Multiple sequence alignment - TraesCS4D01G083600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G083600 chr4D 100.000 4946 0 0 1 4946 57470941 57475886 0.000000e+00 9134.0
1 TraesCS4D01G083600 chr6B 90.837 2412 111 38 1769 4101 551790068 551792448 0.000000e+00 3129.0
2 TraesCS4D01G083600 chr6B 95.387 542 21 2 4406 4946 551792826 551793364 0.000000e+00 859.0
3 TraesCS4D01G083600 chr6B 89.515 639 32 16 1028 1650 551789425 551790044 0.000000e+00 776.0
4 TraesCS4D01G083600 chr6B 83.721 473 57 10 1 470 551784096 551784551 3.540000e-116 429.0
5 TraesCS4D01G083600 chr6B 89.407 236 11 6 4098 4331 551792606 551792829 8.100000e-73 285.0
6 TraesCS4D01G083600 chr6B 89.041 219 19 4 468 682 423623693 423623910 2.940000e-67 267.0
7 TraesCS4D01G083600 chr6B 87.209 172 11 7 714 880 551784548 551784713 8.450000e-43 185.0
8 TraesCS4D01G083600 chr4B 91.552 1894 87 24 3096 4946 86060579 86062442 0.000000e+00 2543.0
9 TraesCS4D01G083600 chr4B 94.461 993 41 11 1769 2758 86059320 86060301 0.000000e+00 1517.0
10 TraesCS4D01G083600 chr4B 89.433 653 47 13 1001 1650 86058664 86059297 0.000000e+00 804.0
11 TraesCS4D01G083600 chr4B 86.774 310 17 12 714 1005 86058310 86058613 1.720000e-84 324.0
12 TraesCS4D01G083600 chr4B 88.688 221 21 4 465 682 234685924 234685705 2.940000e-67 267.0
13 TraesCS4D01G083600 chr4B 78.827 307 49 9 28 333 489400060 489399769 5.050000e-45 193.0
14 TraesCS4D01G083600 chr4B 82.963 135 20 3 268 400 665812157 665812290 8.700000e-23 119.0
15 TraesCS4D01G083600 chr4B 81.739 115 3 3 2755 2852 86060463 86060576 4.100000e-11 80.5
16 TraesCS4D01G083600 chr4A 89.817 1748 100 26 3241 4946 539300506 539298795 0.000000e+00 2170.0
17 TraesCS4D01G083600 chr4A 89.372 621 41 16 1945 2550 539301504 539300894 0.000000e+00 758.0
18 TraesCS4D01G083600 chr4A 87.221 673 44 21 1001 1648 539302272 539301617 0.000000e+00 728.0
19 TraesCS4D01G083600 chr4A 91.755 473 36 3 1 470 539304378 539303906 0.000000e+00 654.0
20 TraesCS4D01G083600 chr4A 85.502 269 16 12 739 993 539302587 539302328 4.910000e-65 259.0
21 TraesCS4D01G083600 chr4A 96.491 114 4 0 1754 1867 539301614 539301501 6.540000e-44 189.0
22 TraesCS4D01G083600 chr4A 86.364 110 12 2 2627 2733 539300869 539300760 3.130000e-22 117.0
23 TraesCS4D01G083600 chr2B 90.000 220 18 4 467 682 741946993 741946774 1.050000e-71 281.0
24 TraesCS4D01G083600 chr2B 88.341 223 22 4 463 682 4757642 4757421 1.060000e-66 265.0
25 TraesCS4D01G083600 chr2B 79.351 339 51 15 4 332 643687806 643687477 2.320000e-53 220.0
26 TraesCS4D01G083600 chr7B 90.865 208 16 3 478 682 647818315 647818522 4.880000e-70 276.0
27 TraesCS4D01G083600 chr7B 78.316 392 71 10 7 396 582743603 582743224 1.780000e-59 241.0
28 TraesCS4D01G083600 chr7B 97.391 115 2 1 1648 1762 735033994 735033881 1.400000e-45 195.0
29 TraesCS4D01G083600 chr6A 89.815 216 20 2 469 682 504201965 504202180 4.880000e-70 276.0
30 TraesCS4D01G083600 chr3B 87.083 240 29 2 1 239 720215357 720215595 2.270000e-68 270.0
31 TraesCS4D01G083600 chr3B 98.214 112 2 0 1646 1757 178397167 178397278 3.910000e-46 196.0
32 TraesCS4D01G083600 chr3B 95.833 120 5 0 1645 1764 22055101 22054982 1.400000e-45 195.0
33 TraesCS4D01G083600 chr3B 96.610 118 2 2 1640 1755 176633985 176634102 1.400000e-45 195.0
34 TraesCS4D01G083600 chr7D 89.904 208 18 3 478 682 167388589 167388382 1.060000e-66 265.0
35 TraesCS4D01G083600 chr1D 88.636 220 22 3 467 683 468747517 468747736 1.060000e-66 265.0
36 TraesCS4D01G083600 chr1D 96.269 134 5 0 3103 3236 68403174 68403307 2.320000e-53 220.0
37 TraesCS4D01G083600 chr1D 96.269 134 5 0 3103 3236 254527062 254527195 2.320000e-53 220.0
38 TraesCS4D01G083600 chr1D 96.269 134 5 0 3103 3236 298349174 298349041 2.320000e-53 220.0
39 TraesCS4D01G083600 chr1D 96.269 134 5 0 3103 3236 459903261 459903128 2.320000e-53 220.0
40 TraesCS4D01G083600 chr1D 96.522 115 3 1 1649 1763 184463124 184463011 6.540000e-44 189.0
41 TraesCS4D01G083600 chr1D 94.309 123 5 2 1638 1759 386156710 386156831 2.350000e-43 187.0
42 TraesCS4D01G083600 chr1D 78.667 150 28 4 248 396 204283343 204283489 4.080000e-16 97.1
43 TraesCS4D01G083600 chr7A 88.182 220 22 4 466 682 659640375 659640157 4.910000e-65 259.0
44 TraesCS4D01G083600 chr2A 77.975 395 71 11 1 392 14503911 14504292 2.980000e-57 233.0
45 TraesCS4D01G083600 chr2A 96.774 31 1 0 685 715 578120360 578120330 9.000000e-03 52.8
46 TraesCS4D01G083600 chr5B 97.015 134 4 0 3103 3236 599755834 599755967 4.980000e-55 226.0
47 TraesCS4D01G083600 chr3A 97.015 134 4 0 3103 3236 650013005 650012872 4.980000e-55 226.0
48 TraesCS4D01G083600 chr1A 96.269 134 5 0 3103 3236 532075147 532075280 2.320000e-53 220.0
49 TraesCS4D01G083600 chr2D 99.091 110 1 0 1649 1758 352204161 352204270 1.090000e-46 198.0
50 TraesCS4D01G083600 chr2D 95.041 121 4 2 1639 1758 272263179 272263060 6.540000e-44 189.0
51 TraesCS4D01G083600 chr2D 78.279 244 36 14 161 399 32786905 32786674 1.860000e-29 141.0
52 TraesCS4D01G083600 chr5A 95.726 117 4 1 1644 1759 69844899 69844783 2.350000e-43 187.0
53 TraesCS4D01G083600 chr5A 82.222 135 21 3 268 400 705774103 705774236 4.050000e-21 113.0
54 TraesCS4D01G083600 chr3D 77.918 317 57 10 1 314 555013212 555013518 8.450000e-43 185.0
55 TraesCS4D01G083600 chr3D 77.955 313 51 15 25 332 300118065 300118364 3.930000e-41 180.0
56 TraesCS4D01G083600 chr5D 75.648 193 39 7 163 353 299809230 299809416 6.820000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G083600 chr4D 57470941 57475886 4945 False 9134.000000 9134 100.000000 1 4946 1 chr4D.!!$F1 4945
1 TraesCS4D01G083600 chr6B 551789425 551793364 3939 False 1262.250000 3129 91.286500 1028 4946 4 chr6B.!!$F3 3918
2 TraesCS4D01G083600 chr6B 551784096 551784713 617 False 307.000000 429 85.465000 1 880 2 chr6B.!!$F2 879
3 TraesCS4D01G083600 chr4B 86058310 86062442 4132 False 1053.700000 2543 88.791800 714 4946 5 chr4B.!!$F2 4232
4 TraesCS4D01G083600 chr4A 539298795 539304378 5583 True 696.428571 2170 89.503143 1 4946 7 chr4A.!!$R1 4945

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
256 259 0.178801 AAAACCCCTCCCCTCCTCAT 60.179 55.0 0.0 0.0 0.00 2.90 F
1261 2641 0.747255 TTGCTCTAGGATGCGGTCTC 59.253 55.0 0.0 0.0 0.00 3.36 F
2778 4418 0.884704 TTCTTCGTGCAGTTGGCTCC 60.885 55.0 0.0 0.0 45.15 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2066 3491 0.317103 CTTGAGTCCGTCGCCTATCG 60.317 60.0 0.00 0.0 40.15 2.92 R
2938 4610 0.255890 GCTGAACTGGGGGCAGATTA 59.744 55.0 0.00 0.0 0.00 1.75 R
4173 6075 0.393537 CATCTGTTGGACCTCAGGCC 60.394 60.0 14.17 0.0 33.13 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
83 84 2.202362 CAGTGAGAGGTCGCGTCG 60.202 66.667 5.77 0.00 38.32 5.12
84 85 4.104417 AGTGAGAGGTCGCGTCGC 62.104 66.667 7.29 7.29 38.32 5.19
85 86 4.400109 GTGAGAGGTCGCGTCGCA 62.400 66.667 18.75 1.03 0.00 5.10
235 237 1.321074 GGATTGGTCCGGACTCTCGT 61.321 60.000 32.52 15.17 34.13 4.18
240 242 1.962807 TGGTCCGGACTCTCGTAAAAA 59.037 47.619 32.52 3.32 0.00 1.94
256 259 0.178801 AAAACCCCTCCCCTCCTCAT 60.179 55.000 0.00 0.00 0.00 2.90
267 270 3.117322 TCCCCTCCTCATGTTTGTTTTCA 60.117 43.478 0.00 0.00 0.00 2.69
275 278 4.738124 TCATGTTTGTTTTCAGTTTGCGA 58.262 34.783 0.00 0.00 0.00 5.10
300 303 3.449227 CGCGTCTGGACAGCCCTA 61.449 66.667 0.00 0.00 35.38 3.53
481 486 8.823220 ATTTTCTATACTTAGGCCACATTTGT 57.177 30.769 5.01 0.00 0.00 2.83
482 487 8.644374 TTTTCTATACTTAGGCCACATTTGTT 57.356 30.769 5.01 0.00 0.00 2.83
483 488 8.644374 TTTCTATACTTAGGCCACATTTGTTT 57.356 30.769 5.01 0.00 0.00 2.83
484 489 7.859325 TCTATACTTAGGCCACATTTGTTTC 57.141 36.000 5.01 0.00 0.00 2.78
485 490 7.398829 TCTATACTTAGGCCACATTTGTTTCA 58.601 34.615 5.01 0.00 0.00 2.69
486 491 8.052748 TCTATACTTAGGCCACATTTGTTTCAT 58.947 33.333 5.01 0.00 0.00 2.57
487 492 9.337396 CTATACTTAGGCCACATTTGTTTCATA 57.663 33.333 5.01 0.00 0.00 2.15
488 493 6.909550 ACTTAGGCCACATTTGTTTCATAA 57.090 33.333 5.01 0.00 0.00 1.90
489 494 6.924111 ACTTAGGCCACATTTGTTTCATAAG 58.076 36.000 5.01 1.56 32.39 1.73
490 495 6.493458 ACTTAGGCCACATTTGTTTCATAAGT 59.507 34.615 5.01 2.25 33.52 2.24
491 496 5.391312 AGGCCACATTTGTTTCATAAGTC 57.609 39.130 5.01 0.00 0.00 3.01
492 497 4.220602 AGGCCACATTTGTTTCATAAGTCC 59.779 41.667 5.01 0.00 0.00 3.85
493 498 4.220602 GGCCACATTTGTTTCATAAGTCCT 59.779 41.667 0.00 0.00 0.00 3.85
494 499 5.417580 GGCCACATTTGTTTCATAAGTCCTA 59.582 40.000 0.00 0.00 0.00 2.94
495 500 6.404734 GGCCACATTTGTTTCATAAGTCCTAG 60.405 42.308 0.00 0.00 0.00 3.02
496 501 6.404734 GCCACATTTGTTTCATAAGTCCTAGG 60.405 42.308 0.82 0.82 0.00 3.02
497 502 6.884295 CCACATTTGTTTCATAAGTCCTAGGA 59.116 38.462 7.62 7.62 0.00 2.94
498 503 7.148239 CCACATTTGTTTCATAAGTCCTAGGAC 60.148 40.741 31.29 31.29 44.86 3.85
525 530 3.487120 AGTCCCAACTAAAAAGTCGCT 57.513 42.857 0.00 0.00 32.59 4.93
526 531 4.612264 AGTCCCAACTAAAAAGTCGCTA 57.388 40.909 0.00 0.00 32.59 4.26
527 532 4.566987 AGTCCCAACTAAAAAGTCGCTAG 58.433 43.478 0.00 0.00 32.59 3.42
528 533 4.040095 AGTCCCAACTAAAAAGTCGCTAGT 59.960 41.667 0.00 0.00 32.59 2.57
529 534 4.388165 GTCCCAACTAAAAAGTCGCTAGTC 59.612 45.833 0.00 0.00 0.00 2.59
530 535 3.683340 CCCAACTAAAAAGTCGCTAGTCC 59.317 47.826 0.00 0.00 0.00 3.85
531 536 3.683340 CCAACTAAAAAGTCGCTAGTCCC 59.317 47.826 0.00 0.00 0.00 4.46
532 537 4.562963 CCAACTAAAAAGTCGCTAGTCCCT 60.563 45.833 0.00 0.00 0.00 4.20
533 538 5.337009 CCAACTAAAAAGTCGCTAGTCCCTA 60.337 44.000 0.00 0.00 0.00 3.53
534 539 5.990120 ACTAAAAAGTCGCTAGTCCCTAA 57.010 39.130 0.00 0.00 0.00 2.69
535 540 6.350629 ACTAAAAAGTCGCTAGTCCCTAAA 57.649 37.500 0.00 0.00 0.00 1.85
536 541 6.762333 ACTAAAAAGTCGCTAGTCCCTAAAA 58.238 36.000 0.00 0.00 0.00 1.52
537 542 7.219322 ACTAAAAAGTCGCTAGTCCCTAAAAA 58.781 34.615 0.00 0.00 0.00 1.94
538 543 6.555812 AAAAAGTCGCTAGTCCCTAAAAAG 57.444 37.500 0.00 0.00 0.00 2.27
539 544 4.886496 AAGTCGCTAGTCCCTAAAAAGT 57.114 40.909 0.00 0.00 0.00 2.66
540 545 4.453177 AGTCGCTAGTCCCTAAAAAGTC 57.547 45.455 0.00 0.00 0.00 3.01
541 546 3.195182 AGTCGCTAGTCCCTAAAAAGTCC 59.805 47.826 0.00 0.00 0.00 3.85
542 547 2.498885 TCGCTAGTCCCTAAAAAGTCCC 59.501 50.000 0.00 0.00 0.00 4.46
543 548 2.500504 CGCTAGTCCCTAAAAAGTCCCT 59.499 50.000 0.00 0.00 0.00 4.20
544 549 3.703052 CGCTAGTCCCTAAAAAGTCCCTA 59.297 47.826 0.00 0.00 0.00 3.53
545 550 4.344390 CGCTAGTCCCTAAAAAGTCCCTAT 59.656 45.833 0.00 0.00 0.00 2.57
546 551 5.163332 CGCTAGTCCCTAAAAAGTCCCTATT 60.163 44.000 0.00 0.00 0.00 1.73
547 552 6.631992 CGCTAGTCCCTAAAAAGTCCCTATTT 60.632 42.308 0.00 0.00 0.00 1.40
548 553 6.542735 GCTAGTCCCTAAAAAGTCCCTATTTG 59.457 42.308 0.00 0.00 0.00 2.32
549 554 6.464530 AGTCCCTAAAAAGTCCCTATTTGT 57.535 37.500 0.00 0.00 0.00 2.83
550 555 6.860034 AGTCCCTAAAAAGTCCCTATTTGTT 58.140 36.000 0.00 0.00 0.00 2.83
551 556 7.302948 AGTCCCTAAAAAGTCCCTATTTGTTT 58.697 34.615 0.00 0.00 0.00 2.83
552 557 7.232737 AGTCCCTAAAAAGTCCCTATTTGTTTG 59.767 37.037 0.00 0.00 0.00 2.93
553 558 6.495526 TCCCTAAAAAGTCCCTATTTGTTTGG 59.504 38.462 0.00 0.00 0.00 3.28
554 559 6.269077 CCCTAAAAAGTCCCTATTTGTTTGGT 59.731 38.462 0.00 0.00 0.00 3.67
555 560 7.202056 CCCTAAAAAGTCCCTATTTGTTTGGTT 60.202 37.037 0.00 0.00 0.00 3.67
556 561 7.870954 CCTAAAAAGTCCCTATTTGTTTGGTTC 59.129 37.037 0.00 0.00 0.00 3.62
557 562 6.800072 AAAAGTCCCTATTTGTTTGGTTCA 57.200 33.333 0.00 0.00 0.00 3.18
558 563 6.994421 AAAGTCCCTATTTGTTTGGTTCAT 57.006 33.333 0.00 0.00 0.00 2.57
559 564 5.982890 AGTCCCTATTTGTTTGGTTCATG 57.017 39.130 0.00 0.00 0.00 3.07
560 565 4.772100 AGTCCCTATTTGTTTGGTTCATGG 59.228 41.667 0.00 0.00 0.00 3.66
561 566 4.081697 GTCCCTATTTGTTTGGTTCATGGG 60.082 45.833 0.00 0.00 0.00 4.00
562 567 4.093011 CCCTATTTGTTTGGTTCATGGGA 58.907 43.478 0.00 0.00 33.14 4.37
563 568 4.081697 CCCTATTTGTTTGGTTCATGGGAC 60.082 45.833 0.00 0.00 33.14 4.46
564 569 4.772100 CCTATTTGTTTGGTTCATGGGACT 59.228 41.667 0.00 0.00 0.00 3.85
565 570 5.949354 CCTATTTGTTTGGTTCATGGGACTA 59.051 40.000 0.00 0.00 0.00 2.59
566 571 6.435904 CCTATTTGTTTGGTTCATGGGACTAA 59.564 38.462 0.00 0.00 0.00 2.24
567 572 6.739331 ATTTGTTTGGTTCATGGGACTAAA 57.261 33.333 7.30 7.30 0.00 1.85
568 573 5.523438 TTGTTTGGTTCATGGGACTAAAC 57.477 39.130 22.77 22.77 44.08 2.01
570 575 5.144100 TGTTTGGTTCATGGGACTAAACAT 58.856 37.500 25.67 0.00 46.49 2.71
571 576 5.010516 TGTTTGGTTCATGGGACTAAACATG 59.989 40.000 25.67 0.00 46.49 3.21
572 577 3.696045 TGGTTCATGGGACTAAACATGG 58.304 45.455 0.00 0.00 43.49 3.66
573 578 3.332187 TGGTTCATGGGACTAAACATGGA 59.668 43.478 0.00 0.00 43.49 3.41
574 579 4.965119 GTTCATGGGACTAAACATGGAC 57.035 45.455 0.00 0.00 43.90 4.02
575 580 4.589908 GTTCATGGGACTAAACATGGACT 58.410 43.478 8.44 0.00 45.74 3.85
576 581 4.927267 TCATGGGACTAAACATGGACTT 57.073 40.909 0.00 0.00 43.49 3.01
577 582 6.177610 GTTCATGGGACTAAACATGGACTTA 58.822 40.000 8.44 0.00 45.74 2.24
578 583 6.575244 TCATGGGACTAAACATGGACTTAT 57.425 37.500 0.00 0.00 43.49 1.73
579 584 6.356556 TCATGGGACTAAACATGGACTTATG 58.643 40.000 0.00 0.00 43.49 1.90
580 585 5.110814 TGGGACTAAACATGGACTTATGG 57.889 43.478 0.00 0.00 32.32 2.74
581 586 4.785914 TGGGACTAAACATGGACTTATGGA 59.214 41.667 0.00 0.00 32.32 3.41
582 587 5.123936 GGGACTAAACATGGACTTATGGAC 58.876 45.833 0.00 0.00 32.32 4.02
583 588 5.123936 GGACTAAACATGGACTTATGGACC 58.876 45.833 0.00 0.00 32.32 4.46
584 589 5.338871 GGACTAAACATGGACTTATGGACCA 60.339 44.000 0.00 0.00 38.09 4.02
585 590 6.327386 ACTAAACATGGACTTATGGACCAT 57.673 37.500 12.67 12.67 43.97 3.55
591 596 5.708736 ATGGACTTATGGACCATGTTACA 57.291 39.130 17.73 8.08 41.96 2.41
592 597 5.506730 TGGACTTATGGACCATGTTACAA 57.493 39.130 17.73 1.83 0.00 2.41
593 598 5.250200 TGGACTTATGGACCATGTTACAAC 58.750 41.667 17.73 2.35 0.00 3.32
594 599 5.013704 TGGACTTATGGACCATGTTACAACT 59.986 40.000 17.73 0.00 0.00 3.16
595 600 6.213802 TGGACTTATGGACCATGTTACAACTA 59.786 38.462 17.73 0.00 0.00 2.24
596 601 7.107542 GGACTTATGGACCATGTTACAACTAA 58.892 38.462 17.73 0.00 0.00 2.24
597 602 7.608761 GGACTTATGGACCATGTTACAACTAAA 59.391 37.037 17.73 0.00 0.00 1.85
598 603 8.927675 ACTTATGGACCATGTTACAACTAAAA 57.072 30.769 17.73 0.00 0.00 1.52
599 604 9.010029 ACTTATGGACCATGTTACAACTAAAAG 57.990 33.333 17.73 9.95 0.00 2.27
600 605 8.927675 TTATGGACCATGTTACAACTAAAAGT 57.072 30.769 17.73 0.00 0.00 2.66
601 606 6.870971 TGGACCATGTTACAACTAAAAGTC 57.129 37.500 0.00 0.00 0.00 3.01
602 607 5.766174 TGGACCATGTTACAACTAAAAGTCC 59.234 40.000 0.00 0.00 40.35 3.85
603 608 5.182570 GGACCATGTTACAACTAAAAGTCCC 59.817 44.000 0.00 0.00 35.17 4.46
604 609 5.697067 ACCATGTTACAACTAAAAGTCCCA 58.303 37.500 0.00 0.00 0.00 4.37
605 610 6.130569 ACCATGTTACAACTAAAAGTCCCAA 58.869 36.000 0.00 0.00 0.00 4.12
606 611 6.780522 ACCATGTTACAACTAAAAGTCCCAAT 59.219 34.615 0.00 0.00 0.00 3.16
607 612 7.945664 ACCATGTTACAACTAAAAGTCCCAATA 59.054 33.333 0.00 0.00 0.00 1.90
608 613 8.798402 CCATGTTACAACTAAAAGTCCCAATAA 58.202 33.333 0.00 0.00 0.00 1.40
619 624 9.860898 CTAAAAGTCCCAATAAATTCTTCTTGG 57.139 33.333 0.00 0.00 38.12 3.61
625 630 6.857437 CCAATAAATTCTTCTTGGGGTCTT 57.143 37.500 0.00 0.00 35.91 3.01
626 631 6.867550 CCAATAAATTCTTCTTGGGGTCTTC 58.132 40.000 0.00 0.00 35.91 2.87
627 632 6.665248 CCAATAAATTCTTCTTGGGGTCTTCT 59.335 38.462 0.00 0.00 35.91 2.85
628 633 7.179160 CCAATAAATTCTTCTTGGGGTCTTCTT 59.821 37.037 0.00 0.00 35.91 2.52
629 634 8.588472 CAATAAATTCTTCTTGGGGTCTTCTTT 58.412 33.333 0.00 0.00 0.00 2.52
630 635 6.656632 AAATTCTTCTTGGGGTCTTCTTTC 57.343 37.500 0.00 0.00 0.00 2.62
631 636 4.788925 TTCTTCTTGGGGTCTTCTTTCA 57.211 40.909 0.00 0.00 0.00 2.69
632 637 5.324832 TTCTTCTTGGGGTCTTCTTTCAT 57.675 39.130 0.00 0.00 0.00 2.57
633 638 6.448369 TTCTTCTTGGGGTCTTCTTTCATA 57.552 37.500 0.00 0.00 0.00 2.15
634 639 6.448369 TCTTCTTGGGGTCTTCTTTCATAA 57.552 37.500 0.00 0.00 0.00 1.90
635 640 6.476378 TCTTCTTGGGGTCTTCTTTCATAAG 58.524 40.000 0.00 0.00 0.00 1.73
636 641 5.843019 TCTTGGGGTCTTCTTTCATAAGT 57.157 39.130 0.00 0.00 32.98 2.24
637 642 5.805728 TCTTGGGGTCTTCTTTCATAAGTC 58.194 41.667 0.00 0.00 32.98 3.01
638 643 4.569719 TGGGGTCTTCTTTCATAAGTCC 57.430 45.455 0.00 0.00 33.14 3.85
639 644 3.265995 TGGGGTCTTCTTTCATAAGTCCC 59.734 47.826 8.96 8.96 45.91 4.46
640 645 4.569719 GGGTCTTCTTTCATAAGTCCCA 57.430 45.455 11.65 0.00 45.92 4.37
641 646 4.918588 GGGTCTTCTTTCATAAGTCCCAA 58.081 43.478 11.65 0.00 45.92 4.12
642 647 5.321927 GGGTCTTCTTTCATAAGTCCCAAA 58.678 41.667 11.65 0.00 45.92 3.28
643 648 5.952347 GGGTCTTCTTTCATAAGTCCCAAAT 59.048 40.000 11.65 0.00 45.92 2.32
644 649 6.127619 GGGTCTTCTTTCATAAGTCCCAAATG 60.128 42.308 11.65 0.00 45.92 2.32
645 650 6.325596 GTCTTCTTTCATAAGTCCCAAATGC 58.674 40.000 0.00 0.00 32.98 3.56
646 651 5.418840 TCTTCTTTCATAAGTCCCAAATGCC 59.581 40.000 0.00 0.00 32.98 4.40
647 652 4.023291 TCTTTCATAAGTCCCAAATGCCC 58.977 43.478 0.00 0.00 32.98 5.36
648 653 3.464720 TTCATAAGTCCCAAATGCCCA 57.535 42.857 0.00 0.00 0.00 5.36
649 654 2.733956 TCATAAGTCCCAAATGCCCAC 58.266 47.619 0.00 0.00 0.00 4.61
650 655 2.311542 TCATAAGTCCCAAATGCCCACT 59.688 45.455 0.00 0.00 0.00 4.00
651 656 2.990740 TAAGTCCCAAATGCCCACTT 57.009 45.000 0.00 0.00 0.00 3.16
652 657 2.101640 AAGTCCCAAATGCCCACTTT 57.898 45.000 0.00 0.00 0.00 2.66
653 658 2.990740 AGTCCCAAATGCCCACTTTA 57.009 45.000 0.00 0.00 0.00 1.85
654 659 3.252554 AGTCCCAAATGCCCACTTTAA 57.747 42.857 0.00 0.00 0.00 1.52
655 660 3.582164 AGTCCCAAATGCCCACTTTAAA 58.418 40.909 0.00 0.00 0.00 1.52
656 661 4.167319 AGTCCCAAATGCCCACTTTAAAT 58.833 39.130 0.00 0.00 0.00 1.40
657 662 4.222810 AGTCCCAAATGCCCACTTTAAATC 59.777 41.667 0.00 0.00 0.00 2.17
658 663 3.517500 TCCCAAATGCCCACTTTAAATCC 59.482 43.478 0.00 0.00 0.00 3.01
659 664 3.370421 CCCAAATGCCCACTTTAAATCCC 60.370 47.826 0.00 0.00 0.00 3.85
660 665 3.519107 CCAAATGCCCACTTTAAATCCCT 59.481 43.478 0.00 0.00 0.00 4.20
661 666 4.714308 CCAAATGCCCACTTTAAATCCCTA 59.286 41.667 0.00 0.00 0.00 3.53
662 667 5.366477 CCAAATGCCCACTTTAAATCCCTAT 59.634 40.000 0.00 0.00 0.00 2.57
663 668 6.553100 CCAAATGCCCACTTTAAATCCCTATA 59.447 38.462 0.00 0.00 0.00 1.31
664 669 7.070571 CCAAATGCCCACTTTAAATCCCTATAA 59.929 37.037 0.00 0.00 0.00 0.98
665 670 7.839680 AATGCCCACTTTAAATCCCTATAAG 57.160 36.000 0.00 0.00 0.00 1.73
666 671 6.335781 TGCCCACTTTAAATCCCTATAAGT 57.664 37.500 0.00 0.00 0.00 2.24
667 672 6.362248 TGCCCACTTTAAATCCCTATAAGTC 58.638 40.000 0.00 0.00 0.00 3.01
668 673 5.768662 GCCCACTTTAAATCCCTATAAGTCC 59.231 44.000 0.00 0.00 0.00 3.85
669 674 6.304624 CCCACTTTAAATCCCTATAAGTCCC 58.695 44.000 0.00 0.00 0.00 4.46
670 675 6.102762 CCCACTTTAAATCCCTATAAGTCCCT 59.897 42.308 0.00 0.00 0.00 4.20
671 676 7.225011 CCACTTTAAATCCCTATAAGTCCCTC 58.775 42.308 0.00 0.00 0.00 4.30
672 677 7.147373 CCACTTTAAATCCCTATAAGTCCCTCA 60.147 40.741 0.00 0.00 0.00 3.86
673 678 8.440771 CACTTTAAATCCCTATAAGTCCCTCAT 58.559 37.037 0.00 0.00 0.00 2.90
674 679 8.440771 ACTTTAAATCCCTATAAGTCCCTCATG 58.559 37.037 0.00 0.00 0.00 3.07
675 680 7.947782 TTAAATCCCTATAAGTCCCTCATGT 57.052 36.000 0.00 0.00 0.00 3.21
676 681 6.848562 AAATCCCTATAAGTCCCTCATGTT 57.151 37.500 0.00 0.00 0.00 2.71
677 682 6.848562 AATCCCTATAAGTCCCTCATGTTT 57.151 37.500 0.00 0.00 0.00 2.83
678 683 5.630415 TCCCTATAAGTCCCTCATGTTTG 57.370 43.478 0.00 0.00 0.00 2.93
679 684 4.412199 TCCCTATAAGTCCCTCATGTTTGG 59.588 45.833 0.00 0.00 0.00 3.28
680 685 4.166144 CCCTATAAGTCCCTCATGTTTGGT 59.834 45.833 0.00 0.00 0.00 3.67
681 686 5.340027 CCCTATAAGTCCCTCATGTTTGGTT 60.340 44.000 0.00 0.00 0.00 3.67
682 687 6.126594 CCCTATAAGTCCCTCATGTTTGGTTA 60.127 42.308 0.00 0.00 0.00 2.85
683 688 6.766467 CCTATAAGTCCCTCATGTTTGGTTAC 59.234 42.308 0.00 0.00 0.00 2.50
684 689 4.447138 AAGTCCCTCATGTTTGGTTACA 57.553 40.909 0.00 0.00 0.00 2.41
685 690 3.751518 AGTCCCTCATGTTTGGTTACAC 58.248 45.455 0.00 0.00 0.00 2.90
686 691 2.817844 GTCCCTCATGTTTGGTTACACC 59.182 50.000 0.00 0.00 39.22 4.16
702 707 7.706100 GGTTACACCAATAAATCCCTGTAAA 57.294 36.000 0.00 0.00 38.42 2.01
703 708 7.541162 GGTTACACCAATAAATCCCTGTAAAC 58.459 38.462 0.00 0.00 38.42 2.01
704 709 7.177041 GGTTACACCAATAAATCCCTGTAAACA 59.823 37.037 0.00 0.00 38.42 2.83
705 710 8.578151 GTTACACCAATAAATCCCTGTAAACAA 58.422 33.333 0.00 0.00 0.00 2.83
706 711 7.604657 ACACCAATAAATCCCTGTAAACAAA 57.395 32.000 0.00 0.00 0.00 2.83
707 712 7.438564 ACACCAATAAATCCCTGTAAACAAAC 58.561 34.615 0.00 0.00 0.00 2.93
708 713 7.070074 ACACCAATAAATCCCTGTAAACAAACA 59.930 33.333 0.00 0.00 0.00 2.83
709 714 7.383843 CACCAATAAATCCCTGTAAACAAACAC 59.616 37.037 0.00 0.00 0.00 3.32
710 715 6.871492 CCAATAAATCCCTGTAAACAAACACC 59.129 38.462 0.00 0.00 0.00 4.16
711 716 4.948341 AAATCCCTGTAAACAAACACCC 57.052 40.909 0.00 0.00 0.00 4.61
712 717 2.368311 TCCCTGTAAACAAACACCCC 57.632 50.000 0.00 0.00 0.00 4.95
730 735 5.186198 CACCCCCTTAACATACTTTCTCAG 58.814 45.833 0.00 0.00 0.00 3.35
762 2064 8.885494 TCCAACAATAAGGTCTCAAAAATTTG 57.115 30.769 0.00 0.00 39.48 2.32
763 2065 8.700051 TCCAACAATAAGGTCTCAAAAATTTGA 58.300 29.630 8.21 8.21 44.31 2.69
764 2066 8.764287 CCAACAATAAGGTCTCAAAAATTTGAC 58.236 33.333 4.52 0.00 41.88 3.18
891 2198 3.802948 AGGTTAGTAAGCAGGATGTCG 57.197 47.619 14.21 0.00 39.31 4.35
892 2199 3.097614 AGGTTAGTAAGCAGGATGTCGT 58.902 45.455 14.21 0.00 39.31 4.34
893 2200 4.275810 AGGTTAGTAAGCAGGATGTCGTA 58.724 43.478 14.21 0.00 39.31 3.43
905 2212 5.677936 CAGGATGTCGTAGTCGTAGTATTC 58.322 45.833 0.00 0.00 38.33 1.75
926 2233 2.878406 CCCGAACTGTTGAACTCATGTT 59.122 45.455 0.00 0.00 39.42 2.71
963 2276 2.416260 GCCGTAGAACCCTAGCGG 59.584 66.667 0.00 0.00 39.89 5.52
993 2322 1.481056 CCTCAACCTCCACCTTCCGT 61.481 60.000 0.00 0.00 0.00 4.69
995 2324 1.003718 CAACCTCCACCTTCCGTCC 60.004 63.158 0.00 0.00 0.00 4.79
997 2326 3.400054 CCTCCACCTTCCGTCCCC 61.400 72.222 0.00 0.00 0.00 4.81
998 2327 2.284699 CTCCACCTTCCGTCCCCT 60.285 66.667 0.00 0.00 0.00 4.79
1042 2419 1.198759 CCGTCTCCCCCTTCCTCAAA 61.199 60.000 0.00 0.00 0.00 2.69
1202 2579 2.139118 GTCAACTTCACTCTGCAGGTC 58.861 52.381 15.13 0.00 0.00 3.85
1241 2621 2.413310 TTAGACTCCAAATTCGGGGC 57.587 50.000 0.00 0.00 0.00 5.80
1261 2641 0.747255 TTGCTCTAGGATGCGGTCTC 59.253 55.000 0.00 0.00 0.00 3.36
1309 2701 1.305465 TTCACGGAATCTCGGGGGA 60.305 57.895 0.00 0.00 33.81 4.81
1336 2728 4.031314 CGTCGATTTGTTCTGCGAGATTTA 59.969 41.667 0.00 0.00 33.00 1.40
1337 2729 5.484958 GTCGATTTGTTCTGCGAGATTTAG 58.515 41.667 0.00 0.00 33.00 1.85
1340 2732 3.973206 TTGTTCTGCGAGATTTAGGGA 57.027 42.857 0.00 0.00 0.00 4.20
1341 2733 4.487714 TTGTTCTGCGAGATTTAGGGAT 57.512 40.909 0.00 0.00 0.00 3.85
1342 2734 4.487714 TGTTCTGCGAGATTTAGGGATT 57.512 40.909 0.00 0.00 0.00 3.01
1343 2735 4.843728 TGTTCTGCGAGATTTAGGGATTT 58.156 39.130 0.00 0.00 0.00 2.17
1344 2736 4.635765 TGTTCTGCGAGATTTAGGGATTTG 59.364 41.667 0.00 0.00 0.00 2.32
1345 2737 3.808728 TCTGCGAGATTTAGGGATTTGG 58.191 45.455 0.00 0.00 0.00 3.28
1346 2738 3.199946 TCTGCGAGATTTAGGGATTTGGT 59.800 43.478 0.00 0.00 0.00 3.67
1347 2739 3.947834 CTGCGAGATTTAGGGATTTGGTT 59.052 43.478 0.00 0.00 0.00 3.67
1348 2740 5.104693 TCTGCGAGATTTAGGGATTTGGTTA 60.105 40.000 0.00 0.00 0.00 2.85
1349 2741 4.879545 TGCGAGATTTAGGGATTTGGTTAC 59.120 41.667 0.00 0.00 0.00 2.50
1372 2764 3.969976 TCTTCTTCTCATGGGATGGGTAG 59.030 47.826 8.51 0.00 30.23 3.18
1423 2836 3.184986 GCAGTCATGAAATTTGTTGGTGC 59.815 43.478 0.00 3.04 0.00 5.01
1425 2838 2.730928 GTCATGAAATTTGTTGGTGCCG 59.269 45.455 0.00 0.00 0.00 5.69
1485 2898 7.177184 TGTTCCAGGGATATGATTATTGGATG 58.823 38.462 0.00 0.00 33.63 3.51
1570 2983 6.602406 CAGATTTGAGATGGAAAGACCTGAAT 59.398 38.462 0.00 0.00 39.86 2.57
1589 3002 2.990740 TTTTGGGGGATTGTAGCTGT 57.009 45.000 0.00 0.00 0.00 4.40
1597 3013 5.248477 TGGGGGATTGTAGCTGTTAGATATC 59.752 44.000 0.00 0.00 0.00 1.63
1603 3019 8.682710 GGATTGTAGCTGTTAGATATCTAGGAG 58.317 40.741 12.16 12.44 0.00 3.69
1642 3058 9.680315 CAGTAGTGGAGCAAGTATACTATTTAC 57.320 37.037 5.65 1.87 0.00 2.01
1658 3074 7.941431 ACTATTTACTGATATACTCCCTCCG 57.059 40.000 0.00 0.00 0.00 4.63
1659 3075 7.468496 ACTATTTACTGATATACTCCCTCCGT 58.532 38.462 0.00 0.00 0.00 4.69
1660 3076 7.949006 ACTATTTACTGATATACTCCCTCCGTT 59.051 37.037 0.00 0.00 0.00 4.44
1661 3077 6.645790 TTTACTGATATACTCCCTCCGTTC 57.354 41.667 0.00 0.00 0.00 3.95
1662 3078 3.498334 ACTGATATACTCCCTCCGTTCC 58.502 50.000 0.00 0.00 0.00 3.62
1663 3079 3.117246 ACTGATATACTCCCTCCGTTCCA 60.117 47.826 0.00 0.00 0.00 3.53
1664 3080 3.895656 CTGATATACTCCCTCCGTTCCAA 59.104 47.826 0.00 0.00 0.00 3.53
1665 3081 4.291792 TGATATACTCCCTCCGTTCCAAA 58.708 43.478 0.00 0.00 0.00 3.28
1666 3082 4.905456 TGATATACTCCCTCCGTTCCAAAT 59.095 41.667 0.00 0.00 0.00 2.32
1667 3083 5.368523 TGATATACTCCCTCCGTTCCAAATT 59.631 40.000 0.00 0.00 0.00 1.82
1668 3084 6.555738 TGATATACTCCCTCCGTTCCAAATTA 59.444 38.462 0.00 0.00 0.00 1.40
1669 3085 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
1670 3086 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
1671 3087 3.055312 ACTCCCTCCGTTCCAAATTACTC 60.055 47.826 0.00 0.00 0.00 2.59
1672 3088 2.093869 TCCCTCCGTTCCAAATTACTCG 60.094 50.000 0.00 0.00 0.00 4.18
1673 3089 2.354403 CCCTCCGTTCCAAATTACTCGT 60.354 50.000 0.00 0.00 0.00 4.18
1674 3090 2.928116 CCTCCGTTCCAAATTACTCGTC 59.072 50.000 0.00 0.00 0.00 4.20
1675 3091 2.597305 CTCCGTTCCAAATTACTCGTCG 59.403 50.000 0.00 0.00 0.00 5.12
1676 3092 1.060122 CCGTTCCAAATTACTCGTCGC 59.940 52.381 0.00 0.00 0.00 5.19
1677 3093 1.990563 CGTTCCAAATTACTCGTCGCT 59.009 47.619 0.00 0.00 0.00 4.93
1678 3094 2.222508 CGTTCCAAATTACTCGTCGCTG 60.223 50.000 0.00 0.00 0.00 5.18
1679 3095 2.991190 GTTCCAAATTACTCGTCGCTGA 59.009 45.455 0.00 0.00 0.00 4.26
1680 3096 3.306917 TCCAAATTACTCGTCGCTGAA 57.693 42.857 0.00 0.00 0.00 3.02
1681 3097 3.655486 TCCAAATTACTCGTCGCTGAAA 58.345 40.909 0.00 0.00 0.00 2.69
1682 3098 4.250464 TCCAAATTACTCGTCGCTGAAAT 58.750 39.130 0.00 0.00 0.00 2.17
1683 3099 4.092821 TCCAAATTACTCGTCGCTGAAATG 59.907 41.667 0.00 0.00 0.00 2.32
1684 3100 4.334443 CAAATTACTCGTCGCTGAAATGG 58.666 43.478 0.00 0.00 0.00 3.16
1685 3101 3.520290 ATTACTCGTCGCTGAAATGGA 57.480 42.857 0.00 0.00 0.00 3.41
1686 3102 3.520290 TTACTCGTCGCTGAAATGGAT 57.480 42.857 0.00 0.00 0.00 3.41
1687 3103 1.645034 ACTCGTCGCTGAAATGGATG 58.355 50.000 0.00 0.00 0.00 3.51
1688 3104 1.066858 ACTCGTCGCTGAAATGGATGT 60.067 47.619 0.00 0.00 0.00 3.06
1689 3105 2.165641 ACTCGTCGCTGAAATGGATGTA 59.834 45.455 0.00 0.00 0.00 2.29
1690 3106 3.181475 ACTCGTCGCTGAAATGGATGTAT 60.181 43.478 0.00 0.00 0.00 2.29
1691 3107 3.381045 TCGTCGCTGAAATGGATGTATC 58.619 45.455 0.00 0.00 0.00 2.24
1692 3108 3.068165 TCGTCGCTGAAATGGATGTATCT 59.932 43.478 0.00 0.00 0.00 1.98
1693 3109 4.277423 TCGTCGCTGAAATGGATGTATCTA 59.723 41.667 0.00 0.00 0.00 1.98
1694 3110 4.618912 CGTCGCTGAAATGGATGTATCTAG 59.381 45.833 0.00 0.00 0.00 2.43
1695 3111 5.562890 CGTCGCTGAAATGGATGTATCTAGA 60.563 44.000 0.00 0.00 0.00 2.43
1696 3112 6.216569 GTCGCTGAAATGGATGTATCTAGAA 58.783 40.000 0.00 0.00 0.00 2.10
1697 3113 6.144724 GTCGCTGAAATGGATGTATCTAGAAC 59.855 42.308 0.00 0.00 0.00 3.01
1698 3114 6.040955 TCGCTGAAATGGATGTATCTAGAACT 59.959 38.462 0.00 0.00 0.00 3.01
1699 3115 7.230712 TCGCTGAAATGGATGTATCTAGAACTA 59.769 37.037 0.00 0.00 0.00 2.24
1700 3116 7.867909 CGCTGAAATGGATGTATCTAGAACTAA 59.132 37.037 0.00 0.00 0.00 2.24
1701 3117 9.547753 GCTGAAATGGATGTATCTAGAACTAAA 57.452 33.333 0.00 0.00 0.00 1.85
1728 3144 7.304919 ACATCTAGATACATCCATACGTACG 57.695 40.000 15.01 15.01 0.00 3.67
1729 3145 7.101700 ACATCTAGATACATCCATACGTACGA 58.898 38.462 24.41 6.04 0.00 3.43
1730 3146 6.957984 TCTAGATACATCCATACGTACGAC 57.042 41.667 24.41 0.00 0.00 4.34
1731 3147 6.458210 TCTAGATACATCCATACGTACGACA 58.542 40.000 24.41 9.64 0.00 4.35
1732 3148 6.930722 TCTAGATACATCCATACGTACGACAA 59.069 38.462 24.41 7.24 0.00 3.18
1733 3149 5.998553 AGATACATCCATACGTACGACAAG 58.001 41.667 24.41 7.99 0.00 3.16
1734 3150 5.530171 AGATACATCCATACGTACGACAAGT 59.470 40.000 24.41 12.48 0.00 3.16
1735 3151 6.707608 AGATACATCCATACGTACGACAAGTA 59.292 38.462 24.41 14.12 0.00 2.24
1736 3152 5.565592 ACATCCATACGTACGACAAGTAA 57.434 39.130 24.41 1.13 37.02 2.24
1737 3153 6.140303 ACATCCATACGTACGACAAGTAAT 57.860 37.500 24.41 0.00 37.02 1.89
1738 3154 6.567050 ACATCCATACGTACGACAAGTAATT 58.433 36.000 24.41 0.00 37.02 1.40
1739 3155 6.694411 ACATCCATACGTACGACAAGTAATTC 59.306 38.462 24.41 0.00 37.02 2.17
1740 3156 5.265477 TCCATACGTACGACAAGTAATTCG 58.735 41.667 24.41 0.00 41.14 3.34
1741 3157 4.438797 CCATACGTACGACAAGTAATTCGG 59.561 45.833 24.41 2.22 39.63 4.30
1742 3158 3.829886 ACGTACGACAAGTAATTCGGA 57.170 42.857 24.41 0.00 39.63 4.55
1743 3159 4.159377 ACGTACGACAAGTAATTCGGAA 57.841 40.909 24.41 0.00 39.63 4.30
1744 3160 3.914364 ACGTACGACAAGTAATTCGGAAC 59.086 43.478 24.41 0.00 39.63 3.62
1745 3161 3.002732 CGTACGACAAGTAATTCGGAACG 60.003 47.826 10.44 6.71 46.10 3.95
1746 3162 3.301642 GTACGACAAGTAATTCGGAACGG 59.698 47.826 0.00 0.00 45.22 4.44
1785 3210 5.232463 TCTCGGTGTAATGTTTGTCCTAAC 58.768 41.667 0.00 0.00 0.00 2.34
1861 3286 4.079787 TGAGACATTATTGGGAAGGGGAAG 60.080 45.833 0.00 0.00 0.00 3.46
1870 3295 1.111715 GGAAGGGGAAGGATGCATGC 61.112 60.000 11.82 11.82 0.00 4.06
1918 3343 4.015084 GGCCATTCTCATCATATTGGGAG 58.985 47.826 0.00 0.00 0.00 4.30
1922 3347 3.654146 TCTCATCATATTGGGAGGGGA 57.346 47.619 0.00 0.00 0.00 4.81
2066 3491 1.233019 AGTGTGCACATGACTGCTTC 58.767 50.000 24.69 6.50 38.07 3.86
2281 3708 6.699642 GCTTTGTTTGTATTGAGTTTAGCCAA 59.300 34.615 0.00 0.00 0.00 4.52
2503 3947 3.005684 CCACTGGCTTTCACAAATGCTTA 59.994 43.478 0.00 0.00 36.18 3.09
2720 4174 9.764363 AACAAATACTTGGGAAAAATCTCTTTC 57.236 29.630 0.00 0.00 36.82 2.62
2750 4205 4.534647 AGGTAGGTCAGATGACAGATCT 57.465 45.455 14.52 4.61 46.47 2.75
2751 4206 5.654901 AGGTAGGTCAGATGACAGATCTA 57.345 43.478 14.52 4.36 46.47 1.98
2752 4207 6.212840 AGGTAGGTCAGATGACAGATCTAT 57.787 41.667 14.52 0.00 46.47 1.98
2778 4418 0.884704 TTCTTCGTGCAGTTGGCTCC 60.885 55.000 0.00 0.00 45.15 4.70
2867 4524 0.914644 CATCTGGCTTCCTCCCTGAA 59.085 55.000 0.00 0.00 34.58 3.02
2928 4600 3.457610 ACAGTGGCCAACTCAATTTTG 57.542 42.857 7.24 0.00 36.83 2.44
2929 4601 2.765699 ACAGTGGCCAACTCAATTTTGT 59.234 40.909 7.24 0.00 36.83 2.83
2930 4602 3.197549 ACAGTGGCCAACTCAATTTTGTT 59.802 39.130 7.24 0.00 36.83 2.83
2931 4603 4.190772 CAGTGGCCAACTCAATTTTGTTT 58.809 39.130 7.24 0.00 36.83 2.83
2932 4604 5.105146 ACAGTGGCCAACTCAATTTTGTTTA 60.105 36.000 7.24 0.00 36.83 2.01
2933 4605 5.990996 CAGTGGCCAACTCAATTTTGTTTAT 59.009 36.000 7.24 0.00 36.83 1.40
2934 4606 6.482973 CAGTGGCCAACTCAATTTTGTTTATT 59.517 34.615 7.24 0.00 36.83 1.40
2935 4607 7.655328 CAGTGGCCAACTCAATTTTGTTTATTA 59.345 33.333 7.24 0.00 36.83 0.98
2936 4608 7.655732 AGTGGCCAACTCAATTTTGTTTATTAC 59.344 33.333 7.24 0.00 31.64 1.89
2937 4609 7.439655 GTGGCCAACTCAATTTTGTTTATTACA 59.560 33.333 7.24 0.00 34.12 2.41
2938 4610 8.153550 TGGCCAACTCAATTTTGTTTATTACAT 58.846 29.630 0.61 0.00 36.44 2.29
2939 4611 9.646427 GGCCAACTCAATTTTGTTTATTACATA 57.354 29.630 0.00 0.00 36.44 2.29
2956 4628 2.092212 ACATAATCTGCCCCCAGTTCAG 60.092 50.000 0.00 0.00 40.09 3.02
2961 4633 3.455469 GCCCCCAGTTCAGCATGC 61.455 66.667 10.51 10.51 34.76 4.06
2997 4669 0.036164 ACGGCTGCCTATTTGTCACA 59.964 50.000 17.92 0.00 0.00 3.58
3026 4699 5.594317 AGCCAATTGTGTAGTCAGTCTTTTT 59.406 36.000 4.43 0.00 0.00 1.94
3057 4730 2.372264 GCCTCAAGCATCTGGATCAAA 58.628 47.619 0.00 0.00 42.97 2.69
3058 4731 2.756760 GCCTCAAGCATCTGGATCAAAA 59.243 45.455 0.00 0.00 42.97 2.44
3080 4753 3.261897 ACGATGTCCCTGTGAGATTCTTT 59.738 43.478 0.00 0.00 0.00 2.52
3186 4859 1.005097 TGAATCCATGAGCAGGCAAGT 59.995 47.619 0.00 0.00 0.00 3.16
3198 4871 1.827789 GGCAAGTGACAACCTGGCA 60.828 57.895 0.00 0.00 41.69 4.92
3221 4894 3.754965 ACTGAAACATCTTAGCAGCCAA 58.245 40.909 0.00 0.00 0.00 4.52
3243 4916 6.930722 CCAAAGGAAAAGAAAGCATGTAACAT 59.069 34.615 0.00 0.00 0.00 2.71
3350 5023 3.305964 CTCTGTTCTTTGTGCATTGCTG 58.694 45.455 10.49 0.00 0.00 4.41
3380 5053 5.105756 GGGCATACATTTTCTACACTTTGCT 60.106 40.000 0.00 0.00 0.00 3.91
3471 5147 8.037166 CAGTTAGATAACAGGCAGCATATATCA 58.963 37.037 12.18 0.44 38.62 2.15
3473 5149 6.617782 AGATAACAGGCAGCATATATCAGT 57.382 37.500 12.18 0.00 0.00 3.41
3537 5217 5.736951 ATGTCTAAGCTGAGATGTATCCC 57.263 43.478 3.44 0.00 0.00 3.85
3763 5452 2.969300 TTCCCCGGCTCGTTTTTGCT 62.969 55.000 0.00 0.00 0.00 3.91
3817 5506 4.393062 GCAACACTAGTGTAACATGAGCAT 59.607 41.667 28.13 6.32 44.13 3.79
3844 5537 3.102972 TCCATGAGAAGTCCAGAGAAGG 58.897 50.000 0.00 0.00 0.00 3.46
4091 5831 8.383619 CAAACCAAACAAATTTCGACATGTAAA 58.616 29.630 0.00 0.00 0.00 2.01
4163 6065 2.031516 CCAACTCAGTCAGCAGCGG 61.032 63.158 0.00 0.00 0.00 5.52
4164 6066 2.358003 AACTCAGTCAGCAGCGGC 60.358 61.111 0.00 0.00 41.61 6.53
4165 6067 3.169155 AACTCAGTCAGCAGCGGCA 62.169 57.895 12.44 0.00 44.61 5.69
4166 6068 3.117171 CTCAGTCAGCAGCGGCAC 61.117 66.667 12.44 0.81 44.61 5.01
4167 6069 3.871248 CTCAGTCAGCAGCGGCACA 62.871 63.158 12.44 0.00 44.61 4.57
4168 6070 3.720193 CAGTCAGCAGCGGCACAC 61.720 66.667 12.44 6.84 44.61 3.82
4169 6071 4.996434 AGTCAGCAGCGGCACACC 62.996 66.667 12.44 0.00 44.61 4.16
4171 6073 4.334118 TCAGCAGCGGCACACCAT 62.334 61.111 12.44 0.00 44.61 3.55
4172 6074 3.807538 CAGCAGCGGCACACCATC 61.808 66.667 12.44 0.00 44.61 3.51
4203 6110 1.207791 CAACAGATGCCCCCTACTCT 58.792 55.000 0.00 0.00 0.00 3.24
4286 6202 4.824515 CCGGCGTCTCCTCCTCCT 62.825 72.222 6.01 0.00 0.00 3.69
4287 6203 3.213402 CGGCGTCTCCTCCTCCTC 61.213 72.222 0.00 0.00 0.00 3.71
4288 6204 3.213402 GGCGTCTCCTCCTCCTCG 61.213 72.222 0.00 0.00 0.00 4.63
4289 6205 2.438795 GCGTCTCCTCCTCCTCGT 60.439 66.667 0.00 0.00 0.00 4.18
4290 6206 2.474612 GCGTCTCCTCCTCCTCGTC 61.475 68.421 0.00 0.00 0.00 4.20
4291 6207 1.820481 CGTCTCCTCCTCCTCGTCC 60.820 68.421 0.00 0.00 0.00 4.79
4864 6781 2.933287 ACGATGGTTGCCCAGGGA 60.933 61.111 10.89 0.00 46.15 4.20
4903 6820 3.071457 TCACTCTGATCAGTTTCTTGCCA 59.929 43.478 21.92 0.00 0.00 4.92
4928 6845 1.993653 CAGGGGCAGGAATGTCTCA 59.006 57.895 0.00 0.00 0.00 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 2.125350 CTCTCACTGCCTTCGCCC 60.125 66.667 0.00 0.00 0.00 6.13
83 84 2.149578 ACATTGAAGACTGCTCAGTGC 58.850 47.619 7.33 0.02 42.66 4.40
84 85 3.811497 TCAACATTGAAGACTGCTCAGTG 59.189 43.478 7.33 0.00 36.60 3.66
85 86 4.063689 CTCAACATTGAAGACTGCTCAGT 58.936 43.478 1.62 1.62 39.62 3.41
92 94 1.160137 GCCGCTCAACATTGAAGACT 58.840 50.000 0.00 0.00 36.64 3.24
232 234 0.986527 GAGGGGAGGGGTTTTTACGA 59.013 55.000 0.00 0.00 0.00 3.43
235 237 1.132003 TGAGGAGGGGAGGGGTTTTTA 60.132 52.381 0.00 0.00 0.00 1.52
240 242 2.138236 AACATGAGGAGGGGAGGGGT 62.138 60.000 0.00 0.00 0.00 4.95
256 259 4.155099 TCTCTCGCAAACTGAAAACAAACA 59.845 37.500 0.00 0.00 0.00 2.83
275 278 0.888619 TGTCCAGACGCGATTTCTCT 59.111 50.000 15.93 0.42 0.00 3.10
299 302 1.671979 CGGGTCTGTATCGGTCAGTA 58.328 55.000 0.00 0.00 34.86 2.74
300 303 1.664321 GCGGGTCTGTATCGGTCAGT 61.664 60.000 0.00 0.00 34.86 3.41
351 354 2.047655 TTTCGCTTGCGTCCGGAT 60.048 55.556 7.81 0.00 0.00 4.18
455 459 9.914834 ACAAATGTGGCCTAAGTATAGAAAATA 57.085 29.630 3.32 0.00 0.00 1.40
460 465 7.398829 TGAAACAAATGTGGCCTAAGTATAGA 58.601 34.615 3.32 0.00 0.00 1.98
461 466 7.624360 TGAAACAAATGTGGCCTAAGTATAG 57.376 36.000 3.32 0.00 0.00 1.31
462 467 9.688091 TTATGAAACAAATGTGGCCTAAGTATA 57.312 29.630 3.32 0.00 0.00 1.47
463 468 8.588290 TTATGAAACAAATGTGGCCTAAGTAT 57.412 30.769 3.32 0.00 0.00 2.12
464 469 7.668052 ACTTATGAAACAAATGTGGCCTAAGTA 59.332 33.333 3.32 0.00 30.11 2.24
465 470 6.493458 ACTTATGAAACAAATGTGGCCTAAGT 59.507 34.615 3.32 1.67 0.00 2.24
466 471 6.924111 ACTTATGAAACAAATGTGGCCTAAG 58.076 36.000 3.32 0.98 0.00 2.18
467 472 6.071616 GGACTTATGAAACAAATGTGGCCTAA 60.072 38.462 3.32 0.00 0.00 2.69
468 473 5.417580 GGACTTATGAAACAAATGTGGCCTA 59.582 40.000 3.32 0.00 0.00 3.93
469 474 4.220602 GGACTTATGAAACAAATGTGGCCT 59.779 41.667 3.32 0.00 0.00 5.19
470 475 4.220602 AGGACTTATGAAACAAATGTGGCC 59.779 41.667 0.00 0.00 0.00 5.36
471 476 5.391312 AGGACTTATGAAACAAATGTGGC 57.609 39.130 0.00 0.00 0.00 5.01
472 477 6.884295 TCCTAGGACTTATGAAACAAATGTGG 59.116 38.462 7.62 0.00 0.00 4.17
473 478 7.752695 GTCCTAGGACTTATGAAACAAATGTG 58.247 38.462 31.12 0.00 41.57 3.21
474 479 7.923414 GTCCTAGGACTTATGAAACAAATGT 57.077 36.000 31.12 0.00 41.57 2.71
503 508 4.964593 AGCGACTTTTTAGTTGGGACTAA 58.035 39.130 0.00 0.00 44.49 2.24
504 509 4.612264 AGCGACTTTTTAGTTGGGACTA 57.388 40.909 0.00 0.00 37.33 2.59
505 510 3.487120 AGCGACTTTTTAGTTGGGACT 57.513 42.857 0.00 0.00 39.97 3.85
506 511 4.313282 ACTAGCGACTTTTTAGTTGGGAC 58.687 43.478 0.00 0.00 0.00 4.46
507 512 4.562143 GGACTAGCGACTTTTTAGTTGGGA 60.562 45.833 0.00 0.00 0.00 4.37
508 513 3.683340 GGACTAGCGACTTTTTAGTTGGG 59.317 47.826 0.00 0.00 0.00 4.12
509 514 3.683340 GGGACTAGCGACTTTTTAGTTGG 59.317 47.826 0.00 0.00 0.00 3.77
510 515 4.566987 AGGGACTAGCGACTTTTTAGTTG 58.433 43.478 0.00 0.00 36.02 3.16
511 516 4.886496 AGGGACTAGCGACTTTTTAGTT 57.114 40.909 0.00 0.00 36.02 2.24
512 517 5.990120 TTAGGGACTAGCGACTTTTTAGT 57.010 39.130 0.00 0.00 44.25 2.24
513 518 7.387122 ACTTTTTAGGGACTAGCGACTTTTTAG 59.613 37.037 0.00 0.00 44.25 1.85
514 519 7.219322 ACTTTTTAGGGACTAGCGACTTTTTA 58.781 34.615 0.00 0.00 44.25 1.52
515 520 6.060136 ACTTTTTAGGGACTAGCGACTTTTT 58.940 36.000 0.00 0.00 44.25 1.94
516 521 5.618236 ACTTTTTAGGGACTAGCGACTTTT 58.382 37.500 0.00 0.00 44.25 2.27
517 522 5.224821 ACTTTTTAGGGACTAGCGACTTT 57.775 39.130 0.00 0.00 44.25 2.66
518 523 4.322574 GGACTTTTTAGGGACTAGCGACTT 60.323 45.833 0.00 0.00 44.25 3.01
519 524 3.195182 GGACTTTTTAGGGACTAGCGACT 59.805 47.826 0.00 0.00 44.25 4.18
520 525 3.519579 GGACTTTTTAGGGACTAGCGAC 58.480 50.000 0.00 0.00 44.25 5.19
521 526 2.498885 GGGACTTTTTAGGGACTAGCGA 59.501 50.000 0.00 0.00 44.25 4.93
522 527 2.500504 AGGGACTTTTTAGGGACTAGCG 59.499 50.000 0.00 0.00 37.71 4.26
523 528 5.890752 ATAGGGACTTTTTAGGGACTAGC 57.109 43.478 0.00 0.00 41.09 3.42
524 529 7.631007 ACAAATAGGGACTTTTTAGGGACTAG 58.369 38.462 0.00 0.00 41.09 2.57
525 530 7.578458 ACAAATAGGGACTTTTTAGGGACTA 57.422 36.000 0.00 0.00 37.50 2.59
526 531 6.464530 ACAAATAGGGACTTTTTAGGGACT 57.535 37.500 0.00 0.00 37.50 3.85
527 532 7.375834 CAAACAAATAGGGACTTTTTAGGGAC 58.624 38.462 0.00 0.00 37.50 4.46
528 533 6.495526 CCAAACAAATAGGGACTTTTTAGGGA 59.504 38.462 0.00 0.00 37.50 4.20
529 534 6.269077 ACCAAACAAATAGGGACTTTTTAGGG 59.731 38.462 0.00 0.00 37.50 3.53
530 535 7.297936 ACCAAACAAATAGGGACTTTTTAGG 57.702 36.000 0.00 0.00 37.50 2.69
531 536 8.417884 TGAACCAAACAAATAGGGACTTTTTAG 58.582 33.333 0.00 0.00 37.50 1.85
532 537 8.307582 TGAACCAAACAAATAGGGACTTTTTA 57.692 30.769 0.00 0.00 37.50 1.52
533 538 7.189079 TGAACCAAACAAATAGGGACTTTTT 57.811 32.000 0.00 0.00 40.06 1.94
534 539 6.800072 TGAACCAAACAAATAGGGACTTTT 57.200 33.333 0.00 0.00 41.75 2.27
535 540 6.239572 CCATGAACCAAACAAATAGGGACTTT 60.240 38.462 0.00 0.00 41.75 2.66
536 541 5.245977 CCATGAACCAAACAAATAGGGACTT 59.754 40.000 0.00 0.00 41.75 3.01
537 542 4.772100 CCATGAACCAAACAAATAGGGACT 59.228 41.667 0.00 0.00 46.37 3.85
538 543 4.081697 CCCATGAACCAAACAAATAGGGAC 60.082 45.833 0.00 0.00 34.49 4.46
539 544 4.093011 CCCATGAACCAAACAAATAGGGA 58.907 43.478 0.00 0.00 34.49 4.20
540 545 4.081697 GTCCCATGAACCAAACAAATAGGG 60.082 45.833 0.00 0.00 0.00 3.53
541 546 4.772100 AGTCCCATGAACCAAACAAATAGG 59.228 41.667 0.00 0.00 0.00 2.57
542 547 5.982890 AGTCCCATGAACCAAACAAATAG 57.017 39.130 0.00 0.00 0.00 1.73
543 548 7.287927 TGTTTAGTCCCATGAACCAAACAAATA 59.712 33.333 16.44 1.74 33.02 1.40
544 549 6.098982 TGTTTAGTCCCATGAACCAAACAAAT 59.901 34.615 16.44 0.00 33.02 2.32
545 550 5.422331 TGTTTAGTCCCATGAACCAAACAAA 59.578 36.000 16.44 2.48 33.02 2.83
546 551 4.956700 TGTTTAGTCCCATGAACCAAACAA 59.043 37.500 16.44 6.47 33.02 2.83
547 552 4.537751 TGTTTAGTCCCATGAACCAAACA 58.462 39.130 15.48 15.48 33.40 2.83
548 553 5.469479 CATGTTTAGTCCCATGAACCAAAC 58.531 41.667 12.10 12.10 40.70 2.93
549 554 4.526262 CCATGTTTAGTCCCATGAACCAAA 59.474 41.667 0.00 0.00 40.70 3.28
550 555 4.085733 CCATGTTTAGTCCCATGAACCAA 58.914 43.478 0.00 0.00 40.70 3.67
551 556 3.332187 TCCATGTTTAGTCCCATGAACCA 59.668 43.478 0.00 0.00 40.70 3.67
552 557 3.694566 GTCCATGTTTAGTCCCATGAACC 59.305 47.826 0.00 0.00 40.70 3.62
553 558 4.589908 AGTCCATGTTTAGTCCCATGAAC 58.410 43.478 0.00 0.00 40.70 3.18
554 559 4.927267 AGTCCATGTTTAGTCCCATGAA 57.073 40.909 0.00 0.00 40.70 2.57
555 560 4.927267 AAGTCCATGTTTAGTCCCATGA 57.073 40.909 0.00 0.00 40.70 3.07
556 561 5.532406 CCATAAGTCCATGTTTAGTCCCATG 59.468 44.000 0.00 0.00 38.51 3.66
557 562 5.431731 TCCATAAGTCCATGTTTAGTCCCAT 59.568 40.000 0.00 0.00 0.00 4.00
558 563 4.785914 TCCATAAGTCCATGTTTAGTCCCA 59.214 41.667 0.00 0.00 0.00 4.37
559 564 5.123936 GTCCATAAGTCCATGTTTAGTCCC 58.876 45.833 0.00 0.00 0.00 4.46
560 565 5.123936 GGTCCATAAGTCCATGTTTAGTCC 58.876 45.833 0.00 0.00 0.00 3.85
561 566 5.741011 TGGTCCATAAGTCCATGTTTAGTC 58.259 41.667 0.00 0.00 0.00 2.59
562 567 5.772393 TGGTCCATAAGTCCATGTTTAGT 57.228 39.130 0.00 0.00 0.00 2.24
569 574 5.708736 TGTAACATGGTCCATAAGTCCAT 57.291 39.130 3.38 0.00 41.88 3.41
570 575 5.013704 AGTTGTAACATGGTCCATAAGTCCA 59.986 40.000 3.38 0.00 35.64 4.02
571 576 5.497474 AGTTGTAACATGGTCCATAAGTCC 58.503 41.667 3.38 0.00 0.00 3.85
572 577 8.556213 TTTAGTTGTAACATGGTCCATAAGTC 57.444 34.615 3.38 0.00 0.00 3.01
573 578 8.927675 TTTTAGTTGTAACATGGTCCATAAGT 57.072 30.769 3.38 0.60 0.00 2.24
574 579 9.010029 ACTTTTAGTTGTAACATGGTCCATAAG 57.990 33.333 3.38 2.79 0.00 1.73
575 580 8.927675 ACTTTTAGTTGTAACATGGTCCATAA 57.072 30.769 3.38 0.00 0.00 1.90
576 581 7.608761 GGACTTTTAGTTGTAACATGGTCCATA 59.391 37.037 3.38 0.00 39.20 2.74
577 582 6.433093 GGACTTTTAGTTGTAACATGGTCCAT 59.567 38.462 0.00 0.00 39.20 3.41
578 583 5.766174 GGACTTTTAGTTGTAACATGGTCCA 59.234 40.000 0.00 0.00 39.20 4.02
579 584 5.182570 GGGACTTTTAGTTGTAACATGGTCC 59.817 44.000 0.00 0.00 38.82 4.46
580 585 5.766174 TGGGACTTTTAGTTGTAACATGGTC 59.234 40.000 0.00 0.00 0.00 4.02
581 586 5.697067 TGGGACTTTTAGTTGTAACATGGT 58.303 37.500 0.00 0.00 0.00 3.55
582 587 6.642707 TTGGGACTTTTAGTTGTAACATGG 57.357 37.500 0.00 0.00 0.00 3.66
593 598 9.860898 CCAAGAAGAATTTATTGGGACTTTTAG 57.139 33.333 5.92 0.00 46.89 1.85
603 608 7.709149 AGAAGACCCCAAGAAGAATTTATTG 57.291 36.000 0.00 0.00 35.73 1.90
604 609 8.727100 AAAGAAGACCCCAAGAAGAATTTATT 57.273 30.769 0.00 0.00 0.00 1.40
605 610 7.950124 TGAAAGAAGACCCCAAGAAGAATTTAT 59.050 33.333 0.00 0.00 0.00 1.40
606 611 7.294584 TGAAAGAAGACCCCAAGAAGAATTTA 58.705 34.615 0.00 0.00 0.00 1.40
607 612 6.136155 TGAAAGAAGACCCCAAGAAGAATTT 58.864 36.000 0.00 0.00 0.00 1.82
608 613 5.705400 TGAAAGAAGACCCCAAGAAGAATT 58.295 37.500 0.00 0.00 0.00 2.17
609 614 5.324832 TGAAAGAAGACCCCAAGAAGAAT 57.675 39.130 0.00 0.00 0.00 2.40
610 615 4.788925 TGAAAGAAGACCCCAAGAAGAA 57.211 40.909 0.00 0.00 0.00 2.52
611 616 6.044404 ACTTATGAAAGAAGACCCCAAGAAGA 59.956 38.462 0.00 0.00 36.50 2.87
612 617 6.241645 ACTTATGAAAGAAGACCCCAAGAAG 58.758 40.000 0.00 0.00 36.50 2.85
613 618 6.200878 ACTTATGAAAGAAGACCCCAAGAA 57.799 37.500 0.00 0.00 36.50 2.52
614 619 5.280521 GGACTTATGAAAGAAGACCCCAAGA 60.281 44.000 0.00 0.00 34.05 3.02
615 620 4.944317 GGACTTATGAAAGAAGACCCCAAG 59.056 45.833 0.00 0.00 34.05 3.61
616 621 4.263771 GGGACTTATGAAAGAAGACCCCAA 60.264 45.833 9.99 0.00 46.84 4.12
617 622 3.265995 GGGACTTATGAAAGAAGACCCCA 59.734 47.826 9.99 0.00 46.84 4.96
618 623 3.887352 GGGACTTATGAAAGAAGACCCC 58.113 50.000 9.99 6.16 46.84 4.95
620 625 6.625960 GCATTTGGGACTTATGAAAGAAGACC 60.626 42.308 0.00 0.00 37.82 3.85
621 626 6.325596 GCATTTGGGACTTATGAAAGAAGAC 58.674 40.000 0.00 0.00 36.50 3.01
622 627 5.418840 GGCATTTGGGACTTATGAAAGAAGA 59.581 40.000 0.00 0.00 36.50 2.87
623 628 5.394553 GGGCATTTGGGACTTATGAAAGAAG 60.395 44.000 0.00 0.00 36.50 2.85
624 629 4.466015 GGGCATTTGGGACTTATGAAAGAA 59.534 41.667 0.00 0.00 36.50 2.52
625 630 4.023291 GGGCATTTGGGACTTATGAAAGA 58.977 43.478 0.00 0.00 36.50 2.52
626 631 3.768757 TGGGCATTTGGGACTTATGAAAG 59.231 43.478 0.00 0.00 38.77 2.62
627 632 3.513515 GTGGGCATTTGGGACTTATGAAA 59.486 43.478 0.00 0.00 0.00 2.69
628 633 3.096092 GTGGGCATTTGGGACTTATGAA 58.904 45.455 0.00 0.00 0.00 2.57
629 634 2.311542 AGTGGGCATTTGGGACTTATGA 59.688 45.455 0.00 0.00 0.00 2.15
630 635 2.738743 AGTGGGCATTTGGGACTTATG 58.261 47.619 0.00 0.00 0.00 1.90
631 636 3.473113 AAGTGGGCATTTGGGACTTAT 57.527 42.857 0.00 0.00 0.00 1.73
632 637 2.990740 AAGTGGGCATTTGGGACTTA 57.009 45.000 0.00 0.00 0.00 2.24
633 638 2.101640 AAAGTGGGCATTTGGGACTT 57.898 45.000 0.00 0.00 0.00 3.01
634 639 2.990740 TAAAGTGGGCATTTGGGACT 57.009 45.000 0.00 0.00 0.00 3.85
635 640 4.503910 GATTTAAAGTGGGCATTTGGGAC 58.496 43.478 0.00 0.00 0.00 4.46
636 641 3.517500 GGATTTAAAGTGGGCATTTGGGA 59.482 43.478 0.00 0.00 0.00 4.37
637 642 3.370421 GGGATTTAAAGTGGGCATTTGGG 60.370 47.826 0.00 0.00 0.00 4.12
638 643 3.519107 AGGGATTTAAAGTGGGCATTTGG 59.481 43.478 0.00 0.00 0.00 3.28
639 644 4.824479 AGGGATTTAAAGTGGGCATTTG 57.176 40.909 0.00 0.00 0.00 2.32
640 645 7.844269 ACTTATAGGGATTTAAAGTGGGCATTT 59.156 33.333 0.00 0.00 0.00 2.32
641 646 7.362234 ACTTATAGGGATTTAAAGTGGGCATT 58.638 34.615 0.00 0.00 0.00 3.56
642 647 6.922540 ACTTATAGGGATTTAAAGTGGGCAT 58.077 36.000 0.00 0.00 0.00 4.40
643 648 6.335781 ACTTATAGGGATTTAAAGTGGGCA 57.664 37.500 0.00 0.00 0.00 5.36
644 649 5.768662 GGACTTATAGGGATTTAAAGTGGGC 59.231 44.000 0.00 0.00 30.83 5.36
645 650 6.102762 AGGGACTTATAGGGATTTAAAGTGGG 59.897 42.308 0.00 0.00 27.25 4.61
646 651 7.147373 TGAGGGACTTATAGGGATTTAAAGTGG 60.147 40.741 0.00 0.00 41.55 4.00
647 652 7.802117 TGAGGGACTTATAGGGATTTAAAGTG 58.198 38.462 0.00 0.00 41.55 3.16
648 653 8.440771 CATGAGGGACTTATAGGGATTTAAAGT 58.559 37.037 0.00 0.00 41.55 2.66
649 654 8.440771 ACATGAGGGACTTATAGGGATTTAAAG 58.559 37.037 0.00 0.00 41.55 1.85
650 655 8.344939 ACATGAGGGACTTATAGGGATTTAAA 57.655 34.615 0.00 0.00 41.55 1.52
651 656 7.947782 ACATGAGGGACTTATAGGGATTTAA 57.052 36.000 0.00 0.00 41.55 1.52
652 657 7.947782 AACATGAGGGACTTATAGGGATTTA 57.052 36.000 0.00 0.00 41.55 1.40
653 658 6.848562 AACATGAGGGACTTATAGGGATTT 57.151 37.500 0.00 0.00 41.55 2.17
654 659 6.410853 CCAAACATGAGGGACTTATAGGGATT 60.411 42.308 0.00 0.00 41.55 3.01
655 660 5.073691 CCAAACATGAGGGACTTATAGGGAT 59.926 44.000 0.00 0.00 41.55 3.85
656 661 4.412199 CCAAACATGAGGGACTTATAGGGA 59.588 45.833 0.00 0.00 41.55 4.20
657 662 4.166144 ACCAAACATGAGGGACTTATAGGG 59.834 45.833 0.00 0.00 41.55 3.53
658 663 5.373812 ACCAAACATGAGGGACTTATAGG 57.626 43.478 0.00 0.00 41.55 2.57
659 664 7.280205 GTGTAACCAAACATGAGGGACTTATAG 59.720 40.741 0.00 0.00 41.55 1.31
660 665 7.107542 GTGTAACCAAACATGAGGGACTTATA 58.892 38.462 0.00 0.00 41.55 0.98
661 666 5.944007 GTGTAACCAAACATGAGGGACTTAT 59.056 40.000 0.00 0.00 41.55 1.73
662 667 5.310451 GTGTAACCAAACATGAGGGACTTA 58.690 41.667 0.00 0.00 41.55 2.24
663 668 4.142038 GTGTAACCAAACATGAGGGACTT 58.858 43.478 0.00 0.00 41.55 3.01
679 684 8.113173 TGTTTACAGGGATTTATTGGTGTAAC 57.887 34.615 0.00 0.00 31.79 2.50
680 685 8.707796 TTGTTTACAGGGATTTATTGGTGTAA 57.292 30.769 0.00 0.00 0.00 2.41
681 686 8.578151 GTTTGTTTACAGGGATTTATTGGTGTA 58.422 33.333 0.00 0.00 0.00 2.90
682 687 7.070074 TGTTTGTTTACAGGGATTTATTGGTGT 59.930 33.333 0.00 0.00 0.00 4.16
683 688 7.383843 GTGTTTGTTTACAGGGATTTATTGGTG 59.616 37.037 0.00 0.00 0.00 4.17
684 689 7.438564 GTGTTTGTTTACAGGGATTTATTGGT 58.561 34.615 0.00 0.00 0.00 3.67
685 690 6.871492 GGTGTTTGTTTACAGGGATTTATTGG 59.129 38.462 0.00 0.00 0.00 3.16
686 691 6.871492 GGGTGTTTGTTTACAGGGATTTATTG 59.129 38.462 0.00 0.00 0.00 1.90
687 692 6.014070 GGGGTGTTTGTTTACAGGGATTTATT 60.014 38.462 0.00 0.00 0.00 1.40
688 693 5.482526 GGGGTGTTTGTTTACAGGGATTTAT 59.517 40.000 0.00 0.00 0.00 1.40
689 694 4.833938 GGGGTGTTTGTTTACAGGGATTTA 59.166 41.667 0.00 0.00 0.00 1.40
690 695 3.644265 GGGGTGTTTGTTTACAGGGATTT 59.356 43.478 0.00 0.00 0.00 2.17
691 696 3.236047 GGGGTGTTTGTTTACAGGGATT 58.764 45.455 0.00 0.00 0.00 3.01
692 697 2.492010 GGGGGTGTTTGTTTACAGGGAT 60.492 50.000 0.00 0.00 0.00 3.85
693 698 1.133419 GGGGGTGTTTGTTTACAGGGA 60.133 52.381 0.00 0.00 0.00 4.20
694 699 1.133294 AGGGGGTGTTTGTTTACAGGG 60.133 52.381 0.00 0.00 0.00 4.45
695 700 2.375014 AGGGGGTGTTTGTTTACAGG 57.625 50.000 0.00 0.00 0.00 4.00
696 701 4.645588 TGTTAAGGGGGTGTTTGTTTACAG 59.354 41.667 0.00 0.00 0.00 2.74
697 702 4.607239 TGTTAAGGGGGTGTTTGTTTACA 58.393 39.130 0.00 0.00 0.00 2.41
698 703 5.794726 ATGTTAAGGGGGTGTTTGTTTAC 57.205 39.130 0.00 0.00 0.00 2.01
699 704 6.612741 AGTATGTTAAGGGGGTGTTTGTTTA 58.387 36.000 0.00 0.00 0.00 2.01
700 705 5.460416 AGTATGTTAAGGGGGTGTTTGTTT 58.540 37.500 0.00 0.00 0.00 2.83
701 706 5.069518 AGTATGTTAAGGGGGTGTTTGTT 57.930 39.130 0.00 0.00 0.00 2.83
702 707 4.734843 AGTATGTTAAGGGGGTGTTTGT 57.265 40.909 0.00 0.00 0.00 2.83
703 708 5.773176 AGAAAGTATGTTAAGGGGGTGTTTG 59.227 40.000 0.00 0.00 0.00 2.93
704 709 5.960704 AGAAAGTATGTTAAGGGGGTGTTT 58.039 37.500 0.00 0.00 0.00 2.83
705 710 5.073965 TGAGAAAGTATGTTAAGGGGGTGTT 59.926 40.000 0.00 0.00 0.00 3.32
706 711 4.600111 TGAGAAAGTATGTTAAGGGGGTGT 59.400 41.667 0.00 0.00 0.00 4.16
707 712 5.045869 TCTGAGAAAGTATGTTAAGGGGGTG 60.046 44.000 0.00 0.00 0.00 4.61
708 713 5.098663 TCTGAGAAAGTATGTTAAGGGGGT 58.901 41.667 0.00 0.00 0.00 4.95
709 714 5.693769 TCTGAGAAAGTATGTTAAGGGGG 57.306 43.478 0.00 0.00 0.00 5.40
710 715 9.681062 TTTATTCTGAGAAAGTATGTTAAGGGG 57.319 33.333 0.00 0.00 0.00 4.79
757 2059 7.812648 CAATTTTGCAAGATGATGGTCAAATT 58.187 30.769 2.81 0.00 0.00 1.82
758 2060 7.372451 CAATTTTGCAAGATGATGGTCAAAT 57.628 32.000 2.81 0.00 0.00 2.32
815 2121 9.875691 GCCTGTTTTTGGAATTAATAAGAATCT 57.124 29.630 0.00 0.00 0.00 2.40
816 2122 8.807581 CGCCTGTTTTTGGAATTAATAAGAATC 58.192 33.333 0.00 0.00 0.00 2.52
817 2123 8.527810 TCGCCTGTTTTTGGAATTAATAAGAAT 58.472 29.630 0.00 0.00 0.00 2.40
820 2126 7.759433 ACATCGCCTGTTTTTGGAATTAATAAG 59.241 33.333 0.00 0.00 32.90 1.73
822 2128 7.122055 AGACATCGCCTGTTTTTGGAATTAATA 59.878 33.333 0.00 0.00 38.54 0.98
823 2129 6.036577 ACATCGCCTGTTTTTGGAATTAAT 57.963 33.333 0.00 0.00 32.90 1.40
891 2198 4.333926 ACAGTTCGGGAATACTACGACTAC 59.666 45.833 0.00 0.00 36.24 2.73
892 2199 4.517285 ACAGTTCGGGAATACTACGACTA 58.483 43.478 0.00 0.00 36.24 2.59
893 2200 3.350833 ACAGTTCGGGAATACTACGACT 58.649 45.455 0.00 0.00 36.24 4.18
905 2212 2.494059 ACATGAGTTCAACAGTTCGGG 58.506 47.619 0.00 0.00 0.00 5.14
926 2233 2.429930 CTGCAGAACCCGAACCCA 59.570 61.111 8.42 0.00 0.00 4.51
963 2276 3.017442 GGAGGTTGAGGGTTTAATGAGC 58.983 50.000 0.00 0.00 0.00 4.26
1025 2402 0.328592 GGTTTGAGGAAGGGGGAGAC 59.671 60.000 0.00 0.00 0.00 3.36
1042 2419 1.241315 CGATTTGGTTCCGGCTTGGT 61.241 55.000 0.00 0.00 39.52 3.67
1221 2601 2.509964 AGCCCCGAATTTGGAGTCTAAT 59.490 45.455 13.85 0.00 0.00 1.73
1241 2621 0.749649 AGACCGCATCCTAGAGCAAG 59.250 55.000 0.00 0.00 0.00 4.01
1309 2701 2.734606 TCGCAGAACAAATCGACGAATT 59.265 40.909 0.00 0.00 37.33 2.17
1336 2728 5.548056 TGAGAAGAAGAGTAACCAAATCCCT 59.452 40.000 0.00 0.00 0.00 4.20
1337 2729 5.805728 TGAGAAGAAGAGTAACCAAATCCC 58.194 41.667 0.00 0.00 0.00 3.85
1340 2732 6.012508 TCCCATGAGAAGAAGAGTAACCAAAT 60.013 38.462 0.00 0.00 0.00 2.32
1341 2733 5.309543 TCCCATGAGAAGAAGAGTAACCAAA 59.690 40.000 0.00 0.00 0.00 3.28
1342 2734 4.844085 TCCCATGAGAAGAAGAGTAACCAA 59.156 41.667 0.00 0.00 0.00 3.67
1343 2735 4.425772 TCCCATGAGAAGAAGAGTAACCA 58.574 43.478 0.00 0.00 0.00 3.67
1344 2736 5.363939 CATCCCATGAGAAGAAGAGTAACC 58.636 45.833 0.00 0.00 0.00 2.85
1345 2737 5.363939 CCATCCCATGAGAAGAAGAGTAAC 58.636 45.833 0.00 0.00 0.00 2.50
1346 2738 4.410228 CCCATCCCATGAGAAGAAGAGTAA 59.590 45.833 0.00 0.00 0.00 2.24
1347 2739 3.969976 CCCATCCCATGAGAAGAAGAGTA 59.030 47.826 0.00 0.00 0.00 2.59
1348 2740 2.776536 CCCATCCCATGAGAAGAAGAGT 59.223 50.000 0.00 0.00 0.00 3.24
1349 2741 2.776536 ACCCATCCCATGAGAAGAAGAG 59.223 50.000 0.00 0.00 0.00 2.85
1372 2764 1.040339 AGCATCCTCCGTCCTGAGAC 61.040 60.000 0.00 0.00 39.83 3.36
1425 2838 1.084370 ATTAGACTGCGGCGCAACTC 61.084 55.000 35.41 29.08 38.41 3.01
1485 2898 5.472137 TGAACTACATTAGAACAACCCAAGC 59.528 40.000 0.00 0.00 0.00 4.01
1570 2983 2.990740 ACAGCTACAATCCCCCAAAA 57.009 45.000 0.00 0.00 0.00 2.44
1589 3002 9.080097 GGCTTACTGAAACTCCTAGATATCTAA 57.920 37.037 13.41 0.00 0.00 2.10
1597 3013 3.515901 ACTGGGCTTACTGAAACTCCTAG 59.484 47.826 0.00 0.00 0.00 3.02
1603 3019 3.007614 TCCACTACTGGGCTTACTGAAAC 59.992 47.826 0.00 0.00 38.25 2.78
1642 3058 3.497332 TGGAACGGAGGGAGTATATCAG 58.503 50.000 0.00 0.00 0.00 2.90
1650 3066 3.532542 GAGTAATTTGGAACGGAGGGAG 58.467 50.000 0.00 0.00 0.00 4.30
1651 3067 2.093869 CGAGTAATTTGGAACGGAGGGA 60.094 50.000 0.00 0.00 0.00 4.20
1652 3068 2.277084 CGAGTAATTTGGAACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
1653 3069 2.928116 GACGAGTAATTTGGAACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
1654 3070 2.597305 CGACGAGTAATTTGGAACGGAG 59.403 50.000 0.00 0.00 0.00 4.63
1655 3071 2.598589 CGACGAGTAATTTGGAACGGA 58.401 47.619 0.00 0.00 0.00 4.69
1656 3072 1.060122 GCGACGAGTAATTTGGAACGG 59.940 52.381 0.00 0.00 0.00 4.44
1657 3073 1.990563 AGCGACGAGTAATTTGGAACG 59.009 47.619 0.00 0.00 0.00 3.95
1658 3074 2.991190 TCAGCGACGAGTAATTTGGAAC 59.009 45.455 0.00 0.00 0.00 3.62
1659 3075 3.306917 TCAGCGACGAGTAATTTGGAA 57.693 42.857 0.00 0.00 0.00 3.53
1660 3076 3.306917 TTCAGCGACGAGTAATTTGGA 57.693 42.857 0.00 0.00 0.00 3.53
1661 3077 4.334443 CATTTCAGCGACGAGTAATTTGG 58.666 43.478 0.00 0.00 0.00 3.28
1662 3078 4.092821 TCCATTTCAGCGACGAGTAATTTG 59.907 41.667 0.00 0.00 0.00 2.32
1663 3079 4.250464 TCCATTTCAGCGACGAGTAATTT 58.750 39.130 0.00 0.00 0.00 1.82
1664 3080 3.857052 TCCATTTCAGCGACGAGTAATT 58.143 40.909 0.00 0.00 0.00 1.40
1665 3081 3.520290 TCCATTTCAGCGACGAGTAAT 57.480 42.857 0.00 0.00 0.00 1.89
1666 3082 3.186909 CATCCATTTCAGCGACGAGTAA 58.813 45.455 0.00 0.00 0.00 2.24
1667 3083 2.165641 ACATCCATTTCAGCGACGAGTA 59.834 45.455 0.00 0.00 0.00 2.59
1668 3084 1.066858 ACATCCATTTCAGCGACGAGT 60.067 47.619 0.00 0.00 0.00 4.18
1669 3085 1.645034 ACATCCATTTCAGCGACGAG 58.355 50.000 0.00 0.00 0.00 4.18
1670 3086 2.951457 TACATCCATTTCAGCGACGA 57.049 45.000 0.00 0.00 0.00 4.20
1671 3087 3.384668 AGATACATCCATTTCAGCGACG 58.615 45.455 0.00 0.00 0.00 5.12
1672 3088 5.773575 TCTAGATACATCCATTTCAGCGAC 58.226 41.667 0.00 0.00 0.00 5.19
1673 3089 6.040955 AGTTCTAGATACATCCATTTCAGCGA 59.959 38.462 0.00 0.00 0.00 4.93
1674 3090 6.219473 AGTTCTAGATACATCCATTTCAGCG 58.781 40.000 0.00 0.00 0.00 5.18
1675 3091 9.547753 TTTAGTTCTAGATACATCCATTTCAGC 57.452 33.333 0.00 0.00 0.00 4.26
1702 3118 9.043079 CGTACGTATGGATGTATCTAGATGTAT 57.957 37.037 15.79 9.11 34.84 2.29
1703 3119 8.253113 TCGTACGTATGGATGTATCTAGATGTA 58.747 37.037 15.79 4.44 32.29 2.29
1704 3120 7.064371 GTCGTACGTATGGATGTATCTAGATGT 59.936 40.741 15.79 3.16 34.03 3.06
1705 3121 7.064253 TGTCGTACGTATGGATGTATCTAGATG 59.936 40.741 15.79 0.00 29.78 2.90
1706 3122 7.101700 TGTCGTACGTATGGATGTATCTAGAT 58.898 38.462 16.05 10.73 29.78 1.98
1707 3123 6.458210 TGTCGTACGTATGGATGTATCTAGA 58.542 40.000 16.05 0.00 29.78 2.43
1708 3124 6.716898 TGTCGTACGTATGGATGTATCTAG 57.283 41.667 16.05 0.00 29.78 2.43
1709 3125 6.707608 ACTTGTCGTACGTATGGATGTATCTA 59.292 38.462 16.05 0.00 29.78 1.98
1710 3126 5.530171 ACTTGTCGTACGTATGGATGTATCT 59.470 40.000 16.05 0.00 29.78 1.98
1711 3127 5.755813 ACTTGTCGTACGTATGGATGTATC 58.244 41.667 16.05 0.00 29.78 2.24
1712 3128 5.762825 ACTTGTCGTACGTATGGATGTAT 57.237 39.130 16.05 0.00 29.78 2.29
1713 3129 6.676237 TTACTTGTCGTACGTATGGATGTA 57.324 37.500 16.05 10.72 0.00 2.29
1714 3130 5.565592 TTACTTGTCGTACGTATGGATGT 57.434 39.130 16.05 11.53 0.00 3.06
1715 3131 6.129535 CGAATTACTTGTCGTACGTATGGATG 60.130 42.308 16.05 6.93 32.61 3.51
1716 3132 5.911280 CGAATTACTTGTCGTACGTATGGAT 59.089 40.000 16.05 0.78 32.61 3.41
1717 3133 5.265477 CGAATTACTTGTCGTACGTATGGA 58.735 41.667 16.05 5.16 32.61 3.41
1718 3134 4.438797 CCGAATTACTTGTCGTACGTATGG 59.561 45.833 16.05 7.26 35.48 2.74
1719 3135 5.265477 TCCGAATTACTTGTCGTACGTATG 58.735 41.667 16.05 8.56 35.48 2.39
1720 3136 5.484173 TCCGAATTACTTGTCGTACGTAT 57.516 39.130 16.05 0.22 35.48 3.06
1721 3137 4.937696 TCCGAATTACTTGTCGTACGTA 57.062 40.909 16.05 2.87 35.48 3.57
1722 3138 3.829886 TCCGAATTACTTGTCGTACGT 57.170 42.857 16.05 0.00 35.48 3.57
1723 3139 3.002732 CGTTCCGAATTACTTGTCGTACG 60.003 47.826 9.53 9.53 37.20 3.67
1724 3140 3.301642 CCGTTCCGAATTACTTGTCGTAC 59.698 47.826 0.00 0.00 35.48 3.67
1725 3141 3.190327 TCCGTTCCGAATTACTTGTCGTA 59.810 43.478 0.00 0.00 35.48 3.43
1726 3142 2.030007 TCCGTTCCGAATTACTTGTCGT 60.030 45.455 0.00 0.00 35.48 4.34
1727 3143 2.597305 CTCCGTTCCGAATTACTTGTCG 59.403 50.000 0.00 0.00 37.01 4.35
1728 3144 2.928116 CCTCCGTTCCGAATTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
1729 3145 2.354403 CCCTCCGTTCCGAATTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
1730 3146 2.093869 TCCCTCCGTTCCGAATTACTTG 60.094 50.000 0.00 0.00 0.00 3.16
1731 3147 2.167900 CTCCCTCCGTTCCGAATTACTT 59.832 50.000 0.00 0.00 0.00 2.24
1732 3148 1.755380 CTCCCTCCGTTCCGAATTACT 59.245 52.381 0.00 0.00 0.00 2.24
1733 3149 1.479730 ACTCCCTCCGTTCCGAATTAC 59.520 52.381 0.00 0.00 0.00 1.89
1734 3150 1.856629 ACTCCCTCCGTTCCGAATTA 58.143 50.000 0.00 0.00 0.00 1.40
1735 3151 1.856629 TACTCCCTCCGTTCCGAATT 58.143 50.000 0.00 0.00 0.00 2.17
1736 3152 2.083628 ATACTCCCTCCGTTCCGAAT 57.916 50.000 0.00 0.00 0.00 3.34
1737 3153 2.734755 TATACTCCCTCCGTTCCGAA 57.265 50.000 0.00 0.00 0.00 4.30
1738 3154 2.889045 CAATATACTCCCTCCGTTCCGA 59.111 50.000 0.00 0.00 0.00 4.55
1739 3155 2.029290 CCAATATACTCCCTCCGTTCCG 60.029 54.545 0.00 0.00 0.00 4.30
1740 3156 2.970640 ACCAATATACTCCCTCCGTTCC 59.029 50.000 0.00 0.00 0.00 3.62
1741 3157 4.344390 AGAACCAATATACTCCCTCCGTTC 59.656 45.833 0.00 0.00 0.00 3.95
1742 3158 4.296056 AGAACCAATATACTCCCTCCGTT 58.704 43.478 0.00 0.00 0.00 4.44
1743 3159 3.896272 GAGAACCAATATACTCCCTCCGT 59.104 47.826 0.00 0.00 0.00 4.69
1744 3160 3.057456 CGAGAACCAATATACTCCCTCCG 60.057 52.174 0.00 0.00 0.00 4.63
1745 3161 3.258622 CCGAGAACCAATATACTCCCTCC 59.741 52.174 0.00 0.00 0.00 4.30
1746 3162 3.896272 ACCGAGAACCAATATACTCCCTC 59.104 47.826 0.00 0.00 0.00 4.30
1747 3163 3.641906 CACCGAGAACCAATATACTCCCT 59.358 47.826 0.00 0.00 0.00 4.20
1748 3164 3.387050 ACACCGAGAACCAATATACTCCC 59.613 47.826 0.00 0.00 0.00 4.30
1749 3165 4.667519 ACACCGAGAACCAATATACTCC 57.332 45.455 0.00 0.00 0.00 3.85
1750 3166 7.208080 ACATTACACCGAGAACCAATATACTC 58.792 38.462 0.00 0.00 0.00 2.59
1751 3167 7.120923 ACATTACACCGAGAACCAATATACT 57.879 36.000 0.00 0.00 0.00 2.12
1752 3168 7.781548 AACATTACACCGAGAACCAATATAC 57.218 36.000 0.00 0.00 0.00 1.47
1785 3210 7.909121 CAGAGCAATGCTAAGAAAATTACAGAG 59.091 37.037 8.12 0.00 39.88 3.35
1861 3286 4.273480 ACGATTAGTGTAAAGCATGCATCC 59.727 41.667 21.98 5.08 0.00 3.51
1870 3295 6.645415 AGTCACCTTCAACGATTAGTGTAAAG 59.355 38.462 0.00 0.00 0.00 1.85
1895 3320 3.398629 TCCCAATATGATGAGAATGGCCA 59.601 43.478 8.56 8.56 0.00 5.36
1918 3343 7.610305 TGTTTCATGTAGAACTATCTTTTCCCC 59.390 37.037 0.00 0.00 37.10 4.81
1922 3347 9.236006 AGCATGTTTCATGTAGAACTATCTTTT 57.764 29.630 10.68 0.00 37.10 2.27
2066 3491 0.317103 CTTGAGTCCGTCGCCTATCG 60.317 60.000 0.00 0.00 40.15 2.92
2243 3670 4.201980 ACAAACAAAGCCGGTCTTAAGTTC 60.202 41.667 19.49 0.00 34.27 3.01
2327 3764 6.463995 TTTCCACAAAGAACTACAAAGCAT 57.536 33.333 0.00 0.00 0.00 3.79
2329 3766 6.503524 TGATTTCCACAAAGAACTACAAAGC 58.496 36.000 0.00 0.00 0.00 3.51
2460 3904 6.040842 AGTGGCAACTACTGAATTCAAATGTT 59.959 34.615 9.88 10.85 33.79 2.71
2720 4174 6.731540 GTCATCTGACCTACCTATCTGGTGG 61.732 52.000 0.00 0.00 45.66 4.61
2750 4205 8.094548 AGCCAACTGCACGAAGAAATATATATA 58.905 33.333 0.00 0.00 44.83 0.86
2751 4206 6.936900 AGCCAACTGCACGAAGAAATATATAT 59.063 34.615 0.00 0.00 44.83 0.86
2752 4207 6.288294 AGCCAACTGCACGAAGAAATATATA 58.712 36.000 0.00 0.00 44.83 0.86
2833 4490 6.185114 AGCCAGATGATATATAATGGAGGC 57.815 41.667 8.19 8.19 37.52 4.70
2898 4570 0.614697 TGGCCACTGTAGCTGCTCTA 60.615 55.000 4.91 0.00 0.00 2.43
2899 4571 1.483595 TTGGCCACTGTAGCTGCTCT 61.484 55.000 3.88 0.00 0.00 4.09
2928 4600 6.068670 ACTGGGGGCAGATTATGTAATAAAC 58.931 40.000 0.00 0.00 42.96 2.01
2929 4601 6.274322 ACTGGGGGCAGATTATGTAATAAA 57.726 37.500 0.00 0.00 42.96 1.40
2930 4602 5.922960 ACTGGGGGCAGATTATGTAATAA 57.077 39.130 0.00 0.00 44.01 1.40
2931 4603 5.371176 TGAACTGGGGGCAGATTATGTAATA 59.629 40.000 0.00 0.00 0.00 0.98
2932 4604 4.167892 TGAACTGGGGGCAGATTATGTAAT 59.832 41.667 0.00 0.00 0.00 1.89
2933 4605 3.525609 TGAACTGGGGGCAGATTATGTAA 59.474 43.478 0.00 0.00 0.00 2.41
2934 4606 3.119319 TGAACTGGGGGCAGATTATGTA 58.881 45.455 0.00 0.00 0.00 2.29
2935 4607 1.922447 TGAACTGGGGGCAGATTATGT 59.078 47.619 0.00 0.00 0.00 2.29
2936 4608 2.579873 CTGAACTGGGGGCAGATTATG 58.420 52.381 0.00 0.00 0.00 1.90
2937 4609 1.133668 GCTGAACTGGGGGCAGATTAT 60.134 52.381 0.00 0.00 0.00 1.28
2938 4610 0.255890 GCTGAACTGGGGGCAGATTA 59.744 55.000 0.00 0.00 0.00 1.75
2939 4611 1.000396 GCTGAACTGGGGGCAGATT 60.000 57.895 0.00 0.00 0.00 2.40
2940 4612 1.578215 ATGCTGAACTGGGGGCAGAT 61.578 55.000 0.00 0.00 38.11 2.90
2956 4628 2.931969 GCAAAGTTTAGGAATGGCATGC 59.068 45.455 9.90 9.90 0.00 4.06
2961 4633 2.671070 GCCGTGCAAAGTTTAGGAATGG 60.671 50.000 0.00 0.00 0.00 3.16
2997 4669 4.067896 CTGACTACACAATTGGCTGTCTT 58.932 43.478 10.83 0.00 0.00 3.01
3003 4675 5.438761 AAAAGACTGACTACACAATTGGC 57.561 39.130 10.83 0.00 0.00 4.52
3005 4677 8.075574 TGCATAAAAAGACTGACTACACAATTG 58.924 33.333 3.24 3.24 0.00 2.32
3007 4679 7.744087 TGCATAAAAAGACTGACTACACAAT 57.256 32.000 0.00 0.00 0.00 2.71
3009 4681 7.414436 GTTTGCATAAAAAGACTGACTACACA 58.586 34.615 0.00 0.00 0.00 3.72
3057 4730 2.834549 AGAATCTCACAGGGACATCGTT 59.165 45.455 0.00 0.00 0.00 3.85
3058 4731 2.461695 AGAATCTCACAGGGACATCGT 58.538 47.619 0.00 0.00 0.00 3.73
3186 4859 2.136298 TTCAGTTTGCCAGGTTGTCA 57.864 45.000 0.00 0.00 0.00 3.58
3198 4871 4.144297 TGGCTGCTAAGATGTTTCAGTTT 58.856 39.130 0.00 0.00 0.00 2.66
3221 4894 6.458210 CCATGTTACATGCTTTCTTTTCCTT 58.542 36.000 18.95 0.00 0.00 3.36
3243 4916 3.244946 TGAATAAATGACCACCGTTCCCA 60.245 43.478 0.00 0.00 0.00 4.37
3350 5023 8.051901 AGTGTAGAAAATGTATGCCCTTAAAC 57.948 34.615 0.00 0.00 0.00 2.01
3380 5053 5.661312 AGCTAGATGAAGTGTATGTAACCCA 59.339 40.000 0.00 0.00 0.00 4.51
3471 5147 6.624352 ATGATACAATAATTTGCGCTGACT 57.376 33.333 9.73 0.00 36.22 3.41
3473 5149 8.401709 TGTAAATGATACAATAATTTGCGCTGA 58.598 29.630 9.73 0.00 36.22 4.26
3537 5217 2.887152 CAACCTTTCCTGGAACAAGGAG 59.113 50.000 26.59 17.05 38.70 3.69
3763 5452 6.943146 ACTCTGGATAGATTCAGCTAACGATA 59.057 38.462 0.00 0.00 31.21 2.92
3870 5588 5.646362 CAAAAACAACGTTTGCAACATTG 57.354 34.783 0.00 6.80 40.17 2.82
3925 5645 7.977818 TGGCAAATTACAGAGACTATGGATAT 58.022 34.615 1.55 0.00 0.00 1.63
3926 5646 7.071196 ACTGGCAAATTACAGAGACTATGGATA 59.929 37.037 1.55 0.00 38.09 2.59
3929 5649 5.431765 ACTGGCAAATTACAGAGACTATGG 58.568 41.667 1.55 0.00 38.09 2.74
3934 5654 4.022849 AGCAAACTGGCAAATTACAGAGAC 60.023 41.667 10.57 0.42 38.09 3.36
4091 5831 5.918576 GCTACGGCTTCTTTTGTACAAAAAT 59.081 36.000 28.52 13.83 36.40 1.82
4127 6029 1.235724 GGGTTTCACCACGGAGAAAG 58.764 55.000 8.68 0.00 41.02 2.62
4133 6035 0.464735 TGAGTTGGGTTTCACCACGG 60.465 55.000 0.00 0.00 41.02 4.94
4163 6065 2.821366 CTCAGGCCGATGGTGTGC 60.821 66.667 0.00 0.00 0.00 4.57
4164 6066 2.124983 CCTCAGGCCGATGGTGTG 60.125 66.667 0.00 0.00 0.00 3.82
4165 6067 2.607750 ACCTCAGGCCGATGGTGT 60.608 61.111 14.27 0.00 0.00 4.16
4166 6068 2.187946 GACCTCAGGCCGATGGTG 59.812 66.667 18.74 1.96 32.30 4.17
4167 6069 3.083997 GGACCTCAGGCCGATGGT 61.084 66.667 14.80 14.80 35.23 3.55
4168 6070 2.669133 TTGGACCTCAGGCCGATGG 61.669 63.158 0.00 2.90 0.00 3.51
4169 6071 1.450312 GTTGGACCTCAGGCCGATG 60.450 63.158 0.00 0.00 0.00 3.84
4170 6072 1.903877 CTGTTGGACCTCAGGCCGAT 61.904 60.000 0.00 0.00 0.00 4.18
4171 6073 2.525629 TGTTGGACCTCAGGCCGA 60.526 61.111 0.00 0.00 0.00 5.54
4172 6074 1.903877 ATCTGTTGGACCTCAGGCCG 61.904 60.000 14.17 0.00 33.13 6.13
4173 6075 0.393537 CATCTGTTGGACCTCAGGCC 60.394 60.000 14.17 0.00 33.13 5.19
4233 6140 2.955751 GATGTAGTGGCGGACGAGGC 62.956 65.000 0.00 0.00 37.19 4.70
4431 6347 2.588877 ACATGTAGGCATCGCGGC 60.589 61.111 6.13 1.57 41.61 6.53
4864 6781 0.965866 TGATCTCGTTCGGGAGCACT 60.966 55.000 8.94 0.00 33.98 4.40
4928 6845 2.610859 AACCATCTCCCCGGCAGT 60.611 61.111 0.00 0.00 0.00 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.