Multiple sequence alignment - TraesCS4D01G076800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G076800 chr4D 100.000 7276 0 0 1 7276 51070826 51078101 0.000000e+00 13437.0
1 TraesCS4D01G076800 chr4D 99.449 363 1 1 2113 2475 48073270 48073631 0.000000e+00 658.0
2 TraesCS4D01G076800 chr4D 91.165 249 16 6 5276 5521 341525508 341525753 4.210000e-87 333.0
3 TraesCS4D01G076800 chr4D 91.393 244 18 3 5276 5518 394302090 394301849 1.510000e-86 331.0
4 TraesCS4D01G076800 chr4D 88.163 245 25 4 5276 5518 500823497 500823255 9.240000e-74 289.0
5 TraesCS4D01G076800 chr4D 91.200 125 11 0 6988 7112 487477546 487477670 3.490000e-38 171.0
6 TraesCS4D01G076800 chr4D 93.333 45 3 0 739 783 51071517 51071561 4.710000e-07 67.6
7 TraesCS4D01G076800 chr4D 93.333 45 3 0 692 736 51071564 51071608 4.710000e-07 67.6
8 TraesCS4D01G076800 chr4D 100.000 28 0 0 7143 7170 301726809 301726836 1.300000e-02 52.8
9 TraesCS4D01G076800 chr4A 93.853 3400 97 37 3388 6758 545604911 545601595 0.000000e+00 5018.0
10 TraesCS4D01G076800 chr4A 93.062 1398 43 15 745 2113 545607152 545605780 0.000000e+00 1995.0
11 TraesCS4D01G076800 chr4A 94.365 905 31 8 2460 3356 545605803 545604911 0.000000e+00 1371.0
12 TraesCS4D01G076800 chr4A 89.266 531 37 12 223 739 545607635 545607111 0.000000e+00 647.0
13 TraesCS4D01G076800 chr4A 91.746 315 23 3 6964 7276 545601100 545600787 1.120000e-117 435.0
14 TraesCS4D01G076800 chr4A 91.518 224 18 1 1 223 691149676 691149899 2.550000e-79 307.0
15 TraesCS4D01G076800 chr4A 91.150 226 17 2 1 225 383547694 383547917 3.300000e-78 303.0
16 TraesCS4D01G076800 chr4A 85.714 168 13 6 6731 6897 545601568 545601411 4.520000e-37 167.0
17 TraesCS4D01G076800 chr4A 82.927 164 26 2 7111 7272 683653961 683654124 5.880000e-31 147.0
18 TraesCS4D01G076800 chr4A 82.192 146 10 9 6809 6952 545601410 545601279 2.150000e-20 111.0
19 TraesCS4D01G076800 chr4A 87.179 78 5 5 1962 2038 146554010 146553937 4.680000e-12 84.2
20 TraesCS4D01G076800 chr4A 84.906 53 8 0 2023 2075 598739596 598739648 4.000000e-03 54.7
21 TraesCS4D01G076800 chr4B 95.531 1365 40 8 5518 6867 75205724 75207082 0.000000e+00 2163.0
22 TraesCS4D01G076800 chr4B 91.002 1467 66 25 706 2113 75201325 75202784 0.000000e+00 1917.0
23 TraesCS4D01G076800 chr4B 94.270 1117 43 10 3778 4889 75204008 75205108 0.000000e+00 1688.0
24 TraesCS4D01G076800 chr4B 94.346 902 40 4 2466 3365 75202769 75203661 0.000000e+00 1373.0
25 TraesCS4D01G076800 chr4B 87.066 518 46 11 222 729 75200812 75201318 3.810000e-157 566.0
26 TraesCS4D01G076800 chr4B 94.051 353 19 2 4924 5275 75205360 75205711 1.070000e-147 534.0
27 TraesCS4D01G076800 chr4B 87.021 339 25 13 6803 7123 75207086 75207423 1.490000e-96 364.0
28 TraesCS4D01G076800 chr4B 92.149 242 15 4 5276 5516 447455226 447455464 9.040000e-89 339.0
29 TraesCS4D01G076800 chr4B 91.518 224 17 2 1 223 233235762 233235984 2.550000e-79 307.0
30 TraesCS4D01G076800 chr4B 95.213 188 8 1 3418 3605 75203658 75203844 5.520000e-76 296.0
31 TraesCS4D01G076800 chr4B 88.755 249 18 8 5276 5521 423361562 423361803 5.520000e-76 296.0
32 TraesCS4D01G076800 chr4B 94.805 154 7 1 3641 3793 75203838 75203991 9.430000e-59 239.0
33 TraesCS4D01G076800 chr4B 97.895 95 1 1 4888 4982 75205267 75205360 5.840000e-36 163.0
34 TraesCS4D01G076800 chr4B 82.171 129 21 2 7114 7240 99006244 99006372 7.720000e-20 110.0
35 TraesCS4D01G076800 chr4B 96.875 32 1 0 756 787 75201328 75201359 4.000000e-03 54.7
36 TraesCS4D01G076800 chr4B 100.000 29 0 0 2047 2075 546251892 546251920 4.000000e-03 54.7
37 TraesCS4D01G076800 chr7D 99.725 363 0 1 2113 2474 465340206 465340568 0.000000e+00 664.0
38 TraesCS4D01G076800 chr7D 99.451 364 1 1 2113 2475 534471367 534471004 0.000000e+00 660.0
39 TraesCS4D01G076800 chr7D 76.543 162 35 3 7114 7273 632408960 632408800 1.300000e-12 86.1
40 TraesCS4D01G076800 chr7D 97.917 48 1 0 6827 6874 333690892 333690939 4.680000e-12 84.2
41 TraesCS4D01G076800 chr5A 100.000 359 0 0 2113 2471 106360654 106360296 0.000000e+00 664.0
42 TraesCS4D01G076800 chr5A 99.451 364 1 1 2113 2475 23608618 23608981 0.000000e+00 660.0
43 TraesCS4D01G076800 chr5A 90.496 242 19 4 5276 5516 493864342 493864104 4.240000e-82 316.0
44 TraesCS4D01G076800 chr5A 91.150 226 19 1 1 225 632012659 632012434 9.170000e-79 305.0
45 TraesCS4D01G076800 chr5A 87.143 70 8 1 1965 2034 37065513 37065581 2.180000e-10 78.7
46 TraesCS4D01G076800 chr5A 86.154 65 7 2 2011 2075 514196740 514196678 1.310000e-07 69.4
47 TraesCS4D01G076800 chr6A 99.451 364 1 1 2113 2475 410901872 410901509 0.000000e+00 660.0
48 TraesCS4D01G076800 chr6A 91.228 228 19 1 1 227 2174860 2175087 7.090000e-80 309.0
49 TraesCS4D01G076800 chr6A 83.030 165 26 2 7110 7272 597181895 597181731 1.640000e-31 148.0
50 TraesCS4D01G076800 chr3A 99.451 364 1 1 2113 2475 91016650 91017013 0.000000e+00 660.0
51 TraesCS4D01G076800 chr3A 92.430 251 15 4 5276 5524 63180774 63180526 8.980000e-94 355.0
52 TraesCS4D01G076800 chr3A 90.763 249 15 5 5272 5518 501225881 501225639 7.040000e-85 326.0
53 TraesCS4D01G076800 chr3A 85.455 165 23 1 7111 7274 423534058 423534222 3.490000e-38 171.0
54 TraesCS4D01G076800 chr1A 99.451 364 1 1 2113 2475 420385262 420384899 0.000000e+00 660.0
55 TraesCS4D01G076800 chr1A 84.242 165 24 2 7110 7272 163750686 163750522 7.560000e-35 159.0
56 TraesCS4D01G076800 chr1A 88.571 105 9 3 1965 2068 262834268 262834166 2.760000e-24 124.0
57 TraesCS4D01G076800 chr1A 82.482 137 22 2 4157 4293 309459713 309459847 1.280000e-22 119.0
58 TraesCS4D01G076800 chr1A 89.130 92 8 2 7114 7204 59821375 59821285 5.970000e-21 113.0
59 TraesCS4D01G076800 chr1A 96.154 52 2 0 6827 6878 564322601 564322652 1.300000e-12 86.1
60 TraesCS4D01G076800 chr1A 76.000 175 33 8 7095 7266 94114369 94114537 1.680000e-11 82.4
61 TraesCS4D01G076800 chr1A 84.091 88 3 2 3339 3416 298603688 298603602 2.820000e-09 75.0
62 TraesCS4D01G076800 chr1A 95.652 46 2 0 6827 6872 397737866 397737911 2.820000e-09 75.0
63 TraesCS4D01G076800 chr6B 98.916 369 2 2 2113 2479 199068754 199069122 0.000000e+00 658.0
64 TraesCS4D01G076800 chr6B 91.736 242 16 4 5276 5516 352091781 352091543 4.210000e-87 333.0
65 TraesCS4D01G076800 chr6B 89.147 129 13 1 6988 7116 290223062 290223189 7.560000e-35 159.0
66 TraesCS4D01G076800 chr6B 87.097 62 6 2 2015 2076 707934160 707934219 1.310000e-07 69.4
67 TraesCS4D01G076800 chr2A 81.897 464 61 12 3877 4333 772678289 772677842 3.210000e-98 370.0
68 TraesCS4D01G076800 chr2A 81.818 165 28 2 7110 7272 365989314 365989150 3.540000e-28 137.0
69 TraesCS4D01G076800 chr2A 85.714 70 5 3 6837 6901 52413389 52413320 1.310000e-07 69.4
70 TraesCS4D01G076800 chr2D 81.760 466 51 19 3877 4333 647811122 647811562 6.940000e-95 359.0
71 TraesCS4D01G076800 chr2D 92.800 125 9 0 6988 7112 489367974 489367850 1.610000e-41 182.0
72 TraesCS4D01G076800 chr2D 90.476 126 11 1 6989 7114 36746043 36745919 1.620000e-36 165.0
73 TraesCS4D01G076800 chr2B 92.946 241 13 4 5276 5515 636775378 636775615 1.500000e-91 348.0
74 TraesCS4D01G076800 chr2B 91.630 227 17 2 1 225 218294759 218294533 5.480000e-81 313.0
75 TraesCS4D01G076800 chr2B 85.795 176 18 2 3592 3762 391142254 391142081 5.800000e-41 180.0
76 TraesCS4D01G076800 chr2B 88.550 131 15 0 6982 7112 154494362 154494492 7.560000e-35 159.0
77 TraesCS4D01G076800 chr2B 89.062 128 14 0 6988 7115 154605889 154605762 7.560000e-35 159.0
78 TraesCS4D01G076800 chr2B 82.105 95 6 3 3330 3413 405757695 405757789 3.640000e-08 71.3
79 TraesCS4D01G076800 chr5D 92.500 240 14 4 5276 5515 494083174 494082939 2.510000e-89 340.0
80 TraesCS4D01G076800 chr5D 89.754 244 18 4 5272 5514 408543647 408543884 9.170000e-79 305.0
81 TraesCS4D01G076800 chr5D 79.310 145 28 2 7111 7253 310559016 310559160 4.640000e-17 100.0
82 TraesCS4D01G076800 chr5D 95.000 60 3 0 7114 7173 284960476 284960535 2.160000e-15 95.3
83 TraesCS4D01G076800 chr5D 87.324 71 8 1 1965 2035 46054795 46054864 6.050000e-11 80.5
84 TraesCS4D01G076800 chr5D 91.379 58 5 0 6827 6884 259545794 259545737 6.050000e-11 80.5
85 TraesCS4D01G076800 chr3B 92.405 237 12 5 5281 5516 519399089 519399320 4.210000e-87 333.0
86 TraesCS4D01G076800 chr3B 91.593 226 17 2 1 225 708943024 708943248 1.970000e-80 311.0
87 TraesCS4D01G076800 chr1B 90.873 252 16 5 5272 5518 433422808 433423057 1.510000e-86 331.0
88 TraesCS4D01G076800 chr1B 90.456 241 20 3 5279 5518 589055901 589055663 1.520000e-81 315.0
89 TraesCS4D01G076800 chr1B 88.710 248 23 5 5272 5518 553450032 553450275 1.530000e-76 298.0
90 TraesCS4D01G076800 chr1B 81.752 137 24 1 4157 4293 341748349 341748214 5.970000e-21 113.0
91 TraesCS4D01G076800 chr1B 87.129 101 10 3 1965 2064 301264264 301264362 2.150000e-20 111.0
92 TraesCS4D01G076800 chr1B 77.576 165 34 3 7111 7273 538210642 538210479 6.010000e-16 97.1
93 TraesCS4D01G076800 chr1B 78.873 142 24 4 7112 7248 644447012 644446872 2.800000e-14 91.6
94 TraesCS4D01G076800 chr1B 87.500 80 7 1 3339 3415 378835242 378835163 1.010000e-13 89.8
95 TraesCS4D01G076800 chr1B 95.652 46 2 0 6827 6872 370729902 370729947 2.820000e-09 75.0
96 TraesCS4D01G076800 chr1D 90.476 252 17 5 5272 5518 320384410 320384659 7.040000e-85 326.0
97 TraesCS4D01G076800 chr1D 88.477 243 23 4 5276 5517 464601406 464601168 9.240000e-74 289.0
98 TraesCS4D01G076800 chr1D 87.500 248 25 4 5271 5517 319918494 319918252 1.550000e-71 281.0
99 TraesCS4D01G076800 chr1D 87.967 241 20 6 5276 5515 411027032 411027264 7.190000e-70 276.0
100 TraesCS4D01G076800 chr1D 87.983 233 22 5 5276 5507 38724458 38724231 3.350000e-68 270.0
101 TraesCS4D01G076800 chr1D 89.313 131 14 0 6982 7112 4974575 4974705 1.620000e-36 165.0
102 TraesCS4D01G076800 chr1D 90.164 122 12 0 6988 7109 381977194 381977073 7.560000e-35 159.0
103 TraesCS4D01G076800 chr1D 83.621 116 17 2 4178 4293 236320900 236320787 2.780000e-19 108.0
104 TraesCS4D01G076800 chr1D 82.609 115 8 9 1965 2076 205489355 205489460 2.800000e-14 91.6
105 TraesCS4D01G076800 chr1D 88.158 76 6 3 7114 7188 26493420 26493347 3.620000e-13 87.9
106 TraesCS4D01G076800 chr1D 76.687 163 33 5 7112 7270 256584957 256585118 1.300000e-12 86.1
107 TraesCS4D01G076800 chr1D 95.833 48 2 0 6827 6874 128528642 128528689 2.180000e-10 78.7
108 TraesCS4D01G076800 chr1D 76.048 167 28 10 7114 7273 134675470 134675309 7.830000e-10 76.8
109 TraesCS4D01G076800 chr1D 82.353 102 5 4 3339 3429 249030320 249030419 7.830000e-10 76.8
110 TraesCS4D01G076800 chr1D 83.529 85 4 1 3339 3413 372835755 372835839 3.640000e-08 71.3
111 TraesCS4D01G076800 chr1D 86.667 60 8 0 7114 7173 262298687 262298628 4.710000e-07 67.6
112 TraesCS4D01G076800 chr1D 100.000 36 0 0 3339 3374 484242378 484242413 4.710000e-07 67.6
113 TraesCS4D01G076800 chr5B 92.070 227 15 2 1 226 320410963 320411187 4.240000e-82 316.0
114 TraesCS4D01G076800 chr5B 83.636 165 26 1 7111 7274 441523982 441524146 3.520000e-33 154.0
115 TraesCS4D01G076800 chr5B 88.060 67 7 1 1969 2035 47117968 47118033 2.180000e-10 78.7
116 TraesCS4D01G076800 chr5B 100.000 36 0 0 3339 3374 699438515 699438480 4.710000e-07 67.6
117 TraesCS4D01G076800 chr6D 89.796 245 20 5 5271 5513 389297202 389297443 7.090000e-80 309.0
118 TraesCS4D01G076800 chr6D 87.554 233 23 6 5282 5512 384552141 384551913 1.560000e-66 265.0
119 TraesCS4D01G076800 chr6D 90.964 166 12 3 5360 5524 443742061 443741898 3.420000e-53 220.0
120 TraesCS4D01G076800 chr6D 84.052 232 27 7 5287 5516 319259008 319259231 1.590000e-51 215.0
121 TraesCS4D01G076800 chr6D 88.889 135 14 1 6982 7115 363386300 363386434 1.620000e-36 165.0
122 TraesCS4D01G076800 chr6D 90.351 114 10 1 7005 7118 113486519 113486407 1.640000e-31 148.0
123 TraesCS4D01G076800 chr6D 95.161 62 3 0 5438 5499 98451556 98451617 1.670000e-16 99.0
124 TraesCS4D01G076800 chr6D 93.750 64 3 1 5435 5497 410309690 410309627 2.160000e-15 95.3
125 TraesCS4D01G076800 chr6D 93.333 60 4 0 5438 5497 341257632 341257573 1.010000e-13 89.8
126 TraesCS4D01G076800 chr6D 90.164 61 6 0 7112 7172 412383277 412383217 6.050000e-11 80.5
127 TraesCS4D01G076800 chr6D 88.710 62 7 0 7112 7173 121188792 121188853 7.830000e-10 76.8
128 TraesCS4D01G076800 chr6D 75.309 162 38 2 7114 7273 445281193 445281032 7.830000e-10 76.8
129 TraesCS4D01G076800 chr6D 84.127 63 10 0 7111 7173 304927328 304927390 2.190000e-05 62.1
130 TraesCS4D01G076800 chr6D 100.000 28 0 0 5489 5516 284219899 284219872 1.300000e-02 52.8
131 TraesCS4D01G076800 chr7B 91.150 226 19 1 1 225 560540300 560540525 9.170000e-79 305.0
132 TraesCS4D01G076800 chr7B 78.344 157 28 6 7114 7266 723208383 723208537 6.010000e-16 97.1
133 TraesCS4D01G076800 chrUn 86.307 241 27 3 5276 5515 38450267 38450032 2.600000e-64 257.0
134 TraesCS4D01G076800 chrUn 87.440 207 22 3 5312 5518 45262189 45261987 1.220000e-57 235.0
135 TraesCS4D01G076800 chrUn 88.281 128 15 0 6988 7115 225563482 225563609 3.520000e-33 154.0
136 TraesCS4D01G076800 chrUn 88.281 128 15 0 6988 7115 237460888 237460761 3.520000e-33 154.0
137 TraesCS4D01G076800 chrUn 88.281 128 15 0 6988 7115 257672604 257672477 3.520000e-33 154.0
138 TraesCS4D01G076800 chrUn 88.281 128 15 0 6988 7115 279682745 279682618 3.520000e-33 154.0
139 TraesCS4D01G076800 chrUn 88.281 128 15 0 6988 7115 294341122 294341249 3.520000e-33 154.0
140 TraesCS4D01G076800 chrUn 91.743 109 9 0 7007 7115 452996001 452996109 1.260000e-32 152.0
141 TraesCS4D01G076800 chrUn 88.571 105 12 0 7005 7109 32291712 32291816 2.130000e-25 128.0
142 TraesCS4D01G076800 chrUn 87.963 108 13 0 7005 7112 413797324 413797431 2.130000e-25 128.0
143 TraesCS4D01G076800 chrUn 91.954 87 7 0 7007 7093 250291817 250291731 9.910000e-24 122.0
144 TraesCS4D01G076800 chrUn 80.263 152 28 2 7124 7273 82580622 82580773 5.970000e-21 113.0
145 TraesCS4D01G076800 chrUn 95.000 60 3 0 5438 5497 19300117 19300058 2.160000e-15 95.3
146 TraesCS4D01G076800 chrUn 95.000 60 3 0 5438 5497 24079442 24079501 2.160000e-15 95.3
147 TraesCS4D01G076800 chrUn 95.000 60 3 0 5438 5497 25070737 25070796 2.160000e-15 95.3
148 TraesCS4D01G076800 chrUn 95.000 60 3 0 5438 5497 25522261 25522202 2.160000e-15 95.3
149 TraesCS4D01G076800 chrUn 95.000 60 3 0 5438 5497 80689509 80689568 2.160000e-15 95.3
150 TraesCS4D01G076800 chrUn 95.000 60 3 0 5438 5497 80763834 80763893 2.160000e-15 95.3
151 TraesCS4D01G076800 chrUn 95.000 60 3 0 5438 5497 96798064 96798005 2.160000e-15 95.3
152 TraesCS4D01G076800 chrUn 96.154 52 2 0 6827 6878 63571047 63571098 1.300000e-12 86.1
153 TraesCS4D01G076800 chrUn 75.449 167 33 8 7112 7273 82257546 82257383 2.820000e-09 75.0
154 TraesCS4D01G076800 chrUn 75.449 167 33 8 7112 7273 82275799 82275962 2.820000e-09 75.0
155 TraesCS4D01G076800 chrUn 85.246 61 6 3 2017 2076 328115531 328115473 7.880000e-05 60.2
156 TraesCS4D01G076800 chr3D 81.928 166 26 4 7110 7272 519304418 519304254 3.540000e-28 137.0
157 TraesCS4D01G076800 chr3D 95.833 48 2 0 6827 6874 431834083 431834036 2.180000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G076800 chr4D 51070826 51078101 7275 False 13437.0 13437 100.000000 1 7276 1 chr4D.!!$F2 7275
1 TraesCS4D01G076800 chr4A 545600787 545607635 6848 True 1392.0 5018 90.028286 223 7276 7 chr4A.!!$R2 7053
2 TraesCS4D01G076800 chr4B 75200812 75207423 6611 False 850.7 2163 93.461364 222 7123 11 chr4B.!!$F6 6901

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
174 175 0.106469 TGCTCTCTCCTCTACCGCAT 60.106 55.000 0.00 0.0 0.00 4.73 F
447 451 0.241749 TCGTGTTTCCGACGCATAGT 59.758 50.000 0.00 0.0 38.71 2.12 F
2188 2314 0.036388 TCGTCTGAGATGGTTTGGGC 60.036 55.000 1.24 0.0 0.00 5.36 F
2251 2377 0.026803 GCTAAAGCGTGCGGAGAATG 59.973 55.000 0.00 0.0 0.00 2.67 F
2383 2509 0.179037 TGCTATCCATGTGCCAGAGC 60.179 55.000 0.00 0.0 40.48 4.09 F
4243 4415 0.178897 TCCAAACCGGGAAGGGTCTA 60.179 55.000 6.32 0.0 40.76 2.59 F
4299 4471 0.034863 TGGGGATTGAACTTACCGCC 60.035 55.000 0.00 0.0 35.06 6.13 F
4421 4594 1.197721 GTGTCTTCAAAGCACATCGGG 59.802 52.381 10.44 0.0 35.00 5.14 F
5448 5859 0.947180 GCCAACCTCGCGTGAACTAA 60.947 55.000 10.21 0.0 0.00 2.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2169 2295 0.036388 GCCCAAACCATCTCAGACGA 60.036 55.000 0.00 0.0 0.00 4.20 R
2232 2358 0.026803 CATTCTCCGCACGCTTTAGC 59.973 55.000 0.00 0.0 37.78 3.09 R
3398 3531 1.307097 CCTACTACTCCCTCCGTTCG 58.693 60.000 0.00 0.0 0.00 3.95 R
3957 4124 1.372128 GCGGGCTTGCTTGAGTTTG 60.372 57.895 0.00 0.0 0.00 2.93 R
4299 4471 0.178935 AATTGGAGTTGGTGGTGGGG 60.179 55.000 0.00 0.0 0.00 4.96 R
5276 5668 0.105408 CGTTCGGGATTTATCGGGGT 59.895 55.000 0.00 0.0 0.00 4.95 R
5349 5760 0.107831 ACTAAAGTTGCCACCTCGCA 59.892 50.000 0.00 0.0 36.85 5.10 R
5461 5872 0.109319 GCATGGCAATCCGAACGTTT 60.109 50.000 0.46 0.0 34.14 3.60 R
7132 7877 0.527565 CGGGTCGGGGTATTATACGG 59.472 60.000 0.00 0.0 0.00 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 8.830201 TGACAAAATCAAATGTCTAAAATGGG 57.170 30.769 7.35 0.00 44.86 4.00
36 37 8.428063 TGACAAAATCAAATGTCTAAAATGGGT 58.572 29.630 7.35 0.00 44.86 4.51
37 38 8.831715 ACAAAATCAAATGTCTAAAATGGGTC 57.168 30.769 0.00 0.00 0.00 4.46
38 39 8.428063 ACAAAATCAAATGTCTAAAATGGGTCA 58.572 29.630 0.00 0.00 0.00 4.02
39 40 9.439500 CAAAATCAAATGTCTAAAATGGGTCAT 57.561 29.630 0.00 0.00 0.00 3.06
40 41 9.657419 AAAATCAAATGTCTAAAATGGGTCATC 57.343 29.630 0.00 0.00 0.00 2.92
41 42 8.599624 AATCAAATGTCTAAAATGGGTCATCT 57.400 30.769 0.00 0.00 0.00 2.90
42 43 7.630242 TCAAATGTCTAAAATGGGTCATCTC 57.370 36.000 0.00 0.00 0.00 2.75
43 44 7.405292 TCAAATGTCTAAAATGGGTCATCTCT 58.595 34.615 0.00 0.00 0.00 3.10
44 45 7.890127 TCAAATGTCTAAAATGGGTCATCTCTT 59.110 33.333 0.00 0.00 0.00 2.85
45 46 9.177608 CAAATGTCTAAAATGGGTCATCTCTTA 57.822 33.333 0.00 0.00 0.00 2.10
46 47 8.970859 AATGTCTAAAATGGGTCATCTCTTAG 57.029 34.615 0.00 0.00 0.00 2.18
47 48 6.889198 TGTCTAAAATGGGTCATCTCTTAGG 58.111 40.000 0.00 0.00 0.00 2.69
48 49 6.443849 TGTCTAAAATGGGTCATCTCTTAGGT 59.556 38.462 0.00 0.00 0.00 3.08
49 50 7.037586 TGTCTAAAATGGGTCATCTCTTAGGTT 60.038 37.037 0.00 0.00 0.00 3.50
50 51 7.829706 GTCTAAAATGGGTCATCTCTTAGGTTT 59.170 37.037 0.00 0.00 0.00 3.27
51 52 9.053472 TCTAAAATGGGTCATCTCTTAGGTTTA 57.947 33.333 0.00 0.00 0.00 2.01
52 53 9.853177 CTAAAATGGGTCATCTCTTAGGTTTAT 57.147 33.333 0.00 0.00 0.00 1.40
53 54 8.753497 AAAATGGGTCATCTCTTAGGTTTATC 57.247 34.615 0.00 0.00 0.00 1.75
54 55 7.698163 AATGGGTCATCTCTTAGGTTTATCT 57.302 36.000 0.00 0.00 0.00 1.98
55 56 7.698163 ATGGGTCATCTCTTAGGTTTATCTT 57.302 36.000 0.00 0.00 0.00 2.40
56 57 7.125792 TGGGTCATCTCTTAGGTTTATCTTC 57.874 40.000 0.00 0.00 0.00 2.87
57 58 6.672218 TGGGTCATCTCTTAGGTTTATCTTCA 59.328 38.462 0.00 0.00 0.00 3.02
58 59 7.182026 TGGGTCATCTCTTAGGTTTATCTTCAA 59.818 37.037 0.00 0.00 0.00 2.69
59 60 8.214364 GGGTCATCTCTTAGGTTTATCTTCAAT 58.786 37.037 0.00 0.00 0.00 2.57
68 69 9.832445 CTTAGGTTTATCTTCAATAACTAGCCA 57.168 33.333 0.00 0.00 0.00 4.75
71 72 9.700831 AGGTTTATCTTCAATAACTAGCCATTT 57.299 29.630 0.00 0.00 0.00 2.32
72 73 9.952188 GGTTTATCTTCAATAACTAGCCATTTC 57.048 33.333 0.00 0.00 0.00 2.17
80 81 9.834628 TTCAATAACTAGCCATTTCTAAAAACG 57.165 29.630 0.00 0.00 0.00 3.60
81 82 9.005777 TCAATAACTAGCCATTTCTAAAAACGT 57.994 29.630 0.00 0.00 0.00 3.99
82 83 9.061610 CAATAACTAGCCATTTCTAAAAACGTG 57.938 33.333 0.00 0.00 0.00 4.49
83 84 5.622770 ACTAGCCATTTCTAAAAACGTGG 57.377 39.130 0.00 0.00 30.70 4.94
84 85 5.067954 ACTAGCCATTTCTAAAAACGTGGT 58.932 37.500 0.00 0.00 30.36 4.16
85 86 4.237349 AGCCATTTCTAAAAACGTGGTG 57.763 40.909 0.00 0.00 30.36 4.17
86 87 3.886505 AGCCATTTCTAAAAACGTGGTGA 59.113 39.130 0.00 0.00 30.36 4.02
87 88 4.023193 AGCCATTTCTAAAAACGTGGTGAG 60.023 41.667 0.00 0.00 30.36 3.51
88 89 4.023536 GCCATTTCTAAAAACGTGGTGAGA 60.024 41.667 0.00 0.00 30.36 3.27
89 90 5.449304 CCATTTCTAAAAACGTGGTGAGAC 58.551 41.667 0.00 0.00 0.00 3.36
90 91 5.008217 CCATTTCTAAAAACGTGGTGAGACA 59.992 40.000 0.00 0.00 0.00 3.41
91 92 6.293955 CCATTTCTAAAAACGTGGTGAGACAT 60.294 38.462 0.00 0.00 0.00 3.06
92 93 7.094975 CCATTTCTAAAAACGTGGTGAGACATA 60.095 37.037 0.00 0.00 0.00 2.29
93 94 7.972832 TTTCTAAAAACGTGGTGAGACATAT 57.027 32.000 0.00 0.00 0.00 1.78
94 95 7.972832 TTCTAAAAACGTGGTGAGACATATT 57.027 32.000 0.00 0.00 0.00 1.28
95 96 7.359262 TCTAAAAACGTGGTGAGACATATTG 57.641 36.000 0.00 0.00 0.00 1.90
96 97 6.932400 TCTAAAAACGTGGTGAGACATATTGT 59.068 34.615 0.00 0.00 0.00 2.71
97 98 5.356882 AAAACGTGGTGAGACATATTGTG 57.643 39.130 0.00 0.00 0.00 3.33
98 99 2.346803 ACGTGGTGAGACATATTGTGC 58.653 47.619 0.00 0.00 0.00 4.57
99 100 2.028112 ACGTGGTGAGACATATTGTGCT 60.028 45.455 0.00 0.00 0.00 4.40
100 101 3.194755 ACGTGGTGAGACATATTGTGCTA 59.805 43.478 0.00 0.00 0.00 3.49
101 102 3.798878 CGTGGTGAGACATATTGTGCTAG 59.201 47.826 0.00 0.00 0.00 3.42
102 103 3.557595 GTGGTGAGACATATTGTGCTAGC 59.442 47.826 8.10 8.10 0.00 3.42
103 104 2.797156 GGTGAGACATATTGTGCTAGCG 59.203 50.000 10.77 0.00 0.00 4.26
104 105 3.490933 GGTGAGACATATTGTGCTAGCGA 60.491 47.826 10.77 0.00 0.00 4.93
105 106 4.302455 GTGAGACATATTGTGCTAGCGAT 58.698 43.478 10.77 6.75 0.00 4.58
106 107 4.384247 GTGAGACATATTGTGCTAGCGATC 59.616 45.833 10.77 3.87 0.00 3.69
107 108 4.037923 TGAGACATATTGTGCTAGCGATCA 59.962 41.667 10.77 6.60 0.00 2.92
108 109 5.144692 AGACATATTGTGCTAGCGATCAT 57.855 39.130 10.77 2.11 0.00 2.45
109 110 5.167121 AGACATATTGTGCTAGCGATCATC 58.833 41.667 10.77 4.00 0.00 2.92
110 111 5.047448 AGACATATTGTGCTAGCGATCATCT 60.047 40.000 10.77 6.04 0.00 2.90
111 112 5.167121 ACATATTGTGCTAGCGATCATCTC 58.833 41.667 10.77 0.00 0.00 2.75
112 113 5.047448 ACATATTGTGCTAGCGATCATCTCT 60.047 40.000 10.77 0.00 0.00 3.10
113 114 3.808466 TTGTGCTAGCGATCATCTCTT 57.192 42.857 10.77 0.00 0.00 2.85
114 115 3.089573 TGTGCTAGCGATCATCTCTTG 57.910 47.619 10.77 0.00 0.00 3.02
115 116 2.428530 TGTGCTAGCGATCATCTCTTGT 59.571 45.455 10.77 0.00 0.00 3.16
116 117 3.049206 GTGCTAGCGATCATCTCTTGTC 58.951 50.000 10.77 0.00 0.00 3.18
117 118 2.954989 TGCTAGCGATCATCTCTTGTCT 59.045 45.455 10.77 0.00 0.00 3.41
118 119 3.382865 TGCTAGCGATCATCTCTTGTCTT 59.617 43.478 10.77 0.00 0.00 3.01
119 120 3.980775 GCTAGCGATCATCTCTTGTCTTC 59.019 47.826 0.00 0.00 0.00 2.87
120 121 4.261572 GCTAGCGATCATCTCTTGTCTTCT 60.262 45.833 0.00 0.00 0.00 2.85
121 122 4.305989 AGCGATCATCTCTTGTCTTCTC 57.694 45.455 0.00 0.00 0.00 2.87
122 123 3.953612 AGCGATCATCTCTTGTCTTCTCT 59.046 43.478 0.00 0.00 0.00 3.10
123 124 4.402155 AGCGATCATCTCTTGTCTTCTCTT 59.598 41.667 0.00 0.00 0.00 2.85
124 125 5.592282 AGCGATCATCTCTTGTCTTCTCTTA 59.408 40.000 0.00 0.00 0.00 2.10
125 126 6.096141 AGCGATCATCTCTTGTCTTCTCTTAA 59.904 38.462 0.00 0.00 0.00 1.85
126 127 6.754209 GCGATCATCTCTTGTCTTCTCTTAAA 59.246 38.462 0.00 0.00 0.00 1.52
127 128 7.437862 GCGATCATCTCTTGTCTTCTCTTAAAT 59.562 37.037 0.00 0.00 0.00 1.40
128 129 9.958234 CGATCATCTCTTGTCTTCTCTTAAATA 57.042 33.333 0.00 0.00 0.00 1.40
153 154 8.571461 AAGAGAAGACATGCATTTTCTTATGA 57.429 30.769 16.21 0.00 30.49 2.15
154 155 8.211116 AGAGAAGACATGCATTTTCTTATGAG 57.789 34.615 16.21 0.00 30.49 2.90
155 156 7.828223 AGAGAAGACATGCATTTTCTTATGAGT 59.172 33.333 16.21 0.00 30.49 3.41
156 157 7.759465 AGAAGACATGCATTTTCTTATGAGTG 58.241 34.615 16.84 0.00 29.54 3.51
157 158 5.888105 AGACATGCATTTTCTTATGAGTGC 58.112 37.500 0.00 0.00 0.00 4.40
158 159 5.651139 AGACATGCATTTTCTTATGAGTGCT 59.349 36.000 0.00 0.00 33.95 4.40
159 160 5.888105 ACATGCATTTTCTTATGAGTGCTC 58.112 37.500 0.00 0.00 33.95 4.26
160 161 5.651139 ACATGCATTTTCTTATGAGTGCTCT 59.349 36.000 0.00 0.00 33.95 4.09
161 162 5.808042 TGCATTTTCTTATGAGTGCTCTC 57.192 39.130 8.86 8.86 40.79 3.20
162 163 5.494724 TGCATTTTCTTATGAGTGCTCTCT 58.505 37.500 16.23 5.40 40.98 3.10
163 164 5.583854 TGCATTTTCTTATGAGTGCTCTCTC 59.416 40.000 16.23 7.17 40.98 3.20
164 165 5.007528 GCATTTTCTTATGAGTGCTCTCTCC 59.992 44.000 16.23 0.00 40.98 3.71
165 166 6.347696 CATTTTCTTATGAGTGCTCTCTCCT 58.652 40.000 16.23 4.72 40.98 3.69
166 167 5.590530 TTTCTTATGAGTGCTCTCTCCTC 57.409 43.478 16.23 0.00 40.98 3.71
167 168 4.518278 TCTTATGAGTGCTCTCTCCTCT 57.482 45.455 16.23 0.39 40.98 3.69
168 169 5.638530 TCTTATGAGTGCTCTCTCCTCTA 57.361 43.478 16.23 0.00 40.98 2.43
169 170 5.373222 TCTTATGAGTGCTCTCTCCTCTAC 58.627 45.833 16.23 0.00 40.98 2.59
170 171 2.428544 TGAGTGCTCTCTCCTCTACC 57.571 55.000 16.23 0.00 40.98 3.18
171 172 1.305201 GAGTGCTCTCTCCTCTACCG 58.695 60.000 8.54 0.00 37.68 4.02
172 173 0.750182 AGTGCTCTCTCCTCTACCGC 60.750 60.000 0.00 0.00 0.00 5.68
173 174 1.032657 GTGCTCTCTCCTCTACCGCA 61.033 60.000 0.00 0.00 0.00 5.69
174 175 0.106469 TGCTCTCTCCTCTACCGCAT 60.106 55.000 0.00 0.00 0.00 4.73
175 176 0.596082 GCTCTCTCCTCTACCGCATC 59.404 60.000 0.00 0.00 0.00 3.91
176 177 1.974265 CTCTCTCCTCTACCGCATCA 58.026 55.000 0.00 0.00 0.00 3.07
177 178 2.513753 CTCTCTCCTCTACCGCATCAT 58.486 52.381 0.00 0.00 0.00 2.45
178 179 2.890311 CTCTCTCCTCTACCGCATCATT 59.110 50.000 0.00 0.00 0.00 2.57
179 180 3.300388 TCTCTCCTCTACCGCATCATTT 58.700 45.455 0.00 0.00 0.00 2.32
180 181 4.470602 TCTCTCCTCTACCGCATCATTTA 58.529 43.478 0.00 0.00 0.00 1.40
181 182 5.080337 TCTCTCCTCTACCGCATCATTTAT 58.920 41.667 0.00 0.00 0.00 1.40
182 183 5.184096 TCTCTCCTCTACCGCATCATTTATC 59.816 44.000 0.00 0.00 0.00 1.75
183 184 4.220821 TCTCCTCTACCGCATCATTTATCC 59.779 45.833 0.00 0.00 0.00 2.59
184 185 4.160329 TCCTCTACCGCATCATTTATCCT 58.840 43.478 0.00 0.00 0.00 3.24
185 186 5.330233 TCCTCTACCGCATCATTTATCCTA 58.670 41.667 0.00 0.00 0.00 2.94
186 187 5.185249 TCCTCTACCGCATCATTTATCCTAC 59.815 44.000 0.00 0.00 0.00 3.18
187 188 5.055642 TCTACCGCATCATTTATCCTACG 57.944 43.478 0.00 0.00 0.00 3.51
188 189 3.746045 ACCGCATCATTTATCCTACGT 57.254 42.857 0.00 0.00 0.00 3.57
189 190 3.390135 ACCGCATCATTTATCCTACGTG 58.610 45.455 0.00 0.00 0.00 4.49
190 191 2.736721 CCGCATCATTTATCCTACGTGG 59.263 50.000 0.00 0.00 37.10 4.94
191 192 2.157668 CGCATCATTTATCCTACGTGGC 59.842 50.000 0.00 0.00 35.26 5.01
192 193 3.138304 GCATCATTTATCCTACGTGGCA 58.862 45.455 0.00 0.00 35.26 4.92
193 194 3.058914 GCATCATTTATCCTACGTGGCAC 60.059 47.826 7.79 7.79 35.26 5.01
194 195 4.380531 CATCATTTATCCTACGTGGCACT 58.619 43.478 16.72 5.47 35.26 4.40
195 196 4.481368 TCATTTATCCTACGTGGCACTT 57.519 40.909 16.72 9.21 35.26 3.16
196 197 4.839121 TCATTTATCCTACGTGGCACTTT 58.161 39.130 16.72 4.92 35.26 2.66
197 198 5.250200 TCATTTATCCTACGTGGCACTTTT 58.750 37.500 16.72 2.24 35.26 2.27
198 199 6.408035 TCATTTATCCTACGTGGCACTTTTA 58.592 36.000 16.72 3.36 35.26 1.52
199 200 6.879993 TCATTTATCCTACGTGGCACTTTTAA 59.120 34.615 16.72 2.68 35.26 1.52
200 201 6.730960 TTTATCCTACGTGGCACTTTTAAG 57.269 37.500 16.72 0.62 35.26 1.85
201 202 4.546829 ATCCTACGTGGCACTTTTAAGA 57.453 40.909 16.72 5.33 35.26 2.10
202 203 4.546829 TCCTACGTGGCACTTTTAAGAT 57.453 40.909 16.72 0.00 35.26 2.40
203 204 5.664294 TCCTACGTGGCACTTTTAAGATA 57.336 39.130 16.72 0.00 35.26 1.98
204 205 5.657474 TCCTACGTGGCACTTTTAAGATAG 58.343 41.667 16.72 0.00 35.26 2.08
205 206 4.270325 CCTACGTGGCACTTTTAAGATAGC 59.730 45.833 16.72 0.00 0.00 2.97
206 207 3.670625 ACGTGGCACTTTTAAGATAGCA 58.329 40.909 16.72 0.00 0.00 3.49
207 208 3.435671 ACGTGGCACTTTTAAGATAGCAC 59.564 43.478 16.72 0.00 0.00 4.40
208 209 3.181510 CGTGGCACTTTTAAGATAGCACC 60.182 47.826 16.72 0.00 0.00 5.01
209 210 3.756434 GTGGCACTTTTAAGATAGCACCA 59.244 43.478 11.13 0.00 0.00 4.17
210 211 4.399303 GTGGCACTTTTAAGATAGCACCAT 59.601 41.667 11.13 0.00 0.00 3.55
211 212 5.016173 TGGCACTTTTAAGATAGCACCATT 58.984 37.500 0.00 0.00 0.00 3.16
212 213 5.105797 TGGCACTTTTAAGATAGCACCATTG 60.106 40.000 0.00 0.00 0.00 2.82
213 214 5.105756 GGCACTTTTAAGATAGCACCATTGT 60.106 40.000 0.00 0.00 0.00 2.71
214 215 6.094881 GGCACTTTTAAGATAGCACCATTGTA 59.905 38.462 0.00 0.00 0.00 2.41
215 216 6.967199 GCACTTTTAAGATAGCACCATTGTAC 59.033 38.462 0.00 0.00 0.00 2.90
216 217 7.361713 GCACTTTTAAGATAGCACCATTGTACA 60.362 37.037 0.00 0.00 0.00 2.90
217 218 8.677300 CACTTTTAAGATAGCACCATTGTACAT 58.323 33.333 0.00 0.00 0.00 2.29
218 219 8.677300 ACTTTTAAGATAGCACCATTGTACATG 58.323 33.333 0.00 0.00 0.00 3.21
219 220 6.618287 TTAAGATAGCACCATTGTACATGC 57.382 37.500 10.53 10.53 38.39 4.06
220 221 3.480470 AGATAGCACCATTGTACATGCC 58.520 45.455 14.08 1.71 38.92 4.40
233 234 7.068103 CCATTGTACATGCCCTTAAAGATGTTA 59.932 37.037 0.00 0.00 31.56 2.41
266 267 9.620259 TTAGCAACCAATTTTTAAAAGGTCAAT 57.380 25.926 9.96 3.62 31.68 2.57
267 268 7.929159 AGCAACCAATTTTTAAAAGGTCAATG 58.071 30.769 9.96 7.05 31.68 2.82
407 410 2.675075 CGGCCCCAAAACGTCCAT 60.675 61.111 0.00 0.00 0.00 3.41
413 416 2.167662 CCCCAAAACGTCCATTTAGCT 58.832 47.619 0.00 0.00 0.00 3.32
431 434 1.465354 GCTATCACGACGTCAGTTCGT 60.465 52.381 17.16 4.73 46.88 3.85
438 441 0.501435 GACGTCAGTTCGTGTTTCCG 59.499 55.000 11.55 0.00 44.21 4.30
447 451 0.241749 TCGTGTTTCCGACGCATAGT 59.758 50.000 0.00 0.00 38.71 2.12
507 515 0.692476 CCAGGTTGAGTCATCCACCA 59.308 55.000 20.06 0.00 42.50 4.17
537 545 1.195448 CACAAGTCATGTCGGCTTCAC 59.805 52.381 0.00 0.00 41.46 3.18
543 551 1.344438 TCATGTCGGCTTCACAGAGTT 59.656 47.619 0.00 0.00 0.00 3.01
570 578 0.535335 TCCGGCATAGAGAACCACAC 59.465 55.000 0.00 0.00 0.00 3.82
619 628 5.221722 GCCAAGGGAAGAGGAAAAAGAAAAT 60.222 40.000 0.00 0.00 0.00 1.82
632 641 6.292328 GGAAAAAGAAAATTGTCCAAGAAGCG 60.292 38.462 0.00 0.00 0.00 4.68
739 787 2.342279 GCCCACACGTCAGCTACA 59.658 61.111 0.00 0.00 0.00 2.74
740 788 2.027625 GCCCACACGTCAGCTACAC 61.028 63.158 0.00 0.00 0.00 2.90
741 789 1.374252 CCCACACGTCAGCTACACC 60.374 63.158 0.00 0.00 0.00 4.16
743 791 1.374252 CACACGTCAGCTACACCCC 60.374 63.158 0.00 0.00 0.00 4.95
817 877 5.988310 TGAGGTAAGAATTTGAGTCCGTA 57.012 39.130 0.00 0.00 0.00 4.02
866 927 2.191128 AATGCAGTCCACCTCTGTTC 57.809 50.000 0.00 0.00 35.60 3.18
1225 1299 4.974438 ACGGCCCCTCCAAGGTGA 62.974 66.667 0.00 0.00 31.93 4.02
1267 1352 2.361610 ATCGCCCAGCCCACTTTG 60.362 61.111 0.00 0.00 0.00 2.77
1309 1399 6.149474 GTCTGGTTGCTTGTACATATTGAGTT 59.851 38.462 0.00 0.00 0.00 3.01
1310 1400 6.714810 TCTGGTTGCTTGTACATATTGAGTTT 59.285 34.615 0.00 0.00 0.00 2.66
1311 1401 6.676950 TGGTTGCTTGTACATATTGAGTTTG 58.323 36.000 0.00 0.00 0.00 2.93
1312 1402 6.264292 TGGTTGCTTGTACATATTGAGTTTGT 59.736 34.615 0.00 0.00 0.00 2.83
1477 1577 8.948631 TTGATACTTGTGAATAAGATGAGGTC 57.051 34.615 0.00 0.00 0.00 3.85
1506 1609 3.670625 TCTGAAAATTGGTGTAGTCCGG 58.329 45.455 0.00 0.00 0.00 5.14
1568 1671 7.830940 ATTGAGAGATCATAATTCGATGCTC 57.169 36.000 0.00 0.00 0.00 4.26
1612 1715 4.211164 TGTGAGCTCGTGTCAATTTTGTAG 59.789 41.667 9.64 0.00 0.00 2.74
1618 1721 5.846473 GCTCGTGTCAATTTTGTAGAGAAAC 59.154 40.000 0.00 0.00 0.00 2.78
1636 1741 7.762382 AGAGAAACGGACAATTCAAATAATCC 58.238 34.615 0.00 0.00 0.00 3.01
1651 1756 2.550830 AATCCGAGTGTTCTGCAAGT 57.449 45.000 0.00 0.00 33.76 3.16
1681 1786 7.224949 GGCACAAGTAATGAAGTTATAGTCCTC 59.775 40.741 0.00 0.00 0.00 3.71
1695 1800 9.012161 AGTTATAGTCCTCGTATTCTAATGTCC 57.988 37.037 0.00 0.00 0.00 4.02
1742 1847 2.373169 GGTCATCCTGGCAATGGATCTA 59.627 50.000 5.35 0.00 41.94 1.98
1779 1884 4.283722 TCCTCAGAACCAGGTCTAAAGAAC 59.716 45.833 0.00 0.00 32.20 3.01
1785 1891 2.289506 ACCAGGTCTAAAGAACGGAAGC 60.290 50.000 11.26 0.00 36.72 3.86
1790 1896 2.096013 GTCTAAAGAACGGAAGCCATGC 59.904 50.000 0.00 0.00 0.00 4.06
2051 2169 5.671493 CCACCTCATCGACCTTATTACTTT 58.329 41.667 0.00 0.00 0.00 2.66
2100 2226 8.947055 AGTGCTACAGAAAATTGTTTGATTTT 57.053 26.923 0.00 0.00 40.80 1.82
2126 2252 8.637196 ATTGTTCTACCTGATGATATACGAGA 57.363 34.615 0.00 0.00 0.00 4.04
2127 2253 8.637196 TTGTTCTACCTGATGATATACGAGAT 57.363 34.615 0.00 0.00 0.00 2.75
2128 2254 9.734984 TTGTTCTACCTGATGATATACGAGATA 57.265 33.333 0.00 0.00 0.00 1.98
2129 2255 9.384764 TGTTCTACCTGATGATATACGAGATAG 57.615 37.037 0.00 0.00 0.00 2.08
2130 2256 9.602568 GTTCTACCTGATGATATACGAGATAGA 57.397 37.037 0.00 0.00 0.00 1.98
2131 2257 9.825109 TTCTACCTGATGATATACGAGATAGAG 57.175 37.037 0.00 0.00 0.00 2.43
2132 2258 8.983789 TCTACCTGATGATATACGAGATAGAGT 58.016 37.037 0.00 0.00 0.00 3.24
2133 2259 9.607988 CTACCTGATGATATACGAGATAGAGTT 57.392 37.037 0.00 0.00 0.00 3.01
2134 2260 8.275015 ACCTGATGATATACGAGATAGAGTTG 57.725 38.462 0.00 0.00 0.00 3.16
2135 2261 7.338196 ACCTGATGATATACGAGATAGAGTTGG 59.662 40.741 0.00 0.00 0.00 3.77
2136 2262 7.201776 CCTGATGATATACGAGATAGAGTTGGG 60.202 44.444 0.00 0.00 0.00 4.12
2137 2263 6.603599 TGATGATATACGAGATAGAGTTGGGG 59.396 42.308 0.00 0.00 0.00 4.96
2138 2264 5.888901 TGATATACGAGATAGAGTTGGGGT 58.111 41.667 0.00 0.00 0.00 4.95
2139 2265 7.024345 TGATATACGAGATAGAGTTGGGGTA 57.976 40.000 0.00 0.00 0.00 3.69
2140 2266 7.110810 TGATATACGAGATAGAGTTGGGGTAG 58.889 42.308 0.00 0.00 0.00 3.18
2141 2267 2.308690 ACGAGATAGAGTTGGGGTAGC 58.691 52.381 0.00 0.00 0.00 3.58
2142 2268 2.307768 CGAGATAGAGTTGGGGTAGCA 58.692 52.381 0.00 0.00 0.00 3.49
2143 2269 2.034812 CGAGATAGAGTTGGGGTAGCAC 59.965 54.545 0.00 0.00 0.00 4.40
2144 2270 2.365941 GAGATAGAGTTGGGGTAGCACC 59.634 54.545 0.00 0.00 37.60 5.01
2145 2271 2.116238 GATAGAGTTGGGGTAGCACCA 58.884 52.381 7.49 0.00 41.02 4.17
2146 2272 2.032965 TAGAGTTGGGGTAGCACCAA 57.967 50.000 9.86 9.86 45.25 3.67
2151 2277 2.214376 TTGGGGTAGCACCAATTGAG 57.786 50.000 7.12 0.00 42.75 3.02
2152 2278 0.331278 TGGGGTAGCACCAATTGAGG 59.669 55.000 7.12 0.00 41.02 3.86
2153 2279 0.623723 GGGGTAGCACCAATTGAGGA 59.376 55.000 7.12 0.00 41.02 3.71
2154 2280 1.408822 GGGGTAGCACCAATTGAGGAG 60.409 57.143 7.12 0.00 41.02 3.69
2155 2281 1.559682 GGGTAGCACCAATTGAGGAGA 59.440 52.381 7.12 0.00 41.02 3.71
2156 2282 2.026262 GGGTAGCACCAATTGAGGAGAA 60.026 50.000 7.12 0.00 41.02 2.87
2157 2283 3.274288 GGTAGCACCAATTGAGGAGAAG 58.726 50.000 7.12 0.00 38.42 2.85
2158 2284 1.831580 AGCACCAATTGAGGAGAAGC 58.168 50.000 7.12 0.92 0.00 3.86
2159 2285 1.353694 AGCACCAATTGAGGAGAAGCT 59.646 47.619 7.12 3.13 0.00 3.74
2160 2286 2.165998 GCACCAATTGAGGAGAAGCTT 58.834 47.619 7.12 0.00 0.00 3.74
2161 2287 2.094854 GCACCAATTGAGGAGAAGCTTG 60.095 50.000 2.10 0.00 0.00 4.01
2162 2288 3.152341 CACCAATTGAGGAGAAGCTTGT 58.848 45.455 2.10 0.00 0.00 3.16
2163 2289 3.190118 CACCAATTGAGGAGAAGCTTGTC 59.810 47.826 15.04 15.04 0.00 3.18
2164 2290 2.751806 CCAATTGAGGAGAAGCTTGTCC 59.248 50.000 30.49 30.49 40.72 4.02
2165 2291 3.415212 CAATTGAGGAGAAGCTTGTCCA 58.585 45.455 36.25 21.34 42.72 4.02
2166 2292 3.795688 ATTGAGGAGAAGCTTGTCCAA 57.204 42.857 36.25 25.72 42.72 3.53
2167 2293 2.550830 TGAGGAGAAGCTTGTCCAAC 57.449 50.000 36.25 29.11 42.72 3.77
2168 2294 1.768275 TGAGGAGAAGCTTGTCCAACA 59.232 47.619 36.25 30.84 42.72 3.33
2169 2295 2.373169 TGAGGAGAAGCTTGTCCAACAT 59.627 45.455 36.25 20.88 42.72 2.71
2170 2296 3.006247 GAGGAGAAGCTTGTCCAACATC 58.994 50.000 36.25 24.18 42.72 3.06
2171 2297 1.734465 GGAGAAGCTTGTCCAACATCG 59.266 52.381 32.06 0.00 40.18 3.84
2172 2298 2.417719 GAGAAGCTTGTCCAACATCGT 58.582 47.619 12.50 0.00 0.00 3.73
2173 2299 2.413453 GAGAAGCTTGTCCAACATCGTC 59.587 50.000 12.50 0.00 0.00 4.20
2174 2300 2.037772 AGAAGCTTGTCCAACATCGTCT 59.962 45.455 2.10 0.00 0.00 4.18
2175 2301 1.800805 AGCTTGTCCAACATCGTCTG 58.199 50.000 0.00 0.00 0.00 3.51
2176 2302 1.344438 AGCTTGTCCAACATCGTCTGA 59.656 47.619 0.00 0.00 0.00 3.27
2177 2303 1.728971 GCTTGTCCAACATCGTCTGAG 59.271 52.381 0.00 0.00 0.00 3.35
2178 2304 2.610479 GCTTGTCCAACATCGTCTGAGA 60.610 50.000 0.00 0.00 0.00 3.27
2179 2305 3.854666 CTTGTCCAACATCGTCTGAGAT 58.145 45.455 0.00 0.00 0.00 2.75
2183 2309 2.567169 TCCAACATCGTCTGAGATGGTT 59.433 45.455 16.20 0.00 45.46 3.67
2184 2310 3.007940 TCCAACATCGTCTGAGATGGTTT 59.992 43.478 16.20 0.00 45.46 3.27
2185 2311 3.125829 CCAACATCGTCTGAGATGGTTTG 59.874 47.826 16.20 12.97 45.46 2.93
2186 2312 3.125829 CAACATCGTCTGAGATGGTTTGG 59.874 47.826 16.20 0.00 45.46 3.28
2187 2313 2.283298 CATCGTCTGAGATGGTTTGGG 58.717 52.381 1.24 0.00 43.07 4.12
2188 2314 0.036388 TCGTCTGAGATGGTTTGGGC 60.036 55.000 1.24 0.00 0.00 5.36
2189 2315 0.321564 CGTCTGAGATGGTTTGGGCA 60.322 55.000 0.00 0.00 0.00 5.36
2190 2316 1.679944 CGTCTGAGATGGTTTGGGCAT 60.680 52.381 0.00 0.00 0.00 4.40
2191 2317 2.419990 CGTCTGAGATGGTTTGGGCATA 60.420 50.000 0.00 0.00 0.00 3.14
2192 2318 3.745480 CGTCTGAGATGGTTTGGGCATAT 60.745 47.826 0.00 0.00 0.00 1.78
2193 2319 4.210331 GTCTGAGATGGTTTGGGCATATT 58.790 43.478 0.00 0.00 0.00 1.28
2194 2320 4.276926 GTCTGAGATGGTTTGGGCATATTC 59.723 45.833 0.00 0.00 0.00 1.75
2195 2321 4.079844 TCTGAGATGGTTTGGGCATATTCA 60.080 41.667 0.00 0.00 0.00 2.57
2196 2322 4.209538 TGAGATGGTTTGGGCATATTCAG 58.790 43.478 0.00 0.00 0.00 3.02
2197 2323 2.961062 AGATGGTTTGGGCATATTCAGC 59.039 45.455 0.00 0.00 0.00 4.26
2198 2324 1.102154 TGGTTTGGGCATATTCAGCG 58.898 50.000 0.00 0.00 0.00 5.18
2199 2325 0.249031 GGTTTGGGCATATTCAGCGC 60.249 55.000 0.00 0.00 44.24 5.92
2202 2328 3.348236 GGGCATATTCAGCGCAGG 58.652 61.111 11.47 0.20 43.54 4.85
2203 2329 2.641559 GGCATATTCAGCGCAGGC 59.358 61.111 11.47 0.29 40.37 4.85
2204 2330 2.641559 GCATATTCAGCGCAGGCC 59.358 61.111 11.47 0.00 41.24 5.19
2205 2331 1.895707 GCATATTCAGCGCAGGCCT 60.896 57.895 11.47 0.00 41.24 5.19
2206 2332 1.849976 GCATATTCAGCGCAGGCCTC 61.850 60.000 11.47 0.00 41.24 4.70
2207 2333 1.072159 ATATTCAGCGCAGGCCTCC 59.928 57.895 11.47 0.00 41.24 4.30
2208 2334 1.699054 ATATTCAGCGCAGGCCTCCA 61.699 55.000 11.47 0.00 41.24 3.86
2209 2335 2.315781 TATTCAGCGCAGGCCTCCAG 62.316 60.000 11.47 0.00 41.24 3.86
2211 2337 4.399395 CAGCGCAGGCCTCCAGAA 62.399 66.667 11.47 0.00 41.24 3.02
2212 2338 4.093291 AGCGCAGGCCTCCAGAAG 62.093 66.667 11.47 0.00 41.24 2.85
2214 2340 4.093291 CGCAGGCCTCCAGAAGCT 62.093 66.667 0.00 0.00 0.00 3.74
2215 2341 2.124778 GCAGGCCTCCAGAAGCTC 60.125 66.667 0.00 0.00 0.00 4.09
2216 2342 2.588989 CAGGCCTCCAGAAGCTCC 59.411 66.667 0.00 0.00 0.00 4.70
2217 2343 2.123632 AGGCCTCCAGAAGCTCCA 59.876 61.111 0.00 0.00 0.00 3.86
2218 2344 1.994507 AGGCCTCCAGAAGCTCCAG 60.995 63.158 0.00 0.00 0.00 3.86
2219 2345 2.297129 GGCCTCCAGAAGCTCCAGT 61.297 63.158 0.00 0.00 0.00 4.00
2220 2346 1.078567 GCCTCCAGAAGCTCCAGTG 60.079 63.158 0.00 0.00 0.00 3.66
2221 2347 1.078567 CCTCCAGAAGCTCCAGTGC 60.079 63.158 0.00 0.00 0.00 4.40
2222 2348 1.675801 CTCCAGAAGCTCCAGTGCA 59.324 57.895 0.00 0.00 34.99 4.57
2223 2349 0.252479 CTCCAGAAGCTCCAGTGCAT 59.748 55.000 0.00 0.00 34.99 3.96
2224 2350 1.483827 CTCCAGAAGCTCCAGTGCATA 59.516 52.381 0.00 0.00 34.99 3.14
2225 2351 1.483827 TCCAGAAGCTCCAGTGCATAG 59.516 52.381 0.00 0.00 34.99 2.23
2226 2352 1.297664 CAGAAGCTCCAGTGCATAGC 58.702 55.000 0.00 0.00 36.48 2.97
2227 2353 0.179089 AGAAGCTCCAGTGCATAGCG 60.179 55.000 0.00 0.00 41.19 4.26
2228 2354 1.153289 AAGCTCCAGTGCATAGCGG 60.153 57.895 0.00 0.00 41.19 5.52
2229 2355 1.617018 AAGCTCCAGTGCATAGCGGA 61.617 55.000 0.00 0.00 41.19 5.54
2230 2356 1.884926 GCTCCAGTGCATAGCGGAC 60.885 63.158 0.00 0.00 35.88 4.79
2231 2357 1.589993 CTCCAGTGCATAGCGGACG 60.590 63.158 0.00 0.00 41.69 4.79
2232 2358 2.586079 CCAGTGCATAGCGGACGG 60.586 66.667 0.00 0.00 41.69 4.79
2233 2359 3.264897 CAGTGCATAGCGGACGGC 61.265 66.667 0.00 0.00 41.69 5.68
2242 2368 3.849953 GCGGACGGCTAAAGCGTG 61.850 66.667 0.00 0.00 43.26 5.34
2243 2369 3.849953 CGGACGGCTAAAGCGTGC 61.850 66.667 0.00 0.00 43.26 5.34
2244 2370 3.849953 GGACGGCTAAAGCGTGCG 61.850 66.667 0.00 1.74 43.26 5.34
2245 2371 3.849953 GACGGCTAAAGCGTGCGG 61.850 66.667 0.00 0.00 43.26 5.69
2246 2372 4.367023 ACGGCTAAAGCGTGCGGA 62.367 61.111 0.00 0.00 43.26 5.54
2247 2373 3.554692 CGGCTAAAGCGTGCGGAG 61.555 66.667 0.00 0.00 43.26 4.63
2248 2374 2.125673 GGCTAAAGCGTGCGGAGA 60.126 61.111 0.00 0.00 43.26 3.71
2249 2375 1.740296 GGCTAAAGCGTGCGGAGAA 60.740 57.895 0.00 0.00 43.26 2.87
2250 2376 1.090052 GGCTAAAGCGTGCGGAGAAT 61.090 55.000 0.00 0.00 43.26 2.40
2251 2377 0.026803 GCTAAAGCGTGCGGAGAATG 59.973 55.000 0.00 0.00 0.00 2.67
2252 2378 1.359848 CTAAAGCGTGCGGAGAATGT 58.640 50.000 0.00 0.00 0.00 2.71
2253 2379 1.324736 CTAAAGCGTGCGGAGAATGTC 59.675 52.381 0.00 0.00 0.00 3.06
2254 2380 0.602638 AAAGCGTGCGGAGAATGTCA 60.603 50.000 0.00 0.00 0.00 3.58
2255 2381 0.602638 AAGCGTGCGGAGAATGTCAA 60.603 50.000 0.00 0.00 0.00 3.18
2256 2382 1.016130 AGCGTGCGGAGAATGTCAAG 61.016 55.000 0.00 0.00 0.00 3.02
2257 2383 1.014044 GCGTGCGGAGAATGTCAAGA 61.014 55.000 0.00 0.00 0.00 3.02
2258 2384 0.994995 CGTGCGGAGAATGTCAAGAG 59.005 55.000 0.00 0.00 0.00 2.85
2259 2385 1.402852 CGTGCGGAGAATGTCAAGAGA 60.403 52.381 0.00 0.00 0.00 3.10
2260 2386 2.266554 GTGCGGAGAATGTCAAGAGAG 58.733 52.381 0.00 0.00 0.00 3.20
2261 2387 1.205655 TGCGGAGAATGTCAAGAGAGG 59.794 52.381 0.00 0.00 0.00 3.69
2262 2388 1.472376 GCGGAGAATGTCAAGAGAGGG 60.472 57.143 0.00 0.00 0.00 4.30
2263 2389 1.472376 CGGAGAATGTCAAGAGAGGGC 60.472 57.143 0.00 0.00 0.00 5.19
2264 2390 1.472376 GGAGAATGTCAAGAGAGGGCG 60.472 57.143 0.00 0.00 0.00 6.13
2265 2391 0.539051 AGAATGTCAAGAGAGGGCGG 59.461 55.000 0.00 0.00 0.00 6.13
2266 2392 0.462759 GAATGTCAAGAGAGGGCGGG 60.463 60.000 0.00 0.00 0.00 6.13
2267 2393 1.915078 AATGTCAAGAGAGGGCGGGG 61.915 60.000 0.00 0.00 0.00 5.73
2268 2394 3.003763 GTCAAGAGAGGGCGGGGT 61.004 66.667 0.00 0.00 0.00 4.95
2269 2395 1.684734 GTCAAGAGAGGGCGGGGTA 60.685 63.158 0.00 0.00 0.00 3.69
2270 2396 1.381327 TCAAGAGAGGGCGGGGTAG 60.381 63.158 0.00 0.00 0.00 3.18
2271 2397 1.381327 CAAGAGAGGGCGGGGTAGA 60.381 63.158 0.00 0.00 0.00 2.59
2272 2398 1.381463 AAGAGAGGGCGGGGTAGAC 60.381 63.158 0.00 0.00 0.00 2.59
2273 2399 2.838693 GAGAGGGCGGGGTAGACC 60.839 72.222 0.00 0.00 40.48 3.85
2283 2409 2.773993 GGGGTAGACCGAATTTGACA 57.226 50.000 0.00 0.00 41.60 3.58
2284 2410 3.277142 GGGGTAGACCGAATTTGACAT 57.723 47.619 0.00 0.00 41.60 3.06
2285 2411 2.943033 GGGGTAGACCGAATTTGACATG 59.057 50.000 0.00 0.00 41.60 3.21
2286 2412 2.943033 GGGTAGACCGAATTTGACATGG 59.057 50.000 0.00 0.00 36.71 3.66
2287 2413 2.943033 GGTAGACCGAATTTGACATGGG 59.057 50.000 0.00 0.00 0.00 4.00
2288 2414 3.370103 GGTAGACCGAATTTGACATGGGA 60.370 47.826 0.00 0.00 0.00 4.37
2289 2415 2.991250 AGACCGAATTTGACATGGGAG 58.009 47.619 0.00 0.00 0.00 4.30
2290 2416 2.017049 GACCGAATTTGACATGGGAGG 58.983 52.381 0.00 0.00 0.00 4.30
2291 2417 1.633432 ACCGAATTTGACATGGGAGGA 59.367 47.619 0.00 0.00 0.00 3.71
2292 2418 2.292267 CCGAATTTGACATGGGAGGAG 58.708 52.381 0.00 0.00 0.00 3.69
2293 2419 2.356125 CCGAATTTGACATGGGAGGAGT 60.356 50.000 0.00 0.00 0.00 3.85
2294 2420 2.939103 CGAATTTGACATGGGAGGAGTC 59.061 50.000 0.00 0.00 0.00 3.36
2295 2421 3.282885 GAATTTGACATGGGAGGAGTCC 58.717 50.000 0.00 0.00 43.05 3.85
2296 2422 0.613260 TTTGACATGGGAGGAGTCCG 59.387 55.000 2.76 0.00 45.05 4.79
2297 2423 0.544357 TTGACATGGGAGGAGTCCGT 60.544 55.000 2.76 0.00 45.05 4.69
2298 2424 0.544357 TGACATGGGAGGAGTCCGTT 60.544 55.000 2.76 0.00 45.05 4.44
2299 2425 1.272816 TGACATGGGAGGAGTCCGTTA 60.273 52.381 2.76 0.00 45.05 3.18
2300 2426 1.829222 GACATGGGAGGAGTCCGTTAA 59.171 52.381 2.76 0.00 45.05 2.01
2301 2427 1.831736 ACATGGGAGGAGTCCGTTAAG 59.168 52.381 2.76 0.00 45.05 1.85
2302 2428 2.108168 CATGGGAGGAGTCCGTTAAGA 58.892 52.381 2.76 0.00 45.05 2.10
2303 2429 1.848652 TGGGAGGAGTCCGTTAAGAG 58.151 55.000 2.76 0.00 45.05 2.85
2304 2430 1.356738 TGGGAGGAGTCCGTTAAGAGA 59.643 52.381 2.76 0.00 45.05 3.10
2305 2431 2.025898 GGGAGGAGTCCGTTAAGAGAG 58.974 57.143 2.76 0.00 45.05 3.20
2306 2432 2.356947 GGGAGGAGTCCGTTAAGAGAGA 60.357 54.545 2.76 0.00 45.05 3.10
2307 2433 2.684374 GGAGGAGTCCGTTAAGAGAGAC 59.316 54.545 2.76 0.00 31.37 3.36
2308 2434 2.684374 GAGGAGTCCGTTAAGAGAGACC 59.316 54.545 2.76 0.00 0.00 3.85
2309 2435 2.309458 AGGAGTCCGTTAAGAGAGACCT 59.691 50.000 2.76 0.00 0.00 3.85
2310 2436 2.424246 GGAGTCCGTTAAGAGAGACCTG 59.576 54.545 0.00 0.00 0.00 4.00
2311 2437 3.345414 GAGTCCGTTAAGAGAGACCTGA 58.655 50.000 0.00 0.00 0.00 3.86
2312 2438 3.757493 GAGTCCGTTAAGAGAGACCTGAA 59.243 47.826 0.00 0.00 0.00 3.02
2313 2439 3.759618 AGTCCGTTAAGAGAGACCTGAAG 59.240 47.826 0.00 0.00 0.00 3.02
2314 2440 3.090037 TCCGTTAAGAGAGACCTGAAGG 58.910 50.000 0.00 0.00 42.17 3.46
2315 2441 3.090037 CCGTTAAGAGAGACCTGAAGGA 58.910 50.000 2.62 0.00 38.94 3.36
2316 2442 3.702045 CCGTTAAGAGAGACCTGAAGGAT 59.298 47.826 2.62 0.00 38.94 3.24
2317 2443 4.160626 CCGTTAAGAGAGACCTGAAGGATT 59.839 45.833 2.62 0.00 38.94 3.01
2318 2444 5.105752 CGTTAAGAGAGACCTGAAGGATTG 58.894 45.833 2.62 0.00 38.94 2.67
2319 2445 5.423886 GTTAAGAGAGACCTGAAGGATTGG 58.576 45.833 2.62 0.00 38.94 3.16
2320 2446 3.481559 AGAGAGACCTGAAGGATTGGA 57.518 47.619 2.62 0.00 38.94 3.53
2321 2447 3.373830 AGAGAGACCTGAAGGATTGGAG 58.626 50.000 2.62 0.00 38.94 3.86
2322 2448 3.103742 GAGAGACCTGAAGGATTGGAGT 58.896 50.000 2.62 0.00 38.94 3.85
2323 2449 4.017037 AGAGAGACCTGAAGGATTGGAGTA 60.017 45.833 2.62 0.00 38.94 2.59
2324 2450 4.889780 AGAGACCTGAAGGATTGGAGTAT 58.110 43.478 2.62 0.00 38.94 2.12
2325 2451 4.898861 AGAGACCTGAAGGATTGGAGTATC 59.101 45.833 2.62 0.00 38.94 2.24
2326 2452 4.624913 AGACCTGAAGGATTGGAGTATCA 58.375 43.478 2.62 0.00 38.94 2.15
2327 2453 4.407296 AGACCTGAAGGATTGGAGTATCAC 59.593 45.833 2.62 0.00 38.94 3.06
2328 2454 3.456277 ACCTGAAGGATTGGAGTATCACC 59.544 47.826 2.62 0.00 38.94 4.02
2329 2455 3.455910 CCTGAAGGATTGGAGTATCACCA 59.544 47.826 0.00 0.00 34.60 4.17
2330 2456 6.527086 ACCTGAAGGATTGGAGTATCACCAA 61.527 44.000 2.62 0.00 43.61 3.67
2331 2457 7.950045 ACCTGAAGGATTGGAGTATCACCAAA 61.950 42.308 2.62 0.00 43.17 3.28
2332 2458 9.647145 ACCTGAAGGATTGGAGTATCACCAAAG 62.647 44.444 2.62 0.00 43.17 2.77
2338 2464 5.344743 TTGGAGTATCACCAAAGAGCTAG 57.655 43.478 0.00 0.00 43.22 3.42
2339 2465 3.133003 TGGAGTATCACCAAAGAGCTAGC 59.867 47.826 6.62 6.62 36.25 3.42
2340 2466 3.386402 GGAGTATCACCAAAGAGCTAGCT 59.614 47.826 19.45 19.45 36.25 3.32
2341 2467 4.585162 GGAGTATCACCAAAGAGCTAGCTA 59.415 45.833 19.38 0.00 36.25 3.32
2342 2468 5.245075 GGAGTATCACCAAAGAGCTAGCTAT 59.755 44.000 19.38 12.73 36.25 2.97
2343 2469 6.095432 AGTATCACCAAAGAGCTAGCTATG 57.905 41.667 19.38 16.41 0.00 2.23
2344 2470 3.827008 TCACCAAAGAGCTAGCTATGG 57.173 47.619 28.91 28.91 33.36 2.74
2345 2471 3.374764 TCACCAAAGAGCTAGCTATGGA 58.625 45.455 33.71 19.25 32.26 3.41
2346 2472 3.133003 TCACCAAAGAGCTAGCTATGGAC 59.867 47.826 33.71 18.05 32.26 4.02
2347 2473 3.107601 ACCAAAGAGCTAGCTATGGACA 58.892 45.455 33.71 0.00 32.26 4.02
2348 2474 3.133721 ACCAAAGAGCTAGCTATGGACAG 59.866 47.826 33.71 17.94 32.26 3.51
2349 2475 3.494048 CCAAAGAGCTAGCTATGGACAGG 60.494 52.174 27.69 15.84 30.53 4.00
2350 2476 2.008242 AGAGCTAGCTATGGACAGGG 57.992 55.000 19.38 0.00 0.00 4.45
2351 2477 0.972883 GAGCTAGCTATGGACAGGGG 59.027 60.000 19.38 0.00 0.00 4.79
2352 2478 0.266152 AGCTAGCTATGGACAGGGGT 59.734 55.000 17.69 0.00 0.00 4.95
2353 2479 0.394565 GCTAGCTATGGACAGGGGTG 59.605 60.000 7.70 0.00 0.00 4.61
2354 2480 0.394565 CTAGCTATGGACAGGGGTGC 59.605 60.000 0.00 0.00 35.66 5.01
2355 2481 1.399744 TAGCTATGGACAGGGGTGCG 61.400 60.000 0.00 0.00 38.35 5.34
2356 2482 3.031417 GCTATGGACAGGGGTGCGT 62.031 63.158 0.00 0.00 38.35 5.24
2357 2483 1.153369 CTATGGACAGGGGTGCGTG 60.153 63.158 0.00 0.00 38.35 5.34
2358 2484 2.593468 CTATGGACAGGGGTGCGTGG 62.593 65.000 0.00 0.00 38.35 4.94
2360 2486 3.948719 GGACAGGGGTGCGTGGAA 61.949 66.667 0.00 0.00 0.00 3.53
2361 2487 2.358737 GACAGGGGTGCGTGGAAG 60.359 66.667 0.00 0.00 0.00 3.46
2362 2488 4.643387 ACAGGGGTGCGTGGAAGC 62.643 66.667 0.00 0.00 37.71 3.86
2363 2489 4.335647 CAGGGGTGCGTGGAAGCT 62.336 66.667 0.00 0.00 38.13 3.74
2364 2490 3.570212 AGGGGTGCGTGGAAGCTT 61.570 61.111 0.00 0.00 38.13 3.74
2365 2491 3.365265 GGGGTGCGTGGAAGCTTG 61.365 66.667 2.10 0.00 38.13 4.01
2366 2492 4.043200 GGGTGCGTGGAAGCTTGC 62.043 66.667 11.58 11.58 38.13 4.01
2367 2493 2.980233 GGTGCGTGGAAGCTTGCT 60.980 61.111 19.34 0.00 38.13 3.91
2368 2494 1.671054 GGTGCGTGGAAGCTTGCTA 60.671 57.895 19.34 2.82 38.13 3.49
2369 2495 1.026718 GGTGCGTGGAAGCTTGCTAT 61.027 55.000 19.34 0.00 38.13 2.97
2370 2496 0.375106 GTGCGTGGAAGCTTGCTATC 59.625 55.000 19.34 8.59 38.13 2.08
2371 2497 0.744414 TGCGTGGAAGCTTGCTATCC 60.744 55.000 19.34 6.99 38.13 2.59
2372 2498 0.744414 GCGTGGAAGCTTGCTATCCA 60.744 55.000 19.34 9.80 40.84 3.41
2373 2499 1.959042 CGTGGAAGCTTGCTATCCAT 58.041 50.000 19.34 0.00 44.55 3.41
2374 2500 1.600957 CGTGGAAGCTTGCTATCCATG 59.399 52.381 19.34 20.51 44.55 3.66
2375 2501 2.648059 GTGGAAGCTTGCTATCCATGT 58.352 47.619 19.34 0.00 44.55 3.21
2376 2502 2.357009 GTGGAAGCTTGCTATCCATGTG 59.643 50.000 19.34 0.00 44.55 3.21
2377 2503 1.336125 GGAAGCTTGCTATCCATGTGC 59.664 52.381 11.19 0.00 33.30 4.57
2378 2504 1.336125 GAAGCTTGCTATCCATGTGCC 59.664 52.381 2.10 0.00 0.00 5.01
2379 2505 0.256752 AGCTTGCTATCCATGTGCCA 59.743 50.000 0.00 0.00 0.00 4.92
2380 2506 0.666913 GCTTGCTATCCATGTGCCAG 59.333 55.000 0.00 0.00 0.00 4.85
2381 2507 1.748244 GCTTGCTATCCATGTGCCAGA 60.748 52.381 0.00 0.00 0.00 3.86
2382 2508 2.219458 CTTGCTATCCATGTGCCAGAG 58.781 52.381 0.00 0.00 0.00 3.35
2383 2509 0.179037 TGCTATCCATGTGCCAGAGC 60.179 55.000 0.00 0.00 40.48 4.09
2384 2510 0.888285 GCTATCCATGTGCCAGAGCC 60.888 60.000 0.00 0.00 38.69 4.70
2385 2511 0.471191 CTATCCATGTGCCAGAGCCA 59.529 55.000 0.00 0.00 38.69 4.75
2386 2512 1.073444 CTATCCATGTGCCAGAGCCAT 59.927 52.381 0.00 0.00 38.69 4.40
2387 2513 0.467474 ATCCATGTGCCAGAGCCATG 60.467 55.000 8.59 8.59 42.54 3.66
2388 2514 1.077285 CCATGTGCCAGAGCCATGA 60.077 57.895 14.22 0.00 44.14 3.07
2389 2515 1.101635 CCATGTGCCAGAGCCATGAG 61.102 60.000 14.22 5.17 44.14 2.90
2390 2516 0.393944 CATGTGCCAGAGCCATGAGT 60.394 55.000 0.00 0.00 44.14 3.41
2391 2517 0.330604 ATGTGCCAGAGCCATGAGTT 59.669 50.000 0.00 0.00 38.69 3.01
2392 2518 0.607217 TGTGCCAGAGCCATGAGTTG 60.607 55.000 0.00 0.00 38.69 3.16
2401 2527 3.231734 CCATGAGTTGGTTGCGAGA 57.768 52.632 0.00 0.00 40.99 4.04
2402 2528 1.742761 CCATGAGTTGGTTGCGAGAT 58.257 50.000 0.00 0.00 40.99 2.75
2403 2529 1.667724 CCATGAGTTGGTTGCGAGATC 59.332 52.381 0.00 0.00 40.99 2.75
2404 2530 2.625737 CATGAGTTGGTTGCGAGATCT 58.374 47.619 0.00 0.00 0.00 2.75
2405 2531 2.839486 TGAGTTGGTTGCGAGATCTT 57.161 45.000 0.00 0.00 0.00 2.40
2406 2532 3.953712 TGAGTTGGTTGCGAGATCTTA 57.046 42.857 0.00 0.00 0.00 2.10
2407 2533 4.471904 TGAGTTGGTTGCGAGATCTTAT 57.528 40.909 0.00 0.00 0.00 1.73
2408 2534 4.183865 TGAGTTGGTTGCGAGATCTTATG 58.816 43.478 0.00 0.00 0.00 1.90
2409 2535 3.535561 AGTTGGTTGCGAGATCTTATGG 58.464 45.455 0.00 0.00 0.00 2.74
2410 2536 2.614057 GTTGGTTGCGAGATCTTATGGG 59.386 50.000 0.00 0.00 0.00 4.00
2411 2537 1.837439 TGGTTGCGAGATCTTATGGGT 59.163 47.619 0.00 0.00 0.00 4.51
2412 2538 2.238646 TGGTTGCGAGATCTTATGGGTT 59.761 45.455 0.00 0.00 0.00 4.11
2413 2539 3.279434 GGTTGCGAGATCTTATGGGTTT 58.721 45.455 0.00 0.00 0.00 3.27
2414 2540 3.312697 GGTTGCGAGATCTTATGGGTTTC 59.687 47.826 0.00 0.00 0.00 2.78
2415 2541 3.904800 TGCGAGATCTTATGGGTTTCA 57.095 42.857 0.00 0.00 0.00 2.69
2416 2542 3.531538 TGCGAGATCTTATGGGTTTCAC 58.468 45.455 0.00 0.00 0.00 3.18
2417 2543 2.872858 GCGAGATCTTATGGGTTTCACC 59.127 50.000 0.00 0.00 37.60 4.02
2418 2544 3.432326 GCGAGATCTTATGGGTTTCACCT 60.432 47.826 0.00 0.00 38.64 4.00
2419 2545 4.372656 CGAGATCTTATGGGTTTCACCTC 58.627 47.826 0.00 0.00 38.64 3.85
2420 2546 4.100189 CGAGATCTTATGGGTTTCACCTCT 59.900 45.833 0.00 0.00 38.64 3.69
2421 2547 5.302059 CGAGATCTTATGGGTTTCACCTCTA 59.698 44.000 0.00 0.00 38.64 2.43
2422 2548 6.515862 CGAGATCTTATGGGTTTCACCTCTAG 60.516 46.154 0.00 0.00 38.64 2.43
2423 2549 4.755266 TCTTATGGGTTTCACCTCTAGC 57.245 45.455 0.00 0.00 38.64 3.42
2424 2550 3.454812 TCTTATGGGTTTCACCTCTAGCC 59.545 47.826 0.00 0.00 38.64 3.93
2425 2551 1.972588 ATGGGTTTCACCTCTAGCCT 58.027 50.000 0.00 0.00 38.64 4.58
2426 2552 2.634639 TGGGTTTCACCTCTAGCCTA 57.365 50.000 0.00 0.00 38.64 3.93
2427 2553 2.185387 TGGGTTTCACCTCTAGCCTAC 58.815 52.381 0.00 0.00 38.64 3.18
2428 2554 1.485480 GGGTTTCACCTCTAGCCTACC 59.515 57.143 0.00 0.00 38.64 3.18
2429 2555 1.485480 GGTTTCACCTCTAGCCTACCC 59.515 57.143 0.00 0.00 34.73 3.69
2430 2556 1.485480 GTTTCACCTCTAGCCTACCCC 59.515 57.143 0.00 0.00 0.00 4.95
2431 2557 0.714180 TTCACCTCTAGCCTACCCCA 59.286 55.000 0.00 0.00 0.00 4.96
2432 2558 0.714180 TCACCTCTAGCCTACCCCAA 59.286 55.000 0.00 0.00 0.00 4.12
2433 2559 0.831307 CACCTCTAGCCTACCCCAAC 59.169 60.000 0.00 0.00 0.00 3.77
2434 2560 0.717196 ACCTCTAGCCTACCCCAACT 59.283 55.000 0.00 0.00 0.00 3.16
2435 2561 1.080666 ACCTCTAGCCTACCCCAACTT 59.919 52.381 0.00 0.00 0.00 2.66
2436 2562 1.486726 CCTCTAGCCTACCCCAACTTG 59.513 57.143 0.00 0.00 0.00 3.16
2437 2563 2.188817 CTCTAGCCTACCCCAACTTGT 58.811 52.381 0.00 0.00 0.00 3.16
2438 2564 2.572104 CTCTAGCCTACCCCAACTTGTT 59.428 50.000 0.00 0.00 0.00 2.83
2439 2565 2.983898 TCTAGCCTACCCCAACTTGTTT 59.016 45.455 0.00 0.00 0.00 2.83
2440 2566 1.995376 AGCCTACCCCAACTTGTTTG 58.005 50.000 0.00 0.00 34.63 2.93
2451 2577 3.977427 CAACTTGTTTGGGACTAAAGGC 58.023 45.455 0.00 0.00 0.00 4.35
2452 2578 3.595190 ACTTGTTTGGGACTAAAGGCT 57.405 42.857 0.00 0.00 0.00 4.58
2453 2579 3.910989 ACTTGTTTGGGACTAAAGGCTT 58.089 40.909 0.00 0.00 0.00 4.35
2454 2580 4.286707 ACTTGTTTGGGACTAAAGGCTTT 58.713 39.130 17.76 17.76 0.00 3.51
2455 2581 4.099419 ACTTGTTTGGGACTAAAGGCTTTG 59.901 41.667 22.32 13.97 0.00 2.77
2456 2582 3.637769 TGTTTGGGACTAAAGGCTTTGT 58.362 40.909 22.32 16.86 0.00 2.83
2457 2583 4.027437 TGTTTGGGACTAAAGGCTTTGTT 58.973 39.130 22.32 8.73 0.00 2.83
2458 2584 4.142049 TGTTTGGGACTAAAGGCTTTGTTG 60.142 41.667 22.32 13.85 0.00 3.33
2459 2585 3.306472 TGGGACTAAAGGCTTTGTTGT 57.694 42.857 22.32 16.69 0.00 3.32
2460 2586 3.637769 TGGGACTAAAGGCTTTGTTGTT 58.362 40.909 22.32 1.84 0.00 2.83
2461 2587 3.383185 TGGGACTAAAGGCTTTGTTGTTG 59.617 43.478 22.32 7.79 0.00 3.33
2462 2588 3.383505 GGGACTAAAGGCTTTGTTGTTGT 59.616 43.478 22.32 10.58 0.00 3.32
2463 2589 4.142026 GGGACTAAAGGCTTTGTTGTTGTT 60.142 41.667 22.32 0.00 0.00 2.83
2464 2590 4.803613 GGACTAAAGGCTTTGTTGTTGTTG 59.196 41.667 22.32 0.00 0.00 3.33
2465 2591 5.400066 ACTAAAGGCTTTGTTGTTGTTGT 57.600 34.783 22.32 0.00 0.00 3.32
2466 2592 5.789521 ACTAAAGGCTTTGTTGTTGTTGTT 58.210 33.333 22.32 0.00 0.00 2.83
2467 2593 5.637387 ACTAAAGGCTTTGTTGTTGTTGTTG 59.363 36.000 22.32 0.00 0.00 3.33
2489 2615 6.436738 TGTATTGTTCTACCTTTACACCCA 57.563 37.500 0.00 0.00 0.00 4.51
2912 3038 6.160684 TCATCAGGCACATGAATTTTCTTTG 58.839 36.000 0.00 0.00 31.76 2.77
2913 3039 4.309099 TCAGGCACATGAATTTTCTTTGC 58.691 39.130 0.00 0.00 0.00 3.68
2918 3050 7.118680 CAGGCACATGAATTTTCTTTGCTATTT 59.881 33.333 0.00 0.00 0.00 1.40
2954 3086 9.685276 AGATGACAATTAACAATGACCATCTTA 57.315 29.630 0.00 0.00 37.28 2.10
2987 3119 6.985653 ATGGCACTATTAGATCACTACACT 57.014 37.500 0.00 0.00 0.00 3.55
3004 3136 8.020819 TCACTACACTTGAAACTGAAAAACTTG 58.979 33.333 0.00 0.00 0.00 3.16
3069 3201 3.136009 ACCCAAGTTTGTAGTAGTGGC 57.864 47.619 0.00 0.00 0.00 5.01
3075 3207 2.368875 AGTTTGTAGTAGTGGCACAGCT 59.631 45.455 21.41 18.26 41.80 4.24
3204 3337 2.093711 GCTGTGGTGTTTTCCTGGTTTT 60.094 45.455 0.00 0.00 0.00 2.43
3213 3346 6.183360 GGTGTTTTCCTGGTTTTTCTTCCATA 60.183 38.462 0.00 0.00 33.01 2.74
3242 3375 7.544915 GCTAGTATACCTTTGTTTTCTCGAACT 59.455 37.037 0.00 0.00 0.00 3.01
3244 3377 3.692791 ACCTTTGTTTTCTCGAACTGC 57.307 42.857 0.00 0.00 0.00 4.40
3325 3458 8.029782 ACTAATGTGGTGGTATTGATAGCTTA 57.970 34.615 0.00 0.00 0.00 3.09
3365 3498 4.700213 CCTCCGTTCCATAATTCTTGTTGT 59.300 41.667 0.00 0.00 0.00 3.32
3366 3499 5.391950 CCTCCGTTCCATAATTCTTGTTGTG 60.392 44.000 0.00 0.00 0.00 3.33
3367 3500 4.457603 TCCGTTCCATAATTCTTGTTGTGG 59.542 41.667 0.00 0.00 40.52 4.17
3368 3501 4.217550 CCGTTCCATAATTCTTGTTGTGGT 59.782 41.667 2.99 0.00 40.20 4.16
3369 3502 5.278758 CCGTTCCATAATTCTTGTTGTGGTT 60.279 40.000 2.99 0.00 40.20 3.67
3370 3503 6.212955 CGTTCCATAATTCTTGTTGTGGTTT 58.787 36.000 2.99 0.00 40.20 3.27
3371 3504 6.699642 CGTTCCATAATTCTTGTTGTGGTTTT 59.300 34.615 2.99 0.00 40.20 2.43
3372 3505 7.863375 CGTTCCATAATTCTTGTTGTGGTTTTA 59.137 33.333 2.99 0.00 40.20 1.52
3373 3506 9.191995 GTTCCATAATTCTTGTTGTGGTTTTAG 57.808 33.333 2.99 0.00 40.20 1.85
3374 3507 8.698973 TCCATAATTCTTGTTGTGGTTTTAGA 57.301 30.769 2.99 0.00 40.20 2.10
3375 3508 9.137459 TCCATAATTCTTGTTGTGGTTTTAGAA 57.863 29.630 2.99 0.00 40.20 2.10
3376 3509 9.191995 CCATAATTCTTGTTGTGGTTTTAGAAC 57.808 33.333 0.00 0.00 36.10 3.01
3377 3510 9.965824 CATAATTCTTGTTGTGGTTTTAGAACT 57.034 29.630 0.00 0.00 36.03 3.01
3398 3531 6.103222 ACTAAAACCGCGACAAGAATTATC 57.897 37.500 8.23 0.00 0.00 1.75
3407 3540 3.486108 CGACAAGAATTATCGAACGGAGG 59.514 47.826 0.00 0.00 38.10 4.30
3408 3541 3.793559 ACAAGAATTATCGAACGGAGGG 58.206 45.455 0.00 0.00 0.00 4.30
3409 3542 3.449737 ACAAGAATTATCGAACGGAGGGA 59.550 43.478 0.00 0.00 0.00 4.20
3493 3626 9.520204 CTAATCACTCACAATTTTCACTGTTTT 57.480 29.630 0.00 0.00 0.00 2.43
3705 3840 2.423538 CCTTCCTTTGCCGGTAAATGAG 59.576 50.000 18.45 14.74 0.00 2.90
3900 4067 7.062138 CGTTGCTACGGAACTACAAAATAGTTA 59.938 37.037 13.04 0.00 43.94 2.24
3932 4099 7.415095 GCATTGGATTAGCAGTATACAACAACA 60.415 37.037 5.50 0.00 29.00 3.33
3940 4107 6.003950 AGCAGTATACAACAACAAATGGACT 58.996 36.000 5.50 0.00 0.00 3.85
4089 4259 3.245229 TGGTTTGATTGAGCTGGGTGTAT 60.245 43.478 0.00 0.00 0.00 2.29
4119 4289 1.598701 GCGCTTTGAGGCTTCCCAAT 61.599 55.000 0.00 0.00 0.00 3.16
4207 4379 2.889678 GGATGAGAAAGATTGGGATGGC 59.110 50.000 0.00 0.00 0.00 4.40
4243 4415 0.178897 TCCAAACCGGGAAGGGTCTA 60.179 55.000 6.32 0.00 40.76 2.59
4262 4434 5.221541 GGTCTAGTTGGTTCTAGATGGATGG 60.222 48.000 6.70 0.00 45.08 3.51
4263 4435 3.567478 AGTTGGTTCTAGATGGATGGC 57.433 47.619 0.00 0.00 0.00 4.40
4299 4471 0.034863 TGGGGATTGAACTTACCGCC 60.035 55.000 0.00 0.00 35.06 6.13
4417 4590 4.924305 AACATGTGTCTTCAAAGCACAT 57.076 36.364 18.60 18.60 45.59 3.21
4421 4594 1.197721 GTGTCTTCAAAGCACATCGGG 59.802 52.381 10.44 0.00 35.00 5.14
4439 4612 5.538849 TCGGGCATGTATTGATGTACTAA 57.461 39.130 0.00 0.00 0.00 2.24
4445 4618 6.136071 GCATGTATTGATGTACTAAAAGGCG 58.864 40.000 0.00 0.00 0.00 5.52
4552 4725 5.554070 TCTGAAGAAGATGCTGAATGTGAA 58.446 37.500 0.00 0.00 0.00 3.18
4777 4950 5.815740 TGCGATGAAAAAGGTAATAGTCTCC 59.184 40.000 0.00 0.00 0.00 3.71
5008 5399 5.654650 TGTTAGGCCCGTGAATCAAATATTT 59.345 36.000 0.00 0.00 0.00 1.40
5032 5423 1.614903 TCTGCTGCCATTGGAACTTTG 59.385 47.619 6.95 0.00 0.00 2.77
5152 5543 6.680810 TGATCTGACACCAATTGAATTTCAC 58.319 36.000 7.12 0.00 0.00 3.18
5160 5551 6.016360 ACACCAATTGAATTTCACTTCGATCA 60.016 34.615 7.12 0.00 30.46 2.92
5223 5615 7.883229 ACTTTTGTTGTTGTAAAGTTCTTGG 57.117 32.000 0.00 0.00 38.56 3.61
5275 5667 4.484236 TGTGCAACTGTTTCTGTGAAAAG 58.516 39.130 0.00 0.00 38.04 2.27
5276 5668 4.217334 TGTGCAACTGTTTCTGTGAAAAGA 59.783 37.500 0.00 0.00 38.04 2.52
5316 5726 6.677781 ACGTTCGGATTTTAATCATGTCAT 57.322 33.333 4.97 0.00 37.15 3.06
5319 5729 6.017934 CGTTCGGATTTTAATCATGTCATCCT 60.018 38.462 4.97 0.00 37.15 3.24
5320 5730 6.866010 TCGGATTTTAATCATGTCATCCTG 57.134 37.500 4.97 0.00 37.15 3.86
5336 5747 2.302260 TCCTGAACGTTTTTCATGGCA 58.698 42.857 0.46 0.00 0.00 4.92
5337 5748 2.690497 TCCTGAACGTTTTTCATGGCAA 59.310 40.909 0.46 0.00 0.00 4.52
5338 5749 2.794350 CCTGAACGTTTTTCATGGCAAC 59.206 45.455 0.46 0.00 0.00 4.17
5339 5750 3.490761 CCTGAACGTTTTTCATGGCAACT 60.491 43.478 0.46 0.00 37.61 3.16
5340 5751 4.111916 CTGAACGTTTTTCATGGCAACTT 58.888 39.130 0.46 0.00 37.61 2.66
5341 5752 4.499183 TGAACGTTTTTCATGGCAACTTT 58.501 34.783 0.46 0.00 37.61 2.66
5342 5753 4.932200 TGAACGTTTTTCATGGCAACTTTT 59.068 33.333 0.46 0.00 37.61 2.27
5343 5754 6.100004 TGAACGTTTTTCATGGCAACTTTTA 58.900 32.000 0.46 0.00 37.61 1.52
5344 5755 6.254589 TGAACGTTTTTCATGGCAACTTTTAG 59.745 34.615 0.46 0.00 37.61 1.85
5345 5756 5.656480 ACGTTTTTCATGGCAACTTTTAGT 58.344 33.333 0.00 0.00 37.61 2.24
5346 5757 6.103330 ACGTTTTTCATGGCAACTTTTAGTT 58.897 32.000 0.00 0.00 39.39 2.24
5357 5768 4.749245 AACTTTTAGTTGATGCGAGGTG 57.251 40.909 0.00 0.00 37.00 4.00
5358 5769 3.074412 ACTTTTAGTTGATGCGAGGTGG 58.926 45.455 0.00 0.00 0.00 4.61
5359 5770 1.448985 TTTAGTTGATGCGAGGTGGC 58.551 50.000 0.00 0.00 0.00 5.01
5400 5811 1.963515 GGCAACTTTGTCCCAGTTCAT 59.036 47.619 0.00 0.00 31.83 2.57
5448 5859 0.947180 GCCAACCTCGCGTGAACTAA 60.947 55.000 10.21 0.00 0.00 2.24
5459 5870 2.225491 GCGTGAACTAAAGTTGCCATGA 59.775 45.455 0.00 0.00 38.56 3.07
5460 5871 3.304391 GCGTGAACTAAAGTTGCCATGAA 60.304 43.478 0.00 0.00 38.56 2.57
5461 5872 4.791411 GCGTGAACTAAAGTTGCCATGAAA 60.791 41.667 0.00 0.00 38.56 2.69
5462 5873 5.277825 CGTGAACTAAAGTTGCCATGAAAA 58.722 37.500 0.00 0.00 38.56 2.29
5463 5874 5.746245 CGTGAACTAAAGTTGCCATGAAAAA 59.254 36.000 0.00 0.00 38.56 1.94
5464 5875 6.291585 CGTGAACTAAAGTTGCCATGAAAAAC 60.292 38.462 0.00 0.00 38.56 2.43
5465 5876 5.746245 TGAACTAAAGTTGCCATGAAAAACG 59.254 36.000 0.00 0.00 38.56 3.60
5466 5877 5.257082 ACTAAAGTTGCCATGAAAAACGT 57.743 34.783 0.00 0.00 0.00 3.99
5467 5878 5.656480 ACTAAAGTTGCCATGAAAAACGTT 58.344 33.333 0.00 0.00 31.87 3.99
5468 5879 5.746721 ACTAAAGTTGCCATGAAAAACGTTC 59.253 36.000 0.00 0.00 30.16 3.95
5469 5880 2.726633 AGTTGCCATGAAAAACGTTCG 58.273 42.857 0.00 0.00 0.00 3.95
5470 5881 1.784283 GTTGCCATGAAAAACGTTCGG 59.216 47.619 0.00 0.00 0.00 4.30
5471 5882 1.309950 TGCCATGAAAAACGTTCGGA 58.690 45.000 0.00 0.00 0.00 4.55
5472 5883 1.883275 TGCCATGAAAAACGTTCGGAT 59.117 42.857 0.00 0.00 0.00 4.18
5473 5884 2.294791 TGCCATGAAAAACGTTCGGATT 59.705 40.909 0.00 0.00 0.00 3.01
5474 5885 2.661195 GCCATGAAAAACGTTCGGATTG 59.339 45.455 0.00 0.00 0.00 2.67
5475 5886 2.661195 CCATGAAAAACGTTCGGATTGC 59.339 45.455 0.00 0.00 0.00 3.56
5476 5887 2.409152 TGAAAAACGTTCGGATTGCC 57.591 45.000 0.00 0.00 0.00 4.52
5477 5888 1.676529 TGAAAAACGTTCGGATTGCCA 59.323 42.857 0.00 0.00 0.00 4.92
5478 5889 2.294791 TGAAAAACGTTCGGATTGCCAT 59.705 40.909 0.00 0.00 0.00 4.40
5479 5890 2.346099 AAAACGTTCGGATTGCCATG 57.654 45.000 0.00 0.00 0.00 3.66
5490 5901 3.383761 GGATTGCCATGCTTAAAATCCG 58.616 45.455 0.00 0.00 37.58 4.18
5494 5905 2.159448 TGCCATGCTTAAAATCCGAACG 60.159 45.455 0.00 0.00 0.00 3.95
5522 5933 8.688151 TCGGGATTTATCATTTCCGTAATTTTT 58.312 29.630 0.00 0.00 38.70 1.94
5667 6078 4.097589 GGGGAAGAGAAAAATGATCTGCTG 59.902 45.833 0.00 0.00 0.00 4.41
5704 6115 4.141914 CCCTAACACCAGAGAAGGTATGTC 60.142 50.000 0.00 0.00 40.77 3.06
5705 6116 4.712337 CCTAACACCAGAGAAGGTATGTCT 59.288 45.833 0.00 0.00 40.77 3.41
5758 6169 3.430473 TGGTACAAACCCCAAGCAG 57.570 52.632 0.00 0.00 46.16 4.24
5769 6180 2.439135 ACCCCAAGCAGCAAAGAAAATT 59.561 40.909 0.00 0.00 0.00 1.82
5781 6192 6.927381 CAGCAAAGAAAATTCAGAGATTGGTT 59.073 34.615 0.00 0.00 0.00 3.67
5811 6227 1.639722 TTACAGTGGCCTGACTAGCA 58.360 50.000 3.32 0.00 41.50 3.49
5815 6231 1.550524 CAGTGGCCTGACTAGCAGTTA 59.449 52.381 3.32 0.00 43.33 2.24
6129 6550 0.529378 GCCTTTCTGTTCATGGCCAG 59.471 55.000 13.05 3.43 37.81 4.85
6132 6553 2.029649 CCTTTCTGTTCATGGCCAGTTG 60.030 50.000 13.05 5.64 0.00 3.16
6376 6797 0.826062 GGGGCATTTCCTGACAATGG 59.174 55.000 0.00 0.00 32.82 3.16
6577 6999 3.118738 GGATACTGGGTATTAGGCATCCG 60.119 52.174 0.00 0.00 0.00 4.18
6715 7137 2.726821 TGGATGGTTCTTGATGAAGGC 58.273 47.619 0.00 0.00 35.01 4.35
6769 7192 5.578005 TGTACTCCTTCGTTCCATCTTAG 57.422 43.478 0.00 0.00 0.00 2.18
6849 7406 3.978217 GCTCGAACAGATGTATCTAGCAC 59.022 47.826 8.12 0.00 34.96 4.40
6872 7429 9.056005 GCACTGAAATATGTTTAGATACATCCA 57.944 33.333 0.00 0.00 39.39 3.41
6891 7448 8.218338 ACATCCATCTGAACAGAATATGAAAC 57.782 34.615 20.45 0.00 41.36 2.78
7104 7849 4.271776 GCAGAAGCAAAAGCTCAAACAAAT 59.728 37.500 0.00 0.00 41.58 2.32
7141 7886 6.316640 GCATCTCTAGCAGACTCCGTATAATA 59.683 42.308 0.00 0.00 32.26 0.98
7170 7915 3.366422 CCCGCAAAATAACCGTCAAAATG 59.634 43.478 0.00 0.00 0.00 2.32
7211 7957 3.758300 CTGCCCAATCGACAATGTAAAC 58.242 45.455 0.00 0.00 0.00 2.01
7213 7959 2.160813 GCCCAATCGACAATGTAAACGT 59.839 45.455 0.00 0.00 0.00 3.99
7215 7961 3.187637 CCCAATCGACAATGTAAACGTGT 59.812 43.478 0.00 0.00 0.00 4.49
7218 7964 2.480848 CGACAATGTAAACGTGTCGG 57.519 50.000 21.90 10.39 45.61 4.79
7266 8012 1.064825 AAATCTCACCTCCAACCCGT 58.935 50.000 0.00 0.00 0.00 5.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 9.439500 CCCATTTTAGACATTTGATTTTGTCAT 57.561 29.630 5.91 0.00 43.72 3.06
10 11 8.428063 ACCCATTTTAGACATTTGATTTTGTCA 58.572 29.630 5.91 0.00 43.72 3.58
11 12 8.831715 ACCCATTTTAGACATTTGATTTTGTC 57.168 30.769 0.00 0.00 42.03 3.18
12 13 8.428063 TGACCCATTTTAGACATTTGATTTTGT 58.572 29.630 0.00 0.00 0.00 2.83
13 14 8.830201 TGACCCATTTTAGACATTTGATTTTG 57.170 30.769 0.00 0.00 0.00 2.44
14 15 9.657419 GATGACCCATTTTAGACATTTGATTTT 57.343 29.630 0.00 0.00 0.00 1.82
15 16 9.039165 AGATGACCCATTTTAGACATTTGATTT 57.961 29.630 0.00 0.00 0.00 2.17
16 17 8.599624 AGATGACCCATTTTAGACATTTGATT 57.400 30.769 0.00 0.00 0.00 2.57
17 18 8.057623 AGAGATGACCCATTTTAGACATTTGAT 58.942 33.333 0.00 0.00 0.00 2.57
18 19 7.405292 AGAGATGACCCATTTTAGACATTTGA 58.595 34.615 0.00 0.00 0.00 2.69
19 20 7.636150 AGAGATGACCCATTTTAGACATTTG 57.364 36.000 0.00 0.00 0.00 2.32
20 21 9.401058 CTAAGAGATGACCCATTTTAGACATTT 57.599 33.333 0.00 0.00 0.00 2.32
21 22 7.995488 CCTAAGAGATGACCCATTTTAGACATT 59.005 37.037 0.00 0.00 0.00 2.71
22 23 7.127955 ACCTAAGAGATGACCCATTTTAGACAT 59.872 37.037 0.00 0.00 0.00 3.06
23 24 6.443849 ACCTAAGAGATGACCCATTTTAGACA 59.556 38.462 0.00 0.00 0.00 3.41
24 25 6.890293 ACCTAAGAGATGACCCATTTTAGAC 58.110 40.000 0.00 0.00 0.00 2.59
25 26 7.510675 AACCTAAGAGATGACCCATTTTAGA 57.489 36.000 0.00 0.00 0.00 2.10
26 27 9.853177 ATAAACCTAAGAGATGACCCATTTTAG 57.147 33.333 0.00 0.00 0.00 1.85
27 28 9.847224 GATAAACCTAAGAGATGACCCATTTTA 57.153 33.333 0.00 0.00 0.00 1.52
28 29 8.560903 AGATAAACCTAAGAGATGACCCATTTT 58.439 33.333 0.00 0.00 0.00 1.82
29 30 8.107196 AGATAAACCTAAGAGATGACCCATTT 57.893 34.615 0.00 0.00 0.00 2.32
30 31 7.698163 AGATAAACCTAAGAGATGACCCATT 57.302 36.000 0.00 0.00 0.00 3.16
31 32 7.348274 TGAAGATAAACCTAAGAGATGACCCAT 59.652 37.037 0.00 0.00 0.00 4.00
32 33 6.672218 TGAAGATAAACCTAAGAGATGACCCA 59.328 38.462 0.00 0.00 0.00 4.51
33 34 7.125792 TGAAGATAAACCTAAGAGATGACCC 57.874 40.000 0.00 0.00 0.00 4.46
42 43 9.832445 TGGCTAGTTATTGAAGATAAACCTAAG 57.168 33.333 0.00 0.00 0.00 2.18
45 46 9.700831 AAATGGCTAGTTATTGAAGATAAACCT 57.299 29.630 0.00 0.00 0.00 3.50
46 47 9.952188 GAAATGGCTAGTTATTGAAGATAAACC 57.048 33.333 0.00 0.00 0.00 3.27
54 55 9.834628 CGTTTTTAGAAATGGCTAGTTATTGAA 57.165 29.630 0.00 0.00 0.00 2.69
55 56 9.005777 ACGTTTTTAGAAATGGCTAGTTATTGA 57.994 29.630 3.28 0.00 36.33 2.57
56 57 9.061610 CACGTTTTTAGAAATGGCTAGTTATTG 57.938 33.333 3.28 0.00 36.33 1.90
57 58 8.241367 CCACGTTTTTAGAAATGGCTAGTTATT 58.759 33.333 3.28 0.00 36.33 1.40
58 59 7.392393 ACCACGTTTTTAGAAATGGCTAGTTAT 59.608 33.333 3.28 0.00 36.33 1.89
59 60 6.711645 ACCACGTTTTTAGAAATGGCTAGTTA 59.288 34.615 3.28 0.00 36.33 2.24
60 61 5.533528 ACCACGTTTTTAGAAATGGCTAGTT 59.466 36.000 3.28 0.00 36.33 2.24
61 62 5.048991 CACCACGTTTTTAGAAATGGCTAGT 60.049 40.000 3.28 0.00 36.33 2.57
62 63 5.180492 TCACCACGTTTTTAGAAATGGCTAG 59.820 40.000 3.28 0.00 36.33 3.42
63 64 5.064558 TCACCACGTTTTTAGAAATGGCTA 58.935 37.500 3.28 0.00 36.33 3.93
64 65 3.886505 TCACCACGTTTTTAGAAATGGCT 59.113 39.130 3.28 0.00 36.33 4.75
65 66 4.023536 TCTCACCACGTTTTTAGAAATGGC 60.024 41.667 3.28 0.00 36.33 4.40
66 67 5.008217 TGTCTCACCACGTTTTTAGAAATGG 59.992 40.000 3.28 0.75 36.33 3.16
67 68 6.055231 TGTCTCACCACGTTTTTAGAAATG 57.945 37.500 0.00 0.00 37.69 2.32
68 69 6.877611 ATGTCTCACCACGTTTTTAGAAAT 57.122 33.333 0.00 0.00 0.00 2.17
69 70 7.972832 ATATGTCTCACCACGTTTTTAGAAA 57.027 32.000 0.00 0.00 0.00 2.52
70 71 7.442969 ACAATATGTCTCACCACGTTTTTAGAA 59.557 33.333 0.00 0.00 0.00 2.10
71 72 6.932400 ACAATATGTCTCACCACGTTTTTAGA 59.068 34.615 0.00 0.00 0.00 2.10
72 73 7.015289 CACAATATGTCTCACCACGTTTTTAG 58.985 38.462 0.00 0.00 0.00 1.85
73 74 6.566942 GCACAATATGTCTCACCACGTTTTTA 60.567 38.462 0.00 0.00 0.00 1.52
74 75 5.757886 CACAATATGTCTCACCACGTTTTT 58.242 37.500 0.00 0.00 0.00 1.94
75 76 4.320202 GCACAATATGTCTCACCACGTTTT 60.320 41.667 0.00 0.00 0.00 2.43
76 77 3.188460 GCACAATATGTCTCACCACGTTT 59.812 43.478 0.00 0.00 0.00 3.60
77 78 2.742053 GCACAATATGTCTCACCACGTT 59.258 45.455 0.00 0.00 0.00 3.99
78 79 2.028112 AGCACAATATGTCTCACCACGT 60.028 45.455 0.00 0.00 0.00 4.49
79 80 2.621338 AGCACAATATGTCTCACCACG 58.379 47.619 0.00 0.00 0.00 4.94
80 81 3.557595 GCTAGCACAATATGTCTCACCAC 59.442 47.826 10.63 0.00 0.00 4.16
81 82 3.737972 CGCTAGCACAATATGTCTCACCA 60.738 47.826 16.45 0.00 0.00 4.17
82 83 2.797156 CGCTAGCACAATATGTCTCACC 59.203 50.000 16.45 0.00 0.00 4.02
83 84 3.706698 TCGCTAGCACAATATGTCTCAC 58.293 45.455 16.45 0.00 0.00 3.51
84 85 4.037923 TGATCGCTAGCACAATATGTCTCA 59.962 41.667 16.45 2.25 0.00 3.27
85 86 4.550422 TGATCGCTAGCACAATATGTCTC 58.450 43.478 16.45 0.00 0.00 3.36
86 87 4.590850 TGATCGCTAGCACAATATGTCT 57.409 40.909 16.45 0.00 0.00 3.41
87 88 5.167121 AGATGATCGCTAGCACAATATGTC 58.833 41.667 16.45 5.90 0.00 3.06
88 89 5.047448 AGAGATGATCGCTAGCACAATATGT 60.047 40.000 16.45 0.58 0.00 2.29
89 90 5.409211 AGAGATGATCGCTAGCACAATATG 58.591 41.667 16.45 0.00 0.00 1.78
90 91 5.657826 AGAGATGATCGCTAGCACAATAT 57.342 39.130 16.45 1.84 0.00 1.28
91 92 5.221322 ACAAGAGATGATCGCTAGCACAATA 60.221 40.000 16.45 0.00 0.00 1.90
92 93 4.056740 CAAGAGATGATCGCTAGCACAAT 58.943 43.478 16.45 4.68 0.00 2.71
93 94 3.118992 ACAAGAGATGATCGCTAGCACAA 60.119 43.478 16.45 0.00 0.00 3.33
94 95 2.428530 ACAAGAGATGATCGCTAGCACA 59.571 45.455 16.45 11.76 0.00 4.57
95 96 3.049206 GACAAGAGATGATCGCTAGCAC 58.951 50.000 16.45 6.08 0.00 4.40
96 97 2.954989 AGACAAGAGATGATCGCTAGCA 59.045 45.455 16.45 2.17 0.00 3.49
97 98 3.641437 AGACAAGAGATGATCGCTAGC 57.359 47.619 4.06 4.06 0.00 3.42
98 99 5.239306 AGAGAAGACAAGAGATGATCGCTAG 59.761 44.000 0.00 0.00 0.00 3.42
99 100 5.129634 AGAGAAGACAAGAGATGATCGCTA 58.870 41.667 0.00 0.00 0.00 4.26
100 101 3.953612 AGAGAAGACAAGAGATGATCGCT 59.046 43.478 0.00 0.00 0.00 4.93
101 102 4.305989 AGAGAAGACAAGAGATGATCGC 57.694 45.455 0.00 0.00 0.00 4.58
102 103 8.870160 ATTTAAGAGAAGACAAGAGATGATCG 57.130 34.615 0.00 0.00 0.00 3.69
127 128 9.671279 TCATAAGAAAATGCATGTCTTCTCTTA 57.329 29.630 22.68 16.43 33.70 2.10
128 129 8.571461 TCATAAGAAAATGCATGTCTTCTCTT 57.429 30.769 22.68 15.07 33.70 2.85
129 130 7.828223 ACTCATAAGAAAATGCATGTCTTCTCT 59.172 33.333 22.68 6.15 33.70 3.10
130 131 7.909121 CACTCATAAGAAAATGCATGTCTTCTC 59.091 37.037 22.68 4.03 33.70 2.87
131 132 7.627939 GCACTCATAAGAAAATGCATGTCTTCT 60.628 37.037 22.68 17.07 33.70 2.85
132 133 6.471519 GCACTCATAAGAAAATGCATGTCTTC 59.528 38.462 22.68 15.47 33.70 2.87
133 134 6.152323 AGCACTCATAAGAAAATGCATGTCTT 59.848 34.615 22.64 22.64 35.51 3.01
134 135 5.651139 AGCACTCATAAGAAAATGCATGTCT 59.349 36.000 0.00 3.35 35.51 3.41
135 136 5.888105 AGCACTCATAAGAAAATGCATGTC 58.112 37.500 0.00 0.58 35.51 3.06
136 137 5.651139 AGAGCACTCATAAGAAAATGCATGT 59.349 36.000 0.00 0.00 35.51 3.21
137 138 6.038382 AGAGAGCACTCATAAGAAAATGCATG 59.962 38.462 13.86 0.00 44.79 4.06
138 139 6.120905 AGAGAGCACTCATAAGAAAATGCAT 58.879 36.000 13.86 0.00 44.79 3.96
139 140 5.494724 AGAGAGCACTCATAAGAAAATGCA 58.505 37.500 13.86 0.00 44.79 3.96
140 141 5.007528 GGAGAGAGCACTCATAAGAAAATGC 59.992 44.000 13.86 0.00 44.79 3.56
141 142 6.347696 AGGAGAGAGCACTCATAAGAAAATG 58.652 40.000 13.86 0.00 44.79 2.32
142 143 6.383726 AGAGGAGAGAGCACTCATAAGAAAAT 59.616 38.462 13.86 0.00 44.79 1.82
143 144 5.719085 AGAGGAGAGAGCACTCATAAGAAAA 59.281 40.000 13.86 0.00 44.79 2.29
144 145 5.268387 AGAGGAGAGAGCACTCATAAGAAA 58.732 41.667 13.86 0.00 44.79 2.52
145 146 4.865905 AGAGGAGAGAGCACTCATAAGAA 58.134 43.478 13.86 0.00 44.79 2.52
146 147 4.518278 AGAGGAGAGAGCACTCATAAGA 57.482 45.455 13.86 0.00 44.79 2.10
147 148 4.518970 GGTAGAGGAGAGAGCACTCATAAG 59.481 50.000 13.86 0.00 44.79 1.73
148 149 4.465886 GGTAGAGGAGAGAGCACTCATAA 58.534 47.826 13.86 0.00 44.79 1.90
149 150 3.495276 CGGTAGAGGAGAGAGCACTCATA 60.495 52.174 13.86 0.00 44.79 2.15
150 151 2.748132 CGGTAGAGGAGAGAGCACTCAT 60.748 54.545 13.86 3.31 44.79 2.90
151 152 1.407575 CGGTAGAGGAGAGAGCACTCA 60.408 57.143 13.86 0.00 44.79 3.41
152 153 1.305201 CGGTAGAGGAGAGAGCACTC 58.695 60.000 2.51 2.51 42.90 3.51
153 154 0.750182 GCGGTAGAGGAGAGAGCACT 60.750 60.000 0.00 0.00 0.00 4.40
154 155 1.032657 TGCGGTAGAGGAGAGAGCAC 61.033 60.000 0.00 0.00 0.00 4.40
155 156 0.106469 ATGCGGTAGAGGAGAGAGCA 60.106 55.000 0.00 0.00 37.54 4.26
156 157 0.596082 GATGCGGTAGAGGAGAGAGC 59.404 60.000 0.00 0.00 0.00 4.09
157 158 1.974265 TGATGCGGTAGAGGAGAGAG 58.026 55.000 0.00 0.00 0.00 3.20
158 159 2.666272 ATGATGCGGTAGAGGAGAGA 57.334 50.000 0.00 0.00 0.00 3.10
159 160 3.742433 AAATGATGCGGTAGAGGAGAG 57.258 47.619 0.00 0.00 0.00 3.20
160 161 4.220821 GGATAAATGATGCGGTAGAGGAGA 59.779 45.833 0.00 0.00 0.00 3.71
161 162 4.221703 AGGATAAATGATGCGGTAGAGGAG 59.778 45.833 0.00 0.00 0.00 3.69
162 163 4.160329 AGGATAAATGATGCGGTAGAGGA 58.840 43.478 0.00 0.00 0.00 3.71
163 164 4.543590 AGGATAAATGATGCGGTAGAGG 57.456 45.455 0.00 0.00 0.00 3.69
164 165 5.096169 CGTAGGATAAATGATGCGGTAGAG 58.904 45.833 0.00 0.00 0.00 2.43
165 166 4.521639 ACGTAGGATAAATGATGCGGTAGA 59.478 41.667 0.00 0.00 0.00 2.59
166 167 4.621460 CACGTAGGATAAATGATGCGGTAG 59.379 45.833 0.00 0.00 0.00 3.18
167 168 4.552355 CACGTAGGATAAATGATGCGGTA 58.448 43.478 0.00 0.00 0.00 4.02
168 169 3.390135 CACGTAGGATAAATGATGCGGT 58.610 45.455 0.00 0.00 0.00 5.68
169 170 2.736721 CCACGTAGGATAAATGATGCGG 59.263 50.000 0.00 0.00 41.22 5.69
170 171 2.157668 GCCACGTAGGATAAATGATGCG 59.842 50.000 8.04 0.00 41.22 4.73
171 172 3.058914 GTGCCACGTAGGATAAATGATGC 60.059 47.826 8.04 0.00 41.22 3.91
172 173 4.380531 AGTGCCACGTAGGATAAATGATG 58.619 43.478 8.04 0.00 41.22 3.07
173 174 4.689612 AGTGCCACGTAGGATAAATGAT 57.310 40.909 8.04 0.00 41.22 2.45
174 175 4.481368 AAGTGCCACGTAGGATAAATGA 57.519 40.909 8.04 0.00 41.22 2.57
175 176 5.560966 AAAAGTGCCACGTAGGATAAATG 57.439 39.130 8.04 0.00 41.22 2.32
176 177 7.107542 TCTTAAAAGTGCCACGTAGGATAAAT 58.892 34.615 8.04 0.00 41.22 1.40
177 178 6.465948 TCTTAAAAGTGCCACGTAGGATAAA 58.534 36.000 8.04 0.00 41.22 1.40
178 179 6.040209 TCTTAAAAGTGCCACGTAGGATAA 57.960 37.500 8.04 0.00 41.22 1.75
179 180 5.664294 TCTTAAAAGTGCCACGTAGGATA 57.336 39.130 8.04 0.00 41.22 2.59
180 181 4.546829 TCTTAAAAGTGCCACGTAGGAT 57.453 40.909 8.04 0.00 41.22 3.24
181 182 4.546829 ATCTTAAAAGTGCCACGTAGGA 57.453 40.909 8.04 0.00 41.22 2.94
182 183 4.270325 GCTATCTTAAAAGTGCCACGTAGG 59.730 45.833 0.00 0.00 41.84 3.18
183 184 4.868171 TGCTATCTTAAAAGTGCCACGTAG 59.132 41.667 0.00 0.00 0.00 3.51
184 185 4.628333 GTGCTATCTTAAAAGTGCCACGTA 59.372 41.667 0.00 0.00 0.00 3.57
185 186 3.435671 GTGCTATCTTAAAAGTGCCACGT 59.564 43.478 0.00 0.00 0.00 4.49
186 187 3.181510 GGTGCTATCTTAAAAGTGCCACG 60.182 47.826 0.00 0.00 0.00 4.94
187 188 3.756434 TGGTGCTATCTTAAAAGTGCCAC 59.244 43.478 0.00 0.00 0.00 5.01
188 189 4.027674 TGGTGCTATCTTAAAAGTGCCA 57.972 40.909 0.00 0.00 0.00 4.92
189 190 5.105756 ACAATGGTGCTATCTTAAAAGTGCC 60.106 40.000 0.00 0.00 0.00 5.01
190 191 5.954335 ACAATGGTGCTATCTTAAAAGTGC 58.046 37.500 0.00 0.00 0.00 4.40
191 192 8.039603 TGTACAATGGTGCTATCTTAAAAGTG 57.960 34.615 0.00 0.00 0.00 3.16
192 193 8.677300 CATGTACAATGGTGCTATCTTAAAAGT 58.323 33.333 0.00 0.00 0.00 2.66
193 194 7.645340 GCATGTACAATGGTGCTATCTTAAAAG 59.355 37.037 11.12 0.00 34.85 2.27
194 195 7.416213 GGCATGTACAATGGTGCTATCTTAAAA 60.416 37.037 16.47 0.00 37.70 1.52
195 196 6.039270 GGCATGTACAATGGTGCTATCTTAAA 59.961 38.462 16.47 0.00 37.70 1.52
196 197 5.530915 GGCATGTACAATGGTGCTATCTTAA 59.469 40.000 16.47 0.00 37.70 1.85
197 198 5.063204 GGCATGTACAATGGTGCTATCTTA 58.937 41.667 16.47 0.00 37.70 2.10
198 199 3.885297 GGCATGTACAATGGTGCTATCTT 59.115 43.478 16.47 0.00 37.70 2.40
199 200 3.480470 GGCATGTACAATGGTGCTATCT 58.520 45.455 16.47 0.00 37.70 1.98
200 201 2.554032 GGGCATGTACAATGGTGCTATC 59.446 50.000 16.47 3.12 37.70 2.08
201 202 2.175499 AGGGCATGTACAATGGTGCTAT 59.825 45.455 16.47 5.35 37.70 2.97
202 203 1.563879 AGGGCATGTACAATGGTGCTA 59.436 47.619 16.47 0.00 37.70 3.49
203 204 0.332632 AGGGCATGTACAATGGTGCT 59.667 50.000 16.47 0.00 37.70 4.40
204 205 1.185315 AAGGGCATGTACAATGGTGC 58.815 50.000 10.12 10.12 36.88 5.01
205 206 4.704540 TCTTTAAGGGCATGTACAATGGTG 59.295 41.667 0.00 0.00 0.00 4.17
206 207 4.929479 TCTTTAAGGGCATGTACAATGGT 58.071 39.130 0.00 0.00 0.00 3.55
207 208 5.360714 ACATCTTTAAGGGCATGTACAATGG 59.639 40.000 0.00 0.00 0.00 3.16
208 209 6.455360 ACATCTTTAAGGGCATGTACAATG 57.545 37.500 0.00 0.12 0.00 2.82
209 210 8.766994 ATAACATCTTTAAGGGCATGTACAAT 57.233 30.769 0.00 0.00 0.00 2.71
210 211 9.116067 GTATAACATCTTTAAGGGCATGTACAA 57.884 33.333 0.00 0.00 0.00 2.41
211 212 8.491134 AGTATAACATCTTTAAGGGCATGTACA 58.509 33.333 0.00 0.00 0.00 2.90
212 213 8.904099 AGTATAACATCTTTAAGGGCATGTAC 57.096 34.615 0.00 0.00 0.00 2.90
213 214 9.914834 AAAGTATAACATCTTTAAGGGCATGTA 57.085 29.630 0.00 0.00 33.00 2.29
214 215 8.823220 AAAGTATAACATCTTTAAGGGCATGT 57.177 30.769 0.00 0.00 33.00 3.21
218 219 9.731819 GCTAAAAAGTATAACATCTTTAAGGGC 57.268 33.333 0.00 0.00 34.14 5.19
255 256 8.087750 GTGGATCATGAAAACATTGACCTTTTA 58.912 33.333 0.00 0.00 0.00 1.52
261 262 4.381932 GGGGTGGATCATGAAAACATTGAC 60.382 45.833 0.00 0.00 0.00 3.18
266 267 2.896685 GTTGGGGTGGATCATGAAAACA 59.103 45.455 0.00 0.00 0.00 2.83
267 268 2.896685 TGTTGGGGTGGATCATGAAAAC 59.103 45.455 0.00 0.00 0.00 2.43
295 296 3.687125 TGTTGGTAAACTGTGTGTTCCA 58.313 40.909 0.00 0.00 38.03 3.53
407 410 4.409570 GAACTGACGTCGTGATAGCTAAA 58.590 43.478 11.62 0.00 0.00 1.85
431 434 2.063266 GTTCACTATGCGTCGGAAACA 58.937 47.619 0.00 0.00 0.00 2.83
438 441 2.683968 TCTTGTGGTTCACTATGCGTC 58.316 47.619 0.00 0.00 35.11 5.19
473 477 5.704354 TCAACCTGGCATGGATATACAAAT 58.296 37.500 9.53 0.00 0.00 2.32
507 515 5.123820 CCGACATGACTTGTGGAAAATACAT 59.876 40.000 0.00 0.00 39.18 2.29
537 545 0.809241 GCCGGAGATGCTGAACTCTG 60.809 60.000 5.05 0.00 38.71 3.35
543 551 0.964700 CTCTATGCCGGAGATGCTGA 59.035 55.000 5.05 0.00 33.03 4.26
587 595 1.528309 CTTCCCTTGGCACGGTTGT 60.528 57.895 9.38 0.00 0.00 3.32
619 628 0.874390 GTCATGCGCTTCTTGGACAA 59.126 50.000 9.73 0.00 0.00 3.18
632 641 3.476295 ACATCGTTTGTCATGTCATGC 57.524 42.857 8.03 4.35 30.89 4.06
657 666 0.537653 TGGAACGGAATATGCGTCCA 59.462 50.000 9.94 9.94 45.62 4.02
658 667 0.935196 GTGGAACGGAATATGCGTCC 59.065 55.000 0.00 2.28 45.62 4.79
817 877 4.083271 CCGCTCGAAAAAGAGAAAAGGAAT 60.083 41.667 0.00 0.00 40.57 3.01
1267 1352 3.132824 CCAGACTATTCAATTTTGGGGGC 59.867 47.826 0.00 0.00 0.00 5.80
1310 1400 9.315363 ACCAAACAGTTCCCATAATAATAAACA 57.685 29.630 0.00 0.00 0.00 2.83
1454 1554 7.203910 ACGACCTCATCTTATTCACAAGTATC 58.796 38.462 0.00 0.00 0.00 2.24
1477 1577 5.371115 ACACCAATTTTCAGATGGTAACG 57.629 39.130 0.00 0.00 45.45 3.18
1506 1609 1.197721 CACCGGTTTCAAGCATCTCAC 59.802 52.381 2.97 0.00 0.00 3.51
1568 1671 0.177604 TGGCAGCAACAAAAAGTGGG 59.822 50.000 0.00 0.00 0.00 4.61
1612 1715 6.687105 CGGATTATTTGAATTGTCCGTTTCTC 59.313 38.462 15.47 0.00 38.40 2.87
1618 1721 5.064707 ACACTCGGATTATTTGAATTGTCCG 59.935 40.000 16.69 16.69 41.52 4.79
1636 1741 0.583438 CCACACTTGCAGAACACTCG 59.417 55.000 0.00 0.00 0.00 4.18
1651 1756 3.222173 ACTTCATTACTTGTGCCCACA 57.778 42.857 0.00 0.00 39.98 4.17
1681 1786 3.139077 GGGCAAGGGACATTAGAATACG 58.861 50.000 0.00 0.00 0.00 3.06
1695 1800 2.438434 GGATGACGGTGGGCAAGG 60.438 66.667 0.00 0.00 0.00 3.61
1742 1847 1.408340 CTGAGGATGACGATGAGCAGT 59.592 52.381 0.00 0.00 0.00 4.40
1779 1884 0.462581 TAGCAAGAGCATGGCTTCCG 60.463 55.000 0.00 0.00 45.49 4.30
1785 1891 4.260170 ACTCTCTTTTAGCAAGAGCATGG 58.740 43.478 7.29 2.00 45.49 3.66
1893 2006 3.760738 TGCATACAACTCAAACCCATCA 58.239 40.909 0.00 0.00 0.00 3.07
2100 2226 9.734984 TCTCGTATATCATCAGGTAGAACAATA 57.265 33.333 0.00 0.00 0.00 1.90
2101 2227 8.637196 TCTCGTATATCATCAGGTAGAACAAT 57.363 34.615 0.00 0.00 0.00 2.71
2102 2228 8.637196 ATCTCGTATATCATCAGGTAGAACAA 57.363 34.615 0.00 0.00 0.00 2.83
2103 2229 9.384764 CTATCTCGTATATCATCAGGTAGAACA 57.615 37.037 0.00 0.00 0.00 3.18
2104 2230 9.602568 TCTATCTCGTATATCATCAGGTAGAAC 57.397 37.037 0.00 0.00 0.00 3.01
2105 2231 9.825109 CTCTATCTCGTATATCATCAGGTAGAA 57.175 37.037 0.00 0.00 0.00 2.10
2106 2232 8.983789 ACTCTATCTCGTATATCATCAGGTAGA 58.016 37.037 0.00 0.00 0.00 2.59
2107 2233 9.607988 AACTCTATCTCGTATATCATCAGGTAG 57.392 37.037 0.00 0.00 0.00 3.18
2108 2234 9.384764 CAACTCTATCTCGTATATCATCAGGTA 57.615 37.037 0.00 0.00 0.00 3.08
2109 2235 7.338196 CCAACTCTATCTCGTATATCATCAGGT 59.662 40.741 0.00 0.00 0.00 4.00
2110 2236 7.201776 CCCAACTCTATCTCGTATATCATCAGG 60.202 44.444 0.00 0.00 0.00 3.86
2111 2237 7.201776 CCCCAACTCTATCTCGTATATCATCAG 60.202 44.444 0.00 0.00 0.00 2.90
2112 2238 6.603599 CCCCAACTCTATCTCGTATATCATCA 59.396 42.308 0.00 0.00 0.00 3.07
2113 2239 6.603997 ACCCCAACTCTATCTCGTATATCATC 59.396 42.308 0.00 0.00 0.00 2.92
2114 2240 6.494952 ACCCCAACTCTATCTCGTATATCAT 58.505 40.000 0.00 0.00 0.00 2.45
2115 2241 5.888901 ACCCCAACTCTATCTCGTATATCA 58.111 41.667 0.00 0.00 0.00 2.15
2116 2242 6.038492 GCTACCCCAACTCTATCTCGTATATC 59.962 46.154 0.00 0.00 0.00 1.63
2117 2243 5.887035 GCTACCCCAACTCTATCTCGTATAT 59.113 44.000 0.00 0.00 0.00 0.86
2118 2244 5.221986 TGCTACCCCAACTCTATCTCGTATA 60.222 44.000 0.00 0.00 0.00 1.47
2119 2245 4.080687 GCTACCCCAACTCTATCTCGTAT 58.919 47.826 0.00 0.00 0.00 3.06
2120 2246 3.117776 TGCTACCCCAACTCTATCTCGTA 60.118 47.826 0.00 0.00 0.00 3.43
2121 2247 2.308690 GCTACCCCAACTCTATCTCGT 58.691 52.381 0.00 0.00 0.00 4.18
2122 2248 2.034812 GTGCTACCCCAACTCTATCTCG 59.965 54.545 0.00 0.00 0.00 4.04
2123 2249 2.365941 GGTGCTACCCCAACTCTATCTC 59.634 54.545 0.00 0.00 30.04 2.75
2124 2250 2.292918 TGGTGCTACCCCAACTCTATCT 60.293 50.000 3.33 0.00 37.50 1.98
2125 2251 2.116238 TGGTGCTACCCCAACTCTATC 58.884 52.381 3.33 0.00 37.50 2.08
2126 2252 2.263895 TGGTGCTACCCCAACTCTAT 57.736 50.000 3.33 0.00 37.50 1.98
2127 2253 2.032965 TTGGTGCTACCCCAACTCTA 57.967 50.000 3.33 0.00 37.50 2.43
2128 2254 1.372501 ATTGGTGCTACCCCAACTCT 58.627 50.000 0.00 0.00 44.36 3.24
2129 2255 1.818674 CAATTGGTGCTACCCCAACTC 59.181 52.381 0.00 0.00 44.36 3.01
2130 2256 1.427368 TCAATTGGTGCTACCCCAACT 59.573 47.619 5.42 0.00 44.36 3.16
2131 2257 1.818674 CTCAATTGGTGCTACCCCAAC 59.181 52.381 5.42 0.00 44.36 3.77
2132 2258 1.272425 CCTCAATTGGTGCTACCCCAA 60.272 52.381 5.42 0.00 45.55 4.12
2133 2259 0.331278 CCTCAATTGGTGCTACCCCA 59.669 55.000 5.42 0.00 37.50 4.96
2134 2260 0.623723 TCCTCAATTGGTGCTACCCC 59.376 55.000 5.42 0.00 37.50 4.95
2135 2261 1.559682 TCTCCTCAATTGGTGCTACCC 59.440 52.381 5.42 0.00 37.50 3.69
2136 2262 3.274288 CTTCTCCTCAATTGGTGCTACC 58.726 50.000 5.42 0.00 39.22 3.18
2137 2263 2.680339 GCTTCTCCTCAATTGGTGCTAC 59.320 50.000 5.42 0.00 0.00 3.58
2138 2264 2.573462 AGCTTCTCCTCAATTGGTGCTA 59.427 45.455 5.42 0.00 0.00 3.49
2139 2265 1.353694 AGCTTCTCCTCAATTGGTGCT 59.646 47.619 5.42 2.81 0.00 4.40
2140 2266 1.831580 AGCTTCTCCTCAATTGGTGC 58.168 50.000 5.42 0.62 0.00 5.01
2141 2267 3.152341 ACAAGCTTCTCCTCAATTGGTG 58.848 45.455 5.42 0.00 0.00 4.17
2142 2268 3.416156 GACAAGCTTCTCCTCAATTGGT 58.584 45.455 5.42 0.00 0.00 3.67
2143 2269 2.751806 GGACAAGCTTCTCCTCAATTGG 59.248 50.000 13.12 0.00 0.00 3.16
2144 2270 3.415212 TGGACAAGCTTCTCCTCAATTG 58.585 45.455 19.96 0.00 0.00 2.32
2145 2271 3.795688 TGGACAAGCTTCTCCTCAATT 57.204 42.857 19.96 0.00 0.00 2.32
2146 2272 3.181440 TGTTGGACAAGCTTCTCCTCAAT 60.181 43.478 19.96 0.00 0.00 2.57
2147 2273 2.172505 TGTTGGACAAGCTTCTCCTCAA 59.827 45.455 19.96 5.96 0.00 3.02
2148 2274 1.768275 TGTTGGACAAGCTTCTCCTCA 59.232 47.619 19.96 15.67 0.00 3.86
2149 2275 2.550830 TGTTGGACAAGCTTCTCCTC 57.449 50.000 19.96 13.65 0.00 3.71
2150 2276 2.613977 CGATGTTGGACAAGCTTCTCCT 60.614 50.000 19.96 1.39 0.00 3.69
2151 2277 1.734465 CGATGTTGGACAAGCTTCTCC 59.266 52.381 13.47 13.47 0.00 3.71
2152 2278 2.413453 GACGATGTTGGACAAGCTTCTC 59.587 50.000 0.00 0.00 0.00 2.87
2153 2279 2.037772 AGACGATGTTGGACAAGCTTCT 59.962 45.455 0.00 0.00 0.00 2.85
2154 2280 2.158449 CAGACGATGTTGGACAAGCTTC 59.842 50.000 0.00 0.00 0.00 3.86
2155 2281 2.146342 CAGACGATGTTGGACAAGCTT 58.854 47.619 0.00 0.00 0.00 3.74
2156 2282 1.344438 TCAGACGATGTTGGACAAGCT 59.656 47.619 0.00 0.00 0.00 3.74
2157 2283 1.728971 CTCAGACGATGTTGGACAAGC 59.271 52.381 0.00 0.00 0.00 4.01
2158 2284 3.303881 TCTCAGACGATGTTGGACAAG 57.696 47.619 0.00 0.00 0.00 3.16
2159 2285 3.588955 CATCTCAGACGATGTTGGACAA 58.411 45.455 0.00 0.00 36.80 3.18
2160 2286 2.094026 CCATCTCAGACGATGTTGGACA 60.094 50.000 0.00 0.00 39.26 4.02
2161 2287 2.093973 ACCATCTCAGACGATGTTGGAC 60.094 50.000 0.00 0.00 39.26 4.02
2162 2288 2.179427 ACCATCTCAGACGATGTTGGA 58.821 47.619 0.00 0.00 39.26 3.53
2163 2289 2.680312 ACCATCTCAGACGATGTTGG 57.320 50.000 0.00 0.39 39.26 3.77
2164 2290 3.125829 CCAAACCATCTCAGACGATGTTG 59.874 47.826 0.00 7.25 39.26 3.33
2165 2291 3.338249 CCAAACCATCTCAGACGATGTT 58.662 45.455 0.00 0.00 39.26 2.71
2166 2292 2.355108 CCCAAACCATCTCAGACGATGT 60.355 50.000 0.00 0.00 39.26 3.06
2167 2293 2.283298 CCCAAACCATCTCAGACGATG 58.717 52.381 0.00 0.00 40.32 3.84
2168 2294 1.407437 GCCCAAACCATCTCAGACGAT 60.407 52.381 0.00 0.00 0.00 3.73
2169 2295 0.036388 GCCCAAACCATCTCAGACGA 60.036 55.000 0.00 0.00 0.00 4.20
2170 2296 0.321564 TGCCCAAACCATCTCAGACG 60.322 55.000 0.00 0.00 0.00 4.18
2171 2297 2.134789 ATGCCCAAACCATCTCAGAC 57.865 50.000 0.00 0.00 0.00 3.51
2172 2298 4.079844 TGAATATGCCCAAACCATCTCAGA 60.080 41.667 0.00 0.00 0.00 3.27
2173 2299 4.209538 TGAATATGCCCAAACCATCTCAG 58.790 43.478 0.00 0.00 0.00 3.35
2174 2300 4.209538 CTGAATATGCCCAAACCATCTCA 58.790 43.478 0.00 0.00 0.00 3.27
2175 2301 3.005155 GCTGAATATGCCCAAACCATCTC 59.995 47.826 0.00 0.00 0.00 2.75
2176 2302 2.961062 GCTGAATATGCCCAAACCATCT 59.039 45.455 0.00 0.00 0.00 2.90
2177 2303 2.287788 CGCTGAATATGCCCAAACCATC 60.288 50.000 0.00 0.00 0.00 3.51
2178 2304 1.682854 CGCTGAATATGCCCAAACCAT 59.317 47.619 0.00 0.00 0.00 3.55
2179 2305 1.102154 CGCTGAATATGCCCAAACCA 58.898 50.000 0.00 0.00 0.00 3.67
2180 2306 0.249031 GCGCTGAATATGCCCAAACC 60.249 55.000 0.00 0.00 0.00 3.27
2181 2307 0.455410 TGCGCTGAATATGCCCAAAC 59.545 50.000 9.73 0.00 0.00 2.93
2182 2308 0.740149 CTGCGCTGAATATGCCCAAA 59.260 50.000 9.73 0.00 0.00 3.28
2183 2309 1.102809 CCTGCGCTGAATATGCCCAA 61.103 55.000 16.65 0.00 0.00 4.12
2184 2310 1.526686 CCTGCGCTGAATATGCCCA 60.527 57.895 16.65 0.00 0.00 5.36
2185 2311 2.912624 GCCTGCGCTGAATATGCCC 61.913 63.158 16.65 0.00 0.00 5.36
2186 2312 2.641559 GCCTGCGCTGAATATGCC 59.358 61.111 16.65 0.00 0.00 4.40
2187 2313 1.849976 GAGGCCTGCGCTGAATATGC 61.850 60.000 12.00 9.73 34.44 3.14
2188 2314 1.233285 GGAGGCCTGCGCTGAATATG 61.233 60.000 12.00 0.00 34.44 1.78
2189 2315 1.072159 GGAGGCCTGCGCTGAATAT 59.928 57.895 12.00 0.00 34.44 1.28
2190 2316 2.315781 CTGGAGGCCTGCGCTGAATA 62.316 60.000 20.39 0.00 34.44 1.75
2191 2317 3.694058 CTGGAGGCCTGCGCTGAAT 62.694 63.158 20.39 0.55 34.44 2.57
2192 2318 4.399395 CTGGAGGCCTGCGCTGAA 62.399 66.667 20.39 0.00 34.44 3.02
2194 2320 4.399395 TTCTGGAGGCCTGCGCTG 62.399 66.667 20.39 12.20 34.44 5.18
2195 2321 4.093291 CTTCTGGAGGCCTGCGCT 62.093 66.667 20.39 0.00 34.44 5.92
2197 2323 4.093291 AGCTTCTGGAGGCCTGCG 62.093 66.667 20.39 14.23 33.44 5.18
2198 2324 2.124778 GAGCTTCTGGAGGCCTGC 60.125 66.667 18.95 18.95 33.44 4.85
2199 2325 2.254737 CTGGAGCTTCTGGAGGCCTG 62.255 65.000 12.00 0.00 33.44 4.85
2200 2326 1.994507 CTGGAGCTTCTGGAGGCCT 60.995 63.158 3.86 3.86 33.44 5.19
2201 2327 2.297129 ACTGGAGCTTCTGGAGGCC 61.297 63.158 3.68 0.00 33.44 5.19
2202 2328 1.078567 CACTGGAGCTTCTGGAGGC 60.079 63.158 3.68 0.00 0.00 4.70
2203 2329 1.078567 GCACTGGAGCTTCTGGAGG 60.079 63.158 3.68 0.00 0.00 4.30
2204 2330 0.252479 ATGCACTGGAGCTTCTGGAG 59.748 55.000 3.68 0.00 34.99 3.86
2205 2331 1.483827 CTATGCACTGGAGCTTCTGGA 59.516 52.381 3.68 0.00 34.99 3.86
2206 2332 1.950828 CTATGCACTGGAGCTTCTGG 58.049 55.000 3.68 0.00 34.99 3.86
2207 2333 1.297664 GCTATGCACTGGAGCTTCTG 58.702 55.000 0.00 0.00 33.28 3.02
2208 2334 0.179089 CGCTATGCACTGGAGCTTCT 60.179 55.000 9.31 0.00 33.91 2.85
2209 2335 1.156645 CCGCTATGCACTGGAGCTTC 61.157 60.000 9.31 0.00 33.91 3.86
2210 2336 1.153289 CCGCTATGCACTGGAGCTT 60.153 57.895 9.31 0.00 33.91 3.74
2211 2337 2.060383 TCCGCTATGCACTGGAGCT 61.060 57.895 9.31 0.00 33.91 4.09
2212 2338 1.884926 GTCCGCTATGCACTGGAGC 60.885 63.158 0.00 0.00 0.00 4.70
2213 2339 1.589993 CGTCCGCTATGCACTGGAG 60.590 63.158 0.00 0.00 0.00 3.86
2214 2340 2.494445 CGTCCGCTATGCACTGGA 59.506 61.111 0.00 0.00 0.00 3.86
2215 2341 2.586079 CCGTCCGCTATGCACTGG 60.586 66.667 0.00 0.00 0.00 4.00
2216 2342 3.264897 GCCGTCCGCTATGCACTG 61.265 66.667 0.00 0.00 0.00 3.66
2225 2351 3.849953 CACGCTTTAGCCGTCCGC 61.850 66.667 0.00 0.00 37.91 5.54
2226 2352 3.849953 GCACGCTTTAGCCGTCCG 61.850 66.667 0.00 0.00 37.91 4.79
2227 2353 3.849953 CGCACGCTTTAGCCGTCC 61.850 66.667 0.00 0.00 37.91 4.79
2228 2354 3.849953 CCGCACGCTTTAGCCGTC 61.850 66.667 0.00 0.00 37.91 4.79
2229 2355 4.367023 TCCGCACGCTTTAGCCGT 62.367 61.111 0.00 0.00 37.91 5.68
2230 2356 3.554692 CTCCGCACGCTTTAGCCG 61.555 66.667 0.00 0.00 37.91 5.52
2231 2357 1.090052 ATTCTCCGCACGCTTTAGCC 61.090 55.000 0.00 0.00 37.91 3.93
2232 2358 0.026803 CATTCTCCGCACGCTTTAGC 59.973 55.000 0.00 0.00 37.78 3.09
2233 2359 1.324736 GACATTCTCCGCACGCTTTAG 59.675 52.381 0.00 0.00 0.00 1.85
2234 2360 1.337354 TGACATTCTCCGCACGCTTTA 60.337 47.619 0.00 0.00 0.00 1.85
2235 2361 0.602638 TGACATTCTCCGCACGCTTT 60.603 50.000 0.00 0.00 0.00 3.51
2236 2362 0.602638 TTGACATTCTCCGCACGCTT 60.603 50.000 0.00 0.00 0.00 4.68
2237 2363 1.005037 TTGACATTCTCCGCACGCT 60.005 52.632 0.00 0.00 0.00 5.07
2238 2364 1.014044 TCTTGACATTCTCCGCACGC 61.014 55.000 0.00 0.00 0.00 5.34
2239 2365 0.994995 CTCTTGACATTCTCCGCACG 59.005 55.000 0.00 0.00 0.00 5.34
2240 2366 2.266554 CTCTCTTGACATTCTCCGCAC 58.733 52.381 0.00 0.00 0.00 5.34
2241 2367 1.205655 CCTCTCTTGACATTCTCCGCA 59.794 52.381 0.00 0.00 0.00 5.69
2242 2368 1.472376 CCCTCTCTTGACATTCTCCGC 60.472 57.143 0.00 0.00 0.00 5.54
2243 2369 1.472376 GCCCTCTCTTGACATTCTCCG 60.472 57.143 0.00 0.00 0.00 4.63
2244 2370 1.472376 CGCCCTCTCTTGACATTCTCC 60.472 57.143 0.00 0.00 0.00 3.71
2245 2371 1.472376 CCGCCCTCTCTTGACATTCTC 60.472 57.143 0.00 0.00 0.00 2.87
2246 2372 0.539051 CCGCCCTCTCTTGACATTCT 59.461 55.000 0.00 0.00 0.00 2.40
2247 2373 0.462759 CCCGCCCTCTCTTGACATTC 60.463 60.000 0.00 0.00 0.00 2.67
2248 2374 1.604378 CCCGCCCTCTCTTGACATT 59.396 57.895 0.00 0.00 0.00 2.71
2249 2375 2.370445 CCCCGCCCTCTCTTGACAT 61.370 63.158 0.00 0.00 0.00 3.06
2250 2376 2.449967 TACCCCGCCCTCTCTTGACA 62.450 60.000 0.00 0.00 0.00 3.58
2251 2377 1.677637 CTACCCCGCCCTCTCTTGAC 61.678 65.000 0.00 0.00 0.00 3.18
2252 2378 1.381327 CTACCCCGCCCTCTCTTGA 60.381 63.158 0.00 0.00 0.00 3.02
2253 2379 1.381327 TCTACCCCGCCCTCTCTTG 60.381 63.158 0.00 0.00 0.00 3.02
2254 2380 1.381463 GTCTACCCCGCCCTCTCTT 60.381 63.158 0.00 0.00 0.00 2.85
2255 2381 2.279408 GTCTACCCCGCCCTCTCT 59.721 66.667 0.00 0.00 0.00 3.10
2256 2382 2.838693 GGTCTACCCCGCCCTCTC 60.839 72.222 0.00 0.00 0.00 3.20
2257 2383 4.835891 CGGTCTACCCCGCCCTCT 62.836 72.222 0.00 0.00 41.78 3.69
2264 2390 2.773993 TGTCAAATTCGGTCTACCCC 57.226 50.000 0.00 0.00 0.00 4.95
2265 2391 2.943033 CCATGTCAAATTCGGTCTACCC 59.057 50.000 0.00 0.00 0.00 3.69
2266 2392 2.943033 CCCATGTCAAATTCGGTCTACC 59.057 50.000 0.00 0.00 0.00 3.18
2267 2393 3.869065 TCCCATGTCAAATTCGGTCTAC 58.131 45.455 0.00 0.00 0.00 2.59
2268 2394 3.118408 CCTCCCATGTCAAATTCGGTCTA 60.118 47.826 0.00 0.00 0.00 2.59
2269 2395 2.356125 CCTCCCATGTCAAATTCGGTCT 60.356 50.000 0.00 0.00 0.00 3.85
2270 2396 2.017049 CCTCCCATGTCAAATTCGGTC 58.983 52.381 0.00 0.00 0.00 4.79
2271 2397 1.633432 TCCTCCCATGTCAAATTCGGT 59.367 47.619 0.00 0.00 0.00 4.69
2272 2398 2.292267 CTCCTCCCATGTCAAATTCGG 58.708 52.381 0.00 0.00 0.00 4.30
2273 2399 2.939103 GACTCCTCCCATGTCAAATTCG 59.061 50.000 0.00 0.00 0.00 3.34
2274 2400 3.282885 GGACTCCTCCCATGTCAAATTC 58.717 50.000 0.00 0.00 32.84 2.17
2275 2401 2.356125 CGGACTCCTCCCATGTCAAATT 60.356 50.000 0.00 0.00 31.93 1.82
2276 2402 1.210478 CGGACTCCTCCCATGTCAAAT 59.790 52.381 0.00 0.00 31.93 2.32
2277 2403 0.613260 CGGACTCCTCCCATGTCAAA 59.387 55.000 0.00 0.00 31.93 2.69
2278 2404 0.544357 ACGGACTCCTCCCATGTCAA 60.544 55.000 0.00 0.00 31.93 3.18
2279 2405 0.544357 AACGGACTCCTCCCATGTCA 60.544 55.000 0.00 0.00 31.93 3.58
2280 2406 1.481871 TAACGGACTCCTCCCATGTC 58.518 55.000 0.00 0.00 31.93 3.06
2281 2407 1.831736 CTTAACGGACTCCTCCCATGT 59.168 52.381 0.00 0.00 31.93 3.21
2282 2408 2.101582 CTCTTAACGGACTCCTCCCATG 59.898 54.545 0.00 0.00 31.93 3.66
2283 2409 2.024273 TCTCTTAACGGACTCCTCCCAT 60.024 50.000 0.00 0.00 31.93 4.00
2284 2410 1.356738 TCTCTTAACGGACTCCTCCCA 59.643 52.381 0.00 0.00 31.93 4.37
2285 2411 2.025898 CTCTCTTAACGGACTCCTCCC 58.974 57.143 0.00 0.00 31.93 4.30
2286 2412 2.684374 GTCTCTCTTAACGGACTCCTCC 59.316 54.545 0.00 0.00 0.00 4.30
2287 2413 2.684374 GGTCTCTCTTAACGGACTCCTC 59.316 54.545 0.00 0.00 0.00 3.71
2288 2414 2.309458 AGGTCTCTCTTAACGGACTCCT 59.691 50.000 0.00 0.00 0.00 3.69
2289 2415 2.424246 CAGGTCTCTCTTAACGGACTCC 59.576 54.545 0.00 0.00 0.00 3.85
2290 2416 3.345414 TCAGGTCTCTCTTAACGGACTC 58.655 50.000 0.00 0.00 0.00 3.36
2291 2417 3.436577 TCAGGTCTCTCTTAACGGACT 57.563 47.619 0.00 0.00 0.00 3.85
2292 2418 3.119424 CCTTCAGGTCTCTCTTAACGGAC 60.119 52.174 0.00 0.00 0.00 4.79
2293 2419 3.090037 CCTTCAGGTCTCTCTTAACGGA 58.910 50.000 0.00 0.00 0.00 4.69
2294 2420 3.090037 TCCTTCAGGTCTCTCTTAACGG 58.910 50.000 0.00 0.00 36.34 4.44
2295 2421 4.993029 ATCCTTCAGGTCTCTCTTAACG 57.007 45.455 0.00 0.00 36.34 3.18
2296 2422 5.187967 TCCAATCCTTCAGGTCTCTCTTAAC 59.812 44.000 0.00 0.00 36.34 2.01
2297 2423 5.342017 TCCAATCCTTCAGGTCTCTCTTAA 58.658 41.667 0.00 0.00 36.34 1.85
2298 2424 4.947883 TCCAATCCTTCAGGTCTCTCTTA 58.052 43.478 0.00 0.00 36.34 2.10
2299 2425 3.774216 CTCCAATCCTTCAGGTCTCTCTT 59.226 47.826 0.00 0.00 36.34 2.85
2300 2426 3.245948 ACTCCAATCCTTCAGGTCTCTCT 60.246 47.826 0.00 0.00 36.34 3.10
2301 2427 3.103742 ACTCCAATCCTTCAGGTCTCTC 58.896 50.000 0.00 0.00 36.34 3.20
2302 2428 3.197927 ACTCCAATCCTTCAGGTCTCT 57.802 47.619 0.00 0.00 36.34 3.10
2303 2429 4.651503 TGATACTCCAATCCTTCAGGTCTC 59.348 45.833 0.00 0.00 36.34 3.36
2304 2430 4.407296 GTGATACTCCAATCCTTCAGGTCT 59.593 45.833 0.00 0.00 36.34 3.85
2305 2431 4.443598 GGTGATACTCCAATCCTTCAGGTC 60.444 50.000 0.00 0.00 36.34 3.85
2306 2432 3.456277 GGTGATACTCCAATCCTTCAGGT 59.544 47.826 0.00 0.00 36.34 4.00
2307 2433 3.455910 TGGTGATACTCCAATCCTTCAGG 59.544 47.826 0.00 0.00 31.50 3.86
2308 2434 4.760530 TGGTGATACTCCAATCCTTCAG 57.239 45.455 0.00 0.00 31.50 3.02
2309 2435 5.250543 TCTTTGGTGATACTCCAATCCTTCA 59.749 40.000 6.20 0.00 43.25 3.02
2310 2436 5.745227 TCTTTGGTGATACTCCAATCCTTC 58.255 41.667 6.20 0.00 43.25 3.46
2311 2437 5.749462 CTCTTTGGTGATACTCCAATCCTT 58.251 41.667 6.20 0.00 43.25 3.36
2312 2438 4.384647 GCTCTTTGGTGATACTCCAATCCT 60.385 45.833 6.20 0.00 43.25 3.24
2313 2439 3.879892 GCTCTTTGGTGATACTCCAATCC 59.120 47.826 6.20 0.00 43.25 3.01
2314 2440 4.775236 AGCTCTTTGGTGATACTCCAATC 58.225 43.478 6.20 0.00 43.25 2.67
2315 2441 4.851639 AGCTCTTTGGTGATACTCCAAT 57.148 40.909 6.20 0.00 43.25 3.16
2316 2442 4.383118 GCTAGCTCTTTGGTGATACTCCAA 60.383 45.833 7.70 0.00 42.29 3.53
2317 2443 3.133003 GCTAGCTCTTTGGTGATACTCCA 59.867 47.826 7.70 0.00 0.00 3.86
2318 2444 3.386402 AGCTAGCTCTTTGGTGATACTCC 59.614 47.826 12.68 0.00 0.00 3.85
2319 2445 4.664150 AGCTAGCTCTTTGGTGATACTC 57.336 45.455 12.68 0.00 0.00 2.59
2320 2446 5.011533 CCATAGCTAGCTCTTTGGTGATACT 59.988 44.000 23.26 0.00 32.65 2.12
2321 2447 5.011125 TCCATAGCTAGCTCTTTGGTGATAC 59.989 44.000 27.50 0.00 36.79 2.24
2322 2448 5.011125 GTCCATAGCTAGCTCTTTGGTGATA 59.989 44.000 27.50 14.48 36.79 2.15
2323 2449 3.969976 TCCATAGCTAGCTCTTTGGTGAT 59.030 43.478 27.50 12.14 36.79 3.06
2324 2450 3.133003 GTCCATAGCTAGCTCTTTGGTGA 59.867 47.826 27.50 15.24 36.79 4.02
2325 2451 3.118629 TGTCCATAGCTAGCTCTTTGGTG 60.119 47.826 27.50 16.61 36.79 4.17
2326 2452 3.107601 TGTCCATAGCTAGCTCTTTGGT 58.892 45.455 27.50 8.05 36.79 3.67
2327 2453 3.494048 CCTGTCCATAGCTAGCTCTTTGG 60.494 52.174 23.26 24.37 36.78 3.28
2328 2454 3.494048 CCCTGTCCATAGCTAGCTCTTTG 60.494 52.174 23.26 16.78 0.00 2.77
2329 2455 2.703007 CCCTGTCCATAGCTAGCTCTTT 59.297 50.000 23.26 4.57 0.00 2.52
2330 2456 2.324541 CCCTGTCCATAGCTAGCTCTT 58.675 52.381 23.26 7.47 0.00 2.85
2331 2457 1.482177 CCCCTGTCCATAGCTAGCTCT 60.482 57.143 23.26 9.05 0.00 4.09
2332 2458 0.972883 CCCCTGTCCATAGCTAGCTC 59.027 60.000 23.26 7.00 0.00 4.09
2333 2459 0.266152 ACCCCTGTCCATAGCTAGCT 59.734 55.000 23.12 23.12 0.00 3.32
2334 2460 0.394565 CACCCCTGTCCATAGCTAGC 59.605 60.000 6.62 6.62 0.00 3.42
2335 2461 0.394565 GCACCCCTGTCCATAGCTAG 59.605 60.000 0.00 0.00 0.00 3.42
2336 2462 1.399744 CGCACCCCTGTCCATAGCTA 61.400 60.000 0.00 0.00 0.00 3.32
2337 2463 2.735772 CGCACCCCTGTCCATAGCT 61.736 63.158 0.00 0.00 0.00 3.32
2338 2464 2.203070 CGCACCCCTGTCCATAGC 60.203 66.667 0.00 0.00 0.00 2.97
2339 2465 1.153369 CACGCACCCCTGTCCATAG 60.153 63.158 0.00 0.00 0.00 2.23
2340 2466 2.665089 CCACGCACCCCTGTCCATA 61.665 63.158 0.00 0.00 0.00 2.74
2341 2467 4.033776 CCACGCACCCCTGTCCAT 62.034 66.667 0.00 0.00 0.00 3.41
2343 2469 3.901797 CTTCCACGCACCCCTGTCC 62.902 68.421 0.00 0.00 0.00 4.02
2344 2470 2.358737 CTTCCACGCACCCCTGTC 60.359 66.667 0.00 0.00 0.00 3.51
2345 2471 4.643387 GCTTCCACGCACCCCTGT 62.643 66.667 0.00 0.00 0.00 4.00
2346 2472 3.850098 AAGCTTCCACGCACCCCTG 62.850 63.158 0.00 0.00 0.00 4.45
2347 2473 3.570212 AAGCTTCCACGCACCCCT 61.570 61.111 0.00 0.00 0.00 4.79
2348 2474 3.365265 CAAGCTTCCACGCACCCC 61.365 66.667 0.00 0.00 0.00 4.95
2349 2475 4.043200 GCAAGCTTCCACGCACCC 62.043 66.667 0.00 0.00 0.00 4.61
2350 2476 1.026718 ATAGCAAGCTTCCACGCACC 61.027 55.000 8.96 0.00 0.00 5.01
2351 2477 0.375106 GATAGCAAGCTTCCACGCAC 59.625 55.000 8.96 0.00 0.00 5.34
2352 2478 0.744414 GGATAGCAAGCTTCCACGCA 60.744 55.000 8.96 0.00 0.00 5.24
2353 2479 0.744414 TGGATAGCAAGCTTCCACGC 60.744 55.000 16.61 0.00 34.65 5.34
2354 2480 1.600957 CATGGATAGCAAGCTTCCACG 59.399 52.381 20.41 13.24 42.09 4.94
2355 2481 2.357009 CACATGGATAGCAAGCTTCCAC 59.643 50.000 20.41 0.00 42.09 4.02
2356 2482 2.646930 CACATGGATAGCAAGCTTCCA 58.353 47.619 20.33 20.33 43.37 3.53
2357 2483 1.336125 GCACATGGATAGCAAGCTTCC 59.664 52.381 0.00 7.95 0.00 3.46
2358 2484 1.336125 GGCACATGGATAGCAAGCTTC 59.664 52.381 0.00 0.00 0.00 3.86
2359 2485 1.341285 TGGCACATGGATAGCAAGCTT 60.341 47.619 0.00 0.00 0.00 3.74
2360 2486 0.256752 TGGCACATGGATAGCAAGCT 59.743 50.000 0.00 0.00 0.00 3.74
2361 2487 0.666913 CTGGCACATGGATAGCAAGC 59.333 55.000 0.00 0.00 38.20 4.01
2362 2488 2.219458 CTCTGGCACATGGATAGCAAG 58.781 52.381 0.00 0.00 38.20 4.01
2363 2489 1.748244 GCTCTGGCACATGGATAGCAA 60.748 52.381 0.00 0.00 38.20 3.91
2364 2490 0.179037 GCTCTGGCACATGGATAGCA 60.179 55.000 0.00 0.00 38.20 3.49
2365 2491 0.888285 GGCTCTGGCACATGGATAGC 60.888 60.000 0.00 0.00 38.20 2.97
2366 2492 0.471191 TGGCTCTGGCACATGGATAG 59.529 55.000 0.00 0.00 38.20 2.08
2367 2493 1.142936 ATGGCTCTGGCACATGGATA 58.857 50.000 0.00 0.00 41.84 2.59
2368 2494 0.467474 CATGGCTCTGGCACATGGAT 60.467 55.000 7.68 0.00 41.84 3.41
2369 2495 1.077285 CATGGCTCTGGCACATGGA 60.077 57.895 7.68 0.00 41.84 3.41
2370 2496 1.077285 TCATGGCTCTGGCACATGG 60.077 57.895 13.76 0.00 41.84 3.66
2371 2497 0.393944 ACTCATGGCTCTGGCACATG 60.394 55.000 8.97 8.97 41.84 3.21
2372 2498 0.330604 AACTCATGGCTCTGGCACAT 59.669 50.000 0.00 0.00 41.84 3.21
2373 2499 0.607217 CAACTCATGGCTCTGGCACA 60.607 55.000 0.00 0.00 41.84 4.57
2374 2500 1.310933 CCAACTCATGGCTCTGGCAC 61.311 60.000 0.00 0.00 43.80 5.01
2375 2501 1.001764 CCAACTCATGGCTCTGGCA 60.002 57.895 0.00 0.00 43.80 4.92
2376 2502 3.915575 CCAACTCATGGCTCTGGC 58.084 61.111 0.00 0.00 43.80 4.85
2384 2510 2.625737 AGATCTCGCAACCAACTCATG 58.374 47.619 0.00 0.00 0.00 3.07
2385 2511 3.340814 AAGATCTCGCAACCAACTCAT 57.659 42.857 0.00 0.00 0.00 2.90
2386 2512 2.839486 AAGATCTCGCAACCAACTCA 57.161 45.000 0.00 0.00 0.00 3.41
2387 2513 3.557595 CCATAAGATCTCGCAACCAACTC 59.442 47.826 0.00 0.00 0.00 3.01
2388 2514 3.535561 CCATAAGATCTCGCAACCAACT 58.464 45.455 0.00 0.00 0.00 3.16
2389 2515 2.614057 CCCATAAGATCTCGCAACCAAC 59.386 50.000 0.00 0.00 0.00 3.77
2390 2516 2.238646 ACCCATAAGATCTCGCAACCAA 59.761 45.455 0.00 0.00 0.00 3.67
2391 2517 1.837439 ACCCATAAGATCTCGCAACCA 59.163 47.619 0.00 0.00 0.00 3.67
2392 2518 2.622064 ACCCATAAGATCTCGCAACC 57.378 50.000 0.00 0.00 0.00 3.77
2393 2519 3.938963 TGAAACCCATAAGATCTCGCAAC 59.061 43.478 0.00 0.00 0.00 4.17
2394 2520 3.938963 GTGAAACCCATAAGATCTCGCAA 59.061 43.478 0.00 0.00 0.00 4.85
2395 2521 3.531538 GTGAAACCCATAAGATCTCGCA 58.468 45.455 0.00 0.00 0.00 5.10
2410 2536 1.485480 GGGGTAGGCTAGAGGTGAAAC 59.515 57.143 0.00 0.00 0.00 2.78
2411 2537 1.079825 TGGGGTAGGCTAGAGGTGAAA 59.920 52.381 0.00 0.00 0.00 2.69
2412 2538 0.714180 TGGGGTAGGCTAGAGGTGAA 59.286 55.000 0.00 0.00 0.00 3.18
2413 2539 0.714180 TTGGGGTAGGCTAGAGGTGA 59.286 55.000 0.00 0.00 0.00 4.02
2414 2540 0.831307 GTTGGGGTAGGCTAGAGGTG 59.169 60.000 0.00 0.00 0.00 4.00
2415 2541 0.717196 AGTTGGGGTAGGCTAGAGGT 59.283 55.000 0.00 0.00 0.00 3.85
2416 2542 1.486726 CAAGTTGGGGTAGGCTAGAGG 59.513 57.143 0.00 0.00 0.00 3.69
2417 2543 2.188817 ACAAGTTGGGGTAGGCTAGAG 58.811 52.381 7.96 0.00 0.00 2.43
2418 2544 2.337359 ACAAGTTGGGGTAGGCTAGA 57.663 50.000 7.96 0.00 0.00 2.43
2419 2545 3.081804 CAAACAAGTTGGGGTAGGCTAG 58.918 50.000 7.96 0.00 33.18 3.42
2420 2546 3.149005 CAAACAAGTTGGGGTAGGCTA 57.851 47.619 7.96 0.00 33.18 3.93
2421 2547 1.995376 CAAACAAGTTGGGGTAGGCT 58.005 50.000 7.96 0.00 33.18 4.58
2430 2556 3.636764 AGCCTTTAGTCCCAAACAAGTTG 59.363 43.478 0.00 0.00 36.94 3.16
2431 2557 3.910989 AGCCTTTAGTCCCAAACAAGTT 58.089 40.909 0.00 0.00 0.00 2.66
2432 2558 3.595190 AGCCTTTAGTCCCAAACAAGT 57.405 42.857 0.00 0.00 0.00 3.16
2433 2559 4.099419 ACAAAGCCTTTAGTCCCAAACAAG 59.901 41.667 0.00 0.00 0.00 3.16
2434 2560 4.027437 ACAAAGCCTTTAGTCCCAAACAA 58.973 39.130 0.00 0.00 0.00 2.83
2435 2561 3.637769 ACAAAGCCTTTAGTCCCAAACA 58.362 40.909 0.00 0.00 0.00 2.83
2436 2562 4.142026 ACAACAAAGCCTTTAGTCCCAAAC 60.142 41.667 0.00 0.00 0.00 2.93
2437 2563 4.027437 ACAACAAAGCCTTTAGTCCCAAA 58.973 39.130 0.00 0.00 0.00 3.28
2438 2564 3.637769 ACAACAAAGCCTTTAGTCCCAA 58.362 40.909 0.00 0.00 0.00 4.12
2439 2565 3.306472 ACAACAAAGCCTTTAGTCCCA 57.694 42.857 0.00 0.00 0.00 4.37
2440 2566 3.383505 ACAACAACAAAGCCTTTAGTCCC 59.616 43.478 0.00 0.00 0.00 4.46
2441 2567 4.649088 ACAACAACAAAGCCTTTAGTCC 57.351 40.909 0.00 0.00 0.00 3.85
2442 2568 5.407502 ACAACAACAACAAAGCCTTTAGTC 58.592 37.500 0.00 0.00 0.00 2.59
2443 2569 5.400066 ACAACAACAACAAAGCCTTTAGT 57.600 34.783 0.00 0.00 0.00 2.24
2444 2570 5.637387 ACAACAACAACAACAAAGCCTTTAG 59.363 36.000 0.00 0.00 0.00 1.85
2445 2571 5.542779 ACAACAACAACAACAAAGCCTTTA 58.457 33.333 0.00 0.00 0.00 1.85
2446 2572 4.384940 ACAACAACAACAACAAAGCCTTT 58.615 34.783 0.00 0.00 0.00 3.11
2447 2573 4.001618 ACAACAACAACAACAAAGCCTT 57.998 36.364 0.00 0.00 0.00 4.35
2448 2574 3.676291 ACAACAACAACAACAAAGCCT 57.324 38.095 0.00 0.00 0.00 4.58
2449 2575 5.350091 ACAATACAACAACAACAACAAAGCC 59.650 36.000 0.00 0.00 0.00 4.35
2450 2576 6.401955 ACAATACAACAACAACAACAAAGC 57.598 33.333 0.00 0.00 0.00 3.51
2451 2577 8.238481 AGAACAATACAACAACAACAACAAAG 57.762 30.769 0.00 0.00 0.00 2.77
2452 2578 9.130312 GTAGAACAATACAACAACAACAACAAA 57.870 29.630 0.00 0.00 0.00 2.83
2453 2579 7.755822 GGTAGAACAATACAACAACAACAACAA 59.244 33.333 0.00 0.00 0.00 2.83
2454 2580 7.121463 AGGTAGAACAATACAACAACAACAACA 59.879 33.333 0.00 0.00 0.00 3.33
2455 2581 7.477494 AGGTAGAACAATACAACAACAACAAC 58.523 34.615 0.00 0.00 0.00 3.32
2456 2582 7.633193 AGGTAGAACAATACAACAACAACAA 57.367 32.000 0.00 0.00 0.00 2.83
2457 2583 7.633193 AAGGTAGAACAATACAACAACAACA 57.367 32.000 0.00 0.00 0.00 3.33
2458 2584 9.442033 GTAAAGGTAGAACAATACAACAACAAC 57.558 33.333 0.00 0.00 0.00 3.32
2459 2585 9.175312 TGTAAAGGTAGAACAATACAACAACAA 57.825 29.630 0.00 0.00 0.00 2.83
2460 2586 8.614346 GTGTAAAGGTAGAACAATACAACAACA 58.386 33.333 0.00 0.00 0.00 3.33
2461 2587 8.071967 GGTGTAAAGGTAGAACAATACAACAAC 58.928 37.037 0.00 0.00 32.61 3.32
2462 2588 7.229106 GGGTGTAAAGGTAGAACAATACAACAA 59.771 37.037 0.00 0.00 33.69 2.83
2463 2589 6.711645 GGGTGTAAAGGTAGAACAATACAACA 59.288 38.462 0.00 0.00 33.69 3.33
2464 2590 6.711645 TGGGTGTAAAGGTAGAACAATACAAC 59.288 38.462 0.00 0.00 31.78 3.32
2465 2591 6.839454 TGGGTGTAAAGGTAGAACAATACAA 58.161 36.000 0.00 0.00 0.00 2.41
2466 2592 6.436738 TGGGTGTAAAGGTAGAACAATACA 57.563 37.500 0.00 0.00 0.00 2.29
2467 2593 7.748691 TTTGGGTGTAAAGGTAGAACAATAC 57.251 36.000 0.00 0.00 0.00 1.89
2533 2659 4.822026 ACAATCTCAAGAACCTAGAACCG 58.178 43.478 0.00 0.00 0.00 4.44
2938 3070 5.872617 CACTTCCGTAAGATGGTCATTGTTA 59.127 40.000 0.00 0.00 43.02 2.41
2979 3111 7.201350 GCAAGTTTTTCAGTTTCAAGTGTAGTG 60.201 37.037 0.00 0.00 0.00 2.74
2987 3119 9.598517 AATGAATAGCAAGTTTTTCAGTTTCAA 57.401 25.926 0.00 0.00 32.13 2.69
3111 3243 5.125417 ACCATTCAAACGTATTCCCAAGATG 59.875 40.000 0.00 0.00 0.00 2.90
3204 3337 8.421784 CAAAGGTATACTAGCAGTATGGAAGAA 58.578 37.037 15.05 0.00 41.23 2.52
3213 3346 6.812160 CGAGAAAACAAAGGTATACTAGCAGT 59.188 38.462 2.25 0.00 0.00 4.40
3242 3375 7.140705 CACTGAAAGAACATAAACAATGAGCA 58.859 34.615 0.00 0.00 36.79 4.26
3244 3377 8.131100 ACACACTGAAAGAACATAAACAATGAG 58.869 33.333 0.00 0.00 36.79 2.90
3325 3458 2.242452 GGAGGGAGTGAAAAATAGGCCT 59.758 50.000 11.78 11.78 0.00 5.19
3367 3500 5.081888 TGTCGCGGTTTTAGTTCTAAAAC 57.918 39.130 26.66 26.66 44.71 2.43
3368 3501 5.523188 TCTTGTCGCGGTTTTAGTTCTAAAA 59.477 36.000 6.13 12.02 0.00 1.52
3369 3502 5.049167 TCTTGTCGCGGTTTTAGTTCTAAA 58.951 37.500 6.13 1.47 0.00 1.85
3370 3503 4.619973 TCTTGTCGCGGTTTTAGTTCTAA 58.380 39.130 6.13 0.00 0.00 2.10
3371 3504 4.241590 TCTTGTCGCGGTTTTAGTTCTA 57.758 40.909 6.13 0.00 0.00 2.10
3372 3505 3.102052 TCTTGTCGCGGTTTTAGTTCT 57.898 42.857 6.13 0.00 0.00 3.01
3373 3506 3.865224 TTCTTGTCGCGGTTTTAGTTC 57.135 42.857 6.13 0.00 0.00 3.01
3374 3507 4.823790 AATTCTTGTCGCGGTTTTAGTT 57.176 36.364 6.13 0.00 0.00 2.24
3375 3508 5.220340 CGATAATTCTTGTCGCGGTTTTAGT 60.220 40.000 6.13 0.00 37.46 2.24
3376 3509 5.005012 TCGATAATTCTTGTCGCGGTTTTAG 59.995 40.000 6.13 0.00 42.89 1.85
3377 3510 4.863689 TCGATAATTCTTGTCGCGGTTTTA 59.136 37.500 6.13 0.00 42.89 1.52
3378 3511 3.680937 TCGATAATTCTTGTCGCGGTTTT 59.319 39.130 6.13 0.00 42.89 2.43
3379 3512 3.255725 TCGATAATTCTTGTCGCGGTTT 58.744 40.909 6.13 0.00 42.89 3.27
3380 3513 2.883574 TCGATAATTCTTGTCGCGGTT 58.116 42.857 6.13 0.00 42.89 4.44
3381 3514 2.572191 TCGATAATTCTTGTCGCGGT 57.428 45.000 6.13 0.00 42.89 5.68
3382 3515 2.346376 CGTTCGATAATTCTTGTCGCGG 60.346 50.000 6.13 0.00 42.89 6.46
3383 3516 2.346376 CCGTTCGATAATTCTTGTCGCG 60.346 50.000 0.00 0.00 42.89 5.87
3384 3517 2.855963 TCCGTTCGATAATTCTTGTCGC 59.144 45.455 1.74 0.00 42.89 5.19
3385 3518 3.486108 CCTCCGTTCGATAATTCTTGTCG 59.514 47.826 0.31 0.31 44.27 4.35
3386 3519 3.802685 CCCTCCGTTCGATAATTCTTGTC 59.197 47.826 0.00 0.00 0.00 3.18
3398 3531 1.307097 CCTACTACTCCCTCCGTTCG 58.693 60.000 0.00 0.00 0.00 3.95
3407 3540 5.181748 TCACGACTTCTAACCTACTACTCC 58.818 45.833 0.00 0.00 0.00 3.85
3408 3541 6.762661 AGATCACGACTTCTAACCTACTACTC 59.237 42.308 0.00 0.00 0.00 2.59
3409 3542 6.652053 AGATCACGACTTCTAACCTACTACT 58.348 40.000 0.00 0.00 0.00 2.57
3637 3772 6.472680 CAACTCATATCGACAACATGAACTG 58.527 40.000 0.00 0.00 0.00 3.16
3705 3840 9.457436 TTCCAGTTTTATTAACCTGATTCCTAC 57.543 33.333 0.00 0.00 0.00 3.18
3900 4067 6.780457 ATACTGCTAATCCAATGCAACTTT 57.220 33.333 0.00 0.00 36.22 2.66
3932 4099 4.734398 TTGCAGTGTTCAAAGTCCATTT 57.266 36.364 0.00 0.00 0.00 2.32
3940 4107 5.132897 AGTTTGTCTTTGCAGTGTTCAAA 57.867 34.783 0.00 0.00 33.04 2.69
3957 4124 1.372128 GCGGGCTTGCTTGAGTTTG 60.372 57.895 0.00 0.00 0.00 2.93
4034 4204 3.560068 ACCTCACTCATGTTTTGAACGAC 59.440 43.478 0.00 0.00 32.78 4.34
4037 4207 3.632145 ACCACCTCACTCATGTTTTGAAC 59.368 43.478 0.00 0.00 32.78 3.18
4207 4379 1.630369 TGGAAGAGTTCACTCCCCATG 59.370 52.381 12.33 0.00 43.88 3.66
4243 4415 2.158900 CGCCATCCATCTAGAACCAACT 60.159 50.000 0.00 0.00 0.00 3.16
4262 4434 1.242076 CATTCCATCCCAATCTCCGC 58.758 55.000 0.00 0.00 0.00 5.54
4263 4435 1.546323 CCCATTCCATCCCAATCTCCG 60.546 57.143 0.00 0.00 0.00 4.63
4299 4471 0.178935 AATTGGAGTTGGTGGTGGGG 60.179 55.000 0.00 0.00 0.00 4.96
4417 4590 5.538849 TTAGTACATCAATACATGCCCGA 57.461 39.130 0.00 0.00 0.00 5.14
4421 4594 6.136071 CGCCTTTTAGTACATCAATACATGC 58.864 40.000 0.00 0.00 0.00 4.06
4439 4612 2.038033 TGAAGTAAGCACTACCGCCTTT 59.962 45.455 0.00 0.00 33.48 3.11
4445 4618 7.522374 CAAGAAGAAATGAAGTAAGCACTACC 58.478 38.462 0.00 0.00 33.48 3.18
4552 4725 8.091449 AGATTATCTTCACTCGTGTCTCTTTTT 58.909 33.333 0.00 0.00 0.00 1.94
5008 5399 1.888512 GTTCCAATGGCAGCAGAAGAA 59.111 47.619 0.00 0.00 0.00 2.52
5032 5423 0.819582 CATGGTTGGGATGAACCTGC 59.180 55.000 0.00 0.00 45.07 4.85
5152 5543 4.143158 GCATAGCAATACAGCTGATCGAAG 60.143 45.833 23.35 6.02 46.11 3.79
5222 5614 4.814771 GGCCGTCATATAAATATAGCACCC 59.185 45.833 0.00 0.00 0.00 4.61
5223 5615 5.293569 GTGGCCGTCATATAAATATAGCACC 59.706 44.000 0.00 0.00 0.00 5.01
5275 5667 1.870993 CGTTCGGGATTTATCGGGGTC 60.871 57.143 0.00 0.00 0.00 4.46
5276 5668 0.105408 CGTTCGGGATTTATCGGGGT 59.895 55.000 0.00 0.00 0.00 4.95
5316 5726 2.302260 TGCCATGAAAAACGTTCAGGA 58.698 42.857 0.00 0.00 32.54 3.86
5319 5729 3.791973 AGTTGCCATGAAAAACGTTCA 57.208 38.095 0.00 0.00 0.00 3.18
5320 5730 5.463499 AAAAGTTGCCATGAAAAACGTTC 57.537 34.783 0.00 0.00 0.00 3.95
5336 5747 3.502211 CCACCTCGCATCAACTAAAAGTT 59.498 43.478 0.00 0.00 39.39 2.66
5337 5748 3.074412 CCACCTCGCATCAACTAAAAGT 58.926 45.455 0.00 0.00 0.00 2.66
5338 5749 2.159517 GCCACCTCGCATCAACTAAAAG 60.160 50.000 0.00 0.00 0.00 2.27
5339 5750 1.810151 GCCACCTCGCATCAACTAAAA 59.190 47.619 0.00 0.00 0.00 1.52
5340 5751 1.271108 TGCCACCTCGCATCAACTAAA 60.271 47.619 0.00 0.00 32.62 1.85
5341 5752 0.323302 TGCCACCTCGCATCAACTAA 59.677 50.000 0.00 0.00 32.62 2.24
5342 5753 0.323302 TTGCCACCTCGCATCAACTA 59.677 50.000 0.00 0.00 38.87 2.24
5343 5754 1.073025 TTGCCACCTCGCATCAACT 59.927 52.632 0.00 0.00 38.87 3.16
5344 5755 1.210155 GTTGCCACCTCGCATCAAC 59.790 57.895 0.00 0.00 38.87 3.18
5345 5756 0.537143 AAGTTGCCACCTCGCATCAA 60.537 50.000 0.00 0.00 38.87 2.57
5346 5757 0.537143 AAAGTTGCCACCTCGCATCA 60.537 50.000 0.00 0.00 38.87 3.07
5347 5758 1.398390 CTAAAGTTGCCACCTCGCATC 59.602 52.381 0.00 0.00 38.87 3.91
5348 5759 1.271379 ACTAAAGTTGCCACCTCGCAT 60.271 47.619 0.00 0.00 38.87 4.73
5349 5760 0.107831 ACTAAAGTTGCCACCTCGCA 59.892 50.000 0.00 0.00 36.85 5.10
5350 5761 1.235724 AACTAAAGTTGCCACCTCGC 58.764 50.000 0.00 0.00 36.80 5.03
5424 5835 2.203153 ACGCGAGGTTGGCAAACT 60.203 55.556 19.53 19.53 36.48 2.66
5448 5859 3.112580 CGAACGTTTTTCATGGCAACTT 58.887 40.909 0.46 0.00 37.61 2.66
5459 5870 2.671596 CATGGCAATCCGAACGTTTTT 58.328 42.857 0.46 0.00 34.14 1.94
5460 5871 1.668628 GCATGGCAATCCGAACGTTTT 60.669 47.619 0.46 0.00 34.14 2.43
5461 5872 0.109319 GCATGGCAATCCGAACGTTT 60.109 50.000 0.46 0.00 34.14 3.60
5462 5873 0.960364 AGCATGGCAATCCGAACGTT 60.960 50.000 0.00 0.00 34.14 3.99
5463 5874 0.960364 AAGCATGGCAATCCGAACGT 60.960 50.000 0.00 0.00 34.14 3.99
5464 5875 1.013596 TAAGCATGGCAATCCGAACG 58.986 50.000 0.00 0.00 34.14 3.95
5465 5876 3.502191 TTTAAGCATGGCAATCCGAAC 57.498 42.857 0.00 0.00 34.14 3.95
5466 5877 4.441356 GGATTTTAAGCATGGCAATCCGAA 60.441 41.667 0.00 0.00 34.98 4.30
5467 5878 3.068024 GGATTTTAAGCATGGCAATCCGA 59.932 43.478 0.00 0.00 34.98 4.55
5468 5879 3.383761 GGATTTTAAGCATGGCAATCCG 58.616 45.455 0.00 0.00 34.98 4.18
5469 5880 3.068024 TCGGATTTTAAGCATGGCAATCC 59.932 43.478 0.00 7.57 39.66 3.01
5470 5881 4.305989 TCGGATTTTAAGCATGGCAATC 57.694 40.909 0.00 0.00 0.00 2.67
5471 5882 4.432712 GTTCGGATTTTAAGCATGGCAAT 58.567 39.130 0.00 0.00 0.00 3.56
5472 5883 3.671971 CGTTCGGATTTTAAGCATGGCAA 60.672 43.478 0.00 0.00 0.00 4.52
5473 5884 2.159448 CGTTCGGATTTTAAGCATGGCA 60.159 45.455 0.00 0.00 0.00 4.92
5474 5885 2.159435 ACGTTCGGATTTTAAGCATGGC 60.159 45.455 0.00 0.00 0.00 4.40
5475 5886 3.757745 ACGTTCGGATTTTAAGCATGG 57.242 42.857 0.00 0.00 0.00 3.66
5476 5887 3.778718 CGAACGTTCGGATTTTAAGCATG 59.221 43.478 36.53 8.97 46.30 4.06
5477 5888 3.998522 CGAACGTTCGGATTTTAAGCAT 58.001 40.909 36.53 0.00 46.30 3.79
5478 5889 3.443054 CGAACGTTCGGATTTTAAGCA 57.557 42.857 36.53 0.00 46.30 3.91
5490 5901 5.507974 GGAAATGATAAATCCCGAACGTTC 58.492 41.667 18.47 18.47 0.00 3.95
5494 5905 6.607735 TTACGGAAATGATAAATCCCGAAC 57.392 37.500 0.00 0.00 40.10 3.95
5667 6078 6.075984 TGGTGTTAGGGATCTTAGATAGTCC 58.924 44.000 0.00 0.00 0.00 3.85
5704 6115 6.475076 GTCATCAGTAAGCTGTTGAGATGTAG 59.525 42.308 12.96 0.00 46.20 2.74
5705 6116 6.153510 AGTCATCAGTAAGCTGTTGAGATGTA 59.846 38.462 12.96 2.60 46.20 2.29
5758 6169 7.150640 AGAACCAATCTCTGAATTTTCTTTGC 58.849 34.615 0.00 0.00 30.46 3.68
5769 6180 6.688073 AAGAAACCTAGAACCAATCTCTGA 57.312 37.500 0.00 0.00 39.71 3.27
5781 6192 3.908103 AGGCCACTGTAAAGAAACCTAGA 59.092 43.478 5.01 0.00 0.00 2.43
6129 6550 2.704725 ACGCAATGTCAATCACCAAC 57.295 45.000 0.00 0.00 0.00 3.77
6715 7137 3.944055 AGGCAGACTGTACACTACTTG 57.056 47.619 3.99 0.00 0.00 3.16
6769 7192 5.005779 CGTTAGATACATCTTGAGTGGCAAC 59.994 44.000 0.00 0.00 38.32 4.17
6867 7424 7.225341 TCGTTTCATATTCTGTTCAGATGGATG 59.775 37.037 3.28 7.70 0.00 3.51
6872 7429 7.331026 TCCTTCGTTTCATATTCTGTTCAGAT 58.669 34.615 3.28 0.00 0.00 2.90
6874 7431 6.968131 TCCTTCGTTTCATATTCTGTTCAG 57.032 37.500 0.00 0.00 0.00 3.02
6881 7438 9.968870 ACTATCTACTTCCTTCGTTTCATATTC 57.031 33.333 0.00 0.00 0.00 1.75
6891 7448 8.081208 TCATACGTAACTATCTACTTCCTTCG 57.919 38.462 0.00 0.00 0.00 3.79
6953 7531 8.442632 AAATGGTAGATGTATGTTGTCATCAG 57.557 34.615 7.68 0.00 41.74 2.90
7104 7849 3.816118 GCTAGAGATGCTCTAAGGCCCTA 60.816 52.174 0.00 0.00 41.74 3.53
7128 7873 2.489722 GGTCGGGGTATTATACGGAGTC 59.510 54.545 0.00 0.00 43.93 3.36
7130 7875 1.821136 GGGTCGGGGTATTATACGGAG 59.179 57.143 0.00 0.00 0.00 4.63
7131 7876 1.886222 CGGGTCGGGGTATTATACGGA 60.886 57.143 0.00 0.00 0.00 4.69
7132 7877 0.527565 CGGGTCGGGGTATTATACGG 59.472 60.000 0.00 0.00 0.00 4.02
7141 7886 0.961857 GTTATTTTGCGGGTCGGGGT 60.962 55.000 0.00 0.00 0.00 4.95
7191 7936 2.160615 CGTTTACATTGTCGATTGGGCA 59.839 45.455 0.00 0.00 0.00 5.36
7193 7938 3.187637 ACACGTTTACATTGTCGATTGGG 59.812 43.478 3.70 0.00 0.00 4.12
7239 7985 2.007608 GGAGGTGAGATTTTACGGCAC 58.992 52.381 0.00 0.00 0.00 5.01
7240 7986 1.626321 TGGAGGTGAGATTTTACGGCA 59.374 47.619 0.00 0.00 0.00 5.69
7243 7989 3.007635 GGGTTGGAGGTGAGATTTTACG 58.992 50.000 0.00 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.