS4D01G091500 chr1D 96.053 76 3 0 1501 1576 366477889 366477814 3.600000e-24 124.0
88 TraesCS4D01G091500 chr1D 85.217 115 16 1 9106 9219 468969198 468969084 6.030000e-22 117.0
89 TraesCS4D01G091500 chr2D 89.698 1291 105 18 1501 2781 182380728 182382000 0.000000e+00 1622.0
90 TraesCS4D01G091500 chr2D 91.463 1148 66 15 1498 2642 568132656 568133774 0.000000e+00 1548.0
91 TraesCS4D01G091500 chr2D 94.184 619 30 5 2596 3211 200257273 200256658 0.000000e+00 939.0
92 TraesCS4D01G091500 chr2D 90.877 570 47 4 2596 3162 621745842 621745275 0.000000e+00 760.0
93 TraesCS4D01G091500 chr2D 93.333 480 25 4 3574 4051 69491484 69491010 0.000000e+00 702.0
94 TraesCS4D01G091500 chr2D 92.000 500 26 8 3573 4065 200256664 200256172 0.000000e+00 689.0
95 TraesCS4D01G091500 chr2D 91.919 495 30 4 3574 4064 453602525 453602037 0.000000e+00 684.0
96 TraesCS4D01G091500 chr2D 93.870 261 14 2 1 260 57331837 57332096 8.940000e-105 392.0
97 TraesCS4D01G091500 chr2D 94.466 253 9 2 9 260 567018084 567017836 1.500000e-102 385.0
98 TraesCS4D01G091500 chr2D 85.532 235 24 9 332 560 72575852 72575622 4.430000e-58 237.0
99 TraesCS4D01G091500 chr2D 91.463 164 8 1 1501 1664 568135146 568135303 4.470000e-53 220.0
100 TraesCS4D01G091500 chr2D 89.241 158 15 2 9254 9410 62063096 62062940 7.530000e-46 196.0
101 TraesCS4D01G091500 chr2D 95.536 112 5 0 8802 8913 637342566 637342677 7.580000e-41 180.0
102 TraesCS4D01G091500 chr2D 89.855 138 12 2 310 447 261169470 261169335 9.810000e-40 176.0
103 TraesCS4D01G091500 chr2D 89.362 141 12 3 308 447 328796250 328796388 3.530000e-39 174.0
104 TraesCS4D01G091500 chr2D 93.750 112 7 0 8798 8909 542514784 542514673 1.640000e-37 169.0
105 TraesCS4D01G091500 chr2D 88.028 142 13 4 307 447 108768094 108768232 2.120000e-36 165.0
106 TraesCS4D01G091500 chr2D 89.922 129 12 1 8790 8917 449699321 449699449 2.120000e-36 165.0
107 TraesCS4D01G091500 chr2D 85.906 149 13 7 302 447 75563921 75563778 1.650000e-32 152.0
108 TraesCS4D01G091500 chr2D 92.929 99 5 2 8528 8626 622355877 622355973 9.940000e-30 143.0
109 TraesCS4D01G091500 chr3A 90.299 1237 103 11 1501 2733 712387069 712388292 0.000000e+00 1604.0
110 TraesCS4D01G091500 chr3A 96.169 261 9 1 1 260 642030142 642030402 8.820000e-115 425.0
111 TraesCS4D01G091500 chr3A 90.071 141 11 3 308 447 21063342 21063204 7.580000e-41 180.0
112 TraesCS4D01G091500 chr7D 89.233 1291 118 14 1501 2781 433805496 433806775 0.000000e+00 1594.0
113 TraesCS4D01G091500 chr7D 88.942 624 60 8 2582 3204 402575267 402575882 0.000000e+00 761.0
114 TraesCS4D01G091500 chr7D 93.075 491 30 1 3574 4064 433807508 433807994 0.000000e+00 715.0
115 TraesCS4D01G091500 chr7D 92.668 491 32 1 3574 4064 598590475 598589989 0.000000e+00 704.0
116 TraesCS4D01G091500 chr7D 96.198 263 8 2 1 262 136876654 136876915 6.820000e-116 429.0
117 TraesCS4D01G091500 chr7D 92.830 265 15 3 1 264 630614290 630614551 1.940000e-101 381.0
118 TraesCS4D01G091500 chr7D 91.923 260 14 4 1 260 549407325 549407577 3.260000e-94 357.0
119 TraesCS4D01G091500 chr7D 89.241 158 15 2 9254 9409 199607030 199606873 7.530000e-46 196.0
120 TraesCS4D01G091500 chr7D 91.608 143 10 2 9254 9394 485106566 485106708 7.530000e-46 196.0
121 TraesCS4D01G091500 chr7D 88.387 155 16 1 9254 9406 194080820 194080974 1.630000e-42 185.0
122 TraesCS4D01G091500 chr7D 95.413 109 5 0 8801 8909 621738348 621738240 3.530000e-39 174.0
123 TraesCS4D01G091500 chr7D 85.926 135 19 0 7297 7431 311619186 311619320 2.770000e-30 145.0
124 TraesCS4D01G091500 chr7D 92.708 96 6 1 8532 8627 519264539 519264633 4.630000e-28 137.0
125 TraesCS4D01G091500 chr7D 91.837 98 7 1 8530 8627 93543012 93543108 1.660000e-27 135.0
126 TraesCS4D01G091500 chr7D 91.837 98 7 1 8530 8627 426558890 426558986 1.660000e-27 135.0
127 TraesCS4D01G091500 chr7D 91.579 95 8 0 8540 8634 485090962 485090868 2.150000e-26 132.0
128 TraesCS4D01G091500 chr7D 85.075 134 13 6 316 447 129975457 129975585 7.740000e-26 130.0
129 TraesCS4D01G091500 chr7B 89.491 1199 82 19 1498 2665 364209444 364208259 0.000000e+00 1476.0
130 TraesCS4D01G091500 chr7B 85.306 245 29 4 316 560 181357515 181357278 7.370000e-61 246.0
131 TraesCS4D01G091500 chr7B 89.571 163 14 3 9254 9413 540063305 540063467 4.500000e-48 204.0
132 TraesCS4D01G091500 chr7B 89.610 154 15 1 9254 9406 157803082 157803235 2.710000e-45 195.0
133 TraesCS4D01G091500 chr6A 85.505 1090 128 16 2099 3162 44849351 44848266 0.000000e+00 1110.0
134 TraesCS4D01G091500 chr6A 91.209 273 8 7 6 262 286335698 286335426 3.260000e-94 357.0
135 TraesCS4D01G091500 chr6A 88.129 278 17 7 1 262 170015927 170015650 5.540000e-82 316.0
136 TraesCS4D01G091500 chr6A 82.510 263 33 9 1 260 569598436 569598688 1.610000e-52 219.0
137 TraesCS4D01G091500 chr6A 89.209 139 11 4 311 447 158312358 158312222 4.560000e-38 171.0
138 TraesCS4D01G091500 chr6A 94.444 108 6 0 8802 8909 64543068 64543175 5.900000e-37 167.0
139 TraesCS4D01G091500 chr6A 92.857 112 8 0 8798 8909 84047076 84047187 7.630000e-36 163.0
140 TraesCS4D01G091500 chr6A 92.920 113 7 1 8801 8912 594523792 594523904 7.630000e-36 163.0
141 TraesCS4D01G091500 chr6A 93.519 108 7 0 8802 8909 33557371 33557478 2.750000e-35 161.0
142 TraesCS4D01G091500 chr6A 92.793 111 8 0 8802 8912 616741159 616741049 2.750000e-35 161.0
143 TraesCS4D01G091500 chr6A 87.324 142 15 3 308 447 158433896 158433756 9.870000e-35 159.0
144 TraesCS4D01G091500 chr6A 84.028 144 17 4 9254 9394 52485888 52486028 5.990000e-27 134.0
145 TraesCS4D01G091500 chr6A 84.426 122 19 0 439 560 580957459 580957338 4.660000e-23 121.0
146 TraesCS4D01G091500 chr3D 94.355 620 28 6 2596 3211 134842779 134843395 0.000000e+00 944.0
147 TraesCS4D01G091500 chr3D 86.792 159 18 3 9248 9406 19063492 19063647 3.530000e-39 174.0
148 TraesCS4D01G091500 chr3D 94.444 108 6 0 8802 8909 560754718 560754611 5.900000e-37 167.0
149 TraesCS4D01G091500 chr3D 90.476 126 10 2 8783 8908 695456 695333 2.120000e-36 165.0
150 TraesCS4D01G091500 chr3D 86.620 142 17 2 9254 9394 50537893 50538033 1.280000e-33 156.0
151 TraesCS4D01G091500 chr3D 92.035 113 6 2 306 415 552786440 552786328 1.280000e-33 156.0
152 TraesCS4D01G091500 chr3D 92.079 101 7 1 8537 8636 180394995 180394895 3.580000e-29 141.0
153 TraesCS4D01G091500 chr3D 93.617 94 6 0 8532 8625 411724437 411724344 3.580000e-29 141.0
154 TraesCS4D01G091500 chr3D 89.623 106 9 2 8525 8629 189003968 189004072 5.990000e-27 134.0
155 TraesCS4D01G091500 chr3D 91.753 97 7 1 8530 8626 570848659 570848754 5.990000e-27 134.0
156 TraesCS4D01G091500 chr3D 90.909 99 9 0 8529 8627 609606527 609606429 5.990000e-27 134.0
157 TraesCS4D01G091500 chr3D 77.305 141 24 7 308 447 297469484 297469351 1.020000e-09 76.8
158 TraesCS4D01G091500 chr6D 93.689 618 34 4 2596 3211 41188616 41188002 0.000000e+00 920.0
159 TraesCS4D01G091500 chr6D 92.901 493 32 2 3574 4064 266369735 266369244 0.000000e+00 713.0
160 TraesCS4D01G091500 chr6D 91.304 276 8 7 1 260 10676302 10676577 7.010000e-96 363.0
161 TraesCS4D01G091500 chr6D 90.000 270 10 8 9 262 386157089 386156821 5.500000e-87 333.0
162 TraesCS4D01G091500 chr6D 88.768 276 15 7 1 260 420557075 420556800 3.310000e-84 324.0
163 TraesCS4D01G091500 chr6D 88.768 276 14 7 1 260 455521162 455521436 1.190000e-83 322.0
164 TraesCS4D01G091500 chr6D 88.476 269 26 5 1 268 110654409 110654145 4.280000e-83 320.0
165 TraesCS4D01G091500 chr6D 87.050 278 20 5 1 262 24574935 24575212 5.580000e-77 300.0
166 TraesCS4D01G091500 chr6D 87.273 275 17 9 1 260 223932985 223932714 2.010000e-76 298.0
167 TraesCS4D01G091500 chr6D 84.532 278 23 12 1 262 444085330 444085057 3.400000e-64 257.0
168 TraesCS4D01G091500 chr6D 95.283 106 5 0 8799 8904 230814354 230814459 1.640000e-37 169.0
169 TraesCS4D01G091500 chr6D 89.831 118 10 2 8802 8917 79012276 79012159 5.940000e-32 150.0
170 TraesCS4D01G091500 chr6D 91.667 108 9 0 8802 8909 379823796 379823903 5.940000e-32 150.0
171 TraesCS4D01G091500 chr6D 90.826 109 10 0 8802 8910 38219553 38219661 7.690000e-31 147.0
172 TraesCS4D01G091500 chr6D 90.826 109 10 0 8801 8909 364899933 364900041 7.690000e-31 147.0
173 TraesCS4D01G091500 chr6D 88.000 125 12 3 8802 8924 25100783 25100660 2.770000e-30 145.0
174 TraesCS4D01G091500 chr6D 90.741 108 10 0 8802 8909 49248239 49248346 2.770000e-30 145.0
175 TraesCS4D01G091500 chr6D 90.741 108 10 0 8802 8909 92288020 92288127 2.770000e-30 145.0
176 TraesCS4D01G091500 chr6D 88.983 118 11 2 8802 8917 99914672 99914555 2.770000e-30 145.0
177 TraesCS4D01G091500 chr6D 90.741 108 10 0 8802 8909 112516282 112516389 2.770000e-30 145.0
178 TraesCS4D01G091500 chr6D 90.741 108 10 0 8802 8909 115361107 115361214 2.770000e-30 145.0
179 TraesCS4D01G091500 chr6D 93.548 93 6 0 8537 8629 85081781 85081873 1.290000e-28 139.0
180 TraesCS4D01G091500 chr6D 91.346 104 6 3 8521 8624 168293739 168293839 1.290000e-28 139.0
181 TraesCS4D01G091500 chr6D 94.318 88 5 0 8537 8624 363038075 363038162 1.660000e-27 135.0
182 TraesCS4D01G091500 chr6D 90.291 103 8 2 8529 8630 455101324 455101223 5.990000e-27 134.0
183 TraesCS4D01G091500 chr6D 88.496 113 8 4 9254 9362 38840715 38840826 2.150000e-26 132.0
184 TraesCS4D01G091500 chr6D 94.118 85 5 0 8540 8624 309072504 309072588 7.740000e-26 130.0
185 TraesCS4D01G091500 chr6D 94.118 85 5 0 8540 8624 316232381 316232297 7.740000e-26 130.0
186 TraesCS4D01G091500 chr6D 93.103 87 6 0 8540 8626 78083079 78083165 2.780000e-25 128.0
187 TraesCS4D01G091500 chr6D 94.118 85 4 1 8540 8624 145788546 145788463 2.780000e-25 128.0
188 TraesCS4D01G091500 chr6D 91.398 93 8 0 8532 8624 146072815 146072907 2.780000e-25 128.0
189 TraesCS4D01G091500 chr6D 89.899 99 7 3 8531 8628 81394282 81394186 3.600000e-24 124.0
190 TraesCS4D01G091500 chr6D 89.109 101 10 1 8536 8636 456406460 456406361 3.600000e-24 124.0
191 TraesCS4D01G091500 chr6D 83.704 135 16 3 9264 9393 288219810 288219677 1.300000e-23 122.0
192 TraesCS4D01G091500 chr6D 77.273 198 40 3 67 262 36565478 36565284 2.800000e-20 111.0
193 TraesCS4D01G091500 chr6D 80.000 85 14 2 9322 9405 60549174 60549092 1.030000e-04 60.2
194 TraesCS4D01G091500 chr6D 85.000 60 4 3 392 447 104990555 104990497 1.000000e-03 56.5
195 TraesCS4D01G091500 chr6D 100.000 28 0 0 235 262 27706063 27706090 1.700000e-02 52.8
196 TraesCS4D01G091500 chr3B 88.084 621 65 6 2587 3204 535706831 535707445 0.000000e+00 728.0
197 TraesCS4D01G091500 chr3B 96.639 119 2 2 8796 8914 452976971 452977087 7.530000e-46 196.0
198 TraesCS4D01G091500 chr5B 84.219 602 67 19 1501 2096 424144631 424145210 2.320000e-155 560.0
199 TraesCS4D01G091500 chr5B 97.321 112 3 0 8801 8912 36727555 36727666 3.500000e-44 191.0
200 TraesCS4D01G091500 chr5B 94.828 116 5 1 8802 8917 622393445 622393559 7.580000e-41 180.0
201 TraesCS4D01G091500 chr5B 86.452 155 18 3 9254 9406 527760514 527760361 5.900000e-37 167.0
202 TraesCS4D01G091500 chr5B 85.430 151 18 4 299 447 490296690 490296542 4.590000e-33 154.0
203 TraesCS4D01G091500 chr5B 81.564 179 29 3 7297 7473 209633676 209633500 2.770000e-30 145.0
204 TraesCS4D01G091500 chr7A 92.776 263 15 2 1 262 663176394 663176135 2.500000e-100 377.0
205 TraesCS4D01G091500 chr7A 88.000 150 15 3 299 447 34052331 34052478 3.530000e-39 174.0
206 TraesCS4D01G091500 chr7A 87.162 148 16 3 302 447 733445493 733445639 2.120000e-36 165.0
207 TraesCS4D01G091500 chr7A 80.645 124 19 5 9096 9216 624928105 624927984 3.650000e-14 91.6
208 TraesCS4D01G091500 chr7A 83.951 81 13 0 9101 9181 535468307 535468387 2.840000e-10 78.7
209 TraesCS4D01G091500 chr5A 91.954 261 20 1 1 260 665886915 665887175 1.950000e-96 364.0
210 TraesCS4D01G091500 chr5A 94.958 119 6 0 8796 8914 688927659 688927541 4.530000e-43 187.0
211 TraesCS4D01G091500 chr5A 83.704 135 22 0 7297 7431 216692204 216692338 2.780000e-25 128.0
212 TraesCS4D01G091500 chr5A 80.909 110 18 3 9100 9207 143576175 143576067 6.110000e-12 84.2
213 TraesCS4D01G091500 chr1A 89.888 267 20 2 1 260 521327281 521327015 4.250000e-88 337.0
214 TraesCS4D01G091500 chr1A 94.690 113 6 0 8799 8911 24340421 24340309 9.810000e-40 176.0
215 TraesCS4D01G091500 chr1A 93.333 120 6 2 8799 8916 489169902 489169783 9.810000e-40 176.0
216 TraesCS4D01G091500 chr1A 93.966 116 5 2 8802 8916 384334555 384334441 3.530000e-39 174.0
217 TraesCS4D01G091500 chr1A 86.364 154 20 1 9254 9407 108760412 108760260 5.900000e-37 167.0
218 TraesCS4D01G091500 chr1A 85.714 154 20 2 9254 9406 511603319 511603167 2.750000e-35 161.0
219 TraesCS4D01G091500 chr2B 89.759 166 13 4 9244 9406 24241891 24242055 9.670000e-50 209.0
220 TraesCS4D01G091500 chr2B 88.024 167 17 2 9244 9410 97435795 97435632 2.710000e-45 195.0
221 TraesCS4D01G091500 chr2B 97.345 113 3 0 8799 8911 213374515 213374627 9.740000e-45 193.0
222 TraesCS4D01G091500 chr2B 95.652 115 4 1 8799 8913 76928530 76928417 5.860000e-42 183.0
223 TraesCS4D01G091500 chr2B 88.028 142 14 3 307 447 69660132 69659993 2.120000e-36 165.0
224 TraesCS4D01G091500 chr1B 88.356 146 14 2 9252 9394 453507473 453507328 1.270000e-38 172.0
225 TraesCS4D01G091500 chr1B 83.333 114 16 3 9106 9219 810272 810382 1.690000e-17 102.0
226 TraesCS4D01G091500 chr1B 85.057 87 13 0 9105 9191 305541988 305541902 1.310000e-13 89.8
227 TraesCS4D01G091500 chr6B 90.152 132 7 4 1501 1628 139286996 139286867 5.900000e-37 167.0
228 TraesCS4D01G091500 chr6B 92.708 96 7 0 8536 8631 216509846 216509751 1.290000e-28 139.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G091500 chr4D 66507656 66517155 9499 False 8439.000000 10948 100.000000 1 9500 2 chr4D.!!$F11 9499
1 TraesCS4D01G091500 chr4D 480046910 480047852 942 False 1206.000000 1206 89.760000 1500 2450 1 chr4D.!!$F10 950
2 TraesCS4D01G091500 chr4D 35141022 35145236 4214 True 747.666667 1362 91.054333 1501 4047 3 chr4D.!!$R4 2546
3 TraesCS4D01G091500 chr4A 515461479 515467067 5588 False 2931.000000 7249 94.171333 626 8803 3 chr4A.!!$F1 8177
4 TraesCS4D01G091500 chr4B 606751439 606752975 1536 False 1823.000000 1823 88.224000 1501 3035 1 chr4B.!!$F6 1534
5 TraesCS4D01G091500 chr4B 97070392 97075921 5529 False 1367.083333 3954 94.211333 760 8672 6 chr4B.!!$F7 7912
6 TraesCS4D01G091500 chr4B 129101331 129104537 3206 False 471.500000 822 91.978000 7880 9500 4 chr4B.!!$F8 1620
7 TraesCS4D01G091500 chr2A 769337706 769339236 1530 True 1884.000000 1884 88.968000 1501 3035 1 chr2A.!!$R5 1534
8 TraesCS4D01G091500 chr2A 16570797 16572047 1250 True 1672.000000 1672 90.787000 1501 2762 1 chr2A.!!$R1 1261
9 TraesCS4D01G091500 chrUn 282689171 282690421 1250 True 1672.000000 1672 90.787000 1501 2762 1 chrUn.!!$R2 1261
10 TraesCS4D01G091500 chr5D 509591373 509592651 1278 False 1655.000000 1655 90.078000 1501 2781 1 chr5D.!!$F3 1280
11 TraesCS4D01G091500 chr1D 457163109 457164023 914 False 1269.000000 1269 91.542000 1498 2430 1 chr1D.!!$F7 932
12 TraesCS4D01G091500 chr1D 464998818 465001317 2499 True 1165.000000 1639 91.060500 1499 4065 2 chr1D.!!$R11 2566
13 TraesCS4D01G091500 chr1D 366477814 366479310 1496 True 827.000000 1530 96.020000 1501 2448 2 chr1D.!!$R10 947
14 TraesCS4D01G091500 chr2D 182380728 182382000 1272 False 1622.000000 1622 89.698000 1501 2781 1 chr2D.!!$F3 1280
15 TraesCS4D01G091500 chr2D 568132656 568135303 2647 False 884.000000 1548 91.463000 1498 2642 2 chr2D.!!$F8 1144
16 TraesCS4D01G091500 chr2D 200256172 200257273 1101 True 814.000000 939 93.092000 2596 4065 2 chr2D.!!$R10 1469
17 TraesCS4D01G091500 chr2D 621745275 621745842 567 True 760.000000 760 90.877000 2596 3162 1 chr2D.!!$R9 566
18 TraesCS4D01G091500 chr3A 712387069 712388292 1223 False 1604.000000 1604 90.299000 1501 2733 1 chr3A.!!$F2 1232
19 TraesCS4D01G091500 chr7D 433805496 433807994 2498 False 1154.500000 1594 91.154000 1501 4064 2 chr7D.!!$F12 2563
20 TraesCS4D01G091500 chr7D 402575267 402575882 615 False 761.000000 761 88.942000 2582 3204 1 chr7D.!!$F6 622
21 TraesCS4D01G091500 chr7B 364208259 364209444 1185 True 1476.000000 1476 89.491000 1498 2665 1 chr7B.!!$R2 1167
22 TraesCS4D01G091500 chr6A 44848266 44849351 1085 True 1110.000000 1110 85.505000 2099 3162 1 chr6A.!!$R1 1063
23 TraesCS4D01G091500 chr3D 134842779 134843395 616 False 944.000000 944 94.355000 2596 3211 1 chr3D.!!$F3 615
24 TraesCS4D01G091500 chr6D 41188002 41188616 614 True 920.000000 920 93.689000 2596 3211 1 chr6D.!!$R3 615
25 TraesCS4D01G091500 chr3B 535706831 535707445 614 False 728.000000 728 88.084000 2587 3204 1 chr3B.!!$F2 617
26 TraesCS4D01G091500 chr5B 424144631 424145210 579 False 560.000000 560 84.219000 1501 2096 1 chr5B.!!$F2 595

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
103 104 0.026803 GAGCGGACGCAGCAAATAAG 59.973 55.000 19.48 0.00 44.88 1.73 F
371 372 0.034089 CTTCCCACCACCCTTCATCC 60.034 60.000 0.00 0.00 0.00 3.51 F
571 572 0.039074 TTTTTAACGCACGGGCATGG 60.039 50.000 11.77 0.00 41.24 3.66 F
579 580 0.177141 GCACGGGCATGGTTCTAGTA 59.823 55.000 3.77 0.00 40.72 1.82 F
2017 2056 0.034337 TAGTGGTGCACCGGAAAGAC 59.966 55.000 30.07 20.89 39.43 3.01 F
3747 5983 0.036875 AGGGCTCGGGAAAAAGACTG 59.963 55.000 0.00 0.00 0.00 3.51 F
4101 6341 0.179124 GCTGCTTGTAGGAGGAGACG 60.179 60.000 0.00 0.00 37.29 4.18 F
5459 7931 1.908065 AAAGCGCCGTTTGCATAATC 58.092 45.000 2.29 0.00 41.33 1.75 F
6130 8606 1.001406 ACCAAAGCCTTCTCGTCTCAG 59.999 52.381 0.00 0.00 0.00 3.35 F
6655 9131 0.984230 AGAATGCTCGTGAAAGGGGA 59.016 50.000 0.00 0.00 0.00 4.81 F
7494 9973 1.009183 CCCCCTCCCTTAGTTACTCCA 59.991 57.143 0.00 0.00 0.00 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1234 1260 0.712380 AAGCCAATCCACCCATTCCT 59.288 50.000 0.00 0.00 0.00 3.36 R
1373 1399 1.134946 GATGCAATGTGTGGTAAGGCC 59.865 52.381 0.00 0.00 37.90 5.19 R
2017 2056 1.713033 CGCGTCGTCAACAACAACG 60.713 57.895 0.00 0.00 40.17 4.10 R
2104 2145 3.312504 CGTCCGTCTACGCATGCG 61.313 66.667 36.79 36.79 46.03 4.73 R
3075 5306 3.402681 CCTGCATCACCCCGACCT 61.403 66.667 0.00 0.00 0.00 3.85 R
5653 8127 1.052287 GCACAAAAGAAATGACGCGG 58.948 50.000 12.47 0.00 0.00 6.46 R
5654 8128 2.036556 AGCACAAAAGAAATGACGCG 57.963 45.000 3.53 3.53 0.00 6.01 R
6655 9131 0.253327 GGCGAAACTTCCCTCTCCAT 59.747 55.000 0.00 0.00 0.00 3.41 R
7866 10459 0.973632 TGCACTTAGACATGTCGGGT 59.026 50.000 19.85 15.89 34.09 5.28 R
7867 10460 1.359848 GTGCACTTAGACATGTCGGG 58.640 55.000 19.85 15.30 34.09 5.14 R
9000 13424 0.327924 TACAGGGTACGTTCTCGGGA 59.672 55.000 0.00 0.00 41.85 5.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
61 62 4.962836 GCGGCTGGATGGGGGATG 62.963 72.222 0.00 0.00 0.00 3.51
62 63 4.275508 CGGCTGGATGGGGGATGG 62.276 72.222 0.00 0.00 0.00 3.51
63 64 3.907130 GGCTGGATGGGGGATGGG 61.907 72.222 0.00 0.00 0.00 4.00
64 65 2.778278 GCTGGATGGGGGATGGGA 60.778 66.667 0.00 0.00 0.00 4.37
65 66 2.838467 GCTGGATGGGGGATGGGAG 61.838 68.421 0.00 0.00 0.00 4.30
66 67 1.386485 CTGGATGGGGGATGGGAGT 60.386 63.158 0.00 0.00 0.00 3.85
67 68 0.995675 CTGGATGGGGGATGGGAGTT 60.996 60.000 0.00 0.00 0.00 3.01
68 69 1.288508 TGGATGGGGGATGGGAGTTG 61.289 60.000 0.00 0.00 0.00 3.16
69 70 1.152673 GATGGGGGATGGGAGTTGC 60.153 63.158 0.00 0.00 0.00 4.17
70 71 2.965716 GATGGGGGATGGGAGTTGCG 62.966 65.000 0.00 0.00 0.00 4.85
71 72 3.407967 GGGGGATGGGAGTTGCGA 61.408 66.667 0.00 0.00 0.00 5.10
72 73 2.190578 GGGGATGGGAGTTGCGAG 59.809 66.667 0.00 0.00 0.00 5.03
73 74 2.514824 GGGATGGGAGTTGCGAGC 60.515 66.667 0.00 0.00 0.00 5.03
74 75 2.892425 GGATGGGAGTTGCGAGCG 60.892 66.667 0.00 0.00 0.00 5.03
75 76 2.184322 GATGGGAGTTGCGAGCGA 59.816 61.111 0.00 0.00 0.00 4.93
76 77 1.880340 GATGGGAGTTGCGAGCGAG 60.880 63.158 0.00 0.00 0.00 5.03
77 78 4.742201 TGGGAGTTGCGAGCGAGC 62.742 66.667 0.00 0.00 37.71 5.03
100 101 3.127533 GGAGCGGACGCAGCAAAT 61.128 61.111 19.48 0.00 44.88 2.32
101 102 1.813753 GGAGCGGACGCAGCAAATA 60.814 57.895 19.48 0.00 44.88 1.40
102 103 1.366111 GGAGCGGACGCAGCAAATAA 61.366 55.000 19.48 0.00 44.88 1.40
103 104 0.026803 GAGCGGACGCAGCAAATAAG 59.973 55.000 19.48 0.00 44.88 1.73
104 105 1.583709 GCGGACGCAGCAAATAAGC 60.584 57.895 12.31 0.00 41.49 3.09
109 110 2.951227 GCAGCAAATAAGCGGCGC 60.951 61.111 26.86 26.86 45.03 6.53
110 111 2.648724 CAGCAAATAAGCGGCGCG 60.649 61.111 27.59 12.27 40.15 6.86
121 122 4.147322 CGGCGCGCGATTGAGTTT 62.147 61.111 37.18 0.00 0.00 2.66
122 123 2.276680 GGCGCGCGATTGAGTTTC 60.277 61.111 37.18 12.28 0.00 2.78
123 124 2.641663 GCGCGCGATTGAGTTTCG 60.642 61.111 37.18 0.41 39.55 3.46
124 125 2.020016 CGCGCGATTGAGTTTCGG 59.980 61.111 28.94 0.00 37.10 4.30
125 126 2.276680 GCGCGATTGAGTTTCGGC 60.277 61.111 12.10 0.00 37.10 5.54
126 127 2.399611 CGCGATTGAGTTTCGGCC 59.600 61.111 0.00 0.00 37.10 6.13
127 128 2.791927 GCGATTGAGTTTCGGCCC 59.208 61.111 0.00 0.00 37.10 5.80
128 129 3.089784 CGATTGAGTTTCGGCCCG 58.910 61.111 0.00 0.00 33.05 6.13
129 130 2.791927 GATTGAGTTTCGGCCCGC 59.208 61.111 0.00 0.00 0.00 6.13
130 131 3.095898 GATTGAGTTTCGGCCCGCG 62.096 63.158 0.00 0.00 0.00 6.46
140 141 4.143333 GGCCCGCGCTCTGAACTA 62.143 66.667 5.56 0.00 34.44 2.24
141 142 2.886124 GCCCGCGCTCTGAACTAC 60.886 66.667 5.56 0.00 0.00 2.73
142 143 2.571757 CCCGCGCTCTGAACTACA 59.428 61.111 5.56 0.00 0.00 2.74
143 144 1.141881 CCCGCGCTCTGAACTACAT 59.858 57.895 5.56 0.00 0.00 2.29
144 145 0.384309 CCCGCGCTCTGAACTACATA 59.616 55.000 5.56 0.00 0.00 2.29
145 146 1.000163 CCCGCGCTCTGAACTACATAT 60.000 52.381 5.56 0.00 0.00 1.78
146 147 2.054363 CCGCGCTCTGAACTACATATG 58.946 52.381 5.56 0.00 0.00 1.78
147 148 1.453524 CGCGCTCTGAACTACATATGC 59.546 52.381 5.56 0.00 0.00 3.14
148 149 1.795286 GCGCTCTGAACTACATATGCC 59.205 52.381 0.00 0.00 0.00 4.40
149 150 2.054363 CGCTCTGAACTACATATGCCG 58.946 52.381 1.58 0.00 0.00 5.69
150 151 1.795286 GCTCTGAACTACATATGCCGC 59.205 52.381 1.58 0.00 0.00 6.53
151 152 2.054363 CTCTGAACTACATATGCCGCG 58.946 52.381 1.58 0.00 0.00 6.46
152 153 0.508641 CTGAACTACATATGCCGCGC 59.491 55.000 0.00 0.00 0.00 6.86
153 154 1.212455 TGAACTACATATGCCGCGCG 61.212 55.000 25.67 25.67 0.00 6.86
154 155 2.480426 GAACTACATATGCCGCGCGC 62.480 60.000 27.36 23.91 38.31 6.86
155 156 4.121227 CTACATATGCCGCGCGCG 62.121 66.667 43.73 43.73 42.08 6.86
184 185 4.451150 CGCCCGCTGGAGCAACTA 62.451 66.667 0.00 0.00 42.21 2.24
185 186 2.190578 GCCCGCTGGAGCAACTAT 59.809 61.111 0.00 0.00 42.21 2.12
186 187 1.445942 GCCCGCTGGAGCAACTATA 59.554 57.895 0.00 0.00 42.21 1.31
187 188 0.880718 GCCCGCTGGAGCAACTATAC 60.881 60.000 0.00 0.00 42.21 1.47
188 189 0.249911 CCCGCTGGAGCAACTATACC 60.250 60.000 0.00 0.00 42.21 2.73
189 190 0.597637 CCGCTGGAGCAACTATACCG 60.598 60.000 0.00 0.00 42.21 4.02
190 191 0.597637 CGCTGGAGCAACTATACCGG 60.598 60.000 0.00 0.00 42.21 5.28
191 192 0.464452 GCTGGAGCAACTATACCGGT 59.536 55.000 13.98 13.98 41.59 5.28
192 193 1.134491 GCTGGAGCAACTATACCGGTT 60.134 52.381 15.04 3.05 41.59 4.44
193 194 2.550978 CTGGAGCAACTATACCGGTTG 58.449 52.381 15.04 5.42 44.60 3.77
197 198 1.634225 CAACTATACCGGTTGCGCG 59.366 57.895 15.04 0.00 37.76 6.86
198 199 2.169146 AACTATACCGGTTGCGCGC 61.169 57.895 27.26 27.26 0.00 6.86
199 200 3.688330 CTATACCGGTTGCGCGCG 61.688 66.667 28.44 28.44 0.00 6.86
215 216 2.483288 CGCGCTAAAACGGGCAAT 59.517 55.556 5.56 0.00 42.32 3.56
216 217 1.154112 CGCGCTAAAACGGGCAATT 60.154 52.632 5.56 0.00 42.32 2.32
217 218 0.731174 CGCGCTAAAACGGGCAATTT 60.731 50.000 5.56 0.00 42.32 1.82
218 219 1.424403 GCGCTAAAACGGGCAATTTT 58.576 45.000 0.00 3.81 41.86 1.82
219 220 1.125930 GCGCTAAAACGGGCAATTTTG 59.874 47.619 0.00 0.00 41.86 2.44
246 247 4.166011 GCTAGTTTGGCGCGGCTG 62.166 66.667 33.23 16.16 0.00 4.85
247 248 2.742372 CTAGTTTGGCGCGGCTGT 60.742 61.111 33.23 16.80 0.00 4.40
248 249 2.281208 TAGTTTGGCGCGGCTGTT 60.281 55.556 33.23 17.83 0.00 3.16
249 250 2.513065 CTAGTTTGGCGCGGCTGTTG 62.513 60.000 33.23 14.34 0.00 3.33
250 251 4.999939 GTTTGGCGCGGCTGTTGG 63.000 66.667 33.23 0.00 0.00 3.77
255 256 3.869272 GCGCGGCTGTTGGAGATG 61.869 66.667 8.83 0.00 0.00 2.90
256 257 3.869272 CGCGGCTGTTGGAGATGC 61.869 66.667 0.00 0.00 0.00 3.91
257 258 2.437359 GCGGCTGTTGGAGATGCT 60.437 61.111 0.00 0.00 0.00 3.79
258 259 2.467826 GCGGCTGTTGGAGATGCTC 61.468 63.158 0.00 0.00 0.00 4.26
259 260 1.220206 CGGCTGTTGGAGATGCTCT 59.780 57.895 0.00 0.00 0.00 4.09
260 261 0.392193 CGGCTGTTGGAGATGCTCTT 60.392 55.000 0.00 0.00 0.00 2.85
261 262 1.134699 CGGCTGTTGGAGATGCTCTTA 60.135 52.381 0.00 0.00 0.00 2.10
262 263 2.484417 CGGCTGTTGGAGATGCTCTTAT 60.484 50.000 0.00 0.00 0.00 1.73
263 264 3.243873 CGGCTGTTGGAGATGCTCTTATA 60.244 47.826 0.00 0.00 0.00 0.98
264 265 4.314121 GGCTGTTGGAGATGCTCTTATAG 58.686 47.826 0.00 0.00 0.00 1.31
265 266 4.202305 GGCTGTTGGAGATGCTCTTATAGT 60.202 45.833 0.00 0.00 0.00 2.12
266 267 5.363939 GCTGTTGGAGATGCTCTTATAGTT 58.636 41.667 0.00 0.00 0.00 2.24
267 268 6.463049 GGCTGTTGGAGATGCTCTTATAGTTA 60.463 42.308 0.00 0.00 0.00 2.24
268 269 6.986817 GCTGTTGGAGATGCTCTTATAGTTAA 59.013 38.462 0.00 0.00 0.00 2.01
269 270 7.170658 GCTGTTGGAGATGCTCTTATAGTTAAG 59.829 40.741 0.00 0.00 36.87 1.85
270 271 7.500992 TGTTGGAGATGCTCTTATAGTTAAGG 58.499 38.462 0.00 0.00 36.30 2.69
271 272 7.125811 TGTTGGAGATGCTCTTATAGTTAAGGT 59.874 37.037 0.00 0.00 36.30 3.50
272 273 7.291411 TGGAGATGCTCTTATAGTTAAGGTC 57.709 40.000 0.00 0.00 36.30 3.85
273 274 7.069986 TGGAGATGCTCTTATAGTTAAGGTCT 58.930 38.462 0.00 0.00 36.30 3.85
274 275 7.231722 TGGAGATGCTCTTATAGTTAAGGTCTC 59.768 40.741 0.00 0.00 36.30 3.36
275 276 7.309560 GGAGATGCTCTTATAGTTAAGGTCTCC 60.310 44.444 0.00 0.00 39.51 3.71
276 277 7.302184 AGATGCTCTTATAGTTAAGGTCTCCT 58.698 38.462 0.00 0.00 36.30 3.69
277 278 7.787424 AGATGCTCTTATAGTTAAGGTCTCCTT 59.213 37.037 6.30 6.30 46.63 3.36
278 279 7.349412 TGCTCTTATAGTTAAGGTCTCCTTC 57.651 40.000 4.21 0.00 43.57 3.46
279 280 6.324254 TGCTCTTATAGTTAAGGTCTCCTTCC 59.676 42.308 4.21 0.00 43.57 3.46
280 281 6.324254 GCTCTTATAGTTAAGGTCTCCTTCCA 59.676 42.308 4.21 0.00 43.57 3.53
281 282 7.657023 TCTTATAGTTAAGGTCTCCTTCCAC 57.343 40.000 4.21 3.98 43.57 4.02
282 283 7.186972 TCTTATAGTTAAGGTCTCCTTCCACA 58.813 38.462 4.21 0.00 43.57 4.17
283 284 5.678955 ATAGTTAAGGTCTCCTTCCACAC 57.321 43.478 4.21 0.00 43.57 3.82
284 285 3.314693 AGTTAAGGTCTCCTTCCACACA 58.685 45.455 4.21 0.00 43.57 3.72
285 286 3.325135 AGTTAAGGTCTCCTTCCACACAG 59.675 47.826 4.21 0.00 43.57 3.66
286 287 2.103153 AAGGTCTCCTTCCACACAGA 57.897 50.000 0.00 0.00 40.17 3.41
287 288 1.343069 AGGTCTCCTTCCACACAGAC 58.657 55.000 0.00 0.00 35.49 3.51
288 289 0.038159 GGTCTCCTTCCACACAGACG 60.038 60.000 0.00 0.00 36.85 4.18
289 290 0.667792 GTCTCCTTCCACACAGACGC 60.668 60.000 0.00 0.00 0.00 5.19
290 291 1.112916 TCTCCTTCCACACAGACGCA 61.113 55.000 0.00 0.00 0.00 5.24
291 292 0.036952 CTCCTTCCACACAGACGCAT 60.037 55.000 0.00 0.00 0.00 4.73
292 293 0.037326 TCCTTCCACACAGACGCATC 60.037 55.000 0.00 0.00 0.00 3.91
293 294 1.354337 CCTTCCACACAGACGCATCG 61.354 60.000 0.00 0.00 0.00 3.84
294 295 0.667487 CTTCCACACAGACGCATCGT 60.667 55.000 0.00 0.00 45.10 3.73
303 304 3.781212 GACGCATCGTCGGAAATTC 57.219 52.632 3.54 0.00 46.56 2.17
304 305 1.278238 GACGCATCGTCGGAAATTCT 58.722 50.000 3.54 0.00 46.56 2.40
305 306 0.999406 ACGCATCGTCGGAAATTCTG 59.001 50.000 0.00 0.00 33.69 3.02
306 307 1.277326 CGCATCGTCGGAAATTCTGA 58.723 50.000 0.00 0.00 0.00 3.27
307 308 1.658596 CGCATCGTCGGAAATTCTGAA 59.341 47.619 6.03 0.00 32.84 3.02
308 309 2.285220 CGCATCGTCGGAAATTCTGAAT 59.715 45.455 6.03 0.00 32.84 2.57
309 310 3.602491 CGCATCGTCGGAAATTCTGAATC 60.602 47.826 6.03 0.00 32.84 2.52
310 311 3.557595 GCATCGTCGGAAATTCTGAATCT 59.442 43.478 6.03 0.00 32.84 2.40
311 312 4.318404 GCATCGTCGGAAATTCTGAATCTC 60.318 45.833 6.03 0.00 32.84 2.75
312 313 4.720649 TCGTCGGAAATTCTGAATCTCT 57.279 40.909 6.03 0.00 32.84 3.10
313 314 5.830000 TCGTCGGAAATTCTGAATCTCTA 57.170 39.130 6.03 0.00 32.84 2.43
314 315 5.579718 TCGTCGGAAATTCTGAATCTCTAC 58.420 41.667 6.03 2.29 32.84 2.59
315 316 4.740695 CGTCGGAAATTCTGAATCTCTACC 59.259 45.833 6.03 3.06 32.84 3.18
316 317 5.450688 CGTCGGAAATTCTGAATCTCTACCT 60.451 44.000 6.03 0.00 32.84 3.08
317 318 6.238676 CGTCGGAAATTCTGAATCTCTACCTA 60.239 42.308 6.03 0.00 32.84 3.08
318 319 6.919115 GTCGGAAATTCTGAATCTCTACCTAC 59.081 42.308 6.03 2.87 32.84 3.18
319 320 6.834451 TCGGAAATTCTGAATCTCTACCTACT 59.166 38.462 1.37 0.00 0.00 2.57
320 321 7.342284 TCGGAAATTCTGAATCTCTACCTACTT 59.658 37.037 1.37 0.00 0.00 2.24
321 322 7.982354 CGGAAATTCTGAATCTCTACCTACTTT 59.018 37.037 2.92 0.00 0.00 2.66
349 350 9.588096 AAAGAATGTAAGGTTTCTATTTCACCT 57.412 29.630 0.00 0.00 43.17 4.00
351 352 9.588096 AGAATGTAAGGTTTCTATTTCACCTTT 57.412 29.630 8.08 0.00 46.85 3.11
352 353 9.841880 GAATGTAAGGTTTCTATTTCACCTTTC 57.158 33.333 8.08 4.36 46.85 2.62
353 354 9.588096 AATGTAAGGTTTCTATTTCACCTTTCT 57.412 29.630 8.08 0.00 46.85 2.52
354 355 8.990163 TGTAAGGTTTCTATTTCACCTTTCTT 57.010 30.769 8.08 0.00 46.85 2.52
355 356 9.063615 TGTAAGGTTTCTATTTCACCTTTCTTC 57.936 33.333 8.08 0.00 46.85 2.87
356 357 7.526142 AAGGTTTCTATTTCACCTTTCTTCC 57.474 36.000 0.00 0.00 46.85 3.46
357 358 6.010850 AGGTTTCTATTTCACCTTTCTTCCC 58.989 40.000 0.00 0.00 37.70 3.97
358 359 5.773176 GGTTTCTATTTCACCTTTCTTCCCA 59.227 40.000 0.00 0.00 0.00 4.37
359 360 6.294564 GGTTTCTATTTCACCTTTCTTCCCAC 60.295 42.308 0.00 0.00 0.00 4.61
360 361 4.918588 TCTATTTCACCTTTCTTCCCACC 58.081 43.478 0.00 0.00 0.00 4.61
361 362 3.611025 ATTTCACCTTTCTTCCCACCA 57.389 42.857 0.00 0.00 0.00 4.17
362 363 2.358322 TTCACCTTTCTTCCCACCAC 57.642 50.000 0.00 0.00 0.00 4.16
363 364 0.476771 TCACCTTTCTTCCCACCACC 59.523 55.000 0.00 0.00 0.00 4.61
364 365 0.539669 CACCTTTCTTCCCACCACCC 60.540 60.000 0.00 0.00 0.00 4.61
365 366 0.701310 ACCTTTCTTCCCACCACCCT 60.701 55.000 0.00 0.00 0.00 4.34
366 367 0.482887 CCTTTCTTCCCACCACCCTT 59.517 55.000 0.00 0.00 0.00 3.95
367 368 1.547901 CCTTTCTTCCCACCACCCTTC 60.548 57.143 0.00 0.00 0.00 3.46
368 369 1.144913 CTTTCTTCCCACCACCCTTCA 59.855 52.381 0.00 0.00 0.00 3.02
369 370 1.455822 TTCTTCCCACCACCCTTCAT 58.544 50.000 0.00 0.00 0.00 2.57
370 371 0.991920 TCTTCCCACCACCCTTCATC 59.008 55.000 0.00 0.00 0.00 2.92
371 372 0.034089 CTTCCCACCACCCTTCATCC 60.034 60.000 0.00 0.00 0.00 3.51
372 373 0.774096 TTCCCACCACCCTTCATCCA 60.774 55.000 0.00 0.00 0.00 3.41
373 374 0.774096 TCCCACCACCCTTCATCCAA 60.774 55.000 0.00 0.00 0.00 3.53
374 375 0.611896 CCCACCACCCTTCATCCAAC 60.612 60.000 0.00 0.00 0.00 3.77
375 376 0.611896 CCACCACCCTTCATCCAACC 60.612 60.000 0.00 0.00 0.00 3.77
376 377 0.405585 CACCACCCTTCATCCAACCT 59.594 55.000 0.00 0.00 0.00 3.50
377 378 1.158007 ACCACCCTTCATCCAACCTT 58.842 50.000 0.00 0.00 0.00 3.50
378 379 1.075536 ACCACCCTTCATCCAACCTTC 59.924 52.381 0.00 0.00 0.00 3.46
379 380 1.616994 CCACCCTTCATCCAACCTTCC 60.617 57.143 0.00 0.00 0.00 3.46
380 381 1.075374 CACCCTTCATCCAACCTTCCA 59.925 52.381 0.00 0.00 0.00 3.53
381 382 2.003072 ACCCTTCATCCAACCTTCCAT 58.997 47.619 0.00 0.00 0.00 3.41
382 383 2.291800 ACCCTTCATCCAACCTTCCATG 60.292 50.000 0.00 0.00 0.00 3.66
383 384 2.291800 CCCTTCATCCAACCTTCCATGT 60.292 50.000 0.00 0.00 0.00 3.21
384 385 3.053693 CCCTTCATCCAACCTTCCATGTA 60.054 47.826 0.00 0.00 0.00 2.29
385 386 4.386761 CCCTTCATCCAACCTTCCATGTAT 60.387 45.833 0.00 0.00 0.00 2.29
386 387 5.163099 CCCTTCATCCAACCTTCCATGTATA 60.163 44.000 0.00 0.00 0.00 1.47
387 388 5.765182 CCTTCATCCAACCTTCCATGTATAC 59.235 44.000 0.00 0.00 0.00 1.47
388 389 4.956085 TCATCCAACCTTCCATGTATACG 58.044 43.478 0.00 0.00 0.00 3.06
389 390 4.651962 TCATCCAACCTTCCATGTATACGA 59.348 41.667 0.00 0.00 0.00 3.43
390 391 5.306937 TCATCCAACCTTCCATGTATACGAT 59.693 40.000 0.00 0.00 0.00 3.73
391 392 6.495526 TCATCCAACCTTCCATGTATACGATA 59.504 38.462 0.00 0.00 0.00 2.92
392 393 6.734502 TCCAACCTTCCATGTATACGATAA 57.265 37.500 0.00 0.00 0.00 1.75
393 394 7.311092 TCCAACCTTCCATGTATACGATAAT 57.689 36.000 0.00 0.00 0.00 1.28
394 395 7.383687 TCCAACCTTCCATGTATACGATAATC 58.616 38.462 0.00 0.00 0.00 1.75
395 396 7.015779 TCCAACCTTCCATGTATACGATAATCA 59.984 37.037 0.00 0.00 0.00 2.57
396 397 7.659799 CCAACCTTCCATGTATACGATAATCAA 59.340 37.037 0.00 0.00 0.00 2.57
397 398 9.219603 CAACCTTCCATGTATACGATAATCAAT 57.780 33.333 0.00 0.00 0.00 2.57
398 399 9.436957 AACCTTCCATGTATACGATAATCAATC 57.563 33.333 0.00 0.00 0.00 2.67
399 400 8.593679 ACCTTCCATGTATACGATAATCAATCA 58.406 33.333 0.00 0.00 33.87 2.57
400 401 8.873830 CCTTCCATGTATACGATAATCAATCAC 58.126 37.037 0.00 0.00 33.87 3.06
401 402 8.771920 TTCCATGTATACGATAATCAATCACC 57.228 34.615 0.00 0.00 33.87 4.02
402 403 8.134202 TCCATGTATACGATAATCAATCACCT 57.866 34.615 0.00 0.00 33.87 4.00
403 404 8.593679 TCCATGTATACGATAATCAATCACCTT 58.406 33.333 0.00 0.00 33.87 3.50
404 405 9.869757 CCATGTATACGATAATCAATCACCTTA 57.130 33.333 0.00 0.00 33.87 2.69
454 455 9.920946 ATCCATTTTAATTTACTTAGCTCCTGA 57.079 29.630 0.00 0.00 0.00 3.86
455 456 9.396022 TCCATTTTAATTTACTTAGCTCCTGAG 57.604 33.333 0.00 0.00 0.00 3.35
470 471 5.557891 CTCCTGAGCCAATTTCACTTTAG 57.442 43.478 0.00 0.00 0.00 1.85
471 472 4.985538 TCCTGAGCCAATTTCACTTTAGT 58.014 39.130 0.00 0.00 0.00 2.24
472 473 5.385198 TCCTGAGCCAATTTCACTTTAGTT 58.615 37.500 0.00 0.00 0.00 2.24
473 474 5.833131 TCCTGAGCCAATTTCACTTTAGTTT 59.167 36.000 0.00 0.00 0.00 2.66
474 475 7.001674 TCCTGAGCCAATTTCACTTTAGTTTA 58.998 34.615 0.00 0.00 0.00 2.01
475 476 7.040686 TCCTGAGCCAATTTCACTTTAGTTTAC 60.041 37.037 0.00 0.00 0.00 2.01
476 477 7.040409 CCTGAGCCAATTTCACTTTAGTTTACT 60.040 37.037 0.00 0.00 0.00 2.24
477 478 8.232913 TGAGCCAATTTCACTTTAGTTTACTT 57.767 30.769 0.00 0.00 0.00 2.24
478 479 9.344772 TGAGCCAATTTCACTTTAGTTTACTTA 57.655 29.630 0.00 0.00 0.00 2.24
479 480 9.608617 GAGCCAATTTCACTTTAGTTTACTTAC 57.391 33.333 0.00 0.00 0.00 2.34
480 481 9.350951 AGCCAATTTCACTTTAGTTTACTTACT 57.649 29.630 0.00 0.00 0.00 2.24
562 563 9.678941 TTACACAATCACATTATTTTTAACGCA 57.321 25.926 0.00 0.00 0.00 5.24
563 564 8.002433 ACACAATCACATTATTTTTAACGCAC 57.998 30.769 0.00 0.00 0.00 5.34
564 565 7.149047 ACACAATCACATTATTTTTAACGCACG 60.149 33.333 0.00 0.00 0.00 5.34
565 566 6.306837 ACAATCACATTATTTTTAACGCACGG 59.693 34.615 0.00 0.00 0.00 4.94
566 567 4.724303 TCACATTATTTTTAACGCACGGG 58.276 39.130 0.00 0.00 0.00 5.28
567 568 3.302170 CACATTATTTTTAACGCACGGGC 59.698 43.478 0.00 0.00 0.00 6.13
568 569 3.057456 ACATTATTTTTAACGCACGGGCA 60.057 39.130 11.77 0.00 41.24 5.36
569 570 3.851976 TTATTTTTAACGCACGGGCAT 57.148 38.095 11.77 0.00 41.24 4.40
570 571 1.989430 ATTTTTAACGCACGGGCATG 58.011 45.000 11.77 0.00 41.24 4.06
571 572 0.039074 TTTTTAACGCACGGGCATGG 60.039 50.000 11.77 0.00 41.24 3.66
572 573 1.173444 TTTTAACGCACGGGCATGGT 61.173 50.000 11.77 0.00 41.24 3.55
573 574 1.173444 TTTAACGCACGGGCATGGTT 61.173 50.000 11.77 8.72 41.24 3.67
574 575 1.579084 TTAACGCACGGGCATGGTTC 61.579 55.000 11.77 0.00 41.24 3.62
575 576 2.457743 TAACGCACGGGCATGGTTCT 62.458 55.000 11.77 0.00 41.24 3.01
576 577 2.125310 CGCACGGGCATGGTTCTA 60.125 61.111 11.77 0.00 41.24 2.10
577 578 2.173669 CGCACGGGCATGGTTCTAG 61.174 63.158 11.77 0.00 41.24 2.43
578 579 1.078426 GCACGGGCATGGTTCTAGT 60.078 57.895 3.77 0.00 40.72 2.57
579 580 0.177141 GCACGGGCATGGTTCTAGTA 59.823 55.000 3.77 0.00 40.72 1.82
580 581 1.406341 GCACGGGCATGGTTCTAGTAA 60.406 52.381 3.77 0.00 40.72 2.24
581 582 2.937873 GCACGGGCATGGTTCTAGTAAA 60.938 50.000 3.77 0.00 40.72 2.01
582 583 3.541632 CACGGGCATGGTTCTAGTAAAT 58.458 45.455 0.00 0.00 0.00 1.40
583 584 3.560068 CACGGGCATGGTTCTAGTAAATC 59.440 47.826 0.00 0.00 0.00 2.17
584 585 3.454812 ACGGGCATGGTTCTAGTAAATCT 59.545 43.478 0.00 0.00 0.00 2.40
585 586 4.652421 ACGGGCATGGTTCTAGTAAATCTA 59.348 41.667 0.00 0.00 0.00 1.98
586 587 5.221461 ACGGGCATGGTTCTAGTAAATCTAG 60.221 44.000 0.00 0.00 45.37 2.43
612 613 3.599730 TGAGCATCAGAACCTACACTG 57.400 47.619 0.00 0.00 42.56 3.66
613 614 3.165071 TGAGCATCAGAACCTACACTGA 58.835 45.455 0.00 0.00 42.56 3.41
619 620 4.790765 TCAGAACCTACACTGATGACTG 57.209 45.455 0.00 0.00 38.08 3.51
620 621 4.407365 TCAGAACCTACACTGATGACTGA 58.593 43.478 0.00 0.00 38.08 3.41
621 622 5.019470 TCAGAACCTACACTGATGACTGAT 58.981 41.667 0.00 0.00 38.08 2.90
622 623 5.105595 TCAGAACCTACACTGATGACTGATG 60.106 44.000 0.00 0.00 38.08 3.07
623 624 4.161189 AGAACCTACACTGATGACTGATGG 59.839 45.833 0.00 0.00 0.00 3.51
624 625 2.768527 ACCTACACTGATGACTGATGGG 59.231 50.000 0.00 0.00 0.00 4.00
629 630 1.340405 ACTGATGACTGATGGGTTGGC 60.340 52.381 0.00 0.00 0.00 4.52
647 648 3.486383 TGGCGGTCATTCTTTTCTTTCT 58.514 40.909 0.00 0.00 0.00 2.52
667 668 8.777413 TCTTTCTGAACAAACATTATCAGTCTG 58.223 33.333 0.00 0.00 40.11 3.51
681 682 0.810031 AGTCTGTGGTTGTGTCGTGC 60.810 55.000 0.00 0.00 0.00 5.34
685 686 3.268603 TGGTTGTGTCGTGCTGCG 61.269 61.111 0.00 0.00 43.01 5.18
746 747 5.193099 ACACTCCTTGCCCTATGTATTTT 57.807 39.130 0.00 0.00 0.00 1.82
747 748 6.321821 ACACTCCTTGCCCTATGTATTTTA 57.678 37.500 0.00 0.00 0.00 1.52
748 749 6.911308 ACACTCCTTGCCCTATGTATTTTAT 58.089 36.000 0.00 0.00 0.00 1.40
749 750 8.041143 ACACTCCTTGCCCTATGTATTTTATA 57.959 34.615 0.00 0.00 0.00 0.98
750 751 8.669571 ACACTCCTTGCCCTATGTATTTTATAT 58.330 33.333 0.00 0.00 0.00 0.86
1196 1219 1.600916 GCCCGGTGAGTTCTTGCTT 60.601 57.895 0.00 0.00 0.00 3.91
1201 1224 1.070577 CGGTGAGTTCTTGCTTGTTCG 60.071 52.381 0.00 0.00 0.00 3.95
1209 1232 1.153066 TTGCTTGTTCGCAGGGACA 60.153 52.632 0.00 0.00 41.55 4.02
1210 1233 0.537143 TTGCTTGTTCGCAGGGACAT 60.537 50.000 0.00 0.00 41.55 3.06
1212 1235 0.955428 GCTTGTTCGCAGGGACATGA 60.955 55.000 0.00 0.00 0.00 3.07
1213 1236 1.742761 CTTGTTCGCAGGGACATGAT 58.257 50.000 0.00 0.00 0.00 2.45
1225 1251 5.471456 GCAGGGACATGATTTTATTCGATCT 59.529 40.000 0.00 0.00 0.00 2.75
1226 1252 6.567321 GCAGGGACATGATTTTATTCGATCTG 60.567 42.308 0.00 0.00 0.00 2.90
1231 1257 7.227512 GGACATGATTTTATTCGATCTGTTCCT 59.772 37.037 0.00 0.00 0.00 3.36
1234 1260 9.481340 CATGATTTTATTCGATCTGTTCCTAGA 57.519 33.333 0.00 0.00 0.00 2.43
1259 1285 4.824479 ATGGGTGGATTGGCTTAAAAAG 57.176 40.909 0.00 0.00 0.00 2.27
1277 1303 6.925610 AAAAAGCAGGTGGAAAATTTTCTC 57.074 33.333 25.86 19.23 37.35 2.87
1373 1399 3.708563 ATCGTCCCAAAACTGTTTGTG 57.291 42.857 6.53 7.36 42.26 3.33
1419 1445 3.667497 TTTGTGTTGGCTGTTTGTGAA 57.333 38.095 0.00 0.00 0.00 3.18
1420 1446 3.883830 TTGTGTTGGCTGTTTGTGAAT 57.116 38.095 0.00 0.00 0.00 2.57
1421 1447 3.883830 TGTGTTGGCTGTTTGTGAATT 57.116 38.095 0.00 0.00 0.00 2.17
1422 1448 3.519579 TGTGTTGGCTGTTTGTGAATTG 58.480 40.909 0.00 0.00 0.00 2.32
1423 1449 3.056250 TGTGTTGGCTGTTTGTGAATTGT 60.056 39.130 0.00 0.00 0.00 2.71
1424 1450 3.306703 GTGTTGGCTGTTTGTGAATTGTG 59.693 43.478 0.00 0.00 0.00 3.33
1425 1451 3.194329 TGTTGGCTGTTTGTGAATTGTGA 59.806 39.130 0.00 0.00 0.00 3.58
1426 1452 3.435105 TGGCTGTTTGTGAATTGTGAC 57.565 42.857 0.00 0.00 0.00 3.67
1447 1473 7.069569 GTGACATTGTGACACAAATACAGTAC 58.930 38.462 24.00 12.89 41.96 2.73
1449 1475 6.954944 ACATTGTGACACAAATACAGTACAC 58.045 36.000 24.00 0.00 41.96 2.90
2017 2056 0.034337 TAGTGGTGCACCGGAAAGAC 59.966 55.000 30.07 20.89 39.43 3.01
3747 5983 0.036875 AGGGCTCGGGAAAAAGACTG 59.963 55.000 0.00 0.00 0.00 3.51
4020 6260 6.534634 AGTACAAGACAAGCCAGAATACTTT 58.465 36.000 0.00 0.00 0.00 2.66
4065 6305 5.756950 ATACAATCACGTTACTCAACACG 57.243 39.130 0.00 0.00 42.29 4.49
4101 6341 0.179124 GCTGCTTGTAGGAGGAGACG 60.179 60.000 0.00 0.00 37.29 4.18
4186 6426 4.763793 GCACCTTGAGATGGCAATACATAT 59.236 41.667 0.00 0.00 0.00 1.78
4537 6897 3.574284 TGTCATTGCAGTTAATGGCAC 57.426 42.857 0.00 0.00 44.94 5.01
4618 6978 4.339872 TCAGGTGCAAATTTGAAATGCT 57.660 36.364 22.31 0.00 40.66 3.79
4704 7064 4.730949 AGTAACAGGCGACATAGCTAAA 57.269 40.909 0.00 0.00 37.29 1.85
4844 7204 5.607477 TCAATTTCTTACTGAACGTGGACT 58.393 37.500 0.00 0.00 33.88 3.85
4928 7292 7.173047 TGTTGGTACCGAAATACCTTTCTTTAC 59.827 37.037 2.45 0.00 44.43 2.01
5094 7483 8.809468 ACCCTTTTATCTTCCACTAAATTCTC 57.191 34.615 0.00 0.00 0.00 2.87
5096 7485 9.413734 CCCTTTTATCTTCCACTAAATTCTCAT 57.586 33.333 0.00 0.00 0.00 2.90
5114 7503 8.955061 ATTCTCATTACGTTCAAAAGTCATTG 57.045 30.769 0.00 0.00 0.00 2.82
5115 7504 7.490962 TCTCATTACGTTCAAAAGTCATTGT 57.509 32.000 0.00 0.00 0.00 2.71
5228 7700 7.093354 TGCTCTTTAGTGTTTATCTGAGTCTG 58.907 38.462 0.00 0.00 0.00 3.51
5443 7915 8.594881 TTTCTTGAGAACTAGCTCTGTAAAAG 57.405 34.615 0.00 0.30 35.91 2.27
5459 7931 1.908065 AAAGCGCCGTTTGCATAATC 58.092 45.000 2.29 0.00 41.33 1.75
5653 8127 6.092670 TGTGCTATCAAGTCACTATTTTCTGC 59.907 38.462 0.00 0.00 33.54 4.26
5654 8128 5.586243 TGCTATCAAGTCACTATTTTCTGCC 59.414 40.000 0.00 0.00 0.00 4.85
5656 8130 2.742053 TCAAGTCACTATTTTCTGCCGC 59.258 45.455 0.00 0.00 0.00 6.53
5712 8186 5.495502 CATTTTTCAGCACTCTTGTTTTGC 58.504 37.500 0.00 0.00 36.45 3.68
5732 8206 2.351726 GCTCCTTGTTAAGCATGTACCG 59.648 50.000 0.00 0.00 38.42 4.02
5770 8244 7.325660 AGTATCACATCGATCTTTGCATTTT 57.674 32.000 0.00 0.00 35.39 1.82
6099 8575 9.712305 GTTTGACCATAATATCAGCAGTATACT 57.288 33.333 0.00 0.00 0.00 2.12
6130 8606 1.001406 ACCAAAGCCTTCTCGTCTCAG 59.999 52.381 0.00 0.00 0.00 3.35
6209 8685 4.640201 TGTTGCACCTTCCTTTGATATAGC 59.360 41.667 0.00 0.00 0.00 2.97
6655 9131 0.984230 AGAATGCTCGTGAAAGGGGA 59.016 50.000 0.00 0.00 0.00 4.81
6975 9453 3.957497 ACTCCTCAGGCTATCTACTGTTG 59.043 47.826 0.00 0.00 36.17 3.33
6985 9463 6.611642 AGGCTATCTACTGTTGGAGAATACAA 59.388 38.462 0.00 0.00 0.00 2.41
7086 9564 4.820173 CAGTAGGTAGTGATGGACGTCATA 59.180 45.833 18.91 6.01 35.97 2.15
7435 9914 6.434652 TCCACTTCTACAAACAAAGGAAACAA 59.565 34.615 0.00 0.00 0.00 2.83
7494 9973 1.009183 CCCCCTCCCTTAGTTACTCCA 59.991 57.143 0.00 0.00 0.00 3.86
7555 10035 7.475015 TCTTACATTATTTCACAGCAAGCATC 58.525 34.615 0.00 0.00 0.00 3.91
7566 10159 3.053693 ACAGCAAGCATCCATAACCCTTA 60.054 43.478 0.00 0.00 0.00 2.69
7576 10169 6.096846 GCATCCATAACCCTTATTCAGTTTGT 59.903 38.462 0.00 0.00 0.00 2.83
7590 10183 3.325716 TCAGTTTGTAGGGAGGGTAACAC 59.674 47.826 0.00 0.00 39.74 3.32
7753 10346 4.404715 AGCAATTTCCCTCATTTCCTGATG 59.595 41.667 0.00 0.00 32.10 3.07
7801 10394 2.916716 GCATGCAAAGACAATAACACCG 59.083 45.455 14.21 0.00 0.00 4.94
7809 10402 6.568844 GCAAAGACAATAACACCGGATAAACA 60.569 38.462 9.46 0.00 0.00 2.83
7859 10452 4.125703 GGATATCAGGTCAGCTTTGAGTG 58.874 47.826 4.83 0.00 0.00 3.51
7862 10455 2.042464 TCAGGTCAGCTTTGAGTGACT 58.958 47.619 2.74 0.00 42.37 3.41
7866 10459 3.388024 AGGTCAGCTTTGAGTGACTGTTA 59.612 43.478 0.00 0.00 42.37 2.41
7867 10460 3.495001 GGTCAGCTTTGAGTGACTGTTAC 59.505 47.826 0.00 0.00 42.37 2.50
7869 10462 2.808543 CAGCTTTGAGTGACTGTTACCC 59.191 50.000 0.00 0.00 0.00 3.69
7872 10465 2.806608 TTGAGTGACTGTTACCCGAC 57.193 50.000 0.00 0.00 0.00 4.79
7913 10506 1.383523 CTGGAGAAGGCCCGAATTTC 58.616 55.000 0.00 0.00 0.00 2.17
7935 10528 2.476619 GCCACGTCAAATCTGGATATCG 59.523 50.000 0.00 0.00 0.00 2.92
7976 10569 7.174946 TCCATTTGGACAGTCAATTTTAGAGAC 59.825 37.037 2.17 0.00 39.78 3.36
8064 10660 8.902806 TGAATACATTTTAGCTGAATGTAAGGG 58.097 33.333 27.10 8.02 46.84 3.95
8068 10664 5.957842 TTTTAGCTGAATGTAAGGGTGTG 57.042 39.130 0.00 0.00 0.00 3.82
8071 10667 2.371841 AGCTGAATGTAAGGGTGTGACA 59.628 45.455 0.00 0.00 0.00 3.58
8097 10693 5.880901 ACCTCTGATATCCAACTTGTTTGT 58.119 37.500 0.00 0.00 32.71 2.83
8151 10747 0.529773 TGCAGGATATTCGTCGCCAC 60.530 55.000 0.00 0.00 0.00 5.01
8186 10782 4.680171 GTTTCGGGTTCAGGAAACATAG 57.320 45.455 10.73 0.00 46.95 2.23
8249 10845 4.788690 CAGCAAGCTGAATCATGATGATC 58.211 43.478 16.75 4.65 46.30 2.92
8287 10883 8.900511 TTATGTACTTGTAAGTAGCAGTTACG 57.099 34.615 4.79 0.00 41.81 3.18
8335 10937 8.558973 TTGTCTGTAGGTAAAGAGTAGTAGAC 57.441 38.462 0.00 0.00 33.37 2.59
8336 10938 7.915930 TGTCTGTAGGTAAAGAGTAGTAGACT 58.084 38.462 0.00 0.00 42.90 3.24
8356 10958 4.310769 ACTATAGAGATGCCAAATCGTGC 58.689 43.478 6.78 0.00 0.00 5.34
8449 11058 7.210174 TGTTCAGAATATGTCACAGCCTATAC 58.790 38.462 0.00 0.00 0.00 1.47
8544 12967 8.647256 TCCTGCCTAAACTAATATAGTACTCC 57.353 38.462 0.00 0.00 38.26 3.85
8545 12968 7.673082 TCCTGCCTAAACTAATATAGTACTCCC 59.327 40.741 0.00 0.00 38.26 4.30
8546 12969 7.674772 CCTGCCTAAACTAATATAGTACTCCCT 59.325 40.741 0.00 0.00 38.26 4.20
8547 12970 8.647256 TGCCTAAACTAATATAGTACTCCCTC 57.353 38.462 0.00 0.00 38.26 4.30
8548 12971 7.673082 TGCCTAAACTAATATAGTACTCCCTCC 59.327 40.741 0.00 0.00 38.26 4.30
8549 12972 7.148103 GCCTAAACTAATATAGTACTCCCTCCG 60.148 44.444 0.00 0.00 38.26 4.63
8550 12973 7.887495 CCTAAACTAATATAGTACTCCCTCCGT 59.113 40.741 0.00 0.00 38.26 4.69
8551 12974 7.757941 AAACTAATATAGTACTCCCTCCGTC 57.242 40.000 0.00 0.00 38.26 4.79
8552 12975 5.814481 ACTAATATAGTACTCCCTCCGTCC 58.186 45.833 0.00 0.00 37.23 4.79
8553 12976 3.735720 ATATAGTACTCCCTCCGTCCC 57.264 52.381 0.00 0.00 0.00 4.46
8554 12977 1.229131 ATAGTACTCCCTCCGTCCCA 58.771 55.000 0.00 0.00 0.00 4.37
8555 12978 1.229131 TAGTACTCCCTCCGTCCCAT 58.771 55.000 0.00 0.00 0.00 4.00
8556 12979 1.229131 AGTACTCCCTCCGTCCCATA 58.771 55.000 0.00 0.00 0.00 2.74
8557 12980 1.572415 AGTACTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
8558 12981 2.179424 AGTACTCCCTCCGTCCCATAAT 59.821 50.000 0.00 0.00 0.00 1.28
8559 12982 3.400322 AGTACTCCCTCCGTCCCATAATA 59.600 47.826 0.00 0.00 0.00 0.98
8560 12983 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
8561 12984 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
8562 12985 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
8563 12986 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
8564 12987 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
8565 12988 5.269991 TCCCTCCGTCCCATAATATAAGAG 58.730 45.833 0.00 0.00 0.00 2.85
8566 12989 4.141914 CCCTCCGTCCCATAATATAAGAGC 60.142 50.000 0.00 0.00 0.00 4.09
8567 12990 4.440250 CCTCCGTCCCATAATATAAGAGCG 60.440 50.000 0.00 0.00 0.00 5.03
8568 12991 4.084287 TCCGTCCCATAATATAAGAGCGT 58.916 43.478 0.00 0.00 0.00 5.07
8569 12992 4.525487 TCCGTCCCATAATATAAGAGCGTT 59.475 41.667 0.00 0.00 0.00 4.84
8570 12993 5.011329 TCCGTCCCATAATATAAGAGCGTTT 59.989 40.000 0.00 0.00 0.00 3.60
8571 12994 5.699458 CCGTCCCATAATATAAGAGCGTTTT 59.301 40.000 0.00 0.00 0.00 2.43
8572 12995 6.204108 CCGTCCCATAATATAAGAGCGTTTTT 59.796 38.462 0.00 0.00 0.00 1.94
8573 12996 7.069569 CGTCCCATAATATAAGAGCGTTTTTG 58.930 38.462 0.00 0.00 0.00 2.44
8574 12997 7.042321 CGTCCCATAATATAAGAGCGTTTTTGA 60.042 37.037 0.00 0.00 0.00 2.69
8575 12998 8.068380 GTCCCATAATATAAGAGCGTTTTTGAC 58.932 37.037 0.00 0.00 0.00 3.18
8576 12999 7.771361 TCCCATAATATAAGAGCGTTTTTGACA 59.229 33.333 0.00 0.00 0.00 3.58
8577 13000 7.855904 CCCATAATATAAGAGCGTTTTTGACAC 59.144 37.037 0.00 0.00 0.00 3.67
8578 13001 8.612619 CCATAATATAAGAGCGTTTTTGACACT 58.387 33.333 0.00 0.00 0.00 3.55
8581 13004 8.773404 AATATAAGAGCGTTTTTGACACTAGT 57.227 30.769 0.00 0.00 0.00 2.57
8582 13005 4.795970 AAGAGCGTTTTTGACACTAGTG 57.204 40.909 21.44 21.44 0.00 2.74
8584 13007 4.940463 AGAGCGTTTTTGACACTAGTGTA 58.060 39.130 27.98 11.50 45.05 2.90
8585 13008 4.982916 AGAGCGTTTTTGACACTAGTGTAG 59.017 41.667 27.98 13.76 45.05 2.74
8586 13009 4.690122 AGCGTTTTTGACACTAGTGTAGT 58.310 39.130 27.98 6.32 45.05 2.73
8587 13010 5.835257 AGCGTTTTTGACACTAGTGTAGTA 58.165 37.500 27.98 14.71 45.05 1.82
8588 13011 6.453092 AGCGTTTTTGACACTAGTGTAGTAT 58.547 36.000 27.98 5.50 45.05 2.12
8589 13012 7.596494 AGCGTTTTTGACACTAGTGTAGTATA 58.404 34.615 27.98 11.38 45.05 1.47
8590 13013 8.084073 AGCGTTTTTGACACTAGTGTAGTATAA 58.916 33.333 27.98 15.22 45.05 0.98
8591 13014 8.702438 GCGTTTTTGACACTAGTGTAGTATAAA 58.298 33.333 27.98 19.02 45.05 1.40
8614 13037 6.910536 AAAACGCTCTTGTATTATGAGAGG 57.089 37.500 0.00 0.00 37.86 3.69
8618 13041 5.146010 GCTCTTGTATTATGAGAGGGAGG 57.854 47.826 0.00 0.00 37.86 4.30
8619 13042 4.020662 GCTCTTGTATTATGAGAGGGAGGG 60.021 50.000 0.00 0.00 37.86 4.30
8667 13090 7.178274 TGGTATGATTACTCTGCCAAACAAATT 59.822 33.333 0.00 0.00 0.00 1.82
8726 13149 3.756434 ACAAACTAACAGCACCGCATAAT 59.244 39.130 0.00 0.00 0.00 1.28
8755 13179 5.578727 GTGACTCTTACACCAAGCAATAGAG 59.421 44.000 0.00 0.00 33.94 2.43
8786 13210 1.995484 CACAGTCGACTTAGTGCATGG 59.005 52.381 17.26 3.61 0.00 3.66
8803 13227 7.887381 AGTGCATGGACATATAGAAGTACTAC 58.113 38.462 20.21 0.00 33.62 2.73
8804 13228 7.726291 AGTGCATGGACATATAGAAGTACTACT 59.274 37.037 20.21 0.00 33.62 2.57
8805 13229 8.024285 GTGCATGGACATATAGAAGTACTACTC 58.976 40.741 13.07 0.00 33.62 2.59
8806 13230 7.176865 TGCATGGACATATAGAAGTACTACTCC 59.823 40.741 0.00 0.00 33.62 3.85
8807 13231 7.363094 GCATGGACATATAGAAGTACTACTCCC 60.363 44.444 0.00 0.00 33.62 4.30
8808 13232 7.403837 TGGACATATAGAAGTACTACTCCCT 57.596 40.000 0.00 0.00 33.62 4.20
8809 13233 7.460071 TGGACATATAGAAGTACTACTCCCTC 58.540 42.308 0.00 0.00 33.62 4.30
8810 13234 6.885918 GGACATATAGAAGTACTACTCCCTCC 59.114 46.154 0.00 0.00 33.62 4.30
8811 13235 6.474630 ACATATAGAAGTACTACTCCCTCCG 58.525 44.000 0.00 0.00 33.62 4.63
8812 13236 6.044171 ACATATAGAAGTACTACTCCCTCCGT 59.956 42.308 0.00 0.00 33.62 4.69
8813 13237 3.735720 AGAAGTACTACTCCCTCCGTT 57.264 47.619 0.00 0.00 0.00 4.44
8814 13238 3.619419 AGAAGTACTACTCCCTCCGTTC 58.381 50.000 0.00 0.00 0.00 3.95
8815 13239 3.009916 AGAAGTACTACTCCCTCCGTTCA 59.990 47.826 0.00 0.00 0.00 3.18
8816 13240 2.720915 AGTACTACTCCCTCCGTTCAC 58.279 52.381 0.00 0.00 0.00 3.18
8817 13241 2.308275 AGTACTACTCCCTCCGTTCACT 59.692 50.000 0.00 0.00 0.00 3.41
8818 13242 2.305858 ACTACTCCCTCCGTTCACTT 57.694 50.000 0.00 0.00 0.00 3.16
8819 13243 2.606378 ACTACTCCCTCCGTTCACTTT 58.394 47.619 0.00 0.00 0.00 2.66
8820 13244 2.970640 ACTACTCCCTCCGTTCACTTTT 59.029 45.455 0.00 0.00 0.00 2.27
8821 13245 4.154942 ACTACTCCCTCCGTTCACTTTTA 58.845 43.478 0.00 0.00 0.00 1.52
8822 13246 4.776308 ACTACTCCCTCCGTTCACTTTTAT 59.224 41.667 0.00 0.00 0.00 1.40
8823 13247 5.954150 ACTACTCCCTCCGTTCACTTTTATA 59.046 40.000 0.00 0.00 0.00 0.98
8824 13248 5.750352 ACTCCCTCCGTTCACTTTTATAA 57.250 39.130 0.00 0.00 0.00 0.98
8825 13249 5.731591 ACTCCCTCCGTTCACTTTTATAAG 58.268 41.667 0.00 0.00 37.40 1.73
8826 13250 5.247792 ACTCCCTCCGTTCACTTTTATAAGT 59.752 40.000 0.00 0.00 45.40 2.24
8827 13251 5.727434 TCCCTCCGTTCACTTTTATAAGTC 58.273 41.667 0.00 0.00 42.67 3.01
8828 13252 4.874396 CCCTCCGTTCACTTTTATAAGTCC 59.126 45.833 0.00 0.00 42.67 3.85
8829 13253 5.338137 CCCTCCGTTCACTTTTATAAGTCCT 60.338 44.000 0.00 0.00 42.67 3.85
8830 13254 6.171213 CCTCCGTTCACTTTTATAAGTCCTT 58.829 40.000 0.00 0.00 42.67 3.36
8831 13255 6.653740 CCTCCGTTCACTTTTATAAGTCCTTT 59.346 38.462 0.00 0.00 42.67 3.11
8832 13256 7.148457 CCTCCGTTCACTTTTATAAGTCCTTTC 60.148 40.741 0.00 0.00 42.67 2.62
8833 13257 7.218614 TCCGTTCACTTTTATAAGTCCTTTCA 58.781 34.615 0.00 0.00 42.67 2.69
8834 13258 7.386848 TCCGTTCACTTTTATAAGTCCTTTCAG 59.613 37.037 0.00 0.00 42.67 3.02
8835 13259 7.386848 CCGTTCACTTTTATAAGTCCTTTCAGA 59.613 37.037 0.00 0.00 42.67 3.27
8836 13260 8.221766 CGTTCACTTTTATAAGTCCTTTCAGAC 58.778 37.037 0.00 0.00 42.67 3.51
8837 13261 9.052759 GTTCACTTTTATAAGTCCTTTCAGACA 57.947 33.333 0.00 0.00 42.67 3.41
8838 13262 8.833231 TCACTTTTATAAGTCCTTTCAGACAG 57.167 34.615 0.00 0.00 42.67 3.51
8839 13263 7.387948 TCACTTTTATAAGTCCTTTCAGACAGC 59.612 37.037 0.00 0.00 42.67 4.40
8840 13264 7.389053 CACTTTTATAAGTCCTTTCAGACAGCT 59.611 37.037 0.00 0.00 42.67 4.24
8841 13265 7.604545 ACTTTTATAAGTCCTTTCAGACAGCTC 59.395 37.037 0.00 0.00 40.60 4.09
8842 13266 6.605471 TTATAAGTCCTTTCAGACAGCTCA 57.395 37.500 0.00 0.00 39.34 4.26
8843 13267 3.845781 AAGTCCTTTCAGACAGCTCAA 57.154 42.857 0.00 0.00 39.34 3.02
8844 13268 3.845781 AGTCCTTTCAGACAGCTCAAA 57.154 42.857 0.00 0.00 39.34 2.69
8845 13269 4.156455 AGTCCTTTCAGACAGCTCAAAA 57.844 40.909 0.00 0.00 39.34 2.44
8846 13270 4.723309 AGTCCTTTCAGACAGCTCAAAAT 58.277 39.130 0.00 0.00 39.34 1.82
8847 13271 5.869579 AGTCCTTTCAGACAGCTCAAAATA 58.130 37.500 0.00 0.00 39.34 1.40
8848 13272 5.936956 AGTCCTTTCAGACAGCTCAAAATAG 59.063 40.000 0.00 0.00 39.34 1.73
8849 13273 5.123027 GTCCTTTCAGACAGCTCAAAATAGG 59.877 44.000 0.00 0.00 36.73 2.57
8850 13274 4.142513 CCTTTCAGACAGCTCAAAATAGGC 60.143 45.833 0.00 0.00 0.00 3.93
8851 13275 3.988976 TCAGACAGCTCAAAATAGGCT 57.011 42.857 0.00 0.00 36.70 4.58
8858 13282 3.676646 CAGCTCAAAATAGGCTGTTTTGC 59.323 43.478 32.24 25.11 45.59 3.68
8859 13283 3.321682 AGCTCAAAATAGGCTGTTTTGCA 59.678 39.130 32.24 23.09 43.04 4.08
8860 13284 3.429881 GCTCAAAATAGGCTGTTTTGCAC 59.570 43.478 32.24 24.89 43.04 4.57
8861 13285 4.619973 CTCAAAATAGGCTGTTTTGCACA 58.380 39.130 32.24 20.43 43.04 4.57
8862 13286 5.212532 TCAAAATAGGCTGTTTTGCACAT 57.787 34.783 32.24 7.40 43.04 3.21
8863 13287 5.609423 TCAAAATAGGCTGTTTTGCACATT 58.391 33.333 32.24 6.77 43.04 2.71
8864 13288 5.466058 TCAAAATAGGCTGTTTTGCACATTG 59.534 36.000 32.24 16.60 43.04 2.82
8865 13289 4.605640 AATAGGCTGTTTTGCACATTGT 57.394 36.364 0.00 0.00 33.76 2.71
8866 13290 2.514205 AGGCTGTTTTGCACATTGTC 57.486 45.000 0.00 0.00 33.76 3.18
8867 13291 2.034124 AGGCTGTTTTGCACATTGTCT 58.966 42.857 0.00 0.00 33.76 3.41
8868 13292 2.129607 GGCTGTTTTGCACATTGTCTG 58.870 47.619 0.00 0.00 33.76 3.51
8869 13293 2.223782 GGCTGTTTTGCACATTGTCTGA 60.224 45.455 0.00 0.00 33.76 3.27
8870 13294 3.446799 GCTGTTTTGCACATTGTCTGAA 58.553 40.909 0.00 0.00 33.76 3.02
8871 13295 3.864583 GCTGTTTTGCACATTGTCTGAAA 59.135 39.130 0.00 0.00 33.76 2.69
8872 13296 4.508861 GCTGTTTTGCACATTGTCTGAAAT 59.491 37.500 0.00 0.00 33.76 2.17
8873 13297 5.557514 GCTGTTTTGCACATTGTCTGAAATG 60.558 40.000 0.00 9.50 42.21 2.32
8875 13299 5.519566 TGTTTTGCACATTGTCTGAAATGTC 59.480 36.000 12.25 9.51 45.47 3.06
8876 13300 5.518848 TTTGCACATTGTCTGAAATGTCT 57.481 34.783 12.25 0.00 45.47 3.41
8877 13301 5.518848 TTGCACATTGTCTGAAATGTCTT 57.481 34.783 12.25 0.00 45.47 3.01
8878 13302 5.518848 TGCACATTGTCTGAAATGTCTTT 57.481 34.783 12.25 0.00 45.47 2.52
8879 13303 6.631971 TGCACATTGTCTGAAATGTCTTTA 57.368 33.333 12.25 2.24 45.47 1.85
8880 13304 7.036996 TGCACATTGTCTGAAATGTCTTTAA 57.963 32.000 12.25 0.00 45.47 1.52
8881 13305 7.140705 TGCACATTGTCTGAAATGTCTTTAAG 58.859 34.615 12.25 0.00 45.47 1.85
8882 13306 6.583806 GCACATTGTCTGAAATGTCTTTAAGG 59.416 38.462 12.25 4.96 45.47 2.69
8883 13307 7.651808 CACATTGTCTGAAATGTCTTTAAGGT 58.348 34.615 12.25 0.00 45.47 3.50
8884 13308 7.805071 CACATTGTCTGAAATGTCTTTAAGGTC 59.195 37.037 12.25 0.00 45.47 3.85
8885 13309 7.721399 ACATTGTCTGAAATGTCTTTAAGGTCT 59.279 33.333 10.41 0.00 45.47 3.85
8886 13310 8.571336 CATTGTCTGAAATGTCTTTAAGGTCTT 58.429 33.333 0.00 0.00 33.65 3.01
8887 13311 9.793259 ATTGTCTGAAATGTCTTTAAGGTCTTA 57.207 29.630 0.00 0.00 0.00 2.10
8888 13312 9.793259 TTGTCTGAAATGTCTTTAAGGTCTTAT 57.207 29.630 0.00 0.00 0.00 1.73
8903 13327 9.720769 TTAAGGTCTTATAAAAGTGAACAGAGG 57.279 33.333 0.00 0.00 34.13 3.69
8904 13328 7.317722 AGGTCTTATAAAAGTGAACAGAGGT 57.682 36.000 0.00 0.00 34.13 3.85
8905 13329 8.431910 AGGTCTTATAAAAGTGAACAGAGGTA 57.568 34.615 0.00 0.00 34.13 3.08
8906 13330 8.532819 AGGTCTTATAAAAGTGAACAGAGGTAG 58.467 37.037 0.00 0.00 34.13 3.18
8907 13331 8.312564 GGTCTTATAAAAGTGAACAGAGGTAGT 58.687 37.037 0.00 0.00 34.13 2.73
8919 13343 8.248945 GTGAACAGAGGTAGTAGTTAATTAGCA 58.751 37.037 1.97 0.00 0.00 3.49
8963 13387 1.073923 ACACTCAATGTTCCCCTCACC 59.926 52.381 0.00 0.00 38.98 4.02
8971 13395 2.131854 TGTTCCCCTCACCAGAAAAGA 58.868 47.619 0.00 0.00 0.00 2.52
8972 13396 2.716424 TGTTCCCCTCACCAGAAAAGAT 59.284 45.455 0.00 0.00 0.00 2.40
8976 13400 4.918588 TCCCCTCACCAGAAAAGATAAAC 58.081 43.478 0.00 0.00 0.00 2.01
8987 13411 4.396166 AGAAAAGATAAACAGCGGGACATG 59.604 41.667 0.00 0.00 0.00 3.21
8990 13414 0.751643 ATAAACAGCGGGACATGGCC 60.752 55.000 10.00 10.00 0.00 5.36
8999 13423 3.866582 GACATGGCCCCCTCCTCG 61.867 72.222 0.00 0.00 0.00 4.63
9000 13424 4.741239 ACATGGCCCCCTCCTCGT 62.741 66.667 0.00 0.00 0.00 4.18
9001 13425 3.866582 CATGGCCCCCTCCTCGTC 61.867 72.222 0.00 0.00 0.00 4.20
9019 13449 0.327924 TCCCGAGAACGTACCCTGTA 59.672 55.000 0.00 0.00 37.88 2.74
9023 13453 1.135575 CGAGAACGTACCCTGTACACC 60.136 57.143 0.00 0.00 34.56 4.16
9061 13491 5.352293 GCTTTTGGGCCATTAGATGAAAAAG 59.648 40.000 7.26 11.96 36.77 2.27
9065 13495 4.183865 GGGCCATTAGATGAAAAAGCAAC 58.816 43.478 4.39 0.00 0.00 4.17
9114 13544 8.751242 GGACTATAACAATCTTATACTCCCTCC 58.249 40.741 0.00 0.00 0.00 4.30
9138 13568 8.382130 TCCGTTTTTATTTACTGCACGTATTAG 58.618 33.333 0.00 0.00 0.00 1.73
9152 13582 5.350640 GCACGTATTAGCTTTGACCTAAGTT 59.649 40.000 0.00 0.00 0.00 2.66
9204 13634 6.741109 TCGAGAACAATCTACACTTACACAA 58.259 36.000 0.00 0.00 35.54 3.33
9205 13635 7.375834 TCGAGAACAATCTACACTTACACAAT 58.624 34.615 0.00 0.00 35.54 2.71
9372 13802 5.246307 AGAAAGTTTGACCCGAGATAAAGG 58.754 41.667 0.00 0.00 0.00 3.11
9386 13816 7.228706 CCCGAGATAAAGGTAATATGCAAAGTT 59.771 37.037 0.00 0.00 0.00 2.66
9407 13837 9.516546 AAAGTTAATAAAAGTGGAGGAAGTAGG 57.483 33.333 0.00 0.00 0.00 3.18
9458 13888 0.990282 CACTCCACATCCCATCCCCT 60.990 60.000 0.00 0.00 0.00 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 4.962836 CATCCCCCATCCAGCCGC 62.963 72.222 0.00 0.00 0.00 6.53
45 46 4.275508 CCATCCCCCATCCAGCCG 62.276 72.222 0.00 0.00 0.00 5.52
46 47 3.907130 CCCATCCCCCATCCAGCC 61.907 72.222 0.00 0.00 0.00 4.85
47 48 2.778278 TCCCATCCCCCATCCAGC 60.778 66.667 0.00 0.00 0.00 4.85
48 49 0.995675 AACTCCCATCCCCCATCCAG 60.996 60.000 0.00 0.00 0.00 3.86
49 50 1.086565 AACTCCCATCCCCCATCCA 59.913 57.895 0.00 0.00 0.00 3.41
50 51 1.538666 CAACTCCCATCCCCCATCC 59.461 63.158 0.00 0.00 0.00 3.51
51 52 1.152673 GCAACTCCCATCCCCCATC 60.153 63.158 0.00 0.00 0.00 3.51
52 53 3.018901 GCAACTCCCATCCCCCAT 58.981 61.111 0.00 0.00 0.00 4.00
53 54 3.727258 CGCAACTCCCATCCCCCA 61.727 66.667 0.00 0.00 0.00 4.96
54 55 3.406595 CTCGCAACTCCCATCCCCC 62.407 68.421 0.00 0.00 0.00 5.40
55 56 2.190578 CTCGCAACTCCCATCCCC 59.809 66.667 0.00 0.00 0.00 4.81
56 57 2.514824 GCTCGCAACTCCCATCCC 60.515 66.667 0.00 0.00 0.00 3.85
57 58 2.892425 CGCTCGCAACTCCCATCC 60.892 66.667 0.00 0.00 0.00 3.51
58 59 1.880340 CTCGCTCGCAACTCCCATC 60.880 63.158 0.00 0.00 0.00 3.51
59 60 2.185350 CTCGCTCGCAACTCCCAT 59.815 61.111 0.00 0.00 0.00 4.00
60 61 4.742201 GCTCGCTCGCAACTCCCA 62.742 66.667 0.00 0.00 0.00 4.37
83 84 1.366111 TTATTTGCTGCGTCCGCTCC 61.366 55.000 13.31 4.42 42.51 4.70
84 85 0.026803 CTTATTTGCTGCGTCCGCTC 59.973 55.000 13.31 5.51 42.51 5.03
85 86 1.982073 GCTTATTTGCTGCGTCCGCT 61.982 55.000 13.31 0.00 42.51 5.52
86 87 1.583709 GCTTATTTGCTGCGTCCGC 60.584 57.895 4.42 4.42 42.35 5.54
87 88 1.296867 CGCTTATTTGCTGCGTCCG 60.297 57.895 0.00 0.00 44.00 4.79
88 89 4.670606 CGCTTATTTGCTGCGTCC 57.329 55.556 0.00 0.00 44.00 4.79
92 93 2.951227 GCGCCGCTTATTTGCTGC 60.951 61.111 0.00 0.00 39.28 5.25
93 94 2.648724 CGCGCCGCTTATTTGCTG 60.649 61.111 7.78 0.00 0.00 4.41
104 105 4.147322 AAACTCAATCGCGCGCCG 62.147 61.111 27.95 20.60 38.61 6.46
105 106 2.276680 GAAACTCAATCGCGCGCC 60.277 61.111 27.95 8.11 0.00 6.53
106 107 2.641663 CGAAACTCAATCGCGCGC 60.642 61.111 27.95 23.91 33.07 6.86
107 108 2.020016 CCGAAACTCAATCGCGCG 59.980 61.111 26.76 26.76 38.93 6.86
108 109 2.276680 GCCGAAACTCAATCGCGC 60.277 61.111 0.00 0.00 38.93 6.86
109 110 2.399611 GGCCGAAACTCAATCGCG 59.600 61.111 0.00 0.00 38.93 5.87
110 111 2.791927 GGGCCGAAACTCAATCGC 59.208 61.111 0.00 0.00 38.93 4.58
111 112 3.089784 CGGGCCGAAACTCAATCG 58.910 61.111 24.41 0.00 39.92 3.34
112 113 2.791927 GCGGGCCGAAACTCAATC 59.208 61.111 33.44 4.02 0.00 2.67
113 114 3.124921 CGCGGGCCGAAACTCAAT 61.125 61.111 33.44 0.00 40.02 2.57
123 124 4.143333 TAGTTCAGAGCGCGGGCC 62.143 66.667 22.01 12.63 41.24 5.80
124 125 2.886124 GTAGTTCAGAGCGCGGGC 60.886 66.667 17.92 17.92 40.37 6.13
125 126 0.384309 TATGTAGTTCAGAGCGCGGG 59.616 55.000 8.83 0.00 0.00 6.13
126 127 2.054363 CATATGTAGTTCAGAGCGCGG 58.946 52.381 8.83 0.00 0.00 6.46
127 128 1.453524 GCATATGTAGTTCAGAGCGCG 59.546 52.381 0.00 0.00 0.00 6.86
128 129 1.795286 GGCATATGTAGTTCAGAGCGC 59.205 52.381 0.00 0.00 0.00 5.92
129 130 2.054363 CGGCATATGTAGTTCAGAGCG 58.946 52.381 4.29 0.00 0.00 5.03
130 131 1.795286 GCGGCATATGTAGTTCAGAGC 59.205 52.381 4.29 0.00 0.00 4.09
131 132 2.054363 CGCGGCATATGTAGTTCAGAG 58.946 52.381 4.29 0.00 0.00 3.35
132 133 1.868109 GCGCGGCATATGTAGTTCAGA 60.868 52.381 8.83 0.00 0.00 3.27
133 134 0.508641 GCGCGGCATATGTAGTTCAG 59.491 55.000 8.83 0.00 0.00 3.02
134 135 1.212455 CGCGCGGCATATGTAGTTCA 61.212 55.000 24.84 0.00 0.00 3.18
135 136 1.487231 CGCGCGGCATATGTAGTTC 59.513 57.895 24.84 0.00 0.00 3.01
136 137 2.594962 GCGCGCGGCATATGTAGTT 61.595 57.895 33.06 0.00 42.87 2.24
137 138 3.036084 GCGCGCGGCATATGTAGT 61.036 61.111 33.06 0.00 42.87 2.73
138 139 4.121227 CGCGCGCGGCATATGTAG 62.121 66.667 43.28 13.53 43.84 2.74
167 168 2.363711 TATAGTTGCTCCAGCGGGCG 62.364 60.000 0.00 0.00 45.83 6.13
168 169 0.880718 GTATAGTTGCTCCAGCGGGC 60.881 60.000 0.00 0.00 45.83 6.13
169 170 0.249911 GGTATAGTTGCTCCAGCGGG 60.250 60.000 0.00 0.00 45.83 6.13
170 171 0.597637 CGGTATAGTTGCTCCAGCGG 60.598 60.000 0.00 0.00 45.83 5.52
171 172 0.597637 CCGGTATAGTTGCTCCAGCG 60.598 60.000 0.00 0.00 45.83 5.18
172 173 0.464452 ACCGGTATAGTTGCTCCAGC 59.536 55.000 4.49 0.00 42.50 4.85
173 174 2.550978 CAACCGGTATAGTTGCTCCAG 58.449 52.381 8.00 0.00 38.31 3.86
174 175 2.684001 CAACCGGTATAGTTGCTCCA 57.316 50.000 8.00 0.00 38.31 3.86
179 180 1.634225 CGCGCAACCGGTATAGTTG 59.366 57.895 8.00 2.39 45.92 3.16
180 181 2.169146 GCGCGCAACCGGTATAGTT 61.169 57.895 29.10 0.00 34.32 2.24
181 182 2.584143 GCGCGCAACCGGTATAGT 60.584 61.111 29.10 0.00 34.32 2.12
182 183 3.688330 CGCGCGCAACCGGTATAG 61.688 66.667 32.61 6.38 34.32 1.31
197 198 3.677099 ATTGCCCGTTTTAGCGCGC 62.677 57.895 26.66 26.66 36.35 6.86
198 199 0.731174 AAATTGCCCGTTTTAGCGCG 60.731 50.000 0.00 0.00 0.00 6.86
199 200 1.125930 CAAAATTGCCCGTTTTAGCGC 59.874 47.619 0.00 0.00 0.00 5.92
229 230 4.166011 CAGCCGCGCCAAACTAGC 62.166 66.667 0.00 0.00 0.00 3.42
230 231 2.325082 AACAGCCGCGCCAAACTAG 61.325 57.895 0.00 0.00 0.00 2.57
231 232 2.281208 AACAGCCGCGCCAAACTA 60.281 55.556 0.00 0.00 0.00 2.24
232 233 3.964875 CAACAGCCGCGCCAAACT 61.965 61.111 0.00 0.00 0.00 2.66
233 234 4.999939 CCAACAGCCGCGCCAAAC 63.000 66.667 0.00 0.00 0.00 2.93
238 239 3.869272 CATCTCCAACAGCCGCGC 61.869 66.667 0.00 0.00 0.00 6.86
239 240 3.869272 GCATCTCCAACAGCCGCG 61.869 66.667 0.00 0.00 0.00 6.46
240 241 2.437359 AGCATCTCCAACAGCCGC 60.437 61.111 0.00 0.00 0.00 6.53
241 242 3.805267 GAGCATCTCCAACAGCCG 58.195 61.111 0.00 0.00 0.00 5.52
251 252 7.787424 AAGGAGACCTTAACTATAAGAGCATCT 59.213 37.037 0.86 0.00 45.97 2.90
252 253 7.533289 AGGAGACCTTAACTATAAGAGCATC 57.467 40.000 0.00 0.00 40.90 3.91
253 254 7.015779 GGAAGGAGACCTTAACTATAAGAGCAT 59.984 40.741 2.89 0.00 44.82 3.79
254 255 6.324254 GGAAGGAGACCTTAACTATAAGAGCA 59.676 42.308 2.89 0.00 44.82 4.26
255 256 6.324254 TGGAAGGAGACCTTAACTATAAGAGC 59.676 42.308 2.89 0.00 44.82 4.09
256 257 7.342284 TGTGGAAGGAGACCTTAACTATAAGAG 59.658 40.741 2.89 0.00 44.82 2.85
257 258 7.123847 GTGTGGAAGGAGACCTTAACTATAAGA 59.876 40.741 2.89 0.00 44.82 2.10
258 259 7.093465 TGTGTGGAAGGAGACCTTAACTATAAG 60.093 40.741 2.89 0.00 44.82 1.73
259 260 6.727231 TGTGTGGAAGGAGACCTTAACTATAA 59.273 38.462 2.89 0.00 44.82 0.98
260 261 6.258354 TGTGTGGAAGGAGACCTTAACTATA 58.742 40.000 2.89 0.00 44.82 1.31
261 262 5.091552 TGTGTGGAAGGAGACCTTAACTAT 58.908 41.667 2.89 0.00 44.82 2.12
262 263 4.485875 TGTGTGGAAGGAGACCTTAACTA 58.514 43.478 2.89 0.00 44.82 2.24
263 264 3.314693 TGTGTGGAAGGAGACCTTAACT 58.685 45.455 2.89 0.00 44.82 2.24
264 265 3.323979 TCTGTGTGGAAGGAGACCTTAAC 59.676 47.826 2.89 6.08 44.82 2.01
265 266 3.323979 GTCTGTGTGGAAGGAGACCTTAA 59.676 47.826 2.89 0.00 44.82 1.85
266 267 2.897969 GTCTGTGTGGAAGGAGACCTTA 59.102 50.000 2.89 0.00 44.82 2.69
268 269 1.343069 GTCTGTGTGGAAGGAGACCT 58.657 55.000 0.00 0.00 33.87 3.85
269 270 0.038159 CGTCTGTGTGGAAGGAGACC 60.038 60.000 0.00 0.00 32.75 3.85
270 271 0.667792 GCGTCTGTGTGGAAGGAGAC 60.668 60.000 0.00 0.00 32.99 3.36
271 272 1.112916 TGCGTCTGTGTGGAAGGAGA 61.113 55.000 0.00 0.00 0.00 3.71
272 273 0.036952 ATGCGTCTGTGTGGAAGGAG 60.037 55.000 0.00 0.00 0.00 3.69
273 274 0.037326 GATGCGTCTGTGTGGAAGGA 60.037 55.000 0.00 0.00 0.00 3.36
274 275 1.354337 CGATGCGTCTGTGTGGAAGG 61.354 60.000 4.05 0.00 0.00 3.46
275 276 0.667487 ACGATGCGTCTGTGTGGAAG 60.667 55.000 4.05 0.00 33.69 3.46
276 277 1.365999 ACGATGCGTCTGTGTGGAA 59.634 52.632 4.05 0.00 33.69 3.53
277 278 3.047735 ACGATGCGTCTGTGTGGA 58.952 55.556 4.05 0.00 33.69 4.02
286 287 0.999406 CAGAATTTCCGACGATGCGT 59.001 50.000 0.00 0.00 45.10 5.24
287 288 1.277326 TCAGAATTTCCGACGATGCG 58.723 50.000 0.00 0.00 0.00 4.73
288 289 3.557595 AGATTCAGAATTTCCGACGATGC 59.442 43.478 0.00 0.00 0.00 3.91
289 290 5.046529 AGAGATTCAGAATTTCCGACGATG 58.953 41.667 9.57 0.00 0.00 3.84
290 291 5.269505 AGAGATTCAGAATTTCCGACGAT 57.730 39.130 9.57 0.00 0.00 3.73
291 292 4.720649 AGAGATTCAGAATTTCCGACGA 57.279 40.909 9.57 0.00 0.00 4.20
292 293 4.740695 GGTAGAGATTCAGAATTTCCGACG 59.259 45.833 9.57 0.00 0.00 5.12
293 294 5.908341 AGGTAGAGATTCAGAATTTCCGAC 58.092 41.667 9.57 8.34 0.00 4.79
294 295 6.834451 AGTAGGTAGAGATTCAGAATTTCCGA 59.166 38.462 9.57 0.00 0.00 4.55
295 296 7.045126 AGTAGGTAGAGATTCAGAATTTCCG 57.955 40.000 9.57 0.00 0.00 4.30
323 324 9.588096 AGGTGAAATAGAAACCTTACATTCTTT 57.412 29.630 0.00 0.00 41.65 2.52
333 334 6.010850 GGGAAGAAAGGTGAAATAGAAACCT 58.989 40.000 0.00 0.00 46.40 3.50
334 335 5.773176 TGGGAAGAAAGGTGAAATAGAAACC 59.227 40.000 0.00 0.00 0.00 3.27
335 336 6.294564 GGTGGGAAGAAAGGTGAAATAGAAAC 60.295 42.308 0.00 0.00 0.00 2.78
336 337 5.773176 GGTGGGAAGAAAGGTGAAATAGAAA 59.227 40.000 0.00 0.00 0.00 2.52
337 338 5.163034 TGGTGGGAAGAAAGGTGAAATAGAA 60.163 40.000 0.00 0.00 0.00 2.10
338 339 4.352595 TGGTGGGAAGAAAGGTGAAATAGA 59.647 41.667 0.00 0.00 0.00 1.98
339 340 4.459337 GTGGTGGGAAGAAAGGTGAAATAG 59.541 45.833 0.00 0.00 0.00 1.73
340 341 4.403734 GTGGTGGGAAGAAAGGTGAAATA 58.596 43.478 0.00 0.00 0.00 1.40
341 342 3.230976 GTGGTGGGAAGAAAGGTGAAAT 58.769 45.455 0.00 0.00 0.00 2.17
342 343 2.661718 GTGGTGGGAAGAAAGGTGAAA 58.338 47.619 0.00 0.00 0.00 2.69
343 344 1.133606 GGTGGTGGGAAGAAAGGTGAA 60.134 52.381 0.00 0.00 0.00 3.18
344 345 0.476771 GGTGGTGGGAAGAAAGGTGA 59.523 55.000 0.00 0.00 0.00 4.02
345 346 0.539669 GGGTGGTGGGAAGAAAGGTG 60.540 60.000 0.00 0.00 0.00 4.00
346 347 0.701310 AGGGTGGTGGGAAGAAAGGT 60.701 55.000 0.00 0.00 0.00 3.50
347 348 0.482887 AAGGGTGGTGGGAAGAAAGG 59.517 55.000 0.00 0.00 0.00 3.11
348 349 1.144913 TGAAGGGTGGTGGGAAGAAAG 59.855 52.381 0.00 0.00 0.00 2.62
349 350 1.227249 TGAAGGGTGGTGGGAAGAAA 58.773 50.000 0.00 0.00 0.00 2.52
350 351 1.354368 GATGAAGGGTGGTGGGAAGAA 59.646 52.381 0.00 0.00 0.00 2.52
351 352 0.991920 GATGAAGGGTGGTGGGAAGA 59.008 55.000 0.00 0.00 0.00 2.87
352 353 0.034089 GGATGAAGGGTGGTGGGAAG 60.034 60.000 0.00 0.00 0.00 3.46
353 354 0.774096 TGGATGAAGGGTGGTGGGAA 60.774 55.000 0.00 0.00 0.00 3.97
354 355 0.774096 TTGGATGAAGGGTGGTGGGA 60.774 55.000 0.00 0.00 0.00 4.37
355 356 0.611896 GTTGGATGAAGGGTGGTGGG 60.612 60.000 0.00 0.00 0.00 4.61
356 357 0.611896 GGTTGGATGAAGGGTGGTGG 60.612 60.000 0.00 0.00 0.00 4.61
357 358 0.405585 AGGTTGGATGAAGGGTGGTG 59.594 55.000 0.00 0.00 0.00 4.17
358 359 1.075536 GAAGGTTGGATGAAGGGTGGT 59.924 52.381 0.00 0.00 0.00 4.16
359 360 1.616994 GGAAGGTTGGATGAAGGGTGG 60.617 57.143 0.00 0.00 0.00 4.61
360 361 1.075374 TGGAAGGTTGGATGAAGGGTG 59.925 52.381 0.00 0.00 0.00 4.61
361 362 1.455822 TGGAAGGTTGGATGAAGGGT 58.544 50.000 0.00 0.00 0.00 4.34
362 363 2.291800 ACATGGAAGGTTGGATGAAGGG 60.292 50.000 0.00 0.00 0.00 3.95
363 364 3.091633 ACATGGAAGGTTGGATGAAGG 57.908 47.619 0.00 0.00 0.00 3.46
364 365 5.466728 CGTATACATGGAAGGTTGGATGAAG 59.533 44.000 3.32 0.00 28.09 3.02
365 366 5.129650 TCGTATACATGGAAGGTTGGATGAA 59.870 40.000 3.32 0.00 28.09 2.57
366 367 4.651962 TCGTATACATGGAAGGTTGGATGA 59.348 41.667 3.32 0.00 28.09 2.92
367 368 4.956085 TCGTATACATGGAAGGTTGGATG 58.044 43.478 3.32 0.00 28.09 3.51
368 369 5.825593 ATCGTATACATGGAAGGTTGGAT 57.174 39.130 3.32 0.00 28.09 3.41
369 370 6.734502 TTATCGTATACATGGAAGGTTGGA 57.265 37.500 3.32 0.00 28.09 3.53
370 371 7.158697 TGATTATCGTATACATGGAAGGTTGG 58.841 38.462 3.32 0.00 28.09 3.77
371 372 8.601845 TTGATTATCGTATACATGGAAGGTTG 57.398 34.615 3.32 0.00 28.09 3.77
372 373 9.436957 GATTGATTATCGTATACATGGAAGGTT 57.563 33.333 3.32 0.00 28.09 3.50
373 374 8.593679 TGATTGATTATCGTATACATGGAAGGT 58.406 33.333 3.32 0.00 35.94 3.50
374 375 8.873830 GTGATTGATTATCGTATACATGGAAGG 58.126 37.037 3.32 0.00 35.94 3.46
375 376 8.873830 GGTGATTGATTATCGTATACATGGAAG 58.126 37.037 3.32 0.00 35.94 3.46
376 377 8.593679 AGGTGATTGATTATCGTATACATGGAA 58.406 33.333 3.32 0.00 35.94 3.53
377 378 8.134202 AGGTGATTGATTATCGTATACATGGA 57.866 34.615 3.32 0.00 35.94 3.41
378 379 8.777865 AAGGTGATTGATTATCGTATACATGG 57.222 34.615 3.32 0.00 35.94 3.66
428 429 9.920946 TCAGGAGCTAAGTAAATTAAAATGGAT 57.079 29.630 0.00 0.00 0.00 3.41
429 430 9.396022 CTCAGGAGCTAAGTAAATTAAAATGGA 57.604 33.333 0.00 0.00 0.00 3.41
448 449 5.006386 ACTAAAGTGAAATTGGCTCAGGAG 58.994 41.667 0.00 0.00 0.00 3.69
449 450 4.985538 ACTAAAGTGAAATTGGCTCAGGA 58.014 39.130 0.00 0.00 0.00 3.86
450 451 5.712152 AACTAAAGTGAAATTGGCTCAGG 57.288 39.130 0.00 0.00 0.00 3.86
451 452 7.875971 AGTAAACTAAAGTGAAATTGGCTCAG 58.124 34.615 0.00 0.00 0.00 3.35
452 453 7.817418 AGTAAACTAAAGTGAAATTGGCTCA 57.183 32.000 0.00 0.00 0.00 4.26
453 454 9.608617 GTAAGTAAACTAAAGTGAAATTGGCTC 57.391 33.333 0.00 0.00 0.00 4.70
454 455 9.350951 AGTAAGTAAACTAAAGTGAAATTGGCT 57.649 29.630 0.00 0.00 0.00 4.75
536 537 9.678941 TGCGTTAAAAATAATGTGATTGTGTAA 57.321 25.926 0.00 0.00 0.00 2.41
537 538 9.119329 GTGCGTTAAAAATAATGTGATTGTGTA 57.881 29.630 0.00 0.00 0.00 2.90
538 539 7.149047 CGTGCGTTAAAAATAATGTGATTGTGT 60.149 33.333 0.00 0.00 0.00 3.72
539 540 7.157052 CGTGCGTTAAAAATAATGTGATTGTG 58.843 34.615 0.00 0.00 0.00 3.33
540 541 6.306837 CCGTGCGTTAAAAATAATGTGATTGT 59.693 34.615 0.00 0.00 0.00 2.71
541 542 6.237437 CCCGTGCGTTAAAAATAATGTGATTG 60.237 38.462 0.00 0.00 0.00 2.67
542 543 5.802956 CCCGTGCGTTAAAAATAATGTGATT 59.197 36.000 0.00 0.00 0.00 2.57
543 544 5.336744 CCCGTGCGTTAAAAATAATGTGAT 58.663 37.500 0.00 0.00 0.00 3.06
544 545 4.724303 CCCGTGCGTTAAAAATAATGTGA 58.276 39.130 0.00 0.00 0.00 3.58
545 546 3.302170 GCCCGTGCGTTAAAAATAATGTG 59.698 43.478 0.00 0.00 0.00 3.21
546 547 3.057456 TGCCCGTGCGTTAAAAATAATGT 60.057 39.130 0.00 0.00 41.78 2.71
547 548 3.502920 TGCCCGTGCGTTAAAAATAATG 58.497 40.909 0.00 0.00 41.78 1.90
548 549 3.851976 TGCCCGTGCGTTAAAAATAAT 57.148 38.095 0.00 0.00 41.78 1.28
549 550 3.502920 CATGCCCGTGCGTTAAAAATAA 58.497 40.909 0.00 0.00 41.78 1.40
550 551 2.159366 CCATGCCCGTGCGTTAAAAATA 60.159 45.455 0.00 0.00 41.78 1.40
551 552 1.403514 CCATGCCCGTGCGTTAAAAAT 60.404 47.619 0.00 0.00 41.78 1.82
552 553 0.039074 CCATGCCCGTGCGTTAAAAA 60.039 50.000 0.00 0.00 41.78 1.94
553 554 1.173444 ACCATGCCCGTGCGTTAAAA 61.173 50.000 0.00 0.00 41.78 1.52
554 555 1.173444 AACCATGCCCGTGCGTTAAA 61.173 50.000 0.00 0.00 41.78 1.52
555 556 1.579084 GAACCATGCCCGTGCGTTAA 61.579 55.000 0.00 0.00 41.78 2.01
556 557 2.032834 AACCATGCCCGTGCGTTA 59.967 55.556 0.00 0.00 41.78 3.18
557 558 2.457743 TAGAACCATGCCCGTGCGTT 62.458 55.000 0.00 0.00 41.78 4.84
558 559 2.852495 CTAGAACCATGCCCGTGCGT 62.852 60.000 0.00 0.00 41.78 5.24
559 560 2.125310 TAGAACCATGCCCGTGCG 60.125 61.111 0.00 0.00 41.78 5.34
560 561 0.177141 TACTAGAACCATGCCCGTGC 59.823 55.000 0.00 0.00 38.26 5.34
561 562 2.684001 TTACTAGAACCATGCCCGTG 57.316 50.000 0.00 0.00 0.00 4.94
562 563 3.454812 AGATTTACTAGAACCATGCCCGT 59.545 43.478 0.00 0.00 0.00 5.28
563 564 4.073293 AGATTTACTAGAACCATGCCCG 57.927 45.455 0.00 0.00 0.00 6.13
579 580 9.282569 GGTTCTGATGCTCATATTTCTAGATTT 57.717 33.333 0.00 0.00 0.00 2.17
580 581 8.658619 AGGTTCTGATGCTCATATTTCTAGATT 58.341 33.333 0.00 0.00 0.00 2.40
581 582 8.204903 AGGTTCTGATGCTCATATTTCTAGAT 57.795 34.615 0.00 0.00 0.00 1.98
582 583 7.609097 AGGTTCTGATGCTCATATTTCTAGA 57.391 36.000 0.00 0.00 0.00 2.43
583 584 8.363390 TGTAGGTTCTGATGCTCATATTTCTAG 58.637 37.037 0.00 0.00 0.00 2.43
584 585 8.144478 GTGTAGGTTCTGATGCTCATATTTCTA 58.856 37.037 0.00 0.00 0.00 2.10
585 586 6.989169 GTGTAGGTTCTGATGCTCATATTTCT 59.011 38.462 0.00 0.00 0.00 2.52
586 587 6.989169 AGTGTAGGTTCTGATGCTCATATTTC 59.011 38.462 0.00 0.00 0.00 2.17
587 588 6.765036 CAGTGTAGGTTCTGATGCTCATATTT 59.235 38.462 0.00 0.00 34.02 1.40
588 589 6.098838 TCAGTGTAGGTTCTGATGCTCATATT 59.901 38.462 0.00 0.00 36.04 1.28
589 590 5.600069 TCAGTGTAGGTTCTGATGCTCATAT 59.400 40.000 0.00 0.00 36.04 1.78
590 591 4.956075 TCAGTGTAGGTTCTGATGCTCATA 59.044 41.667 0.00 0.00 36.04 2.15
591 592 3.771479 TCAGTGTAGGTTCTGATGCTCAT 59.229 43.478 0.00 0.00 36.04 2.90
592 593 3.165071 TCAGTGTAGGTTCTGATGCTCA 58.835 45.455 0.00 0.00 36.04 4.26
593 594 3.876274 TCAGTGTAGGTTCTGATGCTC 57.124 47.619 0.00 0.00 36.04 4.26
598 599 4.407365 TCAGTCATCAGTGTAGGTTCTGA 58.593 43.478 0.00 0.00 43.38 3.27
599 600 4.790765 TCAGTCATCAGTGTAGGTTCTG 57.209 45.455 0.00 0.00 0.00 3.02
600 601 4.161189 CCATCAGTCATCAGTGTAGGTTCT 59.839 45.833 0.00 0.00 0.00 3.01
601 602 4.437239 CCATCAGTCATCAGTGTAGGTTC 58.563 47.826 0.00 0.00 0.00 3.62
602 603 3.198635 CCCATCAGTCATCAGTGTAGGTT 59.801 47.826 0.00 0.00 0.00 3.50
603 604 2.768527 CCCATCAGTCATCAGTGTAGGT 59.231 50.000 0.00 0.00 0.00 3.08
604 605 2.768527 ACCCATCAGTCATCAGTGTAGG 59.231 50.000 0.00 0.00 0.00 3.18
605 606 4.186926 CAACCCATCAGTCATCAGTGTAG 58.813 47.826 0.00 0.00 0.00 2.74
606 607 3.055167 CCAACCCATCAGTCATCAGTGTA 60.055 47.826 0.00 0.00 0.00 2.90
607 608 2.290514 CCAACCCATCAGTCATCAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
608 609 2.362736 CCAACCCATCAGTCATCAGTG 58.637 52.381 0.00 0.00 0.00 3.66
609 610 1.340405 GCCAACCCATCAGTCATCAGT 60.340 52.381 0.00 0.00 0.00 3.41
610 611 1.386533 GCCAACCCATCAGTCATCAG 58.613 55.000 0.00 0.00 0.00 2.90
611 612 0.392863 CGCCAACCCATCAGTCATCA 60.393 55.000 0.00 0.00 0.00 3.07
612 613 1.097547 CCGCCAACCCATCAGTCATC 61.098 60.000 0.00 0.00 0.00 2.92
613 614 1.077501 CCGCCAACCCATCAGTCAT 60.078 57.895 0.00 0.00 0.00 3.06
614 615 2.350895 CCGCCAACCCATCAGTCA 59.649 61.111 0.00 0.00 0.00 3.41
615 616 1.745489 GACCGCCAACCCATCAGTC 60.745 63.158 0.00 0.00 0.00 3.51
616 617 1.852157 ATGACCGCCAACCCATCAGT 61.852 55.000 0.00 0.00 0.00 3.41
617 618 0.680921 AATGACCGCCAACCCATCAG 60.681 55.000 0.00 0.00 0.00 2.90
618 619 0.679640 GAATGACCGCCAACCCATCA 60.680 55.000 0.00 0.00 0.00 3.07
619 620 0.394352 AGAATGACCGCCAACCCATC 60.394 55.000 0.00 0.00 0.00 3.51
620 621 0.039618 AAGAATGACCGCCAACCCAT 59.960 50.000 0.00 0.00 0.00 4.00
621 622 0.178975 AAAGAATGACCGCCAACCCA 60.179 50.000 0.00 0.00 0.00 4.51
622 623 0.966179 AAAAGAATGACCGCCAACCC 59.034 50.000 0.00 0.00 0.00 4.11
623 624 1.886542 AGAAAAGAATGACCGCCAACC 59.113 47.619 0.00 0.00 0.00 3.77
624 625 3.643159 AAGAAAAGAATGACCGCCAAC 57.357 42.857 0.00 0.00 0.00 3.77
629 630 6.060028 TGTTCAGAAAGAAAAGAATGACCG 57.940 37.500 0.00 0.00 38.13 4.79
647 648 6.061441 ACCACAGACTGATAATGTTTGTTCA 58.939 36.000 10.08 0.00 31.69 3.18
667 668 2.327940 GCAGCACGACACAACCAC 59.672 61.111 0.00 0.00 0.00 4.16
681 682 4.876125 AGAGTGTATATGATCCAACGCAG 58.124 43.478 0.00 0.00 0.00 5.18
685 686 9.509855 GATCGAATAGAGTGTATATGATCCAAC 57.490 37.037 9.08 0.00 0.00 3.77
746 747 8.859517 TTGATCACGAACGACAAATACATATA 57.140 30.769 0.00 0.00 0.00 0.86
747 748 7.764695 TTGATCACGAACGACAAATACATAT 57.235 32.000 0.00 0.00 0.00 1.78
748 749 7.305763 CGATTGATCACGAACGACAAATACATA 60.306 37.037 0.00 0.00 0.00 2.29
749 750 6.507929 CGATTGATCACGAACGACAAATACAT 60.508 38.462 0.00 0.00 0.00 2.29
750 751 5.220135 CGATTGATCACGAACGACAAATACA 60.220 40.000 0.00 0.00 0.00 2.29
758 761 1.388768 GTTGCGATTGATCACGAACGA 59.611 47.619 9.68 0.00 0.00 3.85
1171 1194 1.229082 AACTCACCGGGCTAGGACA 60.229 57.895 6.32 0.00 34.73 4.02
1196 1219 2.198827 AAATCATGTCCCTGCGAACA 57.801 45.000 0.00 0.00 0.00 3.18
1201 1224 5.471456 AGATCGAATAAAATCATGTCCCTGC 59.529 40.000 0.00 0.00 0.00 4.85
1209 1232 9.703892 CTCTAGGAACAGATCGAATAAAATCAT 57.296 33.333 0.00 0.00 0.00 2.45
1210 1233 8.144478 CCTCTAGGAACAGATCGAATAAAATCA 58.856 37.037 0.00 0.00 37.39 2.57
1212 1235 8.251383 TCCTCTAGGAACAGATCGAATAAAAT 57.749 34.615 0.00 0.00 42.18 1.82
1213 1236 7.655521 TCCTCTAGGAACAGATCGAATAAAA 57.344 36.000 0.00 0.00 42.18 1.52
1231 1257 1.494721 GCCAATCCACCCATTCCTCTA 59.505 52.381 0.00 0.00 0.00 2.43
1234 1260 0.712380 AAGCCAATCCACCCATTCCT 59.288 50.000 0.00 0.00 0.00 3.36
1259 1285 2.352715 CGGGAGAAAATTTTCCACCTGC 60.353 50.000 28.04 17.20 37.92 4.85
1270 1296 1.463674 GCACATGACCGGGAGAAAAT 58.536 50.000 6.32 0.00 0.00 1.82
1373 1399 1.134946 GATGCAATGTGTGGTAAGGCC 59.865 52.381 0.00 0.00 37.90 5.19
1421 1447 5.588246 ACTGTATTTGTGTCACAATGTCACA 59.412 36.000 18.83 16.76 42.76 3.58
1422 1448 6.060028 ACTGTATTTGTGTCACAATGTCAC 57.940 37.500 18.83 13.67 38.00 3.67
1423 1449 6.763610 TGTACTGTATTTGTGTCACAATGTCA 59.236 34.615 18.83 15.22 38.00 3.58
1424 1450 7.042051 AGTGTACTGTATTTGTGTCACAATGTC 60.042 37.037 18.83 11.95 38.00 3.06
1425 1451 6.765989 AGTGTACTGTATTTGTGTCACAATGT 59.234 34.615 18.83 12.97 38.00 2.71
1426 1452 7.071414 CAGTGTACTGTATTTGTGTCACAATG 58.929 38.462 18.83 6.24 37.28 2.82
1571 1601 9.693739 CTCCAAGTAGATCATGTACTCCTATAT 57.306 37.037 0.00 0.00 30.11 0.86
1572 1602 8.670490 ACTCCAAGTAGATCATGTACTCCTATA 58.330 37.037 0.00 0.00 30.11 1.31
1573 1603 7.531317 ACTCCAAGTAGATCATGTACTCCTAT 58.469 38.462 0.00 0.00 30.11 2.57
1574 1604 6.912426 ACTCCAAGTAGATCATGTACTCCTA 58.088 40.000 0.00 0.00 30.11 2.94
1575 1605 5.772004 ACTCCAAGTAGATCATGTACTCCT 58.228 41.667 0.00 0.00 30.11 3.69
2017 2056 1.713033 CGCGTCGTCAACAACAACG 60.713 57.895 0.00 0.00 40.17 4.10
2104 2145 3.312504 CGTCCGTCTACGCATGCG 61.313 66.667 36.79 36.79 46.03 4.73
3001 4990 3.532155 GGCCTCATCGCGGACTCT 61.532 66.667 6.13 0.00 0.00 3.24
3075 5306 3.402681 CCTGCATCACCCCGACCT 61.403 66.667 0.00 0.00 0.00 3.85
4065 6305 3.445096 AGCAGCCAAATTCAGTGTTATCC 59.555 43.478 0.00 0.00 0.00 2.59
4399 6756 6.676950 TGAACATGTGTTGTGATTGGATTAC 58.323 36.000 0.00 0.00 38.99 1.89
4537 6897 7.834181 TCTCTTTCCAGACTTTTTATAATGGGG 59.166 37.037 1.64 0.00 0.00 4.96
5094 7483 5.685068 TGCACAATGACTTTTGAACGTAATG 59.315 36.000 0.00 0.00 0.00 1.90
5096 7485 5.236655 TGCACAATGACTTTTGAACGTAA 57.763 34.783 0.00 0.00 0.00 3.18
5100 7489 5.049167 TGGAATGCACAATGACTTTTGAAC 58.951 37.500 0.00 0.00 0.00 3.18
5114 7503 5.530171 ACATATGAAGATCAGTGGAATGCAC 59.470 40.000 10.38 0.00 0.00 4.57
5115 7504 5.687780 ACATATGAAGATCAGTGGAATGCA 58.312 37.500 10.38 0.00 0.00 3.96
5151 7623 4.574828 TGGCAGTTGAGACACTAGAAAAAC 59.425 41.667 0.00 0.00 0.00 2.43
5228 7700 7.680827 ACAAATCTGTATCGAGACATCTCTGTC 60.681 40.741 14.11 0.00 42.28 3.51
5351 7823 8.362860 CACATCTGTGGATATTCTACAAAGAG 57.637 38.462 2.29 0.00 37.41 2.85
5459 7931 9.515020 TGCTAACTGAAGTAAATTTGAAACTTG 57.485 29.630 9.10 0.53 33.72 3.16
5653 8127 1.052287 GCACAAAAGAAATGACGCGG 58.948 50.000 12.47 0.00 0.00 6.46
5654 8128 2.036556 AGCACAAAAGAAATGACGCG 57.963 45.000 3.53 3.53 0.00 6.01
5656 8130 2.973224 CGGAAGCACAAAAGAAATGACG 59.027 45.455 0.00 0.00 0.00 4.35
5712 8186 2.351726 GCGGTACATGCTTAACAAGGAG 59.648 50.000 0.00 0.00 30.29 3.69
5732 8206 7.604386 CGATGTGATACTATCGACATTATTGC 58.396 38.462 0.00 0.00 46.67 3.56
5770 8244 9.111519 TCATAGGGATACAGCTTATAAAATGGA 57.888 33.333 0.00 0.00 39.74 3.41
6099 8575 5.819991 AGAAGGCTTTGGTTCTCATATTCA 58.180 37.500 0.00 0.00 0.00 2.57
6209 8685 5.147162 GCCTTTAGTCACAAGAATTTGACG 58.853 41.667 3.05 0.00 45.71 4.35
6655 9131 0.253327 GGCGAAACTTCCCTCTCCAT 59.747 55.000 0.00 0.00 0.00 3.41
6975 9453 4.843728 TGGAGTGTCCAATTGTATTCTCC 58.156 43.478 20.31 20.31 45.00 3.71
7041 9519 1.067142 AGTCTGCAATGCAAATGCCTG 60.067 47.619 21.00 15.00 43.16 4.85
7075 9553 5.097742 TGGTCTGAAAATATGACGTCCAT 57.902 39.130 14.12 9.22 39.25 3.41
7086 9564 9.539194 AAGGAATTCTAGAAATGGTCTGAAAAT 57.461 29.630 9.71 0.00 37.12 1.82
7259 9738 7.242914 AGTGAGGAAAAAGTAAAGTTGTACG 57.757 36.000 0.00 0.00 0.00 3.67
7289 9768 4.142093 GCATCATTCCAACCTGCATAAACT 60.142 41.667 0.00 0.00 33.13 2.66
7435 9914 1.949799 AGCTCCTCAGGTGAAGTGAT 58.050 50.000 0.00 0.00 0.00 3.06
7555 10035 6.546034 CCCTACAAACTGAATAAGGGTTATGG 59.454 42.308 0.00 0.00 39.11 2.74
7566 10159 4.600111 TGTTACCCTCCCTACAAACTGAAT 59.400 41.667 0.00 0.00 0.00 2.57
7576 10169 3.502051 ATCCAAGTGTTACCCTCCCTA 57.498 47.619 0.00 0.00 0.00 3.53
7753 10346 1.530323 ACAAATAACGCCTGTGTCCC 58.470 50.000 0.00 0.00 0.00 4.46
7801 10394 6.599638 AGAGTAGCACCATTTTCTGTTTATCC 59.400 38.462 0.00 0.00 0.00 2.59
7809 10402 5.376625 TGTCAAAGAGTAGCACCATTTTCT 58.623 37.500 0.00 0.00 0.00 2.52
7859 10452 4.082354 ACTTAGACATGTCGGGTAACAGTC 60.082 45.833 19.85 0.00 39.74 3.51
7862 10455 3.615592 GCACTTAGACATGTCGGGTAACA 60.616 47.826 19.85 0.14 39.74 2.41
7866 10459 0.973632 TGCACTTAGACATGTCGGGT 59.026 50.000 19.85 15.89 34.09 5.28
7867 10460 1.359848 GTGCACTTAGACATGTCGGG 58.640 55.000 19.85 15.30 34.09 5.14
7869 10462 1.649171 GTCGTGCACTTAGACATGTCG 59.351 52.381 19.85 8.81 35.19 4.35
7872 10465 1.977188 TCGTCGTGCACTTAGACATG 58.023 50.000 16.19 3.92 34.80 3.21
7913 10506 1.934589 TATCCAGATTTGACGTGGCG 58.065 50.000 0.00 0.00 0.00 5.69
7935 10528 7.391148 TCCAAATGGAAACTAGCTAAATGTC 57.609 36.000 0.00 0.00 42.18 3.06
8064 10660 4.160439 TGGATATCAGAGGTTCTGTCACAC 59.840 45.833 4.83 0.00 44.58 3.82
8068 10664 5.606348 AGTTGGATATCAGAGGTTCTGTC 57.394 43.478 4.83 0.00 44.58 3.51
8071 10667 6.380079 AACAAGTTGGATATCAGAGGTTCT 57.620 37.500 7.96 0.00 0.00 3.01
8097 10693 2.358957 CGATCCCATCTGCAGTCAAAA 58.641 47.619 14.67 0.00 0.00 2.44
8184 10780 5.014858 GGGAGGTTGTATATCGATCCACTA 58.985 45.833 0.00 0.00 0.00 2.74
8185 10781 3.833070 GGGAGGTTGTATATCGATCCACT 59.167 47.826 0.00 0.00 0.00 4.00
8186 10782 3.367087 CGGGAGGTTGTATATCGATCCAC 60.367 52.174 0.00 1.35 0.00 4.02
8239 10835 7.767250 AAATCGGTACTCTAGATCATCATGA 57.233 36.000 0.00 0.00 0.00 3.07
8335 10937 3.366121 CGCACGATTTGGCATCTCTATAG 59.634 47.826 0.00 0.00 0.00 1.31
8336 10938 3.317150 CGCACGATTTGGCATCTCTATA 58.683 45.455 0.00 0.00 0.00 1.31
8356 10958 3.059597 GCTGGATTTCATATCGACAACCG 60.060 47.826 0.00 0.00 40.25 4.44
8420 11022 6.265196 AGGCTGTGACATATTCTGAACAAAAA 59.735 34.615 0.00 0.00 0.00 1.94
8425 11034 7.383572 CAGTATAGGCTGTGACATATTCTGAAC 59.616 40.741 0.00 0.00 35.18 3.18
8437 11046 7.614583 GGGTATTATAGTCAGTATAGGCTGTGA 59.385 40.741 0.00 0.00 37.70 3.58
8541 12964 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
8542 12965 5.269991 CTCTTATATTATGGGACGGAGGGA 58.730 45.833 0.00 0.00 0.00 4.20
8543 12966 4.141914 GCTCTTATATTATGGGACGGAGGG 60.142 50.000 0.00 0.00 0.00 4.30
8544 12967 4.440250 CGCTCTTATATTATGGGACGGAGG 60.440 50.000 0.00 0.00 0.00 4.30
8545 12968 4.158025 ACGCTCTTATATTATGGGACGGAG 59.842 45.833 0.00 0.00 0.00 4.63
8546 12969 4.084287 ACGCTCTTATATTATGGGACGGA 58.916 43.478 0.00 0.00 0.00 4.69
8547 12970 4.451629 ACGCTCTTATATTATGGGACGG 57.548 45.455 0.00 0.00 0.00 4.79
8548 12971 6.780706 AAAACGCTCTTATATTATGGGACG 57.219 37.500 0.00 0.00 0.00 4.79
8549 12972 8.068380 GTCAAAAACGCTCTTATATTATGGGAC 58.932 37.037 0.00 0.00 0.00 4.46
8550 12973 7.771361 TGTCAAAAACGCTCTTATATTATGGGA 59.229 33.333 0.00 0.00 0.00 4.37
8551 12974 7.855904 GTGTCAAAAACGCTCTTATATTATGGG 59.144 37.037 0.00 0.00 35.42 4.00
8552 12975 8.612619 AGTGTCAAAAACGCTCTTATATTATGG 58.387 33.333 0.00 0.00 45.69 2.74
8555 12978 9.865321 ACTAGTGTCAAAAACGCTCTTATATTA 57.135 29.630 0.00 0.00 45.69 0.98
8556 12979 8.656849 CACTAGTGTCAAAAACGCTCTTATATT 58.343 33.333 15.06 0.00 45.69 1.28
8557 12980 7.817962 ACACTAGTGTCAAAAACGCTCTTATAT 59.182 33.333 22.95 0.00 45.69 0.86
8558 12981 7.149973 ACACTAGTGTCAAAAACGCTCTTATA 58.850 34.615 22.95 0.00 45.69 0.98
8559 12982 5.989777 ACACTAGTGTCAAAAACGCTCTTAT 59.010 36.000 22.95 0.00 45.69 1.73
8560 12983 5.353938 ACACTAGTGTCAAAAACGCTCTTA 58.646 37.500 22.95 0.00 45.69 2.10
8561 12984 4.189231 ACACTAGTGTCAAAAACGCTCTT 58.811 39.130 22.95 0.00 45.69 2.85
8562 12985 3.793559 ACACTAGTGTCAAAAACGCTCT 58.206 40.909 22.95 0.00 45.69 4.09
8563 12986 4.743644 ACTACACTAGTGTCAAAAACGCTC 59.256 41.667 31.11 0.00 45.69 5.03
8565 12988 6.701432 ATACTACACTAGTGTCAAAAACGC 57.299 37.500 31.11 0.00 43.74 4.84
8590 13013 6.316390 CCCTCTCATAATACAAGAGCGTTTTT 59.684 38.462 0.00 0.00 36.12 1.94
8591 13014 5.817816 CCCTCTCATAATACAAGAGCGTTTT 59.182 40.000 0.00 0.00 36.12 2.43
8592 13015 5.128827 TCCCTCTCATAATACAAGAGCGTTT 59.871 40.000 0.00 0.00 36.12 3.60
8593 13016 4.649674 TCCCTCTCATAATACAAGAGCGTT 59.350 41.667 0.00 0.00 36.12 4.84
8594 13017 4.215908 TCCCTCTCATAATACAAGAGCGT 58.784 43.478 0.00 0.00 36.12 5.07
8595 13018 4.321601 CCTCCCTCTCATAATACAAGAGCG 60.322 50.000 0.00 0.00 36.12 5.03
8596 13019 4.020662 CCCTCCCTCTCATAATACAAGAGC 60.021 50.000 0.00 0.00 36.12 4.09
8597 13020 5.398236 TCCCTCCCTCTCATAATACAAGAG 58.602 45.833 0.00 0.00 36.99 2.85
8598 13021 5.103043 ACTCCCTCCCTCTCATAATACAAGA 60.103 44.000 0.00 0.00 0.00 3.02
8599 13022 5.151454 ACTCCCTCCCTCTCATAATACAAG 58.849 45.833 0.00 0.00 0.00 3.16
8600 13023 5.157770 ACTCCCTCCCTCTCATAATACAA 57.842 43.478 0.00 0.00 0.00 2.41
8601 13024 4.834406 ACTCCCTCCCTCTCATAATACA 57.166 45.455 0.00 0.00 0.00 2.29
8602 13025 5.894653 ACTACTCCCTCCCTCTCATAATAC 58.105 45.833 0.00 0.00 0.00 1.89
8603 13026 7.658887 TTACTACTCCCTCCCTCTCATAATA 57.341 40.000 0.00 0.00 0.00 0.98
8604 13027 6.547396 TTACTACTCCCTCCCTCTCATAAT 57.453 41.667 0.00 0.00 0.00 1.28
8605 13028 6.161705 TCTTTACTACTCCCTCCCTCTCATAA 59.838 42.308 0.00 0.00 0.00 1.90
8606 13029 5.675421 TCTTTACTACTCCCTCCCTCTCATA 59.325 44.000 0.00 0.00 0.00 2.15
8607 13030 4.482772 TCTTTACTACTCCCTCCCTCTCAT 59.517 45.833 0.00 0.00 0.00 2.90
8608 13031 3.856813 TCTTTACTACTCCCTCCCTCTCA 59.143 47.826 0.00 0.00 0.00 3.27
8609 13032 4.079615 ACTCTTTACTACTCCCTCCCTCTC 60.080 50.000 0.00 0.00 0.00 3.20
8610 13033 3.859859 ACTCTTTACTACTCCCTCCCTCT 59.140 47.826 0.00 0.00 0.00 3.69
8611 13034 4.254039 ACTCTTTACTACTCCCTCCCTC 57.746 50.000 0.00 0.00 0.00 4.30
8612 13035 5.707495 CATACTCTTTACTACTCCCTCCCT 58.293 45.833 0.00 0.00 0.00 4.20
8613 13036 4.281435 GCATACTCTTTACTACTCCCTCCC 59.719 50.000 0.00 0.00 0.00 4.30
8614 13037 4.894114 TGCATACTCTTTACTACTCCCTCC 59.106 45.833 0.00 0.00 0.00 4.30
8615 13038 5.508320 GCTGCATACTCTTTACTACTCCCTC 60.508 48.000 0.00 0.00 0.00 4.30
8616 13039 4.342665 GCTGCATACTCTTTACTACTCCCT 59.657 45.833 0.00 0.00 0.00 4.20
8617 13040 4.342665 AGCTGCATACTCTTTACTACTCCC 59.657 45.833 1.02 0.00 0.00 4.30
8618 13041 5.523438 AGCTGCATACTCTTTACTACTCC 57.477 43.478 1.02 0.00 0.00 3.85
8619 13042 5.751028 CCAAGCTGCATACTCTTTACTACTC 59.249 44.000 1.02 0.00 0.00 2.59
8726 13149 3.492656 GCTTGGTGTAAGAGTCACACAGA 60.493 47.826 13.88 3.25 46.53 3.41
8755 13179 7.220300 CACTAAGTCGACTGTGTAATATGAACC 59.780 40.741 20.85 0.00 0.00 3.62
8786 13210 6.594937 CGGAGGGAGTAGTACTTCTATATGTC 59.405 46.154 8.54 0.00 0.00 3.06
8803 13227 5.731591 ACTTATAAAAGTGAACGGAGGGAG 58.268 41.667 0.00 0.00 44.40 4.30
8804 13228 5.337813 GGACTTATAAAAGTGAACGGAGGGA 60.338 44.000 0.00 0.00 46.09 4.20
8805 13229 4.874396 GGACTTATAAAAGTGAACGGAGGG 59.126 45.833 0.00 0.00 46.09 4.30
8806 13230 5.731591 AGGACTTATAAAAGTGAACGGAGG 58.268 41.667 0.00 0.00 46.09 4.30
8807 13231 7.386848 TGAAAGGACTTATAAAAGTGAACGGAG 59.613 37.037 0.00 0.00 46.09 4.63
8808 13232 7.218614 TGAAAGGACTTATAAAAGTGAACGGA 58.781 34.615 0.00 0.00 46.09 4.69
8809 13233 7.386848 TCTGAAAGGACTTATAAAAGTGAACGG 59.613 37.037 0.00 0.00 46.09 4.44
8810 13234 8.221766 GTCTGAAAGGACTTATAAAAGTGAACG 58.778 37.037 0.00 0.00 46.09 3.95
8811 13235 9.052759 TGTCTGAAAGGACTTATAAAAGTGAAC 57.947 33.333 0.00 0.00 46.09 3.18
8812 13236 9.273016 CTGTCTGAAAGGACTTATAAAAGTGAA 57.727 33.333 0.00 0.00 46.09 3.18
8813 13237 7.387948 GCTGTCTGAAAGGACTTATAAAAGTGA 59.612 37.037 0.00 0.00 46.09 3.41
8814 13238 7.389053 AGCTGTCTGAAAGGACTTATAAAAGTG 59.611 37.037 0.00 0.00 46.09 3.16
8816 13240 7.604164 TGAGCTGTCTGAAAGGACTTATAAAAG 59.396 37.037 0.00 0.00 37.16 2.27
8817 13241 7.450074 TGAGCTGTCTGAAAGGACTTATAAAA 58.550 34.615 0.00 0.00 37.16 1.52
8818 13242 7.004555 TGAGCTGTCTGAAAGGACTTATAAA 57.995 36.000 0.00 0.00 37.16 1.40
8819 13243 6.605471 TGAGCTGTCTGAAAGGACTTATAA 57.395 37.500 0.00 0.00 37.16 0.98
8820 13244 6.605471 TTGAGCTGTCTGAAAGGACTTATA 57.395 37.500 0.00 0.00 37.16 0.98
8821 13245 5.489792 TTGAGCTGTCTGAAAGGACTTAT 57.510 39.130 0.00 0.00 37.16 1.73
8822 13246 4.955811 TTGAGCTGTCTGAAAGGACTTA 57.044 40.909 0.00 0.00 37.16 2.24
8823 13247 3.845781 TTGAGCTGTCTGAAAGGACTT 57.154 42.857 0.00 0.00 37.16 3.01
8824 13248 3.845781 TTTGAGCTGTCTGAAAGGACT 57.154 42.857 0.00 0.00 37.16 3.85
8825 13249 5.123027 CCTATTTTGAGCTGTCTGAAAGGAC 59.877 44.000 0.00 0.00 36.81 3.85
8826 13250 5.248640 CCTATTTTGAGCTGTCTGAAAGGA 58.751 41.667 0.00 0.00 27.62 3.36
8827 13251 4.142513 GCCTATTTTGAGCTGTCTGAAAGG 60.143 45.833 0.00 0.00 27.62 3.11
8828 13252 4.699257 AGCCTATTTTGAGCTGTCTGAAAG 59.301 41.667 0.00 0.00 34.99 2.62
8829 13253 4.655963 AGCCTATTTTGAGCTGTCTGAAA 58.344 39.130 0.00 0.00 34.99 2.69
8830 13254 4.292186 AGCCTATTTTGAGCTGTCTGAA 57.708 40.909 0.00 0.00 34.99 3.02
8831 13255 3.988976 AGCCTATTTTGAGCTGTCTGA 57.011 42.857 0.00 0.00 34.99 3.27
8837 13261 3.321682 TGCAAAACAGCCTATTTTGAGCT 59.678 39.130 12.19 0.00 45.75 4.09
8838 13262 3.429881 GTGCAAAACAGCCTATTTTGAGC 59.570 43.478 12.19 0.00 45.75 4.26
8839 13263 4.619973 TGTGCAAAACAGCCTATTTTGAG 58.380 39.130 12.19 0.00 45.75 3.02
8840 13264 4.662468 TGTGCAAAACAGCCTATTTTGA 57.338 36.364 12.19 0.00 45.75 2.69
8841 13265 5.236911 ACAATGTGCAAAACAGCCTATTTTG 59.763 36.000 3.83 3.83 45.68 2.44
8842 13266 5.367302 ACAATGTGCAAAACAGCCTATTTT 58.633 33.333 0.00 0.00 43.64 1.82
8843 13267 4.959723 ACAATGTGCAAAACAGCCTATTT 58.040 34.783 0.00 0.00 43.64 1.40
8844 13268 4.281688 AGACAATGTGCAAAACAGCCTATT 59.718 37.500 0.00 0.00 43.64 1.73
8845 13269 3.828451 AGACAATGTGCAAAACAGCCTAT 59.172 39.130 0.00 0.00 43.64 2.57
8846 13270 3.004629 CAGACAATGTGCAAAACAGCCTA 59.995 43.478 0.00 0.00 43.64 3.93
8847 13271 2.034124 AGACAATGTGCAAAACAGCCT 58.966 42.857 0.00 0.00 43.64 4.58
8848 13272 2.129607 CAGACAATGTGCAAAACAGCC 58.870 47.619 0.00 0.00 43.64 4.85
8849 13273 3.082698 TCAGACAATGTGCAAAACAGC 57.917 42.857 0.00 0.00 43.64 4.40
8850 13274 5.521010 ACATTTCAGACAATGTGCAAAACAG 59.479 36.000 0.00 0.00 44.19 3.16
8851 13275 5.417811 ACATTTCAGACAATGTGCAAAACA 58.582 33.333 0.00 0.00 44.19 2.83
8852 13276 5.750067 AGACATTTCAGACAATGTGCAAAAC 59.250 36.000 12.82 2.36 45.55 2.43
8853 13277 5.904941 AGACATTTCAGACAATGTGCAAAA 58.095 33.333 12.82 0.00 45.55 2.44
8854 13278 5.518848 AGACATTTCAGACAATGTGCAAA 57.481 34.783 12.82 0.00 45.55 3.68
8855 13279 5.518848 AAGACATTTCAGACAATGTGCAA 57.481 34.783 12.82 0.00 45.55 4.08
8856 13280 5.518848 AAAGACATTTCAGACAATGTGCA 57.481 34.783 12.82 0.00 45.55 4.57
8857 13281 6.583806 CCTTAAAGACATTTCAGACAATGTGC 59.416 38.462 12.82 7.29 45.55 4.57
8858 13282 7.651808 ACCTTAAAGACATTTCAGACAATGTG 58.348 34.615 12.82 3.62 45.55 3.21
8860 13284 8.103948 AGACCTTAAAGACATTTCAGACAATG 57.896 34.615 0.00 0.00 39.67 2.82
8861 13285 8.697507 AAGACCTTAAAGACATTTCAGACAAT 57.302 30.769 0.00 0.00 0.00 2.71
8862 13286 9.793259 ATAAGACCTTAAAGACATTTCAGACAA 57.207 29.630 0.00 0.00 0.00 3.18
8877 13301 9.720769 CCTCTGTTCACTTTTATAAGACCTTAA 57.279 33.333 0.00 0.00 35.30 1.85
8878 13302 8.877195 ACCTCTGTTCACTTTTATAAGACCTTA 58.123 33.333 0.00 0.00 35.30 2.69
8879 13303 7.746703 ACCTCTGTTCACTTTTATAAGACCTT 58.253 34.615 0.00 0.00 35.30 3.50
8880 13304 7.317722 ACCTCTGTTCACTTTTATAAGACCT 57.682 36.000 0.00 0.00 35.30 3.85
8881 13305 8.312564 ACTACCTCTGTTCACTTTTATAAGACC 58.687 37.037 0.00 0.00 35.30 3.85
8892 13316 8.468399 GCTAATTAACTACTACCTCTGTTCACT 58.532 37.037 0.00 0.00 0.00 3.41
8893 13317 8.248945 TGCTAATTAACTACTACCTCTGTTCAC 58.751 37.037 0.00 0.00 0.00 3.18
8894 13318 8.357290 TGCTAATTAACTACTACCTCTGTTCA 57.643 34.615 0.00 0.00 0.00 3.18
8904 13328 9.850628 CCGCTGTATTATGCTAATTAACTACTA 57.149 33.333 0.00 0.00 0.00 1.82
8905 13329 8.365647 ACCGCTGTATTATGCTAATTAACTACT 58.634 33.333 0.00 0.00 0.00 2.57
8906 13330 8.530269 ACCGCTGTATTATGCTAATTAACTAC 57.470 34.615 0.00 0.00 0.00 2.73
8907 13331 8.361889 TGACCGCTGTATTATGCTAATTAACTA 58.638 33.333 0.00 0.00 0.00 2.24
8908 13332 7.214381 TGACCGCTGTATTATGCTAATTAACT 58.786 34.615 0.00 0.00 0.00 2.24
8919 13343 8.898761 TGTGATAAATTTTGACCGCTGTATTAT 58.101 29.630 0.00 0.00 0.00 1.28
8928 13352 7.083858 ACATTGAGTGTGATAAATTTTGACCG 58.916 34.615 0.00 0.00 40.28 4.79
8963 13387 3.751175 TGTCCCGCTGTTTATCTTTTCTG 59.249 43.478 0.00 0.00 0.00 3.02
8971 13395 0.751643 GGCCATGTCCCGCTGTTTAT 60.752 55.000 0.00 0.00 0.00 1.40
8972 13396 1.377987 GGCCATGTCCCGCTGTTTA 60.378 57.895 0.00 0.00 0.00 2.01
8999 13423 1.246737 ACAGGGTACGTTCTCGGGAC 61.247 60.000 0.00 0.00 41.85 4.46
9000 13424 0.327924 TACAGGGTACGTTCTCGGGA 59.672 55.000 0.00 0.00 41.85 5.14
9001 13425 0.453390 GTACAGGGTACGTTCTCGGG 59.547 60.000 0.00 0.00 41.85 5.14
9002 13426 1.135575 GTGTACAGGGTACGTTCTCGG 60.136 57.143 0.00 0.00 41.85 4.63
9019 13449 1.181098 GCCATTGAAGCACCTGGTGT 61.181 55.000 26.48 9.21 35.75 4.16
9023 13453 2.409975 CAAAAGCCATTGAAGCACCTG 58.590 47.619 0.00 0.00 31.84 4.00
9061 13491 1.810151 TGACAAAATCTAGCCCGTTGC 59.190 47.619 0.00 0.00 41.71 4.17
9065 13495 5.277974 CCAACATATGACAAAATCTAGCCCG 60.278 44.000 10.38 0.00 0.00 6.13
9106 13536 4.698780 GCAGTAAATAAAAACGGAGGGAGT 59.301 41.667 0.00 0.00 0.00 3.85
9114 13544 7.901377 AGCTAATACGTGCAGTAAATAAAAACG 59.099 33.333 0.00 0.00 39.04 3.60
9291 13721 7.502226 ACATTCACGATACCAAATCAATACCAT 59.498 33.333 0.00 0.00 0.00 3.55
9345 13775 7.662604 TTATCTCGGGTCAAACTTTCTAAAC 57.337 36.000 0.00 0.00 0.00 2.01
9359 13789 5.818678 TGCATATTACCTTTATCTCGGGT 57.181 39.130 0.00 0.00 37.16 5.28
9386 13816 8.209802 TGTTCCTACTTCCTCCACTTTTATTA 57.790 34.615 0.00 0.00 0.00 0.98
9428 13858 0.888736 TGTGGAGTGCGGGTCAAATG 60.889 55.000 0.00 0.00 0.00 2.32
9433 13863 2.125106 GGATGTGGAGTGCGGGTC 60.125 66.667 0.00 0.00 0.00 4.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.