Multiple sequence alignment - TraesCS4D01G086600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G086600 chr4D 100.000 3281 0 0 1 3281 61988921 61992201 0.000000e+00 6059
1 TraesCS4D01G086600 chr4D 98.213 2630 35 5 633 3250 7014738 7012109 0.000000e+00 4586
2 TraesCS4D01G086600 chr4D 98.339 2408 34 3 633 3038 481098183 481100586 0.000000e+00 4220
3 TraesCS4D01G086600 chr4D 100.000 289 0 0 3419 3707 61992339 61992627 5.450000e-148 534
4 TraesCS4D01G086600 chr4D 96.124 258 9 1 3423 3680 508996451 508996195 1.590000e-113 420
5 TraesCS4D01G086600 chr4D 88.929 280 29 2 3429 3707 346107451 346107173 9.860000e-91 344
6 TraesCS4D01G086600 chr2D 98.272 2662 29 5 632 3281 158254136 158256792 0.000000e+00 4645
7 TraesCS4D01G086600 chr2D 97.603 2628 27 8 633 3248 537200733 537203336 0.000000e+00 4471
8 TraesCS4D01G086600 chr2D 97.001 2668 41 13 633 3281 360454928 360457575 0.000000e+00 4447
9 TraesCS4D01G086600 chr2D 97.126 870 6 2 2414 3281 2322630 2321778 0.000000e+00 1450
10 TraesCS4D01G086600 chr2D 100.000 289 0 0 3419 3707 360457774 360458062 5.450000e-148 534
11 TraesCS4D01G086600 chr2D 91.756 279 22 1 3429 3707 601042507 601042230 1.610000e-103 387
12 TraesCS4D01G086600 chr5D 98.163 2668 30 2 633 3281 444148167 444150834 0.000000e+00 4638
13 TraesCS4D01G086600 chr5D 97.650 2681 33 14 631 3281 38198796 38201476 0.000000e+00 4575
14 TraesCS4D01G086600 chr5D 100.000 289 0 0 3419 3707 444150991 444151279 5.450000e-148 534
15 TraesCS4D01G086600 chr5D 97.959 245 5 0 3463 3707 444165296 444165540 3.420000e-115 425
16 TraesCS4D01G086600 chr3D 98.014 2669 32 3 632 3279 245294092 245291424 0.000000e+00 4615
17 TraesCS4D01G086600 chr3D 97.421 1008 15 4 2251 3247 210993195 210994202 0.000000e+00 1707
18 TraesCS4D01G086600 chr3D 91.135 282 23 2 3423 3704 94449960 94450239 7.510000e-102 381
19 TraesCS4D01G086600 chr1D 98.331 2637 32 4 628 3262 485468928 485466302 0.000000e+00 4615
20 TraesCS4D01G086600 chr1D 97.975 2519 46 4 633 3148 318136725 318139241 0.000000e+00 4364
21 TraesCS4D01G086600 chr7D 97.449 2666 48 10 631 3277 116695998 116698662 0.000000e+00 4529
22 TraesCS4D01G086600 chr7D 97.461 2599 34 13 633 3203 78262380 78259786 0.000000e+00 4405
23 TraesCS4D01G086600 chr7D 90.909 286 24 2 3423 3707 428974997 428974713 2.090000e-102 383
24 TraesCS4D01G086600 chr4B 95.526 380 14 3 1 377 90716223 90715844 4.100000e-169 604
25 TraesCS4D01G086600 chr4B 96.863 255 6 1 380 632 90715810 90715556 3.420000e-115 425
26 TraesCS4D01G086600 chr4A 93.634 377 10 4 1 374 535252867 535253232 5.410000e-153 551
27 TraesCS4D01G086600 chr4A 95.703 256 11 0 377 632 535253266 535253521 2.660000e-111 412
28 TraesCS4D01G086600 chr6D 91.259 286 23 2 3423 3707 18603576 18603860 4.490000e-104 388


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G086600 chr4D 61988921 61992627 3706 False 3296.5 6059 100.0000 1 3707 2 chr4D.!!$F2 3706
1 TraesCS4D01G086600 chr4D 7012109 7014738 2629 True 4586.0 4586 98.2130 633 3250 1 chr4D.!!$R1 2617
2 TraesCS4D01G086600 chr4D 481098183 481100586 2403 False 4220.0 4220 98.3390 633 3038 1 chr4D.!!$F1 2405
3 TraesCS4D01G086600 chr2D 158254136 158256792 2656 False 4645.0 4645 98.2720 632 3281 1 chr2D.!!$F1 2649
4 TraesCS4D01G086600 chr2D 537200733 537203336 2603 False 4471.0 4471 97.6030 633 3248 1 chr2D.!!$F2 2615
5 TraesCS4D01G086600 chr2D 360454928 360458062 3134 False 2490.5 4447 98.5005 633 3707 2 chr2D.!!$F3 3074
6 TraesCS4D01G086600 chr2D 2321778 2322630 852 True 1450.0 1450 97.1260 2414 3281 1 chr2D.!!$R1 867
7 TraesCS4D01G086600 chr5D 38198796 38201476 2680 False 4575.0 4575 97.6500 631 3281 1 chr5D.!!$F1 2650
8 TraesCS4D01G086600 chr5D 444148167 444151279 3112 False 2586.0 4638 99.0815 633 3707 2 chr5D.!!$F3 3074
9 TraesCS4D01G086600 chr3D 245291424 245294092 2668 True 4615.0 4615 98.0140 632 3279 1 chr3D.!!$R1 2647
10 TraesCS4D01G086600 chr3D 210993195 210994202 1007 False 1707.0 1707 97.4210 2251 3247 1 chr3D.!!$F2 996
11 TraesCS4D01G086600 chr1D 485466302 485468928 2626 True 4615.0 4615 98.3310 628 3262 1 chr1D.!!$R1 2634
12 TraesCS4D01G086600 chr1D 318136725 318139241 2516 False 4364.0 4364 97.9750 633 3148 1 chr1D.!!$F1 2515
13 TraesCS4D01G086600 chr7D 116695998 116698662 2664 False 4529.0 4529 97.4490 631 3277 1 chr7D.!!$F1 2646
14 TraesCS4D01G086600 chr7D 78259786 78262380 2594 True 4405.0 4405 97.4610 633 3203 1 chr7D.!!$R1 2570
15 TraesCS4D01G086600 chr4B 90715556 90716223 667 True 514.5 604 96.1945 1 632 2 chr4B.!!$R1 631
16 TraesCS4D01G086600 chr4A 535252867 535253521 654 False 481.5 551 94.6685 1 632 2 chr4A.!!$F1 631

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
575 578 0.034756 TTGTTCCTCTAGCTGCGCAA 59.965 50.0 13.05 0.0 0.0 4.85 F
576 579 0.034756 TGTTCCTCTAGCTGCGCAAA 59.965 50.0 13.05 0.0 0.0 3.68 F
579 582 0.391661 TCCTCTAGCTGCGCAAAAGG 60.392 55.0 13.05 13.6 0.0 3.11 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2327 2390 2.057137 TTCTGCATTCATACCAGCCC 57.943 50.000 0.0 0.0 0.0 5.19 R
2490 2613 6.041296 ACTCTGCATTCTTCAACTCCAAATTT 59.959 34.615 0.0 0.0 0.0 1.82 R
3203 3428 3.976490 CTAGGGTGGCTCGGGGTCA 62.976 68.421 0.0 0.0 0.0 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 7.780008 AGCATGTGCAAACTATTACGTAATA 57.220 32.000 23.11 23.11 45.16 0.98
72 75 9.911788 AAAAAGGATTATGTCTGTATGACTGAT 57.088 29.630 0.00 0.00 45.54 2.90
75 78 9.593565 AAGGATTATGTCTGTATGACTGATAGA 57.406 33.333 0.00 0.00 45.54 1.98
76 79 9.241919 AGGATTATGTCTGTATGACTGATAGAG 57.758 37.037 0.00 0.00 45.54 2.43
77 80 9.019656 GGATTATGTCTGTATGACTGATAGAGT 57.980 37.037 0.00 0.00 45.54 3.24
81 84 7.569639 TGTCTGTATGACTGATAGAGTTACC 57.430 40.000 0.00 0.00 45.54 2.85
82 85 6.260271 TGTCTGTATGACTGATAGAGTTACCG 59.740 42.308 0.00 0.00 45.54 4.02
83 86 6.260493 GTCTGTATGACTGATAGAGTTACCGT 59.740 42.308 0.00 0.00 42.21 4.83
84 87 6.260271 TCTGTATGACTGATAGAGTTACCGTG 59.740 42.308 0.00 0.00 33.83 4.94
85 88 5.884232 TGTATGACTGATAGAGTTACCGTGT 59.116 40.000 0.00 0.00 33.83 4.49
86 89 5.916661 ATGACTGATAGAGTTACCGTGTT 57.083 39.130 0.00 0.00 33.83 3.32
87 90 5.717078 TGACTGATAGAGTTACCGTGTTT 57.283 39.130 0.00 0.00 33.83 2.83
88 91 5.706916 TGACTGATAGAGTTACCGTGTTTC 58.293 41.667 0.00 0.00 33.83 2.78
89 92 4.730657 ACTGATAGAGTTACCGTGTTTCG 58.269 43.478 0.00 0.00 39.52 3.46
90 93 3.504863 TGATAGAGTTACCGTGTTTCGC 58.495 45.455 0.00 0.00 38.35 4.70
91 94 3.057386 TGATAGAGTTACCGTGTTTCGCA 60.057 43.478 0.00 0.00 38.35 5.10
92 95 2.228138 AGAGTTACCGTGTTTCGCAA 57.772 45.000 0.00 0.00 38.35 4.85
93 96 2.762745 AGAGTTACCGTGTTTCGCAAT 58.237 42.857 0.00 0.00 38.35 3.56
94 97 2.735134 AGAGTTACCGTGTTTCGCAATC 59.265 45.455 0.00 0.00 38.35 2.67
95 98 2.477375 GAGTTACCGTGTTTCGCAATCA 59.523 45.455 0.00 0.00 38.35 2.57
96 99 3.071479 AGTTACCGTGTTTCGCAATCAT 58.929 40.909 0.00 0.00 38.35 2.45
97 100 4.247258 AGTTACCGTGTTTCGCAATCATA 58.753 39.130 0.00 0.00 38.35 2.15
98 101 4.092383 AGTTACCGTGTTTCGCAATCATAC 59.908 41.667 0.00 0.00 38.35 2.39
99 102 1.735571 ACCGTGTTTCGCAATCATACC 59.264 47.619 0.00 0.00 38.35 2.73
100 103 2.006888 CCGTGTTTCGCAATCATACCT 58.993 47.619 0.00 0.00 38.35 3.08
101 104 2.418628 CCGTGTTTCGCAATCATACCTT 59.581 45.455 0.00 0.00 38.35 3.50
102 105 3.619483 CCGTGTTTCGCAATCATACCTTA 59.381 43.478 0.00 0.00 38.35 2.69
103 106 4.093703 CCGTGTTTCGCAATCATACCTTAA 59.906 41.667 0.00 0.00 38.35 1.85
104 107 5.391097 CCGTGTTTCGCAATCATACCTTAAA 60.391 40.000 0.00 0.00 38.35 1.52
105 108 6.255215 CGTGTTTCGCAATCATACCTTAAAT 58.745 36.000 0.00 0.00 0.00 1.40
106 109 7.403421 CGTGTTTCGCAATCATACCTTAAATA 58.597 34.615 0.00 0.00 0.00 1.40
107 110 8.067784 CGTGTTTCGCAATCATACCTTAAATAT 58.932 33.333 0.00 0.00 0.00 1.28
108 111 9.382244 GTGTTTCGCAATCATACCTTAAATATC 57.618 33.333 0.00 0.00 0.00 1.63
109 112 9.337396 TGTTTCGCAATCATACCTTAAATATCT 57.663 29.630 0.00 0.00 0.00 1.98
112 115 9.554395 TTCGCAATCATACCTTAAATATCTTCA 57.446 29.630 0.00 0.00 0.00 3.02
113 116 9.554395 TCGCAATCATACCTTAAATATCTTCAA 57.446 29.630 0.00 0.00 0.00 2.69
132 135 9.631257 ATCTTCAATGTAATATTCATGTGTCCA 57.369 29.630 0.00 0.00 0.00 4.02
133 136 9.631257 TCTTCAATGTAATATTCATGTGTCCAT 57.369 29.630 0.00 0.00 0.00 3.41
149 152 2.431954 CCATGAGATGGCTCCAAAGT 57.568 50.000 0.00 0.00 44.70 2.66
150 153 3.565764 CCATGAGATGGCTCCAAAGTA 57.434 47.619 0.00 0.00 44.70 2.24
151 154 4.096190 CCATGAGATGGCTCCAAAGTAT 57.904 45.455 0.00 0.00 44.70 2.12
152 155 4.070716 CCATGAGATGGCTCCAAAGTATC 58.929 47.826 0.00 0.00 44.70 2.24
153 156 4.202440 CCATGAGATGGCTCCAAAGTATCT 60.202 45.833 0.00 0.00 44.70 1.98
154 157 4.679373 TGAGATGGCTCCAAAGTATCTC 57.321 45.455 8.72 8.72 41.15 2.75
155 158 3.389329 TGAGATGGCTCCAAAGTATCTCC 59.611 47.826 11.73 0.00 40.65 3.71
156 159 3.387962 AGATGGCTCCAAAGTATCTCCA 58.612 45.455 0.00 0.00 28.60 3.86
157 160 3.390639 AGATGGCTCCAAAGTATCTCCAG 59.609 47.826 0.00 0.00 28.60 3.86
158 161 1.839994 TGGCTCCAAAGTATCTCCAGG 59.160 52.381 0.00 0.00 0.00 4.45
159 162 2.119495 GGCTCCAAAGTATCTCCAGGA 58.881 52.381 0.00 0.00 0.00 3.86
160 163 2.103941 GGCTCCAAAGTATCTCCAGGAG 59.896 54.545 10.70 10.70 44.19 3.69
161 164 2.769095 GCTCCAAAGTATCTCCAGGAGT 59.231 50.000 16.65 6.58 43.47 3.85
162 165 3.961408 GCTCCAAAGTATCTCCAGGAGTA 59.039 47.826 16.65 5.60 43.47 2.59
163 166 4.406003 GCTCCAAAGTATCTCCAGGAGTAA 59.594 45.833 16.65 2.92 43.47 2.24
164 167 5.071115 GCTCCAAAGTATCTCCAGGAGTAAT 59.929 44.000 16.65 6.14 43.47 1.89
165 168 6.267928 GCTCCAAAGTATCTCCAGGAGTAATA 59.732 42.308 16.65 5.12 43.47 0.98
166 169 7.524698 GCTCCAAAGTATCTCCAGGAGTAATAG 60.525 44.444 16.65 3.79 43.47 1.73
167 170 7.363031 TCCAAAGTATCTCCAGGAGTAATAGT 58.637 38.462 16.65 7.87 0.00 2.12
168 171 8.508601 TCCAAAGTATCTCCAGGAGTAATAGTA 58.491 37.037 16.65 0.00 0.00 1.82
169 172 8.798402 CCAAAGTATCTCCAGGAGTAATAGTAG 58.202 40.741 16.65 7.19 0.00 2.57
170 173 8.301002 CAAAGTATCTCCAGGAGTAATAGTAGC 58.699 40.741 16.65 0.00 0.00 3.58
171 174 6.486941 AGTATCTCCAGGAGTAATAGTAGCC 58.513 44.000 16.65 0.00 0.00 3.93
172 175 4.808767 TCTCCAGGAGTAATAGTAGCCA 57.191 45.455 16.65 0.00 0.00 4.75
173 176 5.138758 TCTCCAGGAGTAATAGTAGCCAA 57.861 43.478 16.65 0.00 0.00 4.52
174 177 5.141182 TCTCCAGGAGTAATAGTAGCCAAG 58.859 45.833 16.65 0.00 0.00 3.61
175 178 4.880164 TCCAGGAGTAATAGTAGCCAAGT 58.120 43.478 0.00 0.00 0.00 3.16
176 179 5.278061 TCCAGGAGTAATAGTAGCCAAGTT 58.722 41.667 0.00 0.00 0.00 2.66
177 180 5.724854 TCCAGGAGTAATAGTAGCCAAGTTT 59.275 40.000 0.00 0.00 0.00 2.66
178 181 6.899075 TCCAGGAGTAATAGTAGCCAAGTTTA 59.101 38.462 0.00 0.00 0.00 2.01
179 182 6.985059 CCAGGAGTAATAGTAGCCAAGTTTAC 59.015 42.308 0.00 0.00 0.00 2.01
180 183 7.364408 CCAGGAGTAATAGTAGCCAAGTTTACA 60.364 40.741 0.00 0.00 0.00 2.41
181 184 7.707035 CAGGAGTAATAGTAGCCAAGTTTACAG 59.293 40.741 0.00 0.00 0.00 2.74
182 185 6.985059 GGAGTAATAGTAGCCAAGTTTACAGG 59.015 42.308 0.00 0.00 0.00 4.00
183 186 7.364497 GGAGTAATAGTAGCCAAGTTTACAGGT 60.364 40.741 0.00 0.00 0.00 4.00
184 187 8.599624 AGTAATAGTAGCCAAGTTTACAGGTA 57.400 34.615 0.00 0.00 0.00 3.08
185 188 8.473219 AGTAATAGTAGCCAAGTTTACAGGTAC 58.527 37.037 0.00 0.00 0.00 3.34
186 189 6.862469 ATAGTAGCCAAGTTTACAGGTACA 57.138 37.500 0.00 0.00 0.00 2.90
187 190 5.556006 AGTAGCCAAGTTTACAGGTACAA 57.444 39.130 0.00 0.00 0.00 2.41
188 191 5.932455 AGTAGCCAAGTTTACAGGTACAAA 58.068 37.500 0.00 0.00 0.00 2.83
189 192 5.995897 AGTAGCCAAGTTTACAGGTACAAAG 59.004 40.000 0.00 0.00 0.00 2.77
190 193 3.568430 AGCCAAGTTTACAGGTACAAAGC 59.432 43.478 0.00 0.00 0.00 3.51
191 194 3.305131 GCCAAGTTTACAGGTACAAAGCC 60.305 47.826 0.00 0.00 0.00 4.35
192 195 3.058501 CCAAGTTTACAGGTACAAAGCCG 60.059 47.826 0.00 0.00 0.00 5.52
193 196 3.480505 AGTTTACAGGTACAAAGCCGT 57.519 42.857 0.00 0.00 0.00 5.68
194 197 3.396560 AGTTTACAGGTACAAAGCCGTC 58.603 45.455 0.00 0.00 0.00 4.79
195 198 3.132925 GTTTACAGGTACAAAGCCGTCA 58.867 45.455 0.00 0.00 0.00 4.35
196 199 2.443887 TACAGGTACAAAGCCGTCAC 57.556 50.000 0.00 0.00 0.00 3.67
197 200 0.466543 ACAGGTACAAAGCCGTCACA 59.533 50.000 0.00 0.00 0.00 3.58
198 201 1.134340 ACAGGTACAAAGCCGTCACAA 60.134 47.619 0.00 0.00 0.00 3.33
199 202 2.151202 CAGGTACAAAGCCGTCACAAT 58.849 47.619 0.00 0.00 0.00 2.71
200 203 2.159627 CAGGTACAAAGCCGTCACAATC 59.840 50.000 0.00 0.00 0.00 2.67
201 204 1.467342 GGTACAAAGCCGTCACAATCC 59.533 52.381 0.00 0.00 0.00 3.01
202 205 2.147958 GTACAAAGCCGTCACAATCCA 58.852 47.619 0.00 0.00 0.00 3.41
203 206 1.686355 ACAAAGCCGTCACAATCCAA 58.314 45.000 0.00 0.00 0.00 3.53
204 207 1.608590 ACAAAGCCGTCACAATCCAAG 59.391 47.619 0.00 0.00 0.00 3.61
205 208 1.608590 CAAAGCCGTCACAATCCAAGT 59.391 47.619 0.00 0.00 0.00 3.16
206 209 1.981256 AAGCCGTCACAATCCAAGTT 58.019 45.000 0.00 0.00 0.00 2.66
207 210 2.851263 AGCCGTCACAATCCAAGTTA 57.149 45.000 0.00 0.00 0.00 2.24
208 211 2.699954 AGCCGTCACAATCCAAGTTAG 58.300 47.619 0.00 0.00 0.00 2.34
209 212 2.301870 AGCCGTCACAATCCAAGTTAGA 59.698 45.455 0.00 0.00 0.00 2.10
210 213 3.071479 GCCGTCACAATCCAAGTTAGAA 58.929 45.455 0.00 0.00 0.00 2.10
211 214 3.120304 GCCGTCACAATCCAAGTTAGAAC 60.120 47.826 0.00 0.00 0.00 3.01
212 215 4.062293 CCGTCACAATCCAAGTTAGAACA 58.938 43.478 0.00 0.00 0.00 3.18
213 216 4.695455 CCGTCACAATCCAAGTTAGAACAT 59.305 41.667 0.00 0.00 0.00 2.71
214 217 5.163854 CCGTCACAATCCAAGTTAGAACATC 60.164 44.000 0.00 0.00 0.00 3.06
215 218 5.163854 CGTCACAATCCAAGTTAGAACATCC 60.164 44.000 0.00 0.00 0.00 3.51
216 219 5.705441 GTCACAATCCAAGTTAGAACATCCA 59.295 40.000 0.00 0.00 0.00 3.41
217 220 6.375455 GTCACAATCCAAGTTAGAACATCCAT 59.625 38.462 0.00 0.00 0.00 3.41
218 221 6.947733 TCACAATCCAAGTTAGAACATCCATT 59.052 34.615 0.00 0.00 0.00 3.16
219 222 7.121168 TCACAATCCAAGTTAGAACATCCATTC 59.879 37.037 0.00 0.00 0.00 2.67
220 223 7.121759 CACAATCCAAGTTAGAACATCCATTCT 59.878 37.037 0.00 0.00 41.81 2.40
221 224 7.671398 ACAATCCAAGTTAGAACATCCATTCTT 59.329 33.333 0.00 0.00 39.65 2.52
222 225 7.872113 ATCCAAGTTAGAACATCCATTCTTC 57.128 36.000 0.00 0.00 39.65 2.87
223 226 6.180472 TCCAAGTTAGAACATCCATTCTTCC 58.820 40.000 0.00 0.00 39.65 3.46
224 227 6.012508 TCCAAGTTAGAACATCCATTCTTCCT 60.013 38.462 0.00 0.00 39.65 3.36
225 228 7.182026 TCCAAGTTAGAACATCCATTCTTCCTA 59.818 37.037 0.00 0.00 39.65 2.94
226 229 7.995488 CCAAGTTAGAACATCCATTCTTCCTAT 59.005 37.037 0.00 0.00 39.65 2.57
227 230 9.050601 CAAGTTAGAACATCCATTCTTCCTATC 57.949 37.037 0.00 0.00 39.65 2.08
228 231 8.324191 AGTTAGAACATCCATTCTTCCTATCA 57.676 34.615 0.00 0.00 39.65 2.15
229 232 8.428063 AGTTAGAACATCCATTCTTCCTATCAG 58.572 37.037 0.00 0.00 39.65 2.90
230 233 6.821616 AGAACATCCATTCTTCCTATCAGT 57.178 37.500 0.00 0.00 35.29 3.41
231 234 6.825610 AGAACATCCATTCTTCCTATCAGTC 58.174 40.000 0.00 0.00 35.29 3.51
232 235 6.614906 AGAACATCCATTCTTCCTATCAGTCT 59.385 38.462 0.00 0.00 35.29 3.24
233 236 6.821616 ACATCCATTCTTCCTATCAGTCTT 57.178 37.500 0.00 0.00 0.00 3.01
234 237 6.825610 ACATCCATTCTTCCTATCAGTCTTC 58.174 40.000 0.00 0.00 0.00 2.87
235 238 6.614906 ACATCCATTCTTCCTATCAGTCTTCT 59.385 38.462 0.00 0.00 0.00 2.85
236 239 6.477053 TCCATTCTTCCTATCAGTCTTCTG 57.523 41.667 0.00 0.00 42.54 3.02
237 240 5.960811 TCCATTCTTCCTATCAGTCTTCTGT 59.039 40.000 0.00 0.00 41.91 3.41
238 241 6.441924 TCCATTCTTCCTATCAGTCTTCTGTT 59.558 38.462 0.00 0.00 41.91 3.16
239 242 6.760770 CCATTCTTCCTATCAGTCTTCTGTTC 59.239 42.308 0.00 0.00 41.91 3.18
240 243 6.918067 TTCTTCCTATCAGTCTTCTGTTCA 57.082 37.500 0.00 0.00 41.91 3.18
241 244 6.918067 TCTTCCTATCAGTCTTCTGTTCAA 57.082 37.500 0.00 0.00 41.91 2.69
242 245 7.303182 TCTTCCTATCAGTCTTCTGTTCAAA 57.697 36.000 0.00 0.00 41.91 2.69
243 246 7.911651 TCTTCCTATCAGTCTTCTGTTCAAAT 58.088 34.615 0.00 0.00 41.91 2.32
244 247 8.378565 TCTTCCTATCAGTCTTCTGTTCAAATT 58.621 33.333 0.00 0.00 41.91 1.82
245 248 9.658799 CTTCCTATCAGTCTTCTGTTCAAATTA 57.341 33.333 0.00 0.00 41.91 1.40
252 255 9.567848 TCAGTCTTCTGTTCAAATTAAAAACAC 57.432 29.630 0.00 0.00 41.91 3.32
253 256 9.352784 CAGTCTTCTGTTCAAATTAAAAACACA 57.647 29.630 0.00 0.00 36.97 3.72
280 283 9.844790 TTTCAAGAACATATCAGTTAAATGCAG 57.155 29.630 0.00 0.00 0.00 4.41
281 284 8.565896 TCAAGAACATATCAGTTAAATGCAGT 57.434 30.769 0.00 0.00 0.00 4.40
282 285 8.668353 TCAAGAACATATCAGTTAAATGCAGTC 58.332 33.333 0.00 0.00 0.00 3.51
283 286 8.671921 CAAGAACATATCAGTTAAATGCAGTCT 58.328 33.333 0.00 0.00 0.00 3.24
284 287 8.798859 AGAACATATCAGTTAAATGCAGTCTT 57.201 30.769 0.00 0.00 0.00 3.01
285 288 8.887717 AGAACATATCAGTTAAATGCAGTCTTC 58.112 33.333 0.00 0.00 0.00 2.87
286 289 7.239166 ACATATCAGTTAAATGCAGTCTTCG 57.761 36.000 0.00 0.00 0.00 3.79
287 290 6.818644 ACATATCAGTTAAATGCAGTCTTCGT 59.181 34.615 0.00 0.00 0.00 3.85
288 291 7.979537 ACATATCAGTTAAATGCAGTCTTCGTA 59.020 33.333 0.00 0.00 0.00 3.43
289 292 8.982685 CATATCAGTTAAATGCAGTCTTCGTAT 58.017 33.333 0.00 0.00 0.00 3.06
290 293 7.849804 ATCAGTTAAATGCAGTCTTCGTATT 57.150 32.000 0.00 0.00 0.00 1.89
291 294 8.942338 ATCAGTTAAATGCAGTCTTCGTATTA 57.058 30.769 0.00 0.00 0.00 0.98
292 295 8.942338 TCAGTTAAATGCAGTCTTCGTATTAT 57.058 30.769 0.00 0.00 0.00 1.28
293 296 8.817100 TCAGTTAAATGCAGTCTTCGTATTATG 58.183 33.333 0.00 0.00 0.00 1.90
294 297 8.817100 CAGTTAAATGCAGTCTTCGTATTATGA 58.183 33.333 0.00 0.00 0.00 2.15
295 298 9.378551 AGTTAAATGCAGTCTTCGTATTATGAA 57.621 29.630 0.00 0.00 0.00 2.57
296 299 9.982291 GTTAAATGCAGTCTTCGTATTATGAAA 57.018 29.630 0.00 0.00 0.00 2.69
299 302 8.437360 AATGCAGTCTTCGTATTATGAAATGA 57.563 30.769 0.00 0.00 0.00 2.57
300 303 7.841915 TGCAGTCTTCGTATTATGAAATGAA 57.158 32.000 0.30 0.00 0.00 2.57
301 304 8.262715 TGCAGTCTTCGTATTATGAAATGAAA 57.737 30.769 0.30 0.00 0.00 2.69
302 305 8.892723 TGCAGTCTTCGTATTATGAAATGAAAT 58.107 29.630 0.30 0.00 0.00 2.17
303 306 9.722056 GCAGTCTTCGTATTATGAAATGAAATT 57.278 29.630 0.30 0.00 38.98 1.82
326 329 9.734620 AATTTGTAAATTGATCACATCATACCG 57.265 29.630 0.00 0.00 39.39 4.02
327 330 7.857734 TTGTAAATTGATCACATCATACCGT 57.142 32.000 0.00 0.00 39.39 4.83
328 331 7.477144 TGTAAATTGATCACATCATACCGTC 57.523 36.000 0.00 0.00 39.39 4.79
329 332 6.481976 TGTAAATTGATCACATCATACCGTCC 59.518 38.462 0.00 0.00 39.39 4.79
330 333 4.687901 ATTGATCACATCATACCGTCCA 57.312 40.909 0.00 0.00 39.39 4.02
331 334 3.733443 TGATCACATCATACCGTCCAG 57.267 47.619 0.00 0.00 33.59 3.86
332 335 3.031013 TGATCACATCATACCGTCCAGT 58.969 45.455 0.00 0.00 33.59 4.00
333 336 4.211920 TGATCACATCATACCGTCCAGTA 58.788 43.478 0.00 0.00 33.59 2.74
334 337 4.832823 TGATCACATCATACCGTCCAGTAT 59.167 41.667 0.00 0.00 33.59 2.12
335 338 6.007703 TGATCACATCATACCGTCCAGTATA 58.992 40.000 0.00 0.00 33.59 1.47
336 339 5.700722 TCACATCATACCGTCCAGTATAC 57.299 43.478 0.00 0.00 31.66 1.47
337 340 4.214758 TCACATCATACCGTCCAGTATACG 59.785 45.833 0.00 0.00 40.01 3.06
338 341 4.214758 CACATCATACCGTCCAGTATACGA 59.785 45.833 0.00 0.00 42.90 3.43
339 342 4.823442 ACATCATACCGTCCAGTATACGAA 59.177 41.667 0.00 0.00 42.90 3.85
340 343 5.048921 ACATCATACCGTCCAGTATACGAAG 60.049 44.000 0.00 0.00 42.90 3.79
341 344 4.707105 TCATACCGTCCAGTATACGAAGA 58.293 43.478 0.00 0.00 42.90 2.87
342 345 5.125356 TCATACCGTCCAGTATACGAAGAA 58.875 41.667 0.00 0.00 42.90 2.52
343 346 5.589855 TCATACCGTCCAGTATACGAAGAAA 59.410 40.000 0.00 0.00 42.90 2.52
344 347 4.996788 ACCGTCCAGTATACGAAGAAAT 57.003 40.909 0.00 0.00 42.90 2.17
345 348 4.679662 ACCGTCCAGTATACGAAGAAATG 58.320 43.478 0.00 0.00 42.90 2.32
346 349 4.159135 ACCGTCCAGTATACGAAGAAATGT 59.841 41.667 0.00 0.00 42.90 2.71
347 350 4.503007 CCGTCCAGTATACGAAGAAATGTG 59.497 45.833 0.00 0.00 42.90 3.21
348 351 5.100259 CGTCCAGTATACGAAGAAATGTGT 58.900 41.667 0.00 0.00 42.90 3.72
349 352 5.575606 CGTCCAGTATACGAAGAAATGTGTT 59.424 40.000 0.00 0.00 42.90 3.32
350 353 6.090358 CGTCCAGTATACGAAGAAATGTGTTT 59.910 38.462 0.00 0.00 42.90 2.83
351 354 7.359765 CGTCCAGTATACGAAGAAATGTGTTTT 60.360 37.037 0.00 0.00 42.90 2.43
352 355 7.744715 GTCCAGTATACGAAGAAATGTGTTTTG 59.255 37.037 0.00 0.00 0.00 2.44
353 356 6.523201 CCAGTATACGAAGAAATGTGTTTTGC 59.477 38.462 0.00 0.00 0.00 3.68
354 357 7.298122 CAGTATACGAAGAAATGTGTTTTGCT 58.702 34.615 0.00 0.00 0.00 3.91
355 358 8.440059 CAGTATACGAAGAAATGTGTTTTGCTA 58.560 33.333 0.00 0.00 0.00 3.49
356 359 9.162764 AGTATACGAAGAAATGTGTTTTGCTAT 57.837 29.630 0.00 0.00 0.00 2.97
357 360 9.422196 GTATACGAAGAAATGTGTTTTGCTATC 57.578 33.333 0.00 0.00 0.00 2.08
358 361 6.312399 ACGAAGAAATGTGTTTTGCTATCA 57.688 33.333 0.00 0.00 0.00 2.15
359 362 6.142817 ACGAAGAAATGTGTTTTGCTATCAC 58.857 36.000 0.00 0.00 0.00 3.06
360 363 5.569059 CGAAGAAATGTGTTTTGCTATCACC 59.431 40.000 0.00 0.00 0.00 4.02
361 364 6.403866 AAGAAATGTGTTTTGCTATCACCA 57.596 33.333 0.00 0.00 0.00 4.17
362 365 6.594788 AGAAATGTGTTTTGCTATCACCAT 57.405 33.333 0.00 0.00 0.00 3.55
363 366 7.701539 AGAAATGTGTTTTGCTATCACCATA 57.298 32.000 0.00 0.00 0.00 2.74
364 367 8.297470 AGAAATGTGTTTTGCTATCACCATAT 57.703 30.769 0.00 0.00 0.00 1.78
365 368 9.407380 AGAAATGTGTTTTGCTATCACCATATA 57.593 29.630 0.00 0.00 0.00 0.86
366 369 9.669353 GAAATGTGTTTTGCTATCACCATATAG 57.331 33.333 0.00 0.00 33.37 1.31
367 370 8.978874 AATGTGTTTTGCTATCACCATATAGA 57.021 30.769 0.00 0.00 32.13 1.98
368 371 9.578576 AATGTGTTTTGCTATCACCATATAGAT 57.421 29.630 0.00 0.00 32.13 1.98
369 372 8.607441 TGTGTTTTGCTATCACCATATAGATC 57.393 34.615 0.00 0.00 32.13 2.75
370 373 8.432013 TGTGTTTTGCTATCACCATATAGATCT 58.568 33.333 0.00 0.00 32.13 2.75
371 374 8.715998 GTGTTTTGCTATCACCATATAGATCTG 58.284 37.037 5.18 0.00 32.13 2.90
372 375 7.879677 TGTTTTGCTATCACCATATAGATCTGG 59.120 37.037 5.18 0.74 38.55 3.86
373 376 7.797121 TTTGCTATCACCATATAGATCTGGA 57.203 36.000 5.18 0.00 36.35 3.86
374 377 6.782082 TGCTATCACCATATAGATCTGGAC 57.218 41.667 5.18 0.00 36.35 4.02
375 378 5.658634 TGCTATCACCATATAGATCTGGACC 59.341 44.000 5.18 0.00 36.35 4.46
376 379 5.658634 GCTATCACCATATAGATCTGGACCA 59.341 44.000 5.18 0.00 36.35 4.02
377 380 6.326064 GCTATCACCATATAGATCTGGACCAT 59.674 42.308 5.18 0.00 36.35 3.55
378 381 6.556974 ATCACCATATAGATCTGGACCATG 57.443 41.667 5.18 1.69 36.35 3.66
379 382 5.654370 TCACCATATAGATCTGGACCATGA 58.346 41.667 5.18 0.05 36.35 3.07
380 383 6.084060 TCACCATATAGATCTGGACCATGAA 58.916 40.000 5.18 0.00 36.35 2.57
381 384 6.732390 TCACCATATAGATCTGGACCATGAAT 59.268 38.462 5.18 0.00 36.35 2.57
382 385 6.822170 CACCATATAGATCTGGACCATGAATG 59.178 42.308 5.18 0.00 36.35 2.67
383 386 6.069789 ACCATATAGATCTGGACCATGAATGG 60.070 42.308 5.18 7.82 43.42 3.16
384 387 8.957842 ACCATATAGATCTGGACCATGAATGGG 61.958 44.444 13.79 0.00 42.77 4.00
393 396 2.634982 CCATGAATGGGTCAACAACG 57.365 50.000 1.01 0.00 44.31 4.10
394 397 1.885887 CCATGAATGGGTCAACAACGT 59.114 47.619 1.01 0.00 44.31 3.99
395 398 2.295909 CCATGAATGGGTCAACAACGTT 59.704 45.455 0.00 0.00 44.31 3.99
396 399 3.504134 CCATGAATGGGTCAACAACGTTA 59.496 43.478 0.00 0.00 44.31 3.18
397 400 4.022762 CCATGAATGGGTCAACAACGTTAA 60.023 41.667 0.00 0.00 44.31 2.01
398 401 5.336372 CCATGAATGGGTCAACAACGTTAAT 60.336 40.000 0.00 0.00 44.31 1.40
399 402 5.365403 TGAATGGGTCAACAACGTTAATC 57.635 39.130 0.00 0.00 31.51 1.75
400 403 4.216687 TGAATGGGTCAACAACGTTAATCC 59.783 41.667 0.00 0.00 31.51 3.01
401 404 3.210232 TGGGTCAACAACGTTAATCCA 57.790 42.857 0.00 0.00 0.00 3.41
402 405 3.142951 TGGGTCAACAACGTTAATCCAG 58.857 45.455 0.00 0.00 0.00 3.86
403 406 3.181453 TGGGTCAACAACGTTAATCCAGA 60.181 43.478 0.00 0.00 0.00 3.86
404 407 3.187842 GGGTCAACAACGTTAATCCAGAC 59.812 47.826 0.00 3.91 0.00 3.51
405 408 3.187842 GGTCAACAACGTTAATCCAGACC 59.812 47.826 0.00 9.31 36.60 3.85
406 409 3.810941 GTCAACAACGTTAATCCAGACCA 59.189 43.478 0.00 0.00 0.00 4.02
407 410 4.454504 GTCAACAACGTTAATCCAGACCAT 59.545 41.667 0.00 0.00 0.00 3.55
408 411 4.454161 TCAACAACGTTAATCCAGACCATG 59.546 41.667 0.00 0.00 0.00 3.66
409 412 4.280436 ACAACGTTAATCCAGACCATGA 57.720 40.909 0.00 0.00 0.00 3.07
410 413 4.647611 ACAACGTTAATCCAGACCATGAA 58.352 39.130 0.00 0.00 0.00 2.57
411 414 5.253330 ACAACGTTAATCCAGACCATGAAT 58.747 37.500 0.00 0.00 0.00 2.57
412 415 6.411376 ACAACGTTAATCCAGACCATGAATA 58.589 36.000 0.00 0.00 0.00 1.75
413 416 7.054124 ACAACGTTAATCCAGACCATGAATAT 58.946 34.615 0.00 0.00 0.00 1.28
414 417 7.556275 ACAACGTTAATCCAGACCATGAATATT 59.444 33.333 0.00 0.00 0.00 1.28
415 418 8.405531 CAACGTTAATCCAGACCATGAATATTT 58.594 33.333 0.00 0.00 0.00 1.40
416 419 7.930217 ACGTTAATCCAGACCATGAATATTTG 58.070 34.615 0.00 0.00 0.00 2.32
417 420 6.857964 CGTTAATCCAGACCATGAATATTTGC 59.142 38.462 0.00 0.00 0.00 3.68
418 421 5.796424 AATCCAGACCATGAATATTTGCC 57.204 39.130 0.00 0.00 0.00 4.52
419 422 3.213506 TCCAGACCATGAATATTTGCCG 58.786 45.455 0.00 0.00 0.00 5.69
420 423 2.951642 CCAGACCATGAATATTTGCCGT 59.048 45.455 0.00 0.00 0.00 5.68
421 424 3.243168 CCAGACCATGAATATTTGCCGTG 60.243 47.826 0.00 0.00 0.00 4.94
422 425 3.627123 CAGACCATGAATATTTGCCGTGA 59.373 43.478 0.00 0.00 0.00 4.35
423 426 3.879295 AGACCATGAATATTTGCCGTGAG 59.121 43.478 0.00 0.00 0.00 3.51
437 440 0.868406 CGTGAGGTCTTGAGTTTGCC 59.132 55.000 0.00 0.00 0.00 4.52
438 441 0.868406 GTGAGGTCTTGAGTTTGCCG 59.132 55.000 0.00 0.00 0.00 5.69
439 442 0.884704 TGAGGTCTTGAGTTTGCCGC 60.885 55.000 0.00 0.00 0.00 6.53
440 443 0.603975 GAGGTCTTGAGTTTGCCGCT 60.604 55.000 0.00 0.00 0.00 5.52
441 444 0.685097 AGGTCTTGAGTTTGCCGCTA 59.315 50.000 0.00 0.00 0.00 4.26
442 445 1.079503 GGTCTTGAGTTTGCCGCTAG 58.920 55.000 0.00 0.00 0.00 3.42
443 446 1.079503 GTCTTGAGTTTGCCGCTAGG 58.920 55.000 0.00 0.00 41.62 3.02
444 447 0.973632 TCTTGAGTTTGCCGCTAGGA 59.026 50.000 0.00 0.00 41.02 2.94
445 448 1.555075 TCTTGAGTTTGCCGCTAGGAT 59.445 47.619 0.00 0.00 41.02 3.24
446 449 2.027192 TCTTGAGTTTGCCGCTAGGATT 60.027 45.455 0.00 0.00 41.02 3.01
447 450 1.737838 TGAGTTTGCCGCTAGGATTG 58.262 50.000 0.00 0.00 41.02 2.67
448 451 1.017387 GAGTTTGCCGCTAGGATTGG 58.983 55.000 0.00 0.00 41.02 3.16
452 455 2.124320 GCCGCTAGGATTGGCCAA 60.124 61.111 23.00 23.00 43.06 4.52
453 456 2.189499 GCCGCTAGGATTGGCCAAG 61.189 63.158 24.94 10.88 43.06 3.61
454 457 1.526917 CCGCTAGGATTGGCCAAGG 60.527 63.158 24.94 13.67 41.02 3.61
455 458 1.526917 CGCTAGGATTGGCCAAGGG 60.527 63.158 24.94 13.99 40.02 3.95
456 459 1.922821 GCTAGGATTGGCCAAGGGA 59.077 57.895 24.94 8.08 40.02 4.20
457 460 0.466372 GCTAGGATTGGCCAAGGGAC 60.466 60.000 24.94 13.23 40.02 4.46
458 461 0.918983 CTAGGATTGGCCAAGGGACA 59.081 55.000 24.94 6.85 40.08 4.02
459 462 1.496429 CTAGGATTGGCCAAGGGACAT 59.504 52.381 24.94 14.37 42.18 3.06
460 463 1.607225 AGGATTGGCCAAGGGACATA 58.393 50.000 24.94 0.00 42.18 2.29
461 464 1.929494 AGGATTGGCCAAGGGACATAA 59.071 47.619 24.94 0.00 42.18 1.90
462 465 2.314549 AGGATTGGCCAAGGGACATAAA 59.685 45.455 24.94 0.00 42.18 1.40
463 466 3.103742 GGATTGGCCAAGGGACATAAAA 58.896 45.455 24.94 0.00 42.18 1.52
464 467 3.118775 GGATTGGCCAAGGGACATAAAAC 60.119 47.826 24.94 0.00 42.18 2.43
465 468 2.990740 TGGCCAAGGGACATAAAACT 57.009 45.000 0.61 0.00 34.69 2.66
466 469 3.252554 TGGCCAAGGGACATAAAACTT 57.747 42.857 0.61 0.00 34.69 2.66
467 470 3.582164 TGGCCAAGGGACATAAAACTTT 58.418 40.909 0.61 0.00 34.69 2.66
468 471 3.323403 TGGCCAAGGGACATAAAACTTTG 59.677 43.478 0.61 0.00 34.69 2.77
469 472 3.576550 GGCCAAGGGACATAAAACTTTGA 59.423 43.478 0.00 0.00 0.00 2.69
470 473 4.321974 GGCCAAGGGACATAAAACTTTGAG 60.322 45.833 0.00 0.00 0.00 3.02
471 474 4.280929 GCCAAGGGACATAAAACTTTGAGT 59.719 41.667 0.00 0.00 0.00 3.41
472 475 5.475564 GCCAAGGGACATAAAACTTTGAGTA 59.524 40.000 0.00 0.00 0.00 2.59
473 476 6.569801 GCCAAGGGACATAAAACTTTGAGTAC 60.570 42.308 0.00 0.00 0.00 2.73
474 477 6.072119 CCAAGGGACATAAAACTTTGAGTACC 60.072 42.308 0.00 0.00 32.56 3.34
475 478 6.195600 AGGGACATAAAACTTTGAGTACCA 57.804 37.500 10.78 0.00 33.94 3.25
476 479 6.002082 AGGGACATAAAACTTTGAGTACCAC 58.998 40.000 10.78 0.00 33.94 4.16
477 480 5.106830 GGGACATAAAACTTTGAGTACCACG 60.107 44.000 0.00 0.00 32.63 4.94
478 481 5.467735 GGACATAAAACTTTGAGTACCACGT 59.532 40.000 0.00 0.00 0.00 4.49
479 482 6.347160 GGACATAAAACTTTGAGTACCACGTC 60.347 42.308 0.00 0.00 0.00 4.34
480 483 6.285990 ACATAAAACTTTGAGTACCACGTCT 58.714 36.000 0.00 0.00 0.00 4.18
481 484 7.436118 ACATAAAACTTTGAGTACCACGTCTA 58.564 34.615 0.00 0.00 0.00 2.59
482 485 8.092687 ACATAAAACTTTGAGTACCACGTCTAT 58.907 33.333 0.00 0.00 0.00 1.98
483 486 6.780706 AAAACTTTGAGTACCACGTCTATG 57.219 37.500 0.00 0.00 0.00 2.23
484 487 5.717078 AACTTTGAGTACCACGTCTATGA 57.283 39.130 0.00 0.00 0.00 2.15
485 488 5.056894 ACTTTGAGTACCACGTCTATGAC 57.943 43.478 0.00 0.00 0.00 3.06
486 489 4.765856 ACTTTGAGTACCACGTCTATGACT 59.234 41.667 0.00 0.00 0.00 3.41
487 490 5.942236 ACTTTGAGTACCACGTCTATGACTA 59.058 40.000 0.00 0.00 0.00 2.59
488 491 6.432162 ACTTTGAGTACCACGTCTATGACTAA 59.568 38.462 0.00 0.00 0.00 2.24
489 492 5.808042 TGAGTACCACGTCTATGACTAAC 57.192 43.478 0.00 0.00 0.00 2.34
490 493 5.247862 TGAGTACCACGTCTATGACTAACA 58.752 41.667 0.00 0.00 0.00 2.41
491 494 5.706833 TGAGTACCACGTCTATGACTAACAA 59.293 40.000 0.00 0.00 0.00 2.83
492 495 6.207221 TGAGTACCACGTCTATGACTAACAAA 59.793 38.462 0.00 0.00 0.00 2.83
493 496 6.385033 AGTACCACGTCTATGACTAACAAAC 58.615 40.000 0.00 0.00 0.00 2.93
494 497 5.204409 ACCACGTCTATGACTAACAAACA 57.796 39.130 0.00 0.00 0.00 2.83
495 498 4.986659 ACCACGTCTATGACTAACAAACAC 59.013 41.667 0.00 0.00 0.00 3.32
496 499 4.986034 CCACGTCTATGACTAACAAACACA 59.014 41.667 0.00 0.00 0.00 3.72
497 500 5.464057 CCACGTCTATGACTAACAAACACAA 59.536 40.000 0.00 0.00 0.00 3.33
498 501 6.147164 CCACGTCTATGACTAACAAACACAAT 59.853 38.462 0.00 0.00 0.00 2.71
499 502 7.329962 CCACGTCTATGACTAACAAACACAATA 59.670 37.037 0.00 0.00 0.00 1.90
500 503 8.869897 CACGTCTATGACTAACAAACACAATAT 58.130 33.333 0.00 0.00 0.00 1.28
501 504 9.431887 ACGTCTATGACTAACAAACACAATATT 57.568 29.630 0.00 0.00 0.00 1.28
508 511 7.967854 TGACTAACAAACACAATATTATGCAGC 59.032 33.333 0.00 0.00 0.00 5.25
509 512 7.825681 ACTAACAAACACAATATTATGCAGCA 58.174 30.769 0.00 0.00 0.00 4.41
510 513 8.303156 ACTAACAAACACAATATTATGCAGCAA 58.697 29.630 0.00 0.00 0.00 3.91
511 514 6.949578 ACAAACACAATATTATGCAGCAAC 57.050 33.333 0.00 0.00 0.00 4.17
512 515 6.453943 ACAAACACAATATTATGCAGCAACA 58.546 32.000 0.00 0.00 0.00 3.33
513 516 6.587226 ACAAACACAATATTATGCAGCAACAG 59.413 34.615 0.00 0.00 0.00 3.16
514 517 4.675510 ACACAATATTATGCAGCAACAGC 58.324 39.130 0.00 0.00 0.00 4.40
515 518 4.400251 ACACAATATTATGCAGCAACAGCT 59.600 37.500 0.00 0.00 39.75 4.24
516 519 5.105635 ACACAATATTATGCAGCAACAGCTT 60.106 36.000 0.00 0.00 36.19 3.74
517 520 5.231357 CACAATATTATGCAGCAACAGCTTG 59.769 40.000 0.00 4.08 36.19 4.01
518 521 5.125900 ACAATATTATGCAGCAACAGCTTGA 59.874 36.000 0.00 0.00 36.19 3.02
519 522 3.777465 ATTATGCAGCAACAGCTTGAG 57.223 42.857 0.00 0.00 36.19 3.02
520 523 2.189594 TATGCAGCAACAGCTTGAGT 57.810 45.000 0.00 0.00 36.19 3.41
521 524 1.325355 ATGCAGCAACAGCTTGAGTT 58.675 45.000 0.00 0.00 36.19 3.01
522 525 0.664761 TGCAGCAACAGCTTGAGTTC 59.335 50.000 0.00 0.00 36.19 3.01
523 526 0.664761 GCAGCAACAGCTTGAGTTCA 59.335 50.000 0.00 0.00 36.19 3.18
524 527 1.334779 GCAGCAACAGCTTGAGTTCAG 60.335 52.381 0.00 0.00 36.19 3.02
525 528 2.216046 CAGCAACAGCTTGAGTTCAGA 58.784 47.619 0.00 0.00 36.19 3.27
526 529 2.615447 CAGCAACAGCTTGAGTTCAGAA 59.385 45.455 0.00 0.00 36.19 3.02
527 530 3.252701 CAGCAACAGCTTGAGTTCAGAAT 59.747 43.478 0.00 0.00 36.19 2.40
528 531 3.887716 AGCAACAGCTTGAGTTCAGAATT 59.112 39.130 0.00 0.00 34.18 2.17
529 532 5.049198 CAGCAACAGCTTGAGTTCAGAATTA 60.049 40.000 0.00 0.00 36.19 1.40
530 533 5.709164 AGCAACAGCTTGAGTTCAGAATTAT 59.291 36.000 0.00 0.00 34.18 1.28
531 534 6.881065 AGCAACAGCTTGAGTTCAGAATTATA 59.119 34.615 0.00 0.00 34.18 0.98
532 535 7.555554 AGCAACAGCTTGAGTTCAGAATTATAT 59.444 33.333 0.00 0.00 34.18 0.86
533 536 8.830580 GCAACAGCTTGAGTTCAGAATTATATA 58.169 33.333 0.00 0.00 0.00 0.86
542 545 9.987272 TGAGTTCAGAATTATATATGTGTCTGG 57.013 33.333 15.67 4.42 34.57 3.86
543 546 8.839310 AGTTCAGAATTATATATGTGTCTGGC 57.161 34.615 15.67 11.40 34.57 4.85
544 547 7.880195 AGTTCAGAATTATATATGTGTCTGGCC 59.120 37.037 15.67 0.00 34.57 5.36
545 548 7.559335 TCAGAATTATATATGTGTCTGGCCT 57.441 36.000 3.32 0.00 34.57 5.19
546 549 8.664669 TCAGAATTATATATGTGTCTGGCCTA 57.335 34.615 3.32 0.00 34.57 3.93
547 550 8.531982 TCAGAATTATATATGTGTCTGGCCTAC 58.468 37.037 3.32 2.62 34.57 3.18
548 551 8.535335 CAGAATTATATATGTGTCTGGCCTACT 58.465 37.037 3.32 0.00 31.02 2.57
549 552 8.754080 AGAATTATATATGTGTCTGGCCTACTC 58.246 37.037 3.32 4.09 0.00 2.59
550 553 8.435931 AATTATATATGTGTCTGGCCTACTCA 57.564 34.615 3.32 10.05 0.00 3.41
551 554 5.730296 ATATATGTGTCTGGCCTACTCAC 57.270 43.478 3.32 8.98 0.00 3.51
552 555 0.532573 ATGTGTCTGGCCTACTCACG 59.467 55.000 3.32 0.00 32.55 4.35
553 556 1.215647 GTGTCTGGCCTACTCACGG 59.784 63.158 3.32 0.00 0.00 4.94
554 557 1.076014 TGTCTGGCCTACTCACGGA 59.924 57.895 3.32 0.00 0.00 4.69
555 558 0.541063 TGTCTGGCCTACTCACGGAA 60.541 55.000 3.32 0.00 0.00 4.30
556 559 0.824759 GTCTGGCCTACTCACGGAAT 59.175 55.000 3.32 0.00 0.00 3.01
557 560 1.207329 GTCTGGCCTACTCACGGAATT 59.793 52.381 3.32 0.00 0.00 2.17
558 561 1.207089 TCTGGCCTACTCACGGAATTG 59.793 52.381 3.32 0.00 0.00 2.32
559 562 0.981183 TGGCCTACTCACGGAATTGT 59.019 50.000 3.32 0.00 0.00 2.71
560 563 1.349688 TGGCCTACTCACGGAATTGTT 59.650 47.619 3.32 0.00 0.00 2.83
561 564 2.007608 GGCCTACTCACGGAATTGTTC 58.992 52.381 0.00 0.00 0.00 3.18
562 565 2.007608 GCCTACTCACGGAATTGTTCC 58.992 52.381 0.00 0.00 46.62 3.62
572 575 1.936547 GGAATTGTTCCTCTAGCTGCG 59.063 52.381 0.00 0.00 46.57 5.18
573 576 1.328986 GAATTGTTCCTCTAGCTGCGC 59.671 52.381 0.00 0.00 0.00 6.09
574 577 0.250234 ATTGTTCCTCTAGCTGCGCA 59.750 50.000 10.98 10.98 0.00 6.09
575 578 0.034756 TTGTTCCTCTAGCTGCGCAA 59.965 50.000 13.05 0.00 0.00 4.85
576 579 0.034756 TGTTCCTCTAGCTGCGCAAA 59.965 50.000 13.05 0.00 0.00 3.68
577 580 1.156736 GTTCCTCTAGCTGCGCAAAA 58.843 50.000 13.05 0.00 0.00 2.44
578 581 1.129437 GTTCCTCTAGCTGCGCAAAAG 59.871 52.381 13.05 9.32 0.00 2.27
579 582 0.391661 TCCTCTAGCTGCGCAAAAGG 60.392 55.000 13.05 13.60 0.00 3.11
580 583 0.391661 CCTCTAGCTGCGCAAAAGGA 60.392 55.000 13.05 7.07 0.00 3.36
581 584 1.661341 CTCTAGCTGCGCAAAAGGAT 58.339 50.000 13.05 0.00 0.00 3.24
582 585 2.012673 CTCTAGCTGCGCAAAAGGATT 58.987 47.619 13.05 0.00 0.00 3.01
583 586 3.198068 CTCTAGCTGCGCAAAAGGATTA 58.802 45.455 13.05 0.00 0.00 1.75
584 587 3.198068 TCTAGCTGCGCAAAAGGATTAG 58.802 45.455 13.05 5.87 0.00 1.73
585 588 1.826385 AGCTGCGCAAAAGGATTAGT 58.174 45.000 13.05 0.00 0.00 2.24
586 589 2.985896 AGCTGCGCAAAAGGATTAGTA 58.014 42.857 13.05 0.00 0.00 1.82
587 590 3.343617 AGCTGCGCAAAAGGATTAGTAA 58.656 40.909 13.05 0.00 0.00 2.24
588 591 3.947834 AGCTGCGCAAAAGGATTAGTAAT 59.052 39.130 13.05 0.00 0.00 1.89
589 592 4.399303 AGCTGCGCAAAAGGATTAGTAATT 59.601 37.500 13.05 0.00 0.00 1.40
590 593 5.102313 GCTGCGCAAAAGGATTAGTAATTT 58.898 37.500 13.05 0.00 0.00 1.82
591 594 5.230097 GCTGCGCAAAAGGATTAGTAATTTC 59.770 40.000 13.05 0.00 0.00 2.17
592 595 5.328691 TGCGCAAAAGGATTAGTAATTTCG 58.671 37.500 8.16 0.00 0.00 3.46
593 596 4.733405 GCGCAAAAGGATTAGTAATTTCGG 59.267 41.667 0.30 0.00 0.00 4.30
594 597 5.448089 GCGCAAAAGGATTAGTAATTTCGGA 60.448 40.000 0.30 0.00 0.00 4.55
595 598 6.725246 CGCAAAAGGATTAGTAATTTCGGAT 58.275 36.000 0.00 0.00 0.00 4.18
596 599 6.851330 CGCAAAAGGATTAGTAATTTCGGATC 59.149 38.462 0.00 0.00 0.00 3.36
597 600 7.466725 CGCAAAAGGATTAGTAATTTCGGATCA 60.467 37.037 0.00 0.00 0.00 2.92
598 601 8.188139 GCAAAAGGATTAGTAATTTCGGATCAA 58.812 33.333 0.00 0.00 0.00 2.57
611 614 8.631480 AATTTCGGATCAATTAGTTATACCCC 57.369 34.615 0.00 0.00 0.00 4.95
612 615 7.383156 TTTCGGATCAATTAGTTATACCCCT 57.617 36.000 0.00 0.00 0.00 4.79
613 616 6.600882 TCGGATCAATTAGTTATACCCCTC 57.399 41.667 0.00 0.00 0.00 4.30
614 617 5.482878 TCGGATCAATTAGTTATACCCCTCC 59.517 44.000 0.00 0.00 0.00 4.30
615 618 5.484290 CGGATCAATTAGTTATACCCCTCCT 59.516 44.000 0.00 0.00 0.00 3.69
616 619 6.013639 CGGATCAATTAGTTATACCCCTCCTT 60.014 42.308 0.00 0.00 0.00 3.36
617 620 7.474364 CGGATCAATTAGTTATACCCCTCCTTT 60.474 40.741 0.00 0.00 0.00 3.11
618 621 7.883833 GGATCAATTAGTTATACCCCTCCTTTC 59.116 40.741 0.00 0.00 0.00 2.62
619 622 7.145474 TCAATTAGTTATACCCCTCCTTTCC 57.855 40.000 0.00 0.00 0.00 3.13
620 623 6.679303 TCAATTAGTTATACCCCTCCTTTCCA 59.321 38.462 0.00 0.00 0.00 3.53
621 624 7.352522 TCAATTAGTTATACCCCTCCTTTCCAT 59.647 37.037 0.00 0.00 0.00 3.41
622 625 6.509523 TTAGTTATACCCCTCCTTTCCATG 57.490 41.667 0.00 0.00 0.00 3.66
623 626 3.138468 AGTTATACCCCTCCTTTCCATGC 59.862 47.826 0.00 0.00 0.00 4.06
624 627 1.607225 ATACCCCTCCTTTCCATGCA 58.393 50.000 0.00 0.00 0.00 3.96
625 628 0.623723 TACCCCTCCTTTCCATGCAC 59.376 55.000 0.00 0.00 0.00 4.57
626 629 1.383799 CCCCTCCTTTCCATGCACA 59.616 57.895 0.00 0.00 0.00 4.57
1143 1148 6.072175 GGTTTAGGAAATTTGGGGATTTTTGC 60.072 38.462 0.00 0.00 29.75 3.68
1172 1177 5.897250 AGGTGGTCTTTGTTGTTAGGATTTT 59.103 36.000 0.00 0.00 0.00 1.82
1218 1223 4.005650 CTCTGCACATGATGGTAACTTGT 58.994 43.478 0.00 0.00 37.61 3.16
1983 1992 7.652105 TGAACTAACTGTTGCTTAGTACTCTTG 59.348 37.037 0.00 0.00 39.30 3.02
2490 2613 5.163301 GGAATTGTTGAGTGAGGCTAGGATA 60.163 44.000 0.00 0.00 0.00 2.59
2668 2791 0.901124 GGCAGAGGAGAAGCTGAAGA 59.099 55.000 0.00 0.00 34.06 2.87
3203 3428 0.475044 TGCCTTTAGGTGGTTCCGTT 59.525 50.000 0.00 0.00 41.99 4.44
3438 3916 3.525800 AGTGGATGCCTTTAGGTGTTT 57.474 42.857 0.00 0.00 37.57 2.83
3439 3917 3.421844 AGTGGATGCCTTTAGGTGTTTC 58.578 45.455 0.00 0.00 37.57 2.78
3440 3918 2.492088 GTGGATGCCTTTAGGTGTTTCC 59.508 50.000 0.00 0.68 37.57 3.13
3441 3919 1.743394 GGATGCCTTTAGGTGTTTCCG 59.257 52.381 0.00 0.00 41.99 4.30
3442 3920 2.433436 GATGCCTTTAGGTGTTTCCGT 58.567 47.619 0.00 0.00 41.99 4.69
3443 3921 1.886886 TGCCTTTAGGTGTTTCCGTC 58.113 50.000 0.00 0.00 41.99 4.79
3444 3922 0.794473 GCCTTTAGGTGTTTCCGTCG 59.206 55.000 0.00 0.00 41.99 5.12
3445 3923 1.875157 GCCTTTAGGTGTTTCCGTCGT 60.875 52.381 0.00 0.00 41.99 4.34
3446 3924 2.064014 CCTTTAGGTGTTTCCGTCGTC 58.936 52.381 0.00 0.00 41.99 4.20
3447 3925 2.064014 CTTTAGGTGTTTCCGTCGTCC 58.936 52.381 0.00 0.00 41.99 4.79
3448 3926 0.318120 TTAGGTGTTTCCGTCGTCCC 59.682 55.000 0.00 0.00 41.99 4.46
3449 3927 1.535204 TAGGTGTTTCCGTCGTCCCC 61.535 60.000 0.00 0.00 41.99 4.81
3450 3928 2.735857 GTGTTTCCGTCGTCCCCG 60.736 66.667 0.00 0.00 0.00 5.73
3451 3929 2.911509 TGTTTCCGTCGTCCCCGA 60.912 61.111 0.00 0.00 41.73 5.14
3452 3930 2.126189 GTTTCCGTCGTCCCCGAG 60.126 66.667 0.00 0.00 45.26 4.63
3453 3931 4.060038 TTTCCGTCGTCCCCGAGC 62.060 66.667 0.00 0.00 45.26 5.03
3461 3939 3.155167 GTCCCCGAGCCACCCTAG 61.155 72.222 0.00 0.00 0.00 3.02
3462 3940 3.352748 TCCCCGAGCCACCCTAGA 61.353 66.667 0.00 0.00 0.00 2.43
3463 3941 3.155167 CCCCGAGCCACCCTAGAC 61.155 72.222 0.00 0.00 0.00 2.59
3464 3942 3.155167 CCCGAGCCACCCTAGACC 61.155 72.222 0.00 0.00 0.00 3.85
3465 3943 3.155167 CCGAGCCACCCTAGACCC 61.155 72.222 0.00 0.00 0.00 4.46
3466 3944 2.042843 CGAGCCACCCTAGACCCT 60.043 66.667 0.00 0.00 0.00 4.34
3467 3945 1.229359 CGAGCCACCCTAGACCCTA 59.771 63.158 0.00 0.00 0.00 3.53
3468 3946 0.824182 CGAGCCACCCTAGACCCTAG 60.824 65.000 0.00 0.00 0.00 3.02
3469 3947 0.262285 GAGCCACCCTAGACCCTAGT 59.738 60.000 0.00 0.00 0.00 2.57
3470 3948 0.717196 AGCCACCCTAGACCCTAGTT 59.283 55.000 0.00 0.00 0.00 2.24
3471 3949 0.831307 GCCACCCTAGACCCTAGTTG 59.169 60.000 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 66 7.400599 AAACACGGTAACTCTATCAGTCATA 57.599 36.000 0.00 0.00 32.30 2.15
64 67 5.916661 AACACGGTAACTCTATCAGTCAT 57.083 39.130 0.00 0.00 32.30 3.06
65 68 5.618418 CGAAACACGGTAACTCTATCAGTCA 60.618 44.000 0.00 0.00 38.46 3.41
66 69 4.792189 CGAAACACGGTAACTCTATCAGTC 59.208 45.833 0.00 0.00 38.46 3.51
67 70 4.730657 CGAAACACGGTAACTCTATCAGT 58.269 43.478 0.00 0.00 38.46 3.41
68 71 3.546670 GCGAAACACGGTAACTCTATCAG 59.453 47.826 0.00 0.00 42.83 2.90
69 72 3.057386 TGCGAAACACGGTAACTCTATCA 60.057 43.478 0.00 0.00 42.83 2.15
70 73 3.504863 TGCGAAACACGGTAACTCTATC 58.495 45.455 0.00 0.00 42.83 2.08
71 74 3.581024 TGCGAAACACGGTAACTCTAT 57.419 42.857 0.00 0.00 42.83 1.98
72 75 3.367992 TTGCGAAACACGGTAACTCTA 57.632 42.857 0.00 0.00 42.83 2.43
73 76 2.228138 TTGCGAAACACGGTAACTCT 57.772 45.000 0.00 0.00 42.83 3.24
74 77 2.477375 TGATTGCGAAACACGGTAACTC 59.523 45.455 0.00 0.00 42.83 3.01
75 78 2.485903 TGATTGCGAAACACGGTAACT 58.514 42.857 0.00 0.00 42.83 2.24
76 79 2.953640 TGATTGCGAAACACGGTAAC 57.046 45.000 0.00 0.00 42.83 2.50
77 80 3.371591 GGTATGATTGCGAAACACGGTAA 59.628 43.478 0.00 0.00 42.83 2.85
78 81 2.931325 GGTATGATTGCGAAACACGGTA 59.069 45.455 0.00 0.00 42.83 4.02
79 82 1.735571 GGTATGATTGCGAAACACGGT 59.264 47.619 0.00 0.00 42.83 4.83
80 83 2.006888 AGGTATGATTGCGAAACACGG 58.993 47.619 0.00 0.00 42.83 4.94
81 84 3.740044 AAGGTATGATTGCGAAACACG 57.260 42.857 0.00 0.00 45.66 4.49
82 85 9.382244 GATATTTAAGGTATGATTGCGAAACAC 57.618 33.333 0.00 0.00 0.00 3.32
83 86 9.337396 AGATATTTAAGGTATGATTGCGAAACA 57.663 29.630 0.00 0.00 0.00 2.83
86 89 9.554395 TGAAGATATTTAAGGTATGATTGCGAA 57.446 29.630 0.00 0.00 0.00 4.70
87 90 9.554395 TTGAAGATATTTAAGGTATGATTGCGA 57.446 29.630 0.00 0.00 0.00 5.10
106 109 9.631257 TGGACACATGAATATTACATTGAAGAT 57.369 29.630 0.00 0.00 0.00 2.40
107 110 9.631257 ATGGACACATGAATATTACATTGAAGA 57.369 29.630 0.00 0.00 35.57 2.87
131 134 4.970711 AGATACTTTGGAGCCATCTCATG 58.029 43.478 0.00 0.00 41.13 3.07
132 135 4.041444 GGAGATACTTTGGAGCCATCTCAT 59.959 45.833 15.27 0.00 41.78 2.90
133 136 3.389329 GGAGATACTTTGGAGCCATCTCA 59.611 47.826 15.27 0.00 41.78 3.27
134 137 3.389329 TGGAGATACTTTGGAGCCATCTC 59.611 47.826 8.04 8.04 40.58 2.75
135 138 3.387962 TGGAGATACTTTGGAGCCATCT 58.612 45.455 0.00 0.00 33.17 2.90
136 139 3.495806 CCTGGAGATACTTTGGAGCCATC 60.496 52.174 0.00 0.00 0.00 3.51
137 140 2.441001 CCTGGAGATACTTTGGAGCCAT 59.559 50.000 0.00 0.00 0.00 4.40
138 141 1.839994 CCTGGAGATACTTTGGAGCCA 59.160 52.381 0.00 0.00 0.00 4.75
139 142 2.103941 CTCCTGGAGATACTTTGGAGCC 59.896 54.545 19.13 0.00 35.35 4.70
140 143 2.769095 ACTCCTGGAGATACTTTGGAGC 59.231 50.000 29.71 0.00 43.34 4.70
141 144 6.739331 ATTACTCCTGGAGATACTTTGGAG 57.261 41.667 29.71 0.00 44.61 3.86
142 145 7.363031 ACTATTACTCCTGGAGATACTTTGGA 58.637 38.462 29.71 5.20 33.32 3.53
143 146 7.604657 ACTATTACTCCTGGAGATACTTTGG 57.395 40.000 29.71 13.04 33.32 3.28
144 147 8.301002 GCTACTATTACTCCTGGAGATACTTTG 58.699 40.741 29.71 14.38 33.32 2.77
145 148 7.452189 GGCTACTATTACTCCTGGAGATACTTT 59.548 40.741 29.71 9.02 33.32 2.66
146 149 6.949463 GGCTACTATTACTCCTGGAGATACTT 59.051 42.308 29.71 9.77 33.32 2.24
147 150 6.045695 TGGCTACTATTACTCCTGGAGATACT 59.954 42.308 29.71 10.15 33.32 2.12
148 151 6.246919 TGGCTACTATTACTCCTGGAGATAC 58.753 44.000 29.71 6.49 33.32 2.24
149 152 6.464530 TGGCTACTATTACTCCTGGAGATA 57.535 41.667 29.71 16.15 33.32 1.98
150 153 5.340891 TGGCTACTATTACTCCTGGAGAT 57.659 43.478 29.71 15.88 33.32 2.75
151 154 4.808767 TGGCTACTATTACTCCTGGAGA 57.191 45.455 29.71 9.21 33.32 3.71
152 155 4.896482 ACTTGGCTACTATTACTCCTGGAG 59.104 45.833 22.00 22.00 35.52 3.86
153 156 4.880164 ACTTGGCTACTATTACTCCTGGA 58.120 43.478 0.00 0.00 0.00 3.86
154 157 5.615925 AACTTGGCTACTATTACTCCTGG 57.384 43.478 0.00 0.00 0.00 4.45
155 158 7.553334 TGTAAACTTGGCTACTATTACTCCTG 58.447 38.462 0.00 0.00 0.00 3.86
156 159 7.147707 CCTGTAAACTTGGCTACTATTACTCCT 60.148 40.741 0.00 0.00 0.00 3.69
157 160 6.985059 CCTGTAAACTTGGCTACTATTACTCC 59.015 42.308 0.00 0.00 0.00 3.85
158 161 7.554211 ACCTGTAAACTTGGCTACTATTACTC 58.446 38.462 0.00 0.00 0.00 2.59
159 162 7.492077 ACCTGTAAACTTGGCTACTATTACT 57.508 36.000 0.00 0.00 0.00 2.24
160 163 8.253113 TGTACCTGTAAACTTGGCTACTATTAC 58.747 37.037 0.00 0.00 0.00 1.89
161 164 8.365060 TGTACCTGTAAACTTGGCTACTATTA 57.635 34.615 0.00 0.00 0.00 0.98
162 165 7.248743 TGTACCTGTAAACTTGGCTACTATT 57.751 36.000 0.00 0.00 0.00 1.73
163 166 6.862469 TGTACCTGTAAACTTGGCTACTAT 57.138 37.500 0.00 0.00 0.00 2.12
164 167 6.669125 TTGTACCTGTAAACTTGGCTACTA 57.331 37.500 0.00 0.00 0.00 1.82
165 168 5.556006 TTGTACCTGTAAACTTGGCTACT 57.444 39.130 0.00 0.00 0.00 2.57
166 169 5.334646 GCTTTGTACCTGTAAACTTGGCTAC 60.335 44.000 0.00 0.00 0.00 3.58
167 170 4.758165 GCTTTGTACCTGTAAACTTGGCTA 59.242 41.667 0.00 0.00 0.00 3.93
168 171 3.568430 GCTTTGTACCTGTAAACTTGGCT 59.432 43.478 0.00 0.00 0.00 4.75
169 172 3.305131 GGCTTTGTACCTGTAAACTTGGC 60.305 47.826 0.00 0.00 0.00 4.52
170 173 3.058501 CGGCTTTGTACCTGTAAACTTGG 60.059 47.826 0.00 0.00 0.00 3.61
171 174 3.562557 ACGGCTTTGTACCTGTAAACTTG 59.437 43.478 0.00 0.00 0.00 3.16
172 175 3.811497 GACGGCTTTGTACCTGTAAACTT 59.189 43.478 0.00 0.00 0.00 2.66
173 176 3.181463 TGACGGCTTTGTACCTGTAAACT 60.181 43.478 0.00 0.00 0.00 2.66
174 177 3.059393 GTGACGGCTTTGTACCTGTAAAC 60.059 47.826 0.00 0.00 0.00 2.01
175 178 3.132925 GTGACGGCTTTGTACCTGTAAA 58.867 45.455 0.00 0.00 0.00 2.01
176 179 2.102757 TGTGACGGCTTTGTACCTGTAA 59.897 45.455 0.00 0.00 0.00 2.41
177 180 1.687660 TGTGACGGCTTTGTACCTGTA 59.312 47.619 0.00 0.00 0.00 2.74
178 181 0.466543 TGTGACGGCTTTGTACCTGT 59.533 50.000 0.00 0.00 0.00 4.00
179 182 1.588674 TTGTGACGGCTTTGTACCTG 58.411 50.000 0.00 0.00 0.00 4.00
180 183 2.423577 GATTGTGACGGCTTTGTACCT 58.576 47.619 0.00 0.00 0.00 3.08
181 184 1.467342 GGATTGTGACGGCTTTGTACC 59.533 52.381 0.00 0.00 0.00 3.34
182 185 2.147958 TGGATTGTGACGGCTTTGTAC 58.852 47.619 0.00 0.00 0.00 2.90
183 186 2.552599 TGGATTGTGACGGCTTTGTA 57.447 45.000 0.00 0.00 0.00 2.41
184 187 1.608590 CTTGGATTGTGACGGCTTTGT 59.391 47.619 0.00 0.00 0.00 2.83
185 188 1.608590 ACTTGGATTGTGACGGCTTTG 59.391 47.619 0.00 0.00 0.00 2.77
186 189 1.981256 ACTTGGATTGTGACGGCTTT 58.019 45.000 0.00 0.00 0.00 3.51
187 190 1.981256 AACTTGGATTGTGACGGCTT 58.019 45.000 0.00 0.00 0.00 4.35
188 191 2.301870 TCTAACTTGGATTGTGACGGCT 59.698 45.455 0.00 0.00 0.00 5.52
189 192 2.695359 TCTAACTTGGATTGTGACGGC 58.305 47.619 0.00 0.00 0.00 5.68
190 193 4.062293 TGTTCTAACTTGGATTGTGACGG 58.938 43.478 0.00 0.00 0.00 4.79
191 194 5.163854 GGATGTTCTAACTTGGATTGTGACG 60.164 44.000 0.00 0.00 0.00 4.35
192 195 5.705441 TGGATGTTCTAACTTGGATTGTGAC 59.295 40.000 0.00 0.00 0.00 3.67
193 196 5.875224 TGGATGTTCTAACTTGGATTGTGA 58.125 37.500 0.00 0.00 0.00 3.58
194 197 6.764308 ATGGATGTTCTAACTTGGATTGTG 57.236 37.500 0.00 0.00 0.00 3.33
195 198 7.177878 AGAATGGATGTTCTAACTTGGATTGT 58.822 34.615 0.00 0.00 36.71 2.71
196 199 7.636150 AGAATGGATGTTCTAACTTGGATTG 57.364 36.000 0.00 0.00 36.71 2.67
197 200 7.340487 GGAAGAATGGATGTTCTAACTTGGATT 59.660 37.037 0.00 0.00 37.46 3.01
198 201 6.830838 GGAAGAATGGATGTTCTAACTTGGAT 59.169 38.462 0.00 0.00 37.46 3.41
199 202 6.012508 AGGAAGAATGGATGTTCTAACTTGGA 60.013 38.462 0.00 0.00 37.46 3.53
200 203 6.183347 AGGAAGAATGGATGTTCTAACTTGG 58.817 40.000 0.00 0.00 37.46 3.61
201 204 8.970859 ATAGGAAGAATGGATGTTCTAACTTG 57.029 34.615 0.00 0.00 37.46 3.16
202 205 8.772250 TGATAGGAAGAATGGATGTTCTAACTT 58.228 33.333 0.00 0.00 37.46 2.66
203 206 8.324191 TGATAGGAAGAATGGATGTTCTAACT 57.676 34.615 0.00 0.00 37.46 2.24
204 207 8.207545 ACTGATAGGAAGAATGGATGTTCTAAC 58.792 37.037 0.00 0.00 37.46 2.34
205 208 8.324191 ACTGATAGGAAGAATGGATGTTCTAA 57.676 34.615 0.00 0.00 37.46 2.10
206 209 7.786943 AGACTGATAGGAAGAATGGATGTTCTA 59.213 37.037 0.00 0.00 37.46 2.10
207 210 6.614906 AGACTGATAGGAAGAATGGATGTTCT 59.385 38.462 0.00 0.00 40.05 3.01
208 211 6.825610 AGACTGATAGGAAGAATGGATGTTC 58.174 40.000 0.00 0.00 0.00 3.18
209 212 6.821616 AGACTGATAGGAAGAATGGATGTT 57.178 37.500 0.00 0.00 0.00 2.71
210 213 6.614906 AGAAGACTGATAGGAAGAATGGATGT 59.385 38.462 0.00 0.00 0.00 3.06
211 214 6.930164 CAGAAGACTGATAGGAAGAATGGATG 59.070 42.308 0.00 0.00 46.03 3.51
212 215 6.614906 ACAGAAGACTGATAGGAAGAATGGAT 59.385 38.462 0.00 0.00 46.03 3.41
213 216 5.960811 ACAGAAGACTGATAGGAAGAATGGA 59.039 40.000 0.00 0.00 46.03 3.41
214 217 6.232581 ACAGAAGACTGATAGGAAGAATGG 57.767 41.667 0.00 0.00 46.03 3.16
215 218 7.326454 TGAACAGAAGACTGATAGGAAGAATG 58.674 38.462 0.00 0.00 46.03 2.67
216 219 7.487822 TGAACAGAAGACTGATAGGAAGAAT 57.512 36.000 0.00 0.00 46.03 2.40
217 220 6.918067 TGAACAGAAGACTGATAGGAAGAA 57.082 37.500 0.00 0.00 46.03 2.52
218 221 6.918067 TTGAACAGAAGACTGATAGGAAGA 57.082 37.500 0.00 0.00 46.03 2.87
219 222 8.558973 AATTTGAACAGAAGACTGATAGGAAG 57.441 34.615 0.00 0.00 46.03 3.46
226 229 9.567848 GTGTTTTTAATTTGAACAGAAGACTGA 57.432 29.630 0.00 0.00 46.03 3.41
254 257 9.844790 CTGCATTTAACTGATATGTTCTTGAAA 57.155 29.630 0.00 0.00 0.00 2.69
255 258 9.013229 ACTGCATTTAACTGATATGTTCTTGAA 57.987 29.630 0.00 0.00 0.00 2.69
256 259 8.565896 ACTGCATTTAACTGATATGTTCTTGA 57.434 30.769 0.00 0.00 0.00 3.02
257 260 8.671921 AGACTGCATTTAACTGATATGTTCTTG 58.328 33.333 0.00 0.00 0.00 3.02
258 261 8.798859 AGACTGCATTTAACTGATATGTTCTT 57.201 30.769 0.00 0.00 0.00 2.52
259 262 8.798859 AAGACTGCATTTAACTGATATGTTCT 57.201 30.769 0.00 0.00 0.00 3.01
260 263 7.848051 CGAAGACTGCATTTAACTGATATGTTC 59.152 37.037 0.00 0.00 0.00 3.18
261 264 7.334421 ACGAAGACTGCATTTAACTGATATGTT 59.666 33.333 0.00 0.00 0.00 2.71
262 265 6.818644 ACGAAGACTGCATTTAACTGATATGT 59.181 34.615 0.00 0.00 0.00 2.29
263 266 7.239166 ACGAAGACTGCATTTAACTGATATG 57.761 36.000 0.00 0.00 0.00 1.78
264 267 9.547753 AATACGAAGACTGCATTTAACTGATAT 57.452 29.630 0.00 0.00 0.00 1.63
265 268 8.942338 AATACGAAGACTGCATTTAACTGATA 57.058 30.769 0.00 0.00 0.00 2.15
266 269 7.849804 AATACGAAGACTGCATTTAACTGAT 57.150 32.000 0.00 0.00 0.00 2.90
267 270 8.817100 CATAATACGAAGACTGCATTTAACTGA 58.183 33.333 0.00 0.00 0.00 3.41
268 271 8.817100 TCATAATACGAAGACTGCATTTAACTG 58.183 33.333 0.00 0.00 0.00 3.16
269 272 8.942338 TCATAATACGAAGACTGCATTTAACT 57.058 30.769 0.00 0.00 0.00 2.24
270 273 9.982291 TTTCATAATACGAAGACTGCATTTAAC 57.018 29.630 0.00 0.00 0.00 2.01
273 276 8.892723 TCATTTCATAATACGAAGACTGCATTT 58.107 29.630 0.00 0.00 0.00 2.32
274 277 8.437360 TCATTTCATAATACGAAGACTGCATT 57.563 30.769 0.00 0.00 0.00 3.56
275 278 8.437360 TTCATTTCATAATACGAAGACTGCAT 57.563 30.769 0.00 0.00 0.00 3.96
276 279 7.841915 TTCATTTCATAATACGAAGACTGCA 57.158 32.000 0.00 0.00 0.00 4.41
277 280 9.722056 AATTTCATTTCATAATACGAAGACTGC 57.278 29.630 0.00 0.00 0.00 4.40
300 303 9.734620 CGGTATGATGTGATCAATTTACAAATT 57.265 29.630 0.00 0.00 43.50 1.82
301 304 8.902806 ACGGTATGATGTGATCAATTTACAAAT 58.097 29.630 0.00 0.00 43.50 2.32
302 305 8.275015 ACGGTATGATGTGATCAATTTACAAA 57.725 30.769 0.00 0.00 43.50 2.83
303 306 7.011950 GGACGGTATGATGTGATCAATTTACAA 59.988 37.037 0.00 0.00 43.50 2.41
304 307 6.481976 GGACGGTATGATGTGATCAATTTACA 59.518 38.462 0.00 0.00 43.50 2.41
305 308 6.481976 TGGACGGTATGATGTGATCAATTTAC 59.518 38.462 0.00 0.00 43.50 2.01
306 309 6.587273 TGGACGGTATGATGTGATCAATTTA 58.413 36.000 0.00 0.00 43.50 1.40
307 310 5.436175 TGGACGGTATGATGTGATCAATTT 58.564 37.500 0.00 0.00 43.50 1.82
308 311 5.034852 TGGACGGTATGATGTGATCAATT 57.965 39.130 0.00 0.00 43.50 2.32
309 312 4.101585 ACTGGACGGTATGATGTGATCAAT 59.898 41.667 0.00 0.00 43.50 2.57
310 313 3.450817 ACTGGACGGTATGATGTGATCAA 59.549 43.478 0.00 0.00 43.50 2.57
311 314 3.031013 ACTGGACGGTATGATGTGATCA 58.969 45.455 0.00 0.00 44.55 2.92
312 315 3.735237 ACTGGACGGTATGATGTGATC 57.265 47.619 0.00 0.00 0.00 2.92
313 316 5.106277 CGTATACTGGACGGTATGATGTGAT 60.106 44.000 12.81 0.00 36.66 3.06
314 317 4.214758 CGTATACTGGACGGTATGATGTGA 59.785 45.833 12.81 0.00 36.66 3.58
315 318 4.214758 TCGTATACTGGACGGTATGATGTG 59.785 45.833 12.81 0.83 40.70 3.21
316 319 4.392047 TCGTATACTGGACGGTATGATGT 58.608 43.478 12.81 0.00 40.70 3.06
317 320 5.180680 TCTTCGTATACTGGACGGTATGATG 59.819 44.000 12.81 6.26 40.70 3.07
318 321 5.311265 TCTTCGTATACTGGACGGTATGAT 58.689 41.667 12.81 0.00 40.70 2.45
319 322 4.707105 TCTTCGTATACTGGACGGTATGA 58.293 43.478 12.81 1.68 40.70 2.15
320 323 5.428496 TTCTTCGTATACTGGACGGTATG 57.572 43.478 12.81 0.00 40.70 2.39
321 324 6.040166 ACATTTCTTCGTATACTGGACGGTAT 59.960 38.462 8.68 8.68 40.70 2.73
322 325 5.357878 ACATTTCTTCGTATACTGGACGGTA 59.642 40.000 0.56 0.00 40.70 4.02
323 326 4.159135 ACATTTCTTCGTATACTGGACGGT 59.841 41.667 0.56 0.00 40.70 4.83
324 327 4.503007 CACATTTCTTCGTATACTGGACGG 59.497 45.833 0.56 0.00 40.70 4.79
325 328 5.100259 ACACATTTCTTCGTATACTGGACG 58.900 41.667 0.56 0.00 41.69 4.79
326 329 6.963049 AACACATTTCTTCGTATACTGGAC 57.037 37.500 0.56 0.00 0.00 4.02
327 330 7.572353 GCAAAACACATTTCTTCGTATACTGGA 60.572 37.037 0.56 0.00 0.00 3.86
328 331 6.523201 GCAAAACACATTTCTTCGTATACTGG 59.477 38.462 0.56 0.00 0.00 4.00
329 332 7.298122 AGCAAAACACATTTCTTCGTATACTG 58.702 34.615 0.56 0.00 0.00 2.74
330 333 7.435068 AGCAAAACACATTTCTTCGTATACT 57.565 32.000 0.56 0.00 0.00 2.12
331 334 9.422196 GATAGCAAAACACATTTCTTCGTATAC 57.578 33.333 0.00 0.00 0.00 1.47
332 335 9.157104 TGATAGCAAAACACATTTCTTCGTATA 57.843 29.630 0.00 0.00 0.00 1.47
333 336 7.962918 GTGATAGCAAAACACATTTCTTCGTAT 59.037 33.333 0.00 0.00 35.06 3.06
334 337 7.295201 GTGATAGCAAAACACATTTCTTCGTA 58.705 34.615 0.00 0.00 35.06 3.43
335 338 6.142817 GTGATAGCAAAACACATTTCTTCGT 58.857 36.000 0.00 0.00 35.06 3.85
336 339 5.569059 GGTGATAGCAAAACACATTTCTTCG 59.431 40.000 0.00 0.00 36.42 3.79
337 340 6.446318 TGGTGATAGCAAAACACATTTCTTC 58.554 36.000 0.00 0.00 36.42 2.87
338 341 6.403866 TGGTGATAGCAAAACACATTTCTT 57.596 33.333 0.00 0.00 36.42 2.52
339 342 6.594788 ATGGTGATAGCAAAACACATTTCT 57.405 33.333 0.00 0.00 36.42 2.52
340 343 9.669353 CTATATGGTGATAGCAAAACACATTTC 57.331 33.333 0.00 0.00 36.42 2.17
341 344 9.407380 TCTATATGGTGATAGCAAAACACATTT 57.593 29.630 0.00 0.00 36.42 2.32
342 345 8.978874 TCTATATGGTGATAGCAAAACACATT 57.021 30.769 0.00 0.00 36.42 2.71
343 346 9.224267 GATCTATATGGTGATAGCAAAACACAT 57.776 33.333 0.00 0.00 36.42 3.21
344 347 8.432013 AGATCTATATGGTGATAGCAAAACACA 58.568 33.333 0.00 0.00 36.42 3.72
345 348 8.715998 CAGATCTATATGGTGATAGCAAAACAC 58.284 37.037 0.00 0.00 30.65 3.32
346 349 7.879677 CCAGATCTATATGGTGATAGCAAAACA 59.120 37.037 0.00 0.00 34.54 2.83
347 350 8.097038 TCCAGATCTATATGGTGATAGCAAAAC 58.903 37.037 0.00 0.00 40.04 2.43
348 351 8.097038 GTCCAGATCTATATGGTGATAGCAAAA 58.903 37.037 0.00 0.00 40.04 2.44
349 352 7.310671 GGTCCAGATCTATATGGTGATAGCAAA 60.311 40.741 0.00 0.00 40.04 3.68
350 353 6.155221 GGTCCAGATCTATATGGTGATAGCAA 59.845 42.308 0.00 0.00 40.04 3.91
351 354 5.658634 GGTCCAGATCTATATGGTGATAGCA 59.341 44.000 0.00 0.00 40.04 3.49
352 355 5.658634 TGGTCCAGATCTATATGGTGATAGC 59.341 44.000 0.00 0.00 40.04 2.97
353 356 7.562821 TCATGGTCCAGATCTATATGGTGATAG 59.437 40.741 0.00 0.00 40.04 2.08
354 357 7.421684 TCATGGTCCAGATCTATATGGTGATA 58.578 38.462 0.00 0.00 40.04 2.15
355 358 6.266857 TCATGGTCCAGATCTATATGGTGAT 58.733 40.000 0.00 0.00 40.04 3.06
356 359 5.654370 TCATGGTCCAGATCTATATGGTGA 58.346 41.667 0.00 0.00 40.04 4.02
357 360 6.364568 TTCATGGTCCAGATCTATATGGTG 57.635 41.667 0.00 0.00 40.04 4.17
358 361 6.069789 CCATTCATGGTCCAGATCTATATGGT 60.070 42.308 0.00 0.00 43.05 3.55
359 362 6.354938 CCATTCATGGTCCAGATCTATATGG 58.645 44.000 0.00 0.00 43.05 2.74
360 363 6.069789 ACCCATTCATGGTCCAGATCTATATG 60.070 42.308 5.09 0.00 46.65 1.78
361 364 6.034659 ACCCATTCATGGTCCAGATCTATAT 58.965 40.000 5.09 0.00 46.65 0.86
362 365 5.415065 ACCCATTCATGGTCCAGATCTATA 58.585 41.667 5.09 0.00 46.65 1.31
363 366 4.246143 ACCCATTCATGGTCCAGATCTAT 58.754 43.478 5.09 0.00 46.65 1.98
364 367 3.648067 GACCCATTCATGGTCCAGATCTA 59.352 47.826 5.09 0.00 46.65 1.98
365 368 2.441001 GACCCATTCATGGTCCAGATCT 59.559 50.000 5.09 0.00 46.65 2.75
366 369 2.856222 GACCCATTCATGGTCCAGATC 58.144 52.381 5.09 0.00 46.65 2.75
373 376 1.885887 CGTTGTTGACCCATTCATGGT 59.114 47.619 5.09 0.00 46.65 3.55
375 378 3.641437 AACGTTGTTGACCCATTCATG 57.359 42.857 0.00 0.00 32.84 3.07
376 379 5.105917 GGATTAACGTTGTTGACCCATTCAT 60.106 40.000 11.99 0.00 32.84 2.57
377 380 4.216687 GGATTAACGTTGTTGACCCATTCA 59.783 41.667 11.99 0.00 0.00 2.57
378 381 4.216687 TGGATTAACGTTGTTGACCCATTC 59.783 41.667 11.99 0.00 0.00 2.67
379 382 4.145807 TGGATTAACGTTGTTGACCCATT 58.854 39.130 11.99 0.00 0.00 3.16
380 383 3.756434 CTGGATTAACGTTGTTGACCCAT 59.244 43.478 11.99 0.00 0.00 4.00
381 384 3.142951 CTGGATTAACGTTGTTGACCCA 58.857 45.455 11.99 8.49 0.00 4.51
382 385 3.187842 GTCTGGATTAACGTTGTTGACCC 59.812 47.826 11.99 4.24 0.00 4.46
383 386 3.187842 GGTCTGGATTAACGTTGTTGACC 59.812 47.826 11.99 14.63 35.39 4.02
384 387 3.810941 TGGTCTGGATTAACGTTGTTGAC 59.189 43.478 11.99 9.95 0.00 3.18
385 388 4.074627 TGGTCTGGATTAACGTTGTTGA 57.925 40.909 11.99 0.00 0.00 3.18
386 389 4.454161 TCATGGTCTGGATTAACGTTGTTG 59.546 41.667 11.99 0.00 0.00 3.33
387 390 4.647611 TCATGGTCTGGATTAACGTTGTT 58.352 39.130 11.99 0.00 0.00 2.83
388 391 4.280436 TCATGGTCTGGATTAACGTTGT 57.720 40.909 11.99 0.00 0.00 3.32
389 392 5.818136 ATTCATGGTCTGGATTAACGTTG 57.182 39.130 11.99 0.00 0.00 4.10
390 393 8.405531 CAAATATTCATGGTCTGGATTAACGTT 58.594 33.333 5.88 5.88 0.00 3.99
391 394 7.468631 GCAAATATTCATGGTCTGGATTAACGT 60.469 37.037 0.00 0.00 0.00 3.99
392 395 6.857964 GCAAATATTCATGGTCTGGATTAACG 59.142 38.462 0.00 0.00 0.00 3.18
393 396 7.147976 GGCAAATATTCATGGTCTGGATTAAC 58.852 38.462 0.00 0.00 0.00 2.01
394 397 6.016360 CGGCAAATATTCATGGTCTGGATTAA 60.016 38.462 0.00 0.00 0.00 1.40
395 398 5.473162 CGGCAAATATTCATGGTCTGGATTA 59.527 40.000 0.00 0.00 0.00 1.75
396 399 4.279169 CGGCAAATATTCATGGTCTGGATT 59.721 41.667 0.00 0.00 0.00 3.01
397 400 3.822735 CGGCAAATATTCATGGTCTGGAT 59.177 43.478 0.00 0.00 0.00 3.41
398 401 3.213506 CGGCAAATATTCATGGTCTGGA 58.786 45.455 0.00 0.00 0.00 3.86
399 402 2.951642 ACGGCAAATATTCATGGTCTGG 59.048 45.455 0.00 0.00 0.00 3.86
400 403 3.627123 TCACGGCAAATATTCATGGTCTG 59.373 43.478 0.00 0.00 0.00 3.51
401 404 3.879295 CTCACGGCAAATATTCATGGTCT 59.121 43.478 0.00 0.00 0.00 3.85
402 405 3.003689 CCTCACGGCAAATATTCATGGTC 59.996 47.826 0.00 0.00 0.00 4.02
403 406 2.951642 CCTCACGGCAAATATTCATGGT 59.048 45.455 0.00 0.00 0.00 3.55
404 407 2.951642 ACCTCACGGCAAATATTCATGG 59.048 45.455 0.00 0.00 0.00 3.66
405 408 3.879295 AGACCTCACGGCAAATATTCATG 59.121 43.478 0.00 0.00 0.00 3.07
406 409 4.156455 AGACCTCACGGCAAATATTCAT 57.844 40.909 0.00 0.00 0.00 2.57
407 410 3.627395 AGACCTCACGGCAAATATTCA 57.373 42.857 0.00 0.00 0.00 2.57
408 411 3.938963 TCAAGACCTCACGGCAAATATTC 59.061 43.478 0.00 0.00 0.00 1.75
409 412 3.941483 CTCAAGACCTCACGGCAAATATT 59.059 43.478 0.00 0.00 0.00 1.28
410 413 3.055094 ACTCAAGACCTCACGGCAAATAT 60.055 43.478 0.00 0.00 0.00 1.28
411 414 2.301870 ACTCAAGACCTCACGGCAAATA 59.698 45.455 0.00 0.00 0.00 1.40
412 415 1.072331 ACTCAAGACCTCACGGCAAAT 59.928 47.619 0.00 0.00 0.00 2.32
413 416 0.468226 ACTCAAGACCTCACGGCAAA 59.532 50.000 0.00 0.00 0.00 3.68
414 417 0.468226 AACTCAAGACCTCACGGCAA 59.532 50.000 0.00 0.00 0.00 4.52
415 418 0.468226 AAACTCAAGACCTCACGGCA 59.532 50.000 0.00 0.00 0.00 5.69
416 419 0.868406 CAAACTCAAGACCTCACGGC 59.132 55.000 0.00 0.00 0.00 5.68
417 420 0.868406 GCAAACTCAAGACCTCACGG 59.132 55.000 0.00 0.00 0.00 4.94
418 421 0.868406 GGCAAACTCAAGACCTCACG 59.132 55.000 0.00 0.00 0.00 4.35
419 422 0.868406 CGGCAAACTCAAGACCTCAC 59.132 55.000 0.00 0.00 0.00 3.51
420 423 0.884704 GCGGCAAACTCAAGACCTCA 60.885 55.000 0.00 0.00 0.00 3.86
421 424 0.603975 AGCGGCAAACTCAAGACCTC 60.604 55.000 1.45 0.00 0.00 3.85
422 425 0.685097 TAGCGGCAAACTCAAGACCT 59.315 50.000 1.45 0.00 0.00 3.85
423 426 1.079503 CTAGCGGCAAACTCAAGACC 58.920 55.000 1.45 0.00 0.00 3.85
424 427 1.079503 CCTAGCGGCAAACTCAAGAC 58.920 55.000 1.45 0.00 0.00 3.01
425 428 0.973632 TCCTAGCGGCAAACTCAAGA 59.026 50.000 1.45 0.00 0.00 3.02
426 429 2.029838 ATCCTAGCGGCAAACTCAAG 57.970 50.000 1.45 0.00 0.00 3.02
427 430 2.083774 CAATCCTAGCGGCAAACTCAA 58.916 47.619 1.45 0.00 0.00 3.02
428 431 1.678728 CCAATCCTAGCGGCAAACTCA 60.679 52.381 1.45 0.00 0.00 3.41
429 432 1.017387 CCAATCCTAGCGGCAAACTC 58.983 55.000 1.45 0.00 0.00 3.01
430 433 1.032114 GCCAATCCTAGCGGCAAACT 61.032 55.000 1.45 0.00 45.52 2.66
431 434 1.433471 GCCAATCCTAGCGGCAAAC 59.567 57.895 1.45 0.00 45.52 2.93
432 435 3.918544 GCCAATCCTAGCGGCAAA 58.081 55.556 1.45 0.00 45.52 3.68
435 438 2.124320 TTGGCCAATCCTAGCGGC 60.124 61.111 16.05 0.00 45.47 6.53
436 439 1.526917 CCTTGGCCAATCCTAGCGG 60.527 63.158 20.85 11.15 36.53 5.52
437 440 1.526917 CCCTTGGCCAATCCTAGCG 60.527 63.158 20.85 5.03 36.53 4.26
438 441 0.466372 GTCCCTTGGCCAATCCTAGC 60.466 60.000 20.85 3.94 36.53 3.42
439 442 0.918983 TGTCCCTTGGCCAATCCTAG 59.081 55.000 20.85 6.51 37.43 3.02
440 443 1.607225 ATGTCCCTTGGCCAATCCTA 58.393 50.000 20.85 5.33 35.26 2.94
441 444 1.607225 TATGTCCCTTGGCCAATCCT 58.393 50.000 20.85 5.97 35.26 3.24
442 445 2.452600 TTATGTCCCTTGGCCAATCC 57.547 50.000 20.85 7.71 0.00 3.01
443 446 3.769300 AGTTTTATGTCCCTTGGCCAATC 59.231 43.478 20.85 10.54 0.00 2.67
444 447 3.790126 AGTTTTATGTCCCTTGGCCAAT 58.210 40.909 20.85 5.30 0.00 3.16
445 448 3.252554 AGTTTTATGTCCCTTGGCCAA 57.747 42.857 19.25 19.25 0.00 4.52
446 449 2.990740 AGTTTTATGTCCCTTGGCCA 57.009 45.000 0.00 0.00 0.00 5.36
447 450 3.576550 TCAAAGTTTTATGTCCCTTGGCC 59.423 43.478 0.00 0.00 0.00 5.36
448 451 4.280929 ACTCAAAGTTTTATGTCCCTTGGC 59.719 41.667 0.00 0.00 0.00 4.52
449 452 6.072119 GGTACTCAAAGTTTTATGTCCCTTGG 60.072 42.308 0.00 0.00 0.00 3.61
450 453 6.488683 TGGTACTCAAAGTTTTATGTCCCTTG 59.511 38.462 0.00 0.00 0.00 3.61
451 454 6.489022 GTGGTACTCAAAGTTTTATGTCCCTT 59.511 38.462 0.00 0.00 0.00 3.95
452 455 6.002082 GTGGTACTCAAAGTTTTATGTCCCT 58.998 40.000 0.00 0.00 0.00 4.20
453 456 5.106830 CGTGGTACTCAAAGTTTTATGTCCC 60.107 44.000 0.00 0.00 0.00 4.46
454 457 5.467735 ACGTGGTACTCAAAGTTTTATGTCC 59.532 40.000 0.00 0.00 0.00 4.02
455 458 6.423001 AGACGTGGTACTCAAAGTTTTATGTC 59.577 38.462 0.00 0.00 0.00 3.06
456 459 6.285990 AGACGTGGTACTCAAAGTTTTATGT 58.714 36.000 0.00 0.00 0.00 2.29
457 460 6.780706 AGACGTGGTACTCAAAGTTTTATG 57.219 37.500 0.00 0.00 0.00 1.90
458 461 8.308931 TCATAGACGTGGTACTCAAAGTTTTAT 58.691 33.333 0.00 0.00 0.00 1.40
459 462 7.596248 GTCATAGACGTGGTACTCAAAGTTTTA 59.404 37.037 0.00 0.00 0.00 1.52
460 463 6.423001 GTCATAGACGTGGTACTCAAAGTTTT 59.577 38.462 0.00 0.00 0.00 2.43
461 464 5.924825 GTCATAGACGTGGTACTCAAAGTTT 59.075 40.000 0.00 0.00 0.00 2.66
462 465 5.243283 AGTCATAGACGTGGTACTCAAAGTT 59.757 40.000 0.00 0.00 37.67 2.66
463 466 4.765856 AGTCATAGACGTGGTACTCAAAGT 59.234 41.667 0.00 0.00 37.67 2.66
464 467 5.312120 AGTCATAGACGTGGTACTCAAAG 57.688 43.478 0.00 0.00 37.67 2.77
465 468 6.207221 TGTTAGTCATAGACGTGGTACTCAAA 59.793 38.462 0.00 0.00 37.67 2.69
466 469 5.706833 TGTTAGTCATAGACGTGGTACTCAA 59.293 40.000 0.00 0.00 37.67 3.02
467 470 5.247862 TGTTAGTCATAGACGTGGTACTCA 58.752 41.667 0.00 0.00 37.67 3.41
468 471 5.808042 TGTTAGTCATAGACGTGGTACTC 57.192 43.478 0.00 0.00 37.67 2.59
469 472 6.016024 TGTTTGTTAGTCATAGACGTGGTACT 60.016 38.462 0.00 0.00 37.67 2.73
470 473 6.088616 GTGTTTGTTAGTCATAGACGTGGTAC 59.911 42.308 0.00 0.00 37.67 3.34
471 474 6.151691 GTGTTTGTTAGTCATAGACGTGGTA 58.848 40.000 0.00 0.00 37.67 3.25
472 475 4.986659 GTGTTTGTTAGTCATAGACGTGGT 59.013 41.667 0.00 0.00 37.67 4.16
473 476 4.986034 TGTGTTTGTTAGTCATAGACGTGG 59.014 41.667 0.00 0.00 37.67 4.94
474 477 6.519353 TTGTGTTTGTTAGTCATAGACGTG 57.481 37.500 0.00 0.00 37.67 4.49
475 478 8.997621 ATATTGTGTTTGTTAGTCATAGACGT 57.002 30.769 0.00 0.00 37.67 4.34
482 485 7.967854 GCTGCATAATATTGTGTTTGTTAGTCA 59.032 33.333 13.03 0.12 0.00 3.41
483 486 7.967854 TGCTGCATAATATTGTGTTTGTTAGTC 59.032 33.333 13.03 0.00 0.00 2.59
484 487 7.825681 TGCTGCATAATATTGTGTTTGTTAGT 58.174 30.769 13.03 0.00 0.00 2.24
485 488 8.586273 GTTGCTGCATAATATTGTGTTTGTTAG 58.414 33.333 13.03 4.89 0.00 2.34
486 489 8.084684 TGTTGCTGCATAATATTGTGTTTGTTA 58.915 29.630 13.03 0.00 0.00 2.41
487 490 6.927936 TGTTGCTGCATAATATTGTGTTTGTT 59.072 30.769 13.03 0.00 0.00 2.83
488 491 6.453943 TGTTGCTGCATAATATTGTGTTTGT 58.546 32.000 13.03 0.00 0.00 2.83
489 492 6.454583 GCTGTTGCTGCATAATATTGTGTTTG 60.455 38.462 13.03 5.73 36.03 2.93
490 493 5.577945 GCTGTTGCTGCATAATATTGTGTTT 59.422 36.000 13.03 0.00 36.03 2.83
491 494 5.104374 GCTGTTGCTGCATAATATTGTGTT 58.896 37.500 13.03 0.00 36.03 3.32
492 495 4.675510 GCTGTTGCTGCATAATATTGTGT 58.324 39.130 13.03 0.00 36.03 3.72
507 510 3.911661 ATTCTGAACTCAAGCTGTTGC 57.088 42.857 0.00 0.00 40.05 4.17
516 519 9.987272 CCAGACACATATATAATTCTGAACTCA 57.013 33.333 14.16 0.00 33.71 3.41
517 520 8.930760 GCCAGACACATATATAATTCTGAACTC 58.069 37.037 14.16 2.79 33.71 3.01
518 521 7.880195 GGCCAGACACATATATAATTCTGAACT 59.120 37.037 14.16 0.00 33.71 3.01
519 522 7.880195 AGGCCAGACACATATATAATTCTGAAC 59.120 37.037 5.01 8.83 33.71 3.18
520 523 7.977818 AGGCCAGACACATATATAATTCTGAA 58.022 34.615 5.01 0.00 33.71 3.02
521 524 7.559335 AGGCCAGACACATATATAATTCTGA 57.441 36.000 5.01 0.00 33.71 3.27
522 525 8.535335 AGTAGGCCAGACACATATATAATTCTG 58.465 37.037 5.01 8.64 0.00 3.02
523 526 8.671987 AGTAGGCCAGACACATATATAATTCT 57.328 34.615 5.01 0.00 0.00 2.40
524 527 8.531982 TGAGTAGGCCAGACACATATATAATTC 58.468 37.037 5.01 0.00 0.00 2.17
525 528 8.314751 GTGAGTAGGCCAGACACATATATAATT 58.685 37.037 5.01 0.00 0.00 1.40
526 529 7.363007 CGTGAGTAGGCCAGACACATATATAAT 60.363 40.741 5.01 0.00 0.00 1.28
527 530 6.072119 CGTGAGTAGGCCAGACACATATATAA 60.072 42.308 5.01 0.00 0.00 0.98
528 531 5.414765 CGTGAGTAGGCCAGACACATATATA 59.585 44.000 5.01 0.00 0.00 0.86
529 532 4.218635 CGTGAGTAGGCCAGACACATATAT 59.781 45.833 5.01 0.00 0.00 0.86
530 533 3.568430 CGTGAGTAGGCCAGACACATATA 59.432 47.826 5.01 0.00 0.00 0.86
531 534 2.362397 CGTGAGTAGGCCAGACACATAT 59.638 50.000 5.01 0.00 0.00 1.78
532 535 1.749063 CGTGAGTAGGCCAGACACATA 59.251 52.381 5.01 0.00 0.00 2.29
533 536 0.532573 CGTGAGTAGGCCAGACACAT 59.467 55.000 5.01 0.00 0.00 3.21
534 537 1.532604 CCGTGAGTAGGCCAGACACA 61.533 60.000 5.01 4.50 0.00 3.72
535 538 1.215647 CCGTGAGTAGGCCAGACAC 59.784 63.158 5.01 8.85 0.00 3.67
536 539 0.541063 TTCCGTGAGTAGGCCAGACA 60.541 55.000 5.01 0.00 0.00 3.41
537 540 0.824759 ATTCCGTGAGTAGGCCAGAC 59.175 55.000 5.01 1.77 0.00 3.51
538 541 1.207089 CAATTCCGTGAGTAGGCCAGA 59.793 52.381 5.01 0.00 0.00 3.86
539 542 1.066143 ACAATTCCGTGAGTAGGCCAG 60.066 52.381 5.01 0.00 0.00 4.85
540 543 0.981183 ACAATTCCGTGAGTAGGCCA 59.019 50.000 5.01 0.00 0.00 5.36
541 544 2.007608 GAACAATTCCGTGAGTAGGCC 58.992 52.381 0.00 0.00 0.00 5.19
542 545 2.007608 GGAACAATTCCGTGAGTAGGC 58.992 52.381 0.00 0.00 40.59 3.93
568 571 5.452302 CGAAATTACTAATCCTTTTGCGCAG 59.548 40.000 11.31 0.00 0.00 5.18
569 572 5.328691 CGAAATTACTAATCCTTTTGCGCA 58.671 37.500 5.66 5.66 0.00 6.09
570 573 4.733405 CCGAAATTACTAATCCTTTTGCGC 59.267 41.667 0.00 0.00 0.00 6.09
571 574 6.114221 TCCGAAATTACTAATCCTTTTGCG 57.886 37.500 0.00 0.00 0.00 4.85
572 575 7.703328 TGATCCGAAATTACTAATCCTTTTGC 58.297 34.615 0.00 0.00 0.00 3.68
585 588 9.729281 GGGGTATAACTAATTGATCCGAAATTA 57.271 33.333 0.00 0.00 0.00 1.40
586 589 8.445588 AGGGGTATAACTAATTGATCCGAAATT 58.554 33.333 0.00 0.00 0.00 1.82
587 590 7.985589 AGGGGTATAACTAATTGATCCGAAAT 58.014 34.615 0.00 0.00 0.00 2.17
588 591 7.383156 AGGGGTATAACTAATTGATCCGAAA 57.617 36.000 0.00 0.00 0.00 3.46
589 592 6.013984 GGAGGGGTATAACTAATTGATCCGAA 60.014 42.308 0.00 0.00 0.00 4.30
590 593 5.482878 GGAGGGGTATAACTAATTGATCCGA 59.517 44.000 0.00 0.00 0.00 4.55
591 594 5.484290 AGGAGGGGTATAACTAATTGATCCG 59.516 44.000 0.00 0.00 0.00 4.18
592 595 6.954352 AGGAGGGGTATAACTAATTGATCC 57.046 41.667 0.00 0.00 0.00 3.36
593 596 7.883833 GGAAAGGAGGGGTATAACTAATTGATC 59.116 40.741 0.00 0.00 0.00 2.92
594 597 7.352522 TGGAAAGGAGGGGTATAACTAATTGAT 59.647 37.037 0.00 0.00 0.00 2.57
595 598 6.679303 TGGAAAGGAGGGGTATAACTAATTGA 59.321 38.462 0.00 0.00 0.00 2.57
596 599 6.906848 TGGAAAGGAGGGGTATAACTAATTG 58.093 40.000 0.00 0.00 0.00 2.32
597 600 7.526918 CATGGAAAGGAGGGGTATAACTAATT 58.473 38.462 0.00 0.00 0.00 1.40
598 601 6.467339 GCATGGAAAGGAGGGGTATAACTAAT 60.467 42.308 0.00 0.00 0.00 1.73
599 602 5.163131 GCATGGAAAGGAGGGGTATAACTAA 60.163 44.000 0.00 0.00 0.00 2.24
600 603 4.349930 GCATGGAAAGGAGGGGTATAACTA 59.650 45.833 0.00 0.00 0.00 2.24
601 604 3.138468 GCATGGAAAGGAGGGGTATAACT 59.862 47.826 0.00 0.00 0.00 2.24
602 605 3.117663 TGCATGGAAAGGAGGGGTATAAC 60.118 47.826 0.00 0.00 0.00 1.89
603 606 3.117663 GTGCATGGAAAGGAGGGGTATAA 60.118 47.826 0.00 0.00 0.00 0.98
604 607 2.441750 GTGCATGGAAAGGAGGGGTATA 59.558 50.000 0.00 0.00 0.00 1.47
605 608 1.215423 GTGCATGGAAAGGAGGGGTAT 59.785 52.381 0.00 0.00 0.00 2.73
606 609 0.623723 GTGCATGGAAAGGAGGGGTA 59.376 55.000 0.00 0.00 0.00 3.69
607 610 1.384191 GTGCATGGAAAGGAGGGGT 59.616 57.895 0.00 0.00 0.00 4.95
608 611 0.032813 ATGTGCATGGAAAGGAGGGG 60.033 55.000 0.00 0.00 0.00 4.79
609 612 1.108776 CATGTGCATGGAAAGGAGGG 58.891 55.000 4.35 0.00 35.24 4.30
610 613 0.458669 GCATGTGCATGGAAAGGAGG 59.541 55.000 13.28 0.00 41.59 4.30
868 872 0.734942 CGGTCGCACATAAACGGTCT 60.735 55.000 0.00 0.00 0.00 3.85
991 996 2.360350 CAGAACCATGGCTGCGGT 60.360 61.111 13.04 0.00 36.98 5.68
1143 1148 2.557317 ACAACAAAGACCACCTACACG 58.443 47.619 0.00 0.00 0.00 4.49
1172 1177 5.278266 GGACGAGGACAAATCAAATCAAACA 60.278 40.000 0.00 0.00 0.00 2.83
1237 1242 2.171840 CGGGTCCTCAAGAGAGAAAGA 58.828 52.381 0.00 0.00 44.98 2.52
1983 1992 9.563898 GGCAAAATTTAGTACAATACAACTACC 57.436 33.333 0.00 0.00 0.00 3.18
2327 2390 2.057137 TTCTGCATTCATACCAGCCC 57.943 50.000 0.00 0.00 0.00 5.19
2490 2613 6.041296 ACTCTGCATTCTTCAACTCCAAATTT 59.959 34.615 0.00 0.00 0.00 1.82
3203 3428 3.976490 CTAGGGTGGCTCGGGGTCA 62.976 68.421 0.00 0.00 0.00 4.02
3418 3896 3.421844 GAAACACCTAAAGGCATCCACT 58.578 45.455 0.00 0.00 39.32 4.00
3419 3897 2.492088 GGAAACACCTAAAGGCATCCAC 59.508 50.000 0.00 0.00 39.32 4.02
3420 3898 2.802719 GGAAACACCTAAAGGCATCCA 58.197 47.619 0.00 0.00 39.32 3.41
3421 3899 1.743394 CGGAAACACCTAAAGGCATCC 59.257 52.381 0.00 0.00 39.32 3.51
3422 3900 2.418976 GACGGAAACACCTAAAGGCATC 59.581 50.000 0.00 0.00 39.32 3.91
3423 3901 2.433436 GACGGAAACACCTAAAGGCAT 58.567 47.619 0.00 0.00 39.32 4.40
3424 3902 1.874739 CGACGGAAACACCTAAAGGCA 60.875 52.381 0.00 0.00 39.32 4.75
3425 3903 0.794473 CGACGGAAACACCTAAAGGC 59.206 55.000 0.00 0.00 39.32 4.35
3426 3904 2.064014 GACGACGGAAACACCTAAAGG 58.936 52.381 0.00 0.00 42.17 3.11
3427 3905 2.064014 GGACGACGGAAACACCTAAAG 58.936 52.381 0.00 0.00 36.31 1.85
3428 3906 1.270252 GGGACGACGGAAACACCTAAA 60.270 52.381 0.00 0.00 36.31 1.85
3429 3907 0.318120 GGGACGACGGAAACACCTAA 59.682 55.000 0.00 0.00 36.31 2.69
3430 3908 1.535204 GGGGACGACGGAAACACCTA 61.535 60.000 0.00 0.00 36.31 3.08
3431 3909 2.739132 GGGACGACGGAAACACCT 59.261 61.111 0.00 0.00 36.31 4.00
3432 3910 2.357881 GGGGACGACGGAAACACC 60.358 66.667 0.00 0.00 0.00 4.16
3444 3922 3.155167 CTAGGGTGGCTCGGGGAC 61.155 72.222 0.00 0.00 0.00 4.46
3445 3923 3.352748 TCTAGGGTGGCTCGGGGA 61.353 66.667 0.00 0.00 0.00 4.81
3446 3924 3.155167 GTCTAGGGTGGCTCGGGG 61.155 72.222 0.00 0.00 0.00 5.73
3447 3925 3.155167 GGTCTAGGGTGGCTCGGG 61.155 72.222 0.00 0.00 0.00 5.14
3448 3926 2.294170 TAGGGTCTAGGGTGGCTCGG 62.294 65.000 0.00 0.00 0.00 4.63
3449 3927 0.824182 CTAGGGTCTAGGGTGGCTCG 60.824 65.000 0.00 0.00 0.00 5.03
3450 3928 0.262285 ACTAGGGTCTAGGGTGGCTC 59.738 60.000 6.86 0.00 0.00 4.70
3451 3929 0.717196 AACTAGGGTCTAGGGTGGCT 59.283 55.000 6.86 0.00 0.00 4.75
3452 3930 0.831307 CAACTAGGGTCTAGGGTGGC 59.169 60.000 6.86 0.00 0.00 5.01
3453 3931 2.544844 TCAACTAGGGTCTAGGGTGG 57.455 55.000 6.86 0.00 0.00 4.61
3454 3932 2.103263 GCATCAACTAGGGTCTAGGGTG 59.897 54.545 6.86 4.80 0.00 4.61
3455 3933 2.399580 GCATCAACTAGGGTCTAGGGT 58.600 52.381 6.86 0.00 0.00 4.34
3456 3934 1.694696 GGCATCAACTAGGGTCTAGGG 59.305 57.143 6.86 0.00 0.00 3.53
3457 3935 2.683768 AGGCATCAACTAGGGTCTAGG 58.316 52.381 6.86 0.00 0.00 3.02
3458 3936 4.762289 AAAGGCATCAACTAGGGTCTAG 57.238 45.455 0.00 0.83 0.00 2.43
3459 3937 4.654262 CCTAAAGGCATCAACTAGGGTCTA 59.346 45.833 0.00 0.00 0.00 2.59
3460 3938 3.456277 CCTAAAGGCATCAACTAGGGTCT 59.544 47.826 0.00 0.00 0.00 3.85
3461 3939 3.200165 ACCTAAAGGCATCAACTAGGGTC 59.800 47.826 0.00 0.00 39.32 4.46
3462 3940 3.054361 CACCTAAAGGCATCAACTAGGGT 60.054 47.826 0.00 0.00 39.32 4.34
3463 3941 3.054361 ACACCTAAAGGCATCAACTAGGG 60.054 47.826 0.00 0.00 39.32 3.53
3464 3942 4.222124 ACACCTAAAGGCATCAACTAGG 57.778 45.455 0.00 0.00 39.32 3.02
3465 3943 6.575162 AAAACACCTAAAGGCATCAACTAG 57.425 37.500 0.00 0.00 39.32 2.57
3466 3944 5.180492 CGAAAACACCTAAAGGCATCAACTA 59.820 40.000 0.00 0.00 39.32 2.24
3467 3945 4.023193 CGAAAACACCTAAAGGCATCAACT 60.023 41.667 0.00 0.00 39.32 3.16
3468 3946 4.226761 CGAAAACACCTAAAGGCATCAAC 58.773 43.478 0.00 0.00 39.32 3.18
3469 3947 3.886505 ACGAAAACACCTAAAGGCATCAA 59.113 39.130 0.00 0.00 39.32 2.57
3470 3948 3.482436 ACGAAAACACCTAAAGGCATCA 58.518 40.909 0.00 0.00 39.32 3.07
3471 3949 3.424433 CGACGAAAACACCTAAAGGCATC 60.424 47.826 0.00 0.00 39.32 3.91


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.