Multiple sequence alignment - TraesCS4D01G064200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G064200 chr4D 100.000 6091 0 0 1 6091 39414895 39408805 0.000000e+00 11249.0
1 TraesCS4D01G064200 chr4D 75.775 516 108 12 84 593 459387420 459387924 1.700000e-60 244.0
2 TraesCS4D01G064200 chr4D 94.915 118 6 0 3457 3574 105237924 105237807 1.040000e-42 185.0
3 TraesCS4D01G064200 chr4D 93.846 65 4 0 557 621 39414277 39414213 1.400000e-16 99.0
4 TraesCS4D01G064200 chr4D 93.846 65 4 0 619 683 39414339 39414275 1.400000e-16 99.0
5 TraesCS4D01G064200 chr4D 78.667 150 25 6 375 521 417418719 417418864 6.500000e-15 93.5
6 TraesCS4D01G064200 chr4D 100.000 30 0 0 289 318 460568427 460568398 8.530000e-04 56.5
7 TraesCS4D01G064200 chr4A 91.122 2309 108 27 837 3107 560901114 560903363 0.000000e+00 3038.0
8 TraesCS4D01G064200 chr4A 97.319 858 16 5 4219 5075 560904528 560905379 0.000000e+00 1450.0
9 TraesCS4D01G064200 chr4A 88.846 1040 55 25 5077 6090 560905531 560906535 0.000000e+00 1221.0
10 TraesCS4D01G064200 chr4A 98.533 409 6 0 3707 4115 560904121 560904529 0.000000e+00 723.0
11 TraesCS4D01G064200 chr4A 92.994 471 33 0 1 471 560891567 560892037 0.000000e+00 688.0
12 TraesCS4D01G064200 chr4A 94.602 352 17 2 3107 3458 560903466 560903815 1.490000e-150 544.0
13 TraesCS4D01G064200 chr4A 90.367 218 20 1 629 845 560896698 560896915 9.990000e-73 285.0
14 TraesCS4D01G064200 chr4A 74.721 538 114 17 89 616 433710594 433710069 2.860000e-53 220.0
15 TraesCS4D01G064200 chr4A 89.873 158 8 3 471 621 560896596 560896752 4.820000e-46 196.0
16 TraesCS4D01G064200 chr4A 95.000 120 6 0 3458 3577 702148793 702148912 8.060000e-44 189.0
17 TraesCS4D01G064200 chr4A 94.262 122 6 1 4113 4234 67987330 67987450 1.040000e-42 185.0
18 TraesCS4D01G064200 chr4B 88.112 2532 170 49 619 3054 57869244 57866748 0.000000e+00 2887.0
19 TraesCS4D01G064200 chr4B 90.960 885 35 14 5216 6091 57864685 57863837 0.000000e+00 1149.0
20 TraesCS4D01G064200 chr4B 88.826 877 64 21 4223 5075 57865919 57865053 0.000000e+00 1046.0
21 TraesCS4D01G064200 chr4B 93.248 622 38 3 1 621 57869798 57869180 0.000000e+00 913.0
22 TraesCS4D01G064200 chr4B 97.304 408 11 0 3707 4114 57866335 57865928 0.000000e+00 693.0
23 TraesCS4D01G064200 chr4B 90.024 411 29 8 3050 3458 57866789 57866389 7.000000e-144 521.0
24 TraesCS4D01G064200 chr4B 95.763 118 5 0 4114 4231 438827633 438827516 2.240000e-44 191.0
25 TraesCS4D01G064200 chr1D 74.261 575 123 21 53 616 17049517 17050077 1.030000e-52 219.0
26 TraesCS4D01G064200 chr1D 93.548 124 8 0 3454 3577 408872399 408872522 1.040000e-42 185.0
27 TraesCS4D01G064200 chr1D 86.813 91 9 2 3625 3713 356862395 356862306 1.400000e-16 99.0
28 TraesCS4D01G064200 chr1D 81.250 96 18 0 223 318 272537555 272537460 1.820000e-10 78.7
29 TraesCS4D01G064200 chr1D 78.495 93 20 0 226 318 462364318 462364226 1.830000e-05 62.1
30 TraesCS4D01G064200 chr2D 98.305 118 2 0 3457 3574 523633180 523633297 2.230000e-49 207.0
31 TraesCS4D01G064200 chr2D 94.118 119 6 1 4114 4232 288817569 288817686 4.850000e-41 180.0
32 TraesCS4D01G064200 chr2D 77.404 208 43 3 287 492 6432841 6432636 2.980000e-23 121.0
33 TraesCS4D01G064200 chr6B 97.521 121 2 1 4114 4233 126722440 126722320 8.000000e-49 206.0
34 TraesCS4D01G064200 chr6B 94.262 122 5 2 4107 4228 1158259 1158140 1.040000e-42 185.0
35 TraesCS4D01G064200 chr6B 73.500 400 69 28 223 616 287155714 287155346 3.860000e-22 117.0
36 TraesCS4D01G064200 chr5D 98.291 117 2 0 3458 3574 441256438 441256322 8.000000e-49 206.0
37 TraesCS4D01G064200 chr5D 86.486 111 12 2 3601 3709 373214697 373214806 1.070000e-22 119.0
38 TraesCS4D01G064200 chr5D 88.421 95 8 2 3626 3717 342698211 342698117 1.790000e-20 111.0
39 TraesCS4D01G064200 chr5D 100.000 28 0 0 476 503 428828386 428828413 1.100000e-02 52.8
40 TraesCS4D01G064200 chrUn 97.436 117 3 0 3458 3574 30022471 30022355 3.720000e-47 200.0
41 TraesCS4D01G064200 chrUn 92.800 125 9 0 3450 3574 284430849 284430973 1.350000e-41 182.0
42 TraesCS4D01G064200 chrUn 77.273 242 44 11 287 525 101254558 101254325 1.380000e-26 132.0
43 TraesCS4D01G064200 chrUn 71.875 256 55 12 68 318 331543738 331543495 2.370000e-04 58.4
44 TraesCS4D01G064200 chr2B 97.345 113 3 0 4114 4226 63938250 63938362 6.230000e-45 193.0
45 TraesCS4D01G064200 chr2B 94.915 118 6 0 3458 3575 723434233 723434350 1.040000e-42 185.0
46 TraesCS4D01G064200 chr2B 91.765 85 5 1 3626 3708 28631536 28631620 3.860000e-22 117.0
47 TraesCS4D01G064200 chr2B 86.458 96 9 4 3616 3708 667419368 667419274 1.080000e-17 102.0
48 TraesCS4D01G064200 chr2B 88.889 54 4 1 3613 3664 46506510 46506563 1.420000e-06 65.8
49 TraesCS4D01G064200 chr7B 96.522 115 3 1 4114 4228 316313684 316313797 8.060000e-44 189.0
50 TraesCS4D01G064200 chr7A 95.000 120 5 1 4114 4233 627505438 627505320 2.900000e-43 187.0
51 TraesCS4D01G064200 chr7A 90.909 88 6 1 3626 3711 192669494 192669407 3.860000e-22 117.0
52 TraesCS4D01G064200 chr7A 84.375 96 9 2 3616 3709 561620724 561620815 8.410000e-14 89.8
53 TraesCS4D01G064200 chr3A 74.375 480 100 14 33 503 599979915 599980380 3.750000e-42 183.0
54 TraesCS4D01G064200 chr3A 91.765 85 5 2 3626 3708 75408054 75407970 3.860000e-22 117.0
55 TraesCS4D01G064200 chr3A 83.333 96 16 0 223 318 430979668 430979763 8.410000e-14 89.8
56 TraesCS4D01G064200 chr1A 91.045 134 9 3 4114 4247 296455410 296455540 1.740000e-40 178.0
57 TraesCS4D01G064200 chr1A 72.544 397 79 23 223 616 292814660 292815029 1.080000e-17 102.0
58 TraesCS4D01G064200 chr1A 71.373 510 107 30 114 616 357124891 357124414 5.030000e-16 97.1
59 TraesCS4D01G064200 chr1A 76.923 156 33 3 180 333 520869544 520869698 1.090000e-12 86.1
60 TraesCS4D01G064200 chr1A 73.272 217 50 6 291 503 505132528 505132316 8.470000e-09 73.1
61 TraesCS4D01G064200 chr3D 90.299 134 11 1 3446 3579 499633593 499633724 2.260000e-39 174.0
62 TraesCS4D01G064200 chr3D 74.797 369 82 10 227 588 598487725 598488089 8.170000e-34 156.0
63 TraesCS4D01G064200 chr3D 71.913 413 96 17 53 458 590232253 590232652 1.080000e-17 102.0
64 TraesCS4D01G064200 chr3D 83.929 112 12 5 3599 3708 613838111 613838004 1.080000e-17 102.0
65 TraesCS4D01G064200 chr3D 73.021 341 69 18 224 555 401892548 401892222 1.400000e-16 99.0
66 TraesCS4D01G064200 chr7D 73.022 556 114 28 67 616 136414328 136414853 4.890000e-36 163.0
67 TraesCS4D01G064200 chr7D 77.419 248 44 10 75 318 480042060 480042299 2.960000e-28 137.0
68 TraesCS4D01G064200 chr7D 92.045 88 5 1 3626 3711 6744965 6744878 8.290000e-24 122.0
69 TraesCS4D01G064200 chr7D 85.417 96 11 2 3616 3709 588680012 588679918 5.030000e-16 97.1
70 TraesCS4D01G064200 chr6A 74.436 399 91 9 224 616 133311307 133310914 1.760000e-35 161.0
71 TraesCS4D01G064200 chr6A 73.387 248 58 7 376 619 49852014 49851771 1.090000e-12 86.1
72 TraesCS4D01G064200 chr5B 74.010 404 87 13 221 614 19046276 19045881 1.370000e-31 148.0
73 TraesCS4D01G064200 chr5B 91.954 87 5 1 3625 3709 246182624 246182710 2.980000e-23 121.0
74 TraesCS4D01G064200 chr5A 74.251 334 69 11 287 614 547660852 547660530 2.310000e-24 124.0
75 TraesCS4D01G064200 chr5A 87.838 74 9 0 620 693 456080037 456079964 3.020000e-13 87.9
76 TraesCS4D01G064200 chr6D 93.750 80 5 0 3629 3708 140086860 140086939 2.980000e-23 121.0
77 TraesCS4D01G064200 chr6D 74.790 238 55 4 382 616 471483842 471484077 1.080000e-17 102.0
78 TraesCS4D01G064200 chr6D 79.787 94 14 4 632 724 342464464 342464553 5.100000e-06 63.9
79 TraesCS4D01G064200 chr1B 73.067 401 85 14 226 616 619104919 619104532 2.980000e-23 121.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G064200 chr4D 39408805 39414895 6090 True 3815.666667 11249 95.897333 1 6091 3 chr4D.!!$R3 6090
1 TraesCS4D01G064200 chr4D 459387420 459387924 504 False 244.000000 244 75.775000 84 593 1 chr4D.!!$F2 509
2 TraesCS4D01G064200 chr4A 560901114 560906535 5421 False 1395.200000 3038 94.084400 837 6090 5 chr4A.!!$F5 5253
3 TraesCS4D01G064200 chr4A 433710069 433710594 525 True 220.000000 220 74.721000 89 616 1 chr4A.!!$R1 527
4 TraesCS4D01G064200 chr4B 57863837 57869798 5961 True 1201.500000 2887 91.412333 1 6091 6 chr4B.!!$R2 6090
5 TraesCS4D01G064200 chr1D 17049517 17050077 560 False 219.000000 219 74.261000 53 616 1 chr1D.!!$F1 563

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
800 809 0.039256 CGCCACCATGTCAAACCAAG 60.039 55.0 0.00 0.0 0.00 3.61 F
1654 1695 0.239347 ATCGAGTTTGCTGTGCTTGC 59.761 50.0 0.00 0.0 0.00 4.01 F
2230 2316 0.746563 TAAATGCTAGGCACCACCGC 60.747 55.0 0.00 0.0 43.04 5.68 F
3477 3704 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.0 5.23 0.0 44.66 1.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1827 1881 1.067295 AGCAACAGAACAGGGATGGA 58.933 50.0 0.00 0.00 0.00 3.41 R
3458 3685 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.0 13.64 0.00 46.06 3.85 R
3460 3687 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.0 13.64 4.95 46.06 4.20 R
5372 6106 0.460109 GCCCGATTGGATTGCAAACC 60.460 55.0 18.32 18.32 37.49 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
131 132 3.739613 GTGGATCCCGGCCCCTTT 61.740 66.667 9.90 0.00 0.00 3.11
166 167 4.781071 CTCATGCTTTGTCTTCAAGTGTC 58.219 43.478 0.00 0.00 34.88 3.67
197 199 5.358090 TCTGTTTACGGTTTGTGTCATGTA 58.642 37.500 0.00 0.00 0.00 2.29
220 222 0.321653 GAAGTTGAGGTGGCGATGGT 60.322 55.000 0.00 0.00 0.00 3.55
237 241 5.296780 GCGATGGTTCTGAAGATGGAATAAA 59.703 40.000 0.00 0.00 0.00 1.40
372 377 1.588932 GCGTGCATCCGATCTTCGA 60.589 57.895 0.24 0.00 43.74 3.71
373 378 1.812214 GCGTGCATCCGATCTTCGAC 61.812 60.000 0.24 0.00 43.74 4.20
423 428 4.583489 GGATCCGTTCAATCTACACCTCTA 59.417 45.833 0.00 0.00 0.00 2.43
450 456 0.381089 CGGCGGTTGTTGTTTTGGTA 59.619 50.000 0.00 0.00 0.00 3.25
507 513 3.701542 TCTGACTGGCTACTACAATGAGG 59.298 47.826 0.00 0.00 0.00 3.86
527 534 2.409975 GTTTGTCCGACTCCGATGAAA 58.590 47.619 0.00 0.00 38.22 2.69
533 541 2.561419 TCCGACTCCGATGAAAAAGAGT 59.439 45.455 0.00 0.00 42.15 3.24
543 551 4.862574 CGATGAAAAAGAGTGATGACGGTA 59.137 41.667 0.00 0.00 0.00 4.02
576 584 3.936372 TTCGCTCTAGTGCTTGTAGTT 57.064 42.857 14.40 0.00 0.00 2.24
581 589 3.612004 GCTCTAGTGCTTGTAGTTGTCGT 60.612 47.826 9.52 0.00 0.00 4.34
599 607 5.845103 TGTCGTTAGGTGATCTACAAACAA 58.155 37.500 0.00 0.00 30.98 2.83
622 631 9.072294 ACAAGTATGTAATTTTTATTGCTTCGC 57.928 29.630 0.00 0.00 38.24 4.70
623 632 9.289303 CAAGTATGTAATTTTTATTGCTTCGCT 57.711 29.630 0.00 0.00 0.00 4.93
624 633 9.503427 AAGTATGTAATTTTTATTGCTTCGCTC 57.497 29.630 0.00 0.00 0.00 5.03
625 634 8.673711 AGTATGTAATTTTTATTGCTTCGCTCA 58.326 29.630 0.00 0.00 0.00 4.26
626 635 9.284594 GTATGTAATTTTTATTGCTTCGCTCAA 57.715 29.630 0.00 0.00 0.00 3.02
627 636 7.795431 TGTAATTTTTATTGCTTCGCTCAAG 57.205 32.000 0.00 0.00 34.85 3.02
628 637 7.367285 TGTAATTTTTATTGCTTCGCTCAAGT 58.633 30.769 0.00 0.00 34.13 3.16
629 638 6.695292 AATTTTTATTGCTTCGCTCAAGTG 57.305 33.333 0.00 0.00 34.13 3.16
630 639 4.829064 TTTTATTGCTTCGCTCAAGTGT 57.171 36.364 0.00 0.00 34.13 3.55
631 640 4.829064 TTTATTGCTTCGCTCAAGTGTT 57.171 36.364 0.00 0.00 34.13 3.32
632 641 4.829064 TTATTGCTTCGCTCAAGTGTTT 57.171 36.364 0.00 0.00 34.13 2.83
633 642 2.473530 TTGCTTCGCTCAAGTGTTTG 57.526 45.000 0.00 0.00 34.13 2.93
634 643 1.378531 TGCTTCGCTCAAGTGTTTGT 58.621 45.000 0.00 0.00 35.73 2.83
635 644 2.556257 TGCTTCGCTCAAGTGTTTGTA 58.444 42.857 0.00 0.00 35.73 2.41
636 645 2.543848 TGCTTCGCTCAAGTGTTTGTAG 59.456 45.455 0.00 0.00 35.73 2.74
637 646 2.544267 GCTTCGCTCAAGTGTTTGTAGT 59.456 45.455 0.00 0.00 35.73 2.73
638 647 3.363084 GCTTCGCTCAAGTGTTTGTAGTC 60.363 47.826 0.00 0.00 35.73 2.59
639 648 2.390938 TCGCTCAAGTGTTTGTAGTCG 58.609 47.619 0.00 0.00 35.73 4.18
640 649 2.124903 CGCTCAAGTGTTTGTAGTCGT 58.875 47.619 0.00 0.00 35.73 4.34
641 650 2.153247 CGCTCAAGTGTTTGTAGTCGTC 59.847 50.000 0.00 0.00 35.73 4.20
642 651 2.153247 GCTCAAGTGTTTGTAGTCGTCG 59.847 50.000 0.00 0.00 35.73 5.12
643 652 3.369385 CTCAAGTGTTTGTAGTCGTCGT 58.631 45.455 0.00 0.00 35.73 4.34
644 653 3.772932 TCAAGTGTTTGTAGTCGTCGTT 58.227 40.909 0.00 0.00 35.73 3.85
645 654 4.919206 TCAAGTGTTTGTAGTCGTCGTTA 58.081 39.130 0.00 0.00 35.73 3.18
646 655 5.522456 TCAAGTGTTTGTAGTCGTCGTTAT 58.478 37.500 0.00 0.00 35.73 1.89
647 656 5.400188 TCAAGTGTTTGTAGTCGTCGTTATG 59.600 40.000 0.00 0.00 35.73 1.90
648 657 4.863491 AGTGTTTGTAGTCGTCGTTATGT 58.137 39.130 0.00 0.00 0.00 2.29
649 658 4.678287 AGTGTTTGTAGTCGTCGTTATGTG 59.322 41.667 0.00 0.00 0.00 3.21
650 659 4.676471 GTGTTTGTAGTCGTCGTTATGTGA 59.324 41.667 0.00 0.00 0.00 3.58
651 660 5.344128 GTGTTTGTAGTCGTCGTTATGTGAT 59.656 40.000 0.00 0.00 0.00 3.06
652 661 5.570206 TGTTTGTAGTCGTCGTTATGTGATC 59.430 40.000 0.00 0.00 0.00 2.92
653 662 5.556355 TTGTAGTCGTCGTTATGTGATCT 57.444 39.130 0.00 0.00 0.00 2.75
654 663 6.667007 TTGTAGTCGTCGTTATGTGATCTA 57.333 37.500 0.00 0.00 0.00 1.98
655 664 6.040962 TGTAGTCGTCGTTATGTGATCTAC 57.959 41.667 0.00 0.00 0.00 2.59
656 665 5.581874 TGTAGTCGTCGTTATGTGATCTACA 59.418 40.000 0.00 0.00 44.87 2.74
657 666 5.556355 AGTCGTCGTTATGTGATCTACAA 57.444 39.130 0.00 0.00 43.77 2.41
658 667 5.946298 AGTCGTCGTTATGTGATCTACAAA 58.054 37.500 0.00 0.00 43.77 2.83
659 668 5.798934 AGTCGTCGTTATGTGATCTACAAAC 59.201 40.000 0.00 4.47 43.77 2.93
660 669 5.570206 GTCGTCGTTATGTGATCTACAAACA 59.430 40.000 0.00 0.00 43.77 2.83
661 670 6.088483 GTCGTCGTTATGTGATCTACAAACAA 59.912 38.462 0.00 0.00 43.77 2.83
662 671 6.307077 TCGTCGTTATGTGATCTACAAACAAG 59.693 38.462 0.00 1.33 43.77 3.16
663 672 6.089016 CGTCGTTATGTGATCTACAAACAAGT 59.911 38.462 0.00 0.00 43.77 3.16
664 673 7.271868 CGTCGTTATGTGATCTACAAACAAGTA 59.728 37.037 0.00 0.00 43.77 2.24
665 674 9.084164 GTCGTTATGTGATCTACAAACAAGTAT 57.916 33.333 0.00 0.00 43.77 2.12
666 675 9.083080 TCGTTATGTGATCTACAAACAAGTATG 57.917 33.333 0.00 0.00 43.77 2.39
667 676 8.869897 CGTTATGTGATCTACAAACAAGTATGT 58.130 33.333 0.00 0.00 43.77 2.29
696 705 3.878086 TTGCTTCTTGTGTTCTTAGCG 57.122 42.857 0.00 0.00 0.00 4.26
700 709 1.795768 TCTTGTGTTCTTAGCGCTGG 58.204 50.000 22.90 13.14 0.00 4.85
704 713 2.616960 TGTGTTCTTAGCGCTGGTATG 58.383 47.619 22.90 2.31 0.00 2.39
771 780 1.887707 GATGATGGCGTCGAACCCC 60.888 63.158 0.00 0.00 0.00 4.95
790 799 2.815211 CCTCACGTCGCCACCATG 60.815 66.667 0.00 0.00 0.00 3.66
791 800 2.048222 CTCACGTCGCCACCATGT 60.048 61.111 0.00 0.00 0.00 3.21
792 801 2.048597 TCACGTCGCCACCATGTC 60.049 61.111 0.00 0.00 0.00 3.06
793 802 2.356913 CACGTCGCCACCATGTCA 60.357 61.111 0.00 0.00 0.00 3.58
796 805 1.206578 CGTCGCCACCATGTCAAAC 59.793 57.895 0.00 0.00 0.00 2.93
798 807 1.149401 TCGCCACCATGTCAAACCA 59.851 52.632 0.00 0.00 0.00 3.67
800 809 0.039256 CGCCACCATGTCAAACCAAG 60.039 55.000 0.00 0.00 0.00 3.61
810 820 3.460103 TGTCAAACCAAGGAGACGTTAC 58.540 45.455 0.00 0.00 33.83 2.50
1193 1218 0.812014 TCTGCACCGTTCGCTTCAAA 60.812 50.000 0.00 0.00 0.00 2.69
1198 1223 2.538037 GCACCGTTCGCTTCAAATTTTT 59.462 40.909 0.00 0.00 0.00 1.94
1247 1272 0.749818 TTGACTTTGCCTGCGTTGGA 60.750 50.000 0.05 0.00 0.00 3.53
1296 1321 6.646240 GCCGAGGAAATATACGTTTATTGGTA 59.354 38.462 11.32 0.00 0.00 3.25
1331 1356 2.033801 CCATCGATTTGCATGTTCCCTC 59.966 50.000 0.00 0.00 0.00 4.30
1346 1371 1.377725 CCTCCAGCCGAATTGCACT 60.378 57.895 0.00 0.00 0.00 4.40
1404 1429 5.475273 AATATCTGTCGAATTGCACTGTG 57.525 39.130 2.76 2.76 0.00 3.66
1411 1436 1.987770 CGAATTGCACTGTGGAAATGC 59.012 47.619 18.52 9.79 39.88 3.56
1450 1490 4.853924 TTGAACTTTCAGAGGAATTGGC 57.146 40.909 0.00 0.00 38.61 4.52
1511 1551 2.074230 TTGTTTGCGCCCTTGCTGAG 62.074 55.000 4.18 0.00 35.36 3.35
1529 1569 2.287547 TGAGTTGAATTGCGCCAAGAAC 60.288 45.455 4.18 1.38 0.00 3.01
1561 1601 0.660595 ACTGTTCTGTCGTTCGAGCG 60.661 55.000 16.09 16.09 0.00 5.03
1582 1622 4.215613 GCGTTTAGGAAAGGGGCTAATATG 59.784 45.833 0.00 0.00 0.00 1.78
1616 1657 7.681939 TTGATCAACTTTTATTAGTTCGGCT 57.318 32.000 3.38 0.00 36.24 5.52
1617 1658 8.780846 TTGATCAACTTTTATTAGTTCGGCTA 57.219 30.769 3.38 0.00 36.24 3.93
1654 1695 0.239347 ATCGAGTTTGCTGTGCTTGC 59.761 50.000 0.00 0.00 0.00 4.01
1676 1717 4.536065 CTTGCTAAAGCGTGTCATTTTCA 58.464 39.130 0.00 0.00 45.83 2.69
1703 1744 7.432869 AGATAGATTTCAGACGATTCTTCCTG 58.567 38.462 0.00 0.00 0.00 3.86
1708 1749 3.329386 TCAGACGATTCTTCCTGCTTTG 58.671 45.455 0.00 0.00 0.00 2.77
1770 1824 6.460123 GGCGGAGTATGATTGTTTTGAATGAT 60.460 38.462 0.00 0.00 0.00 2.45
1806 1860 8.752005 TCTTATGGAGATTATCAAAGTTTGGG 57.248 34.615 15.47 0.00 0.00 4.12
1810 1864 5.476599 TGGAGATTATCAAAGTTTGGGTGTG 59.523 40.000 15.47 0.00 0.00 3.82
1827 1881 4.129380 GGTGTGTTACCTAACCGAAACTT 58.871 43.478 0.00 0.00 46.51 2.66
1856 1910 4.872691 CCTGTTCTGTTGCTATCCTTGTAG 59.127 45.833 0.00 0.00 0.00 2.74
1905 1966 6.403049 TCTGCTTGACGTTATTCCTTATTGA 58.597 36.000 0.00 0.00 0.00 2.57
1922 1983 1.141665 GAATTTGCGTGGCCATCCC 59.858 57.895 9.72 0.18 0.00 3.85
1984 2062 3.683340 GGTACGGTTCTTGATGGTTCTTC 59.317 47.826 0.00 0.00 0.00 2.87
2059 2137 6.588373 GTGGTTATACCGAATTGCACAAAAAT 59.412 34.615 0.00 0.00 42.58 1.82
2084 2162 5.411669 GGAAGTCCATTTTCTATGTTCGTGT 59.588 40.000 0.00 0.00 35.64 4.49
2085 2163 5.862924 AGTCCATTTTCTATGTTCGTGTG 57.137 39.130 0.00 0.00 0.00 3.82
2086 2164 4.154195 AGTCCATTTTCTATGTTCGTGTGC 59.846 41.667 0.00 0.00 0.00 4.57
2087 2165 4.068599 TCCATTTTCTATGTTCGTGTGCA 58.931 39.130 0.00 0.00 0.00 4.57
2145 2228 3.767673 ACTTTGAGCCTTGATGCATTGAT 59.232 39.130 0.00 0.00 0.00 2.57
2147 2230 3.007473 TGAGCCTTGATGCATTGATCA 57.993 42.857 0.00 1.99 0.00 2.92
2174 2260 2.220653 AGTTATGTGCAAGCCCATGT 57.779 45.000 0.14 0.00 0.00 3.21
2194 2280 3.648694 GGGCCAACACCCCAAAAA 58.351 55.556 4.39 0.00 45.00 1.94
2209 2295 5.894964 ACCCCAAAAATACAACACTACACTT 59.105 36.000 0.00 0.00 0.00 3.16
2230 2316 0.746563 TAAATGCTAGGCACCACCGC 60.747 55.000 0.00 0.00 43.04 5.68
2265 2351 3.582647 TGGACATACCATGAGTCAGTTGT 59.417 43.478 0.00 0.00 44.64 3.32
2272 2358 2.418976 CCATGAGTCAGTTGTGATGCAG 59.581 50.000 0.00 0.00 34.36 4.41
2310 2396 3.317149 AGGGTGATTGCATGATCAAATCG 59.683 43.478 0.00 0.00 37.75 3.34
2313 2399 3.729217 GTGATTGCATGATCAAATCGCTG 59.271 43.478 18.54 6.23 37.75 5.18
2330 2417 4.953269 TCGCTGTTTGTTAAATCATCGTC 58.047 39.130 0.00 0.00 0.00 4.20
2512 2606 2.898729 ACCATCCGCTGTAGAATCTG 57.101 50.000 0.00 0.00 0.00 2.90
2559 2653 7.588123 GCTTTTAGTTTCTAAGCTTTGTCTCAC 59.412 37.037 3.20 0.00 40.75 3.51
2875 2978 7.559590 AGCAGGACTTGATTATTAATCACAC 57.440 36.000 16.79 11.40 46.90 3.82
2897 3000 5.064707 CACGTTTAGACCACATTAATGAGGG 59.935 44.000 28.55 24.82 41.99 4.30
2923 3044 1.563111 CATTCGCAATGCCACATTCC 58.437 50.000 0.00 0.00 31.20 3.01
2974 3096 5.397142 AATTCATCTGCCTCTTTGGTTTC 57.603 39.130 0.00 0.00 38.35 2.78
2987 3109 6.313519 TCTTTGGTTTCATGTCTAGCCTAT 57.686 37.500 0.00 0.00 0.00 2.57
3043 3165 2.681848 CCTCAATCACCAATGTCTGAGC 59.318 50.000 0.00 0.00 35.77 4.26
3057 3179 3.181497 TGTCTGAGCAAAAGTTGAACAGC 60.181 43.478 0.00 0.00 36.26 4.40
3073 3195 2.996631 ACAGCTCCTCAATCACCAATC 58.003 47.619 0.00 0.00 0.00 2.67
3130 3356 7.849804 AATAGTACGGAAATATGGATCATGC 57.150 36.000 0.00 0.00 0.00 4.06
3206 3432 1.472376 GCAGTCTGGCTCTGGTACATC 60.472 57.143 1.14 0.00 38.20 3.06
3216 3442 4.023878 GGCTCTGGTACATCTTACTAGTCG 60.024 50.000 0.00 0.00 38.20 4.18
3323 3549 5.532406 AGCTCTTGATGTTTGCTTGTTTAGA 59.468 36.000 0.00 0.00 0.00 2.10
3462 3689 7.963532 TCCTGGTACAAAATCATATCTACTCC 58.036 38.462 0.00 0.00 38.70 3.85
3463 3690 7.016268 TCCTGGTACAAAATCATATCTACTCCC 59.984 40.741 0.00 0.00 38.70 4.30
3464 3691 7.016661 CCTGGTACAAAATCATATCTACTCCCT 59.983 40.741 0.00 0.00 38.70 4.20
3465 3692 7.963532 TGGTACAAAATCATATCTACTCCCTC 58.036 38.462 0.00 0.00 31.92 4.30
3466 3693 7.016268 TGGTACAAAATCATATCTACTCCCTCC 59.984 40.741 0.00 0.00 31.92 4.30
3467 3694 6.102897 ACAAAATCATATCTACTCCCTCCG 57.897 41.667 0.00 0.00 0.00 4.63
3468 3695 5.602978 ACAAAATCATATCTACTCCCTCCGT 59.397 40.000 0.00 0.00 0.00 4.69
3469 3696 5.986501 AAATCATATCTACTCCCTCCGTC 57.013 43.478 0.00 0.00 0.00 4.79
3470 3697 3.436577 TCATATCTACTCCCTCCGTCC 57.563 52.381 0.00 0.00 0.00 4.79
3471 3698 2.085320 CATATCTACTCCCTCCGTCCG 58.915 57.143 0.00 0.00 0.00 4.79
3472 3699 0.399454 TATCTACTCCCTCCGTCCGG 59.601 60.000 0.00 0.00 0.00 5.14
3473 3700 1.351080 ATCTACTCCCTCCGTCCGGA 61.351 60.000 0.00 0.00 42.90 5.14
3474 3701 1.077212 CTACTCCCTCCGTCCGGAA 60.077 63.158 5.23 0.00 44.66 4.30
3475 3702 0.682209 CTACTCCCTCCGTCCGGAAA 60.682 60.000 5.23 0.00 44.66 3.13
3476 3703 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
3477 3704 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
3478 3705 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
3479 3706 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
3480 3707 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
3481 3708 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
3482 3709 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
3483 3710 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
3484 3711 1.135315 TCCGTCCGGAAATACTTGTCG 60.135 52.381 5.23 1.25 42.05 4.35
3485 3712 1.274596 CGTCCGGAAATACTTGTCGG 58.725 55.000 5.23 0.00 41.80 4.79
3486 3713 1.135315 CGTCCGGAAATACTTGTCGGA 60.135 52.381 5.23 0.00 46.06 4.55
3487 3714 2.953466 TCCGGAAATACTTGTCGGAG 57.047 50.000 0.00 0.00 43.84 4.63
3488 3715 2.449464 TCCGGAAATACTTGTCGGAGA 58.551 47.619 0.00 0.00 43.84 3.71
3489 3716 2.827322 TCCGGAAATACTTGTCGGAGAA 59.173 45.455 0.00 0.00 43.84 2.87
3490 3717 3.258872 TCCGGAAATACTTGTCGGAGAAA 59.741 43.478 0.00 0.00 43.84 2.52
3491 3718 4.081309 TCCGGAAATACTTGTCGGAGAAAT 60.081 41.667 0.00 0.00 43.84 2.17
3492 3719 4.034048 CCGGAAATACTTGTCGGAGAAATG 59.966 45.833 0.00 0.00 42.94 2.32
3493 3720 4.868171 CGGAAATACTTGTCGGAGAAATGA 59.132 41.667 0.00 0.00 39.69 2.57
3494 3721 5.350365 CGGAAATACTTGTCGGAGAAATGAA 59.650 40.000 0.00 0.00 39.69 2.57
3495 3722 6.037172 CGGAAATACTTGTCGGAGAAATGAAT 59.963 38.462 0.00 0.00 39.69 2.57
3496 3723 7.189512 GGAAATACTTGTCGGAGAAATGAATG 58.810 38.462 0.00 0.00 39.69 2.67
3497 3724 7.148239 GGAAATACTTGTCGGAGAAATGAATGT 60.148 37.037 0.00 0.00 39.69 2.71
3498 3725 8.786826 AAATACTTGTCGGAGAAATGAATGTA 57.213 30.769 0.00 0.00 39.69 2.29
3499 3726 8.964476 AATACTTGTCGGAGAAATGAATGTAT 57.036 30.769 0.00 0.00 39.69 2.29
3500 3727 6.910536 ACTTGTCGGAGAAATGAATGTATC 57.089 37.500 0.00 0.00 39.69 2.24
3501 3728 6.644347 ACTTGTCGGAGAAATGAATGTATCT 58.356 36.000 0.00 0.00 39.69 1.98
3502 3729 7.782049 ACTTGTCGGAGAAATGAATGTATCTA 58.218 34.615 0.00 0.00 39.69 1.98
3503 3730 7.923344 ACTTGTCGGAGAAATGAATGTATCTAG 59.077 37.037 0.00 0.00 39.69 2.43
3504 3731 7.582667 TGTCGGAGAAATGAATGTATCTAGA 57.417 36.000 0.00 0.00 39.69 2.43
3505 3732 7.426410 TGTCGGAGAAATGAATGTATCTAGAC 58.574 38.462 0.00 0.00 39.69 2.59
3506 3733 7.068226 TGTCGGAGAAATGAATGTATCTAGACA 59.932 37.037 0.00 0.00 39.69 3.41
3507 3734 7.380065 GTCGGAGAAATGAATGTATCTAGACAC 59.620 40.741 0.00 0.00 39.69 3.67
3508 3735 7.068226 TCGGAGAAATGAATGTATCTAGACACA 59.932 37.037 6.26 6.26 30.52 3.72
3509 3736 7.869937 CGGAGAAATGAATGTATCTAGACACAT 59.130 37.037 10.93 10.93 36.96 3.21
3510 3737 9.553064 GGAGAAATGAATGTATCTAGACACATT 57.447 33.333 25.62 25.62 45.60 2.71
3528 3755 9.073475 AGACACATTCTAGTTCTAGATACATCC 57.927 37.037 9.88 1.38 30.17 3.51
3529 3756 8.768501 ACACATTCTAGTTCTAGATACATCCA 57.231 34.615 9.88 0.00 0.00 3.41
3530 3757 9.373450 ACACATTCTAGTTCTAGATACATCCAT 57.627 33.333 9.88 0.00 0.00 3.41
3548 3775 8.827832 ACATCCATTTTTATCCATTTCTCTGA 57.172 30.769 0.00 0.00 0.00 3.27
3549 3776 8.689972 ACATCCATTTTTATCCATTTCTCTGAC 58.310 33.333 0.00 0.00 0.00 3.51
3550 3777 8.689061 CATCCATTTTTATCCATTTCTCTGACA 58.311 33.333 0.00 0.00 0.00 3.58
3551 3778 8.648698 TCCATTTTTATCCATTTCTCTGACAA 57.351 30.769 0.00 0.00 0.00 3.18
3552 3779 8.742777 TCCATTTTTATCCATTTCTCTGACAAG 58.257 33.333 0.00 0.00 0.00 3.16
3553 3780 8.526147 CCATTTTTATCCATTTCTCTGACAAGT 58.474 33.333 0.00 0.00 0.00 3.16
3560 3787 7.364522 TCCATTTCTCTGACAAGTATTTTCG 57.635 36.000 0.00 0.00 0.00 3.46
3561 3788 6.371548 TCCATTTCTCTGACAAGTATTTTCGG 59.628 38.462 0.00 0.00 0.00 4.30
3562 3789 6.371548 CCATTTCTCTGACAAGTATTTTCGGA 59.628 38.462 0.00 0.00 0.00 4.55
3563 3790 6.780706 TTTCTCTGACAAGTATTTTCGGAC 57.219 37.500 0.00 0.00 0.00 4.79
3564 3791 4.482386 TCTCTGACAAGTATTTTCGGACG 58.518 43.478 0.00 0.00 0.00 4.79
3565 3792 3.581755 TCTGACAAGTATTTTCGGACGG 58.418 45.455 0.00 0.00 0.00 4.79
3566 3793 3.256383 TCTGACAAGTATTTTCGGACGGA 59.744 43.478 0.00 0.00 0.00 4.69
3567 3794 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
3568 3795 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
3569 3796 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
3570 3797 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
3571 3798 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
3572 3799 1.479730 GTATTTTCGGACGGAGGGAGT 59.520 52.381 0.00 0.00 0.00 3.85
3573 3800 1.856629 ATTTTCGGACGGAGGGAGTA 58.143 50.000 0.00 0.00 0.00 2.59
3633 3863 9.793259 TGTGGATTATTTATTTCATACTCCCTC 57.207 33.333 0.00 0.00 28.92 4.30
3683 3913 6.448207 ACTACCTTAGTGATCTAAACGGTC 57.552 41.667 0.00 0.00 36.63 4.79
3684 3914 6.186234 ACTACCTTAGTGATCTAAACGGTCT 58.814 40.000 0.00 0.00 36.63 3.85
3688 3918 8.757982 ACCTTAGTGATCTAAACGGTCTTATA 57.242 34.615 0.00 0.00 32.68 0.98
3689 3919 9.364653 ACCTTAGTGATCTAAACGGTCTTATAT 57.635 33.333 0.00 0.00 32.68 0.86
3702 3932 7.982371 ACGGTCTTATATTTCTTTACAGACG 57.018 36.000 0.00 0.00 31.71 4.18
3703 3933 6.976925 ACGGTCTTATATTTCTTTACAGACGG 59.023 38.462 0.00 0.00 36.63 4.79
3704 3934 7.148018 ACGGTCTTATATTTCTTTACAGACGGA 60.148 37.037 9.99 0.00 35.34 4.69
3782 4181 0.178990 GGACAGTTTGCTGGAAGGGT 60.179 55.000 0.00 0.00 46.62 4.34
3988 4387 4.846779 TCCTAGTTGTCAAAATTGTGGC 57.153 40.909 0.00 0.00 0.00 5.01
3993 4392 3.119316 AGTTGTCAAAATTGTGGCGTCAA 60.119 39.130 0.00 0.00 0.00 3.18
4115 4514 2.162681 AGCAACCTTGATGCCTGTTAC 58.837 47.619 0.00 0.00 44.91 2.50
4116 4515 2.162681 GCAACCTTGATGCCTGTTACT 58.837 47.619 0.00 0.00 37.85 2.24
4117 4516 2.162408 GCAACCTTGATGCCTGTTACTC 59.838 50.000 0.00 0.00 37.85 2.59
4118 4517 2.749621 CAACCTTGATGCCTGTTACTCC 59.250 50.000 0.00 0.00 0.00 3.85
4119 4518 1.282157 ACCTTGATGCCTGTTACTCCC 59.718 52.381 0.00 0.00 0.00 4.30
4120 4519 1.561542 CCTTGATGCCTGTTACTCCCT 59.438 52.381 0.00 0.00 0.00 4.20
4121 4520 2.420687 CCTTGATGCCTGTTACTCCCTC 60.421 54.545 0.00 0.00 0.00 4.30
4122 4521 1.204146 TGATGCCTGTTACTCCCTCC 58.796 55.000 0.00 0.00 0.00 4.30
4123 4522 0.105039 GATGCCTGTTACTCCCTCCG 59.895 60.000 0.00 0.00 0.00 4.63
4124 4523 0.617820 ATGCCTGTTACTCCCTCCGT 60.618 55.000 0.00 0.00 0.00 4.69
4125 4524 1.255667 TGCCTGTTACTCCCTCCGTC 61.256 60.000 0.00 0.00 0.00 4.79
4126 4525 1.957765 GCCTGTTACTCCCTCCGTCC 61.958 65.000 0.00 0.00 0.00 4.79
4127 4526 1.664321 CCTGTTACTCCCTCCGTCCG 61.664 65.000 0.00 0.00 0.00 4.79
4128 4527 1.664321 CTGTTACTCCCTCCGTCCGG 61.664 65.000 0.00 0.00 0.00 5.14
4129 4528 1.379044 GTTACTCCCTCCGTCCGGA 60.379 63.158 0.00 0.00 42.90 5.14
4130 4529 0.967380 GTTACTCCCTCCGTCCGGAA 60.967 60.000 5.23 0.00 44.66 4.30
4131 4530 0.251742 TTACTCCCTCCGTCCGGAAA 60.252 55.000 5.23 0.00 44.66 3.13
4132 4531 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
4133 4532 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
4134 4533 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
4135 4534 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
4136 4535 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
4137 4536 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
4138 4537 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
4139 4538 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
4140 4539 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
4141 4540 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
4142 4541 3.055675 TCCGTCCGGAAATACTTGTCATT 60.056 43.478 5.23 0.00 42.05 2.57
4143 4542 3.063452 CCGTCCGGAAATACTTGTCATTG 59.937 47.826 5.23 0.00 37.50 2.82
4144 4543 3.930229 CGTCCGGAAATACTTGTCATTGA 59.070 43.478 5.23 0.00 0.00 2.57
4145 4544 4.390603 CGTCCGGAAATACTTGTCATTGAA 59.609 41.667 5.23 0.00 0.00 2.69
4146 4545 5.106869 CGTCCGGAAATACTTGTCATTGAAA 60.107 40.000 5.23 0.00 0.00 2.69
4147 4546 6.403200 CGTCCGGAAATACTTGTCATTGAAAT 60.403 38.462 5.23 0.00 0.00 2.17
4148 4547 6.747280 GTCCGGAAATACTTGTCATTGAAATG 59.253 38.462 5.23 0.00 37.75 2.32
4149 4548 6.035843 CCGGAAATACTTGTCATTGAAATGG 58.964 40.000 0.00 0.00 37.03 3.16
4150 4549 6.127758 CCGGAAATACTTGTCATTGAAATGGA 60.128 38.462 0.00 0.00 37.03 3.41
4151 4550 7.416664 CCGGAAATACTTGTCATTGAAATGGAT 60.417 37.037 0.00 0.00 37.03 3.41
4152 4551 7.433131 CGGAAATACTTGTCATTGAAATGGATG 59.567 37.037 3.31 0.00 37.03 3.51
4153 4552 8.253113 GGAAATACTTGTCATTGAAATGGATGT 58.747 33.333 3.31 2.77 37.03 3.06
4157 4556 9.857656 ATACTTGTCATTGAAATGGATGTATCT 57.142 29.630 3.31 0.00 37.03 1.98
4159 4558 9.334947 ACTTGTCATTGAAATGGATGTATCTAG 57.665 33.333 3.31 0.00 37.03 2.43
4160 4559 9.551734 CTTGTCATTGAAATGGATGTATCTAGA 57.448 33.333 0.00 0.00 37.03 2.43
4162 4561 9.498176 TGTCATTGAAATGGATGTATCTAGATG 57.502 33.333 15.79 0.00 37.03 2.90
4163 4562 9.499479 GTCATTGAAATGGATGTATCTAGATGT 57.501 33.333 15.79 1.25 37.03 3.06
4195 4594 9.553064 AGTTCTAGATACATCCATTTTGATGAC 57.447 33.333 7.93 0.44 43.94 3.06
4196 4595 9.330063 GTTCTAGATACATCCATTTTGATGACA 57.670 33.333 7.93 0.00 43.94 3.58
4197 4596 9.904198 TTCTAGATACATCCATTTTGATGACAA 57.096 29.630 7.93 0.00 43.94 3.18
4198 4597 9.551734 TCTAGATACATCCATTTTGATGACAAG 57.448 33.333 7.93 0.00 43.94 3.16
4199 4598 9.334947 CTAGATACATCCATTTTGATGACAAGT 57.665 33.333 7.93 0.00 43.94 3.16
4201 4600 9.685276 AGATACATCCATTTTGATGACAAGTAA 57.315 29.630 7.93 0.00 43.94 2.24
4205 4604 8.253113 ACATCCATTTTGATGACAAGTAATTCC 58.747 33.333 7.93 0.00 43.94 3.01
4206 4605 6.851609 TCCATTTTGATGACAAGTAATTCCG 58.148 36.000 0.00 0.00 37.32 4.30
4207 4606 6.035843 CCATTTTGATGACAAGTAATTCCGG 58.964 40.000 0.00 0.00 37.32 5.14
4208 4607 6.127758 CCATTTTGATGACAAGTAATTCCGGA 60.128 38.462 0.00 0.00 37.32 5.14
4209 4608 5.873179 TTTGATGACAAGTAATTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
4210 4609 3.517602 TGATGACAAGTAATTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
4211 4610 2.373540 TGACAAGTAATTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
4212 4611 1.894466 TGACAAGTAATTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
4213 4612 2.094390 TGACAAGTAATTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
4214 4613 1.206371 ACAAGTAATTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
4215 4614 0.828677 AAGTAATTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
4216 4615 0.032813 AGTAATTCCGGACGGAGGGA 60.033 55.000 13.64 0.00 46.06 4.20
4217 4616 0.388294 GTAATTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
4218 4617 0.032813 TAATTCCGGACGGAGGGAGT 60.033 55.000 13.64 1.45 46.06 3.85
4219 4618 0.032813 AATTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
4220 4619 0.187851 ATTCCGGACGGAGGGAGTAT 59.812 55.000 13.64 0.61 46.06 2.12
4221 4620 0.754217 TTCCGGACGGAGGGAGTATG 60.754 60.000 13.64 0.00 46.06 2.39
4222 4621 1.455217 CCGGACGGAGGGAGTATGT 60.455 63.158 4.40 0.00 37.50 2.29
4283 4697 5.795441 GCGTGAATCTAACCAAATTCTTCAC 59.205 40.000 0.00 0.00 38.27 3.18
4740 5173 7.907389 AGATCTCTCAAAACACCAACTATGTA 58.093 34.615 0.00 0.00 0.00 2.29
4748 5181 9.303116 TCAAAACACCAACTATGTACCATTATT 57.697 29.630 0.00 0.00 0.00 1.40
5061 5498 3.551890 GCAGAGAATTCAGCAATGCAATG 59.448 43.478 8.35 0.00 36.02 2.82
5075 5512 3.446310 TGCAATGCAATCCATCACATC 57.554 42.857 5.01 0.00 34.76 3.06
5095 5809 3.959293 TCATCATCACATTCTTGCCAGT 58.041 40.909 0.00 0.00 0.00 4.00
5099 5813 3.253921 TCATCACATTCTTGCCAGTTGTG 59.746 43.478 13.62 13.62 36.95 3.33
5101 5815 3.814625 TCACATTCTTGCCAGTTGTGTA 58.185 40.909 16.95 7.21 36.95 2.90
5102 5816 4.397420 TCACATTCTTGCCAGTTGTGTAT 58.603 39.130 16.95 0.00 36.95 2.29
5104 5818 5.048782 TCACATTCTTGCCAGTTGTGTATTC 60.049 40.000 16.95 0.00 36.95 1.75
5105 5819 5.048504 CACATTCTTGCCAGTTGTGTATTCT 60.049 40.000 12.35 0.00 33.83 2.40
5106 5820 6.149308 CACATTCTTGCCAGTTGTGTATTCTA 59.851 38.462 12.35 0.00 33.83 2.10
5108 5822 5.483685 TCTTGCCAGTTGTGTATTCTAGT 57.516 39.130 0.00 0.00 0.00 2.57
5109 5823 5.237815 TCTTGCCAGTTGTGTATTCTAGTG 58.762 41.667 0.00 0.00 0.00 2.74
5110 5824 4.882842 TGCCAGTTGTGTATTCTAGTGA 57.117 40.909 0.00 0.00 0.00 3.41
5111 5825 5.420725 TGCCAGTTGTGTATTCTAGTGAT 57.579 39.130 0.00 0.00 0.00 3.06
5112 5826 5.804639 TGCCAGTTGTGTATTCTAGTGATT 58.195 37.500 0.00 0.00 0.00 2.57
5113 5827 6.237901 TGCCAGTTGTGTATTCTAGTGATTT 58.762 36.000 0.00 0.00 0.00 2.17
5114 5828 6.149308 TGCCAGTTGTGTATTCTAGTGATTTG 59.851 38.462 0.00 0.00 0.00 2.32
5115 5829 6.546395 CCAGTTGTGTATTCTAGTGATTTGC 58.454 40.000 0.00 0.00 0.00 3.68
5116 5830 6.403636 CCAGTTGTGTATTCTAGTGATTTGCC 60.404 42.308 0.00 0.00 0.00 4.52
5132 5846 5.947566 TGATTTGCCTCATCATCAGAGAAAA 59.052 36.000 0.00 0.00 35.09 2.29
5133 5847 5.633830 TTTGCCTCATCATCAGAGAAAAC 57.366 39.130 0.00 0.00 35.09 2.43
5136 5850 3.866651 CCTCATCATCAGAGAAAACGGT 58.133 45.455 0.00 0.00 35.09 4.83
5183 5897 3.808174 ACAGATCAAGATCATCACATGCG 59.192 43.478 12.21 0.00 40.22 4.73
5185 5899 4.056740 AGATCAAGATCATCACATGCGTC 58.943 43.478 12.21 0.00 40.22 5.19
5187 5901 3.451526 TCAAGATCATCACATGCGTCTC 58.548 45.455 0.00 0.00 0.00 3.36
5208 5922 3.928992 TCGCAAGAGATCAACACATCTTC 59.071 43.478 0.00 0.00 45.01 2.87
5230 5956 8.038944 TCTTCACTAACATTTACTTCGGCTATT 58.961 33.333 0.00 0.00 0.00 1.73
5338 6072 1.166531 GCAACAGCCCTTCACGAACT 61.167 55.000 0.00 0.00 0.00 3.01
5343 6077 1.045407 AGCCCTTCACGAACTACACA 58.955 50.000 0.00 0.00 0.00 3.72
5346 6080 2.547218 GCCCTTCACGAACTACACAAGA 60.547 50.000 0.00 0.00 0.00 3.02
5347 6081 3.318017 CCCTTCACGAACTACACAAGAG 58.682 50.000 0.00 0.00 0.00 2.85
5348 6082 3.243771 CCCTTCACGAACTACACAAGAGT 60.244 47.826 0.00 0.00 0.00 3.24
5349 6083 4.369182 CCTTCACGAACTACACAAGAGTT 58.631 43.478 0.00 0.00 39.85 3.01
5350 6084 4.809426 CCTTCACGAACTACACAAGAGTTT 59.191 41.667 0.00 0.00 37.27 2.66
5351 6085 5.276868 CCTTCACGAACTACACAAGAGTTTG 60.277 44.000 0.00 1.97 42.02 2.93
5353 6087 3.308595 CACGAACTACACAAGAGTTTGCA 59.691 43.478 0.00 0.00 40.59 4.08
5355 6089 4.574828 ACGAACTACACAAGAGTTTGCAAT 59.425 37.500 0.00 0.00 40.59 3.56
5356 6090 5.140177 CGAACTACACAAGAGTTTGCAATC 58.860 41.667 0.00 0.00 37.27 2.67
5357 6091 5.277297 CGAACTACACAAGAGTTTGCAATCA 60.277 40.000 10.05 0.00 37.27 2.57
5358 6092 6.566564 CGAACTACACAAGAGTTTGCAATCAT 60.567 38.462 10.05 0.00 37.27 2.45
5359 6093 6.246420 ACTACACAAGAGTTTGCAATCATC 57.754 37.500 10.05 4.39 37.85 2.92
5360 6094 5.764686 ACTACACAAGAGTTTGCAATCATCA 59.235 36.000 10.05 0.00 37.85 3.07
5362 6096 6.092955 ACACAAGAGTTTGCAATCATCATT 57.907 33.333 10.05 0.00 37.85 2.57
5363 6097 6.518493 ACACAAGAGTTTGCAATCATCATTT 58.482 32.000 10.05 0.00 37.85 2.32
5372 6106 7.758076 AGTTTGCAATCATCATTTACATCACAG 59.242 33.333 10.05 0.00 0.00 3.66
5889 6635 4.813526 CTCCCGCACTCGTCGTCG 62.814 72.222 0.00 0.00 38.55 5.12
5899 6645 3.862402 CGTCGTCGTCCTCCTCCG 61.862 72.222 0.00 0.00 0.00 4.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
131 132 4.804420 ATGAGCCCTCCTGCCGGA 62.804 66.667 5.05 0.00 37.82 5.14
166 167 7.636326 ACACAAACCGTAAACAGATTAAAGAG 58.364 34.615 0.00 0.00 0.00 2.85
197 199 0.468226 TCGCCACCTCAACTTCTTGT 59.532 50.000 0.00 0.00 0.00 3.16
220 222 7.112779 GGGAGAAGTTTATTCCATCTTCAGAA 58.887 38.462 0.00 0.00 38.78 3.02
237 241 4.035102 GGCAAGGCGGGGAGAAGT 62.035 66.667 0.00 0.00 0.00 3.01
372 377 1.480954 AGACACAAGAACACAGACGGT 59.519 47.619 0.00 0.00 0.00 4.83
373 378 2.225068 AGACACAAGAACACAGACGG 57.775 50.000 0.00 0.00 0.00 4.79
423 428 1.976474 AACAACCGCCGCCATGAAT 60.976 52.632 0.00 0.00 0.00 2.57
450 456 1.855295 AAGGTCCCAAAAACCAACGT 58.145 45.000 0.00 0.00 39.39 3.99
507 513 2.074547 TTCATCGGAGTCGGACAAAC 57.925 50.000 11.27 1.48 36.95 2.93
527 534 2.671351 CGTGCTACCGTCATCACTCTTT 60.671 50.000 0.00 0.00 0.00 2.52
533 541 1.884075 AAGGCGTGCTACCGTCATCA 61.884 55.000 0.00 0.00 34.19 3.07
543 551 3.188786 GCGAATCGAAGGCGTGCT 61.189 61.111 6.91 0.00 38.98 4.40
576 584 5.456548 TGTTTGTAGATCACCTAACGACA 57.543 39.130 0.00 0.00 0.00 4.35
616 625 2.544267 ACTACAAACACTTGAGCGAAGC 59.456 45.455 0.00 0.00 45.36 3.86
617 626 3.121328 CGACTACAAACACTTGAGCGAAG 60.121 47.826 0.00 0.00 36.33 3.79
618 627 2.792674 CGACTACAAACACTTGAGCGAA 59.207 45.455 0.00 0.00 36.33 4.70
619 628 2.223641 ACGACTACAAACACTTGAGCGA 60.224 45.455 0.00 0.00 36.33 4.93
620 629 2.124903 ACGACTACAAACACTTGAGCG 58.875 47.619 0.00 0.00 36.33 5.03
621 630 2.153247 CGACGACTACAAACACTTGAGC 59.847 50.000 0.00 0.00 36.33 4.26
622 631 3.369385 ACGACGACTACAAACACTTGAG 58.631 45.455 0.00 0.00 36.33 3.02
623 632 3.425577 ACGACGACTACAAACACTTGA 57.574 42.857 0.00 0.00 36.33 3.02
624 633 5.174398 ACATAACGACGACTACAAACACTTG 59.826 40.000 0.00 0.00 38.61 3.16
625 634 5.174398 CACATAACGACGACTACAAACACTT 59.826 40.000 0.00 0.00 0.00 3.16
626 635 4.678287 CACATAACGACGACTACAAACACT 59.322 41.667 0.00 0.00 0.00 3.55
627 636 4.676471 TCACATAACGACGACTACAAACAC 59.324 41.667 0.00 0.00 0.00 3.32
628 637 4.857799 TCACATAACGACGACTACAAACA 58.142 39.130 0.00 0.00 0.00 2.83
629 638 5.798934 AGATCACATAACGACGACTACAAAC 59.201 40.000 0.00 0.00 0.00 2.93
630 639 5.946298 AGATCACATAACGACGACTACAAA 58.054 37.500 0.00 0.00 0.00 2.83
631 640 5.556355 AGATCACATAACGACGACTACAA 57.444 39.130 0.00 0.00 0.00 2.41
632 641 5.581874 TGTAGATCACATAACGACGACTACA 59.418 40.000 0.00 0.00 36.46 2.74
633 642 6.040962 TGTAGATCACATAACGACGACTAC 57.959 41.667 0.00 0.00 30.04 2.73
634 643 6.667007 TTGTAGATCACATAACGACGACTA 57.333 37.500 0.00 0.00 36.90 2.59
635 644 5.556355 TTGTAGATCACATAACGACGACT 57.444 39.130 0.00 0.00 36.90 4.18
636 645 5.570206 TGTTTGTAGATCACATAACGACGAC 59.430 40.000 0.00 0.00 36.90 4.34
637 646 5.701855 TGTTTGTAGATCACATAACGACGA 58.298 37.500 0.00 0.00 36.90 4.20
638 647 6.089016 ACTTGTTTGTAGATCACATAACGACG 59.911 38.462 0.00 0.00 36.90 5.12
639 648 7.347508 ACTTGTTTGTAGATCACATAACGAC 57.652 36.000 0.00 0.00 36.90 4.34
640 649 9.083080 CATACTTGTTTGTAGATCACATAACGA 57.917 33.333 0.00 4.92 36.90 3.85
641 650 8.869897 ACATACTTGTTTGTAGATCACATAACG 58.130 33.333 0.00 0.00 36.90 3.18
669 678 9.196552 GCTAAGAACACAAGAAGCAATAAAAAT 57.803 29.630 0.00 0.00 0.00 1.82
693 702 4.071961 TCAAATATCACATACCAGCGCT 57.928 40.909 2.64 2.64 0.00 5.92
696 705 9.440773 TCTATTCATCAAATATCACATACCAGC 57.559 33.333 0.00 0.00 0.00 4.85
771 780 3.006756 ATGGTGGCGACGTGAGGAG 62.007 63.158 0.00 0.00 0.00 3.69
790 799 2.804527 GGTAACGTCTCCTTGGTTTGAC 59.195 50.000 0.00 0.00 0.00 3.18
791 800 2.224354 GGGTAACGTCTCCTTGGTTTGA 60.224 50.000 8.50 0.00 37.60 2.69
792 801 2.148768 GGGTAACGTCTCCTTGGTTTG 58.851 52.381 8.50 0.00 37.60 2.93
793 802 1.072806 GGGGTAACGTCTCCTTGGTTT 59.927 52.381 8.50 0.00 37.60 3.27
796 805 1.217244 CGGGGTAACGTCTCCTTGG 59.783 63.158 8.50 0.00 37.60 3.61
798 807 0.833409 AACCGGGGTAACGTCTCCTT 60.833 55.000 6.32 0.00 37.60 3.36
800 809 0.894835 TAAACCGGGGTAACGTCTCC 59.105 55.000 6.32 0.00 37.60 3.71
810 820 1.536766 GTTTCCGTTTCTAAACCGGGG 59.463 52.381 6.32 0.00 35.51 5.73
1214 1239 2.280524 TCAACACGGCCGGTTCAG 60.281 61.111 31.76 17.93 0.00 3.02
1320 1345 2.819984 TTCGGCTGGAGGGAACATGC 62.820 60.000 0.00 0.00 0.00 4.06
1331 1356 1.236616 TGACAGTGCAATTCGGCTGG 61.237 55.000 4.94 0.00 33.62 4.85
1370 1395 5.571285 TCGACAGATATTACTAGGCTGGAT 58.429 41.667 4.33 0.00 0.00 3.41
1418 1443 6.377327 TCTGAAAGTTCAATCAACAGAACC 57.623 37.500 0.00 0.00 43.89 3.62
1419 1444 6.260936 TCCTCTGAAAGTTCAATCAACAGAAC 59.739 38.462 0.00 0.00 43.33 3.01
1420 1445 6.356556 TCCTCTGAAAGTTCAATCAACAGAA 58.643 36.000 0.00 0.00 37.48 3.02
1422 1447 6.624352 TTCCTCTGAAAGTTCAATCAACAG 57.376 37.500 0.00 0.00 37.48 3.16
1425 1465 6.517194 GCCAATTCCTCTGAAAGTTCAATCAA 60.517 38.462 0.00 0.00 36.64 2.57
1511 1551 1.052287 CGTTCTTGGCGCAATTCAAC 58.948 50.000 10.83 4.04 0.00 3.18
1529 1569 1.338337 AGAACAGTCACAGAGGACACG 59.662 52.381 0.00 0.00 40.29 4.49
1561 1601 7.061054 AGAACATATTAGCCCCTTTCCTAAAC 58.939 38.462 0.00 0.00 0.00 2.01
1616 1657 6.040955 ACTCGATTCCAGCAAGACAGAATATA 59.959 38.462 0.00 0.00 0.00 0.86
1617 1658 5.163364 ACTCGATTCCAGCAAGACAGAATAT 60.163 40.000 0.00 0.00 0.00 1.28
1654 1695 4.536065 TGAAAATGACACGCTTTAGCAAG 58.464 39.130 2.29 0.00 42.21 4.01
1676 1717 9.308000 AGGAAGAATCGTCTGAAATCTATCTAT 57.692 33.333 0.00 0.00 33.05 1.98
1692 1733 3.730061 GCACATCAAAGCAGGAAGAATCG 60.730 47.826 0.00 0.00 0.00 3.34
1806 1860 4.212004 GGAAGTTTCGGTTAGGTAACACAC 59.788 45.833 2.44 0.00 37.92 3.82
1810 1864 4.633126 GGATGGAAGTTTCGGTTAGGTAAC 59.367 45.833 0.00 0.00 35.50 2.50
1815 1869 3.270877 CAGGGATGGAAGTTTCGGTTAG 58.729 50.000 0.00 0.00 0.00 2.34
1827 1881 1.067295 AGCAACAGAACAGGGATGGA 58.933 50.000 0.00 0.00 0.00 3.41
1871 1925 7.763172 ATAACGTCAAGCAGAATAAGAGAAG 57.237 36.000 0.00 0.00 0.00 2.85
1879 1940 7.552687 TCAATAAGGAATAACGTCAAGCAGAAT 59.447 33.333 0.00 0.00 0.00 2.40
1905 1966 1.305213 AGGGATGGCCACGCAAATT 60.305 52.632 8.16 0.00 35.15 1.82
1922 1983 3.058432 CACCTGCAAAATCACTGACAGAG 60.058 47.826 10.08 0.55 0.00 3.35
2123 2206 3.159472 TCAATGCATCAAGGCTCAAAGT 58.841 40.909 0.00 0.00 34.04 2.66
2145 2228 5.125417 GGCTTGCACATAACTATTCCTTTGA 59.875 40.000 0.00 0.00 0.00 2.69
2147 2230 4.402474 GGGCTTGCACATAACTATTCCTTT 59.598 41.667 0.00 0.00 0.00 3.11
2209 2295 2.808933 GCGGTGGTGCCTAGCATTTATA 60.809 50.000 0.00 0.00 41.91 0.98
2214 2300 4.838152 CGCGGTGGTGCCTAGCAT 62.838 66.667 0.00 0.00 41.91 3.79
2261 2347 3.312421 ACGTAATATGGCTGCATCACAAC 59.688 43.478 0.50 0.00 0.00 3.32
2265 2351 4.195416 TGAAACGTAATATGGCTGCATCA 58.805 39.130 0.50 0.00 0.00 3.07
2272 2358 3.942748 TCACCCTTGAAACGTAATATGGC 59.057 43.478 0.00 0.00 0.00 4.40
2310 2396 5.041951 TGGACGATGATTTAACAAACAGC 57.958 39.130 0.00 0.00 0.00 4.40
2313 2399 6.435428 ACACTTGGACGATGATTTAACAAAC 58.565 36.000 0.00 0.00 0.00 2.93
2330 2417 3.480470 ACTGATCACCAGAAACACTTGG 58.520 45.455 0.00 0.00 45.78 3.61
2396 2490 4.118410 CAGAGCAGCTTGAACCTGTATAG 58.882 47.826 0.00 0.00 32.93 1.31
2499 2593 4.327357 CCTTGTTGTACAGATTCTACAGCG 59.673 45.833 0.00 0.00 30.22 5.18
2512 2606 4.041723 GCATTCACACAACCTTGTTGTAC 58.958 43.478 11.86 0.00 39.91 2.90
2559 2653 2.054363 CACAGTTGTACTCTGCAGACG 58.946 52.381 13.74 11.72 36.50 4.18
2875 2978 5.183228 ACCCTCATTAATGTGGTCTAAACG 58.817 41.667 26.83 16.11 39.24 3.60
2938 3060 9.110382 AGGCAGATGAATTAGGTAGAATTCTAT 57.890 33.333 17.95 6.17 43.40 1.98
2946 3068 5.762218 CCAAAGAGGCAGATGAATTAGGTAG 59.238 44.000 0.00 0.00 0.00 3.18
2960 3082 3.228188 AGACATGAAACCAAAGAGGCA 57.772 42.857 0.00 0.00 43.14 4.75
2974 3096 6.015603 TGTCTCAGATTGATAGGCTAGACATG 60.016 42.308 0.00 0.00 37.70 3.21
2987 3109 8.908786 AGACTAACAAAATTGTCTCAGATTGA 57.091 30.769 0.00 0.00 41.31 2.57
3043 3165 4.637483 TTGAGGAGCTGTTCAACTTTTG 57.363 40.909 0.00 0.00 0.00 2.44
3057 3179 2.432146 TCGGAGATTGGTGATTGAGGAG 59.568 50.000 0.00 0.00 0.00 3.69
3073 3195 6.867293 ACTAGTACTTAAACTTTTGCTCGGAG 59.133 38.462 0.00 0.00 0.00 4.63
3112 3338 4.828939 ACATTGCATGATCCATATTTCCGT 59.171 37.500 0.00 0.00 0.00 4.69
3130 3356 9.241317 GCACCAATATTCTCAGAATTAACATTG 57.759 33.333 4.90 9.11 0.00 2.82
3173 3399 3.700038 GCCAGACTGCTTTACTCCTAGTA 59.300 47.826 0.00 0.00 0.00 1.82
3206 3432 6.238610 ACTACACACAAGTCGACTAGTAAG 57.761 41.667 20.39 17.99 0.00 2.34
3216 3442 5.721232 ACCTATAGCAACTACACACAAGTC 58.279 41.667 0.00 0.00 0.00 3.01
3314 3540 8.230486 AGCAACGTGATATTCTTTCTAAACAAG 58.770 33.333 0.00 0.00 0.00 3.16
3316 3542 7.518161 CAGCAACGTGATATTCTTTCTAAACA 58.482 34.615 0.00 0.00 0.00 2.83
3323 3549 5.411361 TGTAAGCAGCAACGTGATATTCTTT 59.589 36.000 0.00 0.00 0.00 2.52
3421 3648 7.913789 TGTACCAGGAATAGTAAACAGAACAT 58.086 34.615 0.00 0.00 0.00 2.71
3458 3685 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
3459 3686 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
3460 3687 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
3461 3688 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
3462 3689 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
3463 3690 2.537401 GACAAGTATTTCCGGACGGAG 58.463 52.381 13.64 3.15 46.06 4.63
3464 3691 1.135315 CGACAAGTATTTCCGGACGGA 60.135 52.381 1.83 9.76 43.52 4.69
3465 3692 1.274596 CGACAAGTATTTCCGGACGG 58.725 55.000 1.83 3.96 0.00 4.79
3466 3693 1.135315 TCCGACAAGTATTTCCGGACG 60.135 52.381 1.83 0.00 43.47 4.79
3467 3694 2.165030 TCTCCGACAAGTATTTCCGGAC 59.835 50.000 1.83 0.00 43.47 4.79
3468 3695 2.449464 TCTCCGACAAGTATTTCCGGA 58.551 47.619 0.00 0.00 45.74 5.14
3469 3696 2.953466 TCTCCGACAAGTATTTCCGG 57.047 50.000 0.00 0.00 41.36 5.14
3470 3697 4.868171 TCATTTCTCCGACAAGTATTTCCG 59.132 41.667 0.00 0.00 0.00 4.30
3471 3698 6.737254 TTCATTTCTCCGACAAGTATTTCC 57.263 37.500 0.00 0.00 0.00 3.13
3472 3699 7.752695 ACATTCATTTCTCCGACAAGTATTTC 58.247 34.615 0.00 0.00 0.00 2.17
3473 3700 7.687941 ACATTCATTTCTCCGACAAGTATTT 57.312 32.000 0.00 0.00 0.00 1.40
3474 3701 8.964476 ATACATTCATTTCTCCGACAAGTATT 57.036 30.769 0.00 0.00 0.00 1.89
3475 3702 8.424918 AGATACATTCATTTCTCCGACAAGTAT 58.575 33.333 0.00 0.00 0.00 2.12
3476 3703 7.782049 AGATACATTCATTTCTCCGACAAGTA 58.218 34.615 0.00 0.00 0.00 2.24
3477 3704 6.644347 AGATACATTCATTTCTCCGACAAGT 58.356 36.000 0.00 0.00 0.00 3.16
3478 3705 8.138074 TCTAGATACATTCATTTCTCCGACAAG 58.862 37.037 0.00 0.00 0.00 3.16
3479 3706 7.921214 GTCTAGATACATTCATTTCTCCGACAA 59.079 37.037 0.00 0.00 0.00 3.18
3480 3707 7.068226 TGTCTAGATACATTCATTTCTCCGACA 59.932 37.037 0.00 0.00 31.77 4.35
3481 3708 7.380065 GTGTCTAGATACATTCATTTCTCCGAC 59.620 40.741 14.20 0.00 0.00 4.79
3482 3709 7.068226 TGTGTCTAGATACATTCATTTCTCCGA 59.932 37.037 17.43 0.00 0.00 4.55
3483 3710 7.203218 TGTGTCTAGATACATTCATTTCTCCG 58.797 38.462 17.43 0.00 0.00 4.63
3484 3711 9.553064 AATGTGTCTAGATACATTCATTTCTCC 57.447 33.333 31.12 1.24 45.77 3.71
3502 3729 9.073475 GGATGTATCTAGAACTAGAATGTGTCT 57.927 37.037 14.25 1.11 44.44 3.41
3503 3730 8.851145 TGGATGTATCTAGAACTAGAATGTGTC 58.149 37.037 14.25 9.51 44.44 3.67
3504 3731 8.768501 TGGATGTATCTAGAACTAGAATGTGT 57.231 34.615 14.25 2.33 44.44 3.72
3522 3749 9.919416 TCAGAGAAATGGATAAAAATGGATGTA 57.081 29.630 0.00 0.00 0.00 2.29
3523 3750 8.689972 GTCAGAGAAATGGATAAAAATGGATGT 58.310 33.333 0.00 0.00 0.00 3.06
3524 3751 8.689061 TGTCAGAGAAATGGATAAAAATGGATG 58.311 33.333 0.00 0.00 0.00 3.51
3525 3752 8.827832 TGTCAGAGAAATGGATAAAAATGGAT 57.172 30.769 0.00 0.00 0.00 3.41
3526 3753 8.648698 TTGTCAGAGAAATGGATAAAAATGGA 57.351 30.769 0.00 0.00 0.00 3.41
3527 3754 8.526147 ACTTGTCAGAGAAATGGATAAAAATGG 58.474 33.333 0.00 0.00 0.00 3.16
3534 3761 9.098355 CGAAAATACTTGTCAGAGAAATGGATA 57.902 33.333 0.00 0.00 0.00 2.59
3535 3762 7.066284 CCGAAAATACTTGTCAGAGAAATGGAT 59.934 37.037 0.00 0.00 0.00 3.41
3536 3763 6.371548 CCGAAAATACTTGTCAGAGAAATGGA 59.628 38.462 0.00 0.00 0.00 3.41
3537 3764 6.371548 TCCGAAAATACTTGTCAGAGAAATGG 59.628 38.462 0.00 0.00 0.00 3.16
3538 3765 7.237173 GTCCGAAAATACTTGTCAGAGAAATG 58.763 38.462 0.00 0.00 0.00 2.32
3539 3766 6.090898 CGTCCGAAAATACTTGTCAGAGAAAT 59.909 38.462 0.00 0.00 0.00 2.17
3540 3767 5.404366 CGTCCGAAAATACTTGTCAGAGAAA 59.596 40.000 0.00 0.00 0.00 2.52
3541 3768 4.921515 CGTCCGAAAATACTTGTCAGAGAA 59.078 41.667 0.00 0.00 0.00 2.87
3542 3769 4.482386 CGTCCGAAAATACTTGTCAGAGA 58.518 43.478 0.00 0.00 0.00 3.10
3543 3770 3.612860 CCGTCCGAAAATACTTGTCAGAG 59.387 47.826 0.00 0.00 0.00 3.35
3544 3771 3.256383 TCCGTCCGAAAATACTTGTCAGA 59.744 43.478 0.00 0.00 0.00 3.27
3545 3772 3.581755 TCCGTCCGAAAATACTTGTCAG 58.418 45.455 0.00 0.00 0.00 3.51
3546 3773 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
3547 3774 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
3548 3775 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
3549 3776 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
3550 3777 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
3551 3778 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
3552 3779 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
3553 3780 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
3554 3781 1.755380 CTACTCCCTCCGTCCGAAAAT 59.245 52.381 0.00 0.00 0.00 1.82
3555 3782 1.180029 CTACTCCCTCCGTCCGAAAA 58.820 55.000 0.00 0.00 0.00 2.29
3556 3783 0.038744 ACTACTCCCTCCGTCCGAAA 59.961 55.000 0.00 0.00 0.00 3.46
3557 3784 0.911769 TACTACTCCCTCCGTCCGAA 59.088 55.000 0.00 0.00 0.00 4.30
3558 3785 0.467384 CTACTACTCCCTCCGTCCGA 59.533 60.000 0.00 0.00 0.00 4.55
3559 3786 0.179936 ACTACTACTCCCTCCGTCCG 59.820 60.000 0.00 0.00 0.00 4.79
3560 3787 1.211457 TGACTACTACTCCCTCCGTCC 59.789 57.143 0.00 0.00 0.00 4.79
3561 3788 2.706339 TGACTACTACTCCCTCCGTC 57.294 55.000 0.00 0.00 0.00 4.79
3562 3789 2.575279 TCTTGACTACTACTCCCTCCGT 59.425 50.000 0.00 0.00 0.00 4.69
3563 3790 3.118334 TCTCTTGACTACTACTCCCTCCG 60.118 52.174 0.00 0.00 0.00 4.63
3564 3791 4.506937 TCTCTTGACTACTACTCCCTCC 57.493 50.000 0.00 0.00 0.00 4.30
3565 3792 5.221165 GCAATCTCTTGACTACTACTCCCTC 60.221 48.000 0.00 0.00 34.04 4.30
3566 3793 4.647399 GCAATCTCTTGACTACTACTCCCT 59.353 45.833 0.00 0.00 34.04 4.20
3567 3794 4.647399 AGCAATCTCTTGACTACTACTCCC 59.353 45.833 0.00 0.00 34.04 4.30
3568 3795 5.827666 GAGCAATCTCTTGACTACTACTCC 58.172 45.833 0.00 0.00 36.42 3.85
3661 3891 6.696441 AGACCGTTTAGATCACTAAGGTAG 57.304 41.667 0.00 0.00 37.31 3.18
3662 3892 8.757982 ATAAGACCGTTTAGATCACTAAGGTA 57.242 34.615 0.00 0.00 37.31 3.08
3663 3893 5.997384 AAGACCGTTTAGATCACTAAGGT 57.003 39.130 0.00 0.00 38.78 3.50
3677 3907 7.490402 CCGTCTGTAAAGAAATATAAGACCGTT 59.510 37.037 0.00 0.00 0.00 4.44
3679 3909 7.198390 TCCGTCTGTAAAGAAATATAAGACCG 58.802 38.462 0.00 0.00 0.00 4.79
3688 3918 6.092259 GCAATGTACTCCGTCTGTAAAGAAAT 59.908 38.462 0.00 0.00 0.00 2.17
3689 3919 5.407387 GCAATGTACTCCGTCTGTAAAGAAA 59.593 40.000 0.00 0.00 0.00 2.52
3690 3920 4.927425 GCAATGTACTCCGTCTGTAAAGAA 59.073 41.667 0.00 0.00 0.00 2.52
3691 3921 4.021807 TGCAATGTACTCCGTCTGTAAAGA 60.022 41.667 0.00 0.00 0.00 2.52
3692 3922 4.091509 GTGCAATGTACTCCGTCTGTAAAG 59.908 45.833 0.00 0.00 0.00 1.85
3693 3923 3.991773 GTGCAATGTACTCCGTCTGTAAA 59.008 43.478 0.00 0.00 0.00 2.01
3694 3924 3.006003 TGTGCAATGTACTCCGTCTGTAA 59.994 43.478 2.75 0.00 0.00 2.41
3695 3925 2.559231 TGTGCAATGTACTCCGTCTGTA 59.441 45.455 2.75 0.00 0.00 2.74
3697 3927 2.078849 TGTGCAATGTACTCCGTCTG 57.921 50.000 2.75 0.00 0.00 3.51
3699 3929 3.889196 TTTTGTGCAATGTACTCCGTC 57.111 42.857 2.75 0.00 0.00 4.79
3700 3930 7.801716 ATATATTTTGTGCAATGTACTCCGT 57.198 32.000 2.75 0.00 0.00 4.69
3701 3931 8.988934 AGTATATATTTTGTGCAATGTACTCCG 58.011 33.333 2.75 0.00 0.00 4.63
3738 4137 1.675310 CCGTTTCATCCTGCCAGCA 60.675 57.895 0.00 0.00 0.00 4.41
3782 4181 4.081406 ACTTGCAGCATCACCAAAATCTA 58.919 39.130 0.00 0.00 0.00 1.98
3988 4387 2.288825 TGGAGTAAGCCTTGAGTTGACG 60.289 50.000 0.00 0.00 0.00 4.35
3993 4392 1.352083 TGCTGGAGTAAGCCTTGAGT 58.648 50.000 0.00 0.00 42.83 3.41
4115 4514 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
4116 4515 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
4117 4516 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
4118 4517 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
4119 4518 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
4120 4519 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
4121 4520 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
4122 4521 3.930229 TCAATGACAAGTATTTCCGGACG 59.070 43.478 1.83 0.00 0.00 4.79
4123 4522 5.873179 TTCAATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 0.00 4.79
4124 4523 6.127758 CCATTTCAATGACAAGTATTTCCGGA 60.128 38.462 0.00 0.00 38.70 5.14
4125 4524 6.035843 CCATTTCAATGACAAGTATTTCCGG 58.964 40.000 0.00 0.00 38.70 5.14
4126 4525 6.851609 TCCATTTCAATGACAAGTATTTCCG 58.148 36.000 0.81 0.00 38.70 4.30
4127 4526 8.253113 ACATCCATTTCAATGACAAGTATTTCC 58.747 33.333 0.81 0.00 38.70 3.13
4131 4530 9.857656 AGATACATCCATTTCAATGACAAGTAT 57.142 29.630 0.81 4.50 38.70 2.12
4133 4532 9.334947 CTAGATACATCCATTTCAATGACAAGT 57.665 33.333 0.81 0.00 38.70 3.16
4134 4533 9.551734 TCTAGATACATCCATTTCAATGACAAG 57.448 33.333 0.81 0.00 38.70 3.16
4136 4535 9.498176 CATCTAGATACATCCATTTCAATGACA 57.502 33.333 4.54 0.00 38.70 3.58
4137 4536 9.499479 ACATCTAGATACATCCATTTCAATGAC 57.501 33.333 4.54 0.00 38.70 3.06
4169 4568 9.553064 GTCATCAAAATGGATGTATCTAGAACT 57.447 33.333 0.00 0.00 44.00 3.01
4170 4569 9.330063 TGTCATCAAAATGGATGTATCTAGAAC 57.670 33.333 0.00 0.00 44.00 3.01
4171 4570 9.904198 TTGTCATCAAAATGGATGTATCTAGAA 57.096 29.630 0.00 0.00 44.00 2.10
4172 4571 9.551734 CTTGTCATCAAAATGGATGTATCTAGA 57.448 33.333 0.00 0.00 44.00 2.43
4173 4572 9.334947 ACTTGTCATCAAAATGGATGTATCTAG 57.665 33.333 0.00 0.00 44.00 2.43
4175 4574 9.685276 TTACTTGTCATCAAAATGGATGTATCT 57.315 29.630 0.00 0.00 44.00 1.98
4179 4578 8.253113 GGAATTACTTGTCATCAAAATGGATGT 58.747 33.333 0.00 0.00 44.00 3.06
4180 4579 7.433131 CGGAATTACTTGTCATCAAAATGGATG 59.567 37.037 0.00 0.00 44.78 3.51
4181 4580 7.416664 CCGGAATTACTTGTCATCAAAATGGAT 60.417 37.037 0.00 0.00 33.42 3.41
4182 4581 6.127758 CCGGAATTACTTGTCATCAAAATGGA 60.128 38.462 0.00 0.00 33.42 3.41
4183 4582 6.035843 CCGGAATTACTTGTCATCAAAATGG 58.964 40.000 0.00 0.00 33.42 3.16
4184 4583 6.747280 GTCCGGAATTACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
4185 4584 6.403200 CGTCCGGAATTACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
4186 4585 5.106869 CGTCCGGAATTACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
4187 4586 4.390603 CGTCCGGAATTACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
4188 4587 3.930229 CGTCCGGAATTACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
4189 4588 3.517602 CGTCCGGAATTACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
4190 4589 2.864343 CCGTCCGGAATTACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
4191 4590 2.498481 TCCGTCCGGAATTACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
4192 4591 1.894466 TCCGTCCGGAATTACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
4193 4592 2.537401 CTCCGTCCGGAATTACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
4194 4593 1.206371 CCTCCGTCCGGAATTACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
4195 4594 1.472728 CCCTCCGTCCGGAATTACTTG 60.473 57.143 5.23 0.00 44.66 3.16
4196 4595 0.828677 CCCTCCGTCCGGAATTACTT 59.171 55.000 5.23 0.00 44.66 2.24
4197 4596 0.032813 TCCCTCCGTCCGGAATTACT 60.033 55.000 5.23 0.00 44.66 2.24
4198 4597 0.388294 CTCCCTCCGTCCGGAATTAC 59.612 60.000 5.23 0.00 44.66 1.89
4199 4598 0.032813 ACTCCCTCCGTCCGGAATTA 60.033 55.000 5.23 0.00 44.66 1.40
4200 4599 0.032813 TACTCCCTCCGTCCGGAATT 60.033 55.000 5.23 0.00 44.66 2.17
4201 4600 0.187851 ATACTCCCTCCGTCCGGAAT 59.812 55.000 5.23 0.00 44.66 3.01
4202 4601 0.754217 CATACTCCCTCCGTCCGGAA 60.754 60.000 5.23 0.00 44.66 4.30
4203 4602 1.152819 CATACTCCCTCCGTCCGGA 60.153 63.158 0.00 0.00 42.90 5.14
4204 4603 1.041447 AACATACTCCCTCCGTCCGG 61.041 60.000 0.00 0.00 0.00 5.14
4205 4604 0.822164 AAACATACTCCCTCCGTCCG 59.178 55.000 0.00 0.00 0.00 4.79
4206 4605 3.345508 AAAAACATACTCCCTCCGTCC 57.654 47.619 0.00 0.00 0.00 4.79
4245 4653 2.987547 ACGCATGCTGCCTTTGCT 60.988 55.556 17.13 3.06 41.12 3.91
4251 4659 1.016627 TTAGATTCACGCATGCTGCC 58.983 50.000 17.13 6.14 41.12 4.85
4283 4697 7.961325 AGGCAATTTGTAAACCAGTTAAATG 57.039 32.000 0.00 0.00 0.00 2.32
4778 5211 5.779241 TCAAGAAAGTAGAATCCCCACAT 57.221 39.130 0.00 0.00 0.00 3.21
5061 5498 4.277423 TGTGATGATGATGTGATGGATTGC 59.723 41.667 0.00 0.00 0.00 3.56
5075 5512 4.082408 ACAACTGGCAAGAATGTGATGATG 60.082 41.667 0.00 0.00 0.00 3.07
5095 5809 6.472016 TGAGGCAAATCACTAGAATACACAA 58.528 36.000 0.00 0.00 0.00 3.33
5099 5813 7.658982 TGATGATGAGGCAAATCACTAGAATAC 59.341 37.037 0.00 0.00 36.89 1.89
5101 5815 6.598503 TGATGATGAGGCAAATCACTAGAAT 58.401 36.000 0.00 0.00 36.89 2.40
5102 5816 5.993055 TGATGATGAGGCAAATCACTAGAA 58.007 37.500 0.00 0.00 36.89 2.10
5104 5818 5.608449 TCTGATGATGAGGCAAATCACTAG 58.392 41.667 4.49 6.42 36.89 2.57
5105 5819 5.364735 TCTCTGATGATGAGGCAAATCACTA 59.635 40.000 4.49 0.00 36.89 2.74
5106 5820 4.163649 TCTCTGATGATGAGGCAAATCACT 59.836 41.667 4.49 0.00 36.89 3.41
5108 5822 4.765813 TCTCTGATGATGAGGCAAATCA 57.234 40.909 4.82 4.82 38.37 2.57
5109 5823 6.264088 GTTTTCTCTGATGATGAGGCAAATC 58.736 40.000 0.00 0.00 32.78 2.17
5110 5824 5.163683 CGTTTTCTCTGATGATGAGGCAAAT 60.164 40.000 0.00 0.00 32.78 2.32
5111 5825 4.154737 CGTTTTCTCTGATGATGAGGCAAA 59.845 41.667 0.00 0.00 32.78 3.68
5112 5826 3.686241 CGTTTTCTCTGATGATGAGGCAA 59.314 43.478 0.00 0.00 32.78 4.52
5113 5827 3.264947 CGTTTTCTCTGATGATGAGGCA 58.735 45.455 0.00 0.00 32.78 4.75
5114 5828 2.611292 CCGTTTTCTCTGATGATGAGGC 59.389 50.000 0.00 0.00 32.78 4.70
5115 5829 3.866651 ACCGTTTTCTCTGATGATGAGG 58.133 45.455 0.00 0.00 32.78 3.86
5116 5830 6.368791 TGTTTACCGTTTTCTCTGATGATGAG 59.631 38.462 0.00 0.00 0.00 2.90
5132 5846 8.723311 TCGAAATCATAAGAATTTGTTTACCGT 58.277 29.630 0.00 0.00 0.00 4.83
5133 5847 9.716507 ATCGAAATCATAAGAATTTGTTTACCG 57.283 29.630 0.00 0.00 0.00 4.02
5156 5870 7.621633 GCATGTGATGATCTTGATCTGTTATCG 60.622 40.741 11.31 0.00 0.00 2.92
5185 5899 3.519579 AGATGTGTTGATCTCTTGCGAG 58.480 45.455 0.00 0.00 38.67 5.03
5187 5901 3.681417 TGAAGATGTGTTGATCTCTTGCG 59.319 43.478 0.00 0.00 31.07 4.85
5202 5916 6.313905 AGCCGAAGTAAATGTTAGTGAAGATG 59.686 38.462 0.00 0.00 0.00 2.90
5208 5922 7.303634 ACAATAGCCGAAGTAAATGTTAGTG 57.696 36.000 0.00 0.00 0.00 2.74
5338 6072 6.822667 ATGATGATTGCAAACTCTTGTGTA 57.177 33.333 1.71 0.00 34.79 2.90
5343 6077 8.525316 TGATGTAAATGATGATTGCAAACTCTT 58.475 29.630 1.71 0.00 0.00 2.85
5346 6080 7.604549 TGTGATGTAAATGATGATTGCAAACT 58.395 30.769 1.71 0.00 0.00 2.66
5347 6081 7.009815 CCTGTGATGTAAATGATGATTGCAAAC 59.990 37.037 1.71 0.04 0.00 2.93
5348 6082 7.036829 CCTGTGATGTAAATGATGATTGCAAA 58.963 34.615 1.71 0.00 0.00 3.68
5349 6083 6.153170 ACCTGTGATGTAAATGATGATTGCAA 59.847 34.615 0.00 0.00 0.00 4.08
5350 6084 5.653330 ACCTGTGATGTAAATGATGATTGCA 59.347 36.000 0.00 0.00 0.00 4.08
5351 6085 6.140303 ACCTGTGATGTAAATGATGATTGC 57.860 37.500 0.00 0.00 0.00 3.56
5353 6087 7.037438 GCAAACCTGTGATGTAAATGATGATT 58.963 34.615 0.00 0.00 0.00 2.57
5355 6089 5.476254 TGCAAACCTGTGATGTAAATGATGA 59.524 36.000 0.00 0.00 0.00 2.92
5356 6090 5.712004 TGCAAACCTGTGATGTAAATGATG 58.288 37.500 0.00 0.00 0.00 3.07
5357 6091 5.981088 TGCAAACCTGTGATGTAAATGAT 57.019 34.783 0.00 0.00 0.00 2.45
5358 6092 5.781210 TTGCAAACCTGTGATGTAAATGA 57.219 34.783 0.00 0.00 0.00 2.57
5359 6093 5.577945 GGATTGCAAACCTGTGATGTAAATG 59.422 40.000 17.92 0.00 0.00 2.32
5360 6094 5.245751 TGGATTGCAAACCTGTGATGTAAAT 59.754 36.000 24.33 0.00 0.00 1.40
5362 6096 4.148079 TGGATTGCAAACCTGTGATGTAA 58.852 39.130 24.33 0.21 0.00 2.41
5363 6097 3.760738 TGGATTGCAAACCTGTGATGTA 58.239 40.909 24.33 0.92 0.00 2.29
5372 6106 0.460109 GCCCGATTGGATTGCAAACC 60.460 55.000 18.32 18.32 37.49 3.27
5627 6361 2.033602 TCACGGAGGAGCACGAGA 59.966 61.111 0.00 0.00 0.00 4.04
5676 6410 2.917227 TCGTCCCTGCTGCTGTCA 60.917 61.111 0.00 0.00 0.00 3.58
5766 6503 0.675837 AGGAGGACGACGACGATGAA 60.676 55.000 15.32 0.00 42.66 2.57
5769 6506 2.172372 CGAGGAGGACGACGACGAT 61.172 63.158 15.32 0.00 42.66 3.73
5889 6635 2.835895 GAGGAGGCGGAGGAGGAC 60.836 72.222 0.00 0.00 0.00 3.85
5890 6636 4.507916 CGAGGAGGCGGAGGAGGA 62.508 72.222 0.00 0.00 0.00 3.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.