Multiple sequence alignment - TraesCS4D01G082000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G082000 chr4D 100.000 5126 0 0 1 5126 55485764 55490889 0.000000e+00 9467.0
1 TraesCS4D01G082000 chr4D 91.803 61 4 1 423 483 301247569 301247628 3.290000e-12 84.2
2 TraesCS4D01G082000 chr4D 83.721 86 12 2 27 111 442892285 442892369 4.250000e-11 80.5
3 TraesCS4D01G082000 chr4D 88.889 63 0 1 4890 4945 55490608 55490670 2.560000e-08 71.3
4 TraesCS4D01G082000 chr4D 88.889 63 0 1 4845 4907 55490653 55490708 2.560000e-08 71.3
5 TraesCS4D01G082000 chr4B 93.003 3630 180 39 637 4248 82503040 82506613 0.000000e+00 5228.0
6 TraesCS4D01G082000 chr4B 86.555 238 27 4 185 422 82431393 82431625 1.830000e-64 257.0
7 TraesCS4D01G082000 chr4B 92.199 141 11 0 483 623 82502915 82503055 3.130000e-47 200.0
8 TraesCS4D01G082000 chr4B 95.294 85 4 0 4707 4791 634415142 634415226 8.950000e-28 135.0
9 TraesCS4D01G082000 chr4A 91.752 2049 113 20 653 2670 541430620 541428597 0.000000e+00 2796.0
10 TraesCS4D01G082000 chr4A 92.681 1175 59 8 3458 4632 541427714 541426567 0.000000e+00 1668.0
11 TraesCS4D01G082000 chr4A 92.892 619 30 6 2847 3462 541428442 541427835 0.000000e+00 887.0
12 TraesCS4D01G082000 chr4A 96.579 497 10 1 4630 5126 541426444 541425955 0.000000e+00 817.0
13 TraesCS4D01G082000 chr4A 89.362 141 15 0 483 623 541430844 541430704 1.470000e-40 178.0
14 TraesCS4D01G082000 chr4A 98.305 59 1 0 4890 4948 541426229 541426171 2.520000e-18 104.0
15 TraesCS4D01G082000 chr4A 88.000 75 9 0 4791 4865 541425956 541425882 7.070000e-14 89.8
16 TraesCS4D01G082000 chr4A 86.364 66 2 1 4845 4910 541426191 541426133 1.190000e-06 65.8
17 TraesCS4D01G082000 chr7A 94.524 420 16 1 4707 5126 100252140 100252552 4.330000e-180 641.0
18 TraesCS4D01G082000 chr7A 96.721 61 2 0 424 484 603134978 603135038 9.080000e-18 102.0
19 TraesCS4D01G082000 chr7A 96.429 56 2 0 4890 4945 100252278 100252333 5.460000e-15 93.5
20 TraesCS4D01G082000 chr7A 88.000 75 9 0 4791 4865 100252551 100252625 7.070000e-14 89.8
21 TraesCS4D01G082000 chr7A 92.157 51 4 0 2712 2762 85209399 85209349 7.120000e-09 73.1
22 TraesCS4D01G082000 chr7A 88.889 63 0 1 4845 4907 100252316 100252371 2.560000e-08 71.3
23 TraesCS4D01G082000 chr1A 97.046 237 6 1 4890 5126 117808609 117808844 1.030000e-106 398.0
24 TraesCS4D01G082000 chr1A 94.819 193 3 5 4715 4907 117808479 117808664 1.400000e-75 294.0
25 TraesCS4D01G082000 chr1A 96.552 87 3 0 4707 4793 117808413 117808499 1.490000e-30 145.0
26 TraesCS4D01G082000 chr1A 90.566 53 5 0 2710 2762 437585318 437585266 2.560000e-08 71.3
27 TraesCS4D01G082000 chr7B 87.204 211 20 5 2845 3054 16920568 16920364 3.090000e-57 233.0
28 TraesCS4D01G082000 chr6A 93.798 129 8 0 4998 5126 319172353 319172481 1.460000e-45 195.0
29 TraesCS4D01G082000 chr6A 92.929 99 4 2 4707 4804 435783720 435783624 1.920000e-29 141.0
30 TraesCS4D01G082000 chr6A 87.705 122 4 5 5007 5126 435783008 435782896 1.160000e-26 132.0
31 TraesCS4D01G082000 chr6A 78.030 132 22 6 38 166 448360486 448360613 5.500000e-10 76.8
32 TraesCS4D01G082000 chr2A 92.248 129 10 0 4998 5126 708668957 708668829 3.150000e-42 183.0
33 TraesCS4D01G082000 chr2A 90.476 105 7 2 4707 4810 190209926 190209824 8.950000e-28 135.0
34 TraesCS4D01G082000 chr2A 86.777 121 5 4 5008 5126 190209214 190209103 1.940000e-24 124.0
35 TraesCS4D01G082000 chr2A 94.805 77 4 0 4715 4791 93189438 93189514 2.510000e-23 121.0
36 TraesCS4D01G082000 chr2A 93.750 80 5 0 4715 4794 708669187 708669108 2.510000e-23 121.0
37 TraesCS4D01G082000 chr2A 92.537 67 5 0 4792 4858 190209580 190209514 4.220000e-16 97.1
38 TraesCS4D01G082000 chr6B 86.131 137 16 1 2918 3054 275742463 275742330 1.490000e-30 145.0
39 TraesCS4D01G082000 chr6B 92.754 69 4 1 417 485 641310831 641310898 1.170000e-16 99.0
40 TraesCS4D01G082000 chr2B 79.191 173 29 6 2 169 37917425 37917255 4.190000e-21 113.0
41 TraesCS4D01G082000 chr2B 81.818 132 20 4 38 167 669937915 669937786 1.950000e-19 108.0
42 TraesCS4D01G082000 chr2B 86.667 75 8 2 34 107 425806285 425806358 1.180000e-11 82.4
43 TraesCS4D01G082000 chr2B 91.667 48 4 0 2709 2756 796805882 796805929 3.310000e-07 67.6
44 TraesCS4D01G082000 chr2B 83.051 59 10 0 110 168 680023981 680024039 3.000000e-03 54.7
45 TraesCS4D01G082000 chr3D 90.541 74 7 0 3471 3544 502127273 502127200 1.170000e-16 99.0
46 TraesCS4D01G082000 chr3A 90.541 74 7 0 3471 3544 641559744 641559671 1.170000e-16 99.0
47 TraesCS4D01G082000 chr5A 93.846 65 3 1 422 485 451706510 451706446 4.220000e-16 97.1
48 TraesCS4D01G082000 chr5A 95.349 43 2 0 2712 2754 662339271 662339313 9.210000e-08 69.4
49 TraesCS4D01G082000 chr2D 90.769 65 5 1 421 484 626925429 626925493 9.140000e-13 86.1
50 TraesCS4D01G082000 chr2D 88.889 54 6 0 2711 2764 380421493 380421546 3.310000e-07 67.6
51 TraesCS4D01G082000 chr5D 82.418 91 16 0 76 166 427513966 427514056 4.250000e-11 80.5
52 TraesCS4D01G082000 chr1D 90.566 53 5 0 2710 2762 338522675 338522623 2.560000e-08 71.3
53 TraesCS4D01G082000 chr6D 95.238 42 2 0 2713 2754 96709943 96709984 3.310000e-07 67.6
54 TraesCS4D01G082000 chr3B 90.000 50 5 0 2709 2758 532184956 532185005 1.190000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G082000 chr4D 55485764 55490889 5125 False 3203.2 9467 92.592667 1 5126 3 chr4D.!!$F3 5125
1 TraesCS4D01G082000 chr4B 82502915 82506613 3698 False 2714.0 5228 92.601000 483 4248 2 chr4B.!!$F3 3765
2 TraesCS4D01G082000 chr4A 541425882 541430844 4962 True 825.7 2796 91.991875 483 5126 8 chr4A.!!$R1 4643

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
155 156 0.031994 CGGTTTGAGGGTTGGCTTTG 59.968 55.000 0.00 0.00 0.00 2.77 F
166 167 0.114954 TTGGCTTTGGAGATGCCCTT 59.885 50.000 0.00 0.00 45.59 3.95 F
286 287 0.373716 GTAAGCGTGCATGTGTAGGC 59.626 55.000 7.93 7.54 40.85 3.93 F
293 294 0.389817 TGCATGTGTAGGCTGTCGTC 60.390 55.000 0.00 0.00 34.05 4.20 F
295 296 0.460284 CATGTGTAGGCTGTCGTCCC 60.460 60.000 0.00 0.00 0.00 4.46 F
330 331 0.687354 GAGAACACCCCTCTTCAGCA 59.313 55.000 0.00 0.00 0.00 4.41 F
479 480 0.726827 TATTTCAAAGCAGGCGCGAG 59.273 50.000 12.10 0.00 45.49 5.03 F
982 1046 1.004918 CGAAGAAACGAGGGCCACT 60.005 57.895 6.18 0.00 35.09 4.00 F
2355 2440 0.035458 GTAGCACTGGTTGGTCTGCT 59.965 55.000 0.00 0.00 37.13 4.24 F
3765 4040 1.801913 CGACCTGTCGCCTTTCTCG 60.802 63.158 6.77 0.00 46.50 4.04 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1590 1663 1.448717 GACGAAAGAGGGCAGAGGC 60.449 63.158 0.00 0.0 40.13 4.70 R
2153 2230 1.617850 TGGCCCTACATTTTGCACAAG 59.382 47.619 0.00 0.0 0.00 3.16 R
2212 2292 6.612456 TGCAATCCCTCCATTTCTAAATTGAT 59.388 34.615 0.00 0.0 0.00 2.57 R
2215 2295 7.441903 AATGCAATCCCTCCATTTCTAAATT 57.558 32.000 0.00 0.0 0.00 1.82 R
2259 2340 7.924412 TGGAGTATTTCATAAGTTATCACGGAC 59.076 37.037 0.00 0.0 0.00 4.79 R
2326 2411 1.089920 CCAGTGCTACCTTGTCATGC 58.910 55.000 0.00 0.0 0.00 4.06 R
2355 2440 0.676736 TACATGCGTCACCACTCACA 59.323 50.000 0.00 0.0 0.00 3.58 R
2949 3095 0.108281 GTGGTTTCTCCTCTACCGGC 60.108 60.000 0.00 0.0 34.62 6.13 R
3969 4244 0.034059 CGTTGACCCTCTTGAGCTGT 59.966 55.000 0.00 0.0 0.00 4.40 R
4869 5270 1.980765 TCCATGGCAAGAGTCAAGAGT 59.019 47.619 6.96 0.0 30.06 3.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 2.353573 CCCCCGTTTGATTCCGGT 59.646 61.111 0.00 0.00 42.67 5.28
38 39 1.303806 CCCCCGTTTGATTCCGGTT 60.304 57.895 0.00 0.00 42.67 4.44
39 40 0.896479 CCCCCGTTTGATTCCGGTTT 60.896 55.000 0.00 0.00 42.67 3.27
40 41 0.242555 CCCCGTTTGATTCCGGTTTG 59.757 55.000 0.00 0.00 42.67 2.93
41 42 0.955905 CCCGTTTGATTCCGGTTTGT 59.044 50.000 0.00 0.00 42.67 2.83
42 43 1.335506 CCCGTTTGATTCCGGTTTGTG 60.336 52.381 0.00 0.00 42.67 3.33
43 44 1.335506 CCGTTTGATTCCGGTTTGTGG 60.336 52.381 0.00 0.00 39.38 4.17
44 45 1.335506 CGTTTGATTCCGGTTTGTGGG 60.336 52.381 0.00 0.00 0.00 4.61
45 46 1.957877 GTTTGATTCCGGTTTGTGGGA 59.042 47.619 0.00 0.00 0.00 4.37
46 47 2.362717 GTTTGATTCCGGTTTGTGGGAA 59.637 45.455 0.00 0.00 45.72 3.97
47 48 2.366640 TGATTCCGGTTTGTGGGAAA 57.633 45.000 0.00 0.00 44.88 3.13
48 49 2.667470 TGATTCCGGTTTGTGGGAAAA 58.333 42.857 0.00 0.00 44.88 2.29
49 50 3.235200 TGATTCCGGTTTGTGGGAAAAT 58.765 40.909 0.00 0.00 44.88 1.82
50 51 3.257127 TGATTCCGGTTTGTGGGAAAATC 59.743 43.478 0.00 0.00 44.88 2.17
51 52 2.366640 TCCGGTTTGTGGGAAAATCA 57.633 45.000 0.00 0.00 0.00 2.57
52 53 2.883026 TCCGGTTTGTGGGAAAATCAT 58.117 42.857 0.00 0.00 0.00 2.45
53 54 2.560542 TCCGGTTTGTGGGAAAATCATG 59.439 45.455 0.00 0.00 0.00 3.07
54 55 2.353605 CCGGTTTGTGGGAAAATCATGG 60.354 50.000 0.00 0.00 0.00 3.66
55 56 2.298729 CGGTTTGTGGGAAAATCATGGT 59.701 45.455 0.00 0.00 0.00 3.55
56 57 3.613910 CGGTTTGTGGGAAAATCATGGTC 60.614 47.826 0.00 0.00 0.00 4.02
57 58 3.306710 GGTTTGTGGGAAAATCATGGTCC 60.307 47.826 0.00 0.00 0.00 4.46
58 59 1.832883 TGTGGGAAAATCATGGTCCG 58.167 50.000 0.00 0.00 31.73 4.79
59 60 1.102978 GTGGGAAAATCATGGTCCGG 58.897 55.000 0.00 0.00 31.73 5.14
60 61 0.995803 TGGGAAAATCATGGTCCGGA 59.004 50.000 0.00 0.00 31.73 5.14
61 62 1.340600 TGGGAAAATCATGGTCCGGAC 60.341 52.381 27.04 27.04 31.73 4.79
62 63 1.340600 GGGAAAATCATGGTCCGGACA 60.341 52.381 34.40 21.15 31.73 4.02
63 64 2.017049 GGAAAATCATGGTCCGGACAG 58.983 52.381 34.40 23.02 0.00 3.51
64 65 1.401905 GAAAATCATGGTCCGGACAGC 59.598 52.381 34.40 19.44 0.00 4.40
65 66 0.744414 AAATCATGGTCCGGACAGCG 60.744 55.000 34.40 21.28 0.00 5.18
66 67 1.899437 AATCATGGTCCGGACAGCGT 61.899 55.000 34.40 17.51 0.00 5.07
67 68 2.298158 ATCATGGTCCGGACAGCGTC 62.298 60.000 34.40 17.96 0.00 5.19
68 69 4.129737 ATGGTCCGGACAGCGTCG 62.130 66.667 34.40 0.00 32.65 5.12
76 77 4.400109 GACAGCGTCGCGGACAGA 62.400 66.667 24.11 0.00 32.09 3.41
77 78 3.685214 GACAGCGTCGCGGACAGAT 62.685 63.158 24.11 0.25 32.09 2.90
78 79 2.319011 GACAGCGTCGCGGACAGATA 62.319 60.000 24.11 0.00 32.09 1.98
79 80 1.939785 CAGCGTCGCGGACAGATAC 60.940 63.158 12.26 0.00 32.09 2.24
80 81 2.101575 GCGTCGCGGACAGATACA 59.898 61.111 6.13 0.00 32.09 2.29
81 82 1.939785 GCGTCGCGGACAGATACAG 60.940 63.158 6.13 0.00 32.09 2.74
82 83 1.298413 CGTCGCGGACAGATACAGG 60.298 63.158 6.13 0.00 32.09 4.00
83 84 1.712018 CGTCGCGGACAGATACAGGA 61.712 60.000 6.13 0.00 32.09 3.86
84 85 0.248539 GTCGCGGACAGATACAGGAC 60.249 60.000 6.13 0.00 32.09 3.85
85 86 1.065928 CGCGGACAGATACAGGACC 59.934 63.158 0.00 0.00 0.00 4.46
86 87 1.065928 GCGGACAGATACAGGACCG 59.934 63.158 0.00 0.00 42.63 4.79
87 88 1.065928 CGGACAGATACAGGACCGC 59.934 63.158 0.00 0.00 34.36 5.68
88 89 1.065928 GGACAGATACAGGACCGCG 59.934 63.158 0.00 0.00 0.00 6.46
89 90 1.664321 GGACAGATACAGGACCGCGT 61.664 60.000 4.92 0.00 0.00 6.01
90 91 0.172803 GACAGATACAGGACCGCGTT 59.827 55.000 4.92 0.00 0.00 4.84
91 92 0.108804 ACAGATACAGGACCGCGTTG 60.109 55.000 4.92 0.09 0.00 4.10
92 93 0.806102 CAGATACAGGACCGCGTTGG 60.806 60.000 4.92 0.00 46.41 3.77
93 94 0.968901 AGATACAGGACCGCGTTGGA 60.969 55.000 4.92 0.00 42.00 3.53
94 95 0.104304 GATACAGGACCGCGTTGGAT 59.896 55.000 4.92 0.00 42.00 3.41
95 96 0.179084 ATACAGGACCGCGTTGGATG 60.179 55.000 4.92 0.00 42.00 3.51
96 97 2.233605 TACAGGACCGCGTTGGATGG 62.234 60.000 4.92 0.00 42.00 3.51
97 98 4.778143 AGGACCGCGTTGGATGGC 62.778 66.667 4.92 0.00 42.00 4.40
98 99 4.778143 GGACCGCGTTGGATGGCT 62.778 66.667 4.92 0.00 42.00 4.75
99 100 2.746277 GACCGCGTTGGATGGCTT 60.746 61.111 4.92 0.00 42.00 4.35
100 101 2.282180 ACCGCGTTGGATGGCTTT 60.282 55.556 4.92 0.00 42.00 3.51
101 102 2.253414 GACCGCGTTGGATGGCTTTC 62.253 60.000 4.92 0.00 42.00 2.62
102 103 2.098298 CGCGTTGGATGGCTTTCG 59.902 61.111 0.00 0.00 0.00 3.46
103 104 2.677003 CGCGTTGGATGGCTTTCGT 61.677 57.895 0.00 0.00 0.00 3.85
104 105 1.154225 GCGTTGGATGGCTTTCGTG 60.154 57.895 0.00 0.00 0.00 4.35
105 106 1.501741 CGTTGGATGGCTTTCGTGG 59.498 57.895 0.00 0.00 0.00 4.94
106 107 1.234615 CGTTGGATGGCTTTCGTGGT 61.235 55.000 0.00 0.00 0.00 4.16
107 108 0.958822 GTTGGATGGCTTTCGTGGTT 59.041 50.000 0.00 0.00 0.00 3.67
108 109 1.068541 GTTGGATGGCTTTCGTGGTTC 60.069 52.381 0.00 0.00 0.00 3.62
109 110 0.953471 TGGATGGCTTTCGTGGTTCG 60.953 55.000 0.00 0.00 41.41 3.95
110 111 1.644786 GGATGGCTTTCGTGGTTCGG 61.645 60.000 0.00 0.00 40.32 4.30
111 112 0.672401 GATGGCTTTCGTGGTTCGGA 60.672 55.000 0.00 0.00 40.32 4.55
112 113 0.953960 ATGGCTTTCGTGGTTCGGAC 60.954 55.000 0.00 0.00 40.32 4.79
113 114 1.595929 GGCTTTCGTGGTTCGGACA 60.596 57.895 0.00 0.00 40.32 4.02
114 115 1.566018 GGCTTTCGTGGTTCGGACAG 61.566 60.000 0.00 0.00 40.32 3.51
115 116 1.860078 CTTTCGTGGTTCGGACAGC 59.140 57.895 0.00 0.00 40.32 4.40
116 117 0.600255 CTTTCGTGGTTCGGACAGCT 60.600 55.000 0.00 0.00 40.32 4.24
117 118 0.878523 TTTCGTGGTTCGGACAGCTG 60.879 55.000 13.48 13.48 40.32 4.24
118 119 1.740332 TTCGTGGTTCGGACAGCTGA 61.740 55.000 23.35 0.00 40.32 4.26
119 120 1.734477 CGTGGTTCGGACAGCTGAG 60.734 63.158 23.35 11.39 35.71 3.35
120 121 1.367840 GTGGTTCGGACAGCTGAGT 59.632 57.895 23.35 0.00 0.00 3.41
121 122 0.667792 GTGGTTCGGACAGCTGAGTC 60.668 60.000 23.35 8.41 37.80 3.36
127 128 4.823276 GACAGCTGAGTCCGGATG 57.177 61.111 23.35 2.52 40.71 3.51
128 129 1.142748 GACAGCTGAGTCCGGATGG 59.857 63.158 23.35 0.00 39.29 3.51
129 130 1.608717 GACAGCTGAGTCCGGATGGT 61.609 60.000 23.35 1.17 39.29 3.55
130 131 1.194781 ACAGCTGAGTCCGGATGGTT 61.195 55.000 23.35 0.00 39.29 3.67
131 132 0.742281 CAGCTGAGTCCGGATGGTTG 60.742 60.000 8.42 2.95 36.30 3.77
132 133 2.109126 GCTGAGTCCGGATGGTTGC 61.109 63.158 7.81 5.51 36.30 4.17
133 134 1.296392 CTGAGTCCGGATGGTTGCA 59.704 57.895 7.81 0.00 36.30 4.08
134 135 0.742281 CTGAGTCCGGATGGTTGCAG 60.742 60.000 7.81 5.64 36.30 4.41
135 136 1.191489 TGAGTCCGGATGGTTGCAGA 61.191 55.000 7.81 0.00 36.30 4.26
136 137 0.741221 GAGTCCGGATGGTTGCAGAC 60.741 60.000 7.81 0.00 36.30 3.51
137 138 2.100631 GTCCGGATGGTTGCAGACG 61.101 63.158 7.81 0.00 36.30 4.18
138 139 2.819595 CCGGATGGTTGCAGACGG 60.820 66.667 0.00 0.00 35.01 4.79
139 140 2.047274 CGGATGGTTGCAGACGGT 60.047 61.111 0.00 0.00 0.00 4.83
140 141 1.671054 CGGATGGTTGCAGACGGTT 60.671 57.895 0.00 0.00 0.00 4.44
141 142 1.234615 CGGATGGTTGCAGACGGTTT 61.235 55.000 0.00 0.00 0.00 3.27
142 143 0.240945 GGATGGTTGCAGACGGTTTG 59.759 55.000 0.00 0.00 0.00 2.93
143 144 1.234821 GATGGTTGCAGACGGTTTGA 58.765 50.000 2.42 0.00 0.00 2.69
144 145 1.197721 GATGGTTGCAGACGGTTTGAG 59.802 52.381 2.42 0.00 0.00 3.02
145 146 0.817634 TGGTTGCAGACGGTTTGAGG 60.818 55.000 2.42 0.00 0.00 3.86
146 147 1.515521 GGTTGCAGACGGTTTGAGGG 61.516 60.000 2.42 0.00 0.00 4.30
147 148 0.818040 GTTGCAGACGGTTTGAGGGT 60.818 55.000 2.42 0.00 0.00 4.34
148 149 0.106918 TTGCAGACGGTTTGAGGGTT 60.107 50.000 2.42 0.00 0.00 4.11
149 150 0.817634 TGCAGACGGTTTGAGGGTTG 60.818 55.000 2.42 0.00 0.00 3.77
150 151 1.515521 GCAGACGGTTTGAGGGTTGG 61.516 60.000 2.42 0.00 0.00 3.77
151 152 1.228154 AGACGGTTTGAGGGTTGGC 60.228 57.895 0.00 0.00 0.00 4.52
152 153 1.228154 GACGGTTTGAGGGTTGGCT 60.228 57.895 0.00 0.00 0.00 4.75
153 154 0.822121 GACGGTTTGAGGGTTGGCTT 60.822 55.000 0.00 0.00 0.00 4.35
154 155 0.396556 ACGGTTTGAGGGTTGGCTTT 60.397 50.000 0.00 0.00 0.00 3.51
155 156 0.031994 CGGTTTGAGGGTTGGCTTTG 59.968 55.000 0.00 0.00 0.00 2.77
156 157 0.392706 GGTTTGAGGGTTGGCTTTGG 59.607 55.000 0.00 0.00 0.00 3.28
157 158 1.408969 GTTTGAGGGTTGGCTTTGGA 58.591 50.000 0.00 0.00 0.00 3.53
158 159 1.341209 GTTTGAGGGTTGGCTTTGGAG 59.659 52.381 0.00 0.00 0.00 3.86
159 160 0.850100 TTGAGGGTTGGCTTTGGAGA 59.150 50.000 0.00 0.00 0.00 3.71
160 161 1.075601 TGAGGGTTGGCTTTGGAGAT 58.924 50.000 0.00 0.00 0.00 2.75
161 162 1.272092 TGAGGGTTGGCTTTGGAGATG 60.272 52.381 0.00 0.00 0.00 2.90
162 163 0.613012 AGGGTTGGCTTTGGAGATGC 60.613 55.000 0.00 0.00 0.00 3.91
163 164 1.607801 GGGTTGGCTTTGGAGATGCC 61.608 60.000 0.00 0.00 46.18 4.40
164 165 1.607801 GGTTGGCTTTGGAGATGCCC 61.608 60.000 0.00 0.00 45.59 5.36
165 166 0.613012 GTTGGCTTTGGAGATGCCCT 60.613 55.000 0.00 0.00 45.59 5.19
166 167 0.114954 TTGGCTTTGGAGATGCCCTT 59.885 50.000 0.00 0.00 45.59 3.95
167 168 0.998928 TGGCTTTGGAGATGCCCTTA 59.001 50.000 0.00 0.00 45.59 2.69
168 169 1.064463 TGGCTTTGGAGATGCCCTTAG 60.064 52.381 0.00 0.00 45.59 2.18
169 170 1.064389 GGCTTTGGAGATGCCCTTAGT 60.064 52.381 0.00 0.00 41.53 2.24
170 171 2.019984 GCTTTGGAGATGCCCTTAGTG 58.980 52.381 0.00 0.00 34.97 2.74
171 172 2.356125 GCTTTGGAGATGCCCTTAGTGA 60.356 50.000 0.00 0.00 34.97 3.41
172 173 3.539604 CTTTGGAGATGCCCTTAGTGAG 58.460 50.000 0.00 0.00 34.97 3.51
173 174 2.550277 TGGAGATGCCCTTAGTGAGA 57.450 50.000 0.00 0.00 34.97 3.27
174 175 2.392662 TGGAGATGCCCTTAGTGAGAG 58.607 52.381 0.00 0.00 34.97 3.20
175 176 2.023984 TGGAGATGCCCTTAGTGAGAGA 60.024 50.000 0.00 0.00 34.97 3.10
176 177 2.627699 GGAGATGCCCTTAGTGAGAGAG 59.372 54.545 0.00 0.00 0.00 3.20
177 178 3.561143 GAGATGCCCTTAGTGAGAGAGA 58.439 50.000 0.00 0.00 0.00 3.10
178 179 4.151883 GAGATGCCCTTAGTGAGAGAGAT 58.848 47.826 0.00 0.00 0.00 2.75
179 180 4.555689 AGATGCCCTTAGTGAGAGAGATT 58.444 43.478 0.00 0.00 0.00 2.40
180 181 4.968080 AGATGCCCTTAGTGAGAGAGATTT 59.032 41.667 0.00 0.00 0.00 2.17
181 182 5.428131 AGATGCCCTTAGTGAGAGAGATTTT 59.572 40.000 0.00 0.00 0.00 1.82
182 183 6.613271 AGATGCCCTTAGTGAGAGAGATTTTA 59.387 38.462 0.00 0.00 0.00 1.52
183 184 6.227298 TGCCCTTAGTGAGAGAGATTTTAG 57.773 41.667 0.00 0.00 0.00 1.85
184 185 5.129485 TGCCCTTAGTGAGAGAGATTTTAGG 59.871 44.000 0.00 0.00 0.00 2.69
185 186 5.364157 GCCCTTAGTGAGAGAGATTTTAGGA 59.636 44.000 0.00 0.00 0.00 2.94
186 187 6.684362 GCCCTTAGTGAGAGAGATTTTAGGAC 60.684 46.154 0.00 0.00 0.00 3.85
187 188 6.381420 CCCTTAGTGAGAGAGATTTTAGGACA 59.619 42.308 0.00 0.00 0.00 4.02
188 189 7.070571 CCCTTAGTGAGAGAGATTTTAGGACAT 59.929 40.741 0.00 0.00 0.00 3.06
189 190 8.141268 CCTTAGTGAGAGAGATTTTAGGACATC 58.859 40.741 0.00 0.00 0.00 3.06
190 191 8.595362 TTAGTGAGAGAGATTTTAGGACATCA 57.405 34.615 0.00 0.00 0.00 3.07
191 192 7.673641 AGTGAGAGAGATTTTAGGACATCAT 57.326 36.000 0.00 0.00 0.00 2.45
192 193 7.725251 AGTGAGAGAGATTTTAGGACATCATC 58.275 38.462 0.00 0.00 0.00 2.92
193 194 6.640499 GTGAGAGAGATTTTAGGACATCATCG 59.360 42.308 0.00 0.00 0.00 3.84
194 195 5.537188 AGAGAGATTTTAGGACATCATCGC 58.463 41.667 0.00 0.00 0.00 4.58
195 196 4.302455 AGAGATTTTAGGACATCATCGCG 58.698 43.478 0.00 0.00 0.00 5.87
196 197 4.051922 GAGATTTTAGGACATCATCGCGT 58.948 43.478 5.77 0.00 0.00 6.01
197 198 4.442706 AGATTTTAGGACATCATCGCGTT 58.557 39.130 5.77 0.00 0.00 4.84
198 199 4.876107 AGATTTTAGGACATCATCGCGTTT 59.124 37.500 5.77 0.00 0.00 3.60
199 200 4.335082 TTTTAGGACATCATCGCGTTTG 57.665 40.909 5.77 5.68 0.00 2.93
200 201 1.286501 TAGGACATCATCGCGTTTGC 58.713 50.000 5.77 0.00 37.91 3.68
201 202 0.391661 AGGACATCATCGCGTTTGCT 60.392 50.000 5.77 0.00 39.65 3.91
202 203 1.134818 AGGACATCATCGCGTTTGCTA 60.135 47.619 5.77 0.00 39.65 3.49
203 204 1.867233 GGACATCATCGCGTTTGCTAT 59.133 47.619 5.77 0.00 39.65 2.97
204 205 2.348872 GGACATCATCGCGTTTGCTATG 60.349 50.000 5.77 8.64 43.60 2.23
205 206 2.279741 ACATCATCGCGTTTGCTATGT 58.720 42.857 5.77 9.24 42.97 2.29
206 207 2.677836 ACATCATCGCGTTTGCTATGTT 59.322 40.909 5.77 0.00 42.97 2.71
207 208 3.126858 ACATCATCGCGTTTGCTATGTTT 59.873 39.130 5.77 0.00 42.97 2.83
208 209 3.116063 TCATCGCGTTTGCTATGTTTG 57.884 42.857 5.77 0.00 42.97 2.93
209 210 1.578915 CATCGCGTTTGCTATGTTTGC 59.421 47.619 5.77 0.00 38.94 3.68
210 211 0.588737 TCGCGTTTGCTATGTTTGCA 59.411 45.000 5.77 0.00 39.65 4.08
211 212 1.002359 TCGCGTTTGCTATGTTTGCAA 60.002 42.857 5.77 0.00 46.90 4.08
221 222 6.579666 TGCTATGTTTGCAATCTCTTTTCT 57.420 33.333 0.00 0.00 37.51 2.52
222 223 6.985117 TGCTATGTTTGCAATCTCTTTTCTT 58.015 32.000 0.00 0.00 37.51 2.52
223 224 8.109705 TGCTATGTTTGCAATCTCTTTTCTTA 57.890 30.769 0.00 0.00 37.51 2.10
224 225 8.023128 TGCTATGTTTGCAATCTCTTTTCTTAC 58.977 33.333 0.00 0.00 37.51 2.34
225 226 8.239998 GCTATGTTTGCAATCTCTTTTCTTACT 58.760 33.333 0.00 0.00 0.00 2.24
228 229 8.225603 TGTTTGCAATCTCTTTTCTTACTTCT 57.774 30.769 0.00 0.00 0.00 2.85
229 230 9.337396 TGTTTGCAATCTCTTTTCTTACTTCTA 57.663 29.630 0.00 0.00 0.00 2.10
230 231 9.600646 GTTTGCAATCTCTTTTCTTACTTCTAC 57.399 33.333 0.00 0.00 0.00 2.59
231 232 9.561069 TTTGCAATCTCTTTTCTTACTTCTACT 57.439 29.630 0.00 0.00 0.00 2.57
232 233 9.561069 TTGCAATCTCTTTTCTTACTTCTACTT 57.439 29.630 0.00 0.00 0.00 2.24
233 234 9.561069 TGCAATCTCTTTTCTTACTTCTACTTT 57.439 29.630 0.00 0.00 0.00 2.66
238 239 9.262358 TCTCTTTTCTTACTTCTACTTTCTTGC 57.738 33.333 0.00 0.00 0.00 4.01
239 240 8.958119 TCTTTTCTTACTTCTACTTTCTTGCA 57.042 30.769 0.00 0.00 0.00 4.08
240 241 9.391006 TCTTTTCTTACTTCTACTTTCTTGCAA 57.609 29.630 0.00 0.00 0.00 4.08
241 242 9.657121 CTTTTCTTACTTCTACTTTCTTGCAAG 57.343 33.333 20.81 20.81 0.00 4.01
242 243 8.732746 TTTCTTACTTCTACTTTCTTGCAAGT 57.267 30.769 25.19 10.16 40.28 3.16
243 244 8.732746 TTCTTACTTCTACTTTCTTGCAAGTT 57.267 30.769 25.19 11.26 38.07 2.66
244 245 8.732746 TCTTACTTCTACTTTCTTGCAAGTTT 57.267 30.769 25.19 10.93 38.07 2.66
245 246 8.827677 TCTTACTTCTACTTTCTTGCAAGTTTC 58.172 33.333 25.19 0.00 38.07 2.78
246 247 6.049263 ACTTCTACTTTCTTGCAAGTTTCG 57.951 37.500 25.19 14.44 38.07 3.46
247 248 5.007724 ACTTCTACTTTCTTGCAAGTTTCGG 59.992 40.000 25.19 14.13 38.07 4.30
248 249 4.448210 TCTACTTTCTTGCAAGTTTCGGT 58.552 39.130 25.19 18.26 38.07 4.69
249 250 4.879545 TCTACTTTCTTGCAAGTTTCGGTT 59.120 37.500 25.19 7.86 38.07 4.44
250 251 4.028852 ACTTTCTTGCAAGTTTCGGTTC 57.971 40.909 25.19 0.00 32.81 3.62
251 252 3.181490 ACTTTCTTGCAAGTTTCGGTTCC 60.181 43.478 25.19 0.00 32.81 3.62
252 253 0.941542 TCTTGCAAGTTTCGGTTCCG 59.058 50.000 25.19 4.74 0.00 4.30
253 254 0.660300 CTTGCAAGTTTCGGTTCCGC 60.660 55.000 18.65 0.00 0.00 5.54
254 255 1.377366 TTGCAAGTTTCGGTTCCGCA 61.377 50.000 6.35 0.00 0.00 5.69
255 256 1.370051 GCAAGTTTCGGTTCCGCAC 60.370 57.895 6.35 5.92 0.00 5.34
256 257 1.782028 GCAAGTTTCGGTTCCGCACT 61.782 55.000 6.35 8.02 0.00 4.40
257 258 0.661020 CAAGTTTCGGTTCCGCACTT 59.339 50.000 17.01 17.01 34.99 3.16
258 259 1.064952 CAAGTTTCGGTTCCGCACTTT 59.935 47.619 18.91 5.82 33.55 2.66
259 260 2.243602 AGTTTCGGTTCCGCACTTTA 57.756 45.000 6.35 0.00 0.00 1.85
260 261 2.774687 AGTTTCGGTTCCGCACTTTAT 58.225 42.857 6.35 0.00 0.00 1.40
261 262 3.143728 AGTTTCGGTTCCGCACTTTATT 58.856 40.909 6.35 0.00 0.00 1.40
262 263 3.566742 AGTTTCGGTTCCGCACTTTATTT 59.433 39.130 6.35 0.00 0.00 1.40
263 264 4.037089 AGTTTCGGTTCCGCACTTTATTTT 59.963 37.500 6.35 0.00 0.00 1.82
264 265 3.546002 TCGGTTCCGCACTTTATTTTG 57.454 42.857 6.35 0.00 0.00 2.44
265 266 2.226912 TCGGTTCCGCACTTTATTTTGG 59.773 45.455 6.35 0.00 0.00 3.28
266 267 2.030628 CGGTTCCGCACTTTATTTTGGT 60.031 45.455 0.00 0.00 0.00 3.67
267 268 3.313690 GGTTCCGCACTTTATTTTGGTG 58.686 45.455 0.00 0.00 0.00 4.17
268 269 3.243602 GGTTCCGCACTTTATTTTGGTGT 60.244 43.478 0.00 0.00 33.96 4.16
269 270 4.023021 GGTTCCGCACTTTATTTTGGTGTA 60.023 41.667 0.00 0.00 33.96 2.90
270 271 5.507650 GGTTCCGCACTTTATTTTGGTGTAA 60.508 40.000 0.00 0.00 33.96 2.41
271 272 5.365403 TCCGCACTTTATTTTGGTGTAAG 57.635 39.130 0.00 0.00 33.96 2.34
272 273 3.917985 CCGCACTTTATTTTGGTGTAAGC 59.082 43.478 0.00 0.00 33.96 3.09
273 274 3.602062 CGCACTTTATTTTGGTGTAAGCG 59.398 43.478 0.00 0.00 36.92 4.68
274 275 4.542735 GCACTTTATTTTGGTGTAAGCGT 58.457 39.130 0.00 0.00 36.92 5.07
275 276 4.381566 GCACTTTATTTTGGTGTAAGCGTG 59.618 41.667 0.00 0.00 36.92 5.34
276 277 4.381566 CACTTTATTTTGGTGTAAGCGTGC 59.618 41.667 0.00 0.00 36.92 5.34
277 278 4.036971 ACTTTATTTTGGTGTAAGCGTGCA 59.963 37.500 0.00 0.00 36.92 4.57
278 279 4.775058 TTATTTTGGTGTAAGCGTGCAT 57.225 36.364 0.00 0.00 36.92 3.96
279 280 2.414058 TTTTGGTGTAAGCGTGCATG 57.586 45.000 0.09 0.09 36.92 4.06
280 281 1.313772 TTTGGTGTAAGCGTGCATGT 58.686 45.000 7.93 0.00 36.92 3.21
281 282 0.590682 TTGGTGTAAGCGTGCATGTG 59.409 50.000 7.93 0.00 36.92 3.21
282 283 0.533978 TGGTGTAAGCGTGCATGTGT 60.534 50.000 7.93 0.00 36.92 3.72
283 284 1.270358 TGGTGTAAGCGTGCATGTGTA 60.270 47.619 7.93 0.00 36.92 2.90
284 285 1.393539 GGTGTAAGCGTGCATGTGTAG 59.606 52.381 7.93 0.00 0.00 2.74
285 286 1.393539 GTGTAAGCGTGCATGTGTAGG 59.606 52.381 7.93 0.00 0.00 3.18
286 287 0.373716 GTAAGCGTGCATGTGTAGGC 59.626 55.000 7.93 7.54 40.85 3.93
287 288 2.665000 AGCGTGCATGTGTAGGCT 59.335 55.556 11.56 11.56 44.63 4.58
288 289 1.742880 AGCGTGCATGTGTAGGCTG 60.743 57.895 15.57 0.00 46.84 4.85
289 290 2.034879 GCGTGCATGTGTAGGCTGT 61.035 57.895 7.93 0.00 38.25 4.40
290 291 1.970917 GCGTGCATGTGTAGGCTGTC 61.971 60.000 7.93 0.00 38.25 3.51
291 292 1.686566 CGTGCATGTGTAGGCTGTCG 61.687 60.000 0.00 0.00 34.05 4.35
292 293 0.670546 GTGCATGTGTAGGCTGTCGT 60.671 55.000 0.00 0.00 34.05 4.34
293 294 0.389817 TGCATGTGTAGGCTGTCGTC 60.390 55.000 0.00 0.00 34.05 4.20
294 295 1.084370 GCATGTGTAGGCTGTCGTCC 61.084 60.000 0.00 0.00 0.00 4.79
295 296 0.460284 CATGTGTAGGCTGTCGTCCC 60.460 60.000 0.00 0.00 0.00 4.46
296 297 1.945354 ATGTGTAGGCTGTCGTCCCG 61.945 60.000 0.00 0.00 0.00 5.14
297 298 2.282674 TGTAGGCTGTCGTCCCGT 60.283 61.111 0.00 0.00 0.00 5.28
298 299 2.181021 GTAGGCTGTCGTCCCGTG 59.819 66.667 0.00 0.00 0.00 4.94
299 300 3.066190 TAGGCTGTCGTCCCGTGG 61.066 66.667 0.00 0.00 0.00 4.94
300 301 3.572447 TAGGCTGTCGTCCCGTGGA 62.572 63.158 0.00 0.00 0.00 4.02
309 310 4.959349 TCCCGTGGACAACCTAGT 57.041 55.556 0.00 0.00 37.04 2.57
311 312 1.843368 TCCCGTGGACAACCTAGTAG 58.157 55.000 0.00 0.00 37.04 2.57
312 313 1.355381 TCCCGTGGACAACCTAGTAGA 59.645 52.381 0.00 0.00 37.04 2.59
313 314 1.749634 CCCGTGGACAACCTAGTAGAG 59.250 57.143 0.00 0.00 37.04 2.43
314 315 2.619849 CCCGTGGACAACCTAGTAGAGA 60.620 54.545 0.00 0.00 37.04 3.10
315 316 3.087031 CCGTGGACAACCTAGTAGAGAA 58.913 50.000 0.00 0.00 37.04 2.87
316 317 3.119566 CCGTGGACAACCTAGTAGAGAAC 60.120 52.174 0.00 0.00 37.04 3.01
317 318 3.504906 CGTGGACAACCTAGTAGAGAACA 59.495 47.826 0.00 0.00 37.04 3.18
318 319 4.615452 CGTGGACAACCTAGTAGAGAACAC 60.615 50.000 0.00 0.04 37.04 3.32
319 320 3.830755 TGGACAACCTAGTAGAGAACACC 59.169 47.826 0.00 0.00 37.04 4.16
320 321 3.195182 GGACAACCTAGTAGAGAACACCC 59.805 52.174 0.00 0.00 0.00 4.61
321 322 3.171528 ACAACCTAGTAGAGAACACCCC 58.828 50.000 0.00 0.00 0.00 4.95
322 323 3.181409 ACAACCTAGTAGAGAACACCCCT 60.181 47.826 0.00 0.00 0.00 4.79
323 324 3.385314 ACCTAGTAGAGAACACCCCTC 57.615 52.381 0.00 0.00 0.00 4.30
324 325 2.927685 ACCTAGTAGAGAACACCCCTCT 59.072 50.000 0.00 0.00 42.97 3.69
325 326 3.337301 ACCTAGTAGAGAACACCCCTCTT 59.663 47.826 0.00 0.00 41.00 2.85
326 327 3.955551 CCTAGTAGAGAACACCCCTCTTC 59.044 52.174 0.00 0.00 41.00 2.87
327 328 3.544698 AGTAGAGAACACCCCTCTTCA 57.455 47.619 0.00 0.00 41.00 3.02
328 329 3.436243 AGTAGAGAACACCCCTCTTCAG 58.564 50.000 0.00 0.00 41.00 3.02
329 330 0.980423 AGAGAACACCCCTCTTCAGC 59.020 55.000 0.00 0.00 37.72 4.26
330 331 0.687354 GAGAACACCCCTCTTCAGCA 59.313 55.000 0.00 0.00 0.00 4.41
331 332 1.280421 GAGAACACCCCTCTTCAGCAT 59.720 52.381 0.00 0.00 0.00 3.79
332 333 2.501723 GAGAACACCCCTCTTCAGCATA 59.498 50.000 0.00 0.00 0.00 3.14
333 334 2.912956 AGAACACCCCTCTTCAGCATAA 59.087 45.455 0.00 0.00 0.00 1.90
334 335 2.789409 ACACCCCTCTTCAGCATAAC 57.211 50.000 0.00 0.00 0.00 1.89
335 336 1.282157 ACACCCCTCTTCAGCATAACC 59.718 52.381 0.00 0.00 0.00 2.85
336 337 1.561542 CACCCCTCTTCAGCATAACCT 59.438 52.381 0.00 0.00 0.00 3.50
337 338 2.771943 CACCCCTCTTCAGCATAACCTA 59.228 50.000 0.00 0.00 0.00 3.08
338 339 2.772515 ACCCCTCTTCAGCATAACCTAC 59.227 50.000 0.00 0.00 0.00 3.18
339 340 2.771943 CCCCTCTTCAGCATAACCTACA 59.228 50.000 0.00 0.00 0.00 2.74
340 341 3.432326 CCCCTCTTCAGCATAACCTACAC 60.432 52.174 0.00 0.00 0.00 2.90
341 342 3.452627 CCCTCTTCAGCATAACCTACACT 59.547 47.826 0.00 0.00 0.00 3.55
342 343 4.442192 CCCTCTTCAGCATAACCTACACTC 60.442 50.000 0.00 0.00 0.00 3.51
343 344 4.404073 CCTCTTCAGCATAACCTACACTCT 59.596 45.833 0.00 0.00 0.00 3.24
344 345 5.594725 CCTCTTCAGCATAACCTACACTCTA 59.405 44.000 0.00 0.00 0.00 2.43
345 346 6.452494 TCTTCAGCATAACCTACACTCTAC 57.548 41.667 0.00 0.00 0.00 2.59
346 347 5.949952 TCTTCAGCATAACCTACACTCTACA 59.050 40.000 0.00 0.00 0.00 2.74
347 348 5.578005 TCAGCATAACCTACACTCTACAC 57.422 43.478 0.00 0.00 0.00 2.90
348 349 4.401519 TCAGCATAACCTACACTCTACACC 59.598 45.833 0.00 0.00 0.00 4.16
349 350 4.402793 CAGCATAACCTACACTCTACACCT 59.597 45.833 0.00 0.00 0.00 4.00
350 351 4.402793 AGCATAACCTACACTCTACACCTG 59.597 45.833 0.00 0.00 0.00 4.00
351 352 4.159879 GCATAACCTACACTCTACACCTGT 59.840 45.833 0.00 0.00 0.00 4.00
352 353 5.651530 CATAACCTACACTCTACACCTGTG 58.348 45.833 0.00 0.00 37.67 3.66
353 354 3.240310 ACCTACACTCTACACCTGTGT 57.760 47.619 8.17 8.17 46.87 3.72
354 355 3.573695 ACCTACACTCTACACCTGTGTT 58.426 45.455 8.41 0.00 41.83 3.32
355 356 3.965347 ACCTACACTCTACACCTGTGTTT 59.035 43.478 8.41 0.00 41.83 2.83
356 357 4.202223 ACCTACACTCTACACCTGTGTTTG 60.202 45.833 8.41 2.90 41.83 2.93
357 358 4.038763 CCTACACTCTACACCTGTGTTTGA 59.961 45.833 8.41 6.89 41.83 2.69
358 359 4.060038 ACACTCTACACCTGTGTTTGAG 57.940 45.455 21.06 21.06 41.83 3.02
359 360 3.704566 ACACTCTACACCTGTGTTTGAGA 59.295 43.478 25.64 15.83 41.83 3.27
360 361 4.345257 ACACTCTACACCTGTGTTTGAGAT 59.655 41.667 25.64 16.51 41.83 2.75
361 362 5.163301 ACACTCTACACCTGTGTTTGAGATT 60.163 40.000 25.64 15.60 41.83 2.40
362 363 5.760253 CACTCTACACCTGTGTTTGAGATTT 59.240 40.000 25.64 11.38 41.83 2.17
363 364 6.260936 CACTCTACACCTGTGTTTGAGATTTT 59.739 38.462 25.64 11.15 41.83 1.82
364 365 6.260936 ACTCTACACCTGTGTTTGAGATTTTG 59.739 38.462 25.64 10.08 41.83 2.44
365 366 6.119536 TCTACACCTGTGTTTGAGATTTTGT 58.880 36.000 8.41 0.00 41.83 2.83
366 367 5.659440 ACACCTGTGTTTGAGATTTTGTT 57.341 34.783 0.00 0.00 41.83 2.83
367 368 6.036577 ACACCTGTGTTTGAGATTTTGTTT 57.963 33.333 0.00 0.00 41.83 2.83
368 369 6.099341 ACACCTGTGTTTGAGATTTTGTTTC 58.901 36.000 0.00 0.00 41.83 2.78
369 370 6.071391 ACACCTGTGTTTGAGATTTTGTTTCT 60.071 34.615 0.00 0.00 41.83 2.52
370 371 6.473455 CACCTGTGTTTGAGATTTTGTTTCTC 59.527 38.462 0.00 0.00 40.06 2.87
371 372 6.152661 ACCTGTGTTTGAGATTTTGTTTCTCA 59.847 34.615 0.00 0.00 45.93 3.27
379 380 6.985117 TGAGATTTTGTTTCTCAAGATTGGG 58.015 36.000 1.08 0.00 44.94 4.12
380 381 6.777091 TGAGATTTTGTTTCTCAAGATTGGGA 59.223 34.615 1.08 0.00 44.94 4.37
381 382 7.452501 TGAGATTTTGTTTCTCAAGATTGGGAT 59.547 33.333 0.00 0.00 44.94 3.85
382 383 7.834803 AGATTTTGTTTCTCAAGATTGGGATC 58.165 34.615 0.00 0.00 37.55 3.36
383 384 7.673082 AGATTTTGTTTCTCAAGATTGGGATCT 59.327 33.333 0.00 0.00 44.51 2.75
395 396 6.461110 AGATTGGGATCTTTTGTTGCATAG 57.539 37.500 0.00 0.00 39.63 2.23
396 397 5.361857 AGATTGGGATCTTTTGTTGCATAGG 59.638 40.000 0.00 0.00 39.63 2.57
397 398 4.046286 TGGGATCTTTTGTTGCATAGGT 57.954 40.909 0.00 0.00 0.00 3.08
398 399 4.415596 TGGGATCTTTTGTTGCATAGGTT 58.584 39.130 0.00 0.00 0.00 3.50
399 400 4.220382 TGGGATCTTTTGTTGCATAGGTTG 59.780 41.667 0.00 0.00 0.00 3.77
400 401 4.462483 GGGATCTTTTGTTGCATAGGTTGA 59.538 41.667 0.00 0.00 0.00 3.18
401 402 5.402398 GGATCTTTTGTTGCATAGGTTGAC 58.598 41.667 0.00 0.00 0.00 3.18
402 403 5.183904 GGATCTTTTGTTGCATAGGTTGACT 59.816 40.000 0.00 0.00 0.00 3.41
403 404 6.294731 GGATCTTTTGTTGCATAGGTTGACTT 60.295 38.462 0.00 0.00 0.00 3.01
404 405 6.463995 TCTTTTGTTGCATAGGTTGACTTT 57.536 33.333 0.00 0.00 0.00 2.66
405 406 6.872920 TCTTTTGTTGCATAGGTTGACTTTT 58.127 32.000 0.00 0.00 0.00 2.27
406 407 6.756074 TCTTTTGTTGCATAGGTTGACTTTTG 59.244 34.615 0.00 0.00 0.00 2.44
407 408 5.843673 TTGTTGCATAGGTTGACTTTTGA 57.156 34.783 0.00 0.00 0.00 2.69
408 409 6.403866 TTGTTGCATAGGTTGACTTTTGAT 57.596 33.333 0.00 0.00 0.00 2.57
409 410 5.771469 TGTTGCATAGGTTGACTTTTGATG 58.229 37.500 0.00 0.00 0.00 3.07
410 411 4.439305 TGCATAGGTTGACTTTTGATGC 57.561 40.909 0.00 0.00 38.89 3.91
411 412 3.825585 TGCATAGGTTGACTTTTGATGCA 59.174 39.130 2.68 2.68 44.23 3.96
412 413 4.280425 TGCATAGGTTGACTTTTGATGCAA 59.720 37.500 4.28 0.00 43.67 4.08
413 414 4.860907 GCATAGGTTGACTTTTGATGCAAG 59.139 41.667 0.00 0.00 38.43 4.01
414 415 5.565439 GCATAGGTTGACTTTTGATGCAAGT 60.565 40.000 0.00 0.00 38.43 3.16
415 416 6.449698 CATAGGTTGACTTTTGATGCAAGTT 58.550 36.000 0.00 0.00 34.49 2.66
416 417 4.936891 AGGTTGACTTTTGATGCAAGTTC 58.063 39.130 0.00 0.00 34.49 3.01
417 418 4.646492 AGGTTGACTTTTGATGCAAGTTCT 59.354 37.500 0.00 0.00 34.49 3.01
418 419 5.127682 AGGTTGACTTTTGATGCAAGTTCTT 59.872 36.000 0.00 0.00 34.49 2.52
419 420 6.321181 AGGTTGACTTTTGATGCAAGTTCTTA 59.679 34.615 0.00 0.00 34.49 2.10
420 421 7.014615 AGGTTGACTTTTGATGCAAGTTCTTAT 59.985 33.333 0.00 0.00 34.49 1.73
421 422 7.653311 GGTTGACTTTTGATGCAAGTTCTTATT 59.347 33.333 0.00 0.00 34.49 1.40
422 423 9.034544 GTTGACTTTTGATGCAAGTTCTTATTT 57.965 29.630 0.00 0.00 34.49 1.40
423 424 9.598517 TTGACTTTTGATGCAAGTTCTTATTTT 57.401 25.926 0.00 0.00 34.49 1.82
424 425 9.598517 TGACTTTTGATGCAAGTTCTTATTTTT 57.401 25.926 0.00 0.00 34.49 1.94
448 449 7.972832 TTTTTGAAGATAAAAGGTAGCTCGA 57.027 32.000 0.00 0.00 31.80 4.04
449 450 7.596749 TTTTGAAGATAAAAGGTAGCTCGAG 57.403 36.000 8.45 8.45 0.00 4.04
450 451 5.263968 TGAAGATAAAAGGTAGCTCGAGG 57.736 43.478 15.58 0.00 0.00 4.63
451 452 3.737032 AGATAAAAGGTAGCTCGAGGC 57.263 47.619 15.58 6.66 42.19 4.70
452 453 2.365941 AGATAAAAGGTAGCTCGAGGCC 59.634 50.000 15.58 0.00 43.05 5.19
453 454 1.861982 TAAAAGGTAGCTCGAGGCCT 58.138 50.000 15.58 3.86 43.05 5.19
454 455 1.861982 AAAAGGTAGCTCGAGGCCTA 58.138 50.000 15.58 5.09 43.05 3.93
455 456 1.112950 AAAGGTAGCTCGAGGCCTAC 58.887 55.000 15.58 16.61 43.05 3.18
456 457 0.756070 AAGGTAGCTCGAGGCCTACC 60.756 60.000 28.45 28.45 43.05 3.18
472 473 6.319141 GGCCTACCTTATATTTCAAAGCAG 57.681 41.667 0.00 0.00 0.00 4.24
473 474 5.241728 GGCCTACCTTATATTTCAAAGCAGG 59.758 44.000 0.00 0.00 31.49 4.85
474 475 5.278512 GCCTACCTTATATTTCAAAGCAGGC 60.279 44.000 9.37 9.37 39.81 4.85
475 476 4.900635 ACCTTATATTTCAAAGCAGGCG 57.099 40.909 0.00 0.00 0.00 5.52
476 477 3.066760 ACCTTATATTTCAAAGCAGGCGC 59.933 43.478 0.00 0.00 38.99 6.53
477 478 3.291585 CTTATATTTCAAAGCAGGCGCG 58.708 45.455 0.00 0.00 45.49 6.86
478 479 1.378531 ATATTTCAAAGCAGGCGCGA 58.621 45.000 12.10 0.00 45.49 5.87
479 480 0.726827 TATTTCAAAGCAGGCGCGAG 59.273 50.000 12.10 0.00 45.49 5.03
501 502 4.768968 AGCCTGATGCAAGTTCTTATTGTT 59.231 37.500 0.00 0.00 44.83 2.83
504 505 7.123247 AGCCTGATGCAAGTTCTTATTGTTTAT 59.877 33.333 0.00 0.00 44.83 1.40
508 509 9.013229 TGATGCAAGTTCTTATTGTTTATCACT 57.987 29.630 0.00 0.00 0.00 3.41
590 591 8.728088 AGACATTTTAATTTCTTACTGTTGCG 57.272 30.769 0.00 0.00 0.00 4.85
592 593 9.601971 GACATTTTAATTTCTTACTGTTGCGTA 57.398 29.630 0.00 0.00 0.00 4.42
598 599 5.994887 TTTCTTACTGTTGCGTACATGTT 57.005 34.783 2.30 0.00 35.85 2.71
630 631 8.500837 TGTGTTAAGAGAAATGTTTATTTGCG 57.499 30.769 0.00 0.00 36.66 4.85
631 632 7.114247 TGTGTTAAGAGAAATGTTTATTTGCGC 59.886 33.333 0.00 0.00 36.66 6.09
632 633 7.114247 GTGTTAAGAGAAATGTTTATTTGCGCA 59.886 33.333 5.66 5.66 36.66 6.09
635 636 5.953183 AGAGAAATGTTTATTTGCGCATCA 58.047 33.333 12.75 0.26 36.66 3.07
636 637 6.567050 AGAGAAATGTTTATTTGCGCATCAT 58.433 32.000 12.75 9.58 36.66 2.45
637 638 6.474427 AGAGAAATGTTTATTTGCGCATCATG 59.526 34.615 12.75 0.00 36.66 3.07
642 643 6.867799 TGTTTATTTGCGCATCATGTTAAG 57.132 33.333 12.75 0.00 0.00 1.85
643 644 5.288232 TGTTTATTTGCGCATCATGTTAAGC 59.712 36.000 12.75 6.22 0.00 3.09
702 757 8.928733 CAATATTTCTGTTGCATATATTTGGGC 58.071 33.333 0.00 0.00 0.00 5.36
762 817 2.359850 TGCGCGGCCTCTGATTTT 60.360 55.556 8.83 0.00 0.00 1.82
764 819 2.100991 CGCGGCCTCTGATTTTGC 59.899 61.111 0.00 0.00 0.00 3.68
857 921 4.112634 CAGTTGCTGATAACGCTAGCTAA 58.887 43.478 13.93 0.00 38.25 3.09
870 934 3.460857 CTAGCTAACCCACTTGCTAGG 57.539 52.381 11.63 0.00 46.45 3.02
982 1046 1.004918 CGAAGAAACGAGGGCCACT 60.005 57.895 6.18 0.00 35.09 4.00
1038 1102 1.303888 AAGCCAGCCATCACACAGG 60.304 57.895 0.00 0.00 0.00 4.00
1173 1237 2.048503 CCCACCGTCGTGAGGTTC 60.049 66.667 0.00 0.00 43.14 3.62
1247 1316 4.060038 GCATTTGGCGCCACAGCT 62.060 61.111 32.95 11.33 36.60 4.24
1524 1597 1.546923 CCCGGCCCGTTAAATCTTTTT 59.453 47.619 0.85 0.00 0.00 1.94
1590 1663 2.162408 GTCAGGAAGAAAATCTTGCCCG 59.838 50.000 7.83 1.26 44.58 6.13
1606 1679 2.510238 CGCCTCTGCCCTCTTTCG 60.510 66.667 0.00 0.00 0.00 3.46
1614 1687 1.448717 GCCCTCTTTCGTCCAGAGC 60.449 63.158 3.59 0.00 37.11 4.09
1685 1758 7.393841 TCTAAGAACTTAGAAGGCACTACTC 57.606 40.000 18.21 0.00 45.93 2.59
1693 1766 4.664150 AGAAGGCACTACTCTCTATTGC 57.336 45.455 0.00 0.00 38.49 3.56
1702 1775 6.734137 CACTACTCTCTATTGCTCCTGTAAG 58.266 44.000 0.00 0.00 0.00 2.34
1707 1780 6.265196 ACTCTCTATTGCTCCTGTAAGATCTG 59.735 42.308 0.00 0.00 34.07 2.90
1732 1808 6.357766 GCCGTTTTGTACAAACACAATACTAC 59.642 38.462 20.43 11.39 37.87 2.73
1733 1809 7.632721 CCGTTTTGTACAAACACAATACTACT 58.367 34.615 20.43 0.00 37.87 2.57
1734 1810 8.763356 CCGTTTTGTACAAACACAATACTACTA 58.237 33.333 20.43 0.00 37.87 1.82
1735 1811 9.787626 CGTTTTGTACAAACACAATACTACTAG 57.212 33.333 20.43 0.00 37.87 2.57
1823 1899 5.302568 TCTGTTCAATTCCACTGAAAATGCT 59.697 36.000 0.00 0.00 34.68 3.79
1870 1947 4.350368 TTCATGGAGAAGCACAACACTA 57.650 40.909 0.00 0.00 0.00 2.74
1876 1953 3.243907 GGAGAAGCACAACACTAGTCACT 60.244 47.826 0.00 0.00 0.00 3.41
1880 1957 1.787155 GCACAACACTAGTCACTGTCG 59.213 52.381 0.00 0.00 0.00 4.35
1943 2020 7.101054 TGCACCTTTAGTACCTAAATACAGTG 58.899 38.462 0.00 0.00 35.72 3.66
1955 2032 6.206829 ACCTAAATACAGTGCTTTCCTTGTTC 59.793 38.462 0.00 0.00 0.00 3.18
1971 2048 6.811954 TCCTTGTTCCCAGATTTGTAAAAAC 58.188 36.000 0.00 0.00 0.00 2.43
2039 2116 1.308069 ACATTCCAGAAAGCGCGCAT 61.308 50.000 35.10 20.88 0.00 4.73
2212 2292 6.402222 AGATTGTGCAAACTTTAAAACACCA 58.598 32.000 0.00 0.00 0.00 4.17
2215 2295 5.724328 TGTGCAAACTTTAAAACACCATCA 58.276 33.333 0.00 0.00 0.00 3.07
2259 2340 8.380743 TGCATTTTCTTCGATATTTTCTTTCG 57.619 30.769 0.00 0.00 0.00 3.46
2262 2343 9.000018 CATTTTCTTCGATATTTTCTTTCGTCC 58.000 33.333 0.00 0.00 34.60 4.79
2326 2411 2.816087 CACATCAACCACTCCCTTTCTG 59.184 50.000 0.00 0.00 0.00 3.02
2338 2423 2.642311 TCCCTTTCTGCATGACAAGGTA 59.358 45.455 0.00 0.00 34.28 3.08
2355 2440 0.035458 GTAGCACTGGTTGGTCTGCT 59.965 55.000 0.00 0.00 37.13 4.24
2405 2490 8.078060 TCTTGAGATGGACATCACAACTATTA 57.922 34.615 17.29 1.71 41.27 0.98
2726 2866 4.762289 AACATTGTACTCCCTCTGATCC 57.238 45.455 0.00 0.00 0.00 3.36
2739 2879 7.293299 ACTCCCTCTGATCCATATTAATTGTCA 59.707 37.037 0.00 0.00 0.00 3.58
2742 2882 7.389884 CCCTCTGATCCATATTAATTGTCACAG 59.610 40.741 0.00 0.00 0.00 3.66
2758 2898 4.878971 TGTCACAGCTTTAGCACAACTTTA 59.121 37.500 4.33 0.00 45.16 1.85
2792 2932 6.291377 TGAGTTGAAGAGCTTTGTGTTCTAT 58.709 36.000 0.00 0.00 35.11 1.98
2815 2955 4.991153 AGTGAGACATGATCATACGTGT 57.009 40.909 8.15 3.32 41.81 4.49
2889 3029 5.885230 ACATACATTGTTGATCACAGTGG 57.115 39.130 18.09 8.56 45.34 4.00
2949 3095 3.480470 TCAGGTTCCAAGAAGCAGAAAG 58.520 45.455 9.01 0.00 0.00 2.62
3025 3171 2.039084 AGGACTAAGCAAAGACCCACTG 59.961 50.000 3.80 0.00 32.48 3.66
3085 3231 2.681064 GAAGCCCCAGCATTGCCA 60.681 61.111 4.70 0.00 43.56 4.92
3246 3392 2.669113 CGGATCGGTACAGTTCGTTCAA 60.669 50.000 0.00 0.00 0.00 2.69
3251 3397 3.309410 TCGGTACAGTTCGTTCAAAAACC 59.691 43.478 0.00 0.00 31.27 3.27
3291 3437 3.425193 GGATTGTGCTGTTTTAAGTTGCG 59.575 43.478 0.00 0.00 0.00 4.85
3292 3438 2.483583 TGTGCTGTTTTAAGTTGCGG 57.516 45.000 0.00 0.00 0.00 5.69
3294 3440 2.423892 TGTGCTGTTTTAAGTTGCGGAA 59.576 40.909 0.00 0.00 0.00 4.30
3324 3473 6.896969 ACTTGTTTTCAAAAATGGTGTTGTG 58.103 32.000 0.00 0.00 39.47 3.33
3372 3521 1.897615 GGATGCTGCAGAGATGGCC 60.898 63.158 20.43 0.00 0.00 5.36
3474 3748 8.783093 TCAGGACATGTACTAGTTTTCAAAATG 58.217 33.333 11.14 0.00 0.00 2.32
3765 4040 1.801913 CGACCTGTCGCCTTTCTCG 60.802 63.158 6.77 0.00 46.50 4.04
3801 4076 3.744719 TCGTCGTCCAGGAAGCGG 61.745 66.667 15.32 3.63 0.00 5.52
3879 4154 2.262915 GACACCTGGCTGGAGACG 59.737 66.667 18.12 5.06 39.71 4.18
4011 4286 4.477975 CTGGACGACGTCGGGCTC 62.478 72.222 37.89 26.70 44.95 4.70
4131 4406 5.266788 TCCAACCGGAGAAAATAGACTAGA 58.733 41.667 9.46 0.00 35.91 2.43
4132 4407 5.126707 TCCAACCGGAGAAAATAGACTAGAC 59.873 44.000 9.46 0.00 35.91 2.59
4133 4408 4.897025 ACCGGAGAAAATAGACTAGACG 57.103 45.455 9.46 0.00 0.00 4.18
4134 4409 4.521146 ACCGGAGAAAATAGACTAGACGA 58.479 43.478 9.46 0.00 0.00 4.20
4135 4410 4.575645 ACCGGAGAAAATAGACTAGACGAG 59.424 45.833 9.46 0.00 0.00 4.18
4136 4411 4.575645 CCGGAGAAAATAGACTAGACGAGT 59.424 45.833 0.00 0.00 42.90 4.18
4137 4412 5.503498 CGGAGAAAATAGACTAGACGAGTG 58.497 45.833 0.00 0.00 39.06 3.51
4138 4413 5.064962 CGGAGAAAATAGACTAGACGAGTGT 59.935 44.000 0.00 0.00 39.06 3.55
4189 4465 3.425577 ACGCAAATGATAATGCCACAG 57.574 42.857 0.00 0.00 39.39 3.66
4209 4485 7.215085 CCACAGGTATGGTATTAAGTAAGACC 58.785 42.308 7.75 7.75 45.35 3.85
4239 4515 3.181500 CGTTTTTAGGCCCTCAACTATGC 60.181 47.826 0.00 0.00 0.00 3.14
4248 4524 1.202417 CCTCAACTATGCGATCGGTGT 60.202 52.381 18.30 0.00 0.00 4.16
4251 4527 1.588404 CAACTATGCGATCGGTGTCAC 59.412 52.381 18.30 0.00 0.00 3.67
4265 4541 3.420576 CGGTGTCACATTTTTGTAAAGCG 59.579 43.478 5.12 0.00 0.00 4.68
4277 4553 1.269673 TGTAAAGCGAGGCACGTACAA 60.270 47.619 6.15 0.00 44.60 2.41
4336 4612 4.210746 CACAACATAGAAGATCTGGCATCG 59.789 45.833 0.00 0.00 0.00 3.84
4345 4621 2.021068 ATCTGGCATCGTCCAGGTCG 62.021 60.000 16.71 0.00 43.93 4.79
4403 4679 2.071540 GCTTACCTAACCACCAACGTC 58.928 52.381 0.00 0.00 0.00 4.34
4408 4684 0.599558 CTAACCACCAACGTCTCGGA 59.400 55.000 5.69 0.00 0.00 4.55
4423 4699 1.126846 CTCGGATTGTGTCTTTGCGTC 59.873 52.381 0.00 0.00 0.00 5.19
4437 4713 2.254546 TGCGTCAGAAAGGACAACAT 57.745 45.000 0.00 0.00 37.66 2.71
4440 4716 2.413453 GCGTCAGAAAGGACAACATCTC 59.587 50.000 0.00 0.00 37.66 2.75
4517 4793 3.366985 CCCAGAATTTTTAGTTCGGCACC 60.367 47.826 0.00 0.00 0.00 5.01
4535 4811 2.683475 GGCTGGGCAACATAGGGT 59.317 61.111 0.00 0.00 39.74 4.34
4538 4814 0.323360 GCTGGGCAACATAGGGTCAA 60.323 55.000 0.00 0.00 39.74 3.18
4543 4819 0.323360 GCAACATAGGGTCAAGGCCA 60.323 55.000 5.01 0.00 0.00 5.36
4561 4837 3.071602 GGCCAGCCTTAACATCATAGAGA 59.928 47.826 0.00 0.00 0.00 3.10
4580 4856 1.592669 CCCTAGTGCGATTGAGGCG 60.593 63.158 0.00 0.00 0.00 5.52
4593 4869 4.671377 GATTGAGGCGCAATGAACATTAA 58.329 39.130 21.25 0.00 46.90 1.40
4601 4877 7.711846 AGGCGCAATGAACATTAACATATTAA 58.288 30.769 10.83 0.00 34.78 1.40
4747 5148 9.209175 GATCTATTGTTATGGTGATTAGTGTCC 57.791 37.037 0.00 0.00 0.00 4.02
4965 5366 4.706842 TCAATTCCTTGTCCCTATAGCC 57.293 45.455 0.00 0.00 33.87 3.93
5116 5517 5.076182 TGGAAGTGGCATGAAAATTACTCA 58.924 37.500 0.00 0.00 0.00 3.41
5123 5524 6.694411 GTGGCATGAAAATTACTCAATGCTAG 59.306 38.462 0.00 0.00 32.57 3.42
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 1.335506 CCCACAAACCGGAATCAAACG 60.336 52.381 9.46 0.00 0.00 3.60
25 26 1.957877 TCCCACAAACCGGAATCAAAC 59.042 47.619 9.46 0.00 0.00 2.93
26 27 2.366640 TCCCACAAACCGGAATCAAA 57.633 45.000 9.46 0.00 0.00 2.69
27 28 2.366640 TTCCCACAAACCGGAATCAA 57.633 45.000 9.46 0.00 33.14 2.57
28 29 2.366640 TTTCCCACAAACCGGAATCA 57.633 45.000 9.46 0.00 37.96 2.57
29 30 3.257127 TGATTTTCCCACAAACCGGAATC 59.743 43.478 9.46 3.11 37.96 2.52
30 31 3.235200 TGATTTTCCCACAAACCGGAAT 58.765 40.909 9.46 0.00 37.96 3.01
31 32 2.667470 TGATTTTCCCACAAACCGGAA 58.333 42.857 9.46 0.00 36.35 4.30
32 33 2.366640 TGATTTTCCCACAAACCGGA 57.633 45.000 9.46 0.00 0.00 5.14
33 34 2.353605 CCATGATTTTCCCACAAACCGG 60.354 50.000 0.00 0.00 0.00 5.28
34 35 2.298729 ACCATGATTTTCCCACAAACCG 59.701 45.455 0.00 0.00 0.00 4.44
35 36 3.306710 GGACCATGATTTTCCCACAAACC 60.307 47.826 0.00 0.00 0.00 3.27
36 37 3.613910 CGGACCATGATTTTCCCACAAAC 60.614 47.826 0.00 0.00 0.00 2.93
37 38 2.560542 CGGACCATGATTTTCCCACAAA 59.439 45.455 0.00 0.00 0.00 2.83
38 39 2.166829 CGGACCATGATTTTCCCACAA 58.833 47.619 0.00 0.00 0.00 3.33
39 40 1.615651 CCGGACCATGATTTTCCCACA 60.616 52.381 0.00 0.00 0.00 4.17
40 41 1.102978 CCGGACCATGATTTTCCCAC 58.897 55.000 0.00 0.00 0.00 4.61
41 42 0.995803 TCCGGACCATGATTTTCCCA 59.004 50.000 0.00 0.00 0.00 4.37
42 43 1.340600 TGTCCGGACCATGATTTTCCC 60.341 52.381 31.19 2.28 0.00 3.97
43 44 2.017049 CTGTCCGGACCATGATTTTCC 58.983 52.381 31.19 2.51 0.00 3.13
44 45 1.401905 GCTGTCCGGACCATGATTTTC 59.598 52.381 31.19 3.08 0.00 2.29
45 46 1.463674 GCTGTCCGGACCATGATTTT 58.536 50.000 31.19 0.00 0.00 1.82
46 47 0.744414 CGCTGTCCGGACCATGATTT 60.744 55.000 31.19 0.00 0.00 2.17
47 48 1.153369 CGCTGTCCGGACCATGATT 60.153 57.895 31.19 0.00 0.00 2.57
48 49 2.298158 GACGCTGTCCGGACCATGAT 62.298 60.000 31.19 13.32 42.52 2.45
49 50 2.994995 ACGCTGTCCGGACCATGA 60.995 61.111 31.19 12.20 42.52 3.07
50 51 2.509336 GACGCTGTCCGGACCATG 60.509 66.667 31.19 21.50 42.52 3.66
51 52 4.129737 CGACGCTGTCCGGACCAT 62.130 66.667 31.19 14.06 42.52 3.55
59 60 2.319011 TATCTGTCCGCGACGCTGTC 62.319 60.000 19.02 9.89 34.95 3.51
60 61 2.404186 TATCTGTCCGCGACGCTGT 61.404 57.895 19.02 0.00 34.95 4.40
61 62 1.939785 GTATCTGTCCGCGACGCTG 60.940 63.158 19.02 12.03 34.95 5.18
62 63 2.324332 CTGTATCTGTCCGCGACGCT 62.324 60.000 19.02 0.00 34.95 5.07
63 64 1.939785 CTGTATCTGTCCGCGACGC 60.940 63.158 8.23 10.49 34.95 5.19
64 65 1.298413 CCTGTATCTGTCCGCGACG 60.298 63.158 8.23 0.00 34.95 5.12
65 66 0.248539 GTCCTGTATCTGTCCGCGAC 60.249 60.000 8.23 4.50 0.00 5.19
66 67 1.381928 GGTCCTGTATCTGTCCGCGA 61.382 60.000 8.23 0.00 0.00 5.87
67 68 1.065928 GGTCCTGTATCTGTCCGCG 59.934 63.158 0.00 0.00 0.00 6.46
68 69 1.065928 CGGTCCTGTATCTGTCCGC 59.934 63.158 0.00 0.00 0.00 5.54
69 70 1.065928 GCGGTCCTGTATCTGTCCG 59.934 63.158 0.00 0.00 40.72 4.79
70 71 1.065928 CGCGGTCCTGTATCTGTCC 59.934 63.158 0.00 0.00 0.00 4.02
71 72 0.172803 AACGCGGTCCTGTATCTGTC 59.827 55.000 12.47 0.00 0.00 3.51
72 73 0.108804 CAACGCGGTCCTGTATCTGT 60.109 55.000 12.47 0.00 0.00 3.41
73 74 0.806102 CCAACGCGGTCCTGTATCTG 60.806 60.000 12.47 0.00 0.00 2.90
74 75 0.968901 TCCAACGCGGTCCTGTATCT 60.969 55.000 12.47 0.00 35.57 1.98
75 76 0.104304 ATCCAACGCGGTCCTGTATC 59.896 55.000 12.47 0.00 35.57 2.24
76 77 0.179084 CATCCAACGCGGTCCTGTAT 60.179 55.000 12.47 0.00 35.57 2.29
77 78 1.216977 CATCCAACGCGGTCCTGTA 59.783 57.895 12.47 0.00 35.57 2.74
78 79 2.047274 CATCCAACGCGGTCCTGT 60.047 61.111 12.47 0.00 35.57 4.00
79 80 2.819595 CCATCCAACGCGGTCCTG 60.820 66.667 12.47 0.00 35.57 3.86
80 81 4.778143 GCCATCCAACGCGGTCCT 62.778 66.667 12.47 0.00 35.57 3.85
81 82 4.778143 AGCCATCCAACGCGGTCC 62.778 66.667 12.47 0.00 35.57 4.46
82 83 2.253414 GAAAGCCATCCAACGCGGTC 62.253 60.000 12.47 0.00 35.57 4.79
83 84 2.282180 AAAGCCATCCAACGCGGT 60.282 55.556 12.47 0.00 35.57 5.68
84 85 2.485122 GAAAGCCATCCAACGCGG 59.515 61.111 12.47 0.00 0.00 6.46
85 86 2.098298 CGAAAGCCATCCAACGCG 59.902 61.111 3.53 3.53 0.00 6.01
86 87 1.154225 CACGAAAGCCATCCAACGC 60.154 57.895 0.00 0.00 0.00 4.84
87 88 1.234615 ACCACGAAAGCCATCCAACG 61.235 55.000 0.00 0.00 0.00 4.10
88 89 0.958822 AACCACGAAAGCCATCCAAC 59.041 50.000 0.00 0.00 0.00 3.77
89 90 1.243902 GAACCACGAAAGCCATCCAA 58.756 50.000 0.00 0.00 0.00 3.53
90 91 0.953471 CGAACCACGAAAGCCATCCA 60.953 55.000 0.00 0.00 45.77 3.41
91 92 1.644786 CCGAACCACGAAAGCCATCC 61.645 60.000 0.00 0.00 45.77 3.51
92 93 0.672401 TCCGAACCACGAAAGCCATC 60.672 55.000 0.00 0.00 45.77 3.51
93 94 0.953960 GTCCGAACCACGAAAGCCAT 60.954 55.000 0.00 0.00 45.77 4.40
94 95 1.595929 GTCCGAACCACGAAAGCCA 60.596 57.895 0.00 0.00 45.77 4.75
95 96 1.566018 CTGTCCGAACCACGAAAGCC 61.566 60.000 0.00 0.00 45.77 4.35
96 97 1.860078 CTGTCCGAACCACGAAAGC 59.140 57.895 0.00 0.00 45.77 3.51
97 98 0.600255 AGCTGTCCGAACCACGAAAG 60.600 55.000 0.00 0.00 45.77 2.62
98 99 0.878523 CAGCTGTCCGAACCACGAAA 60.879 55.000 5.25 0.00 45.77 3.46
99 100 1.300620 CAGCTGTCCGAACCACGAA 60.301 57.895 5.25 0.00 45.77 3.85
100 101 2.142357 CTCAGCTGTCCGAACCACGA 62.142 60.000 14.67 0.00 45.77 4.35
101 102 1.734477 CTCAGCTGTCCGAACCACG 60.734 63.158 14.67 0.00 42.18 4.94
102 103 0.667792 GACTCAGCTGTCCGAACCAC 60.668 60.000 14.67 0.00 0.00 4.16
103 104 1.666011 GACTCAGCTGTCCGAACCA 59.334 57.895 14.67 0.00 0.00 3.67
104 105 1.079750 GGACTCAGCTGTCCGAACC 60.080 63.158 14.67 6.50 45.69 3.62
105 106 4.580835 GGACTCAGCTGTCCGAAC 57.419 61.111 14.67 1.02 45.69 3.95
110 111 1.142748 CCATCCGGACTCAGCTGTC 59.857 63.158 14.67 4.54 36.31 3.51
111 112 1.194781 AACCATCCGGACTCAGCTGT 61.195 55.000 14.67 0.00 35.59 4.40
112 113 0.742281 CAACCATCCGGACTCAGCTG 60.742 60.000 6.12 7.63 35.59 4.24
113 114 1.599047 CAACCATCCGGACTCAGCT 59.401 57.895 6.12 0.00 35.59 4.24
114 115 2.109126 GCAACCATCCGGACTCAGC 61.109 63.158 6.12 3.84 35.59 4.26
115 116 0.742281 CTGCAACCATCCGGACTCAG 60.742 60.000 6.12 4.17 35.59 3.35
116 117 1.191489 TCTGCAACCATCCGGACTCA 61.191 55.000 6.12 0.00 35.59 3.41
117 118 0.741221 GTCTGCAACCATCCGGACTC 60.741 60.000 6.12 0.00 35.10 3.36
118 119 1.296715 GTCTGCAACCATCCGGACT 59.703 57.895 6.12 0.00 35.10 3.85
119 120 2.100631 CGTCTGCAACCATCCGGAC 61.101 63.158 6.12 0.00 35.59 4.79
120 121 2.264480 CGTCTGCAACCATCCGGA 59.736 61.111 6.61 6.61 35.59 5.14
121 122 2.819595 CCGTCTGCAACCATCCGG 60.820 66.667 0.00 0.00 38.77 5.14
122 123 1.234615 AAACCGTCTGCAACCATCCG 61.235 55.000 0.00 0.00 0.00 4.18
123 124 0.240945 CAAACCGTCTGCAACCATCC 59.759 55.000 0.00 0.00 0.00 3.51
124 125 1.197721 CTCAAACCGTCTGCAACCATC 59.802 52.381 0.00 0.00 0.00 3.51
125 126 1.238439 CTCAAACCGTCTGCAACCAT 58.762 50.000 0.00 0.00 0.00 3.55
126 127 0.817634 CCTCAAACCGTCTGCAACCA 60.818 55.000 0.00 0.00 0.00 3.67
127 128 1.515521 CCCTCAAACCGTCTGCAACC 61.516 60.000 0.00 0.00 0.00 3.77
128 129 0.818040 ACCCTCAAACCGTCTGCAAC 60.818 55.000 0.00 0.00 0.00 4.17
129 130 0.106918 AACCCTCAAACCGTCTGCAA 60.107 50.000 0.00 0.00 0.00 4.08
130 131 0.817634 CAACCCTCAAACCGTCTGCA 60.818 55.000 0.00 0.00 0.00 4.41
131 132 1.515521 CCAACCCTCAAACCGTCTGC 61.516 60.000 0.00 0.00 0.00 4.26
132 133 1.515521 GCCAACCCTCAAACCGTCTG 61.516 60.000 0.00 0.00 0.00 3.51
133 134 1.228154 GCCAACCCTCAAACCGTCT 60.228 57.895 0.00 0.00 0.00 4.18
134 135 0.822121 AAGCCAACCCTCAAACCGTC 60.822 55.000 0.00 0.00 0.00 4.79
135 136 0.396556 AAAGCCAACCCTCAAACCGT 60.397 50.000 0.00 0.00 0.00 4.83
136 137 0.031994 CAAAGCCAACCCTCAAACCG 59.968 55.000 0.00 0.00 0.00 4.44
137 138 0.392706 CCAAAGCCAACCCTCAAACC 59.607 55.000 0.00 0.00 0.00 3.27
138 139 1.341209 CTCCAAAGCCAACCCTCAAAC 59.659 52.381 0.00 0.00 0.00 2.93
139 140 1.216678 TCTCCAAAGCCAACCCTCAAA 59.783 47.619 0.00 0.00 0.00 2.69
140 141 0.850100 TCTCCAAAGCCAACCCTCAA 59.150 50.000 0.00 0.00 0.00 3.02
141 142 1.075601 ATCTCCAAAGCCAACCCTCA 58.924 50.000 0.00 0.00 0.00 3.86
142 143 1.467920 CATCTCCAAAGCCAACCCTC 58.532 55.000 0.00 0.00 0.00 4.30
143 144 0.613012 GCATCTCCAAAGCCAACCCT 60.613 55.000 0.00 0.00 0.00 4.34
144 145 1.893062 GCATCTCCAAAGCCAACCC 59.107 57.895 0.00 0.00 0.00 4.11
150 151 2.019984 CACTAAGGGCATCTCCAAAGC 58.980 52.381 0.00 0.00 36.21 3.51
151 152 3.198635 TCTCACTAAGGGCATCTCCAAAG 59.801 47.826 0.00 0.00 36.21 2.77
152 153 3.181329 TCTCACTAAGGGCATCTCCAAA 58.819 45.455 0.00 0.00 36.21 3.28
153 154 2.768527 CTCTCACTAAGGGCATCTCCAA 59.231 50.000 0.00 0.00 36.21 3.53
154 155 2.023984 TCTCTCACTAAGGGCATCTCCA 60.024 50.000 0.00 0.00 36.21 3.86
155 156 2.627699 CTCTCTCACTAAGGGCATCTCC 59.372 54.545 0.00 0.00 0.00 3.71
156 157 3.561143 TCTCTCTCACTAAGGGCATCTC 58.439 50.000 0.00 0.00 0.00 2.75
157 158 3.678965 TCTCTCTCACTAAGGGCATCT 57.321 47.619 0.00 0.00 0.00 2.90
158 159 4.953940 AATCTCTCTCACTAAGGGCATC 57.046 45.455 0.00 0.00 0.00 3.91
159 160 5.707066 AAAATCTCTCTCACTAAGGGCAT 57.293 39.130 0.00 0.00 0.00 4.40
160 161 5.129485 CCTAAAATCTCTCTCACTAAGGGCA 59.871 44.000 0.00 0.00 0.00 5.36
161 162 5.364157 TCCTAAAATCTCTCTCACTAAGGGC 59.636 44.000 0.00 0.00 0.00 5.19
162 163 6.381420 TGTCCTAAAATCTCTCTCACTAAGGG 59.619 42.308 0.00 0.00 0.00 3.95
163 164 7.411486 TGTCCTAAAATCTCTCTCACTAAGG 57.589 40.000 0.00 0.00 0.00 2.69
164 165 8.690884 TGATGTCCTAAAATCTCTCTCACTAAG 58.309 37.037 0.00 0.00 0.00 2.18
165 166 8.595362 TGATGTCCTAAAATCTCTCTCACTAA 57.405 34.615 0.00 0.00 0.00 2.24
166 167 8.774546 ATGATGTCCTAAAATCTCTCTCACTA 57.225 34.615 0.00 0.00 0.00 2.74
167 168 7.469870 CGATGATGTCCTAAAATCTCTCTCACT 60.470 40.741 0.00 0.00 0.00 3.41
168 169 6.640499 CGATGATGTCCTAAAATCTCTCTCAC 59.360 42.308 0.00 0.00 0.00 3.51
169 170 6.737070 GCGATGATGTCCTAAAATCTCTCTCA 60.737 42.308 0.00 0.00 0.00 3.27
170 171 5.633182 GCGATGATGTCCTAAAATCTCTCTC 59.367 44.000 0.00 0.00 0.00 3.20
171 172 5.537188 GCGATGATGTCCTAAAATCTCTCT 58.463 41.667 0.00 0.00 0.00 3.10
172 173 4.384247 CGCGATGATGTCCTAAAATCTCTC 59.616 45.833 0.00 0.00 0.00 3.20
173 174 4.202161 ACGCGATGATGTCCTAAAATCTCT 60.202 41.667 15.93 0.00 0.00 3.10
174 175 4.051922 ACGCGATGATGTCCTAAAATCTC 58.948 43.478 15.93 0.00 0.00 2.75
175 176 4.060038 ACGCGATGATGTCCTAAAATCT 57.940 40.909 15.93 0.00 0.00 2.40
176 177 4.795970 AACGCGATGATGTCCTAAAATC 57.204 40.909 15.93 0.00 0.00 2.17
177 178 4.730613 GCAAACGCGATGATGTCCTAAAAT 60.731 41.667 15.93 0.00 0.00 1.82
178 179 3.425625 GCAAACGCGATGATGTCCTAAAA 60.426 43.478 15.93 0.00 0.00 1.52
179 180 2.095213 GCAAACGCGATGATGTCCTAAA 59.905 45.455 15.93 0.00 0.00 1.85
180 181 1.663643 GCAAACGCGATGATGTCCTAA 59.336 47.619 15.93 0.00 0.00 2.69
181 182 1.134818 AGCAAACGCGATGATGTCCTA 60.135 47.619 15.93 0.00 0.00 2.94
182 183 0.391661 AGCAAACGCGATGATGTCCT 60.392 50.000 15.93 0.50 0.00 3.85
183 184 1.286501 TAGCAAACGCGATGATGTCC 58.713 50.000 15.93 0.00 0.00 4.02
184 185 2.285220 ACATAGCAAACGCGATGATGTC 59.715 45.455 15.93 0.00 43.02 3.06
185 186 2.279741 ACATAGCAAACGCGATGATGT 58.720 42.857 15.93 14.42 43.02 3.06
186 187 3.323729 AACATAGCAAACGCGATGATG 57.676 42.857 15.93 13.80 43.02 3.07
187 188 3.683989 CAAACATAGCAAACGCGATGAT 58.316 40.909 15.93 13.15 43.02 2.45
188 189 2.727607 GCAAACATAGCAAACGCGATGA 60.728 45.455 15.93 0.00 43.02 2.92
189 190 1.578915 GCAAACATAGCAAACGCGATG 59.421 47.619 15.93 13.05 45.06 3.84
190 191 1.198867 TGCAAACATAGCAAACGCGAT 59.801 42.857 15.93 0.00 39.39 4.58
191 192 0.588737 TGCAAACATAGCAAACGCGA 59.411 45.000 15.93 0.00 39.39 5.87
192 193 3.084686 TGCAAACATAGCAAACGCG 57.915 47.368 3.53 3.53 39.39 6.01
198 199 6.579666 AGAAAAGAGATTGCAAACATAGCA 57.420 33.333 1.71 0.00 40.85 3.49
199 200 8.239998 AGTAAGAAAAGAGATTGCAAACATAGC 58.760 33.333 1.71 0.00 0.00 2.97
202 203 8.854117 AGAAGTAAGAAAAGAGATTGCAAACAT 58.146 29.630 1.71 0.00 0.00 2.71
203 204 8.225603 AGAAGTAAGAAAAGAGATTGCAAACA 57.774 30.769 1.71 0.00 0.00 2.83
204 205 9.600646 GTAGAAGTAAGAAAAGAGATTGCAAAC 57.399 33.333 1.71 0.00 0.00 2.93
205 206 9.561069 AGTAGAAGTAAGAAAAGAGATTGCAAA 57.439 29.630 1.71 0.00 0.00 3.68
206 207 9.561069 AAGTAGAAGTAAGAAAAGAGATTGCAA 57.439 29.630 0.00 0.00 0.00 4.08
207 208 9.561069 AAAGTAGAAGTAAGAAAAGAGATTGCA 57.439 29.630 0.00 0.00 0.00 4.08
212 213 9.262358 GCAAGAAAGTAGAAGTAAGAAAAGAGA 57.738 33.333 0.00 0.00 0.00 3.10
213 214 9.046296 TGCAAGAAAGTAGAAGTAAGAAAAGAG 57.954 33.333 0.00 0.00 0.00 2.85
214 215 8.958119 TGCAAGAAAGTAGAAGTAAGAAAAGA 57.042 30.769 0.00 0.00 0.00 2.52
215 216 9.657121 CTTGCAAGAAAGTAGAAGTAAGAAAAG 57.343 33.333 22.31 0.00 0.00 2.27
216 217 9.174166 ACTTGCAAGAAAGTAGAAGTAAGAAAA 57.826 29.630 32.50 0.00 38.62 2.29
217 218 8.732746 ACTTGCAAGAAAGTAGAAGTAAGAAA 57.267 30.769 32.50 0.00 38.62 2.52
218 219 8.732746 AACTTGCAAGAAAGTAGAAGTAAGAA 57.267 30.769 32.50 0.00 39.48 2.52
219 220 8.732746 AAACTTGCAAGAAAGTAGAAGTAAGA 57.267 30.769 32.50 0.00 39.48 2.10
220 221 7.794349 CGAAACTTGCAAGAAAGTAGAAGTAAG 59.206 37.037 32.50 1.03 39.48 2.34
221 222 7.254658 CCGAAACTTGCAAGAAAGTAGAAGTAA 60.255 37.037 32.50 0.00 39.48 2.24
222 223 6.202188 CCGAAACTTGCAAGAAAGTAGAAGTA 59.798 38.462 32.50 0.00 39.48 2.24
223 224 5.007724 CCGAAACTTGCAAGAAAGTAGAAGT 59.992 40.000 32.50 3.78 39.48 3.01
224 225 5.007724 ACCGAAACTTGCAAGAAAGTAGAAG 59.992 40.000 32.50 13.19 39.48 2.85
225 226 4.879545 ACCGAAACTTGCAAGAAAGTAGAA 59.120 37.500 32.50 0.00 39.48 2.10
226 227 4.448210 ACCGAAACTTGCAAGAAAGTAGA 58.552 39.130 32.50 0.00 39.48 2.59
227 228 4.813296 ACCGAAACTTGCAAGAAAGTAG 57.187 40.909 32.50 17.23 39.48 2.57
228 229 4.035909 GGAACCGAAACTTGCAAGAAAGTA 59.964 41.667 32.50 0.00 39.48 2.24
229 230 3.181490 GGAACCGAAACTTGCAAGAAAGT 60.181 43.478 32.50 17.64 42.21 2.66
230 231 3.372060 GGAACCGAAACTTGCAAGAAAG 58.628 45.455 32.50 18.47 0.00 2.62
231 232 2.223386 CGGAACCGAAACTTGCAAGAAA 60.223 45.455 32.50 0.00 42.83 2.52
232 233 1.332375 CGGAACCGAAACTTGCAAGAA 59.668 47.619 32.50 0.00 42.83 2.52
233 234 0.941542 CGGAACCGAAACTTGCAAGA 59.058 50.000 32.50 0.00 42.83 3.02
234 235 0.660300 GCGGAACCGAAACTTGCAAG 60.660 55.000 24.84 24.84 42.83 4.01
235 236 1.357334 GCGGAACCGAAACTTGCAA 59.643 52.632 17.63 0.00 42.83 4.08
236 237 1.820056 TGCGGAACCGAAACTTGCA 60.820 52.632 17.63 0.44 42.83 4.08
237 238 1.370051 GTGCGGAACCGAAACTTGC 60.370 57.895 17.63 0.00 42.83 4.01
238 239 0.661020 AAGTGCGGAACCGAAACTTG 59.339 50.000 23.50 0.00 42.18 3.16
239 240 1.385528 AAAGTGCGGAACCGAAACTT 58.614 45.000 20.66 20.66 44.05 2.66
240 241 2.243602 TAAAGTGCGGAACCGAAACT 57.756 45.000 17.63 15.20 42.83 2.66
241 242 3.547649 AATAAAGTGCGGAACCGAAAC 57.452 42.857 17.63 13.29 42.83 2.78
242 243 4.291783 CAAAATAAAGTGCGGAACCGAAA 58.708 39.130 17.63 1.20 42.83 3.46
243 244 3.304794 CCAAAATAAAGTGCGGAACCGAA 60.305 43.478 17.63 3.11 42.83 4.30
244 245 2.226912 CCAAAATAAAGTGCGGAACCGA 59.773 45.455 17.63 0.00 42.83 4.69
245 246 2.030628 ACCAAAATAAAGTGCGGAACCG 60.031 45.455 9.00 9.00 43.09 4.44
246 247 3.243602 ACACCAAAATAAAGTGCGGAACC 60.244 43.478 0.00 0.00 34.83 3.62
247 248 3.972403 ACACCAAAATAAAGTGCGGAAC 58.028 40.909 0.00 0.00 34.83 3.62
248 249 5.764131 CTTACACCAAAATAAAGTGCGGAA 58.236 37.500 0.00 0.00 34.83 4.30
249 250 4.320641 GCTTACACCAAAATAAAGTGCGGA 60.321 41.667 0.00 0.00 34.83 5.54
250 251 3.917985 GCTTACACCAAAATAAAGTGCGG 59.082 43.478 0.00 0.00 34.83 5.69
251 252 3.602062 CGCTTACACCAAAATAAAGTGCG 59.398 43.478 0.00 0.00 34.83 5.34
252 253 4.381566 CACGCTTACACCAAAATAAAGTGC 59.618 41.667 0.00 0.00 34.83 4.40
253 254 4.381566 GCACGCTTACACCAAAATAAAGTG 59.618 41.667 0.00 0.00 37.53 3.16
254 255 4.036971 TGCACGCTTACACCAAAATAAAGT 59.963 37.500 0.00 0.00 0.00 2.66
255 256 4.541779 TGCACGCTTACACCAAAATAAAG 58.458 39.130 0.00 0.00 0.00 1.85
256 257 4.569761 TGCACGCTTACACCAAAATAAA 57.430 36.364 0.00 0.00 0.00 1.40
257 258 4.022762 ACATGCACGCTTACACCAAAATAA 60.023 37.500 0.00 0.00 0.00 1.40
258 259 3.504134 ACATGCACGCTTACACCAAAATA 59.496 39.130 0.00 0.00 0.00 1.40
259 260 2.295909 ACATGCACGCTTACACCAAAAT 59.704 40.909 0.00 0.00 0.00 1.82
260 261 1.678627 ACATGCACGCTTACACCAAAA 59.321 42.857 0.00 0.00 0.00 2.44
261 262 1.001924 CACATGCACGCTTACACCAAA 60.002 47.619 0.00 0.00 0.00 3.28
262 263 0.590682 CACATGCACGCTTACACCAA 59.409 50.000 0.00 0.00 0.00 3.67
263 264 0.533978 ACACATGCACGCTTACACCA 60.534 50.000 0.00 0.00 0.00 4.17
264 265 1.393539 CTACACATGCACGCTTACACC 59.606 52.381 0.00 0.00 0.00 4.16
265 266 1.393539 CCTACACATGCACGCTTACAC 59.606 52.381 0.00 0.00 0.00 2.90
266 267 1.720805 CCTACACATGCACGCTTACA 58.279 50.000 0.00 0.00 0.00 2.41
267 268 0.373716 GCCTACACATGCACGCTTAC 59.626 55.000 0.00 0.00 0.00 2.34
268 269 0.249120 AGCCTACACATGCACGCTTA 59.751 50.000 0.00 0.00 0.00 3.09
269 270 1.003355 AGCCTACACATGCACGCTT 60.003 52.632 0.00 0.00 0.00 4.68
270 271 1.742880 CAGCCTACACATGCACGCT 60.743 57.895 0.00 0.00 0.00 5.07
271 272 1.970917 GACAGCCTACACATGCACGC 61.971 60.000 0.00 0.00 0.00 5.34
272 273 1.686566 CGACAGCCTACACATGCACG 61.687 60.000 0.00 0.00 0.00 5.34
273 274 0.670546 ACGACAGCCTACACATGCAC 60.671 55.000 0.00 0.00 0.00 4.57
274 275 0.389817 GACGACAGCCTACACATGCA 60.390 55.000 0.00 0.00 0.00 3.96
275 276 1.084370 GGACGACAGCCTACACATGC 61.084 60.000 0.00 0.00 0.00 4.06
276 277 0.460284 GGGACGACAGCCTACACATG 60.460 60.000 0.00 0.00 0.00 3.21
277 278 1.898154 GGGACGACAGCCTACACAT 59.102 57.895 0.00 0.00 0.00 3.21
278 279 3.373226 GGGACGACAGCCTACACA 58.627 61.111 0.00 0.00 0.00 3.72
292 293 1.355381 TCTACTAGGTTGTCCACGGGA 59.645 52.381 0.00 0.00 35.89 5.14
293 294 1.749634 CTCTACTAGGTTGTCCACGGG 59.250 57.143 0.00 0.00 35.89 5.28
294 295 2.719739 TCTCTACTAGGTTGTCCACGG 58.280 52.381 0.00 0.00 35.89 4.94
295 296 3.504906 TGTTCTCTACTAGGTTGTCCACG 59.495 47.826 0.00 0.00 35.89 4.94
296 297 4.321824 GGTGTTCTCTACTAGGTTGTCCAC 60.322 50.000 0.00 0.00 35.89 4.02
297 298 3.830755 GGTGTTCTCTACTAGGTTGTCCA 59.169 47.826 0.00 0.00 35.89 4.02
298 299 3.195182 GGGTGTTCTCTACTAGGTTGTCC 59.805 52.174 0.00 0.00 0.00 4.02
299 300 3.195182 GGGGTGTTCTCTACTAGGTTGTC 59.805 52.174 0.00 0.00 0.00 3.18
300 301 3.171528 GGGGTGTTCTCTACTAGGTTGT 58.828 50.000 0.00 0.00 0.00 3.32
301 302 3.442076 AGGGGTGTTCTCTACTAGGTTG 58.558 50.000 0.00 0.00 0.00 3.77
302 303 3.337301 AGAGGGGTGTTCTCTACTAGGTT 59.663 47.826 0.00 0.00 39.57 3.50
303 304 2.927685 AGAGGGGTGTTCTCTACTAGGT 59.072 50.000 0.00 0.00 39.57 3.08
304 305 3.673543 AGAGGGGTGTTCTCTACTAGG 57.326 52.381 0.00 0.00 39.57 3.02
305 306 4.601084 TGAAGAGGGGTGTTCTCTACTAG 58.399 47.826 0.00 0.00 40.37 2.57
306 307 4.601084 CTGAAGAGGGGTGTTCTCTACTA 58.399 47.826 0.00 0.00 40.37 1.82
307 308 3.436243 CTGAAGAGGGGTGTTCTCTACT 58.564 50.000 0.00 0.00 40.37 2.57
308 309 2.093921 GCTGAAGAGGGGTGTTCTCTAC 60.094 54.545 0.00 0.00 40.37 2.59
309 310 2.180276 GCTGAAGAGGGGTGTTCTCTA 58.820 52.381 0.00 0.00 40.37 2.43
310 311 0.980423 GCTGAAGAGGGGTGTTCTCT 59.020 55.000 0.00 0.00 42.81 3.10
311 312 0.687354 TGCTGAAGAGGGGTGTTCTC 59.313 55.000 0.00 0.00 0.00 2.87
312 313 1.366319 ATGCTGAAGAGGGGTGTTCT 58.634 50.000 0.00 0.00 0.00 3.01
313 314 3.010420 GTTATGCTGAAGAGGGGTGTTC 58.990 50.000 0.00 0.00 0.00 3.18
314 315 2.290960 GGTTATGCTGAAGAGGGGTGTT 60.291 50.000 0.00 0.00 0.00 3.32
315 316 1.282157 GGTTATGCTGAAGAGGGGTGT 59.718 52.381 0.00 0.00 0.00 4.16
316 317 1.561542 AGGTTATGCTGAAGAGGGGTG 59.438 52.381 0.00 0.00 0.00 4.61
317 318 1.972588 AGGTTATGCTGAAGAGGGGT 58.027 50.000 0.00 0.00 0.00 4.95
318 319 2.771943 TGTAGGTTATGCTGAAGAGGGG 59.228 50.000 0.00 0.00 0.00 4.79
319 320 3.452627 AGTGTAGGTTATGCTGAAGAGGG 59.547 47.826 0.00 0.00 0.00 4.30
320 321 4.404073 AGAGTGTAGGTTATGCTGAAGAGG 59.596 45.833 0.00 0.00 0.00 3.69
321 322 5.590530 AGAGTGTAGGTTATGCTGAAGAG 57.409 43.478 0.00 0.00 0.00 2.85
322 323 5.949952 TGTAGAGTGTAGGTTATGCTGAAGA 59.050 40.000 0.00 0.00 0.00 2.87
323 324 6.037098 GTGTAGAGTGTAGGTTATGCTGAAG 58.963 44.000 0.00 0.00 0.00 3.02
324 325 5.105473 GGTGTAGAGTGTAGGTTATGCTGAA 60.105 44.000 0.00 0.00 0.00 3.02
325 326 4.401519 GGTGTAGAGTGTAGGTTATGCTGA 59.598 45.833 0.00 0.00 0.00 4.26
326 327 4.402793 AGGTGTAGAGTGTAGGTTATGCTG 59.597 45.833 0.00 0.00 0.00 4.41
327 328 4.402793 CAGGTGTAGAGTGTAGGTTATGCT 59.597 45.833 0.00 0.00 0.00 3.79
328 329 4.159879 ACAGGTGTAGAGTGTAGGTTATGC 59.840 45.833 0.00 0.00 0.00 3.14
329 330 5.185249 ACACAGGTGTAGAGTGTAGGTTATG 59.815 44.000 2.68 0.00 44.02 1.90
330 331 5.331069 ACACAGGTGTAGAGTGTAGGTTAT 58.669 41.667 2.68 0.00 44.02 1.89
331 332 4.733165 ACACAGGTGTAGAGTGTAGGTTA 58.267 43.478 2.68 0.00 44.02 2.85
332 333 3.573695 ACACAGGTGTAGAGTGTAGGTT 58.426 45.455 2.68 0.00 44.02 3.50
333 334 3.240310 ACACAGGTGTAGAGTGTAGGT 57.760 47.619 2.68 0.00 44.02 3.08
334 335 4.038763 TCAAACACAGGTGTAGAGTGTAGG 59.961 45.833 5.36 0.00 44.99 3.18
335 336 5.009710 TCTCAAACACAGGTGTAGAGTGTAG 59.990 44.000 22.97 9.83 44.99 2.74
336 337 4.891168 TCTCAAACACAGGTGTAGAGTGTA 59.109 41.667 22.97 10.44 44.99 2.90
338 339 4.322080 TCTCAAACACAGGTGTAGAGTG 57.678 45.455 22.97 13.20 44.13 3.51
339 340 5.552870 AATCTCAAACACAGGTGTAGAGT 57.447 39.130 22.97 13.22 44.13 3.24
340 341 6.260936 ACAAAATCTCAAACACAGGTGTAGAG 59.739 38.462 20.23 20.23 44.13 2.43
341 342 6.119536 ACAAAATCTCAAACACAGGTGTAGA 58.880 36.000 5.36 5.80 44.13 2.59
342 343 6.377327 ACAAAATCTCAAACACAGGTGTAG 57.623 37.500 5.36 0.13 44.13 2.74
343 344 6.767524 AACAAAATCTCAAACACAGGTGTA 57.232 33.333 5.36 0.00 44.13 2.90
344 345 7.841500 GAGAAACAAAATCTCAAACACAGGTGT 60.842 37.037 0.00 0.00 43.01 4.16
345 346 6.332630 AGAAACAAAATCTCAAACACAGGTG 58.667 36.000 0.00 0.00 0.00 4.00
346 347 6.530019 AGAAACAAAATCTCAAACACAGGT 57.470 33.333 0.00 0.00 0.00 4.00
356 357 7.219484 TCCCAATCTTGAGAAACAAAATCTC 57.781 36.000 0.00 0.00 42.94 2.75
357 358 7.673082 AGATCCCAATCTTGAGAAACAAAATCT 59.327 33.333 0.00 0.00 39.27 2.40
358 359 7.834803 AGATCCCAATCTTGAGAAACAAAATC 58.165 34.615 0.00 0.00 39.27 2.17
359 360 7.787623 AGATCCCAATCTTGAGAAACAAAAT 57.212 32.000 0.00 0.00 39.27 1.82
372 373 5.361857 CCTATGCAACAAAAGATCCCAATCT 59.638 40.000 0.00 0.00 44.37 2.40
373 374 5.127682 ACCTATGCAACAAAAGATCCCAATC 59.872 40.000 0.00 0.00 0.00 2.67
374 375 5.025453 ACCTATGCAACAAAAGATCCCAAT 58.975 37.500 0.00 0.00 0.00 3.16
375 376 4.415596 ACCTATGCAACAAAAGATCCCAA 58.584 39.130 0.00 0.00 0.00 4.12
376 377 4.046286 ACCTATGCAACAAAAGATCCCA 57.954 40.909 0.00 0.00 0.00 4.37
377 378 4.462483 TCAACCTATGCAACAAAAGATCCC 59.538 41.667 0.00 0.00 0.00 3.85
378 379 5.183904 AGTCAACCTATGCAACAAAAGATCC 59.816 40.000 0.00 0.00 0.00 3.36
379 380 6.259550 AGTCAACCTATGCAACAAAAGATC 57.740 37.500 0.00 0.00 0.00 2.75
380 381 6.655078 AAGTCAACCTATGCAACAAAAGAT 57.345 33.333 0.00 0.00 0.00 2.40
381 382 6.463995 AAAGTCAACCTATGCAACAAAAGA 57.536 33.333 0.00 0.00 0.00 2.52
382 383 6.756074 TCAAAAGTCAACCTATGCAACAAAAG 59.244 34.615 0.00 0.00 0.00 2.27
383 384 6.634805 TCAAAAGTCAACCTATGCAACAAAA 58.365 32.000 0.00 0.00 0.00 2.44
384 385 6.214191 TCAAAAGTCAACCTATGCAACAAA 57.786 33.333 0.00 0.00 0.00 2.83
385 386 5.843673 TCAAAAGTCAACCTATGCAACAA 57.156 34.783 0.00 0.00 0.00 2.83
386 387 5.771469 CATCAAAAGTCAACCTATGCAACA 58.229 37.500 0.00 0.00 0.00 3.33
387 388 4.622740 GCATCAAAAGTCAACCTATGCAAC 59.377 41.667 0.00 0.00 38.44 4.17
388 389 4.280425 TGCATCAAAAGTCAACCTATGCAA 59.720 37.500 0.00 0.00 43.61 4.08
389 390 3.825585 TGCATCAAAAGTCAACCTATGCA 59.174 39.130 0.00 0.00 44.16 3.96
390 391 4.439305 TGCATCAAAAGTCAACCTATGC 57.561 40.909 0.00 0.00 38.90 3.14
391 392 6.017400 ACTTGCATCAAAAGTCAACCTATG 57.983 37.500 0.00 0.00 32.36 2.23
392 393 6.491403 AGAACTTGCATCAAAAGTCAACCTAT 59.509 34.615 0.00 0.00 36.87 2.57
393 394 5.827797 AGAACTTGCATCAAAAGTCAACCTA 59.172 36.000 0.00 0.00 36.87 3.08
394 395 4.646492 AGAACTTGCATCAAAAGTCAACCT 59.354 37.500 0.00 0.00 36.87 3.50
395 396 4.936891 AGAACTTGCATCAAAAGTCAACC 58.063 39.130 0.00 0.00 36.87 3.77
396 397 8.579682 AATAAGAACTTGCATCAAAAGTCAAC 57.420 30.769 0.00 0.00 36.87 3.18
397 398 9.598517 AAAATAAGAACTTGCATCAAAAGTCAA 57.401 25.926 0.00 0.00 36.87 3.18
398 399 9.598517 AAAAATAAGAACTTGCATCAAAAGTCA 57.401 25.926 0.00 0.00 36.87 3.41
424 425 7.119262 CCTCGAGCTACCTTTTATCTTCAAAAA 59.881 37.037 6.99 0.00 0.00 1.94
425 426 6.594159 CCTCGAGCTACCTTTTATCTTCAAAA 59.406 38.462 6.99 0.00 0.00 2.44
426 427 6.106673 CCTCGAGCTACCTTTTATCTTCAAA 58.893 40.000 6.99 0.00 0.00 2.69
427 428 5.661458 CCTCGAGCTACCTTTTATCTTCAA 58.339 41.667 6.99 0.00 0.00 2.69
428 429 4.441634 GCCTCGAGCTACCTTTTATCTTCA 60.442 45.833 6.99 0.00 38.99 3.02
429 430 4.052608 GCCTCGAGCTACCTTTTATCTTC 58.947 47.826 6.99 0.00 38.99 2.87
430 431 3.181464 GGCCTCGAGCTACCTTTTATCTT 60.181 47.826 6.99 0.00 43.05 2.40
431 432 2.365941 GGCCTCGAGCTACCTTTTATCT 59.634 50.000 6.99 0.00 43.05 1.98
432 433 2.365941 AGGCCTCGAGCTACCTTTTATC 59.634 50.000 6.99 0.00 43.05 1.75
433 434 2.399580 AGGCCTCGAGCTACCTTTTAT 58.600 47.619 6.99 0.00 43.05 1.40
434 435 1.861982 AGGCCTCGAGCTACCTTTTA 58.138 50.000 6.99 0.00 43.05 1.52
435 436 1.481363 GTAGGCCTCGAGCTACCTTTT 59.519 52.381 20.65 4.61 43.05 2.27
436 437 1.112950 GTAGGCCTCGAGCTACCTTT 58.887 55.000 20.65 5.19 43.05 3.11
437 438 0.756070 GGTAGGCCTCGAGCTACCTT 60.756 60.000 28.40 14.03 39.87 3.50
438 439 1.152715 GGTAGGCCTCGAGCTACCT 60.153 63.158 28.40 24.37 39.87 3.08
439 440 0.756070 AAGGTAGGCCTCGAGCTACC 60.756 60.000 28.45 28.45 46.33 3.18
440 441 1.978454 TAAGGTAGGCCTCGAGCTAC 58.022 55.000 9.68 17.26 46.33 3.58
441 442 2.973983 ATAAGGTAGGCCTCGAGCTA 57.026 50.000 9.68 0.86 46.33 3.32
442 443 2.973983 TATAAGGTAGGCCTCGAGCT 57.026 50.000 9.68 4.54 46.33 4.09
443 444 4.021368 TGAAATATAAGGTAGGCCTCGAGC 60.021 45.833 9.68 1.37 46.33 5.03
444 445 5.723672 TGAAATATAAGGTAGGCCTCGAG 57.276 43.478 9.68 5.13 46.33 4.04
445 446 6.488769 TTTGAAATATAAGGTAGGCCTCGA 57.511 37.500 9.68 0.00 46.33 4.04
446 447 5.179555 GCTTTGAAATATAAGGTAGGCCTCG 59.820 44.000 9.68 0.00 46.33 4.63
447 448 6.062095 TGCTTTGAAATATAAGGTAGGCCTC 58.938 40.000 9.68 0.00 46.33 4.70
449 450 5.241728 CCTGCTTTGAAATATAAGGTAGGCC 59.758 44.000 0.00 0.00 32.22 5.19
450 451 6.319141 CCTGCTTTGAAATATAAGGTAGGC 57.681 41.667 0.00 0.00 32.22 3.93
451 452 5.049405 CGCCTGCTTTGAAATATAAGGTAGG 60.049 44.000 0.00 0.00 39.09 3.18
452 453 5.560953 GCGCCTGCTTTGAAATATAAGGTAG 60.561 44.000 0.00 0.00 38.39 3.18
453 454 4.274950 GCGCCTGCTTTGAAATATAAGGTA 59.725 41.667 0.00 0.00 38.39 3.08
454 455 3.066760 GCGCCTGCTTTGAAATATAAGGT 59.933 43.478 0.00 0.00 38.39 3.50
455 456 3.632189 GCGCCTGCTTTGAAATATAAGG 58.368 45.455 0.00 0.00 38.39 2.69
456 457 3.002246 TCGCGCCTGCTTTGAAATATAAG 59.998 43.478 0.00 0.00 39.65 1.73
457 458 2.939756 TCGCGCCTGCTTTGAAATATAA 59.060 40.909 0.00 0.00 39.65 0.98
458 459 2.543848 CTCGCGCCTGCTTTGAAATATA 59.456 45.455 0.00 0.00 39.65 0.86
459 460 1.331756 CTCGCGCCTGCTTTGAAATAT 59.668 47.619 0.00 0.00 39.65 1.28
460 461 0.726827 CTCGCGCCTGCTTTGAAATA 59.273 50.000 0.00 0.00 39.65 1.40
461 462 1.503542 CTCGCGCCTGCTTTGAAAT 59.496 52.632 0.00 0.00 39.65 2.17
462 463 2.945984 CTCGCGCCTGCTTTGAAA 59.054 55.556 0.00 0.00 39.65 2.69
463 464 3.726517 GCTCGCGCCTGCTTTGAA 61.727 61.111 0.00 0.00 39.65 2.69
473 474 4.233635 CTTGCATCAGGCTCGCGC 62.234 66.667 0.00 0.00 45.15 6.86
474 475 2.301902 GAACTTGCATCAGGCTCGCG 62.302 60.000 0.00 0.00 45.15 5.87
475 476 1.023513 AGAACTTGCATCAGGCTCGC 61.024 55.000 0.00 0.00 45.15 5.03
476 477 1.446907 AAGAACTTGCATCAGGCTCG 58.553 50.000 0.00 0.00 45.15 5.03
477 478 4.397417 ACAATAAGAACTTGCATCAGGCTC 59.603 41.667 0.00 0.00 45.15 4.70
478 479 4.338879 ACAATAAGAACTTGCATCAGGCT 58.661 39.130 0.00 0.00 45.15 4.58
479 480 4.708726 ACAATAAGAACTTGCATCAGGC 57.291 40.909 0.00 0.00 45.13 4.85
480 481 8.461222 TGATAAACAATAAGAACTTGCATCAGG 58.539 33.333 0.00 0.00 0.00 3.86
481 482 9.282247 GTGATAAACAATAAGAACTTGCATCAG 57.718 33.333 0.00 0.00 0.00 2.90
623 624 3.311048 TCGCTTAACATGATGCGCAAATA 59.689 39.130 17.11 3.70 46.73 1.40
624 625 2.097304 TCGCTTAACATGATGCGCAAAT 59.903 40.909 17.11 8.93 46.73 2.32
626 627 1.082690 TCGCTTAACATGATGCGCAA 58.917 45.000 17.11 0.00 46.73 4.85
627 628 1.082690 TTCGCTTAACATGATGCGCA 58.917 45.000 14.96 14.96 46.73 6.09
628 629 2.172593 TTTCGCTTAACATGATGCGC 57.827 45.000 0.00 0.00 46.73 6.09
630 631 6.966632 TCTAACATTTTCGCTTAACATGATGC 59.033 34.615 0.00 0.00 0.00 3.91
631 632 9.507280 AATCTAACATTTTCGCTTAACATGATG 57.493 29.630 0.00 0.00 0.00 3.07
632 633 9.507280 CAATCTAACATTTTCGCTTAACATGAT 57.493 29.630 0.00 0.00 0.00 2.45
642 643 7.892731 GCAACAATAACAATCTAACATTTTCGC 59.107 33.333 0.00 0.00 0.00 4.70
643 644 8.910666 TGCAACAATAACAATCTAACATTTTCG 58.089 29.630 0.00 0.00 0.00 3.46
727 782 3.603770 GCGCACAAGCTATACACAAAAAG 59.396 43.478 0.30 0.00 39.10 2.27
728 783 3.560503 GCGCACAAGCTATACACAAAAA 58.439 40.909 0.30 0.00 39.10 1.94
737 792 4.473520 AGGCCGCGCACAAGCTAT 62.474 61.111 8.75 0.00 39.10 2.97
762 817 1.602668 GCTCCTGCAAAATTCAACGCA 60.603 47.619 0.00 0.00 39.41 5.24
764 819 1.701704 GGCTCCTGCAAAATTCAACG 58.298 50.000 0.00 0.00 41.91 4.10
870 934 3.786048 GCAGTATTTGTAGCGATGTTTGC 59.214 43.478 0.00 0.00 0.00 3.68
919 983 1.893801 ACTTGAGTAGACTTCGGTGGG 59.106 52.381 0.00 0.00 0.00 4.61
982 1046 4.580868 TCCATGGAAATTTGCTACGTACA 58.419 39.130 13.46 0.00 0.00 2.90
1173 1237 3.782443 GGTGTAGGGGTGGGAGCG 61.782 72.222 0.00 0.00 0.00 5.03
1265 1334 2.649034 CAGCAGTTGCAGGCCTTG 59.351 61.111 0.00 0.00 45.16 3.61
1384 1456 1.686428 CCTCTCCTTCTGATCACCCGA 60.686 57.143 0.00 0.00 0.00 5.14
1389 1461 2.461695 GTCACCCTCTCCTTCTGATCA 58.538 52.381 0.00 0.00 0.00 2.92
1590 1663 1.448717 GACGAAAGAGGGCAGAGGC 60.449 63.158 0.00 0.00 40.13 4.70
1606 1679 4.279420 ACAGAAATTTTCCTTGCTCTGGAC 59.721 41.667 5.52 0.00 35.65 4.02
1614 1687 7.479980 TGTGACACTAACAGAAATTTTCCTTG 58.520 34.615 7.20 1.72 0.00 3.61
1685 1758 5.229423 GCAGATCTTACAGGAGCAATAGAG 58.771 45.833 0.00 0.00 0.00 2.43
1693 1766 2.969628 AACGGCAGATCTTACAGGAG 57.030 50.000 0.00 0.00 0.00 3.69
1702 1775 3.972502 GTGTTTGTACAAAACGGCAGATC 59.027 43.478 22.14 7.60 35.69 2.75
1707 1780 5.275494 AGTATTGTGTTTGTACAAAACGGC 58.725 37.500 22.14 10.69 43.13 5.68
1732 1808 4.617959 CAATGCATCAGGGAAAATGCTAG 58.382 43.478 0.00 0.00 46.64 3.42
1733 1809 3.181473 GCAATGCATCAGGGAAAATGCTA 60.181 43.478 0.00 0.00 46.64 3.49
1734 1810 2.419574 GCAATGCATCAGGGAAAATGCT 60.420 45.455 0.00 0.00 46.64 3.79
1735 1811 1.937899 GCAATGCATCAGGGAAAATGC 59.062 47.619 0.00 0.00 46.68 3.56
1823 1899 5.550290 TGCAATTATGTGACTCAACTCTCA 58.450 37.500 0.00 0.00 0.00 3.27
1870 1947 2.421775 CTGATAGCTGACGACAGTGACT 59.578 50.000 16.02 7.60 45.04 3.41
1876 1953 2.820197 AGTGAACTGATAGCTGACGACA 59.180 45.455 0.00 0.00 0.00 4.35
1880 1957 6.800543 TCTCATAAGTGAACTGATAGCTGAC 58.199 40.000 0.00 0.00 33.05 3.51
1943 2020 3.321968 ACAAATCTGGGAACAAGGAAAGC 59.678 43.478 0.00 0.00 42.06 3.51
1955 2032 5.183140 AGGACATCGTTTTTACAAATCTGGG 59.817 40.000 0.00 0.00 0.00 4.45
1971 2048 2.356382 GACACTCTCACCTAGGACATCG 59.644 54.545 17.98 3.18 0.00 3.84
2153 2230 1.617850 TGGCCCTACATTTTGCACAAG 59.382 47.619 0.00 0.00 0.00 3.16
2212 2292 6.612456 TGCAATCCCTCCATTTCTAAATTGAT 59.388 34.615 0.00 0.00 0.00 2.57
2215 2295 7.441903 AATGCAATCCCTCCATTTCTAAATT 57.558 32.000 0.00 0.00 0.00 1.82
2259 2340 7.924412 TGGAGTATTTCATAAGTTATCACGGAC 59.076 37.037 0.00 0.00 0.00 4.79
2326 2411 1.089920 CCAGTGCTACCTTGTCATGC 58.910 55.000 0.00 0.00 0.00 4.06
2338 2423 3.244616 AGCAGACCAACCAGTGCT 58.755 55.556 0.00 0.00 41.47 4.40
2355 2440 0.676736 TACATGCGTCACCACTCACA 59.323 50.000 0.00 0.00 0.00 3.58
2405 2490 0.981183 TGACTGCCGTGGTTAGGAAT 59.019 50.000 0.00 0.00 0.00 3.01
2726 2866 8.183536 TGTGCTAAAGCTGTGACAATTAATATG 58.816 33.333 3.26 0.00 42.66 1.78
2739 2879 6.522054 TCTACTAAAGTTGTGCTAAAGCTGT 58.478 36.000 3.26 0.00 42.66 4.40
2742 2882 9.678941 AAAAATCTACTAAAGTTGTGCTAAAGC 57.321 29.630 0.00 0.00 42.50 3.51
2758 2898 8.348507 CAAAGCTCTTCAACTCAAAAATCTACT 58.651 33.333 0.00 0.00 0.00 2.57
2792 2932 6.451064 ACACGTATGATCATGTCTCACTAA 57.549 37.500 18.72 0.00 0.00 2.24
2823 2963 0.179009 ATGATCATGTCCCCCGCAAG 60.179 55.000 7.59 0.00 0.00 4.01
2824 2964 1.135960 TATGATCATGTCCCCCGCAA 58.864 50.000 18.72 0.00 0.00 4.85
2908 3048 5.069119 CCTGAGTGTATTAGCAGGTACATCA 59.931 44.000 0.00 0.00 42.26 3.07
2909 3049 5.533482 CCTGAGTGTATTAGCAGGTACATC 58.467 45.833 0.00 0.00 42.26 3.06
2910 3050 5.537300 CCTGAGTGTATTAGCAGGTACAT 57.463 43.478 0.00 0.00 42.26 2.29
2949 3095 0.108281 GTGGTTTCTCCTCTACCGGC 60.108 60.000 0.00 0.00 34.62 6.13
3025 3171 2.029838 ACATCTGGTTTCGGAGATGC 57.970 50.000 0.00 0.00 46.50 3.91
3085 3231 1.080434 GCTTCTCGCTCGTCTTGGT 60.080 57.895 0.00 0.00 35.14 3.67
3246 3392 2.293399 GACGCATCCAAACAGAGGTTTT 59.707 45.455 0.00 0.00 44.63 2.43
3251 3397 1.081892 CCTGACGCATCCAAACAGAG 58.918 55.000 0.00 0.00 0.00 3.35
3324 3473 0.530744 TGACTCCCTACACGTCATGC 59.469 55.000 0.00 0.00 33.15 4.06
3502 3776 7.012232 AGTGCAATTTCACCGAAATTTTGAAAT 59.988 29.630 17.67 17.67 46.07 2.17
3544 3819 8.307483 CCTGGTCAGTTCGTTCTCATATTATAT 58.693 37.037 0.00 0.00 0.00 0.86
3545 3820 7.287005 ACCTGGTCAGTTCGTTCTCATATTATA 59.713 37.037 0.00 0.00 0.00 0.98
3687 3962 4.389576 CGTTGCTGGTTGCCGAGC 62.390 66.667 0.00 0.00 42.00 5.03
3754 4029 0.170561 GTGTAGAGCGAGAAAGGCGA 59.829 55.000 0.00 0.00 35.00 5.54
3765 4040 4.509737 GACGGGGCGGTGTAGAGC 62.510 72.222 0.00 0.00 0.00 4.09
3780 4055 1.154263 CTTCCTGGACGACGACGAC 60.154 63.158 15.32 7.84 42.66 4.34
3863 4138 3.314331 CCGTCTCCAGCCAGGTGT 61.314 66.667 0.00 0.00 39.02 4.16
3969 4244 0.034059 CGTTGACCCTCTTGAGCTGT 59.966 55.000 0.00 0.00 0.00 4.40
4128 4403 3.004419 GGCACAGCATATACACTCGTCTA 59.996 47.826 0.00 0.00 0.00 2.59
4131 4406 1.536072 CGGCACAGCATATACACTCGT 60.536 52.381 0.00 0.00 0.00 4.18
4132 4407 1.131771 CGGCACAGCATATACACTCG 58.868 55.000 0.00 0.00 0.00 4.18
4133 4408 1.068588 TCCGGCACAGCATATACACTC 59.931 52.381 0.00 0.00 0.00 3.51
4134 4409 1.069204 CTCCGGCACAGCATATACACT 59.931 52.381 0.00 0.00 0.00 3.55
4135 4410 1.502231 CTCCGGCACAGCATATACAC 58.498 55.000 0.00 0.00 0.00 2.90
4136 4411 0.249868 GCTCCGGCACAGCATATACA 60.250 55.000 8.67 0.00 36.82 2.29
4137 4412 0.249868 TGCTCCGGCACAGCATATAC 60.250 55.000 12.02 0.00 42.09 1.47
4138 4413 2.132300 TGCTCCGGCACAGCATATA 58.868 52.632 12.02 0.00 42.09 0.86
4189 4465 5.233225 GGCGGTCTTACTTAATACCATACC 58.767 45.833 4.86 0.00 33.46 2.73
4209 4485 3.982213 GCCTAAAAACGTTAGGGCG 57.018 52.632 15.65 0.00 41.38 6.13
4239 4515 3.536158 ACAAAAATGTGACACCGATCG 57.464 42.857 8.51 8.51 0.00 3.69
4248 4524 3.316588 TGCCTCGCTTTACAAAAATGTGA 59.683 39.130 0.00 0.00 0.00 3.58
4251 4527 2.656422 CGTGCCTCGCTTTACAAAAATG 59.344 45.455 0.00 0.00 0.00 2.32
4265 4541 1.394917 CAATCTGCTTGTACGTGCCTC 59.605 52.381 0.00 0.00 0.00 4.70
4308 4584 4.511527 CAGATCTTCTATGTTGTGTGCCT 58.488 43.478 0.00 0.00 0.00 4.75
4343 4619 6.127281 ACTGGTTTATATGTATGTGTGTCCGA 60.127 38.462 0.00 0.00 0.00 4.55
4345 4621 8.951787 TTACTGGTTTATATGTATGTGTGTCC 57.048 34.615 0.00 0.00 0.00 4.02
4403 4679 1.126846 GACGCAAAGACACAATCCGAG 59.873 52.381 0.00 0.00 0.00 4.63
4408 4684 3.003689 CCTTTCTGACGCAAAGACACAAT 59.996 43.478 0.00 0.00 33.34 2.71
4423 4699 2.693069 AGCGAGATGTTGTCCTTTCTG 58.307 47.619 0.00 0.00 0.00 3.02
4437 4713 2.420967 GGGGCCAATAAACTAAGCGAGA 60.421 50.000 4.39 0.00 0.00 4.04
4440 4716 1.676006 CTGGGGCCAATAAACTAAGCG 59.324 52.381 4.39 0.00 0.00 4.68
4495 4771 3.366985 GGTGCCGAACTAAAAATTCTGGG 60.367 47.826 0.00 0.00 0.00 4.45
4501 4777 0.524414 GCCGGTGCCGAACTAAAAAT 59.476 50.000 12.71 0.00 42.83 1.82
4517 4793 2.516930 CCCTATGTTGCCCAGCCG 60.517 66.667 0.00 0.00 0.00 5.52
4543 4819 4.561752 AGGGTCTCTATGATGTTAAGGCT 58.438 43.478 0.00 0.00 0.00 4.58
4548 4824 4.519350 CGCACTAGGGTCTCTATGATGTTA 59.481 45.833 0.00 0.00 0.00 2.41
4557 4833 2.028130 CTCAATCGCACTAGGGTCTCT 58.972 52.381 0.00 0.00 0.00 3.10
4561 4837 1.522569 GCCTCAATCGCACTAGGGT 59.477 57.895 0.00 0.00 0.00 4.34
4869 5270 1.980765 TCCATGGCAAGAGTCAAGAGT 59.019 47.619 6.96 0.00 30.06 3.24
4870 5271 2.775911 TCCATGGCAAGAGTCAAGAG 57.224 50.000 6.96 0.00 30.06 2.85
4871 5272 3.349927 CAATCCATGGCAAGAGTCAAGA 58.650 45.455 6.96 0.00 30.06 3.02
4872 5273 2.426024 CCAATCCATGGCAAGAGTCAAG 59.574 50.000 6.96 0.00 43.80 3.02
4873 5274 2.449464 CCAATCCATGGCAAGAGTCAA 58.551 47.619 6.96 0.00 43.80 3.18
4874 5275 2.133281 CCAATCCATGGCAAGAGTCA 57.867 50.000 6.96 0.00 43.80 3.41
4933 5334 6.659242 GGGACAAGGAATTGATCTTTTGTCTA 59.341 38.462 12.97 0.00 43.80 2.59
4965 5366 9.726232 ATGTAATTTTCATCATCAATCGAAGTG 57.274 29.630 0.00 0.00 0.00 3.16
5015 5416 2.568956 TCATCTAGTATCCATGGCCAGC 59.431 50.000 13.05 0.00 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.