Multiple sequence alignment - TraesCS4D01G090000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G090000 chr4D 100.000 2624 0 0 1 2624 65130942 65133565 0.000000e+00 4846
1 TraesCS4D01G090000 chr3B 88.754 1974 160 25 711 2624 377671172 377673143 0.000000e+00 2359
2 TraesCS4D01G090000 chr3B 79.375 1663 263 42 1009 2624 803026828 803028457 0.000000e+00 1098
3 TraesCS4D01G090000 chr3B 91.868 787 51 8 725 1499 821727089 821726304 0.000000e+00 1086
4 TraesCS4D01G090000 chr4B 88.376 1970 156 24 725 2622 645083987 645082019 0.000000e+00 2302
5 TraesCS4D01G090000 chr4B 90.365 685 43 5 36 719 95690732 95691394 0.000000e+00 878
6 TraesCS4D01G090000 chr6D 88.259 1959 144 29 725 2624 77826260 77824329 0.000000e+00 2265
7 TraesCS4D01G090000 chr6D 94.634 205 11 0 725 929 77819833 77819629 4.210000e-83 318
8 TraesCS4D01G090000 chr2B 82.419 1951 285 35 716 2619 507795780 507797719 0.000000e+00 1650
9 TraesCS4D01G090000 chr5B 89.478 1226 96 9 725 1919 648276136 648274913 0.000000e+00 1519
10 TraesCS4D01G090000 chr5B 88.600 807 59 17 1849 2624 648274714 648273910 0.000000e+00 950
11 TraesCS4D01G090000 chr7B 81.208 1953 275 48 716 2619 598167313 598169222 0.000000e+00 1489
12 TraesCS4D01G090000 chr3D 80.855 1849 297 35 817 2624 574347910 574346078 0.000000e+00 1400
13 TraesCS4D01G090000 chr3D 81.110 1784 277 35 883 2619 61660738 61662508 0.000000e+00 1373
14 TraesCS4D01G090000 chr6B 80.398 1857 297 42 817 2624 36781561 36783399 0.000000e+00 1351
15 TraesCS4D01G090000 chr6B 82.304 842 138 8 1786 2619 707464384 707465222 0.000000e+00 719
16 TraesCS4D01G090000 chr7D 80.271 1845 302 37 817 2624 5188542 5190361 0.000000e+00 1334
17 TraesCS4D01G090000 chr1B 80.216 1855 303 38 817 2624 339716007 339714170 0.000000e+00 1334
18 TraesCS4D01G090000 chr2D 80.098 1844 293 42 817 2624 481570577 481568772 0.000000e+00 1304
19 TraesCS4D01G090000 chr2D 82.511 223 38 1 1578 1799 534417257 534417035 7.410000e-46 195


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G090000 chr4D 65130942 65133565 2623 False 4846.0 4846 100.000 1 2624 1 chr4D.!!$F1 2623
1 TraesCS4D01G090000 chr3B 377671172 377673143 1971 False 2359.0 2359 88.754 711 2624 1 chr3B.!!$F1 1913
2 TraesCS4D01G090000 chr3B 803026828 803028457 1629 False 1098.0 1098 79.375 1009 2624 1 chr3B.!!$F2 1615
3 TraesCS4D01G090000 chr3B 821726304 821727089 785 True 1086.0 1086 91.868 725 1499 1 chr3B.!!$R1 774
4 TraesCS4D01G090000 chr4B 645082019 645083987 1968 True 2302.0 2302 88.376 725 2622 1 chr4B.!!$R1 1897
5 TraesCS4D01G090000 chr4B 95690732 95691394 662 False 878.0 878 90.365 36 719 1 chr4B.!!$F1 683
6 TraesCS4D01G090000 chr6D 77824329 77826260 1931 True 2265.0 2265 88.259 725 2624 1 chr6D.!!$R2 1899
7 TraesCS4D01G090000 chr2B 507795780 507797719 1939 False 1650.0 1650 82.419 716 2619 1 chr2B.!!$F1 1903
8 TraesCS4D01G090000 chr5B 648273910 648276136 2226 True 1234.5 1519 89.039 725 2624 2 chr5B.!!$R1 1899
9 TraesCS4D01G090000 chr7B 598167313 598169222 1909 False 1489.0 1489 81.208 716 2619 1 chr7B.!!$F1 1903
10 TraesCS4D01G090000 chr3D 574346078 574347910 1832 True 1400.0 1400 80.855 817 2624 1 chr3D.!!$R1 1807
11 TraesCS4D01G090000 chr3D 61660738 61662508 1770 False 1373.0 1373 81.110 883 2619 1 chr3D.!!$F1 1736
12 TraesCS4D01G090000 chr6B 36781561 36783399 1838 False 1351.0 1351 80.398 817 2624 1 chr6B.!!$F1 1807
13 TraesCS4D01G090000 chr6B 707464384 707465222 838 False 719.0 719 82.304 1786 2619 1 chr6B.!!$F2 833
14 TraesCS4D01G090000 chr7D 5188542 5190361 1819 False 1334.0 1334 80.271 817 2624 1 chr7D.!!$F1 1807
15 TraesCS4D01G090000 chr1B 339714170 339716007 1837 True 1334.0 1334 80.216 817 2624 1 chr1B.!!$R1 1807
16 TraesCS4D01G090000 chr2D 481568772 481570577 1805 True 1304.0 1304 80.098 817 2624 1 chr2D.!!$R1 1807

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
34 35 0.031917 TAGGGACGGTTGCAGGGATA 60.032 55.0 0.00 0.0 0.00 2.59 F
1191 1627 0.032403 TTCGACGTCATGTTCCCGTT 59.968 50.0 17.16 0.0 34.51 4.44 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1203 1639 0.099082 GAGAGTAGTTGTCGGCGAGG 59.901 60.000 11.2 0.0 0.0 4.63 R
2419 3205 1.344438 AGGTGAGACGAGAACATTGCA 59.656 47.619 0.0 0.0 0.0 4.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.651361 AAGCGATCGGGCCGATAG 59.349 61.111 38.89 36.91 47.00 2.08
29 30 4.420143 CGATAGGGACGGTTGCAG 57.580 61.111 0.00 0.00 0.00 4.41
30 31 1.227263 CGATAGGGACGGTTGCAGG 60.227 63.158 0.00 0.00 0.00 4.85
31 32 1.146263 GATAGGGACGGTTGCAGGG 59.854 63.158 0.00 0.00 0.00 4.45
32 33 1.306654 ATAGGGACGGTTGCAGGGA 60.307 57.895 0.00 0.00 0.00 4.20
33 34 0.694444 ATAGGGACGGTTGCAGGGAT 60.694 55.000 0.00 0.00 0.00 3.85
34 35 0.031917 TAGGGACGGTTGCAGGGATA 60.032 55.000 0.00 0.00 0.00 2.59
51 52 2.563134 GGATATCAGTAGCCCCCTCCAT 60.563 54.545 4.83 0.00 29.89 3.41
86 87 3.345808 CGGGTGGTGCAACAGTCG 61.346 66.667 3.59 8.67 39.98 4.18
96 97 3.168528 AACAGTCGGTGGGGCAGT 61.169 61.111 0.00 0.00 0.00 4.40
104 105 2.836187 GGTGGGGCAGTTGGTACCA 61.836 63.158 11.60 11.60 0.00 3.25
110 111 0.949105 GGCAGTTGGTACCACAGTCG 60.949 60.000 16.04 2.80 0.00 4.18
111 112 0.949105 GCAGTTGGTACCACAGTCGG 60.949 60.000 16.04 7.61 0.00 4.79
131 132 2.895424 AACTTCTCCACGGGGGCAG 61.895 63.158 2.42 0.00 36.21 4.85
155 156 0.178981 CCATTGGCTGGGTCTATGGG 60.179 60.000 5.05 0.00 41.82 4.00
167 168 0.768221 TCTATGGGATGGGGCTGGTC 60.768 60.000 0.00 0.00 0.00 4.02
168 169 1.005423 TATGGGATGGGGCTGGTCA 59.995 57.895 0.00 0.00 0.00 4.02
169 170 0.403304 TATGGGATGGGGCTGGTCAT 60.403 55.000 0.00 0.00 0.00 3.06
170 171 1.723128 ATGGGATGGGGCTGGTCATC 61.723 60.000 0.00 0.00 39.08 2.92
172 173 3.666122 GATGGGGCTGGTCATCCT 58.334 61.111 0.00 0.00 35.11 3.24
173 174 1.925888 GATGGGGCTGGTCATCCTT 59.074 57.895 0.00 0.00 35.11 3.36
174 175 0.259938 GATGGGGCTGGTCATCCTTT 59.740 55.000 0.00 0.00 35.11 3.11
175 176 0.712380 ATGGGGCTGGTCATCCTTTT 59.288 50.000 0.00 0.00 34.23 2.27
176 177 0.486879 TGGGGCTGGTCATCCTTTTT 59.513 50.000 0.00 0.00 34.23 1.94
177 178 1.186200 GGGGCTGGTCATCCTTTTTC 58.814 55.000 0.00 0.00 34.23 2.29
178 179 1.272704 GGGGCTGGTCATCCTTTTTCT 60.273 52.381 0.00 0.00 34.23 2.52
179 180 1.821136 GGGCTGGTCATCCTTTTTCTG 59.179 52.381 0.00 0.00 34.23 3.02
180 181 1.821136 GGCTGGTCATCCTTTTTCTGG 59.179 52.381 0.00 0.00 34.23 3.86
181 182 1.821136 GCTGGTCATCCTTTTTCTGGG 59.179 52.381 0.00 0.00 34.23 4.45
182 183 2.819348 GCTGGTCATCCTTTTTCTGGGT 60.819 50.000 0.00 0.00 34.23 4.51
183 184 2.821969 CTGGTCATCCTTTTTCTGGGTG 59.178 50.000 0.00 0.00 37.05 4.61
184 185 1.546029 GGTCATCCTTTTTCTGGGTGC 59.454 52.381 0.00 0.00 35.75 5.01
185 186 1.546029 GTCATCCTTTTTCTGGGTGCC 59.454 52.381 0.00 0.00 35.75 5.01
186 187 1.428912 TCATCCTTTTTCTGGGTGCCT 59.571 47.619 0.00 0.00 35.75 4.75
187 188 1.547372 CATCCTTTTTCTGGGTGCCTG 59.453 52.381 0.00 0.00 0.00 4.85
188 189 0.827507 TCCTTTTTCTGGGTGCCTGC 60.828 55.000 0.00 0.00 0.00 4.85
189 190 1.286880 CTTTTTCTGGGTGCCTGCG 59.713 57.895 0.00 0.00 0.00 5.18
190 191 1.454847 TTTTTCTGGGTGCCTGCGT 60.455 52.632 0.00 0.00 0.00 5.24
191 192 1.452145 TTTTTCTGGGTGCCTGCGTC 61.452 55.000 0.00 0.00 0.00 5.19
192 193 3.842925 TTTCTGGGTGCCTGCGTCC 62.843 63.158 0.00 0.00 0.00 4.79
223 224 4.785453 GGTCGGCAAGCCTGGGAG 62.785 72.222 9.73 0.00 0.00 4.30
255 256 2.364647 GGGGGTACATCTTCCTTAGTCG 59.635 54.545 0.00 0.00 0.00 4.18
256 257 3.294214 GGGGTACATCTTCCTTAGTCGA 58.706 50.000 0.00 0.00 0.00 4.20
257 258 3.067883 GGGGTACATCTTCCTTAGTCGAC 59.932 52.174 7.70 7.70 0.00 4.20
258 259 3.952967 GGGTACATCTTCCTTAGTCGACT 59.047 47.826 23.66 23.66 0.00 4.18
259 260 4.036616 GGGTACATCTTCCTTAGTCGACTC 59.963 50.000 23.89 2.17 0.00 3.36
260 261 4.639310 GGTACATCTTCCTTAGTCGACTCA 59.361 45.833 23.89 10.80 0.00 3.41
261 262 4.974368 ACATCTTCCTTAGTCGACTCAG 57.026 45.455 23.89 20.53 0.00 3.35
262 263 3.129638 ACATCTTCCTTAGTCGACTCAGC 59.870 47.826 23.89 0.00 0.00 4.26
263 264 2.093106 TCTTCCTTAGTCGACTCAGCC 58.907 52.381 23.89 0.00 0.00 4.85
264 265 2.096248 CTTCCTTAGTCGACTCAGCCT 58.904 52.381 23.89 0.00 0.00 4.58
265 266 1.752683 TCCTTAGTCGACTCAGCCTC 58.247 55.000 23.89 0.00 0.00 4.70
266 267 1.282447 TCCTTAGTCGACTCAGCCTCT 59.718 52.381 23.89 0.00 0.00 3.69
267 268 2.504585 TCCTTAGTCGACTCAGCCTCTA 59.495 50.000 23.89 0.00 0.00 2.43
268 269 3.054582 TCCTTAGTCGACTCAGCCTCTAA 60.055 47.826 23.89 7.17 0.00 2.10
269 270 3.886505 CCTTAGTCGACTCAGCCTCTAAT 59.113 47.826 23.89 0.00 0.00 1.73
270 271 4.261405 CCTTAGTCGACTCAGCCTCTAATG 60.261 50.000 23.89 3.32 0.00 1.90
271 272 2.729194 AGTCGACTCAGCCTCTAATGT 58.271 47.619 13.58 0.00 0.00 2.71
272 273 2.685897 AGTCGACTCAGCCTCTAATGTC 59.314 50.000 13.58 0.00 0.00 3.06
273 274 1.671328 TCGACTCAGCCTCTAATGTCG 59.329 52.381 0.00 0.00 45.51 4.35
274 275 1.268794 CGACTCAGCCTCTAATGTCGG 60.269 57.143 0.00 0.00 42.06 4.79
275 276 1.751924 GACTCAGCCTCTAATGTCGGT 59.248 52.381 0.00 0.00 0.00 4.69
276 277 2.166664 GACTCAGCCTCTAATGTCGGTT 59.833 50.000 0.00 0.00 0.00 4.44
277 278 2.093973 ACTCAGCCTCTAATGTCGGTTG 60.094 50.000 0.00 0.00 0.00 3.77
278 279 2.166459 CTCAGCCTCTAATGTCGGTTGA 59.834 50.000 0.00 0.00 35.99 3.18
279 280 2.166459 TCAGCCTCTAATGTCGGTTGAG 59.834 50.000 0.00 0.00 33.87 3.02
280 281 2.093973 CAGCCTCTAATGTCGGTTGAGT 60.094 50.000 0.00 0.00 31.57 3.41
281 282 2.093973 AGCCTCTAATGTCGGTTGAGTG 60.094 50.000 0.00 0.00 0.00 3.51
282 283 2.893637 CCTCTAATGTCGGTTGAGTGG 58.106 52.381 0.00 0.00 0.00 4.00
283 284 2.496070 CCTCTAATGTCGGTTGAGTGGA 59.504 50.000 0.00 0.00 0.00 4.02
284 285 3.512680 CTCTAATGTCGGTTGAGTGGAC 58.487 50.000 0.00 0.00 0.00 4.02
285 286 2.894765 TCTAATGTCGGTTGAGTGGACA 59.105 45.455 0.00 0.00 44.00 4.02
287 288 2.859165 ATGTCGGTTGAGTGGACATT 57.141 45.000 0.36 0.00 46.23 2.71
288 289 1.877637 TGTCGGTTGAGTGGACATTG 58.122 50.000 0.00 0.00 35.89 2.82
289 290 1.156736 GTCGGTTGAGTGGACATTGG 58.843 55.000 0.00 0.00 0.00 3.16
290 291 0.762418 TCGGTTGAGTGGACATTGGT 59.238 50.000 0.00 0.00 0.00 3.67
291 292 1.156736 CGGTTGAGTGGACATTGGTC 58.843 55.000 0.00 0.00 43.55 4.02
292 293 1.270839 CGGTTGAGTGGACATTGGTCT 60.271 52.381 0.00 0.00 43.77 3.85
293 294 2.427506 GGTTGAGTGGACATTGGTCTC 58.572 52.381 0.00 0.00 43.77 3.36
294 295 2.039084 GGTTGAGTGGACATTGGTCTCT 59.961 50.000 0.00 0.00 43.77 3.10
295 296 3.496870 GGTTGAGTGGACATTGGTCTCTT 60.497 47.826 0.00 0.00 43.77 2.85
296 297 4.137543 GTTGAGTGGACATTGGTCTCTTT 58.862 43.478 0.00 0.00 43.77 2.52
297 298 4.008074 TGAGTGGACATTGGTCTCTTTC 57.992 45.455 0.00 0.00 43.77 2.62
298 299 3.244561 TGAGTGGACATTGGTCTCTTTCC 60.245 47.826 0.00 0.00 43.77 3.13
299 300 2.076863 GTGGACATTGGTCTCTTTCCG 58.923 52.381 0.00 0.00 43.77 4.30
300 301 1.974957 TGGACATTGGTCTCTTTCCGA 59.025 47.619 0.00 0.00 43.77 4.55
301 302 2.571653 TGGACATTGGTCTCTTTCCGAT 59.428 45.455 0.00 0.00 43.77 4.18
302 303 2.939103 GGACATTGGTCTCTTTCCGATG 59.061 50.000 9.76 9.76 46.64 3.84
303 304 2.939103 GACATTGGTCTCTTTCCGATGG 59.061 50.000 14.27 0.82 45.94 3.51
304 305 2.305927 ACATTGGTCTCTTTCCGATGGT 59.694 45.455 14.27 1.30 45.94 3.55
305 306 2.762535 TTGGTCTCTTTCCGATGGTC 57.237 50.000 0.00 0.00 0.00 4.02
306 307 1.938585 TGGTCTCTTTCCGATGGTCT 58.061 50.000 0.00 0.00 0.00 3.85
307 308 2.257207 TGGTCTCTTTCCGATGGTCTT 58.743 47.619 0.00 0.00 0.00 3.01
308 309 2.233922 TGGTCTCTTTCCGATGGTCTTC 59.766 50.000 0.00 0.00 0.00 2.87
309 310 2.498078 GGTCTCTTTCCGATGGTCTTCT 59.502 50.000 0.00 0.00 0.00 2.85
310 311 3.055747 GGTCTCTTTCCGATGGTCTTCTT 60.056 47.826 0.00 0.00 0.00 2.52
311 312 4.177783 GTCTCTTTCCGATGGTCTTCTTC 58.822 47.826 0.00 0.00 0.00 2.87
312 313 4.081917 GTCTCTTTCCGATGGTCTTCTTCT 60.082 45.833 0.00 0.00 0.00 2.85
313 314 4.528596 TCTCTTTCCGATGGTCTTCTTCTT 59.471 41.667 0.00 0.00 0.00 2.52
314 315 4.822026 TCTTTCCGATGGTCTTCTTCTTC 58.178 43.478 0.00 0.00 0.00 2.87
315 316 4.528596 TCTTTCCGATGGTCTTCTTCTTCT 59.471 41.667 0.00 0.00 0.00 2.85
316 317 3.876274 TCCGATGGTCTTCTTCTTCTG 57.124 47.619 0.00 0.00 0.00 3.02
317 318 2.497675 TCCGATGGTCTTCTTCTTCTGG 59.502 50.000 0.00 0.00 0.00 3.86
318 319 2.275318 CGATGGTCTTCTTCTTCTGGC 58.725 52.381 0.00 0.00 0.00 4.85
319 320 2.637947 GATGGTCTTCTTCTTCTGGCC 58.362 52.381 0.00 0.00 0.00 5.36
320 321 1.434188 TGGTCTTCTTCTTCTGGCCA 58.566 50.000 4.71 4.71 0.00 5.36
321 322 1.349026 TGGTCTTCTTCTTCTGGCCAG 59.651 52.381 27.87 27.87 0.00 4.85
322 323 1.447945 GTCTTCTTCTTCTGGCCAGC 58.552 55.000 28.91 5.87 0.00 4.85
323 324 1.059098 TCTTCTTCTTCTGGCCAGCA 58.941 50.000 28.91 17.49 0.00 4.41
324 325 1.421268 TCTTCTTCTTCTGGCCAGCAA 59.579 47.619 28.91 20.33 0.00 3.91
325 326 2.158623 TCTTCTTCTTCTGGCCAGCAAA 60.159 45.455 28.91 16.96 0.00 3.68
326 327 1.901591 TCTTCTTCTGGCCAGCAAAG 58.098 50.000 28.91 25.18 0.00 2.77
327 328 0.243095 CTTCTTCTGGCCAGCAAAGC 59.757 55.000 28.91 0.00 0.00 3.51
328 329 0.178981 TTCTTCTGGCCAGCAAAGCT 60.179 50.000 28.91 0.00 40.77 3.74
339 340 2.371658 AGCAAAGCTGGACTTTTCCT 57.628 45.000 0.00 0.00 46.73 3.36
340 341 2.670939 AGCAAAGCTGGACTTTTCCTT 58.329 42.857 0.00 0.00 46.73 3.36
341 342 3.832527 AGCAAAGCTGGACTTTTCCTTA 58.167 40.909 0.00 0.00 46.73 2.69
342 343 3.570125 AGCAAAGCTGGACTTTTCCTTAC 59.430 43.478 0.00 0.00 46.73 2.34
343 344 3.570125 GCAAAGCTGGACTTTTCCTTACT 59.430 43.478 0.00 0.00 46.73 2.24
344 345 4.557496 GCAAAGCTGGACTTTTCCTTACTG 60.557 45.833 0.00 0.00 46.73 2.74
345 346 2.784347 AGCTGGACTTTTCCTTACTGC 58.216 47.619 0.00 0.00 43.31 4.40
346 347 2.106511 AGCTGGACTTTTCCTTACTGCA 59.893 45.455 0.00 0.00 43.31 4.41
347 348 3.084786 GCTGGACTTTTCCTTACTGCAT 58.915 45.455 0.00 0.00 43.31 3.96
348 349 3.127721 GCTGGACTTTTCCTTACTGCATC 59.872 47.826 0.00 0.00 43.31 3.91
349 350 4.326826 CTGGACTTTTCCTTACTGCATCA 58.673 43.478 0.00 0.00 43.31 3.07
350 351 4.724399 TGGACTTTTCCTTACTGCATCAA 58.276 39.130 0.00 0.00 43.31 2.57
351 352 4.518970 TGGACTTTTCCTTACTGCATCAAC 59.481 41.667 0.00 0.00 43.31 3.18
352 353 4.378459 GGACTTTTCCTTACTGCATCAACG 60.378 45.833 0.00 0.00 39.13 4.10
353 354 3.502211 ACTTTTCCTTACTGCATCAACGG 59.498 43.478 0.00 0.00 0.00 4.44
354 355 3.410631 TTTCCTTACTGCATCAACGGA 57.589 42.857 0.00 0.00 0.00 4.69
355 356 2.672961 TCCTTACTGCATCAACGGAG 57.327 50.000 0.00 0.00 0.00 4.63
356 357 2.176045 TCCTTACTGCATCAACGGAGA 58.824 47.619 0.00 0.00 0.00 3.71
357 358 2.166459 TCCTTACTGCATCAACGGAGAG 59.834 50.000 0.00 0.00 0.00 3.20
358 359 2.166459 CCTTACTGCATCAACGGAGAGA 59.834 50.000 0.00 0.00 0.00 3.10
359 360 3.181471 CCTTACTGCATCAACGGAGAGAT 60.181 47.826 0.00 0.00 0.00 2.75
360 361 2.306341 ACTGCATCAACGGAGAGATG 57.694 50.000 0.00 0.00 42.78 2.90
361 362 1.827344 ACTGCATCAACGGAGAGATGA 59.173 47.619 6.60 0.00 42.63 2.92
362 363 2.200067 CTGCATCAACGGAGAGATGAC 58.800 52.381 6.60 0.00 42.63 3.06
363 364 1.550072 TGCATCAACGGAGAGATGACA 59.450 47.619 6.60 2.04 42.63 3.58
364 365 2.028203 TGCATCAACGGAGAGATGACAA 60.028 45.455 6.60 0.00 42.63 3.18
365 366 3.201290 GCATCAACGGAGAGATGACAAT 58.799 45.455 6.60 0.00 42.63 2.71
366 367 3.247173 GCATCAACGGAGAGATGACAATC 59.753 47.826 6.60 0.00 42.63 2.67
367 368 4.436332 CATCAACGGAGAGATGACAATCA 58.564 43.478 0.00 0.00 42.63 2.57
368 369 4.535526 TCAACGGAGAGATGACAATCAA 57.464 40.909 0.00 0.00 35.03 2.57
369 370 4.498241 TCAACGGAGAGATGACAATCAAG 58.502 43.478 0.00 0.00 35.03 3.02
370 371 4.220602 TCAACGGAGAGATGACAATCAAGA 59.779 41.667 0.00 0.00 35.03 3.02
371 372 4.116747 ACGGAGAGATGACAATCAAGAC 57.883 45.455 0.00 0.00 35.03 3.01
372 373 3.766591 ACGGAGAGATGACAATCAAGACT 59.233 43.478 0.00 0.00 35.03 3.24
373 374 4.221703 ACGGAGAGATGACAATCAAGACTT 59.778 41.667 0.00 0.00 35.03 3.01
374 375 4.803088 CGGAGAGATGACAATCAAGACTTC 59.197 45.833 0.00 0.00 35.03 3.01
375 376 5.623141 CGGAGAGATGACAATCAAGACTTCA 60.623 44.000 0.00 0.00 35.03 3.02
376 377 6.169094 GGAGAGATGACAATCAAGACTTCAA 58.831 40.000 0.00 0.00 35.03 2.69
377 378 6.652481 GGAGAGATGACAATCAAGACTTCAAA 59.348 38.462 0.00 0.00 35.03 2.69
378 379 7.336427 GGAGAGATGACAATCAAGACTTCAAAT 59.664 37.037 0.00 0.00 35.03 2.32
379 380 9.376075 GAGAGATGACAATCAAGACTTCAAATA 57.624 33.333 0.00 0.00 35.03 1.40
380 381 9.730705 AGAGATGACAATCAAGACTTCAAATAA 57.269 29.630 0.00 0.00 35.03 1.40
405 406 9.750125 AAATTCAACAAGATAGAAAGGAACAAC 57.250 29.630 0.00 0.00 0.00 3.32
406 407 7.873719 TTCAACAAGATAGAAAGGAACAACA 57.126 32.000 0.00 0.00 0.00 3.33
407 408 8.463930 TTCAACAAGATAGAAAGGAACAACAT 57.536 30.769 0.00 0.00 0.00 2.71
408 409 9.567776 TTCAACAAGATAGAAAGGAACAACATA 57.432 29.630 0.00 0.00 0.00 2.29
409 410 9.739276 TCAACAAGATAGAAAGGAACAACATAT 57.261 29.630 0.00 0.00 0.00 1.78
410 411 9.778993 CAACAAGATAGAAAGGAACAACATATG 57.221 33.333 0.00 0.00 0.00 1.78
411 412 7.989826 ACAAGATAGAAAGGAACAACATATGC 58.010 34.615 1.58 0.00 0.00 3.14
412 413 7.611467 ACAAGATAGAAAGGAACAACATATGCA 59.389 33.333 1.58 0.00 0.00 3.96
413 414 7.559590 AGATAGAAAGGAACAACATATGCAC 57.440 36.000 1.58 0.00 0.00 4.57
414 415 7.341805 AGATAGAAAGGAACAACATATGCACT 58.658 34.615 1.58 0.00 0.00 4.40
415 416 8.486210 AGATAGAAAGGAACAACATATGCACTA 58.514 33.333 1.58 0.00 0.00 2.74
416 417 9.109393 GATAGAAAGGAACAACATATGCACTAA 57.891 33.333 1.58 0.00 0.00 2.24
417 418 7.759489 AGAAAGGAACAACATATGCACTAAA 57.241 32.000 1.58 0.00 0.00 1.85
418 419 7.820648 AGAAAGGAACAACATATGCACTAAAG 58.179 34.615 1.58 0.00 0.00 1.85
419 420 5.567138 AGGAACAACATATGCACTAAAGC 57.433 39.130 1.58 0.00 0.00 3.51
420 421 4.399303 AGGAACAACATATGCACTAAAGCC 59.601 41.667 1.58 0.00 0.00 4.35
421 422 4.399303 GGAACAACATATGCACTAAAGCCT 59.601 41.667 1.58 0.00 0.00 4.58
422 423 5.588648 GGAACAACATATGCACTAAAGCCTA 59.411 40.000 1.58 0.00 0.00 3.93
423 424 6.436843 AACAACATATGCACTAAAGCCTAC 57.563 37.500 1.58 0.00 0.00 3.18
424 425 4.881850 ACAACATATGCACTAAAGCCTACC 59.118 41.667 1.58 0.00 0.00 3.18
425 426 4.771114 ACATATGCACTAAAGCCTACCA 57.229 40.909 1.58 0.00 0.00 3.25
426 427 4.708177 ACATATGCACTAAAGCCTACCAG 58.292 43.478 1.58 0.00 0.00 4.00
427 428 4.164221 ACATATGCACTAAAGCCTACCAGT 59.836 41.667 1.58 0.00 0.00 4.00
428 429 2.762535 TGCACTAAAGCCTACCAGTC 57.237 50.000 0.00 0.00 0.00 3.51
429 430 1.974957 TGCACTAAAGCCTACCAGTCA 59.025 47.619 0.00 0.00 0.00 3.41
430 431 2.028112 TGCACTAAAGCCTACCAGTCAG 60.028 50.000 0.00 0.00 0.00 3.51
431 432 2.233922 GCACTAAAGCCTACCAGTCAGA 59.766 50.000 0.00 0.00 0.00 3.27
432 433 3.851098 CACTAAAGCCTACCAGTCAGAC 58.149 50.000 0.00 0.00 0.00 3.51
433 434 3.511934 CACTAAAGCCTACCAGTCAGACT 59.488 47.826 0.00 0.00 0.00 3.24
434 435 4.021016 CACTAAAGCCTACCAGTCAGACTT 60.021 45.833 0.00 0.00 0.00 3.01
435 436 4.593634 ACTAAAGCCTACCAGTCAGACTTT 59.406 41.667 0.00 0.00 0.00 2.66
436 437 3.409026 AAGCCTACCAGTCAGACTTTG 57.591 47.619 0.00 0.00 0.00 2.77
437 438 1.625818 AGCCTACCAGTCAGACTTTGG 59.374 52.381 0.00 3.65 37.98 3.28
438 439 1.623811 GCCTACCAGTCAGACTTTGGA 59.376 52.381 14.42 0.00 35.89 3.53
439 440 2.038557 GCCTACCAGTCAGACTTTGGAA 59.961 50.000 14.42 0.00 35.89 3.53
440 441 3.307762 GCCTACCAGTCAGACTTTGGAAT 60.308 47.826 14.42 0.00 35.89 3.01
441 442 4.256920 CCTACCAGTCAGACTTTGGAATG 58.743 47.826 14.42 5.20 35.89 2.67
442 443 3.864789 ACCAGTCAGACTTTGGAATGT 57.135 42.857 14.42 0.00 35.89 2.71
443 444 4.170468 ACCAGTCAGACTTTGGAATGTT 57.830 40.909 14.42 0.00 35.89 2.71
444 445 4.137543 ACCAGTCAGACTTTGGAATGTTC 58.862 43.478 14.42 0.00 35.89 3.18
445 446 4.141390 ACCAGTCAGACTTTGGAATGTTCT 60.141 41.667 14.42 0.00 35.89 3.01
446 447 4.823989 CCAGTCAGACTTTGGAATGTTCTT 59.176 41.667 0.00 0.00 33.76 2.52
447 448 5.049129 CCAGTCAGACTTTGGAATGTTCTTC 60.049 44.000 0.00 0.00 33.76 2.87
448 449 5.528690 CAGTCAGACTTTGGAATGTTCTTCA 59.471 40.000 0.00 0.00 0.00 3.02
449 450 6.038603 CAGTCAGACTTTGGAATGTTCTTCAA 59.961 38.462 0.00 0.00 0.00 2.69
450 451 6.774656 AGTCAGACTTTGGAATGTTCTTCAAT 59.225 34.615 0.00 0.00 0.00 2.57
451 452 7.040823 AGTCAGACTTTGGAATGTTCTTCAATC 60.041 37.037 0.00 0.00 0.00 2.67
452 453 6.073058 TCAGACTTTGGAATGTTCTTCAATCG 60.073 38.462 0.00 0.00 0.00 3.34
453 454 5.182001 AGACTTTGGAATGTTCTTCAATCGG 59.818 40.000 0.00 0.00 0.00 4.18
454 455 4.218417 ACTTTGGAATGTTCTTCAATCGGG 59.782 41.667 0.00 0.00 0.00 5.14
455 456 2.722094 TGGAATGTTCTTCAATCGGGG 58.278 47.619 0.00 0.00 0.00 5.73
456 457 2.041081 TGGAATGTTCTTCAATCGGGGT 59.959 45.455 0.00 0.00 0.00 4.95
457 458 2.423538 GGAATGTTCTTCAATCGGGGTG 59.576 50.000 0.00 0.00 0.00 4.61
458 459 1.463674 ATGTTCTTCAATCGGGGTGC 58.536 50.000 0.00 0.00 0.00 5.01
459 460 0.953471 TGTTCTTCAATCGGGGTGCG 60.953 55.000 0.00 0.00 0.00 5.34
460 461 2.038269 TTCTTCAATCGGGGTGCGC 61.038 57.895 0.00 0.00 0.00 6.09
461 462 2.739849 TTCTTCAATCGGGGTGCGCA 62.740 55.000 5.66 5.66 0.00 6.09
462 463 2.281831 TTCAATCGGGGTGCGCAA 60.282 55.556 14.00 0.00 0.00 4.85
463 464 2.527547 CTTCAATCGGGGTGCGCAAC 62.528 60.000 19.53 19.53 0.00 4.17
464 465 4.459331 CAATCGGGGTGCGCAACG 62.459 66.667 21.02 20.51 0.00 4.10
465 466 4.690719 AATCGGGGTGCGCAACGA 62.691 61.111 27.35 27.35 39.85 3.85
466 467 4.690719 ATCGGGGTGCGCAACGAA 62.691 61.111 28.37 14.79 38.94 3.85
471 472 3.037249 GGTGCGCAACGAACGGTA 61.037 61.111 14.00 0.00 36.05 4.02
472 473 2.468532 GTGCGCAACGAACGGTAG 59.531 61.111 14.00 0.00 0.00 3.18
473 474 2.027897 TGCGCAACGAACGGTAGT 59.972 55.556 8.16 0.00 0.00 2.73
474 475 2.304401 TGCGCAACGAACGGTAGTG 61.304 57.895 8.16 0.00 0.00 2.74
475 476 3.007070 GCGCAACGAACGGTAGTGG 62.007 63.158 0.30 0.00 0.00 4.00
476 477 2.377310 CGCAACGAACGGTAGTGGG 61.377 63.158 0.00 0.00 0.00 4.61
477 478 1.005867 GCAACGAACGGTAGTGGGA 60.006 57.895 0.00 0.00 0.00 4.37
478 479 1.287041 GCAACGAACGGTAGTGGGAC 61.287 60.000 0.00 0.00 0.00 4.46
479 480 0.316204 CAACGAACGGTAGTGGGACT 59.684 55.000 0.00 0.00 0.00 3.85
480 481 0.600057 AACGAACGGTAGTGGGACTC 59.400 55.000 0.00 0.00 0.00 3.36
481 482 0.538057 ACGAACGGTAGTGGGACTCA 60.538 55.000 0.00 0.00 0.00 3.41
482 483 0.815734 CGAACGGTAGTGGGACTCAT 59.184 55.000 0.00 0.00 0.00 2.90
483 484 1.469251 CGAACGGTAGTGGGACTCATG 60.469 57.143 0.00 0.00 0.00 3.07
484 485 0.902531 AACGGTAGTGGGACTCATGG 59.097 55.000 0.00 0.00 0.00 3.66
485 486 0.976073 ACGGTAGTGGGACTCATGGG 60.976 60.000 0.00 0.00 0.00 4.00
486 487 1.686325 CGGTAGTGGGACTCATGGGG 61.686 65.000 0.00 0.00 0.00 4.96
487 488 0.326238 GGTAGTGGGACTCATGGGGA 60.326 60.000 0.00 0.00 0.00 4.81
488 489 0.831307 GTAGTGGGACTCATGGGGAC 59.169 60.000 0.00 0.00 0.00 4.46
489 490 0.716591 TAGTGGGACTCATGGGGACT 59.283 55.000 0.00 0.00 0.00 3.85
490 491 0.178861 AGTGGGACTCATGGGGACTT 60.179 55.000 0.00 0.00 0.00 3.01
491 492 0.253327 GTGGGACTCATGGGGACTTC 59.747 60.000 0.00 0.00 0.00 3.01
492 493 0.119155 TGGGACTCATGGGGACTTCT 59.881 55.000 0.00 0.00 0.00 2.85
493 494 0.543749 GGGACTCATGGGGACTTCTG 59.456 60.000 0.00 0.00 0.00 3.02
494 495 0.543749 GGACTCATGGGGACTTCTGG 59.456 60.000 0.00 0.00 0.00 3.86
495 496 1.280457 GACTCATGGGGACTTCTGGT 58.720 55.000 0.00 0.00 0.00 4.00
496 497 0.987294 ACTCATGGGGACTTCTGGTG 59.013 55.000 0.00 0.00 0.00 4.17
497 498 0.254178 CTCATGGGGACTTCTGGTGG 59.746 60.000 0.00 0.00 0.00 4.61
498 499 0.178876 TCATGGGGACTTCTGGTGGA 60.179 55.000 0.00 0.00 0.00 4.02
499 500 0.921896 CATGGGGACTTCTGGTGGAT 59.078 55.000 0.00 0.00 0.00 3.41
500 501 1.133976 CATGGGGACTTCTGGTGGATC 60.134 57.143 0.00 0.00 0.00 3.36
501 502 0.914417 TGGGGACTTCTGGTGGATCC 60.914 60.000 4.20 4.20 0.00 3.36
502 503 0.621862 GGGGACTTCTGGTGGATCCT 60.622 60.000 14.23 0.00 37.07 3.24
503 504 1.344087 GGGGACTTCTGGTGGATCCTA 60.344 57.143 14.23 0.00 37.07 2.94
504 505 2.043227 GGGACTTCTGGTGGATCCTAG 58.957 57.143 14.23 8.94 37.07 3.02
505 506 2.043227 GGACTTCTGGTGGATCCTAGG 58.957 57.143 14.23 0.82 37.07 3.02
506 507 1.414550 GACTTCTGGTGGATCCTAGGC 59.585 57.143 14.23 0.55 37.07 3.93
507 508 1.008938 ACTTCTGGTGGATCCTAGGCT 59.991 52.381 14.23 0.00 37.07 4.58
508 509 1.415659 CTTCTGGTGGATCCTAGGCTG 59.584 57.143 14.23 0.00 37.07 4.85
509 510 0.399091 TCTGGTGGATCCTAGGCTGG 60.399 60.000 14.23 0.00 37.07 4.85
510 511 0.399091 CTGGTGGATCCTAGGCTGGA 60.399 60.000 14.23 3.65 40.82 3.86
511 512 0.399091 TGGTGGATCCTAGGCTGGAG 60.399 60.000 14.23 0.00 39.78 3.86
512 513 1.751563 GTGGATCCTAGGCTGGAGC 59.248 63.158 14.23 11.29 41.42 4.70
522 523 4.527583 GCTGGAGCCAGGCGAGAG 62.528 72.222 17.64 3.98 43.77 3.20
534 535 2.125753 CGAGAGCGCTTGGAGCTT 60.126 61.111 13.26 0.00 46.13 3.74
535 536 1.739562 CGAGAGCGCTTGGAGCTTT 60.740 57.895 13.26 0.00 46.13 3.51
536 537 1.691215 CGAGAGCGCTTGGAGCTTTC 61.691 60.000 13.26 0.00 46.13 2.62
537 538 1.365368 GAGAGCGCTTGGAGCTTTCC 61.365 60.000 13.26 0.00 46.13 3.13
538 539 1.376553 GAGCGCTTGGAGCTTTCCT 60.377 57.895 13.26 0.00 46.13 3.36
539 540 1.365368 GAGCGCTTGGAGCTTTCCTC 61.365 60.000 13.26 0.00 46.13 3.71
548 549 2.611225 GAGCTTTCCTCCACATCGAT 57.389 50.000 0.00 0.00 34.35 3.59
549 550 2.208431 GAGCTTTCCTCCACATCGATG 58.792 52.381 23.68 23.68 34.35 3.84
550 551 0.659957 GCTTTCCTCCACATCGATGC 59.340 55.000 25.11 3.22 0.00 3.91
551 552 1.745141 GCTTTCCTCCACATCGATGCT 60.745 52.381 25.11 9.80 0.00 3.79
552 553 1.938577 CTTTCCTCCACATCGATGCTG 59.061 52.381 25.11 19.92 0.00 4.41
553 554 0.178767 TTCCTCCACATCGATGCTGG 59.821 55.000 27.45 27.45 33.28 4.85
554 555 0.977627 TCCTCCACATCGATGCTGGT 60.978 55.000 29.69 12.06 33.55 4.00
555 556 0.812811 CCTCCACATCGATGCTGGTG 60.813 60.000 29.69 27.63 33.55 4.17
556 557 3.817787 CCACATCGATGCTGGTGG 58.182 61.111 25.11 19.95 44.17 4.61
557 558 2.475466 CCACATCGATGCTGGTGGC 61.475 63.158 25.11 0.00 43.70 5.01
558 559 2.512286 ACATCGATGCTGGTGGCG 60.512 61.111 25.11 0.00 45.43 5.69
559 560 3.945434 CATCGATGCTGGTGGCGC 61.945 66.667 13.37 0.00 45.43 6.53
565 566 3.726558 ATGCTGGTGGCGCCATCAT 62.727 57.895 40.77 29.85 45.82 2.45
568 569 3.410628 TGGTGGCGCCATCATCCT 61.411 61.111 38.06 0.00 43.61 3.24
569 570 2.903855 GGTGGCGCCATCATCCTG 60.904 66.667 34.60 0.00 37.17 3.86
570 571 3.589881 GTGGCGCCATCATCCTGC 61.590 66.667 35.23 13.61 0.00 4.85
571 572 4.881440 TGGCGCCATCATCCTGCC 62.881 66.667 29.03 0.00 45.91 4.85
572 573 4.575973 GGCGCCATCATCCTGCCT 62.576 66.667 24.80 0.00 42.44 4.75
573 574 2.976903 GCGCCATCATCCTGCCTC 60.977 66.667 0.00 0.00 0.00 4.70
574 575 2.281345 CGCCATCATCCTGCCTCC 60.281 66.667 0.00 0.00 0.00 4.30
575 576 2.281345 GCCATCATCCTGCCTCCG 60.281 66.667 0.00 0.00 0.00 4.63
576 577 2.429058 CCATCATCCTGCCTCCGG 59.571 66.667 0.00 0.00 0.00 5.14
603 604 4.116328 CGAGGCTGAGCGGACGAA 62.116 66.667 9.99 0.00 0.00 3.85
604 605 2.202676 GAGGCTGAGCGGACGAAG 60.203 66.667 0.00 0.00 0.00 3.79
605 606 3.708220 GAGGCTGAGCGGACGAAGG 62.708 68.421 0.00 0.00 0.00 3.46
606 607 4.821589 GGCTGAGCGGACGAAGGG 62.822 72.222 0.00 0.00 0.00 3.95
607 608 3.760035 GCTGAGCGGACGAAGGGA 61.760 66.667 0.00 0.00 0.00 4.20
608 609 2.970639 CTGAGCGGACGAAGGGAA 59.029 61.111 0.00 0.00 0.00 3.97
609 610 1.517832 CTGAGCGGACGAAGGGAAT 59.482 57.895 0.00 0.00 0.00 3.01
610 611 0.807667 CTGAGCGGACGAAGGGAATG 60.808 60.000 0.00 0.00 0.00 2.67
611 612 1.254975 TGAGCGGACGAAGGGAATGA 61.255 55.000 0.00 0.00 0.00 2.57
612 613 0.108329 GAGCGGACGAAGGGAATGAA 60.108 55.000 0.00 0.00 0.00 2.57
613 614 0.108138 AGCGGACGAAGGGAATGAAG 60.108 55.000 0.00 0.00 0.00 3.02
614 615 1.706287 GCGGACGAAGGGAATGAAGC 61.706 60.000 0.00 0.00 0.00 3.86
615 616 1.421410 CGGACGAAGGGAATGAAGCG 61.421 60.000 0.00 0.00 0.00 4.68
616 617 0.108329 GGACGAAGGGAATGAAGCGA 60.108 55.000 0.00 0.00 0.00 4.93
617 618 1.473434 GGACGAAGGGAATGAAGCGAT 60.473 52.381 0.00 0.00 0.00 4.58
618 619 1.861575 GACGAAGGGAATGAAGCGATC 59.138 52.381 0.00 0.00 0.00 3.69
619 620 1.482593 ACGAAGGGAATGAAGCGATCT 59.517 47.619 0.00 0.00 0.00 2.75
620 621 2.131183 CGAAGGGAATGAAGCGATCTC 58.869 52.381 0.00 0.00 0.00 2.75
621 622 2.488952 GAAGGGAATGAAGCGATCTCC 58.511 52.381 0.00 0.00 0.00 3.71
622 623 1.799933 AGGGAATGAAGCGATCTCCT 58.200 50.000 0.00 0.00 0.00 3.69
623 624 1.691434 AGGGAATGAAGCGATCTCCTC 59.309 52.381 0.00 0.00 0.00 3.71
624 625 1.270571 GGGAATGAAGCGATCTCCTCC 60.271 57.143 0.00 0.00 0.00 4.30
625 626 1.414181 GGAATGAAGCGATCTCCTCCA 59.586 52.381 0.00 0.00 0.00 3.86
626 627 2.478831 GAATGAAGCGATCTCCTCCAC 58.521 52.381 0.00 0.00 0.00 4.02
627 628 0.755686 ATGAAGCGATCTCCTCCACC 59.244 55.000 0.00 0.00 0.00 4.61
628 629 0.324738 TGAAGCGATCTCCTCCACCT 60.325 55.000 0.00 0.00 0.00 4.00
629 630 0.387565 GAAGCGATCTCCTCCACCTC 59.612 60.000 0.00 0.00 0.00 3.85
630 631 1.045911 AAGCGATCTCCTCCACCTCC 61.046 60.000 0.00 0.00 0.00 4.30
631 632 2.851071 GCGATCTCCTCCACCTCCG 61.851 68.421 0.00 0.00 0.00 4.63
632 633 2.196925 CGATCTCCTCCACCTCCGG 61.197 68.421 0.00 0.00 0.00 5.14
633 634 1.834822 GATCTCCTCCACCTCCGGG 60.835 68.421 0.00 0.00 38.88 5.73
635 636 2.591193 ATCTCCTCCACCTCCGGGTC 62.591 65.000 0.00 0.00 45.41 4.46
636 637 3.273654 TCCTCCACCTCCGGGTCT 61.274 66.667 0.00 0.00 45.41 3.85
637 638 2.284699 CCTCCACCTCCGGGTCTT 60.285 66.667 0.00 0.00 45.41 3.01
638 639 2.359967 CCTCCACCTCCGGGTCTTC 61.360 68.421 0.00 0.00 45.41 2.87
639 640 2.284405 TCCACCTCCGGGTCTTCC 60.284 66.667 0.00 0.00 45.41 3.46
640 641 2.284699 CCACCTCCGGGTCTTCCT 60.285 66.667 0.00 0.00 45.41 3.36
641 642 2.359967 CCACCTCCGGGTCTTCCTC 61.360 68.421 0.00 0.00 45.41 3.71
642 643 2.039137 ACCTCCGGGTCTTCCTCC 59.961 66.667 0.00 0.00 43.38 4.30
643 644 2.364961 CCTCCGGGTCTTCCTCCT 59.635 66.667 0.00 0.00 0.00 3.69
644 645 1.758906 CCTCCGGGTCTTCCTCCTC 60.759 68.421 0.00 0.00 0.00 3.71
645 646 1.758906 CTCCGGGTCTTCCTCCTCC 60.759 68.421 0.00 0.00 0.00 4.30
646 647 2.231540 CTCCGGGTCTTCCTCCTCCT 62.232 65.000 0.00 0.00 0.00 3.69
647 648 1.758906 CCGGGTCTTCCTCCTCCTC 60.759 68.421 0.00 0.00 0.00 3.71
648 649 1.000486 CGGGTCTTCCTCCTCCTCA 60.000 63.158 0.00 0.00 0.00 3.86
649 650 0.397816 CGGGTCTTCCTCCTCCTCAT 60.398 60.000 0.00 0.00 0.00 2.90
650 651 1.419381 GGGTCTTCCTCCTCCTCATC 58.581 60.000 0.00 0.00 0.00 2.92
651 652 1.036707 GGTCTTCCTCCTCCTCATCG 58.963 60.000 0.00 0.00 0.00 3.84
652 653 1.036707 GTCTTCCTCCTCCTCATCGG 58.963 60.000 0.00 0.00 0.00 4.18
653 654 0.927029 TCTTCCTCCTCCTCATCGGA 59.073 55.000 0.00 0.00 40.30 4.55
661 662 3.374318 TCCTCATCGGAGTTCACCA 57.626 52.632 0.00 0.00 39.64 4.17
662 663 1.186200 TCCTCATCGGAGTTCACCAG 58.814 55.000 0.00 0.00 39.64 4.00
663 664 0.176680 CCTCATCGGAGTTCACCAGG 59.823 60.000 0.00 0.00 39.64 4.45
664 665 0.460987 CTCATCGGAGTTCACCAGGC 60.461 60.000 0.00 0.00 36.36 4.85
665 666 0.904865 TCATCGGAGTTCACCAGGCT 60.905 55.000 0.00 0.00 0.00 4.58
666 667 0.742281 CATCGGAGTTCACCAGGCTG 60.742 60.000 7.75 7.75 0.00 4.85
667 668 2.527951 ATCGGAGTTCACCAGGCTGC 62.528 60.000 9.56 0.00 0.00 5.25
668 669 2.753029 GGAGTTCACCAGGCTGCT 59.247 61.111 9.56 0.00 0.00 4.24
669 670 1.376553 GGAGTTCACCAGGCTGCTC 60.377 63.158 9.56 9.66 0.00 4.26
670 671 1.739562 GAGTTCACCAGGCTGCTCG 60.740 63.158 9.56 0.00 0.00 5.03
671 672 3.426568 GTTCACCAGGCTGCTCGC 61.427 66.667 9.56 0.00 38.13 5.03
694 695 3.435186 GCCGTCCAGCCAGCTTTC 61.435 66.667 0.00 0.00 0.00 2.62
695 696 2.747855 CCGTCCAGCCAGCTTTCC 60.748 66.667 0.00 0.00 0.00 3.13
696 697 2.348998 CGTCCAGCCAGCTTTCCT 59.651 61.111 0.00 0.00 0.00 3.36
697 698 1.743252 CGTCCAGCCAGCTTTCCTC 60.743 63.158 0.00 0.00 0.00 3.71
698 699 1.377856 GTCCAGCCAGCTTTCCTCC 60.378 63.158 0.00 0.00 0.00 4.30
699 700 1.539869 TCCAGCCAGCTTTCCTCCT 60.540 57.895 0.00 0.00 0.00 3.69
700 701 1.077858 CCAGCCAGCTTTCCTCCTC 60.078 63.158 0.00 0.00 0.00 3.71
701 702 1.560866 CCAGCCAGCTTTCCTCCTCT 61.561 60.000 0.00 0.00 0.00 3.69
702 703 0.107752 CAGCCAGCTTTCCTCCTCTC 60.108 60.000 0.00 0.00 0.00 3.20
703 704 0.252650 AGCCAGCTTTCCTCCTCTCT 60.253 55.000 0.00 0.00 0.00 3.10
704 705 0.177836 GCCAGCTTTCCTCCTCTCTC 59.822 60.000 0.00 0.00 0.00 3.20
705 706 0.459489 CCAGCTTTCCTCCTCTCTCG 59.541 60.000 0.00 0.00 0.00 4.04
706 707 1.181786 CAGCTTTCCTCCTCTCTCGT 58.818 55.000 0.00 0.00 0.00 4.18
707 708 1.135141 CAGCTTTCCTCCTCTCTCGTG 60.135 57.143 0.00 0.00 0.00 4.35
708 709 0.892063 GCTTTCCTCCTCTCTCGTGT 59.108 55.000 0.00 0.00 0.00 4.49
709 710 1.273886 GCTTTCCTCCTCTCTCGTGTT 59.726 52.381 0.00 0.00 0.00 3.32
710 711 2.672760 GCTTTCCTCCTCTCTCGTGTTC 60.673 54.545 0.00 0.00 0.00 3.18
711 712 2.287977 TTCCTCCTCTCTCGTGTTCA 57.712 50.000 0.00 0.00 0.00 3.18
712 713 1.827681 TCCTCCTCTCTCGTGTTCAG 58.172 55.000 0.00 0.00 0.00 3.02
713 714 1.351350 TCCTCCTCTCTCGTGTTCAGA 59.649 52.381 0.00 0.00 0.00 3.27
714 715 2.163509 CCTCCTCTCTCGTGTTCAGAA 58.836 52.381 0.00 0.00 0.00 3.02
715 716 2.757868 CCTCCTCTCTCGTGTTCAGAAT 59.242 50.000 0.00 0.00 0.00 2.40
716 717 3.428725 CCTCCTCTCTCGTGTTCAGAATG 60.429 52.174 0.00 0.00 37.54 2.67
779 780 1.771854 TGGTTCAGGTAGCTTTGACCA 59.228 47.619 13.84 13.84 39.65 4.02
1088 1436 3.759828 GTCGTCAACGCCGAACCG 61.760 66.667 0.00 0.00 39.60 4.44
1159 1595 1.866997 TTCCCTCCTCCCTCCTCCA 60.867 63.158 0.00 0.00 0.00 3.86
1191 1627 0.032403 TTCGACGTCATGTTCCCGTT 59.968 50.000 17.16 0.00 34.51 4.44
1203 1639 1.910580 TTCCCGTTGCCCTGGATCTC 61.911 60.000 0.00 0.00 0.00 2.75
1211 1647 2.519541 CCTGGATCTCCTCGCCGA 60.520 66.667 0.00 0.00 36.82 5.54
1361 1810 0.685097 GTCCACTGGCTGTACTCCAA 59.315 55.000 8.42 0.00 32.41 3.53
1369 1818 1.751924 GGCTGTACTCCAAGATCTCGT 59.248 52.381 0.00 0.00 0.00 4.18
1415 1864 2.203788 AGAGGACACCGCCTTGGA 60.204 61.111 0.00 0.00 42.00 3.53
1455 1904 2.352651 CGACATCTTCCGCAACAATCAT 59.647 45.455 0.00 0.00 0.00 2.45
1494 1943 2.408022 GACGCCGAGTATCACGCT 59.592 61.111 0.00 0.00 37.79 5.07
1667 2135 1.298157 CGCTGCCATCGTTTCTCCAA 61.298 55.000 0.00 0.00 0.00 3.53
1671 2139 1.202758 TGCCATCGTTTCTCCAAGTGT 60.203 47.619 0.00 0.00 0.00 3.55
1760 2228 2.435059 GCTGGTCGTGGCTCTTCC 60.435 66.667 0.00 0.00 0.00 3.46
1882 2619 2.345244 CGCTCCTGCTTCACCAGT 59.655 61.111 0.00 0.00 36.97 4.00
1886 2623 2.164865 CTCCTGCTTCACCAGTCGCT 62.165 60.000 0.00 0.00 0.00 4.93
2048 2787 1.069765 CATGTTCGCCGCTCCCTAT 59.930 57.895 0.00 0.00 0.00 2.57
2161 2945 4.657824 CGCCAGTTCGTCCACCGT 62.658 66.667 0.00 0.00 37.94 4.83
2243 3027 0.319555 CTTCTTCGTCGGGCACTTCA 60.320 55.000 0.00 0.00 0.00 3.02
2378 3164 2.436646 CCCTGTCACCCACATCGC 60.437 66.667 0.00 0.00 33.23 4.58
2419 3205 3.644335 GGTACCTCTCCTGTCCAACTAT 58.356 50.000 4.06 0.00 0.00 2.12
2617 3407 4.172512 CCTGCTCCTCGCCATGCT 62.173 66.667 0.00 0.00 38.05 3.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.651361 CTATCGGCCCGATCGCTT 59.349 61.111 24.15 0.69 43.45 4.68
3 4 2.675423 TCCCTATCGGCCCGATCG 60.675 66.667 24.15 16.71 43.45 3.69
4 5 2.971452 GTCCCTATCGGCCCGATC 59.029 66.667 24.15 3.66 43.45 3.69
12 13 1.227263 CCTGCAACCGTCCCTATCG 60.227 63.158 0.00 0.00 0.00 2.92
13 14 1.146263 CCCTGCAACCGTCCCTATC 59.854 63.158 0.00 0.00 0.00 2.08
14 15 0.694444 ATCCCTGCAACCGTCCCTAT 60.694 55.000 0.00 0.00 0.00 2.57
15 16 0.031917 TATCCCTGCAACCGTCCCTA 60.032 55.000 0.00 0.00 0.00 3.53
16 17 0.694444 ATATCCCTGCAACCGTCCCT 60.694 55.000 0.00 0.00 0.00 4.20
17 18 0.250338 GATATCCCTGCAACCGTCCC 60.250 60.000 0.00 0.00 0.00 4.46
18 19 0.468226 TGATATCCCTGCAACCGTCC 59.532 55.000 0.00 0.00 0.00 4.79
19 20 1.139058 ACTGATATCCCTGCAACCGTC 59.861 52.381 0.00 0.00 0.00 4.79
20 21 1.204146 ACTGATATCCCTGCAACCGT 58.796 50.000 0.00 0.00 0.00 4.83
21 22 2.868044 GCTACTGATATCCCTGCAACCG 60.868 54.545 0.00 0.00 0.00 4.44
22 23 2.551071 GGCTACTGATATCCCTGCAACC 60.551 54.545 0.00 0.00 0.00 3.77
23 24 2.551071 GGGCTACTGATATCCCTGCAAC 60.551 54.545 0.00 0.00 34.32 4.17
24 25 1.699634 GGGCTACTGATATCCCTGCAA 59.300 52.381 0.00 0.00 34.32 4.08
25 26 1.352083 GGGCTACTGATATCCCTGCA 58.648 55.000 0.00 0.00 34.32 4.41
26 27 0.615850 GGGGCTACTGATATCCCTGC 59.384 60.000 0.00 0.00 36.99 4.85
27 28 1.203364 AGGGGGCTACTGATATCCCTG 60.203 57.143 0.00 0.00 42.64 4.45
28 29 1.079658 GAGGGGGCTACTGATATCCCT 59.920 57.143 0.00 0.00 46.49 4.20
29 30 1.574263 GAGGGGGCTACTGATATCCC 58.426 60.000 0.00 0.00 36.16 3.85
30 31 1.203313 TGGAGGGGGCTACTGATATCC 60.203 57.143 0.00 0.00 0.00 2.59
31 32 2.327325 TGGAGGGGGCTACTGATATC 57.673 55.000 0.00 0.00 0.00 1.63
32 33 2.555664 CATGGAGGGGGCTACTGATAT 58.444 52.381 0.00 0.00 0.00 1.63
33 34 1.485019 CCATGGAGGGGGCTACTGATA 60.485 57.143 5.56 0.00 0.00 2.15
34 35 0.769776 CCATGGAGGGGGCTACTGAT 60.770 60.000 5.56 0.00 0.00 2.90
51 52 3.579302 CTCCACCAACTGCCCCCA 61.579 66.667 0.00 0.00 0.00 4.96
60 61 4.263572 CACCACCCGCTCCACCAA 62.264 66.667 0.00 0.00 0.00 3.67
86 87 2.035155 GGTACCAACTGCCCCACC 59.965 66.667 7.15 0.00 0.00 4.61
96 97 0.533308 GTTGCCGACTGTGGTACCAA 60.533 55.000 18.31 6.39 0.00 3.67
104 105 0.249911 GTGGAGAAGTTGCCGACTGT 60.250 55.000 0.00 0.00 39.00 3.55
110 111 2.359975 CCCCGTGGAGAAGTTGCC 60.360 66.667 0.00 0.00 0.00 4.52
111 112 2.359975 CCCCCGTGGAGAAGTTGC 60.360 66.667 0.00 0.00 35.39 4.17
137 138 0.846015 TCCCATAGACCCAGCCAATG 59.154 55.000 0.00 0.00 0.00 2.82
155 156 0.259938 AAAGGATGACCAGCCCCATC 59.740 55.000 0.02 0.00 37.67 3.51
167 168 1.547372 CAGGCACCCAGAAAAAGGATG 59.453 52.381 0.00 0.00 0.00 3.51
168 169 1.928868 CAGGCACCCAGAAAAAGGAT 58.071 50.000 0.00 0.00 0.00 3.24
169 170 0.827507 GCAGGCACCCAGAAAAAGGA 60.828 55.000 0.00 0.00 0.00 3.36
170 171 1.667722 GCAGGCACCCAGAAAAAGG 59.332 57.895 0.00 0.00 0.00 3.11
171 172 1.286880 CGCAGGCACCCAGAAAAAG 59.713 57.895 0.00 0.00 0.00 2.27
172 173 1.452145 GACGCAGGCACCCAGAAAAA 61.452 55.000 0.00 0.00 0.00 1.94
173 174 1.896660 GACGCAGGCACCCAGAAAA 60.897 57.895 0.00 0.00 0.00 2.29
174 175 2.281484 GACGCAGGCACCCAGAAA 60.281 61.111 0.00 0.00 0.00 2.52
175 176 4.329545 GGACGCAGGCACCCAGAA 62.330 66.667 0.00 0.00 0.00 3.02
206 207 4.785453 CTCCCAGGCTTGCCGACC 62.785 72.222 5.95 0.00 0.00 4.79
234 235 2.364647 CGACTAAGGAAGATGTACCCCC 59.635 54.545 0.00 0.00 0.00 5.40
235 236 3.067883 GTCGACTAAGGAAGATGTACCCC 59.932 52.174 8.70 0.00 0.00 4.95
236 237 3.952967 AGTCGACTAAGGAAGATGTACCC 59.047 47.826 18.46 0.00 0.00 3.69
237 238 4.639310 TGAGTCGACTAAGGAAGATGTACC 59.361 45.833 20.09 0.86 0.00 3.34
238 239 5.731126 GCTGAGTCGACTAAGGAAGATGTAC 60.731 48.000 27.78 8.36 0.00 2.90
239 240 4.335874 GCTGAGTCGACTAAGGAAGATGTA 59.664 45.833 27.78 0.46 0.00 2.29
240 241 3.129638 GCTGAGTCGACTAAGGAAGATGT 59.870 47.826 27.78 0.00 0.00 3.06
241 242 3.490078 GGCTGAGTCGACTAAGGAAGATG 60.490 52.174 27.78 5.49 0.00 2.90
242 243 2.691011 GGCTGAGTCGACTAAGGAAGAT 59.309 50.000 27.78 0.00 0.00 2.40
243 244 2.093106 GGCTGAGTCGACTAAGGAAGA 58.907 52.381 27.78 3.13 0.00 2.87
244 245 2.096248 AGGCTGAGTCGACTAAGGAAG 58.904 52.381 27.78 16.60 0.00 3.46
245 246 2.093106 GAGGCTGAGTCGACTAAGGAA 58.907 52.381 27.78 7.90 0.00 3.36
246 247 1.282447 AGAGGCTGAGTCGACTAAGGA 59.718 52.381 27.78 8.65 0.00 3.36
247 248 1.757682 AGAGGCTGAGTCGACTAAGG 58.242 55.000 27.78 17.12 0.00 2.69
248 249 4.336993 ACATTAGAGGCTGAGTCGACTAAG 59.663 45.833 23.73 23.73 0.00 2.18
249 250 4.270834 ACATTAGAGGCTGAGTCGACTAA 58.729 43.478 20.09 10.88 0.00 2.24
250 251 3.878103 GACATTAGAGGCTGAGTCGACTA 59.122 47.826 20.09 6.32 0.00 2.59
251 252 2.685897 GACATTAGAGGCTGAGTCGACT 59.314 50.000 20.18 20.18 0.00 4.18
252 253 3.073144 GACATTAGAGGCTGAGTCGAC 57.927 52.381 7.70 7.70 0.00 4.20
254 255 1.268794 CCGACATTAGAGGCTGAGTCG 60.269 57.143 13.41 13.41 45.82 4.18
255 256 1.751924 ACCGACATTAGAGGCTGAGTC 59.248 52.381 0.00 0.00 0.00 3.36
256 257 1.853963 ACCGACATTAGAGGCTGAGT 58.146 50.000 0.00 0.00 0.00 3.41
257 258 2.166459 TCAACCGACATTAGAGGCTGAG 59.834 50.000 0.00 0.00 0.00 3.35
258 259 2.166459 CTCAACCGACATTAGAGGCTGA 59.834 50.000 0.00 0.00 0.00 4.26
259 260 2.093973 ACTCAACCGACATTAGAGGCTG 60.094 50.000 0.00 0.00 0.00 4.85
260 261 2.093973 CACTCAACCGACATTAGAGGCT 60.094 50.000 0.00 0.00 0.00 4.58
261 262 2.271800 CACTCAACCGACATTAGAGGC 58.728 52.381 0.00 0.00 0.00 4.70
262 263 2.496070 TCCACTCAACCGACATTAGAGG 59.504 50.000 0.00 0.00 0.00 3.69
263 264 3.056821 TGTCCACTCAACCGACATTAGAG 60.057 47.826 0.00 0.00 31.74 2.43
264 265 2.894765 TGTCCACTCAACCGACATTAGA 59.105 45.455 0.00 0.00 31.74 2.10
265 266 3.313012 TGTCCACTCAACCGACATTAG 57.687 47.619 0.00 0.00 31.74 1.73
266 267 3.973206 ATGTCCACTCAACCGACATTA 57.027 42.857 0.00 0.00 43.05 1.90
267 268 2.859165 ATGTCCACTCAACCGACATT 57.141 45.000 0.00 0.00 43.05 2.71
268 269 2.426522 CAATGTCCACTCAACCGACAT 58.573 47.619 0.00 0.00 46.54 3.06
269 270 1.542328 CCAATGTCCACTCAACCGACA 60.542 52.381 0.00 0.00 40.58 4.35
270 271 1.156736 CCAATGTCCACTCAACCGAC 58.843 55.000 0.00 0.00 0.00 4.79
271 272 0.762418 ACCAATGTCCACTCAACCGA 59.238 50.000 0.00 0.00 0.00 4.69
272 273 1.156736 GACCAATGTCCACTCAACCG 58.843 55.000 0.00 0.00 35.34 4.44
273 274 2.039084 AGAGACCAATGTCCACTCAACC 59.961 50.000 0.00 0.00 42.81 3.77
274 275 3.409026 AGAGACCAATGTCCACTCAAC 57.591 47.619 0.00 0.00 42.81 3.18
275 276 4.389374 GAAAGAGACCAATGTCCACTCAA 58.611 43.478 0.00 0.00 42.81 3.02
276 277 3.244561 GGAAAGAGACCAATGTCCACTCA 60.245 47.826 0.00 0.00 42.81 3.41
277 278 3.339141 GGAAAGAGACCAATGTCCACTC 58.661 50.000 0.00 0.00 42.81 3.51
278 279 2.289694 CGGAAAGAGACCAATGTCCACT 60.290 50.000 0.00 0.00 42.81 4.00
279 280 2.076863 CGGAAAGAGACCAATGTCCAC 58.923 52.381 0.00 0.00 42.81 4.02
280 281 1.974957 TCGGAAAGAGACCAATGTCCA 59.025 47.619 0.00 0.00 42.81 4.02
281 282 2.762535 TCGGAAAGAGACCAATGTCC 57.237 50.000 0.00 0.00 42.81 4.02
282 283 2.939103 CCATCGGAAAGAGACCAATGTC 59.061 50.000 0.00 0.00 42.09 3.06
283 284 2.305927 ACCATCGGAAAGAGACCAATGT 59.694 45.455 0.00 0.00 0.00 2.71
284 285 2.939103 GACCATCGGAAAGAGACCAATG 59.061 50.000 0.00 0.00 0.00 2.82
285 286 2.840651 AGACCATCGGAAAGAGACCAAT 59.159 45.455 0.00 0.00 0.00 3.16
286 287 2.257207 AGACCATCGGAAAGAGACCAA 58.743 47.619 0.00 0.00 0.00 3.67
287 288 1.938585 AGACCATCGGAAAGAGACCA 58.061 50.000 0.00 0.00 0.00 4.02
288 289 2.498078 AGAAGACCATCGGAAAGAGACC 59.502 50.000 0.00 0.00 0.00 3.85
289 290 3.878160 AGAAGACCATCGGAAAGAGAC 57.122 47.619 0.00 0.00 0.00 3.36
290 291 4.090090 AGAAGAAGACCATCGGAAAGAGA 58.910 43.478 0.00 0.00 0.00 3.10
291 292 4.464069 AGAAGAAGACCATCGGAAAGAG 57.536 45.455 0.00 0.00 0.00 2.85
292 293 4.528596 AGAAGAAGAAGACCATCGGAAAGA 59.471 41.667 0.00 0.00 0.00 2.52
293 294 4.629200 CAGAAGAAGAAGACCATCGGAAAG 59.371 45.833 0.00 0.00 0.00 2.62
294 295 4.563580 CCAGAAGAAGAAGACCATCGGAAA 60.564 45.833 0.00 0.00 0.00 3.13
295 296 3.055819 CCAGAAGAAGAAGACCATCGGAA 60.056 47.826 0.00 0.00 0.00 4.30
296 297 2.497675 CCAGAAGAAGAAGACCATCGGA 59.502 50.000 0.00 0.00 0.00 4.55
297 298 2.898705 CCAGAAGAAGAAGACCATCGG 58.101 52.381 0.00 0.00 0.00 4.18
298 299 2.275318 GCCAGAAGAAGAAGACCATCG 58.725 52.381 0.00 0.00 0.00 3.84
299 300 2.026822 TGGCCAGAAGAAGAAGACCATC 60.027 50.000 0.00 0.00 0.00 3.51
300 301 1.988107 TGGCCAGAAGAAGAAGACCAT 59.012 47.619 0.00 0.00 0.00 3.55
301 302 1.349026 CTGGCCAGAAGAAGAAGACCA 59.651 52.381 29.88 0.00 0.00 4.02
302 303 1.948144 GCTGGCCAGAAGAAGAAGACC 60.948 57.143 37.21 9.96 0.00 3.85
303 304 1.271054 TGCTGGCCAGAAGAAGAAGAC 60.271 52.381 37.21 14.56 0.00 3.01
304 305 1.059098 TGCTGGCCAGAAGAAGAAGA 58.941 50.000 37.21 4.45 0.00 2.87
305 306 1.901591 TTGCTGGCCAGAAGAAGAAG 58.098 50.000 37.21 7.81 0.00 2.85
306 307 2.233271 CTTTGCTGGCCAGAAGAAGAA 58.767 47.619 37.21 16.15 0.00 2.52
307 308 1.901591 CTTTGCTGGCCAGAAGAAGA 58.098 50.000 37.21 8.06 0.00 2.87
308 309 0.243095 GCTTTGCTGGCCAGAAGAAG 59.757 55.000 37.21 30.42 0.00 2.85
309 310 0.178981 AGCTTTGCTGGCCAGAAGAA 60.179 50.000 37.21 23.20 37.57 2.52
310 311 1.457604 AGCTTTGCTGGCCAGAAGA 59.542 52.632 37.21 21.27 37.57 2.87
311 312 4.092343 AGCTTTGCTGGCCAGAAG 57.908 55.556 37.21 29.37 37.57 2.85
329 330 4.378459 CGTTGATGCAGTAAGGAAAAGTCC 60.378 45.833 0.00 0.00 45.35 3.85
330 331 4.378459 CCGTTGATGCAGTAAGGAAAAGTC 60.378 45.833 0.00 0.00 0.00 3.01
331 332 3.502211 CCGTTGATGCAGTAAGGAAAAGT 59.498 43.478 0.00 0.00 0.00 2.66
332 333 3.751175 TCCGTTGATGCAGTAAGGAAAAG 59.249 43.478 0.00 0.00 0.00 2.27
333 334 3.745799 TCCGTTGATGCAGTAAGGAAAA 58.254 40.909 0.00 0.00 0.00 2.29
334 335 3.007506 TCTCCGTTGATGCAGTAAGGAAA 59.992 43.478 0.00 0.00 0.00 3.13
335 336 2.565391 TCTCCGTTGATGCAGTAAGGAA 59.435 45.455 0.00 0.00 0.00 3.36
336 337 2.166459 CTCTCCGTTGATGCAGTAAGGA 59.834 50.000 0.00 0.00 0.00 3.36
337 338 2.166459 TCTCTCCGTTGATGCAGTAAGG 59.834 50.000 0.00 0.00 0.00 2.69
338 339 3.510388 TCTCTCCGTTGATGCAGTAAG 57.490 47.619 0.00 0.00 0.00 2.34
339 340 3.447229 TCATCTCTCCGTTGATGCAGTAA 59.553 43.478 0.00 0.00 39.69 2.24
340 341 3.023832 TCATCTCTCCGTTGATGCAGTA 58.976 45.455 0.00 0.00 39.69 2.74
341 342 1.827344 TCATCTCTCCGTTGATGCAGT 59.173 47.619 0.00 0.00 39.69 4.40
342 343 2.200067 GTCATCTCTCCGTTGATGCAG 58.800 52.381 0.00 0.00 39.69 4.41
343 344 1.550072 TGTCATCTCTCCGTTGATGCA 59.450 47.619 0.00 0.00 39.69 3.96
344 345 2.299993 TGTCATCTCTCCGTTGATGC 57.700 50.000 0.00 0.00 39.69 3.91
345 346 4.436332 TGATTGTCATCTCTCCGTTGATG 58.564 43.478 0.00 0.00 40.82 3.07
346 347 4.743057 TGATTGTCATCTCTCCGTTGAT 57.257 40.909 0.00 0.00 0.00 2.57
347 348 4.220602 TCTTGATTGTCATCTCTCCGTTGA 59.779 41.667 0.00 0.00 0.00 3.18
348 349 4.328440 GTCTTGATTGTCATCTCTCCGTTG 59.672 45.833 0.00 0.00 0.00 4.10
349 350 4.221703 AGTCTTGATTGTCATCTCTCCGTT 59.778 41.667 0.00 0.00 0.00 4.44
350 351 3.766591 AGTCTTGATTGTCATCTCTCCGT 59.233 43.478 0.00 0.00 0.00 4.69
351 352 4.383850 AGTCTTGATTGTCATCTCTCCG 57.616 45.455 0.00 0.00 0.00 4.63
352 353 5.728471 TGAAGTCTTGATTGTCATCTCTCC 58.272 41.667 0.00 0.00 0.00 3.71
353 354 7.664082 TTTGAAGTCTTGATTGTCATCTCTC 57.336 36.000 0.00 0.00 0.00 3.20
354 355 9.730705 TTATTTGAAGTCTTGATTGTCATCTCT 57.269 29.630 0.00 0.00 0.00 3.10
379 380 9.750125 GTTGTTCCTTTCTATCTTGTTGAATTT 57.250 29.630 0.00 0.00 0.00 1.82
380 381 8.912988 TGTTGTTCCTTTCTATCTTGTTGAATT 58.087 29.630 0.00 0.00 0.00 2.17
381 382 8.463930 TGTTGTTCCTTTCTATCTTGTTGAAT 57.536 30.769 0.00 0.00 0.00 2.57
382 383 7.873719 TGTTGTTCCTTTCTATCTTGTTGAA 57.126 32.000 0.00 0.00 0.00 2.69
383 384 9.739276 ATATGTTGTTCCTTTCTATCTTGTTGA 57.261 29.630 0.00 0.00 0.00 3.18
384 385 9.778993 CATATGTTGTTCCTTTCTATCTTGTTG 57.221 33.333 0.00 0.00 0.00 3.33
385 386 8.462016 GCATATGTTGTTCCTTTCTATCTTGTT 58.538 33.333 4.29 0.00 0.00 2.83
386 387 7.611467 TGCATATGTTGTTCCTTTCTATCTTGT 59.389 33.333 4.29 0.00 0.00 3.16
387 388 7.912250 GTGCATATGTTGTTCCTTTCTATCTTG 59.088 37.037 4.29 0.00 0.00 3.02
388 389 7.831193 AGTGCATATGTTGTTCCTTTCTATCTT 59.169 33.333 4.29 0.00 0.00 2.40
389 390 7.341805 AGTGCATATGTTGTTCCTTTCTATCT 58.658 34.615 4.29 0.00 0.00 1.98
390 391 7.559590 AGTGCATATGTTGTTCCTTTCTATC 57.440 36.000 4.29 0.00 0.00 2.08
391 392 9.461312 TTTAGTGCATATGTTGTTCCTTTCTAT 57.539 29.630 4.29 0.00 0.00 1.98
392 393 8.856153 TTTAGTGCATATGTTGTTCCTTTCTA 57.144 30.769 4.29 0.00 0.00 2.10
393 394 7.575720 GCTTTAGTGCATATGTTGTTCCTTTCT 60.576 37.037 4.29 0.00 0.00 2.52
394 395 6.528072 GCTTTAGTGCATATGTTGTTCCTTTC 59.472 38.462 4.29 0.00 0.00 2.62
395 396 6.389906 GCTTTAGTGCATATGTTGTTCCTTT 58.610 36.000 4.29 0.00 0.00 3.11
396 397 5.105756 GGCTTTAGTGCATATGTTGTTCCTT 60.106 40.000 4.29 0.00 34.04 3.36
397 398 4.399303 GGCTTTAGTGCATATGTTGTTCCT 59.601 41.667 4.29 0.00 34.04 3.36
398 399 4.399303 AGGCTTTAGTGCATATGTTGTTCC 59.601 41.667 4.29 0.00 34.04 3.62
399 400 5.567138 AGGCTTTAGTGCATATGTTGTTC 57.433 39.130 4.29 0.00 34.04 3.18
400 401 5.357032 GGTAGGCTTTAGTGCATATGTTGTT 59.643 40.000 4.29 0.00 31.86 2.83
401 402 4.881850 GGTAGGCTTTAGTGCATATGTTGT 59.118 41.667 4.29 0.00 31.86 3.32
402 403 4.881273 TGGTAGGCTTTAGTGCATATGTTG 59.119 41.667 4.29 0.00 31.86 3.33
403 404 5.110814 TGGTAGGCTTTAGTGCATATGTT 57.889 39.130 4.29 0.00 31.86 2.71
404 405 4.164221 ACTGGTAGGCTTTAGTGCATATGT 59.836 41.667 4.29 0.00 31.86 2.29
405 406 4.708177 ACTGGTAGGCTTTAGTGCATATG 58.292 43.478 0.00 0.00 31.86 1.78
406 407 4.408921 TGACTGGTAGGCTTTAGTGCATAT 59.591 41.667 0.00 0.00 31.86 1.78
407 408 3.772572 TGACTGGTAGGCTTTAGTGCATA 59.227 43.478 0.00 0.00 34.04 3.14
408 409 2.571653 TGACTGGTAGGCTTTAGTGCAT 59.428 45.455 0.00 0.00 34.04 3.96
409 410 1.974957 TGACTGGTAGGCTTTAGTGCA 59.025 47.619 0.00 0.00 34.04 4.57
410 411 2.233922 TCTGACTGGTAGGCTTTAGTGC 59.766 50.000 0.00 0.00 0.00 4.40
411 412 3.511934 AGTCTGACTGGTAGGCTTTAGTG 59.488 47.826 10.00 0.00 0.00 2.74
412 413 3.780626 AGTCTGACTGGTAGGCTTTAGT 58.219 45.455 10.00 0.00 0.00 2.24
413 414 4.810191 AAGTCTGACTGGTAGGCTTTAG 57.190 45.455 11.71 0.00 36.77 1.85
414 415 4.262894 CCAAAGTCTGACTGGTAGGCTTTA 60.263 45.833 11.71 0.00 45.43 1.85
416 417 2.039084 CCAAAGTCTGACTGGTAGGCTT 59.961 50.000 11.71 0.00 41.55 4.35
417 418 1.625818 CCAAAGTCTGACTGGTAGGCT 59.374 52.381 11.71 0.00 0.00 4.58
418 419 1.623811 TCCAAAGTCTGACTGGTAGGC 59.376 52.381 11.71 0.00 0.00 3.93
419 420 4.256920 CATTCCAAAGTCTGACTGGTAGG 58.743 47.826 11.71 10.77 0.00 3.18
420 421 4.899502 ACATTCCAAAGTCTGACTGGTAG 58.100 43.478 11.71 7.20 0.00 3.18
421 422 4.974645 ACATTCCAAAGTCTGACTGGTA 57.025 40.909 11.71 4.55 0.00 3.25
422 423 3.864789 ACATTCCAAAGTCTGACTGGT 57.135 42.857 11.71 0.00 0.00 4.00
423 424 4.392940 AGAACATTCCAAAGTCTGACTGG 58.607 43.478 11.71 10.28 0.00 4.00
424 425 5.528690 TGAAGAACATTCCAAAGTCTGACTG 59.471 40.000 11.71 0.30 0.00 3.51
425 426 5.684704 TGAAGAACATTCCAAAGTCTGACT 58.315 37.500 4.06 4.06 0.00 3.41
426 427 6.377327 TTGAAGAACATTCCAAAGTCTGAC 57.623 37.500 0.00 0.00 0.00 3.51
427 428 6.073058 CGATTGAAGAACATTCCAAAGTCTGA 60.073 38.462 0.00 0.00 0.00 3.27
428 429 6.082338 CGATTGAAGAACATTCCAAAGTCTG 58.918 40.000 0.00 0.00 0.00 3.51
429 430 5.182001 CCGATTGAAGAACATTCCAAAGTCT 59.818 40.000 0.00 0.00 0.00 3.24
430 431 5.393962 CCGATTGAAGAACATTCCAAAGTC 58.606 41.667 0.00 0.00 0.00 3.01
431 432 4.218417 CCCGATTGAAGAACATTCCAAAGT 59.782 41.667 0.00 0.00 0.00 2.66
432 433 4.380867 CCCCGATTGAAGAACATTCCAAAG 60.381 45.833 0.00 0.00 0.00 2.77
433 434 3.509575 CCCCGATTGAAGAACATTCCAAA 59.490 43.478 0.00 0.00 0.00 3.28
434 435 3.088532 CCCCGATTGAAGAACATTCCAA 58.911 45.455 0.00 0.00 0.00 3.53
435 436 2.041081 ACCCCGATTGAAGAACATTCCA 59.959 45.455 0.00 0.00 0.00 3.53
436 437 2.423538 CACCCCGATTGAAGAACATTCC 59.576 50.000 0.00 0.00 0.00 3.01
437 438 2.159379 GCACCCCGATTGAAGAACATTC 60.159 50.000 0.00 0.00 0.00 2.67
438 439 1.818674 GCACCCCGATTGAAGAACATT 59.181 47.619 0.00 0.00 0.00 2.71
439 440 1.463674 GCACCCCGATTGAAGAACAT 58.536 50.000 0.00 0.00 0.00 2.71
440 441 0.953471 CGCACCCCGATTGAAGAACA 60.953 55.000 0.00 0.00 40.02 3.18
441 442 1.794222 CGCACCCCGATTGAAGAAC 59.206 57.895 0.00 0.00 40.02 3.01
442 443 2.038269 GCGCACCCCGATTGAAGAA 61.038 57.895 0.30 0.00 40.02 2.52
443 444 2.435938 GCGCACCCCGATTGAAGA 60.436 61.111 0.30 0.00 40.02 2.87
444 445 2.331893 TTGCGCACCCCGATTGAAG 61.332 57.895 11.12 0.00 40.02 3.02
445 446 2.281831 TTGCGCACCCCGATTGAA 60.282 55.556 11.12 0.00 40.02 2.69
446 447 3.053291 GTTGCGCACCCCGATTGA 61.053 61.111 11.12 0.00 40.02 2.57
447 448 4.459331 CGTTGCGCACCCCGATTG 62.459 66.667 11.12 0.00 40.02 2.67
448 449 4.690719 TCGTTGCGCACCCCGATT 62.691 61.111 11.12 0.00 40.02 3.34
449 450 4.690719 TTCGTTGCGCACCCCGAT 62.691 61.111 21.78 0.00 40.02 4.18
454 455 3.007070 CTACCGTTCGTTGCGCACC 62.007 63.158 11.12 0.16 0.00 5.01
455 456 2.305127 ACTACCGTTCGTTGCGCAC 61.305 57.895 11.12 4.51 0.00 5.34
456 457 2.027897 ACTACCGTTCGTTGCGCA 59.972 55.556 5.66 5.66 0.00 6.09
457 458 2.468532 CACTACCGTTCGTTGCGC 59.531 61.111 0.00 0.00 0.00 6.09
458 459 2.377310 CCCACTACCGTTCGTTGCG 61.377 63.158 0.00 0.00 0.00 4.85
459 460 1.005867 TCCCACTACCGTTCGTTGC 60.006 57.895 0.00 0.00 0.00 4.17
460 461 0.316204 AGTCCCACTACCGTTCGTTG 59.684 55.000 0.00 0.00 0.00 4.10
461 462 0.600057 GAGTCCCACTACCGTTCGTT 59.400 55.000 0.00 0.00 0.00 3.85
462 463 0.538057 TGAGTCCCACTACCGTTCGT 60.538 55.000 0.00 0.00 0.00 3.85
463 464 0.815734 ATGAGTCCCACTACCGTTCG 59.184 55.000 0.00 0.00 0.00 3.95
464 465 1.134788 CCATGAGTCCCACTACCGTTC 60.135 57.143 0.00 0.00 0.00 3.95
465 466 0.902531 CCATGAGTCCCACTACCGTT 59.097 55.000 0.00 0.00 0.00 4.44
466 467 0.976073 CCCATGAGTCCCACTACCGT 60.976 60.000 0.00 0.00 0.00 4.83
467 468 1.686325 CCCCATGAGTCCCACTACCG 61.686 65.000 0.00 0.00 0.00 4.02
468 469 0.326238 TCCCCATGAGTCCCACTACC 60.326 60.000 0.00 0.00 0.00 3.18
469 470 0.831307 GTCCCCATGAGTCCCACTAC 59.169 60.000 0.00 0.00 0.00 2.73
470 471 0.716591 AGTCCCCATGAGTCCCACTA 59.283 55.000 0.00 0.00 0.00 2.74
471 472 0.178861 AAGTCCCCATGAGTCCCACT 60.179 55.000 0.00 0.00 0.00 4.00
472 473 0.253327 GAAGTCCCCATGAGTCCCAC 59.747 60.000 0.00 0.00 0.00 4.61
473 474 0.119155 AGAAGTCCCCATGAGTCCCA 59.881 55.000 0.00 0.00 0.00 4.37
474 475 0.543749 CAGAAGTCCCCATGAGTCCC 59.456 60.000 0.00 0.00 0.00 4.46
475 476 0.543749 CCAGAAGTCCCCATGAGTCC 59.456 60.000 0.00 0.00 0.00 3.85
476 477 1.065854 CACCAGAAGTCCCCATGAGTC 60.066 57.143 0.00 0.00 0.00 3.36
477 478 0.987294 CACCAGAAGTCCCCATGAGT 59.013 55.000 0.00 0.00 0.00 3.41
478 479 0.254178 CCACCAGAAGTCCCCATGAG 59.746 60.000 0.00 0.00 0.00 2.90
479 480 0.178876 TCCACCAGAAGTCCCCATGA 60.179 55.000 0.00 0.00 0.00 3.07
480 481 0.921896 ATCCACCAGAAGTCCCCATG 59.078 55.000 0.00 0.00 0.00 3.66
481 482 1.216990 GATCCACCAGAAGTCCCCAT 58.783 55.000 0.00 0.00 0.00 4.00
482 483 0.914417 GGATCCACCAGAAGTCCCCA 60.914 60.000 6.95 0.00 38.79 4.96
483 484 0.621862 AGGATCCACCAGAAGTCCCC 60.622 60.000 15.82 0.00 42.04 4.81
484 485 2.043227 CTAGGATCCACCAGAAGTCCC 58.957 57.143 15.82 0.00 42.04 4.46
485 486 2.043227 CCTAGGATCCACCAGAAGTCC 58.957 57.143 15.82 0.00 42.04 3.85
486 487 1.414550 GCCTAGGATCCACCAGAAGTC 59.585 57.143 14.75 0.00 42.04 3.01
487 488 1.008938 AGCCTAGGATCCACCAGAAGT 59.991 52.381 14.75 0.00 42.04 3.01
488 489 1.415659 CAGCCTAGGATCCACCAGAAG 59.584 57.143 14.75 1.17 42.04 2.85
489 490 1.500474 CAGCCTAGGATCCACCAGAA 58.500 55.000 14.75 0.00 42.04 3.02
490 491 0.399091 CCAGCCTAGGATCCACCAGA 60.399 60.000 14.75 0.00 42.04 3.86
491 492 0.399091 TCCAGCCTAGGATCCACCAG 60.399 60.000 14.75 7.76 42.04 4.00
492 493 0.399091 CTCCAGCCTAGGATCCACCA 60.399 60.000 14.75 0.00 42.04 4.17
493 494 1.763546 GCTCCAGCCTAGGATCCACC 61.764 65.000 14.75 0.00 36.99 4.61
494 495 1.751563 GCTCCAGCCTAGGATCCAC 59.248 63.158 14.75 0.00 36.99 4.02
495 496 4.302622 GCTCCAGCCTAGGATCCA 57.697 61.111 14.75 0.00 36.99 3.41
505 506 4.527583 CTCTCGCCTGGCTCCAGC 62.528 72.222 17.92 5.52 42.35 4.85
506 507 4.527583 GCTCTCGCCTGGCTCCAG 62.528 72.222 17.92 8.93 43.26 3.86
528 529 0.537188 TCGATGTGGAGGAAAGCTCC 59.463 55.000 0.00 0.00 42.81 4.70
529 530 2.208431 CATCGATGTGGAGGAAAGCTC 58.792 52.381 17.50 0.00 0.00 4.09
530 531 1.745141 GCATCGATGTGGAGGAAAGCT 60.745 52.381 25.47 0.00 0.00 3.74
531 532 0.659957 GCATCGATGTGGAGGAAAGC 59.340 55.000 25.47 4.32 0.00 3.51
532 533 1.938577 CAGCATCGATGTGGAGGAAAG 59.061 52.381 25.47 0.00 0.00 2.62
533 534 1.407299 CCAGCATCGATGTGGAGGAAA 60.407 52.381 28.55 0.00 33.59 3.13
534 535 0.178767 CCAGCATCGATGTGGAGGAA 59.821 55.000 28.55 0.00 33.59 3.36
535 536 0.977627 ACCAGCATCGATGTGGAGGA 60.978 55.000 34.17 0.00 34.88 3.71
536 537 0.812811 CACCAGCATCGATGTGGAGG 60.813 60.000 34.17 27.01 34.88 4.30
537 538 2.686602 CACCAGCATCGATGTGGAG 58.313 57.895 34.17 27.53 34.88 3.86
538 539 4.939399 CACCAGCATCGATGTGGA 57.061 55.556 34.17 0.00 34.88 4.02
539 540 3.817787 CCACCAGCATCGATGTGG 58.182 61.111 29.64 29.64 42.01 4.17
540 541 2.816360 CGCCACCAGCATCGATGTG 61.816 63.158 25.47 20.25 44.04 3.21
541 542 2.512286 CGCCACCAGCATCGATGT 60.512 61.111 25.47 10.56 44.04 3.06
542 543 3.945434 GCGCCACCAGCATCGATG 61.945 66.667 21.27 21.27 44.04 3.84
552 553 2.903855 CAGGATGATGGCGCCACC 60.904 66.667 35.50 28.19 39.69 4.61
553 554 3.589881 GCAGGATGATGGCGCCAC 61.590 66.667 35.50 25.23 39.69 5.01
554 555 4.881440 GGCAGGATGATGGCGCCA 62.881 66.667 34.80 34.80 42.50 5.69
558 559 2.281345 CGGAGGCAGGATGATGGC 60.281 66.667 0.00 0.00 45.63 4.40
559 560 2.429058 CCGGAGGCAGGATGATGG 59.571 66.667 0.00 0.00 46.14 3.51
586 587 4.116328 TTCGTCCGCTCAGCCTCG 62.116 66.667 0.00 0.00 0.00 4.63
587 588 2.202676 CTTCGTCCGCTCAGCCTC 60.203 66.667 0.00 0.00 0.00 4.70
588 589 3.764466 CCTTCGTCCGCTCAGCCT 61.764 66.667 0.00 0.00 0.00 4.58
589 590 4.821589 CCCTTCGTCCGCTCAGCC 62.822 72.222 0.00 0.00 0.00 4.85
590 591 2.579684 ATTCCCTTCGTCCGCTCAGC 62.580 60.000 0.00 0.00 0.00 4.26
591 592 0.807667 CATTCCCTTCGTCCGCTCAG 60.808 60.000 0.00 0.00 0.00 3.35
592 593 1.218047 CATTCCCTTCGTCCGCTCA 59.782 57.895 0.00 0.00 0.00 4.26
593 594 0.108329 TTCATTCCCTTCGTCCGCTC 60.108 55.000 0.00 0.00 0.00 5.03
594 595 0.108138 CTTCATTCCCTTCGTCCGCT 60.108 55.000 0.00 0.00 0.00 5.52
595 596 1.706287 GCTTCATTCCCTTCGTCCGC 61.706 60.000 0.00 0.00 0.00 5.54
596 597 1.421410 CGCTTCATTCCCTTCGTCCG 61.421 60.000 0.00 0.00 0.00 4.79
597 598 0.108329 TCGCTTCATTCCCTTCGTCC 60.108 55.000 0.00 0.00 0.00 4.79
598 599 1.861575 GATCGCTTCATTCCCTTCGTC 59.138 52.381 0.00 0.00 0.00 4.20
599 600 1.482593 AGATCGCTTCATTCCCTTCGT 59.517 47.619 0.00 0.00 0.00 3.85
600 601 2.131183 GAGATCGCTTCATTCCCTTCG 58.869 52.381 0.00 0.00 0.00 3.79
601 602 2.103941 AGGAGATCGCTTCATTCCCTTC 59.896 50.000 0.00 0.00 0.00 3.46
602 603 2.103941 GAGGAGATCGCTTCATTCCCTT 59.896 50.000 3.66 0.00 0.00 3.95
603 604 1.691434 GAGGAGATCGCTTCATTCCCT 59.309 52.381 3.66 0.00 0.00 4.20
604 605 1.270571 GGAGGAGATCGCTTCATTCCC 60.271 57.143 10.60 0.00 0.00 3.97
605 606 1.414181 TGGAGGAGATCGCTTCATTCC 59.586 52.381 10.60 0.00 0.00 3.01
606 607 2.478831 GTGGAGGAGATCGCTTCATTC 58.521 52.381 10.60 0.00 0.00 2.67
607 608 1.139853 GGTGGAGGAGATCGCTTCATT 59.860 52.381 10.60 0.00 0.00 2.57
608 609 0.755686 GGTGGAGGAGATCGCTTCAT 59.244 55.000 10.60 0.00 0.00 2.57
609 610 0.324738 AGGTGGAGGAGATCGCTTCA 60.325 55.000 10.60 0.00 0.00 3.02
610 611 0.387565 GAGGTGGAGGAGATCGCTTC 59.612 60.000 0.00 0.00 0.00 3.86
611 612 1.045911 GGAGGTGGAGGAGATCGCTT 61.046 60.000 0.00 0.00 0.00 4.68
612 613 1.456705 GGAGGTGGAGGAGATCGCT 60.457 63.158 0.00 0.00 0.00 4.93
613 614 2.851071 CGGAGGTGGAGGAGATCGC 61.851 68.421 0.00 0.00 0.00 4.58
614 615 3.437867 CGGAGGTGGAGGAGATCG 58.562 66.667 0.00 0.00 0.00 3.69
627 628 1.758906 GGAGGAGGAAGACCCGGAG 60.759 68.421 0.73 0.00 40.87 4.63
628 629 2.226149 GAGGAGGAGGAAGACCCGGA 62.226 65.000 0.73 0.00 40.87 5.14
629 630 1.758906 GAGGAGGAGGAAGACCCGG 60.759 68.421 0.00 0.00 40.87 5.73
630 631 0.397816 ATGAGGAGGAGGAAGACCCG 60.398 60.000 0.00 0.00 40.87 5.28
631 632 1.419381 GATGAGGAGGAGGAAGACCC 58.581 60.000 0.00 0.00 36.73 4.46
632 633 1.036707 CGATGAGGAGGAGGAAGACC 58.963 60.000 0.00 0.00 0.00 3.85
633 634 1.036707 CCGATGAGGAGGAGGAAGAC 58.963 60.000 0.00 0.00 45.00 3.01
634 635 0.927029 TCCGATGAGGAGGAGGAAGA 59.073 55.000 0.00 0.00 45.98 2.87
635 636 3.522483 TCCGATGAGGAGGAGGAAG 57.478 57.895 0.00 0.00 45.98 3.46
644 645 0.176680 CCTGGTGAACTCCGATGAGG 59.823 60.000 0.00 0.00 43.29 3.86
645 646 0.460987 GCCTGGTGAACTCCGATGAG 60.461 60.000 0.00 0.00 44.62 2.90
646 647 0.904865 AGCCTGGTGAACTCCGATGA 60.905 55.000 0.00 0.00 0.00 2.92
647 648 0.742281 CAGCCTGGTGAACTCCGATG 60.742 60.000 0.00 0.00 0.00 3.84
648 649 1.599047 CAGCCTGGTGAACTCCGAT 59.401 57.895 0.00 0.00 0.00 4.18
649 650 3.059982 CAGCCTGGTGAACTCCGA 58.940 61.111 0.00 0.00 0.00 4.55
650 651 2.743928 GCAGCCTGGTGAACTCCG 60.744 66.667 0.00 0.00 0.00 4.63
651 652 1.376553 GAGCAGCCTGGTGAACTCC 60.377 63.158 0.00 0.00 0.00 3.85
652 653 1.739562 CGAGCAGCCTGGTGAACTC 60.740 63.158 0.00 0.00 0.00 3.01
653 654 2.345244 CGAGCAGCCTGGTGAACT 59.655 61.111 0.00 0.00 0.00 3.01
654 655 3.426568 GCGAGCAGCCTGGTGAAC 61.427 66.667 0.00 0.00 40.81 3.18
677 678 3.435186 GAAAGCTGGCTGGACGGC 61.435 66.667 0.00 0.00 43.08 5.68
678 679 2.747855 GGAAAGCTGGCTGGACGG 60.748 66.667 0.00 0.00 0.00 4.79
679 680 1.743252 GAGGAAAGCTGGCTGGACG 60.743 63.158 0.00 0.00 0.00 4.79
680 681 1.377856 GGAGGAAAGCTGGCTGGAC 60.378 63.158 0.00 0.00 0.00 4.02
681 682 1.539869 AGGAGGAAAGCTGGCTGGA 60.540 57.895 0.00 0.00 0.00 3.86
682 683 1.077858 GAGGAGGAAAGCTGGCTGG 60.078 63.158 0.00 0.00 0.00 4.85
683 684 0.107752 GAGAGGAGGAAAGCTGGCTG 60.108 60.000 0.00 0.00 0.00 4.85
684 685 0.252650 AGAGAGGAGGAAAGCTGGCT 60.253 55.000 0.00 0.00 0.00 4.75
685 686 0.177836 GAGAGAGGAGGAAAGCTGGC 59.822 60.000 0.00 0.00 0.00 4.85
686 687 0.459489 CGAGAGAGGAGGAAAGCTGG 59.541 60.000 0.00 0.00 0.00 4.85
687 688 1.135141 CACGAGAGAGGAGGAAAGCTG 60.135 57.143 0.00 0.00 0.00 4.24
688 689 1.181786 CACGAGAGAGGAGGAAAGCT 58.818 55.000 0.00 0.00 0.00 3.74
689 690 0.892063 ACACGAGAGAGGAGGAAAGC 59.108 55.000 0.00 0.00 0.00 3.51
690 691 2.558795 TGAACACGAGAGAGGAGGAAAG 59.441 50.000 0.00 0.00 0.00 2.62
691 692 2.558795 CTGAACACGAGAGAGGAGGAAA 59.441 50.000 0.00 0.00 0.00 3.13
692 693 2.163509 CTGAACACGAGAGAGGAGGAA 58.836 52.381 0.00 0.00 0.00 3.36
693 694 1.351350 TCTGAACACGAGAGAGGAGGA 59.649 52.381 0.00 0.00 0.00 3.71
694 695 1.827681 TCTGAACACGAGAGAGGAGG 58.172 55.000 0.00 0.00 0.00 4.30
695 696 3.441922 TCATTCTGAACACGAGAGAGGAG 59.558 47.826 0.00 0.00 0.00 3.69
696 697 3.421844 TCATTCTGAACACGAGAGAGGA 58.578 45.455 0.00 0.00 0.00 3.71
697 698 3.857549 TCATTCTGAACACGAGAGAGG 57.142 47.619 0.00 0.00 0.00 3.69
698 699 6.038161 AGTCTATCATTCTGAACACGAGAGAG 59.962 42.308 9.55 3.74 0.00 3.20
699 700 5.883115 AGTCTATCATTCTGAACACGAGAGA 59.117 40.000 0.00 0.00 0.00 3.10
700 701 6.130298 AGTCTATCATTCTGAACACGAGAG 57.870 41.667 0.00 0.00 0.00 3.20
701 702 6.261158 CCTAGTCTATCATTCTGAACACGAGA 59.739 42.308 0.00 0.00 0.00 4.04
702 703 6.038825 ACCTAGTCTATCATTCTGAACACGAG 59.961 42.308 0.00 0.00 0.00 4.18
703 704 5.886474 ACCTAGTCTATCATTCTGAACACGA 59.114 40.000 0.00 0.00 0.00 4.35
704 705 6.137794 ACCTAGTCTATCATTCTGAACACG 57.862 41.667 0.00 0.00 0.00 4.49
705 706 8.228035 ACTACCTAGTCTATCATTCTGAACAC 57.772 38.462 0.00 0.00 0.00 3.32
706 707 8.824756 AACTACCTAGTCTATCATTCTGAACA 57.175 34.615 0.00 0.00 34.99 3.18
745 746 7.387948 GCTACCTGAACCATATACAATACAAGG 59.612 40.741 0.00 0.00 0.00 3.61
759 760 1.771854 TGGTCAAAGCTACCTGAACCA 59.228 47.619 5.75 7.73 37.91 3.67
779 780 3.885297 ACTACTCAACAAAACTGCTGCAT 59.115 39.130 1.31 0.00 0.00 3.96
1074 1407 3.291167 GAAGCGGTTCGGCGTTGAC 62.291 63.158 12.13 4.50 38.18 3.18
1122 1540 4.400251 AGACGGGGGAGGTGGGAG 62.400 72.222 0.00 0.00 0.00 4.30
1176 1612 1.964373 GGCAACGGGAACATGACGT 60.964 57.895 0.00 1.46 43.43 4.34
1191 1627 3.157252 GCGAGGAGATCCAGGGCA 61.157 66.667 0.92 0.00 38.89 5.36
1203 1639 0.099082 GAGAGTAGTTGTCGGCGAGG 59.901 60.000 11.20 0.00 0.00 4.63
1211 1647 1.896465 GCCTCCACTGAGAGTAGTTGT 59.104 52.381 0.00 0.00 41.42 3.32
1398 1847 2.203788 TCCAAGGCGGTGTCCTCT 60.204 61.111 0.00 0.00 34.82 3.69
1429 1878 0.172578 TTGCGGAAGATGTCGTCGAT 59.827 50.000 0.00 0.00 0.00 3.59
1494 1943 1.274167 GTCATGTTACCCTGGACGACA 59.726 52.381 0.00 0.00 0.00 4.35
1507 1956 5.556355 CAGTATTGCATCACAGTCATGTT 57.444 39.130 0.00 0.00 37.65 2.71
1667 2135 1.333177 AGAGAAGGAACGAGCACACT 58.667 50.000 0.00 0.00 0.00 3.55
1671 2139 1.273606 CTCCAAGAGAAGGAACGAGCA 59.726 52.381 0.00 0.00 34.08 4.26
1741 2209 3.240134 GAAGAGCCACGACCAGCCA 62.240 63.158 0.00 0.00 0.00 4.75
2105 2871 3.066814 GGCGGTCCGTAGACAGGT 61.067 66.667 13.94 0.00 45.48 4.00
2359 3145 1.676968 CGATGTGGGTGACAGGGAA 59.323 57.895 0.00 0.00 38.23 3.97
2419 3205 1.344438 AGGTGAGACGAGAACATTGCA 59.656 47.619 0.00 0.00 0.00 4.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.