Multiple sequence alignment - TraesCS4D01G088800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G088800 chr4D 100.000 3084 0 0 1 3084 64401425 64404508 0.000000e+00 5696.0
1 TraesCS4D01G088800 chr4D 97.095 482 14 0 2578 3059 64411887 64412368 0.000000e+00 813.0
2 TraesCS4D01G088800 chr4D 94.675 507 25 1 2578 3084 57503091 57502587 0.000000e+00 785.0
3 TraesCS4D01G088800 chr4D 94.477 507 28 0 2578 3084 115488191 115488697 0.000000e+00 782.0
4 TraesCS4D01G088800 chr4D 94.477 507 28 0 2578 3084 399840032 399839526 0.000000e+00 782.0
5 TraesCS4D01G088800 chr4D 89.655 174 3 2 1 159 8892151 8891978 1.120000e-49 207.0
6 TraesCS4D01G088800 chr4B 88.493 1095 70 20 1150 2223 94950120 94951179 0.000000e+00 1273.0
7 TraesCS4D01G088800 chr4B 90.414 459 28 5 336 781 94947352 94947807 9.520000e-165 590.0
8 TraesCS4D01G088800 chr4B 94.737 190 7 3 970 1157 94949905 94950093 3.010000e-75 292.0
9 TraesCS4D01G088800 chr4B 92.718 206 8 3 773 971 94949484 94949689 1.080000e-74 291.0
10 TraesCS4D01G088800 chr4B 82.128 235 36 2 1912 2146 94956215 94956443 2.430000e-46 196.0
11 TraesCS4D01G088800 chr4B 92.086 139 10 1 159 297 94945360 94945497 8.730000e-46 195.0
12 TraesCS4D01G088800 chr4B 97.727 44 1 0 287 330 94945920 94945963 3.300000e-10 76.8
13 TraesCS4D01G088800 chr4A 86.811 1198 78 39 1071 2210 532075156 532073981 0.000000e+00 1264.0
14 TraesCS4D01G088800 chr4A 90.237 676 36 13 346 1016 532075815 532075165 0.000000e+00 856.0
15 TraesCS4D01G088800 chr4A 82.278 158 5 3 159 316 532075937 532075803 6.990000e-22 115.0
16 TraesCS4D01G088800 chr3D 94.675 507 27 0 2578 3084 9978007 9978513 0.000000e+00 787.0
17 TraesCS4D01G088800 chr3D 94.477 507 28 0 2578 3084 185312470 185312976 0.000000e+00 782.0
18 TraesCS4D01G088800 chr3D 86.350 337 38 7 2224 2555 1491399 1491732 8.130000e-96 361.0
19 TraesCS4D01G088800 chr7D 94.488 508 27 1 2577 3084 459241060 459240554 0.000000e+00 782.0
20 TraesCS4D01G088800 chr7D 88.674 362 32 7 2224 2577 41749128 41748768 1.700000e-117 433.0
21 TraesCS4D01G088800 chr7D 88.022 359 37 5 2224 2577 135417342 135416985 1.320000e-113 420.0
22 TraesCS4D01G088800 chr7D 85.549 173 10 2 1 158 163001111 163001283 1.900000e-37 167.0
23 TraesCS4D01G088800 chr5D 94.477 507 28 0 2578 3084 108242407 108242913 0.000000e+00 782.0
24 TraesCS4D01G088800 chr5D 94.325 511 28 1 2575 3084 269540154 269540664 0.000000e+00 782.0
25 TraesCS4D01G088800 chr2B 89.722 360 32 4 2223 2577 545406158 545405799 3.630000e-124 455.0
26 TraesCS4D01G088800 chr2B 89.697 165 13 1 1 161 11202572 11202736 1.120000e-49 207.0
27 TraesCS4D01G088800 chr2D 88.268 358 36 6 2225 2577 542388501 542388857 1.020000e-114 424.0
28 TraesCS4D01G088800 chr2D 91.925 161 9 1 3 159 437917077 437916917 4.000000e-54 222.0
29 TraesCS4D01G088800 chr1D 87.466 367 37 7 2226 2584 272184809 272184444 6.150000e-112 414.0
30 TraesCS4D01G088800 chr1D 84.196 367 50 6 2218 2577 415052203 415051838 1.760000e-92 350.0
31 TraesCS4D01G088800 chr1D 89.222 167 11 4 1 163 299571302 299571139 5.210000e-48 202.0
32 TraesCS4D01G088800 chr1D 87.640 178 5 4 1 162 442055154 442055330 1.130000e-44 191.0
33 TraesCS4D01G088800 chr1D 100.000 53 0 0 1 53 298442525 298442473 7.040000e-17 99.0
34 TraesCS4D01G088800 chr6D 87.709 358 38 6 2226 2577 392589948 392589591 2.210000e-111 412.0
35 TraesCS4D01G088800 chr1B 87.778 360 31 8 2224 2578 595541315 595540964 2.860000e-110 409.0
36 TraesCS4D01G088800 chr7B 88.957 163 13 2 4 161 451299775 451299613 2.430000e-46 196.0
37 TraesCS4D01G088800 chr3A 93.130 131 5 1 35 161 575889552 575889682 4.060000e-44 189.0
38 TraesCS4D01G088800 chrUn 87.500 160 13 4 4 157 356995722 356995564 8.790000e-41 178.0
39 TraesCS4D01G088800 chr3B 85.799 169 16 5 4 166 808527051 808527217 4.090000e-39 172.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G088800 chr4D 64401425 64404508 3083 False 5696.000000 5696 100.000000 1 3084 1 chr4D.!!$F1 3083
1 TraesCS4D01G088800 chr4D 57502587 57503091 504 True 785.000000 785 94.675000 2578 3084 1 chr4D.!!$R2 506
2 TraesCS4D01G088800 chr4D 115488191 115488697 506 False 782.000000 782 94.477000 2578 3084 1 chr4D.!!$F3 506
3 TraesCS4D01G088800 chr4D 399839526 399840032 506 True 782.000000 782 94.477000 2578 3084 1 chr4D.!!$R3 506
4 TraesCS4D01G088800 chr4B 94945360 94951179 5819 False 452.966667 1273 92.695833 159 2223 6 chr4B.!!$F2 2064
5 TraesCS4D01G088800 chr4A 532073981 532075937 1956 True 745.000000 1264 86.442000 159 2210 3 chr4A.!!$R1 2051
6 TraesCS4D01G088800 chr3D 9978007 9978513 506 False 787.000000 787 94.675000 2578 3084 1 chr3D.!!$F2 506
7 TraesCS4D01G088800 chr3D 185312470 185312976 506 False 782.000000 782 94.477000 2578 3084 1 chr3D.!!$F3 506
8 TraesCS4D01G088800 chr7D 459240554 459241060 506 True 782.000000 782 94.488000 2577 3084 1 chr7D.!!$R3 507
9 TraesCS4D01G088800 chr5D 108242407 108242913 506 False 782.000000 782 94.477000 2578 3084 1 chr5D.!!$F1 506
10 TraesCS4D01G088800 chr5D 269540154 269540664 510 False 782.000000 782 94.325000 2575 3084 1 chr5D.!!$F2 509

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
157 158 0.038166 TGGGTCCATTGGAGTTGCTC 59.962 55.0 5.39 0.0 29.39 4.26 F
605 2431 0.168788 CAATGGCTACCACAGTTGCG 59.831 55.0 0.00 0.0 44.47 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1253 5031 0.02930 CAGAGAGCAGAGCGAGCTAC 59.971 60.0 0.0 0.0 43.58 3.58 R
2305 6140 0.03101 AGGCCCTAGTGACCCTAAGG 60.031 60.0 0.0 0.0 40.04 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 3.564027 CCGACGCAAATCCGGCTC 61.564 66.667 0.00 0.00 36.62 4.70
31 32 2.813474 CGACGCAAATCCGGCTCA 60.813 61.111 0.00 0.00 33.03 4.26
32 33 2.387445 CGACGCAAATCCGGCTCAA 61.387 57.895 0.00 0.00 33.03 3.02
33 34 1.873165 GACGCAAATCCGGCTCAAA 59.127 52.632 0.00 0.00 32.31 2.69
34 35 0.239879 GACGCAAATCCGGCTCAAAA 59.760 50.000 0.00 0.00 32.31 2.44
35 36 0.671251 ACGCAAATCCGGCTCAAAAA 59.329 45.000 0.00 0.00 0.00 1.94
36 37 1.272212 ACGCAAATCCGGCTCAAAAAT 59.728 42.857 0.00 0.00 0.00 1.82
37 38 1.655099 CGCAAATCCGGCTCAAAAATG 59.345 47.619 0.00 0.00 0.00 2.32
38 39 2.001872 GCAAATCCGGCTCAAAAATGG 58.998 47.619 0.00 0.00 0.00 3.16
39 40 2.620242 CAAATCCGGCTCAAAAATGGG 58.380 47.619 0.00 0.00 0.00 4.00
40 41 1.937191 AATCCGGCTCAAAAATGGGT 58.063 45.000 0.00 0.00 0.00 4.51
41 42 1.474330 ATCCGGCTCAAAAATGGGTC 58.526 50.000 0.00 0.00 0.00 4.46
42 43 0.958382 TCCGGCTCAAAAATGGGTCG 60.958 55.000 0.00 0.00 0.00 4.79
43 44 1.154035 CGGCTCAAAAATGGGTCGC 60.154 57.895 0.00 0.00 0.00 5.19
44 45 1.215382 GGCTCAAAAATGGGTCGCC 59.785 57.895 0.00 0.00 0.00 5.54
45 46 1.215382 GCTCAAAAATGGGTCGCCC 59.785 57.895 7.87 7.87 45.71 6.13
63 64 4.130281 GCGGACGAAAAGCGGACG 62.130 66.667 0.00 0.00 46.49 4.79
64 65 4.130281 CGGACGAAAAGCGGACGC 62.130 66.667 8.91 8.91 46.49 5.19
83 84 4.973055 CGTCCGTTTGGGTCGGCA 62.973 66.667 0.00 0.00 46.49 5.69
84 85 3.351416 GTCCGTTTGGGTCGGCAC 61.351 66.667 0.00 0.00 46.49 5.01
85 86 4.973055 TCCGTTTGGGTCGGCACG 62.973 66.667 0.00 0.00 46.49 5.34
97 98 2.665185 GGCACGTTGAGCCGACTT 60.665 61.111 0.00 0.00 43.15 3.01
98 99 2.251642 GGCACGTTGAGCCGACTTT 61.252 57.895 0.00 0.00 43.15 2.66
99 100 1.647084 GCACGTTGAGCCGACTTTT 59.353 52.632 0.00 0.00 0.00 2.27
100 101 0.384353 GCACGTTGAGCCGACTTTTC 60.384 55.000 0.00 0.00 0.00 2.29
101 102 1.217882 CACGTTGAGCCGACTTTTCT 58.782 50.000 0.00 0.00 0.00 2.52
102 103 1.070577 CACGTTGAGCCGACTTTTCTG 60.071 52.381 0.00 0.00 0.00 3.02
103 104 1.217882 CGTTGAGCCGACTTTTCTGT 58.782 50.000 0.00 0.00 0.00 3.41
104 105 1.597663 CGTTGAGCCGACTTTTCTGTT 59.402 47.619 0.00 0.00 0.00 3.16
105 106 2.348591 CGTTGAGCCGACTTTTCTGTTC 60.349 50.000 0.00 0.00 0.00 3.18
106 107 1.497991 TGAGCCGACTTTTCTGTTCG 58.502 50.000 0.00 0.00 0.00 3.95
107 108 0.164002 GAGCCGACTTTTCTGTTCGC 59.836 55.000 0.00 0.00 0.00 4.70
108 109 1.154654 GCCGACTTTTCTGTTCGCG 60.155 57.895 0.00 0.00 0.00 5.87
109 110 1.154654 CCGACTTTTCTGTTCGCGC 60.155 57.895 0.00 0.00 0.00 6.86
110 111 1.154654 CGACTTTTCTGTTCGCGCC 60.155 57.895 0.00 0.00 0.00 6.53
111 112 1.154654 GACTTTTCTGTTCGCGCCG 60.155 57.895 0.00 0.00 0.00 6.46
112 113 1.554042 GACTTTTCTGTTCGCGCCGA 61.554 55.000 0.00 0.00 0.00 5.54
113 114 1.154654 CTTTTCTGTTCGCGCCGAC 60.155 57.895 0.00 0.48 34.89 4.79
114 115 2.494504 CTTTTCTGTTCGCGCCGACC 62.495 60.000 0.00 0.00 34.89 4.79
118 119 4.912485 TGTTCGCGCCGACCCAAA 62.912 61.111 0.00 0.00 34.89 3.28
119 120 4.379143 GTTCGCGCCGACCCAAAC 62.379 66.667 0.00 0.00 34.89 2.93
150 151 2.122783 GACGAAATGGGTCCATTGGA 57.877 50.000 15.15 0.00 44.86 3.53
151 152 2.017049 GACGAAATGGGTCCATTGGAG 58.983 52.381 15.15 11.72 44.86 3.86
152 153 1.354368 ACGAAATGGGTCCATTGGAGT 59.646 47.619 15.15 12.25 44.86 3.85
153 154 2.225017 ACGAAATGGGTCCATTGGAGTT 60.225 45.455 15.15 0.23 44.86 3.01
154 155 2.164219 CGAAATGGGTCCATTGGAGTTG 59.836 50.000 15.15 1.37 44.86 3.16
155 156 1.560505 AATGGGTCCATTGGAGTTGC 58.439 50.000 13.85 0.00 44.05 4.17
156 157 0.706433 ATGGGTCCATTGGAGTTGCT 59.294 50.000 5.39 0.00 31.82 3.91
157 158 0.038166 TGGGTCCATTGGAGTTGCTC 59.962 55.000 5.39 0.00 29.39 4.26
203 204 1.214367 TTTTGTCCGTCTCTTGCGAC 58.786 50.000 0.00 0.00 0.00 5.19
206 207 2.599281 TCCGTCTCTTGCGACCCA 60.599 61.111 0.00 0.00 0.00 4.51
274 275 2.443957 GAAGCTGACAACAACGCCGG 62.444 60.000 0.00 0.00 0.00 6.13
330 764 4.025401 GTTTGCGCCCACAGGTCG 62.025 66.667 4.18 0.00 36.25 4.79
350 2167 0.174389 CCACAGAGATGACACGGGAG 59.826 60.000 0.00 0.00 0.00 4.30
357 2174 2.185310 GATGACACGGGAGCTGGGTT 62.185 60.000 0.00 0.00 0.00 4.11
375 2192 3.132111 GGGTTGTGCCTTTTCTTTCTTGA 59.868 43.478 0.00 0.00 37.43 3.02
380 2197 3.312697 GTGCCTTTTCTTTCTTGACGACT 59.687 43.478 0.00 0.00 0.00 4.18
391 2209 7.861630 TCTTTCTTGACGACTAATTTTCCAAG 58.138 34.615 0.00 0.00 0.00 3.61
424 2242 5.414144 GGAGAAAGGAAGGTTCTGAATCTTG 59.586 44.000 19.94 0.00 35.46 3.02
458 2276 5.244851 TGGCAATATGCTAAGTTGGACAAAA 59.755 36.000 2.00 0.00 44.28 2.44
509 2327 0.533755 ATAGGCAAGAGGACGCATGC 60.534 55.000 7.91 7.91 38.06 4.06
573 2399 2.028930 ACAACCCGCAGAAAACAACAAA 60.029 40.909 0.00 0.00 0.00 2.83
598 2424 4.916983 TTGCATTATCAATGGCTACCAC 57.083 40.909 0.00 0.00 39.31 4.16
605 2431 0.168788 CAATGGCTACCACAGTTGCG 59.831 55.000 0.00 0.00 44.47 4.85
618 2444 4.142902 CCACAGTTGCGAAGTTGGTATTAG 60.143 45.833 0.00 0.00 0.00 1.73
629 2455 7.270579 GCGAAGTTGGTATTAGTTTTTGACATC 59.729 37.037 0.00 0.00 0.00 3.06
632 2458 9.744468 AAGTTGGTATTAGTTTTTGACATCAAC 57.256 29.630 0.00 0.00 35.28 3.18
661 2487 8.987890 GGATAAATGAAGAAGAGAGCATAGAAC 58.012 37.037 0.00 0.00 0.00 3.01
672 2498 2.866762 GAGCATAGAACAATGGACGACC 59.133 50.000 0.00 0.00 0.00 4.79
712 2544 4.251760 CTATCCAAGCTAGGCGCG 57.748 61.111 0.00 0.00 45.59 6.86
714 2546 3.515316 TATCCAAGCTAGGCGCGGC 62.515 63.158 27.06 27.06 45.59 6.53
741 2573 1.230324 GCTCTGTTCAGTTCACCACC 58.770 55.000 0.00 0.00 0.00 4.61
742 2574 1.202698 GCTCTGTTCAGTTCACCACCT 60.203 52.381 0.00 0.00 0.00 4.00
828 4346 4.390603 GGTCCAGTTTGTTTGTTTGTTTCC 59.609 41.667 0.00 0.00 0.00 3.13
831 4349 5.011125 TCCAGTTTGTTTGTTTGTTTCCTGA 59.989 36.000 0.00 0.00 0.00 3.86
881 4405 5.449725 GGCTTTCTGTCTGCTGGATATTTTC 60.450 44.000 0.00 0.00 0.00 2.29
884 4408 3.523157 TCTGTCTGCTGGATATTTTCCCA 59.477 43.478 0.00 0.00 44.77 4.37
967 4491 2.225792 GCTCCTCCTTGGTGGCTAT 58.774 57.895 3.05 0.00 37.07 2.97
998 4739 1.334869 CGGACTGAATTATTGCCAGCC 59.665 52.381 0.00 0.00 0.00 4.85
1142 4885 1.751563 GGAGAGGATAGGCACAGGC 59.248 63.158 0.00 0.00 40.13 4.85
1143 4886 1.365633 GAGAGGATAGGCACAGGCG 59.634 63.158 0.00 0.00 42.47 5.52
1146 4889 2.280457 GGATAGGCACAGGCGAGC 60.280 66.667 0.00 0.00 42.47 5.03
1253 5031 1.668919 CGTATCCATCCGATGTTCCCG 60.669 57.143 7.60 1.39 31.92 5.14
1286 5064 5.468072 TCTGCTCTCTGTGAAATGAAAGTTC 59.532 40.000 0.00 0.00 42.13 3.01
1299 5077 1.450905 GAAAGTTCGGTCAACTCGTCG 59.549 52.381 0.00 0.00 45.32 5.12
1340 5118 4.444306 CCGGAGAGGTGGATTAATTAGCAA 60.444 45.833 0.00 0.00 34.51 3.91
1369 5147 3.879892 GAGTTTATCTGATGGCCTGAACC 59.120 47.826 3.32 0.00 0.00 3.62
1389 5167 0.404040 AAGATTTCGGTTGCCTCCCA 59.596 50.000 0.00 0.00 0.00 4.37
1390 5168 0.625849 AGATTTCGGTTGCCTCCCAT 59.374 50.000 0.00 0.00 0.00 4.00
1391 5169 1.025041 GATTTCGGTTGCCTCCCATC 58.975 55.000 0.00 0.00 0.00 3.51
1392 5170 0.748005 ATTTCGGTTGCCTCCCATCG 60.748 55.000 0.00 0.00 0.00 3.84
1393 5171 2.813226 TTTCGGTTGCCTCCCATCGG 62.813 60.000 0.00 0.00 0.00 4.18
1399 5177 2.830370 GCCTCCCATCGGCCTTTG 60.830 66.667 0.00 0.00 41.73 2.77
1400 5178 2.830370 CCTCCCATCGGCCTTTGC 60.830 66.667 0.00 0.00 0.00 3.68
1417 5208 0.313672 TGCCGGCTGTTTTGCTAAAG 59.686 50.000 29.70 0.00 0.00 1.85
1420 5211 2.030628 GCCGGCTGTTTTGCTAAAGTAA 60.031 45.455 22.15 0.00 0.00 2.24
1440 5231 1.597742 ATCTGGTGCTTGTGTGTGAC 58.402 50.000 0.00 0.00 0.00 3.67
1633 5453 2.899976 TCGTCTTCTGTTGCTCAAACA 58.100 42.857 0.00 0.00 46.66 2.83
1856 5676 1.734748 GCTACCAGCTAGACCGACC 59.265 63.158 0.00 0.00 38.45 4.79
1857 5677 2.023318 CTACCAGCTAGACCGACCG 58.977 63.158 0.00 0.00 0.00 4.79
1937 5770 2.002586 CTGTATTGGAACTGTGCGAGG 58.997 52.381 0.00 0.00 0.00 4.63
2041 5874 4.168792 ACAAACGTAAACTCGACGAAAC 57.831 40.909 0.00 0.00 42.98 2.78
2045 5878 1.782569 CGTAAACTCGACGAAACTGCA 59.217 47.619 0.00 0.00 42.98 4.41
2110 5945 6.451064 TGTAGATACTGTGTACTGATGTGG 57.549 41.667 0.00 0.00 0.00 4.17
2114 5949 3.667497 ACTGTGTACTGATGTGGACTG 57.333 47.619 0.00 0.00 0.00 3.51
2211 6046 5.533154 AGCTACACTACACACATATCTCTCC 59.467 44.000 0.00 0.00 0.00 3.71
2220 6055 5.139727 CACACATATCTCTCCCTCTCTCTT 58.860 45.833 0.00 0.00 0.00 2.85
2221 6056 5.241506 CACACATATCTCTCCCTCTCTCTTC 59.758 48.000 0.00 0.00 0.00 2.87
2222 6057 5.134339 ACACATATCTCTCCCTCTCTCTTCT 59.866 44.000 0.00 0.00 0.00 2.85
2224 6059 6.550854 CACATATCTCTCCCTCTCTCTTCTTT 59.449 42.308 0.00 0.00 0.00 2.52
2225 6060 7.069826 CACATATCTCTCCCTCTCTCTTCTTTT 59.930 40.741 0.00 0.00 0.00 2.27
2226 6061 7.623278 ACATATCTCTCCCTCTCTCTTCTTTTT 59.377 37.037 0.00 0.00 0.00 1.94
2248 6083 4.764050 TTTTGGAAAAGGAGGAAAACCC 57.236 40.909 0.00 0.00 0.00 4.11
2249 6084 2.391926 TGGAAAAGGAGGAAAACCCC 57.608 50.000 0.00 0.00 34.66 4.95
2250 6085 1.576272 TGGAAAAGGAGGAAAACCCCA 59.424 47.619 0.00 0.00 34.66 4.96
2251 6086 2.248248 GGAAAAGGAGGAAAACCCCAG 58.752 52.381 0.00 0.00 34.66 4.45
2252 6087 1.618837 GAAAAGGAGGAAAACCCCAGC 59.381 52.381 0.00 0.00 34.66 4.85
2253 6088 0.178932 AAAGGAGGAAAACCCCAGCC 60.179 55.000 0.00 0.00 34.66 4.85
2254 6089 1.074296 AAGGAGGAAAACCCCAGCCT 61.074 55.000 0.00 0.00 35.59 4.58
2255 6090 1.000771 GGAGGAAAACCCCAGCCTC 60.001 63.158 0.00 0.00 44.84 4.70
2256 6091 1.501654 GGAGGAAAACCCCAGCCTCT 61.502 60.000 0.00 0.00 44.91 3.69
2257 6092 0.322906 GAGGAAAACCCCAGCCTCTG 60.323 60.000 0.00 0.00 42.81 3.35
2258 6093 1.979155 GGAAAACCCCAGCCTCTGC 60.979 63.158 0.00 0.00 37.95 4.26
2259 6094 1.228552 GAAAACCCCAGCCTCTGCA 60.229 57.895 0.00 0.00 41.13 4.41
2260 6095 0.613012 GAAAACCCCAGCCTCTGCAT 60.613 55.000 0.00 0.00 41.13 3.96
2261 6096 0.613012 AAAACCCCAGCCTCTGCATC 60.613 55.000 0.00 0.00 41.13 3.91
2262 6097 1.792757 AAACCCCAGCCTCTGCATCA 61.793 55.000 0.00 0.00 41.13 3.07
2263 6098 1.792757 AACCCCAGCCTCTGCATCAA 61.793 55.000 0.00 0.00 41.13 2.57
2264 6099 1.229359 CCCCAGCCTCTGCATCAAT 59.771 57.895 0.00 0.00 41.13 2.57
2265 6100 0.822532 CCCCAGCCTCTGCATCAATC 60.823 60.000 0.00 0.00 41.13 2.67
2266 6101 0.822532 CCCAGCCTCTGCATCAATCC 60.823 60.000 0.00 0.00 41.13 3.01
2267 6102 0.106868 CCAGCCTCTGCATCAATCCA 60.107 55.000 0.00 0.00 41.13 3.41
2268 6103 1.478837 CCAGCCTCTGCATCAATCCAT 60.479 52.381 0.00 0.00 41.13 3.41
2269 6104 1.609072 CAGCCTCTGCATCAATCCATG 59.391 52.381 0.00 0.00 41.13 3.66
2278 6113 3.013276 CATCAATCCATGCATGCAGTC 57.987 47.619 26.69 0.00 0.00 3.51
2279 6114 2.131776 TCAATCCATGCATGCAGTCA 57.868 45.000 26.69 11.96 0.00 3.41
2280 6115 2.661718 TCAATCCATGCATGCAGTCAT 58.338 42.857 26.69 13.75 0.00 3.06
2281 6116 2.621526 TCAATCCATGCATGCAGTCATC 59.378 45.455 26.69 0.00 0.00 2.92
2282 6117 2.623416 CAATCCATGCATGCAGTCATCT 59.377 45.455 26.69 4.78 0.00 2.90
2283 6118 2.430248 TCCATGCATGCAGTCATCTT 57.570 45.000 26.69 3.94 0.00 2.40
2284 6119 3.564053 TCCATGCATGCAGTCATCTTA 57.436 42.857 26.69 0.00 0.00 2.10
2285 6120 4.094830 TCCATGCATGCAGTCATCTTAT 57.905 40.909 26.69 2.26 0.00 1.73
2286 6121 4.466827 TCCATGCATGCAGTCATCTTATT 58.533 39.130 26.69 1.43 0.00 1.40
2287 6122 5.623169 TCCATGCATGCAGTCATCTTATTA 58.377 37.500 26.69 0.00 0.00 0.98
2288 6123 6.063404 TCCATGCATGCAGTCATCTTATTAA 58.937 36.000 26.69 0.00 0.00 1.40
2289 6124 6.016860 TCCATGCATGCAGTCATCTTATTAAC 60.017 38.462 26.69 0.00 0.00 2.01
2290 6125 6.238814 CCATGCATGCAGTCATCTTATTAACA 60.239 38.462 26.69 0.00 0.00 2.41
2291 6126 6.756299 TGCATGCAGTCATCTTATTAACAA 57.244 33.333 18.46 0.00 0.00 2.83
2292 6127 7.337480 TGCATGCAGTCATCTTATTAACAAT 57.663 32.000 18.46 0.00 0.00 2.71
2293 6128 8.449251 TGCATGCAGTCATCTTATTAACAATA 57.551 30.769 18.46 0.00 0.00 1.90
2294 6129 8.901793 TGCATGCAGTCATCTTATTAACAATAA 58.098 29.630 18.46 0.00 32.70 1.40
2295 6130 9.734620 GCATGCAGTCATCTTATTAACAATAAA 57.265 29.630 14.21 0.00 33.26 1.40
2311 6146 7.462571 AACAATAAAGTACCAAAGCCTTAGG 57.537 36.000 0.00 0.00 0.00 2.69
2312 6147 5.949952 ACAATAAAGTACCAAAGCCTTAGGG 59.050 40.000 0.00 0.00 0.00 3.53
2313 6148 5.791303 ATAAAGTACCAAAGCCTTAGGGT 57.209 39.130 0.00 0.00 37.43 4.34
2314 6149 3.715638 AAGTACCAAAGCCTTAGGGTC 57.284 47.619 2.49 0.00 34.88 4.46
2315 6150 2.627933 AGTACCAAAGCCTTAGGGTCA 58.372 47.619 2.49 0.00 34.88 4.02
2316 6151 2.305052 AGTACCAAAGCCTTAGGGTCAC 59.695 50.000 2.49 0.00 34.88 3.67
2317 6152 1.446016 ACCAAAGCCTTAGGGTCACT 58.554 50.000 2.49 0.00 30.76 3.41
2318 6153 2.627933 ACCAAAGCCTTAGGGTCACTA 58.372 47.619 2.49 0.00 30.76 2.74
2319 6154 2.572104 ACCAAAGCCTTAGGGTCACTAG 59.428 50.000 2.49 0.00 32.16 2.57
2320 6155 2.092914 CCAAAGCCTTAGGGTCACTAGG 60.093 54.545 2.49 0.00 32.16 3.02
2323 6158 2.529312 CCTTAGGGTCACTAGGGCC 58.471 63.158 0.00 0.00 41.40 5.80
2324 6159 0.031010 CCTTAGGGTCACTAGGGCCT 60.031 60.000 12.58 12.58 41.40 5.19
2325 6160 1.219724 CCTTAGGGTCACTAGGGCCTA 59.780 57.143 13.73 13.73 41.40 3.93
2326 6161 2.158143 CCTTAGGGTCACTAGGGCCTAT 60.158 54.545 14.95 0.00 41.40 2.57
2327 6162 3.077088 CCTTAGGGTCACTAGGGCCTATA 59.923 52.174 14.95 0.00 41.40 1.31
2328 6163 4.450265 CCTTAGGGTCACTAGGGCCTATAA 60.450 50.000 14.95 7.01 41.40 0.98
2329 6164 3.945283 AGGGTCACTAGGGCCTATAAT 57.055 47.619 14.95 0.00 0.00 1.28
2330 6165 3.792515 AGGGTCACTAGGGCCTATAATC 58.207 50.000 14.95 2.76 0.00 1.75
2331 6166 3.144125 AGGGTCACTAGGGCCTATAATCA 59.856 47.826 14.95 0.00 0.00 2.57
2332 6167 4.104831 GGGTCACTAGGGCCTATAATCAT 58.895 47.826 14.95 0.00 0.00 2.45
2333 6168 5.017431 AGGGTCACTAGGGCCTATAATCATA 59.983 44.000 14.95 0.00 0.00 2.15
2334 6169 5.364157 GGGTCACTAGGGCCTATAATCATAG 59.636 48.000 14.95 3.71 34.92 2.23
2335 6170 5.958987 GGTCACTAGGGCCTATAATCATAGT 59.041 44.000 14.95 4.44 33.51 2.12
2336 6171 6.127310 GGTCACTAGGGCCTATAATCATAGTG 60.127 46.154 14.95 17.11 39.82 2.74
2337 6172 5.422331 TCACTAGGGCCTATAATCATAGTGC 59.578 44.000 19.38 0.00 38.85 4.40
2338 6173 5.187772 CACTAGGGCCTATAATCATAGTGCA 59.812 44.000 14.95 0.00 34.85 4.57
2339 6174 5.785423 ACTAGGGCCTATAATCATAGTGCAA 59.215 40.000 14.95 0.00 34.85 4.08
2340 6175 5.582950 AGGGCCTATAATCATAGTGCAAA 57.417 39.130 2.82 0.00 34.85 3.68
2341 6176 5.952387 AGGGCCTATAATCATAGTGCAAAA 58.048 37.500 2.82 0.00 34.85 2.44
2342 6177 5.770162 AGGGCCTATAATCATAGTGCAAAAC 59.230 40.000 2.82 0.00 34.85 2.43
2343 6178 5.334879 GGGCCTATAATCATAGTGCAAAACG 60.335 44.000 0.84 0.00 34.85 3.60
2344 6179 5.468746 GGCCTATAATCATAGTGCAAAACGA 59.531 40.000 0.00 0.00 34.85 3.85
2345 6180 6.017440 GGCCTATAATCATAGTGCAAAACGAA 60.017 38.462 0.00 0.00 34.85 3.85
2346 6181 7.414436 GCCTATAATCATAGTGCAAAACGAAA 58.586 34.615 0.00 0.00 34.06 3.46
2347 6182 8.076178 GCCTATAATCATAGTGCAAAACGAAAT 58.924 33.333 0.00 0.00 34.06 2.17
2353 6188 9.469807 AATCATAGTGCAAAACGAAATAAAACA 57.530 25.926 0.00 0.00 0.00 2.83
2354 6189 8.858003 TCATAGTGCAAAACGAAATAAAACAA 57.142 26.923 0.00 0.00 0.00 2.83
2355 6190 9.302345 TCATAGTGCAAAACGAAATAAAACAAA 57.698 25.926 0.00 0.00 0.00 2.83
2356 6191 9.566624 CATAGTGCAAAACGAAATAAAACAAAG 57.433 29.630 0.00 0.00 0.00 2.77
2357 6192 7.820044 AGTGCAAAACGAAATAAAACAAAGA 57.180 28.000 0.00 0.00 0.00 2.52
2358 6193 8.245701 AGTGCAAAACGAAATAAAACAAAGAA 57.754 26.923 0.00 0.00 0.00 2.52
2359 6194 8.713271 AGTGCAAAACGAAATAAAACAAAGAAA 58.287 25.926 0.00 0.00 0.00 2.52
2360 6195 8.984678 GTGCAAAACGAAATAAAACAAAGAAAG 58.015 29.630 0.00 0.00 0.00 2.62
2361 6196 8.926710 TGCAAAACGAAATAAAACAAAGAAAGA 58.073 25.926 0.00 0.00 0.00 2.52
2362 6197 9.914923 GCAAAACGAAATAAAACAAAGAAAGAT 57.085 25.926 0.00 0.00 0.00 2.40
2364 6199 9.914923 AAAACGAAATAAAACAAAGAAAGATGC 57.085 25.926 0.00 0.00 0.00 3.91
2365 6200 7.637709 ACGAAATAAAACAAAGAAAGATGCC 57.362 32.000 0.00 0.00 0.00 4.40
2366 6201 7.206687 ACGAAATAAAACAAAGAAAGATGCCA 58.793 30.769 0.00 0.00 0.00 4.92
2367 6202 7.169140 ACGAAATAAAACAAAGAAAGATGCCAC 59.831 33.333 0.00 0.00 0.00 5.01
2368 6203 7.168972 CGAAATAAAACAAAGAAAGATGCCACA 59.831 33.333 0.00 0.00 0.00 4.17
2369 6204 8.907222 AAATAAAACAAAGAAAGATGCCACAT 57.093 26.923 0.00 0.00 0.00 3.21
2370 6205 8.538409 AATAAAACAAAGAAAGATGCCACATC 57.462 30.769 0.00 0.00 0.00 3.06
2371 6206 4.525912 AACAAAGAAAGATGCCACATCC 57.474 40.909 4.00 0.00 0.00 3.51
2372 6207 2.489329 ACAAAGAAAGATGCCACATCCG 59.511 45.455 4.00 0.00 0.00 4.18
2373 6208 1.755179 AAGAAAGATGCCACATCCGG 58.245 50.000 0.00 0.00 0.00 5.14
2380 6215 3.053291 GCCACATCCGGCGAAACA 61.053 61.111 9.30 0.00 43.52 2.83
2381 6216 3.039202 GCCACATCCGGCGAAACAG 62.039 63.158 9.30 0.00 43.52 3.16
2382 6217 1.375396 CCACATCCGGCGAAACAGA 60.375 57.895 9.30 0.00 0.00 3.41
2383 6218 0.744414 CCACATCCGGCGAAACAGAT 60.744 55.000 9.30 0.00 0.00 2.90
2384 6219 0.652592 CACATCCGGCGAAACAGATC 59.347 55.000 9.30 0.00 0.00 2.75
2385 6220 0.249120 ACATCCGGCGAAACAGATCA 59.751 50.000 9.30 0.00 0.00 2.92
2386 6221 0.933097 CATCCGGCGAAACAGATCAG 59.067 55.000 9.30 0.00 0.00 2.90
2387 6222 0.179073 ATCCGGCGAAACAGATCAGG 60.179 55.000 9.30 0.00 0.00 3.86
2388 6223 1.079127 CCGGCGAAACAGATCAGGT 60.079 57.895 9.30 0.00 0.00 4.00
2389 6224 0.673644 CCGGCGAAACAGATCAGGTT 60.674 55.000 9.30 0.00 0.00 3.50
2390 6225 1.404986 CCGGCGAAACAGATCAGGTTA 60.405 52.381 9.30 0.00 0.00 2.85
2391 6226 1.659098 CGGCGAAACAGATCAGGTTAC 59.341 52.381 0.00 0.00 0.00 2.50
2392 6227 1.659098 GGCGAAACAGATCAGGTTACG 59.341 52.381 0.00 0.00 0.00 3.18
2393 6228 2.602878 GCGAAACAGATCAGGTTACGA 58.397 47.619 10.35 0.00 0.00 3.43
2394 6229 3.187700 GCGAAACAGATCAGGTTACGAT 58.812 45.455 10.35 0.00 0.00 3.73
2395 6230 3.000322 GCGAAACAGATCAGGTTACGATG 60.000 47.826 10.35 0.00 0.00 3.84
2396 6231 3.000322 CGAAACAGATCAGGTTACGATGC 60.000 47.826 0.00 0.00 0.00 3.91
2397 6232 2.604046 ACAGATCAGGTTACGATGCC 57.396 50.000 0.00 0.00 0.00 4.40
2398 6233 2.111384 ACAGATCAGGTTACGATGCCT 58.889 47.619 0.00 0.00 35.04 4.75
2399 6234 3.296854 ACAGATCAGGTTACGATGCCTA 58.703 45.455 0.00 0.00 33.07 3.93
2400 6235 3.898123 ACAGATCAGGTTACGATGCCTAT 59.102 43.478 0.00 0.00 33.07 2.57
2401 6236 5.077564 ACAGATCAGGTTACGATGCCTATA 58.922 41.667 0.00 0.00 33.07 1.31
2402 6237 5.047943 ACAGATCAGGTTACGATGCCTATAC 60.048 44.000 0.00 0.00 33.07 1.47
2403 6238 5.048013 CAGATCAGGTTACGATGCCTATACA 60.048 44.000 0.00 0.00 33.07 2.29
2404 6239 4.579454 TCAGGTTACGATGCCTATACAC 57.421 45.455 0.00 0.00 33.07 2.90
2405 6240 3.319972 TCAGGTTACGATGCCTATACACC 59.680 47.826 0.00 0.00 33.07 4.16
2406 6241 3.321111 CAGGTTACGATGCCTATACACCT 59.679 47.826 0.00 0.00 33.49 4.00
2407 6242 4.521639 CAGGTTACGATGCCTATACACCTA 59.478 45.833 0.00 0.00 31.96 3.08
2408 6243 4.765856 AGGTTACGATGCCTATACACCTAG 59.234 45.833 0.00 0.00 31.39 3.02
2409 6244 4.483311 GTTACGATGCCTATACACCTAGC 58.517 47.826 0.00 0.00 0.00 3.42
2410 6245 1.893801 ACGATGCCTATACACCTAGCC 59.106 52.381 0.00 0.00 0.00 3.93
2411 6246 2.171840 CGATGCCTATACACCTAGCCT 58.828 52.381 0.00 0.00 0.00 4.58
2412 6247 3.245158 ACGATGCCTATACACCTAGCCTA 60.245 47.826 0.00 0.00 0.00 3.93
2413 6248 3.954904 CGATGCCTATACACCTAGCCTAT 59.045 47.826 0.00 0.00 0.00 2.57
2414 6249 4.402793 CGATGCCTATACACCTAGCCTATT 59.597 45.833 0.00 0.00 0.00 1.73
2415 6250 5.593095 CGATGCCTATACACCTAGCCTATTA 59.407 44.000 0.00 0.00 0.00 0.98
2416 6251 6.265649 CGATGCCTATACACCTAGCCTATTAT 59.734 42.308 0.00 0.00 0.00 1.28
2417 6252 7.522399 CGATGCCTATACACCTAGCCTATTATC 60.522 44.444 0.00 0.00 0.00 1.75
2418 6253 6.499436 TGCCTATACACCTAGCCTATTATCA 58.501 40.000 0.00 0.00 0.00 2.15
2419 6254 6.607600 TGCCTATACACCTAGCCTATTATCAG 59.392 42.308 0.00 0.00 0.00 2.90
2420 6255 6.461788 GCCTATACACCTAGCCTATTATCAGC 60.462 46.154 0.00 0.00 0.00 4.26
2421 6256 6.607600 CCTATACACCTAGCCTATTATCAGCA 59.392 42.308 0.00 0.00 0.00 4.41
2422 6257 4.608948 ACACCTAGCCTATTATCAGCAC 57.391 45.455 0.00 0.00 0.00 4.40
2423 6258 3.005897 ACACCTAGCCTATTATCAGCACG 59.994 47.826 0.00 0.00 0.00 5.34
2424 6259 3.005897 CACCTAGCCTATTATCAGCACGT 59.994 47.826 0.00 0.00 0.00 4.49
2425 6260 3.256136 ACCTAGCCTATTATCAGCACGTC 59.744 47.826 0.00 0.00 0.00 4.34
2426 6261 3.255888 CCTAGCCTATTATCAGCACGTCA 59.744 47.826 0.00 0.00 0.00 4.35
2427 6262 4.081972 CCTAGCCTATTATCAGCACGTCAT 60.082 45.833 0.00 0.00 0.00 3.06
2428 6263 3.919216 AGCCTATTATCAGCACGTCATC 58.081 45.455 0.00 0.00 0.00 2.92
2429 6264 2.996621 GCCTATTATCAGCACGTCATCC 59.003 50.000 0.00 0.00 0.00 3.51
2430 6265 3.554960 GCCTATTATCAGCACGTCATCCA 60.555 47.826 0.00 0.00 0.00 3.41
2431 6266 4.631131 CCTATTATCAGCACGTCATCCAA 58.369 43.478 0.00 0.00 0.00 3.53
2432 6267 5.056480 CCTATTATCAGCACGTCATCCAAA 58.944 41.667 0.00 0.00 0.00 3.28
2433 6268 5.702670 CCTATTATCAGCACGTCATCCAAAT 59.297 40.000 0.00 0.00 0.00 2.32
2434 6269 5.679734 ATTATCAGCACGTCATCCAAATC 57.320 39.130 0.00 0.00 0.00 2.17
2435 6270 1.358877 TCAGCACGTCATCCAAATCG 58.641 50.000 0.00 0.00 0.00 3.34
2436 6271 0.374758 CAGCACGTCATCCAAATCGG 59.625 55.000 0.00 0.00 0.00 4.18
2437 6272 1.062525 GCACGTCATCCAAATCGGC 59.937 57.895 0.00 0.00 33.14 5.54
2438 6273 1.369091 GCACGTCATCCAAATCGGCT 61.369 55.000 0.00 0.00 33.14 5.52
2439 6274 0.374758 CACGTCATCCAAATCGGCTG 59.625 55.000 0.00 0.00 31.68 4.85
2440 6275 0.249120 ACGTCATCCAAATCGGCTGA 59.751 50.000 0.00 0.00 37.58 4.26
2441 6276 1.338674 ACGTCATCCAAATCGGCTGAA 60.339 47.619 0.00 0.00 41.54 3.02
2442 6277 1.328680 CGTCATCCAAATCGGCTGAAG 59.671 52.381 0.00 0.00 41.54 3.02
2443 6278 2.632377 GTCATCCAAATCGGCTGAAGA 58.368 47.619 0.00 0.00 41.54 2.87
2444 6279 3.209410 GTCATCCAAATCGGCTGAAGAT 58.791 45.455 0.00 0.00 41.54 2.40
2445 6280 4.380531 GTCATCCAAATCGGCTGAAGATA 58.619 43.478 0.00 0.00 41.54 1.98
2446 6281 4.450419 GTCATCCAAATCGGCTGAAGATAG 59.550 45.833 0.00 0.00 41.54 2.08
2447 6282 2.838736 TCCAAATCGGCTGAAGATAGC 58.161 47.619 0.00 0.00 42.94 2.97
2453 6288 3.724494 GCTGAAGATAGCCCGTGC 58.276 61.111 0.00 0.00 37.73 5.34
2454 6289 1.889573 GCTGAAGATAGCCCGTGCC 60.890 63.158 0.00 0.00 37.73 5.01
2455 6290 1.522092 CTGAAGATAGCCCGTGCCA 59.478 57.895 0.00 0.00 38.69 4.92
2456 6291 0.811616 CTGAAGATAGCCCGTGCCAC 60.812 60.000 0.00 0.00 38.69 5.01
2457 6292 1.523938 GAAGATAGCCCGTGCCACC 60.524 63.158 0.00 0.00 38.69 4.61
2458 6293 3.385749 AAGATAGCCCGTGCCACCG 62.386 63.158 0.00 0.00 38.69 4.94
2459 6294 4.157120 GATAGCCCGTGCCACCGT 62.157 66.667 0.00 0.00 38.69 4.83
2460 6295 4.157120 ATAGCCCGTGCCACCGTC 62.157 66.667 0.00 0.00 38.69 4.79
2464 6299 4.436998 CCCGTGCCACCGTCTCTC 62.437 72.222 0.00 0.00 0.00 3.20
2465 6300 3.680786 CCGTGCCACCGTCTCTCA 61.681 66.667 0.00 0.00 0.00 3.27
2466 6301 2.338620 CGTGCCACCGTCTCTCAA 59.661 61.111 0.00 0.00 0.00 3.02
2467 6302 1.079819 CGTGCCACCGTCTCTCAAT 60.080 57.895 0.00 0.00 0.00 2.57
2468 6303 1.354337 CGTGCCACCGTCTCTCAATG 61.354 60.000 0.00 0.00 0.00 2.82
2469 6304 1.021390 GTGCCACCGTCTCTCAATGG 61.021 60.000 0.00 0.00 0.00 3.16
2470 6305 1.296715 GCCACCGTCTCTCAATGGT 59.703 57.895 0.00 0.00 39.17 3.55
2471 6306 0.321653 GCCACCGTCTCTCAATGGTT 60.322 55.000 0.00 0.00 36.36 3.67
2472 6307 1.442769 CCACCGTCTCTCAATGGTTG 58.557 55.000 0.00 0.00 36.36 3.77
2473 6308 0.798776 CACCGTCTCTCAATGGTTGC 59.201 55.000 0.00 0.00 36.36 4.17
2474 6309 0.396435 ACCGTCTCTCAATGGTTGCA 59.604 50.000 0.00 0.00 34.83 4.08
2475 6310 0.798776 CCGTCTCTCAATGGTTGCAC 59.201 55.000 0.00 0.00 0.00 4.57
2476 6311 0.798776 CGTCTCTCAATGGTTGCACC 59.201 55.000 0.00 0.00 39.22 5.01
2477 6312 1.168714 GTCTCTCAATGGTTGCACCC 58.831 55.000 0.00 0.00 37.50 4.61
2478 6313 0.770499 TCTCTCAATGGTTGCACCCA 59.230 50.000 5.05 5.05 37.50 4.51
2479 6314 1.144708 TCTCTCAATGGTTGCACCCAA 59.855 47.619 7.21 0.00 37.50 4.12
2480 6315 2.173519 CTCTCAATGGTTGCACCCAAT 58.826 47.619 7.21 0.00 37.50 3.16
2481 6316 3.010027 TCTCTCAATGGTTGCACCCAATA 59.990 43.478 7.21 0.00 37.50 1.90
2482 6317 3.088532 TCTCAATGGTTGCACCCAATAC 58.911 45.455 7.21 0.00 37.50 1.89
2483 6318 3.091545 CTCAATGGTTGCACCCAATACT 58.908 45.455 7.21 0.00 37.50 2.12
2484 6319 3.088532 TCAATGGTTGCACCCAATACTC 58.911 45.455 7.21 0.00 37.50 2.59
2485 6320 2.824936 CAATGGTTGCACCCAATACTCA 59.175 45.455 7.21 0.00 37.50 3.41
2486 6321 2.666272 TGGTTGCACCCAATACTCAA 57.334 45.000 0.00 0.00 37.50 3.02
2487 6322 2.950781 TGGTTGCACCCAATACTCAAA 58.049 42.857 0.00 0.00 37.50 2.69
2488 6323 3.300388 TGGTTGCACCCAATACTCAAAA 58.700 40.909 0.00 0.00 37.50 2.44
2489 6324 3.320541 TGGTTGCACCCAATACTCAAAAG 59.679 43.478 0.00 0.00 37.50 2.27
2490 6325 3.317150 GTTGCACCCAATACTCAAAAGC 58.683 45.455 0.00 0.00 32.75 3.51
2491 6326 2.875296 TGCACCCAATACTCAAAAGCT 58.125 42.857 0.00 0.00 0.00 3.74
2492 6327 2.819608 TGCACCCAATACTCAAAAGCTC 59.180 45.455 0.00 0.00 0.00 4.09
2493 6328 2.819608 GCACCCAATACTCAAAAGCTCA 59.180 45.455 0.00 0.00 0.00 4.26
2494 6329 3.366374 GCACCCAATACTCAAAAGCTCAC 60.366 47.826 0.00 0.00 0.00 3.51
2495 6330 4.074970 CACCCAATACTCAAAAGCTCACT 58.925 43.478 0.00 0.00 0.00 3.41
2496 6331 4.074970 ACCCAATACTCAAAAGCTCACTG 58.925 43.478 0.00 0.00 0.00 3.66
2497 6332 3.441572 CCCAATACTCAAAAGCTCACTGG 59.558 47.826 0.00 0.00 0.00 4.00
2498 6333 4.326826 CCAATACTCAAAAGCTCACTGGA 58.673 43.478 0.00 0.00 0.00 3.86
2499 6334 4.394300 CCAATACTCAAAAGCTCACTGGAG 59.606 45.833 0.00 0.00 44.33 3.86
2500 6335 4.899352 ATACTCAAAAGCTCACTGGAGT 57.101 40.909 10.14 10.14 43.37 3.85
2501 6336 3.118905 ACTCAAAAGCTCACTGGAGTC 57.881 47.619 0.00 0.00 43.37 3.36
2502 6337 2.224402 ACTCAAAAGCTCACTGGAGTCC 60.224 50.000 0.73 0.73 43.37 3.85
2503 6338 1.768275 TCAAAAGCTCACTGGAGTCCA 59.232 47.619 12.40 12.40 43.37 4.02
2504 6339 1.876156 CAAAAGCTCACTGGAGTCCAC 59.124 52.381 8.12 0.00 43.37 4.02
2505 6340 1.131638 AAAGCTCACTGGAGTCCACA 58.868 50.000 8.12 0.00 43.37 4.17
2506 6341 0.394565 AAGCTCACTGGAGTCCACAC 59.605 55.000 8.12 0.00 43.37 3.82
2507 6342 1.373497 GCTCACTGGAGTCCACACG 60.373 63.158 8.12 0.91 43.37 4.49
2508 6343 1.806461 GCTCACTGGAGTCCACACGA 61.806 60.000 8.12 4.03 43.37 4.35
2509 6344 0.242286 CTCACTGGAGTCCACACGAG 59.758 60.000 8.12 10.28 36.36 4.18
2510 6345 0.467474 TCACTGGAGTCCACACGAGT 60.467 55.000 8.12 0.81 0.00 4.18
2511 6346 0.319040 CACTGGAGTCCACACGAGTG 60.319 60.000 8.12 10.88 45.47 3.51
2523 6358 3.299340 ACACGAGTGAGTAATGACCAC 57.701 47.619 10.50 0.00 0.00 4.16
2524 6359 2.626266 ACACGAGTGAGTAATGACCACA 59.374 45.455 10.50 0.00 32.33 4.17
2525 6360 3.258372 ACACGAGTGAGTAATGACCACAT 59.742 43.478 10.50 0.00 38.50 3.21
2526 6361 4.461431 ACACGAGTGAGTAATGACCACATA 59.539 41.667 10.50 0.00 35.50 2.29
2527 6362 5.047590 ACACGAGTGAGTAATGACCACATAA 60.048 40.000 10.50 0.00 35.50 1.90
2528 6363 5.516696 CACGAGTGAGTAATGACCACATAAG 59.483 44.000 0.00 0.00 35.50 1.73
2529 6364 5.043903 CGAGTGAGTAATGACCACATAAGG 58.956 45.833 0.00 0.00 35.50 2.69
2530 6365 5.163550 CGAGTGAGTAATGACCACATAAGGA 60.164 44.000 0.00 0.00 35.50 3.36
2531 6366 6.461648 CGAGTGAGTAATGACCACATAAGGAT 60.462 42.308 0.00 0.00 35.50 3.24
2532 6367 6.821388 AGTGAGTAATGACCACATAAGGATC 58.179 40.000 0.00 0.00 35.50 3.36
2533 6368 5.692204 GTGAGTAATGACCACATAAGGATCG 59.308 44.000 0.00 0.00 35.50 3.69
2534 6369 5.596772 TGAGTAATGACCACATAAGGATCGA 59.403 40.000 0.00 0.00 35.50 3.59
2535 6370 5.844004 AGTAATGACCACATAAGGATCGAC 58.156 41.667 0.00 0.00 35.50 4.20
2536 6371 2.863401 TGACCACATAAGGATCGACG 57.137 50.000 0.00 0.00 0.00 5.12
2537 6372 1.202371 TGACCACATAAGGATCGACGC 60.202 52.381 0.00 0.00 0.00 5.19
2538 6373 1.067212 GACCACATAAGGATCGACGCT 59.933 52.381 0.00 0.00 0.00 5.07
2539 6374 1.202417 ACCACATAAGGATCGACGCTG 60.202 52.381 0.00 0.00 0.00 5.18
2540 6375 1.202417 CCACATAAGGATCGACGCTGT 60.202 52.381 0.00 0.00 0.00 4.40
2541 6376 2.034179 CCACATAAGGATCGACGCTGTA 59.966 50.000 0.00 0.00 0.00 2.74
2542 6377 3.300857 CACATAAGGATCGACGCTGTAG 58.699 50.000 0.00 0.00 0.00 2.74
2543 6378 2.287668 ACATAAGGATCGACGCTGTAGC 60.288 50.000 0.00 0.00 37.78 3.58
2544 6379 1.676746 TAAGGATCGACGCTGTAGCT 58.323 50.000 2.04 0.00 39.32 3.32
2545 6380 0.382515 AAGGATCGACGCTGTAGCTC 59.617 55.000 0.00 0.00 39.32 4.09
2546 6381 0.464735 AGGATCGACGCTGTAGCTCT 60.465 55.000 0.00 0.00 39.32 4.09
2547 6382 1.202663 AGGATCGACGCTGTAGCTCTA 60.203 52.381 0.00 0.00 39.32 2.43
2548 6383 1.807742 GGATCGACGCTGTAGCTCTAT 59.192 52.381 0.00 0.00 39.32 1.98
2549 6384 3.001414 GGATCGACGCTGTAGCTCTATA 58.999 50.000 0.00 0.00 39.32 1.31
2550 6385 3.062909 GGATCGACGCTGTAGCTCTATAG 59.937 52.174 0.00 0.00 39.32 1.31
2551 6386 3.382048 TCGACGCTGTAGCTCTATAGA 57.618 47.619 1.69 1.69 39.32 1.98
2552 6387 3.927854 TCGACGCTGTAGCTCTATAGAT 58.072 45.455 2.11 0.00 39.32 1.98
2553 6388 4.316645 TCGACGCTGTAGCTCTATAGATT 58.683 43.478 2.11 0.00 39.32 2.40
2554 6389 5.476614 TCGACGCTGTAGCTCTATAGATTA 58.523 41.667 2.11 0.00 39.32 1.75
2555 6390 5.348179 TCGACGCTGTAGCTCTATAGATTAC 59.652 44.000 2.11 9.67 39.32 1.89
2556 6391 5.446206 CGACGCTGTAGCTCTATAGATTACC 60.446 48.000 16.17 6.49 39.32 2.85
2557 6392 5.562635 ACGCTGTAGCTCTATAGATTACCT 58.437 41.667 16.17 8.75 39.32 3.08
2558 6393 6.709281 ACGCTGTAGCTCTATAGATTACCTA 58.291 40.000 16.17 8.04 39.32 3.08
2559 6394 7.166851 ACGCTGTAGCTCTATAGATTACCTAA 58.833 38.462 16.17 3.99 39.32 2.69
2560 6395 7.664731 ACGCTGTAGCTCTATAGATTACCTAAA 59.335 37.037 16.17 6.12 39.32 1.85
2561 6396 8.512956 CGCTGTAGCTCTATAGATTACCTAAAA 58.487 37.037 16.17 3.51 39.32 1.52
2601 6436 1.555058 GGAGTCCTGGACTAAGGGGTT 60.555 57.143 28.41 4.94 43.53 4.11
2698 6533 1.195115 CCGGATTGGACTCTCCTTGA 58.805 55.000 0.00 0.00 42.00 3.02
2727 6562 1.468520 GCAAGCTTGGCGATCAACTAA 59.531 47.619 27.10 0.00 0.00 2.24
2756 6591 6.392625 TTCCTTCCTATGTAATCGACTCTG 57.607 41.667 0.00 0.00 0.00 3.35
2764 6599 5.916661 ATGTAATCGACTCTGTGTAACCT 57.083 39.130 0.00 0.00 34.36 3.50
2878 6714 9.810949 GGTTTAGCCATTACGATCTCGTGGTAT 62.811 44.444 15.08 3.76 44.51 2.73
2900 6736 9.035607 GGTATATCAACTCTTGTAACACTCATG 57.964 37.037 0.00 0.00 0.00 3.07
2917 6753 6.036844 ACACTCATGTTCATCAAGATCAATCG 59.963 38.462 0.00 0.00 34.46 3.34
3010 6846 0.892755 ACCATCGACCTTAGACGCAA 59.107 50.000 0.00 0.00 0.00 4.85
3024 6860 2.434774 GCAAAGTTCGGGACCCCT 59.565 61.111 4.46 0.00 0.00 4.79
3038 6874 1.152610 CCCCTTACCCGAGATCCGA 60.153 63.158 5.32 0.00 41.76 4.55
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 3.564027 GAGCCGGATTTGCGTCGG 61.564 66.667 5.05 0.00 45.84 4.79
14 15 1.906994 TTTGAGCCGGATTTGCGTCG 61.907 55.000 5.05 0.00 0.00 5.12
15 16 0.239879 TTTTGAGCCGGATTTGCGTC 59.760 50.000 5.05 0.00 0.00 5.19
16 17 0.671251 TTTTTGAGCCGGATTTGCGT 59.329 45.000 5.05 0.00 0.00 5.24
17 18 1.655099 CATTTTTGAGCCGGATTTGCG 59.345 47.619 5.05 0.00 0.00 4.85
18 19 2.001872 CCATTTTTGAGCCGGATTTGC 58.998 47.619 5.05 0.00 0.00 3.68
19 20 2.028203 ACCCATTTTTGAGCCGGATTTG 60.028 45.455 5.05 0.00 0.00 2.32
20 21 2.233676 GACCCATTTTTGAGCCGGATTT 59.766 45.455 5.05 0.00 0.00 2.17
21 22 1.824852 GACCCATTTTTGAGCCGGATT 59.175 47.619 5.05 0.00 0.00 3.01
22 23 1.474330 GACCCATTTTTGAGCCGGAT 58.526 50.000 5.05 0.00 0.00 4.18
23 24 0.958382 CGACCCATTTTTGAGCCGGA 60.958 55.000 5.05 0.00 0.00 5.14
24 25 1.506262 CGACCCATTTTTGAGCCGG 59.494 57.895 0.00 0.00 0.00 6.13
25 26 1.154035 GCGACCCATTTTTGAGCCG 60.154 57.895 0.00 0.00 0.00 5.52
26 27 1.215382 GGCGACCCATTTTTGAGCC 59.785 57.895 0.00 0.00 36.08 4.70
27 28 4.889427 GGCGACCCATTTTTGAGC 57.111 55.556 0.00 0.00 0.00 4.26
45 46 4.130281 GTCCGCTTTTCGTCCGCG 62.130 66.667 0.00 0.00 45.86 6.46
46 47 4.130281 CGTCCGCTTTTCGTCCGC 62.130 66.667 0.00 0.00 36.19 5.54
47 48 4.130281 GCGTCCGCTTTTCGTCCG 62.130 66.667 4.10 0.00 38.26 4.79
48 49 4.130281 CGCGTCCGCTTTTCGTCC 62.130 66.667 10.21 0.00 39.32 4.79
70 71 3.273834 AACGTGCCGACCCAAACG 61.274 61.111 0.00 0.00 41.64 3.60
71 72 2.113131 CTCAACGTGCCGACCCAAAC 62.113 60.000 0.00 0.00 0.00 2.93
72 73 1.890041 CTCAACGTGCCGACCCAAA 60.890 57.895 0.00 0.00 0.00 3.28
73 74 2.280524 CTCAACGTGCCGACCCAA 60.281 61.111 0.00 0.00 0.00 4.12
74 75 4.980805 GCTCAACGTGCCGACCCA 62.981 66.667 0.00 0.00 0.00 4.51
80 81 1.782028 AAAAGTCGGCTCAACGTGCC 61.782 55.000 5.33 5.33 46.42 5.01
81 82 0.384353 GAAAAGTCGGCTCAACGTGC 60.384 55.000 0.00 0.00 34.94 5.34
82 83 1.070577 CAGAAAAGTCGGCTCAACGTG 60.071 52.381 0.00 0.00 34.94 4.49
83 84 1.217882 CAGAAAAGTCGGCTCAACGT 58.782 50.000 0.00 0.00 34.94 3.99
84 85 1.217882 ACAGAAAAGTCGGCTCAACG 58.782 50.000 0.00 0.00 0.00 4.10
85 86 2.348591 CGAACAGAAAAGTCGGCTCAAC 60.349 50.000 0.00 0.00 0.00 3.18
86 87 1.864711 CGAACAGAAAAGTCGGCTCAA 59.135 47.619 0.00 0.00 0.00 3.02
87 88 1.497991 CGAACAGAAAAGTCGGCTCA 58.502 50.000 0.00 0.00 0.00 4.26
88 89 0.164002 GCGAACAGAAAAGTCGGCTC 59.836 55.000 0.00 0.00 0.00 4.70
89 90 1.557443 CGCGAACAGAAAAGTCGGCT 61.557 55.000 0.00 0.00 0.00 5.52
90 91 1.154654 CGCGAACAGAAAAGTCGGC 60.155 57.895 0.00 0.00 0.00 5.54
91 92 1.154654 GCGCGAACAGAAAAGTCGG 60.155 57.895 12.10 0.00 0.00 4.79
92 93 1.154654 GGCGCGAACAGAAAAGTCG 60.155 57.895 12.10 0.00 0.00 4.18
93 94 1.154654 CGGCGCGAACAGAAAAGTC 60.155 57.895 12.10 0.00 0.00 3.01
94 95 1.593209 TCGGCGCGAACAGAAAAGT 60.593 52.632 12.10 0.00 31.06 2.66
95 96 1.154654 GTCGGCGCGAACAGAAAAG 60.155 57.895 12.10 0.00 37.72 2.27
96 97 2.600475 GGTCGGCGCGAACAGAAAA 61.600 57.895 12.10 0.00 43.67 2.29
97 98 3.039588 GGTCGGCGCGAACAGAAA 61.040 61.111 12.10 0.00 43.67 2.52
101 102 4.912485 TTTGGGTCGGCGCGAACA 62.912 61.111 12.10 10.39 46.28 3.18
102 103 4.379143 GTTTGGGTCGGCGCGAAC 62.379 66.667 19.79 19.79 43.47 3.95
126 127 3.192922 GACCCATTTCGTCCGCCG 61.193 66.667 0.00 0.00 38.13 6.46
127 128 2.822701 GGACCCATTTCGTCCGCC 60.823 66.667 0.00 0.00 40.46 6.13
131 132 2.017049 CTCCAATGGACCCATTTCGTC 58.983 52.381 11.34 0.00 43.32 4.20
132 133 1.354368 ACTCCAATGGACCCATTTCGT 59.646 47.619 11.34 6.55 43.32 3.85
133 134 2.128771 ACTCCAATGGACCCATTTCG 57.871 50.000 11.34 5.60 43.32 3.46
134 135 2.094026 GCAACTCCAATGGACCCATTTC 60.094 50.000 11.34 0.00 43.32 2.17
135 136 1.901833 GCAACTCCAATGGACCCATTT 59.098 47.619 11.34 0.00 43.32 2.32
136 137 1.077663 AGCAACTCCAATGGACCCATT 59.922 47.619 8.40 8.40 46.35 3.16
137 138 0.706433 AGCAACTCCAATGGACCCAT 59.294 50.000 0.00 0.00 38.46 4.00
138 139 0.038166 GAGCAACTCCAATGGACCCA 59.962 55.000 0.00 0.00 0.00 4.51
139 140 0.329596 AGAGCAACTCCAATGGACCC 59.670 55.000 0.00 0.00 0.00 4.46
140 141 3.350219 TTAGAGCAACTCCAATGGACC 57.650 47.619 0.00 0.00 0.00 4.46
141 142 4.517285 TGATTAGAGCAACTCCAATGGAC 58.483 43.478 0.00 0.00 0.00 4.02
142 143 4.842531 TGATTAGAGCAACTCCAATGGA 57.157 40.909 0.48 0.48 0.00 3.41
143 144 7.572523 TTAATGATTAGAGCAACTCCAATGG 57.427 36.000 0.00 0.00 0.00 3.16
144 145 8.133627 CCTTTAATGATTAGAGCAACTCCAATG 58.866 37.037 0.00 0.00 0.00 2.82
145 146 7.836183 ACCTTTAATGATTAGAGCAACTCCAAT 59.164 33.333 0.00 0.00 0.00 3.16
146 147 7.175104 ACCTTTAATGATTAGAGCAACTCCAA 58.825 34.615 0.00 0.00 0.00 3.53
147 148 6.721318 ACCTTTAATGATTAGAGCAACTCCA 58.279 36.000 0.00 0.00 0.00 3.86
148 149 7.631717 AACCTTTAATGATTAGAGCAACTCC 57.368 36.000 0.00 0.00 0.00 3.85
177 178 3.753294 AGAGACGGACAAAATCACTGT 57.247 42.857 0.00 0.00 0.00 3.55
203 204 3.282157 CCTGAATGGCGCGATGGG 61.282 66.667 12.10 5.35 0.00 4.00
206 207 1.598962 CATCCCTGAATGGCGCGAT 60.599 57.895 12.10 0.00 0.00 4.58
274 275 1.475280 TCCTCCATGTACTACGTGTGC 59.525 52.381 0.00 0.00 33.37 4.57
300 734 3.074281 CAAACCCTAGCCCCGACA 58.926 61.111 0.00 0.00 0.00 4.35
330 764 1.448540 CCCGTGTCATCTCTGTGGC 60.449 63.158 0.00 0.00 0.00 5.01
332 766 0.459237 GCTCCCGTGTCATCTCTGTG 60.459 60.000 0.00 0.00 0.00 3.66
334 768 0.179116 CAGCTCCCGTGTCATCTCTG 60.179 60.000 0.00 0.00 0.00 3.35
350 2167 0.752658 AAGAAAAGGCACAACCCAGC 59.247 50.000 0.00 0.00 40.58 4.85
357 2174 3.064820 GTCGTCAAGAAAGAAAAGGCACA 59.935 43.478 0.00 0.00 0.00 4.57
375 2192 5.240623 TGATTGCACTTGGAAAATTAGTCGT 59.759 36.000 0.00 0.00 0.00 4.34
380 2197 6.009589 TCTCCTGATTGCACTTGGAAAATTA 58.990 36.000 0.00 0.00 0.00 1.40
391 2209 2.751806 CCTTCCTTTCTCCTGATTGCAC 59.248 50.000 0.00 0.00 0.00 4.57
424 2242 9.918630 AACTTAGCATATTGCCATATTCAATTC 57.081 29.630 5.56 0.00 46.52 2.17
509 2327 4.024556 TGCTGCTTTTCTCTTTCTCTTTCG 60.025 41.667 0.00 0.00 0.00 3.46
573 2399 6.762661 GTGGTAGCCATTGATAATGCAAAATT 59.237 34.615 0.00 0.00 37.57 1.82
598 2424 5.607119 AACTAATACCAACTTCGCAACTG 57.393 39.130 0.00 0.00 0.00 3.16
605 2431 9.959749 TTGATGTCAAAAACTAATACCAACTTC 57.040 29.630 0.00 0.00 32.11 3.01
618 2444 9.474920 TCATTTATCCTTGTTGATGTCAAAAAC 57.525 29.630 0.00 0.00 37.63 2.43
629 2455 7.120285 TGCTCTCTTCTTCATTTATCCTTGTTG 59.880 37.037 0.00 0.00 0.00 3.33
632 2458 7.804843 ATGCTCTCTTCTTCATTTATCCTTG 57.195 36.000 0.00 0.00 0.00 3.61
661 2487 1.743958 ACTAGACTCGGTCGTCCATTG 59.256 52.381 0.00 0.00 37.67 2.82
672 2498 3.109044 TGGATCGACCTACTAGACTCG 57.891 52.381 0.00 0.00 39.86 4.18
714 2546 1.884235 ACTGAACAGAGCCGAAAAGG 58.116 50.000 8.87 0.00 44.97 3.11
741 2573 1.010125 CACACGGTGAAACGCCAAG 60.010 57.895 16.29 0.00 38.12 3.61
742 2574 3.102985 CACACGGTGAAACGCCAA 58.897 55.556 16.29 0.00 38.12 4.52
828 4346 1.280746 CAACAGCAACCGCAGTCAG 59.719 57.895 0.00 0.00 36.78 3.51
831 4349 2.516930 AGCAACAGCAACCGCAGT 60.517 55.556 0.00 0.00 39.97 4.40
881 4405 1.878102 CGTGGAAGGTGAAGAAGTGGG 60.878 57.143 0.00 0.00 0.00 4.61
884 4408 1.270358 GCTCGTGGAAGGTGAAGAAGT 60.270 52.381 0.00 0.00 0.00 3.01
1142 4885 0.455410 CTTCCCTCTCTCTGTGCTCG 59.545 60.000 0.00 0.00 0.00 5.03
1143 4886 0.175531 GCTTCCCTCTCTCTGTGCTC 59.824 60.000 0.00 0.00 0.00 4.26
1146 4889 0.108233 GCTGCTTCCCTCTCTCTGTG 60.108 60.000 0.00 0.00 0.00 3.66
1253 5031 0.029300 CAGAGAGCAGAGCGAGCTAC 59.971 60.000 0.00 0.00 43.58 3.58
1286 5064 0.797249 GTGGATCGACGAGTTGACCG 60.797 60.000 3.01 0.00 0.00 4.79
1352 5130 3.114606 TCTTGGTTCAGGCCATCAGATA 58.885 45.455 5.01 0.00 38.48 1.98
1361 5139 1.534729 ACCGAAATCTTGGTTCAGGC 58.465 50.000 0.00 0.00 33.81 4.85
1369 5147 0.811281 GGGAGGCAACCGAAATCTTG 59.189 55.000 0.00 0.00 37.17 3.02
1394 5172 1.955663 GCAAAACAGCCGGCAAAGG 60.956 57.895 31.54 17.30 0.00 3.11
1396 5174 0.747255 TTAGCAAAACAGCCGGCAAA 59.253 45.000 31.54 5.21 34.23 3.68
1397 5175 0.747255 TTTAGCAAAACAGCCGGCAA 59.253 45.000 31.54 7.70 34.23 4.52
1399 5177 0.313987 ACTTTAGCAAAACAGCCGGC 59.686 50.000 21.89 21.89 34.23 6.13
1400 5178 3.907894 TTACTTTAGCAAAACAGCCGG 57.092 42.857 0.00 0.00 34.23 6.13
1401 5179 5.569059 CAGATTTACTTTAGCAAAACAGCCG 59.431 40.000 0.00 0.00 34.23 5.52
1402 5180 5.863935 CCAGATTTACTTTAGCAAAACAGCC 59.136 40.000 0.00 0.00 34.23 4.85
1403 5181 6.363357 CACCAGATTTACTTTAGCAAAACAGC 59.637 38.462 0.00 0.00 0.00 4.40
1406 5197 6.447162 AGCACCAGATTTACTTTAGCAAAAC 58.553 36.000 0.00 0.00 0.00 2.43
1417 5208 3.563808 TCACACACAAGCACCAGATTTAC 59.436 43.478 0.00 0.00 0.00 2.01
1420 5211 1.949525 GTCACACACAAGCACCAGATT 59.050 47.619 0.00 0.00 0.00 2.40
1440 5231 3.304794 GCCGATGAAGTAGCCTACAGTAG 60.305 52.174 4.41 0.00 0.00 2.57
1470 5265 1.000060 CCTTGGTCTCGTCGGTGTTTA 60.000 52.381 0.00 0.00 0.00 2.01
1471 5266 0.249741 CCTTGGTCTCGTCGGTGTTT 60.250 55.000 0.00 0.00 0.00 2.83
1484 5279 0.250770 GGCGGTTCTTTCTCCTTGGT 60.251 55.000 0.00 0.00 0.00 3.67
1543 5338 2.824041 GCGCACATACCACCAGGG 60.824 66.667 0.30 0.00 44.81 4.45
1698 5518 2.228822 CGTACAATTTGGCCAAGAAGCT 59.771 45.455 19.48 4.24 0.00 3.74
1937 5770 4.630940 CAGAGCTTCCAAAGATGAAGAGAC 59.369 45.833 4.30 0.00 41.38 3.36
2041 5874 1.452110 TTCACATGGACGGATTGCAG 58.548 50.000 0.00 0.00 0.00 4.41
2045 5878 5.720371 TTTTCATTTCACATGGACGGATT 57.280 34.783 0.00 0.00 0.00 3.01
2091 5924 5.344066 CAGTCCACATCAGTACACAGTATC 58.656 45.833 0.00 0.00 0.00 2.24
2134 5969 5.349809 TCGATATATGTTTACACGCCAACA 58.650 37.500 0.00 0.00 37.31 3.33
2226 6061 4.080243 GGGGTTTTCCTCCTTTTCCAAAAA 60.080 41.667 0.00 0.00 40.46 1.94
2227 6062 3.456644 GGGGTTTTCCTCCTTTTCCAAAA 59.543 43.478 0.00 0.00 40.46 2.44
2228 6063 3.042682 GGGGTTTTCCTCCTTTTCCAAA 58.957 45.455 0.00 0.00 40.46 3.28
2229 6064 2.022918 TGGGGTTTTCCTCCTTTTCCAA 60.023 45.455 0.00 0.00 40.45 3.53
2230 6065 1.576272 TGGGGTTTTCCTCCTTTTCCA 59.424 47.619 0.00 0.00 40.45 3.53
2231 6066 2.248248 CTGGGGTTTTCCTCCTTTTCC 58.752 52.381 0.00 0.00 40.45 3.13
2232 6067 1.618837 GCTGGGGTTTTCCTCCTTTTC 59.381 52.381 0.00 0.00 40.45 2.29
2233 6068 1.717032 GCTGGGGTTTTCCTCCTTTT 58.283 50.000 0.00 0.00 40.45 2.27
2234 6069 0.178932 GGCTGGGGTTTTCCTCCTTT 60.179 55.000 0.00 0.00 40.45 3.11
2235 6070 1.074296 AGGCTGGGGTTTTCCTCCTT 61.074 55.000 0.00 0.00 40.45 3.36
2236 6071 1.466186 AGGCTGGGGTTTTCCTCCT 60.466 57.895 0.00 0.00 40.45 3.69
2237 6072 1.000771 GAGGCTGGGGTTTTCCTCC 60.001 63.158 0.00 0.00 40.45 4.30
2238 6073 0.322906 CAGAGGCTGGGGTTTTCCTC 60.323 60.000 0.00 0.00 44.09 3.71
2239 6074 1.770324 CAGAGGCTGGGGTTTTCCT 59.230 57.895 0.00 0.00 40.46 3.36
2240 6075 1.979155 GCAGAGGCTGGGGTTTTCC 60.979 63.158 0.00 0.00 36.96 3.13
2241 6076 0.613012 ATGCAGAGGCTGGGGTTTTC 60.613 55.000 0.00 0.00 41.91 2.29
2242 6077 0.613012 GATGCAGAGGCTGGGGTTTT 60.613 55.000 0.00 0.00 41.91 2.43
2243 6078 1.000396 GATGCAGAGGCTGGGGTTT 60.000 57.895 0.00 0.00 41.91 3.27
2244 6079 1.792757 TTGATGCAGAGGCTGGGGTT 61.793 55.000 0.00 0.00 41.91 4.11
2245 6080 1.578215 ATTGATGCAGAGGCTGGGGT 61.578 55.000 0.00 0.00 41.91 4.95
2246 6081 0.822532 GATTGATGCAGAGGCTGGGG 60.823 60.000 0.00 0.00 41.91 4.96
2247 6082 0.822532 GGATTGATGCAGAGGCTGGG 60.823 60.000 0.00 0.00 41.91 4.45
2248 6083 0.106868 TGGATTGATGCAGAGGCTGG 60.107 55.000 0.00 0.00 41.91 4.85
2249 6084 1.609072 CATGGATTGATGCAGAGGCTG 59.391 52.381 0.00 0.00 41.91 4.85
2250 6085 1.982660 CATGGATTGATGCAGAGGCT 58.017 50.000 0.00 0.00 41.91 4.58
2251 6086 0.314302 GCATGGATTGATGCAGAGGC 59.686 55.000 0.00 0.00 46.77 4.70
2258 6093 2.360801 TGACTGCATGCATGGATTGATG 59.639 45.455 27.34 14.92 0.00 3.07
2259 6094 2.661718 TGACTGCATGCATGGATTGAT 58.338 42.857 27.34 10.99 0.00 2.57
2260 6095 2.131776 TGACTGCATGCATGGATTGA 57.868 45.000 27.34 11.26 0.00 2.57
2261 6096 2.623416 AGATGACTGCATGCATGGATTG 59.377 45.455 27.34 16.34 34.11 2.67
2262 6097 2.945456 AGATGACTGCATGCATGGATT 58.055 42.857 27.34 19.47 34.11 3.01
2263 6098 2.658807 AGATGACTGCATGCATGGAT 57.341 45.000 27.34 12.76 34.11 3.41
2264 6099 2.430248 AAGATGACTGCATGCATGGA 57.570 45.000 27.34 23.99 34.11 3.41
2265 6100 4.848562 AATAAGATGACTGCATGCATGG 57.151 40.909 27.34 13.40 34.11 3.66
2266 6101 6.731164 TGTTAATAAGATGACTGCATGCATG 58.269 36.000 22.97 22.70 34.11 4.06
2267 6102 6.947644 TGTTAATAAGATGACTGCATGCAT 57.052 33.333 22.97 11.62 34.11 3.96
2268 6103 6.756299 TTGTTAATAAGATGACTGCATGCA 57.244 33.333 21.29 21.29 34.11 3.96
2269 6104 9.734620 TTTATTGTTAATAAGATGACTGCATGC 57.265 29.630 11.82 11.82 35.00 4.06
2285 6120 9.016438 CCTAAGGCTTTGGTACTTTATTGTTAA 57.984 33.333 18.08 0.00 0.00 2.01
2286 6121 7.612633 CCCTAAGGCTTTGGTACTTTATTGTTA 59.387 37.037 23.09 0.00 0.00 2.41
2287 6122 6.436218 CCCTAAGGCTTTGGTACTTTATTGTT 59.564 38.462 23.09 0.00 0.00 2.83
2288 6123 5.949952 CCCTAAGGCTTTGGTACTTTATTGT 59.050 40.000 23.09 0.00 0.00 2.71
2289 6124 5.949952 ACCCTAAGGCTTTGGTACTTTATTG 59.050 40.000 23.09 9.41 36.11 1.90
2290 6125 6.148735 ACCCTAAGGCTTTGGTACTTTATT 57.851 37.500 23.09 0.00 36.11 1.40
2291 6126 5.252164 TGACCCTAAGGCTTTGGTACTTTAT 59.748 40.000 23.09 3.20 36.11 1.40
2292 6127 4.598373 TGACCCTAAGGCTTTGGTACTTTA 59.402 41.667 23.09 4.22 36.11 1.85
2293 6128 3.396611 TGACCCTAAGGCTTTGGTACTTT 59.603 43.478 23.09 5.18 36.11 2.66
2294 6129 2.983898 TGACCCTAAGGCTTTGGTACTT 59.016 45.455 23.09 7.37 36.11 2.24
2295 6130 2.305052 GTGACCCTAAGGCTTTGGTACT 59.695 50.000 23.09 7.97 36.11 2.73
2296 6131 2.305052 AGTGACCCTAAGGCTTTGGTAC 59.695 50.000 23.09 18.24 36.11 3.34
2297 6132 2.627933 AGTGACCCTAAGGCTTTGGTA 58.372 47.619 23.09 9.13 36.11 3.25
2298 6133 1.446016 AGTGACCCTAAGGCTTTGGT 58.554 50.000 23.09 20.47 36.11 3.67
2299 6134 2.092914 CCTAGTGACCCTAAGGCTTTGG 60.093 54.545 19.18 19.18 36.11 3.28
2300 6135 2.092914 CCCTAGTGACCCTAAGGCTTTG 60.093 54.545 4.45 2.74 36.11 2.77
2301 6136 2.197465 CCCTAGTGACCCTAAGGCTTT 58.803 52.381 4.45 0.00 36.11 3.51
2302 6137 1.880941 CCCTAGTGACCCTAAGGCTT 58.119 55.000 4.58 4.58 36.11 4.35
2303 6138 0.691413 GCCCTAGTGACCCTAAGGCT 60.691 60.000 0.00 0.00 46.03 4.58
2304 6139 1.830836 GCCCTAGTGACCCTAAGGC 59.169 63.158 0.00 0.00 44.10 4.35
2305 6140 0.031010 AGGCCCTAGTGACCCTAAGG 60.031 60.000 0.00 0.00 40.04 2.69
2306 6141 2.769602 TAGGCCCTAGTGACCCTAAG 57.230 55.000 0.00 0.00 0.00 2.18
2307 6142 4.838105 TTATAGGCCCTAGTGACCCTAA 57.162 45.455 0.00 0.00 33.94 2.69
2308 6143 4.358918 TGATTATAGGCCCTAGTGACCCTA 59.641 45.833 0.00 0.00 34.68 3.53
2309 6144 3.144125 TGATTATAGGCCCTAGTGACCCT 59.856 47.826 0.00 0.00 0.00 4.34
2310 6145 3.517612 TGATTATAGGCCCTAGTGACCC 58.482 50.000 0.00 0.00 0.00 4.46
2311 6146 5.958987 ACTATGATTATAGGCCCTAGTGACC 59.041 44.000 0.00 0.00 40.51 4.02
2312 6147 6.628398 GCACTATGATTATAGGCCCTAGTGAC 60.628 46.154 9.65 0.00 40.51 3.67
2313 6148 5.422331 GCACTATGATTATAGGCCCTAGTGA 59.578 44.000 9.65 0.00 40.51 3.41
2314 6149 5.187772 TGCACTATGATTATAGGCCCTAGTG 59.812 44.000 0.00 0.00 40.51 2.74
2315 6150 5.342017 TGCACTATGATTATAGGCCCTAGT 58.658 41.667 0.00 0.00 40.51 2.57
2316 6151 5.939764 TGCACTATGATTATAGGCCCTAG 57.060 43.478 0.00 0.00 40.51 3.02
2317 6152 6.696042 TTTGCACTATGATTATAGGCCCTA 57.304 37.500 0.00 0.00 40.51 3.53
2318 6153 5.582950 TTTGCACTATGATTATAGGCCCT 57.417 39.130 0.00 0.00 40.51 5.19
2319 6154 5.334879 CGTTTTGCACTATGATTATAGGCCC 60.335 44.000 0.00 0.00 40.51 5.80
2320 6155 5.468746 TCGTTTTGCACTATGATTATAGGCC 59.531 40.000 9.16 0.00 40.51 5.19
2321 6156 6.539649 TCGTTTTGCACTATGATTATAGGC 57.460 37.500 9.16 9.39 40.51 3.93
2327 6162 9.469807 TGTTTTATTTCGTTTTGCACTATGATT 57.530 25.926 0.00 0.00 0.00 2.57
2328 6163 9.469807 TTGTTTTATTTCGTTTTGCACTATGAT 57.530 25.926 0.00 0.00 0.00 2.45
2329 6164 8.858003 TTGTTTTATTTCGTTTTGCACTATGA 57.142 26.923 0.00 0.00 0.00 2.15
2330 6165 9.566624 CTTTGTTTTATTTCGTTTTGCACTATG 57.433 29.630 0.00 0.00 0.00 2.23
2331 6166 9.522804 TCTTTGTTTTATTTCGTTTTGCACTAT 57.477 25.926 0.00 0.00 0.00 2.12
2332 6167 8.912787 TCTTTGTTTTATTTCGTTTTGCACTA 57.087 26.923 0.00 0.00 0.00 2.74
2333 6168 7.820044 TCTTTGTTTTATTTCGTTTTGCACT 57.180 28.000 0.00 0.00 0.00 4.40
2334 6169 8.867248 TTTCTTTGTTTTATTTCGTTTTGCAC 57.133 26.923 0.00 0.00 0.00 4.57
2335 6170 8.926710 TCTTTCTTTGTTTTATTTCGTTTTGCA 58.073 25.926 0.00 0.00 0.00 4.08
2336 6171 9.914923 ATCTTTCTTTGTTTTATTTCGTTTTGC 57.085 25.926 0.00 0.00 0.00 3.68
2338 6173 9.914923 GCATCTTTCTTTGTTTTATTTCGTTTT 57.085 25.926 0.00 0.00 0.00 2.43
2339 6174 8.547894 GGCATCTTTCTTTGTTTTATTTCGTTT 58.452 29.630 0.00 0.00 0.00 3.60
2340 6175 7.708752 TGGCATCTTTCTTTGTTTTATTTCGTT 59.291 29.630 0.00 0.00 0.00 3.85
2341 6176 7.169140 GTGGCATCTTTCTTTGTTTTATTTCGT 59.831 33.333 0.00 0.00 0.00 3.85
2342 6177 7.168972 TGTGGCATCTTTCTTTGTTTTATTTCG 59.831 33.333 0.00 0.00 0.00 3.46
2343 6178 8.364129 TGTGGCATCTTTCTTTGTTTTATTTC 57.636 30.769 0.00 0.00 0.00 2.17
2344 6179 8.907222 ATGTGGCATCTTTCTTTGTTTTATTT 57.093 26.923 0.00 0.00 0.00 1.40
2345 6180 7.603784 GGATGTGGCATCTTTCTTTGTTTTATT 59.396 33.333 8.72 0.00 0.00 1.40
2346 6181 7.099120 GGATGTGGCATCTTTCTTTGTTTTAT 58.901 34.615 8.72 0.00 0.00 1.40
2347 6182 6.454795 GGATGTGGCATCTTTCTTTGTTTTA 58.545 36.000 8.72 0.00 0.00 1.52
2348 6183 5.299949 GGATGTGGCATCTTTCTTTGTTTT 58.700 37.500 8.72 0.00 0.00 2.43
2349 6184 4.559300 CGGATGTGGCATCTTTCTTTGTTT 60.559 41.667 8.72 0.00 0.00 2.83
2350 6185 3.057315 CGGATGTGGCATCTTTCTTTGTT 60.057 43.478 8.72 0.00 0.00 2.83
2351 6186 2.489329 CGGATGTGGCATCTTTCTTTGT 59.511 45.455 8.72 0.00 0.00 2.83
2352 6187 2.159338 CCGGATGTGGCATCTTTCTTTG 60.159 50.000 0.00 0.00 0.00 2.77
2353 6188 2.094675 CCGGATGTGGCATCTTTCTTT 58.905 47.619 0.00 0.00 0.00 2.52
2354 6189 1.755179 CCGGATGTGGCATCTTTCTT 58.245 50.000 0.00 0.00 0.00 2.52
2355 6190 3.483954 CCGGATGTGGCATCTTTCT 57.516 52.632 0.00 0.00 0.00 2.52
2364 6199 0.744414 ATCTGTTTCGCCGGATGTGG 60.744 55.000 5.05 0.00 0.00 4.17
2365 6200 0.652592 GATCTGTTTCGCCGGATGTG 59.347 55.000 5.05 0.00 30.54 3.21
2366 6201 0.249120 TGATCTGTTTCGCCGGATGT 59.751 50.000 5.05 0.00 30.54 3.06
2367 6202 0.933097 CTGATCTGTTTCGCCGGATG 59.067 55.000 5.05 0.00 30.54 3.51
2368 6203 0.179073 CCTGATCTGTTTCGCCGGAT 60.179 55.000 5.05 0.00 33.10 4.18
2369 6204 1.218047 CCTGATCTGTTTCGCCGGA 59.782 57.895 5.05 0.00 0.00 5.14
2370 6205 0.673644 AACCTGATCTGTTTCGCCGG 60.674 55.000 0.00 0.00 0.00 6.13
2371 6206 1.659098 GTAACCTGATCTGTTTCGCCG 59.341 52.381 6.53 0.00 0.00 6.46
2372 6207 1.659098 CGTAACCTGATCTGTTTCGCC 59.341 52.381 12.10 0.00 31.56 5.54
2373 6208 2.602878 TCGTAACCTGATCTGTTTCGC 58.397 47.619 16.74 5.72 36.73 4.70
2374 6209 3.000322 GCATCGTAACCTGATCTGTTTCG 60.000 47.826 15.96 15.96 37.69 3.46
2375 6210 3.309954 GGCATCGTAACCTGATCTGTTTC 59.690 47.826 6.53 2.09 0.00 2.78
2376 6211 3.055094 AGGCATCGTAACCTGATCTGTTT 60.055 43.478 6.53 0.00 34.07 2.83
2377 6212 2.501723 AGGCATCGTAACCTGATCTGTT 59.498 45.455 6.47 6.47 34.07 3.16
2378 6213 2.111384 AGGCATCGTAACCTGATCTGT 58.889 47.619 0.00 0.00 34.07 3.41
2379 6214 2.898729 AGGCATCGTAACCTGATCTG 57.101 50.000 0.00 0.00 34.07 2.90
2380 6215 5.047943 GTGTATAGGCATCGTAACCTGATCT 60.048 44.000 0.00 0.00 36.77 2.75
2381 6216 5.162075 GTGTATAGGCATCGTAACCTGATC 58.838 45.833 3.61 0.00 36.77 2.92
2382 6217 4.021368 GGTGTATAGGCATCGTAACCTGAT 60.021 45.833 3.61 0.00 36.77 2.90
2383 6218 3.319972 GGTGTATAGGCATCGTAACCTGA 59.680 47.826 3.61 0.00 36.77 3.86
2384 6219 3.321111 AGGTGTATAGGCATCGTAACCTG 59.679 47.826 0.00 0.00 36.77 4.00
2385 6220 3.573695 AGGTGTATAGGCATCGTAACCT 58.426 45.455 0.00 0.00 40.24 3.50
2386 6221 4.617762 GCTAGGTGTATAGGCATCGTAACC 60.618 50.000 0.00 0.00 0.00 2.85
2387 6222 4.483311 GCTAGGTGTATAGGCATCGTAAC 58.517 47.826 0.00 0.00 0.00 2.50
2388 6223 3.508793 GGCTAGGTGTATAGGCATCGTAA 59.491 47.826 2.76 0.00 45.23 3.18
2389 6224 3.087031 GGCTAGGTGTATAGGCATCGTA 58.913 50.000 2.76 0.00 45.23 3.43
2390 6225 1.893801 GGCTAGGTGTATAGGCATCGT 59.106 52.381 2.76 0.00 45.23 3.73
2391 6226 2.656560 GGCTAGGTGTATAGGCATCG 57.343 55.000 2.76 0.00 45.23 3.84
2395 6230 6.461788 GCTGATAATAGGCTAGGTGTATAGGC 60.462 46.154 0.00 0.00 46.02 3.93
2396 6231 6.607600 TGCTGATAATAGGCTAGGTGTATAGG 59.392 42.308 0.00 0.00 0.00 2.57
2397 6232 7.484975 GTGCTGATAATAGGCTAGGTGTATAG 58.515 42.308 0.00 0.00 0.00 1.31
2398 6233 6.095021 CGTGCTGATAATAGGCTAGGTGTATA 59.905 42.308 0.00 0.00 0.00 1.47
2399 6234 5.105716 CGTGCTGATAATAGGCTAGGTGTAT 60.106 44.000 0.00 0.00 0.00 2.29
2400 6235 4.217767 CGTGCTGATAATAGGCTAGGTGTA 59.782 45.833 0.00 0.00 0.00 2.90
2401 6236 3.005897 CGTGCTGATAATAGGCTAGGTGT 59.994 47.826 0.00 0.00 0.00 4.16
2402 6237 3.005897 ACGTGCTGATAATAGGCTAGGTG 59.994 47.826 0.00 0.00 0.00 4.00
2403 6238 3.231818 ACGTGCTGATAATAGGCTAGGT 58.768 45.455 0.00 0.00 0.00 3.08
2404 6239 3.255888 TGACGTGCTGATAATAGGCTAGG 59.744 47.826 0.00 0.00 0.00 3.02
2405 6240 4.505313 TGACGTGCTGATAATAGGCTAG 57.495 45.455 0.00 0.00 0.00 3.42
2406 6241 4.082190 GGATGACGTGCTGATAATAGGCTA 60.082 45.833 0.00 0.00 0.00 3.93
2407 6242 3.306364 GGATGACGTGCTGATAATAGGCT 60.306 47.826 0.00 0.00 0.00 4.58
2408 6243 2.996621 GGATGACGTGCTGATAATAGGC 59.003 50.000 0.00 0.00 0.00 3.93
2409 6244 4.257267 TGGATGACGTGCTGATAATAGG 57.743 45.455 0.00 0.00 0.00 2.57
2410 6245 6.400409 CGATTTGGATGACGTGCTGATAATAG 60.400 42.308 0.00 0.00 0.00 1.73
2411 6246 5.405269 CGATTTGGATGACGTGCTGATAATA 59.595 40.000 0.00 0.00 0.00 0.98
2412 6247 4.212004 CGATTTGGATGACGTGCTGATAAT 59.788 41.667 0.00 0.00 0.00 1.28
2413 6248 3.555547 CGATTTGGATGACGTGCTGATAA 59.444 43.478 0.00 0.00 0.00 1.75
2414 6249 3.123050 CGATTTGGATGACGTGCTGATA 58.877 45.455 0.00 0.00 0.00 2.15
2415 6250 1.935873 CGATTTGGATGACGTGCTGAT 59.064 47.619 0.00 0.00 0.00 2.90
2416 6251 1.358877 CGATTTGGATGACGTGCTGA 58.641 50.000 0.00 0.00 0.00 4.26
2417 6252 0.374758 CCGATTTGGATGACGTGCTG 59.625 55.000 0.00 0.00 42.00 4.41
2418 6253 1.369091 GCCGATTTGGATGACGTGCT 61.369 55.000 0.00 0.00 42.00 4.40
2419 6254 1.062525 GCCGATTTGGATGACGTGC 59.937 57.895 0.00 0.00 42.00 5.34
2420 6255 2.767536 AGCCGATTTGGATGACGTG 58.232 52.632 0.00 0.00 42.00 4.49
2426 6261 3.406764 GCTATCTTCAGCCGATTTGGAT 58.593 45.455 0.00 0.00 42.00 3.41
2427 6262 2.838736 GCTATCTTCAGCCGATTTGGA 58.161 47.619 0.00 0.00 42.00 3.53
2436 6271 1.889573 GGCACGGGCTATCTTCAGC 60.890 63.158 10.74 0.00 40.87 4.26
2437 6272 0.811616 GTGGCACGGGCTATCTTCAG 60.812 60.000 10.74 0.00 40.87 3.02
2438 6273 1.220749 GTGGCACGGGCTATCTTCA 59.779 57.895 10.74 0.00 40.87 3.02
2439 6274 1.523938 GGTGGCACGGGCTATCTTC 60.524 63.158 10.74 0.00 40.87 2.87
2440 6275 2.590092 GGTGGCACGGGCTATCTT 59.410 61.111 10.74 0.00 40.87 2.40
2441 6276 3.849951 CGGTGGCACGGGCTATCT 61.850 66.667 10.74 0.00 40.87 1.98
2442 6277 4.157120 ACGGTGGCACGGGCTATC 62.157 66.667 26.02 1.35 40.87 2.08
2443 6278 4.157120 GACGGTGGCACGGGCTAT 62.157 66.667 26.02 7.83 40.87 2.97
2447 6282 4.436998 GAGAGACGGTGGCACGGG 62.437 72.222 26.02 16.36 38.39 5.28
2448 6283 2.507110 ATTGAGAGACGGTGGCACGG 62.507 60.000 21.86 21.86 38.39 4.94
2449 6284 1.079819 ATTGAGAGACGGTGGCACG 60.080 57.895 12.17 9.61 40.31 5.34
2450 6285 1.021390 CCATTGAGAGACGGTGGCAC 61.021 60.000 9.70 9.70 0.00 5.01
2451 6286 1.296392 CCATTGAGAGACGGTGGCA 59.704 57.895 0.00 0.00 0.00 4.92
2452 6287 0.321653 AACCATTGAGAGACGGTGGC 60.322 55.000 0.00 0.00 33.24 5.01
2453 6288 1.442769 CAACCATTGAGAGACGGTGG 58.557 55.000 0.00 0.00 36.06 4.61
2454 6289 0.798776 GCAACCATTGAGAGACGGTG 59.201 55.000 0.00 0.00 0.00 4.94
2455 6290 0.396435 TGCAACCATTGAGAGACGGT 59.604 50.000 0.00 0.00 0.00 4.83
2456 6291 0.798776 GTGCAACCATTGAGAGACGG 59.201 55.000 0.00 0.00 0.00 4.79
2469 6304 3.005791 AGCTTTTGAGTATTGGGTGCAAC 59.994 43.478 0.00 0.00 0.00 4.17
2470 6305 3.230134 AGCTTTTGAGTATTGGGTGCAA 58.770 40.909 0.00 0.00 0.00 4.08
2471 6306 2.819608 GAGCTTTTGAGTATTGGGTGCA 59.180 45.455 0.00 0.00 0.00 4.57
2472 6307 2.819608 TGAGCTTTTGAGTATTGGGTGC 59.180 45.455 0.00 0.00 0.00 5.01
2473 6308 4.074970 AGTGAGCTTTTGAGTATTGGGTG 58.925 43.478 0.00 0.00 0.00 4.61
2474 6309 4.074970 CAGTGAGCTTTTGAGTATTGGGT 58.925 43.478 0.00 0.00 0.00 4.51
2475 6310 3.441572 CCAGTGAGCTTTTGAGTATTGGG 59.558 47.826 0.00 0.00 0.00 4.12
2476 6311 4.326826 TCCAGTGAGCTTTTGAGTATTGG 58.673 43.478 0.00 0.00 0.00 3.16
2477 6312 4.999950 ACTCCAGTGAGCTTTTGAGTATTG 59.000 41.667 0.00 0.00 42.74 1.90
2478 6313 5.234466 ACTCCAGTGAGCTTTTGAGTATT 57.766 39.130 0.00 0.00 42.74 1.89
2479 6314 4.323104 GGACTCCAGTGAGCTTTTGAGTAT 60.323 45.833 0.00 0.00 42.74 2.12
2480 6315 3.006967 GGACTCCAGTGAGCTTTTGAGTA 59.993 47.826 0.00 0.00 42.74 2.59
2481 6316 2.224402 GGACTCCAGTGAGCTTTTGAGT 60.224 50.000 0.00 0.00 42.74 3.41
2482 6317 2.224378 TGGACTCCAGTGAGCTTTTGAG 60.224 50.000 0.00 0.00 42.74 3.02
2483 6318 1.768275 TGGACTCCAGTGAGCTTTTGA 59.232 47.619 0.00 0.00 42.74 2.69
2484 6319 1.876156 GTGGACTCCAGTGAGCTTTTG 59.124 52.381 0.00 0.00 42.74 2.44
2485 6320 1.490490 TGTGGACTCCAGTGAGCTTTT 59.510 47.619 0.00 0.00 42.74 2.27
2486 6321 1.131638 TGTGGACTCCAGTGAGCTTT 58.868 50.000 0.00 0.00 42.74 3.51
2487 6322 0.394565 GTGTGGACTCCAGTGAGCTT 59.605 55.000 0.00 0.00 42.74 3.74
2488 6323 1.810606 CGTGTGGACTCCAGTGAGCT 61.811 60.000 0.00 0.00 42.74 4.09
2489 6324 1.373497 CGTGTGGACTCCAGTGAGC 60.373 63.158 0.00 0.00 42.74 4.26
2490 6325 0.242286 CTCGTGTGGACTCCAGTGAG 59.758 60.000 0.00 2.63 44.62 3.51
2491 6326 0.467474 ACTCGTGTGGACTCCAGTGA 60.467 55.000 0.00 0.00 32.34 3.41
2492 6327 0.319040 CACTCGTGTGGACTCCAGTG 60.319 60.000 9.74 0.00 40.33 3.66
2493 6328 0.467474 TCACTCGTGTGGACTCCAGT 60.467 55.000 16.88 0.00 43.94 4.00
2494 6329 0.242286 CTCACTCGTGTGGACTCCAG 59.758 60.000 16.88 2.95 43.94 3.86
2495 6330 0.467474 ACTCACTCGTGTGGACTCCA 60.467 55.000 16.88 0.00 43.94 3.86
2496 6331 1.531423 TACTCACTCGTGTGGACTCC 58.469 55.000 16.88 0.00 43.94 3.85
2497 6332 3.190744 TCATTACTCACTCGTGTGGACTC 59.809 47.826 16.88 0.00 43.94 3.36
2498 6333 3.057456 GTCATTACTCACTCGTGTGGACT 60.057 47.826 16.88 3.39 43.94 3.85
2499 6334 3.243336 GTCATTACTCACTCGTGTGGAC 58.757 50.000 16.88 11.15 43.94 4.02
2500 6335 2.230508 GGTCATTACTCACTCGTGTGGA 59.769 50.000 16.88 3.22 43.94 4.02
2501 6336 2.029380 TGGTCATTACTCACTCGTGTGG 60.029 50.000 16.88 10.38 43.94 4.17
2502 6337 2.987149 GTGGTCATTACTCACTCGTGTG 59.013 50.000 11.32 11.32 45.07 3.82
2503 6338 2.626266 TGTGGTCATTACTCACTCGTGT 59.374 45.455 0.00 0.00 31.73 4.49
2504 6339 3.297830 TGTGGTCATTACTCACTCGTG 57.702 47.619 0.00 0.00 31.73 4.35
2505 6340 5.394224 CCTTATGTGGTCATTACTCACTCGT 60.394 44.000 0.00 0.00 35.70 4.18
2506 6341 5.043903 CCTTATGTGGTCATTACTCACTCG 58.956 45.833 0.00 0.00 35.70 4.18
2507 6342 6.222038 TCCTTATGTGGTCATTACTCACTC 57.778 41.667 0.00 0.00 35.70 3.51
2508 6343 6.461648 CGATCCTTATGTGGTCATTACTCACT 60.462 42.308 0.00 0.00 35.70 3.41
2509 6344 5.692204 CGATCCTTATGTGGTCATTACTCAC 59.308 44.000 0.00 0.00 35.70 3.51
2510 6345 5.596772 TCGATCCTTATGTGGTCATTACTCA 59.403 40.000 0.00 0.00 35.70 3.41
2511 6346 5.921408 GTCGATCCTTATGTGGTCATTACTC 59.079 44.000 0.00 0.00 35.70 2.59
2512 6347 5.507482 CGTCGATCCTTATGTGGTCATTACT 60.507 44.000 0.00 0.00 35.70 2.24
2513 6348 4.680110 CGTCGATCCTTATGTGGTCATTAC 59.320 45.833 0.00 0.00 35.70 1.89
2514 6349 4.794981 GCGTCGATCCTTATGTGGTCATTA 60.795 45.833 0.00 0.00 35.70 1.90
2515 6350 3.717707 CGTCGATCCTTATGTGGTCATT 58.282 45.455 0.00 0.00 35.70 2.57
2516 6351 2.545952 GCGTCGATCCTTATGTGGTCAT 60.546 50.000 0.00 0.00 38.00 3.06
2517 6352 1.202371 GCGTCGATCCTTATGTGGTCA 60.202 52.381 0.00 0.00 0.00 4.02
2518 6353 1.067212 AGCGTCGATCCTTATGTGGTC 59.933 52.381 0.00 0.00 0.00 4.02
2519 6354 1.112113 AGCGTCGATCCTTATGTGGT 58.888 50.000 0.00 0.00 0.00 4.16
2520 6355 1.202417 ACAGCGTCGATCCTTATGTGG 60.202 52.381 0.00 0.00 0.00 4.17
2521 6356 2.209838 ACAGCGTCGATCCTTATGTG 57.790 50.000 0.00 0.00 0.00 3.21
2522 6357 2.287668 GCTACAGCGTCGATCCTTATGT 60.288 50.000 0.00 0.00 0.00 2.29
2523 6358 2.320367 GCTACAGCGTCGATCCTTATG 58.680 52.381 0.00 0.00 0.00 1.90
2524 6359 2.708386 GCTACAGCGTCGATCCTTAT 57.292 50.000 0.00 0.00 0.00 1.73
2559 6394 5.126384 TCCCTCAACAAACTTCACGATTTTT 59.874 36.000 0.00 0.00 0.00 1.94
2560 6395 4.642885 TCCCTCAACAAACTTCACGATTTT 59.357 37.500 0.00 0.00 0.00 1.82
2561 6396 4.204012 TCCCTCAACAAACTTCACGATTT 58.796 39.130 0.00 0.00 0.00 2.17
2562 6397 3.815401 CTCCCTCAACAAACTTCACGATT 59.185 43.478 0.00 0.00 0.00 3.34
2563 6398 3.181454 ACTCCCTCAACAAACTTCACGAT 60.181 43.478 0.00 0.00 0.00 3.73
2564 6399 2.169769 ACTCCCTCAACAAACTTCACGA 59.830 45.455 0.00 0.00 0.00 4.35
2565 6400 2.544267 GACTCCCTCAACAAACTTCACG 59.456 50.000 0.00 0.00 0.00 4.35
2566 6401 2.879026 GGACTCCCTCAACAAACTTCAC 59.121 50.000 0.00 0.00 0.00 3.18
2567 6402 2.777692 AGGACTCCCTCAACAAACTTCA 59.222 45.455 0.00 0.00 38.86 3.02
2568 6403 3.142174 CAGGACTCCCTCAACAAACTTC 58.858 50.000 0.00 0.00 42.02 3.01
2569 6404 2.158608 CCAGGACTCCCTCAACAAACTT 60.159 50.000 0.00 0.00 42.02 2.66
2570 6405 1.421646 CCAGGACTCCCTCAACAAACT 59.578 52.381 0.00 0.00 42.02 2.66
2571 6406 1.420138 TCCAGGACTCCCTCAACAAAC 59.580 52.381 0.00 0.00 42.02 2.93
2572 6407 1.420138 GTCCAGGACTCCCTCAACAAA 59.580 52.381 12.94 0.00 42.02 2.83
2573 6408 1.056660 GTCCAGGACTCCCTCAACAA 58.943 55.000 12.94 0.00 42.02 2.83
2574 6409 0.191064 AGTCCAGGACTCCCTCAACA 59.809 55.000 17.31 0.00 38.71 3.33
2575 6410 2.233305 TAGTCCAGGACTCCCTCAAC 57.767 55.000 26.42 0.00 42.40 3.18
2698 6533 1.898574 CCAAGCTTGCCTTCCACGT 60.899 57.895 21.43 0.00 0.00 4.49
2727 6562 7.507616 AGTCGATTACATAGGAAGGAATCTTCT 59.492 37.037 6.16 0.00 46.42 2.85
2748 6583 5.125097 GGAATCTAAGGTTACACAGAGTCGA 59.875 44.000 0.00 0.00 33.97 4.20
2756 6591 2.158856 CCGGGGGAATCTAAGGTTACAC 60.159 54.545 0.00 0.00 0.00 2.90
2764 6599 2.852714 TAGACACCGGGGGAATCTAA 57.147 50.000 9.50 0.00 0.00 2.10
2803 6638 5.222275 TGGTAATGAGTATATCCTCTCCGGT 60.222 44.000 0.00 0.00 32.50 5.28
2900 6736 4.025061 CCTGCTCGATTGATCTTGATGAAC 60.025 45.833 0.00 0.00 0.00 3.18
2917 6753 4.224762 AGGTAATACCCTACTTCCTGCTC 58.775 47.826 5.71 0.00 39.75 4.26
3010 6846 1.203441 GGGTAAGGGGTCCCGAACTT 61.203 60.000 0.48 2.40 41.95 2.66
3024 6860 0.680921 AACCGTCGGATCTCGGGTAA 60.681 55.000 20.51 0.00 45.68 2.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.