Multiple sequence alignment - TraesCS4D01G059200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G059200 chr4D 100.000 4202 0 0 1 4202 35153999 35149798 0.000000e+00 7760
1 TraesCS4D01G059200 chr4D 86.275 459 30 12 1313 1769 35064149 35063722 6.360000e-128 468
2 TraesCS4D01G059200 chr4B 92.783 2688 123 29 813 3465 51115081 51117732 0.000000e+00 3823
3 TraesCS4D01G059200 chr4B 86.501 563 42 12 756 1291 51111913 51112468 4.680000e-164 588
4 TraesCS4D01G059200 chr4B 94.882 254 10 2 3699 3950 51118017 51118269 1.100000e-105 394
5 TraesCS4D01G059200 chr4B 83.688 141 11 1 3510 3638 51117873 51118013 5.710000e-24 122
6 TraesCS4D01G059200 chr4A 91.167 2287 130 36 213 2455 567483505 567485763 0.000000e+00 3038
7 TraesCS4D01G059200 chr4A 87.265 903 76 30 2453 3329 567486629 567487518 0.000000e+00 994
8 TraesCS4D01G059200 chr4A 85.225 555 52 14 3316 3867 567487609 567488136 1.030000e-150 544
9 TraesCS4D01G059200 chr5D 97.807 228 5 0 1 228 153970230 153970457 1.100000e-105 394
10 TraesCS4D01G059200 chr5D 88.492 252 23 5 3952 4202 310330548 310330794 2.460000e-77 300
11 TraesCS4D01G059200 chr5D 88.095 252 26 4 3952 4200 378130130 378130380 3.180000e-76 296
12 TraesCS4D01G059200 chrUn 97.788 226 5 0 1 226 68445923 68446148 1.420000e-104 390
13 TraesCS4D01G059200 chrUn 98.636 220 3 0 1 220 286911889 286912108 1.420000e-104 390
14 TraesCS4D01G059200 chr2D 97.797 227 3 2 1 226 61779974 61779749 1.420000e-104 390
15 TraesCS4D01G059200 chr2D 97.788 226 4 1 1 225 18460891 18461116 5.090000e-104 388
16 TraesCS4D01G059200 chr2D 90.040 251 24 1 3952 4202 647764700 647764949 1.460000e-84 324
17 TraesCS4D01G059200 chr2D 88.506 261 25 5 3944 4202 189851016 189851273 1.130000e-80 311
18 TraesCS4D01G059200 chr2D 87.739 261 26 5 3944 4202 7543555 7543811 2.460000e-77 300
19 TraesCS4D01G059200 chr1D 96.610 236 6 2 1 234 130464999 130464764 1.420000e-104 390
20 TraesCS4D01G059200 chr1D 96.186 236 8 1 1 235 360059600 360059835 6.590000e-103 385
21 TraesCS4D01G059200 chr3D 97.368 228 6 0 1 228 73003452 73003225 5.090000e-104 388
22 TraesCS4D01G059200 chr3D 96.567 233 6 2 1 233 225470830 225470600 6.590000e-103 385
23 TraesCS4D01G059200 chr2B 88.933 253 22 4 3952 4202 35114467 35114219 1.470000e-79 307
24 TraesCS4D01G059200 chr7D 88.672 256 20 7 3951 4202 109736141 109736391 1.900000e-78 303
25 TraesCS4D01G059200 chr6B 87.649 251 31 0 3952 4202 17911211 17910961 4.110000e-75 292
26 TraesCS4D01G059200 chr7B 86.842 266 24 10 3942 4202 14703267 14703526 1.910000e-73 287


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G059200 chr4D 35149798 35153999 4201 True 7760.000000 7760 100.000000 1 4202 1 chr4D.!!$R2 4201
1 TraesCS4D01G059200 chr4B 51111913 51118269 6356 False 1231.750000 3823 89.463500 756 3950 4 chr4B.!!$F1 3194
2 TraesCS4D01G059200 chr4A 567483505 567488136 4631 False 1525.333333 3038 87.885667 213 3867 3 chr4A.!!$F1 3654

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
655 662 0.102663 TGACGGTTAGCGTGTGTCAA 59.897 50.0 15.74 0.0 36.69 3.18 F
1423 4575 0.107214 GAATCAGGGGCGTCCATTCA 60.107 55.0 9.07 0.0 38.24 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1627 4780 0.033405 CGTCTACAGAAGGAGGGGGA 60.033 60.0 0.0 0.0 0.00 4.81 R
3219 7262 0.104855 GCACGAGATCTGGCATACCA 59.895 55.0 0.0 0.0 46.51 3.25 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.667595 TCCAATGTCCATGGTCAGGA 58.332 50.000 16.79 15.06 39.09 3.86
20 21 1.991813 TCCAATGTCCATGGTCAGGAA 59.008 47.619 16.79 0.75 39.09 3.36
21 22 2.378208 TCCAATGTCCATGGTCAGGAAA 59.622 45.455 16.79 1.08 39.09 3.13
22 23 2.493278 CCAATGTCCATGGTCAGGAAAC 59.507 50.000 16.79 4.30 36.80 2.78
23 24 2.493278 CAATGTCCATGGTCAGGAAACC 59.507 50.000 16.79 0.00 36.80 3.27
32 33 3.963129 TGGTCAGGAAACCATAACCATC 58.037 45.455 0.00 0.00 44.40 3.51
33 34 3.591527 TGGTCAGGAAACCATAACCATCT 59.408 43.478 0.00 0.00 44.40 2.90
34 35 4.785914 TGGTCAGGAAACCATAACCATCTA 59.214 41.667 0.00 0.00 44.40 1.98
35 36 5.431731 TGGTCAGGAAACCATAACCATCTAT 59.568 40.000 0.00 0.00 44.40 1.98
36 37 6.069088 TGGTCAGGAAACCATAACCATCTATT 60.069 38.462 0.00 0.00 44.40 1.73
37 38 6.263168 GGTCAGGAAACCATAACCATCTATTG 59.737 42.308 0.00 0.00 39.27 1.90
38 39 7.054124 GTCAGGAAACCATAACCATCTATTGA 58.946 38.462 0.00 0.00 0.00 2.57
39 40 7.721399 GTCAGGAAACCATAACCATCTATTGAT 59.279 37.037 0.00 0.00 0.00 2.57
40 41 7.939039 TCAGGAAACCATAACCATCTATTGATC 59.061 37.037 0.00 0.00 0.00 2.92
41 42 7.720957 CAGGAAACCATAACCATCTATTGATCA 59.279 37.037 0.00 0.00 0.00 2.92
42 43 8.281531 AGGAAACCATAACCATCTATTGATCAA 58.718 33.333 11.26 11.26 0.00 2.57
43 44 8.352942 GGAAACCATAACCATCTATTGATCAAC 58.647 37.037 11.07 0.00 0.00 3.18
44 45 7.496529 AACCATAACCATCTATTGATCAACG 57.503 36.000 11.07 5.26 0.00 4.10
45 46 6.826668 ACCATAACCATCTATTGATCAACGA 58.173 36.000 11.07 10.80 0.00 3.85
46 47 6.931281 ACCATAACCATCTATTGATCAACGAG 59.069 38.462 11.07 11.28 0.00 4.18
47 48 6.128445 CCATAACCATCTATTGATCAACGAGC 60.128 42.308 11.07 0.00 0.00 5.03
48 49 4.679373 ACCATCTATTGATCAACGAGCT 57.321 40.909 11.07 0.00 0.00 4.09
49 50 5.791336 ACCATCTATTGATCAACGAGCTA 57.209 39.130 11.07 0.00 0.00 3.32
50 51 5.777802 ACCATCTATTGATCAACGAGCTAG 58.222 41.667 11.07 8.38 0.00 3.42
51 52 5.303078 ACCATCTATTGATCAACGAGCTAGT 59.697 40.000 11.07 6.23 0.00 2.57
52 53 5.861251 CCATCTATTGATCAACGAGCTAGTC 59.139 44.000 11.07 0.00 0.00 2.59
53 54 6.442112 CATCTATTGATCAACGAGCTAGTCA 58.558 40.000 11.07 0.00 0.00 3.41
54 55 6.451064 TCTATTGATCAACGAGCTAGTCAA 57.549 37.500 11.07 0.55 0.00 3.18
55 56 6.266323 TCTATTGATCAACGAGCTAGTCAAC 58.734 40.000 11.07 0.00 0.00 3.18
56 57 4.521130 TTGATCAACGAGCTAGTCAACT 57.479 40.909 3.38 0.00 0.00 3.16
57 58 5.638596 TTGATCAACGAGCTAGTCAACTA 57.361 39.130 3.38 0.00 0.00 2.24
58 59 5.236655 TGATCAACGAGCTAGTCAACTAG 57.763 43.478 11.99 11.99 46.63 2.57
59 60 4.941873 TGATCAACGAGCTAGTCAACTAGA 59.058 41.667 19.03 0.00 46.80 2.43
60 61 4.948608 TCAACGAGCTAGTCAACTAGAG 57.051 45.455 19.03 11.89 46.80 2.43
61 62 3.690139 TCAACGAGCTAGTCAACTAGAGG 59.310 47.826 19.03 10.05 46.80 3.69
62 63 2.018515 ACGAGCTAGTCAACTAGAGGC 58.981 52.381 19.03 6.58 46.80 4.70
63 64 2.294074 CGAGCTAGTCAACTAGAGGCT 58.706 52.381 19.03 10.84 46.80 4.58
64 65 2.685897 CGAGCTAGTCAACTAGAGGCTT 59.314 50.000 19.03 1.20 46.80 4.35
65 66 3.878103 CGAGCTAGTCAACTAGAGGCTTA 59.122 47.826 19.03 0.00 46.80 3.09
66 67 4.260866 CGAGCTAGTCAACTAGAGGCTTAC 60.261 50.000 19.03 1.96 46.80 2.34
67 68 4.862371 AGCTAGTCAACTAGAGGCTTACT 58.138 43.478 19.03 3.99 46.80 2.24
68 69 6.003859 AGCTAGTCAACTAGAGGCTTACTA 57.996 41.667 19.03 0.00 46.80 1.82
69 70 6.059484 AGCTAGTCAACTAGAGGCTTACTAG 58.941 44.000 19.03 8.32 46.80 2.57
70 71 5.239963 GCTAGTCAACTAGAGGCTTACTAGG 59.760 48.000 19.03 0.00 46.80 3.02
71 72 4.538738 AGTCAACTAGAGGCTTACTAGGG 58.461 47.826 13.13 6.54 40.86 3.53
72 73 4.230041 AGTCAACTAGAGGCTTACTAGGGA 59.770 45.833 13.13 8.30 40.86 4.20
73 74 4.338964 GTCAACTAGAGGCTTACTAGGGAC 59.661 50.000 13.13 14.30 40.86 4.46
74 75 4.017775 TCAACTAGAGGCTTACTAGGGACA 60.018 45.833 13.13 0.00 40.86 4.02
75 76 4.817874 ACTAGAGGCTTACTAGGGACAT 57.182 45.455 13.13 0.00 40.86 3.06
76 77 4.475345 ACTAGAGGCTTACTAGGGACATG 58.525 47.826 13.13 0.00 40.86 3.21
77 78 3.406512 AGAGGCTTACTAGGGACATGT 57.593 47.619 0.00 0.00 0.00 3.21
78 79 3.725634 AGAGGCTTACTAGGGACATGTT 58.274 45.455 0.00 0.00 0.00 2.71
79 80 3.452627 AGAGGCTTACTAGGGACATGTTG 59.547 47.826 0.00 0.00 0.00 3.33
80 81 3.182152 AGGCTTACTAGGGACATGTTGT 58.818 45.455 0.00 0.00 0.00 3.32
81 82 3.055094 AGGCTTACTAGGGACATGTTGTG 60.055 47.826 0.00 0.00 0.00 3.33
82 83 3.270877 GCTTACTAGGGACATGTTGTGG 58.729 50.000 0.00 0.00 0.00 4.17
83 84 3.307480 GCTTACTAGGGACATGTTGTGGT 60.307 47.826 0.00 0.00 0.00 4.16
84 85 4.504858 CTTACTAGGGACATGTTGTGGTC 58.495 47.826 0.00 0.00 0.00 4.02
85 86 2.621070 ACTAGGGACATGTTGTGGTCT 58.379 47.619 0.00 0.00 34.49 3.85
86 87 3.786553 ACTAGGGACATGTTGTGGTCTA 58.213 45.455 0.00 0.00 34.49 2.59
87 88 4.362677 ACTAGGGACATGTTGTGGTCTAT 58.637 43.478 0.00 0.00 34.49 1.98
88 89 3.634397 AGGGACATGTTGTGGTCTATG 57.366 47.619 0.00 0.00 34.49 2.23
89 90 2.912956 AGGGACATGTTGTGGTCTATGT 59.087 45.455 0.00 0.00 36.54 2.29
90 91 4.101114 AGGGACATGTTGTGGTCTATGTA 58.899 43.478 0.00 0.00 34.18 2.29
91 92 4.721776 AGGGACATGTTGTGGTCTATGTAT 59.278 41.667 0.00 0.00 34.18 2.29
92 93 5.191722 AGGGACATGTTGTGGTCTATGTATT 59.808 40.000 0.00 0.00 34.18 1.89
93 94 5.527582 GGGACATGTTGTGGTCTATGTATTC 59.472 44.000 0.00 0.00 34.18 1.75
94 95 6.112734 GGACATGTTGTGGTCTATGTATTCA 58.887 40.000 0.00 0.00 34.18 2.57
95 96 6.037172 GGACATGTTGTGGTCTATGTATTCAC 59.963 42.308 0.00 0.00 34.18 3.18
96 97 6.472016 ACATGTTGTGGTCTATGTATTCACA 58.528 36.000 0.00 0.00 39.52 3.58
97 98 6.371548 ACATGTTGTGGTCTATGTATTCACAC 59.628 38.462 0.00 0.00 37.96 3.82
98 99 5.859495 TGTTGTGGTCTATGTATTCACACA 58.141 37.500 0.00 0.00 37.96 3.72
99 100 6.472016 TGTTGTGGTCTATGTATTCACACAT 58.528 36.000 0.00 0.00 41.88 3.21
100 101 6.371271 TGTTGTGGTCTATGTATTCACACATG 59.629 38.462 0.00 0.00 39.46 3.21
101 102 6.048732 TGTGGTCTATGTATTCACACATGT 57.951 37.500 0.00 0.00 39.46 3.21
102 103 7.176589 TGTGGTCTATGTATTCACACATGTA 57.823 36.000 0.00 0.00 39.46 2.29
103 104 7.791029 TGTGGTCTATGTATTCACACATGTAT 58.209 34.615 0.00 0.00 39.46 2.29
104 105 8.264347 TGTGGTCTATGTATTCACACATGTATT 58.736 33.333 0.00 0.00 39.46 1.89
105 106 9.758651 GTGGTCTATGTATTCACACATGTATTA 57.241 33.333 0.00 0.00 39.46 0.98
106 107 9.758651 TGGTCTATGTATTCACACATGTATTAC 57.241 33.333 0.00 0.00 39.46 1.89
107 108 8.912658 GGTCTATGTATTCACACATGTATTACG 58.087 37.037 0.00 0.00 39.46 3.18
108 109 8.912658 GTCTATGTATTCACACATGTATTACGG 58.087 37.037 0.00 0.00 39.46 4.02
109 110 8.635328 TCTATGTATTCACACATGTATTACGGT 58.365 33.333 0.00 0.00 39.46 4.83
110 111 9.256477 CTATGTATTCACACATGTATTACGGTT 57.744 33.333 0.00 0.00 39.46 4.44
111 112 7.908827 TGTATTCACACATGTATTACGGTTT 57.091 32.000 0.00 0.00 0.00 3.27
112 113 7.966111 TGTATTCACACATGTATTACGGTTTC 58.034 34.615 0.00 0.00 0.00 2.78
113 114 5.866335 TTCACACATGTATTACGGTTTCC 57.134 39.130 0.00 0.00 0.00 3.13
114 115 4.895961 TCACACATGTATTACGGTTTCCA 58.104 39.130 0.00 0.00 0.00 3.53
115 116 4.932799 TCACACATGTATTACGGTTTCCAG 59.067 41.667 0.00 0.00 0.00 3.86
116 117 4.693566 CACACATGTATTACGGTTTCCAGT 59.306 41.667 0.00 0.00 0.00 4.00
117 118 5.180492 CACACATGTATTACGGTTTCCAGTT 59.820 40.000 0.00 0.00 0.00 3.16
118 119 6.369340 CACACATGTATTACGGTTTCCAGTTA 59.631 38.462 0.00 0.00 0.00 2.24
119 120 6.935771 ACACATGTATTACGGTTTCCAGTTAA 59.064 34.615 0.00 0.00 0.00 2.01
120 121 7.608761 ACACATGTATTACGGTTTCCAGTTAAT 59.391 33.333 0.00 0.00 0.00 1.40
121 122 9.100554 CACATGTATTACGGTTTCCAGTTAATA 57.899 33.333 0.00 0.00 0.00 0.98
122 123 9.101655 ACATGTATTACGGTTTCCAGTTAATAC 57.898 33.333 0.00 0.00 32.58 1.89
123 124 9.100554 CATGTATTACGGTTTCCAGTTAATACA 57.899 33.333 17.27 17.27 40.70 2.29
124 125 9.669887 ATGTATTACGGTTTCCAGTTAATACAA 57.330 29.630 18.06 9.65 40.20 2.41
125 126 9.669887 TGTATTACGGTTTCCAGTTAATACAAT 57.330 29.630 14.94 0.00 36.55 2.71
131 132 8.833493 ACGGTTTCCAGTTAATACAATTATAGC 58.167 33.333 0.00 0.00 0.00 2.97
132 133 8.832521 CGGTTTCCAGTTAATACAATTATAGCA 58.167 33.333 0.00 0.00 0.00 3.49
155 156 9.346005 AGCATGAACAATAGACAATTATCATGA 57.654 29.630 19.46 0.00 44.39 3.07
156 157 9.955208 GCATGAACAATAGACAATTATCATGAA 57.045 29.630 19.46 0.00 44.39 2.57
198 199 7.839680 AACCATTTTATTATTGCCTCTAGGG 57.160 36.000 0.00 0.00 35.18 3.53
211 212 4.437682 CCTCTAGGGCATATTTCCAACA 57.562 45.455 0.00 0.00 0.00 3.33
237 238 0.811915 ACATCGTCGACCCTTCTCAG 59.188 55.000 10.58 0.00 0.00 3.35
238 239 0.811915 CATCGTCGACCCTTCTCAGT 59.188 55.000 10.58 0.00 0.00 3.41
239 240 1.202582 CATCGTCGACCCTTCTCAGTT 59.797 52.381 10.58 0.00 0.00 3.16
240 241 0.879765 TCGTCGACCCTTCTCAGTTC 59.120 55.000 10.58 0.00 0.00 3.01
241 242 0.882474 CGTCGACCCTTCTCAGTTCT 59.118 55.000 10.58 0.00 0.00 3.01
242 243 1.135632 CGTCGACCCTTCTCAGTTCTC 60.136 57.143 10.58 0.00 0.00 2.87
243 244 1.887198 GTCGACCCTTCTCAGTTCTCA 59.113 52.381 3.51 0.00 0.00 3.27
244 245 1.887198 TCGACCCTTCTCAGTTCTCAC 59.113 52.381 0.00 0.00 0.00 3.51
245 246 1.613925 CGACCCTTCTCAGTTCTCACA 59.386 52.381 0.00 0.00 0.00 3.58
258 259 0.325933 TCTCACACATGCCTCCTTGG 59.674 55.000 0.00 0.00 39.35 3.61
274 275 2.438392 CCTTGGTCTAACCCCATCCTAC 59.562 54.545 0.00 0.00 37.50 3.18
277 278 0.391966 GTCTAACCCCATCCTACGGC 59.608 60.000 0.00 0.00 0.00 5.68
288 289 1.575419 TCCTACGGCCACCTTACAAT 58.425 50.000 2.24 0.00 0.00 2.71
312 313 3.925299 GTGAAAGAAGAGGTTAGTACGGC 59.075 47.826 0.00 0.00 0.00 5.68
337 339 2.462255 AAGCAAAGTGGACGCGCATG 62.462 55.000 5.73 0.00 0.00 4.06
378 380 9.746711 CGAGAGTTGTGTTTATTATCAAGAAAG 57.253 33.333 0.00 0.00 0.00 2.62
380 382 9.574516 AGAGTTGTGTTTATTATCAAGAAAGGT 57.425 29.630 0.00 0.00 0.00 3.50
394 396 7.411486 TCAAGAAAGGTTTCCACACATAAAA 57.589 32.000 0.00 0.00 37.92 1.52
420 422 5.808366 TTGTTGTGAGAGTAAGACCTCAT 57.192 39.130 0.00 0.00 40.95 2.90
421 423 5.392767 TGTTGTGAGAGTAAGACCTCATC 57.607 43.478 0.00 0.00 40.95 2.92
492 499 6.212955 TGGTCCGATTGAAAAACTGAAATTC 58.787 36.000 0.00 0.00 0.00 2.17
508 515 5.581605 TGAAATTCAATTCATTAGCGAGCC 58.418 37.500 0.00 0.00 34.50 4.70
519 526 2.380084 TAGCGAGCCTTTGTTGTAGG 57.620 50.000 0.00 0.00 35.80 3.18
531 538 3.057969 TGTTGTAGGGCACATTCTCTG 57.942 47.619 0.00 0.00 36.90 3.35
532 539 2.637382 TGTTGTAGGGCACATTCTCTGA 59.363 45.455 0.00 0.00 36.90 3.27
535 542 3.106827 TGTAGGGCACATTCTCTGATGA 58.893 45.455 0.00 0.00 30.04 2.92
547 554 7.167302 CACATTCTCTGATGACTTCGATAACTC 59.833 40.741 0.00 0.00 0.00 3.01
556 563 2.764572 ACTTCGATAACTCGGGGTCATT 59.235 45.455 0.00 0.00 45.10 2.57
573 580 4.821805 GGTCATTTCTTGAGGAAAGACACA 59.178 41.667 15.59 0.00 44.77 3.72
574 581 5.049129 GGTCATTTCTTGAGGAAAGACACAG 60.049 44.000 15.59 0.00 44.77 3.66
577 584 6.828273 TCATTTCTTGAGGAAAGACACAGAAA 59.172 34.615 0.00 0.00 44.77 2.52
592 599 7.224297 AGACACAGAAACCTTTTGCTATCTAA 58.776 34.615 0.00 0.00 0.00 2.10
596 603 6.775629 ACAGAAACCTTTTGCTATCTAAACCA 59.224 34.615 0.00 0.00 0.00 3.67
600 607 7.631717 AACCTTTTGCTATCTAAACCAGATC 57.368 36.000 0.00 0.00 43.27 2.75
604 611 5.357742 TTGCTATCTAAACCAGATCTGCA 57.642 39.130 17.76 5.08 44.54 4.41
611 618 2.119801 AACCAGATCTGCATCACACC 57.880 50.000 17.76 0.00 0.00 4.16
622 629 1.358877 CATCACACCGCGATCAAAGA 58.641 50.000 8.23 0.00 0.00 2.52
635 642 4.556898 GCGATCAAAGAGAAGCTCGGTATA 60.557 45.833 0.00 0.00 35.36 1.47
639 646 5.833082 TCAAAGAGAAGCTCGGTATATGAC 58.167 41.667 0.00 0.00 35.36 3.06
648 655 2.221169 TCGGTATATGACGGTTAGCGT 58.779 47.619 9.81 9.81 37.87 5.07
649 656 2.031769 TCGGTATATGACGGTTAGCGTG 60.032 50.000 15.74 0.00 37.87 5.34
653 660 2.267188 TATGACGGTTAGCGTGTGTC 57.733 50.000 15.74 0.00 0.00 3.67
655 662 0.102663 TGACGGTTAGCGTGTGTCAA 59.897 50.000 15.74 0.00 36.69 3.18
656 663 1.269883 TGACGGTTAGCGTGTGTCAAT 60.270 47.619 15.74 0.00 36.69 2.57
657 664 1.796459 GACGGTTAGCGTGTGTCAATT 59.204 47.619 15.74 0.00 0.00 2.32
671 678 0.840617 TCAATTATGGCGGGCCTACA 59.159 50.000 11.55 0.00 36.94 2.74
672 679 1.423541 TCAATTATGGCGGGCCTACAT 59.576 47.619 11.55 13.28 36.94 2.29
689 696 5.520649 GCCTACATTTCAAGTACACTAGAGC 59.479 44.000 0.00 0.00 0.00 4.09
717 724 2.617274 GCTGTGACGGCCAACCTTC 61.617 63.158 4.74 0.00 34.78 3.46
722 729 0.109532 TGACGGCCAACCTTCAATGA 59.890 50.000 2.24 0.00 41.01 2.57
728 735 2.151202 GCCAACCTTCAATGAGAACGA 58.849 47.619 0.00 0.00 31.61 3.85
729 736 2.749621 GCCAACCTTCAATGAGAACGAT 59.250 45.455 0.00 0.00 31.61 3.73
735 742 4.248859 CCTTCAATGAGAACGATGTCTGT 58.751 43.478 0.00 0.00 31.61 3.41
744 751 2.457366 ACGATGTCTGTTTCACTCCC 57.543 50.000 0.00 0.00 0.00 4.30
745 752 1.002087 ACGATGTCTGTTTCACTCCCC 59.998 52.381 0.00 0.00 0.00 4.81
749 756 1.694150 TGTCTGTTTCACTCCCCTCTG 59.306 52.381 0.00 0.00 0.00 3.35
759 766 3.397618 TCACTCCCCTCTGAATGGAAAAA 59.602 43.478 0.00 0.00 0.00 1.94
836 853 6.737720 AGGACTAGATATGCACTTCAATCA 57.262 37.500 0.00 0.00 0.00 2.57
927 4055 3.905249 GGAAACCCATCTCCACGC 58.095 61.111 0.00 0.00 0.00 5.34
928 4056 1.002624 GGAAACCCATCTCCACGCA 60.003 57.895 0.00 0.00 0.00 5.24
929 4057 1.305930 GGAAACCCATCTCCACGCAC 61.306 60.000 0.00 0.00 0.00 5.34
958 4086 3.808656 GCTTGCTCTTGCTCGGCC 61.809 66.667 0.00 0.00 40.48 6.13
1354 4506 7.704472 CGAGGAGATGTAGCATAGGAAATATTC 59.296 40.741 0.00 0.00 0.00 1.75
1422 4574 0.181350 AGAATCAGGGGCGTCCATTC 59.819 55.000 9.07 9.06 38.24 2.67
1423 4575 0.107214 GAATCAGGGGCGTCCATTCA 60.107 55.000 9.07 0.00 38.24 2.57
1424 4576 0.552848 AATCAGGGGCGTCCATTCAT 59.447 50.000 9.07 0.00 38.24 2.57
1425 4577 0.552848 ATCAGGGGCGTCCATTCATT 59.447 50.000 9.07 0.00 38.24 2.57
1442 4594 5.467902 TTCATTTGTTGCTTTGCTTGAAC 57.532 34.783 0.00 0.00 0.00 3.18
1450 4602 5.871524 TGTTGCTTTGCTTGAACAAATTGTA 59.128 32.000 0.00 0.00 38.76 2.41
1557 4710 0.988832 TTGGGGGAGTAATTCGCTGT 59.011 50.000 0.00 0.00 38.70 4.40
1580 4733 2.401766 GCAGGGAATGGCTGTCGTG 61.402 63.158 0.00 0.00 0.00 4.35
1627 4780 3.640967 CCTTGCTGGTAAGAGAGATAGCT 59.359 47.826 0.00 0.00 32.66 3.32
1645 4798 1.783071 CTCCCCCTCCTTCTGTAGAC 58.217 60.000 0.00 0.00 0.00 2.59
1653 4806 5.105064 CCCCTCCTTCTGTAGACGAATTTTA 60.105 44.000 0.00 0.00 0.00 1.52
1690 4843 3.238108 TGTGCGTGTTGGTTTGATTTT 57.762 38.095 0.00 0.00 0.00 1.82
1691 4844 3.589988 TGTGCGTGTTGGTTTGATTTTT 58.410 36.364 0.00 0.00 0.00 1.94
1747 4900 1.842920 TGTCCTCTGCAGCTGGGAA 60.843 57.895 17.12 10.01 0.00 3.97
1760 4913 1.937546 CTGGGAATTGGCCTTGACGC 61.938 60.000 3.32 2.53 0.00 5.19
1765 4918 0.883833 AATTGGCCTTGACGCTGAAG 59.116 50.000 3.32 0.00 0.00 3.02
1918 5072 0.376852 GCACACACTGCGAACTTTGA 59.623 50.000 0.00 0.00 35.72 2.69
1930 5085 6.699204 ACTGCGAACTTTGATGACATCTATAG 59.301 38.462 16.25 12.13 0.00 1.31
2046 5203 5.870978 GCACAATCCTGCTGATGTTTTAATT 59.129 36.000 0.00 0.00 34.06 1.40
2053 5210 9.643693 ATCCTGCTGATGTTTTAATTTAACTTG 57.356 29.630 0.00 0.00 30.54 3.16
2072 5229 2.615391 TGTTCACCTCATGTGGGACTA 58.385 47.619 17.76 0.00 45.48 2.59
2364 5521 0.526096 GCCATTGGCTGCATTGTACG 60.526 55.000 20.66 0.00 46.69 3.67
2407 5564 9.342308 GATCCCATAGAAATGTGACTATTTTGA 57.658 33.333 0.00 0.00 30.78 2.69
2455 5612 2.976903 GGGCCAGCGATCATGAGC 60.977 66.667 4.39 0.00 0.00 4.26
2468 6492 6.822170 AGCGATCATGAGCATATGTAATGATT 59.178 34.615 20.92 10.31 37.93 2.57
2514 6538 2.037251 TGTTGCTACTGTGGTTCTCCTC 59.963 50.000 0.00 0.00 34.23 3.71
2516 6540 0.889306 GCTACTGTGGTTCTCCTCGT 59.111 55.000 0.00 0.00 34.23 4.18
2521 6545 2.288886 ACTGTGGTTCTCCTCGTTAAGC 60.289 50.000 0.00 0.00 34.23 3.09
2597 6623 6.821388 AGGTAAATGAGATAGACACATGGAC 58.179 40.000 0.00 0.00 30.79 4.02
2603 6629 6.149129 TGAGATAGACACATGGACATACAC 57.851 41.667 0.00 0.00 0.00 2.90
2680 6720 6.769341 ACAAAACCATTTTACTTACTCCGTCT 59.231 34.615 0.00 0.00 0.00 4.18
3023 7066 9.151471 TGCAACTACTATCTGAACTTCATTAAC 57.849 33.333 0.00 0.00 0.00 2.01
3055 7098 4.709397 AGAGTCTTCTTGATCGATGGAACT 59.291 41.667 0.54 0.05 0.00 3.01
3219 7262 4.702131 GCCTGATGTTGAATCCTACAAACT 59.298 41.667 0.00 0.00 32.24 2.66
3271 7314 2.621055 TCCTAACACACAACAATGCCAC 59.379 45.455 0.00 0.00 0.00 5.01
3338 7489 1.549243 TTATGTCAGCGCAGGGTCCA 61.549 55.000 11.47 0.00 0.00 4.02
3353 7504 5.192927 CAGGGTCCATTCTTACTGCATAAA 58.807 41.667 0.00 0.00 0.00 1.40
3474 7749 9.748708 CCCATGTACATGTATTAAGATTTTTGG 57.251 33.333 29.25 16.40 37.11 3.28
3639 7926 4.660938 GCCGGGTGCTTCTTGGGT 62.661 66.667 2.18 0.00 36.87 4.51
3653 7940 6.777580 TGCTTCTTGGGTCTTTCTTCTAAAAT 59.222 34.615 0.00 0.00 0.00 1.82
3654 7941 7.942341 TGCTTCTTGGGTCTTTCTTCTAAAATA 59.058 33.333 0.00 0.00 0.00 1.40
3716 8003 5.308976 TGCATATATCCACAAGTGTCCAT 57.691 39.130 0.00 0.00 0.00 3.41
3786 8075 4.040461 TGGGCAGTACTAATATCAAGGAGC 59.960 45.833 0.00 0.00 0.00 4.70
3839 8128 1.229336 CCCAGTCTCTGACCCACCT 60.229 63.158 0.00 0.00 32.44 4.00
3868 8157 2.092699 GGAGACCAAGGAAGCTGCTATT 60.093 50.000 0.90 0.00 0.00 1.73
3950 8239 5.966742 AAGCCTTTTTGGAGTTACATCTC 57.033 39.130 0.00 0.00 38.35 2.75
3951 8240 4.003648 AGCCTTTTTGGAGTTACATCTCG 58.996 43.478 0.00 0.00 38.35 4.04
3952 8241 3.751698 GCCTTTTTGGAGTTACATCTCGT 59.248 43.478 0.00 0.00 38.35 4.18
3953 8242 4.215613 GCCTTTTTGGAGTTACATCTCGTT 59.784 41.667 0.00 0.00 38.35 3.85
3954 8243 5.689819 CCTTTTTGGAGTTACATCTCGTTG 58.310 41.667 0.00 0.00 38.35 4.10
3955 8244 5.468746 CCTTTTTGGAGTTACATCTCGTTGA 59.531 40.000 0.00 0.00 38.35 3.18
3956 8245 6.347725 CCTTTTTGGAGTTACATCTCGTTGAG 60.348 42.308 0.00 0.00 38.35 3.02
3957 8246 4.866508 TTGGAGTTACATCTCGTTGAGT 57.133 40.909 0.00 0.00 35.52 3.41
3958 8247 5.970317 TTGGAGTTACATCTCGTTGAGTA 57.030 39.130 0.00 0.00 35.52 2.59
3959 8248 6.525578 TTGGAGTTACATCTCGTTGAGTAT 57.474 37.500 0.00 0.00 35.52 2.12
3960 8249 7.634671 TTGGAGTTACATCTCGTTGAGTATA 57.365 36.000 0.00 0.00 35.52 1.47
3961 8250 7.818997 TGGAGTTACATCTCGTTGAGTATAT 57.181 36.000 0.00 0.00 35.52 0.86
3962 8251 8.234136 TGGAGTTACATCTCGTTGAGTATATT 57.766 34.615 0.00 0.00 35.52 1.28
3963 8252 8.135529 TGGAGTTACATCTCGTTGAGTATATTG 58.864 37.037 0.00 0.00 35.52 1.90
3964 8253 8.350722 GGAGTTACATCTCGTTGAGTATATTGA 58.649 37.037 0.00 0.00 35.52 2.57
3965 8254 9.900710 GAGTTACATCTCGTTGAGTATATTGAT 57.099 33.333 0.00 0.00 0.00 2.57
3993 8282 9.802039 ATTAAGAAAGACGAGATAGACTAGGAT 57.198 33.333 0.00 0.00 0.00 3.24
3994 8283 9.629878 TTAAGAAAGACGAGATAGACTAGGATT 57.370 33.333 0.00 0.00 0.00 3.01
3995 8284 8.528044 AAGAAAGACGAGATAGACTAGGATTT 57.472 34.615 0.00 0.00 0.00 2.17
3996 8285 7.936584 AGAAAGACGAGATAGACTAGGATTTG 58.063 38.462 0.00 0.00 0.00 2.32
3997 8286 7.558444 AGAAAGACGAGATAGACTAGGATTTGT 59.442 37.037 0.00 0.00 0.00 2.83
3998 8287 7.648039 AAGACGAGATAGACTAGGATTTGTT 57.352 36.000 0.00 0.00 0.00 2.83
3999 8288 7.266922 AGACGAGATAGACTAGGATTTGTTC 57.733 40.000 0.00 0.00 0.00 3.18
4000 8289 7.057894 AGACGAGATAGACTAGGATTTGTTCT 58.942 38.462 0.00 0.00 0.00 3.01
4001 8290 7.012894 AGACGAGATAGACTAGGATTTGTTCTG 59.987 40.741 0.00 0.00 0.00 3.02
4002 8291 6.039941 ACGAGATAGACTAGGATTTGTTCTGG 59.960 42.308 0.00 0.00 0.00 3.86
4003 8292 6.039941 CGAGATAGACTAGGATTTGTTCTGGT 59.960 42.308 0.00 0.00 0.00 4.00
4004 8293 7.416890 CGAGATAGACTAGGATTTGTTCTGGTT 60.417 40.741 0.00 0.00 0.00 3.67
4005 8294 8.152023 AGATAGACTAGGATTTGTTCTGGTTT 57.848 34.615 0.00 0.00 0.00 3.27
4006 8295 8.043710 AGATAGACTAGGATTTGTTCTGGTTTG 58.956 37.037 0.00 0.00 0.00 2.93
4007 8296 5.941788 AGACTAGGATTTGTTCTGGTTTGT 58.058 37.500 0.00 0.00 0.00 2.83
4008 8297 5.998363 AGACTAGGATTTGTTCTGGTTTGTC 59.002 40.000 0.00 0.00 0.00 3.18
4009 8298 5.941788 ACTAGGATTTGTTCTGGTTTGTCT 58.058 37.500 0.00 0.00 0.00 3.41
4010 8299 6.365520 ACTAGGATTTGTTCTGGTTTGTCTT 58.634 36.000 0.00 0.00 0.00 3.01
4011 8300 5.520376 AGGATTTGTTCTGGTTTGTCTTG 57.480 39.130 0.00 0.00 0.00 3.02
4012 8301 4.956075 AGGATTTGTTCTGGTTTGTCTTGT 59.044 37.500 0.00 0.00 0.00 3.16
4013 8302 6.126409 AGGATTTGTTCTGGTTTGTCTTGTA 58.874 36.000 0.00 0.00 0.00 2.41
4014 8303 6.039382 AGGATTTGTTCTGGTTTGTCTTGTAC 59.961 38.462 0.00 0.00 0.00 2.90
4015 8304 6.039382 GGATTTGTTCTGGTTTGTCTTGTACT 59.961 38.462 0.00 0.00 0.00 2.73
4016 8305 6.431198 TTTGTTCTGGTTTGTCTTGTACTC 57.569 37.500 0.00 0.00 0.00 2.59
4017 8306 4.448210 TGTTCTGGTTTGTCTTGTACTCC 58.552 43.478 0.00 0.00 0.00 3.85
4018 8307 4.080807 TGTTCTGGTTTGTCTTGTACTCCA 60.081 41.667 0.00 0.00 0.00 3.86
4019 8308 4.764050 TCTGGTTTGTCTTGTACTCCAA 57.236 40.909 0.00 0.00 0.00 3.53
4020 8309 5.105567 TCTGGTTTGTCTTGTACTCCAAA 57.894 39.130 0.00 0.00 31.20 3.28
4021 8310 5.690865 TCTGGTTTGTCTTGTACTCCAAAT 58.309 37.500 0.00 0.00 31.20 2.32
4022 8311 6.126409 TCTGGTTTGTCTTGTACTCCAAATT 58.874 36.000 0.00 0.00 31.20 1.82
4023 8312 6.039270 TCTGGTTTGTCTTGTACTCCAAATTG 59.961 38.462 0.00 0.00 31.20 2.32
4024 8313 5.068460 TGGTTTGTCTTGTACTCCAAATTGG 59.932 40.000 5.48 5.48 39.43 3.16
4025 8314 5.068591 GGTTTGTCTTGTACTCCAAATTGGT 59.931 40.000 12.28 0.00 39.03 3.67
4026 8315 6.206498 GTTTGTCTTGTACTCCAAATTGGTC 58.794 40.000 12.28 2.67 39.03 4.02
4027 8316 5.042463 TGTCTTGTACTCCAAATTGGTCA 57.958 39.130 12.28 5.11 39.03 4.02
4028 8317 5.630121 TGTCTTGTACTCCAAATTGGTCAT 58.370 37.500 12.28 1.57 39.03 3.06
4029 8318 6.068010 TGTCTTGTACTCCAAATTGGTCATT 58.932 36.000 12.28 0.00 39.03 2.57
4030 8319 6.016360 TGTCTTGTACTCCAAATTGGTCATTG 60.016 38.462 12.28 1.76 39.03 2.82
4031 8320 6.016276 GTCTTGTACTCCAAATTGGTCATTGT 60.016 38.462 12.28 7.14 39.03 2.71
4032 8321 7.174253 GTCTTGTACTCCAAATTGGTCATTGTA 59.826 37.037 12.28 6.28 39.03 2.41
4033 8322 6.811253 TGTACTCCAAATTGGTCATTGTAC 57.189 37.500 12.28 16.03 39.03 2.90
4034 8323 6.539173 TGTACTCCAAATTGGTCATTGTACT 58.461 36.000 12.28 0.00 39.03 2.73
4035 8324 7.001674 TGTACTCCAAATTGGTCATTGTACTT 58.998 34.615 12.28 0.00 39.03 2.24
4036 8325 6.575162 ACTCCAAATTGGTCATTGTACTTC 57.425 37.500 12.28 0.00 39.03 3.01
4037 8326 6.306987 ACTCCAAATTGGTCATTGTACTTCT 58.693 36.000 12.28 0.00 39.03 2.85
4038 8327 7.458397 ACTCCAAATTGGTCATTGTACTTCTA 58.542 34.615 12.28 0.00 39.03 2.10
4039 8328 8.109634 ACTCCAAATTGGTCATTGTACTTCTAT 58.890 33.333 12.28 0.00 39.03 1.98
4040 8329 9.613428 CTCCAAATTGGTCATTGTACTTCTATA 57.387 33.333 12.28 0.00 39.03 1.31
4049 8338 9.765795 GGTCATTGTACTTCTATATATATGCCC 57.234 37.037 5.44 0.00 0.00 5.36
4055 8344 9.147732 TGTACTTCTATATATATGCCCATGAGG 57.852 37.037 5.44 0.00 39.47 3.86
4064 8353 4.749323 CCCATGAGGCTCAAGCAA 57.251 55.556 22.84 0.00 44.36 3.91
4065 8354 3.202548 CCCATGAGGCTCAAGCAAT 57.797 52.632 22.84 0.66 44.36 3.56
4066 8355 2.353357 CCCATGAGGCTCAAGCAATA 57.647 50.000 22.84 0.00 44.36 1.90
4067 8356 1.952296 CCCATGAGGCTCAAGCAATAC 59.048 52.381 22.84 0.00 44.36 1.89
4068 8357 2.646930 CCATGAGGCTCAAGCAATACA 58.353 47.619 22.84 0.00 44.36 2.29
4069 8358 3.018856 CCATGAGGCTCAAGCAATACAA 58.981 45.455 22.84 0.00 44.36 2.41
4070 8359 3.181493 CCATGAGGCTCAAGCAATACAAC 60.181 47.826 22.84 0.00 44.36 3.32
4071 8360 2.076100 TGAGGCTCAAGCAATACAACG 58.924 47.619 16.28 0.00 44.36 4.10
4072 8361 2.289382 TGAGGCTCAAGCAATACAACGA 60.289 45.455 16.28 0.00 44.36 3.85
4073 8362 2.742053 GAGGCTCAAGCAATACAACGAA 59.258 45.455 10.25 0.00 44.36 3.85
4074 8363 2.484264 AGGCTCAAGCAATACAACGAAC 59.516 45.455 4.13 0.00 44.36 3.95
4075 8364 2.484264 GGCTCAAGCAATACAACGAACT 59.516 45.455 4.13 0.00 44.36 3.01
4076 8365 3.682858 GGCTCAAGCAATACAACGAACTA 59.317 43.478 4.13 0.00 44.36 2.24
4077 8366 4.332819 GGCTCAAGCAATACAACGAACTAT 59.667 41.667 4.13 0.00 44.36 2.12
4078 8367 5.163754 GGCTCAAGCAATACAACGAACTATT 60.164 40.000 4.13 0.00 44.36 1.73
4079 8368 6.314784 GCTCAAGCAATACAACGAACTATTT 58.685 36.000 0.00 0.00 41.59 1.40
4080 8369 6.466097 GCTCAAGCAATACAACGAACTATTTC 59.534 38.462 0.00 0.00 41.59 2.17
4081 8370 7.428282 TCAAGCAATACAACGAACTATTTCA 57.572 32.000 0.00 0.00 0.00 2.69
4082 8371 7.295201 TCAAGCAATACAACGAACTATTTCAC 58.705 34.615 0.00 0.00 0.00 3.18
4083 8372 6.178239 AGCAATACAACGAACTATTTCACC 57.822 37.500 0.00 0.00 0.00 4.02
4084 8373 5.703592 AGCAATACAACGAACTATTTCACCA 59.296 36.000 0.00 0.00 0.00 4.17
4085 8374 6.205853 AGCAATACAACGAACTATTTCACCAA 59.794 34.615 0.00 0.00 0.00 3.67
4086 8375 7.027161 GCAATACAACGAACTATTTCACCAAT 58.973 34.615 0.00 0.00 0.00 3.16
4087 8376 7.218204 GCAATACAACGAACTATTTCACCAATC 59.782 37.037 0.00 0.00 0.00 2.67
4088 8377 7.915293 ATACAACGAACTATTTCACCAATCA 57.085 32.000 0.00 0.00 0.00 2.57
4089 8378 6.817765 ACAACGAACTATTTCACCAATCAT 57.182 33.333 0.00 0.00 0.00 2.45
4090 8379 6.842163 ACAACGAACTATTTCACCAATCATC 58.158 36.000 0.00 0.00 0.00 2.92
4091 8380 6.429692 ACAACGAACTATTTCACCAATCATCA 59.570 34.615 0.00 0.00 0.00 3.07
4092 8381 6.422776 ACGAACTATTTCACCAATCATCAC 57.577 37.500 0.00 0.00 0.00 3.06
4093 8382 6.173339 ACGAACTATTTCACCAATCATCACT 58.827 36.000 0.00 0.00 0.00 3.41
4094 8383 6.313905 ACGAACTATTTCACCAATCATCACTC 59.686 38.462 0.00 0.00 0.00 3.51
4095 8384 6.536582 CGAACTATTTCACCAATCATCACTCT 59.463 38.462 0.00 0.00 0.00 3.24
4096 8385 7.254252 CGAACTATTTCACCAATCATCACTCTC 60.254 40.741 0.00 0.00 0.00 3.20
4097 8386 6.352516 ACTATTTCACCAATCATCACTCTCC 58.647 40.000 0.00 0.00 0.00 3.71
4098 8387 3.634397 TTCACCAATCATCACTCTCCC 57.366 47.619 0.00 0.00 0.00 4.30
4099 8388 2.837947 TCACCAATCATCACTCTCCCT 58.162 47.619 0.00 0.00 0.00 4.20
4100 8389 3.184628 TCACCAATCATCACTCTCCCTT 58.815 45.455 0.00 0.00 0.00 3.95
4101 8390 3.198635 TCACCAATCATCACTCTCCCTTC 59.801 47.826 0.00 0.00 0.00 3.46
4102 8391 2.169352 ACCAATCATCACTCTCCCTTCG 59.831 50.000 0.00 0.00 0.00 3.79
4103 8392 2.432146 CCAATCATCACTCTCCCTTCGA 59.568 50.000 0.00 0.00 0.00 3.71
4104 8393 3.118629 CCAATCATCACTCTCCCTTCGAA 60.119 47.826 0.00 0.00 0.00 3.71
4105 8394 3.810310 ATCATCACTCTCCCTTCGAAC 57.190 47.619 0.00 0.00 0.00 3.95
4106 8395 2.525368 TCATCACTCTCCCTTCGAACA 58.475 47.619 0.00 0.00 0.00 3.18
4107 8396 3.099905 TCATCACTCTCCCTTCGAACAT 58.900 45.455 0.00 0.00 0.00 2.71
4108 8397 3.118992 TCATCACTCTCCCTTCGAACATG 60.119 47.826 0.00 0.00 0.00 3.21
4109 8398 1.550524 TCACTCTCCCTTCGAACATGG 59.449 52.381 0.00 0.00 0.00 3.66
4110 8399 1.276421 CACTCTCCCTTCGAACATGGT 59.724 52.381 0.00 0.00 0.00 3.55
4111 8400 2.496070 CACTCTCCCTTCGAACATGGTA 59.504 50.000 0.00 0.00 0.00 3.25
4112 8401 3.133003 CACTCTCCCTTCGAACATGGTAT 59.867 47.826 0.00 0.00 0.00 2.73
4113 8402 3.385111 ACTCTCCCTTCGAACATGGTATC 59.615 47.826 0.00 0.00 0.00 2.24
4114 8403 3.371034 TCTCCCTTCGAACATGGTATCA 58.629 45.455 0.00 0.00 0.00 2.15
4115 8404 3.384789 TCTCCCTTCGAACATGGTATCAG 59.615 47.826 0.00 0.00 0.00 2.90
4116 8405 2.158957 TCCCTTCGAACATGGTATCAGC 60.159 50.000 0.00 0.00 0.00 4.26
4117 8406 2.158900 CCCTTCGAACATGGTATCAGCT 60.159 50.000 0.00 0.00 0.00 4.24
4118 8407 3.535561 CCTTCGAACATGGTATCAGCTT 58.464 45.455 0.00 0.00 0.00 3.74
4119 8408 4.442893 CCCTTCGAACATGGTATCAGCTTA 60.443 45.833 0.00 0.00 0.00 3.09
4120 8409 5.116180 CCTTCGAACATGGTATCAGCTTAA 58.884 41.667 0.00 0.00 0.00 1.85
4121 8410 5.006746 CCTTCGAACATGGTATCAGCTTAAC 59.993 44.000 0.00 0.00 0.00 2.01
4122 8411 4.439057 TCGAACATGGTATCAGCTTAACC 58.561 43.478 0.00 2.51 0.00 2.85
4123 8412 3.245284 CGAACATGGTATCAGCTTAACCG 59.755 47.826 0.00 0.00 35.98 4.44
4124 8413 4.439057 GAACATGGTATCAGCTTAACCGA 58.561 43.478 0.00 0.00 35.98 4.69
4125 8414 4.689612 ACATGGTATCAGCTTAACCGAT 57.310 40.909 0.00 0.00 35.98 4.18
4126 8415 5.036117 ACATGGTATCAGCTTAACCGATT 57.964 39.130 0.00 0.00 35.98 3.34
4127 8416 5.057149 ACATGGTATCAGCTTAACCGATTC 58.943 41.667 0.00 0.00 35.98 2.52
4128 8417 4.746535 TGGTATCAGCTTAACCGATTCA 57.253 40.909 4.81 0.00 35.98 2.57
4129 8418 5.092554 TGGTATCAGCTTAACCGATTCAA 57.907 39.130 4.81 0.00 35.98 2.69
4130 8419 4.873827 TGGTATCAGCTTAACCGATTCAAC 59.126 41.667 4.81 0.00 35.98 3.18
4131 8420 4.272748 GGTATCAGCTTAACCGATTCAACC 59.727 45.833 0.00 0.00 0.00 3.77
4132 8421 2.706890 TCAGCTTAACCGATTCAACCC 58.293 47.619 0.00 0.00 0.00 4.11
4133 8422 2.304761 TCAGCTTAACCGATTCAACCCT 59.695 45.455 0.00 0.00 0.00 4.34
4134 8423 3.516300 TCAGCTTAACCGATTCAACCCTA 59.484 43.478 0.00 0.00 0.00 3.53
4135 8424 3.871594 CAGCTTAACCGATTCAACCCTAG 59.128 47.826 0.00 0.00 0.00 3.02
4136 8425 2.612672 GCTTAACCGATTCAACCCTAGC 59.387 50.000 0.00 0.00 0.00 3.42
4137 8426 2.994186 TAACCGATTCAACCCTAGCC 57.006 50.000 0.00 0.00 0.00 3.93
4138 8427 0.107848 AACCGATTCAACCCTAGCCG 60.108 55.000 0.00 0.00 0.00 5.52
4139 8428 1.887707 CCGATTCAACCCTAGCCGC 60.888 63.158 0.00 0.00 0.00 6.53
4140 8429 1.144057 CGATTCAACCCTAGCCGCT 59.856 57.895 0.00 0.00 0.00 5.52
4141 8430 1.154205 CGATTCAACCCTAGCCGCTG 61.154 60.000 2.16 0.00 0.00 5.18
4142 8431 1.440145 GATTCAACCCTAGCCGCTGC 61.440 60.000 2.16 0.00 37.95 5.25
4143 8432 2.893682 ATTCAACCCTAGCCGCTGCC 62.894 60.000 2.16 0.00 38.69 4.85
4156 8445 4.379243 CTGCCCGTCGCTTCCACT 62.379 66.667 0.00 0.00 38.78 4.00
4157 8446 4.373116 TGCCCGTCGCTTCCACTC 62.373 66.667 0.00 0.00 38.78 3.51
4159 8448 4.796231 CCCGTCGCTTCCACTCCG 62.796 72.222 0.00 0.00 0.00 4.63
4160 8449 4.052229 CCGTCGCTTCCACTCCGT 62.052 66.667 0.00 0.00 0.00 4.69
4161 8450 2.805353 CGTCGCTTCCACTCCGTG 60.805 66.667 0.00 0.00 0.00 4.94
4162 8451 3.112709 GTCGCTTCCACTCCGTGC 61.113 66.667 0.00 0.00 31.34 5.34
4163 8452 4.717629 TCGCTTCCACTCCGTGCG 62.718 66.667 0.00 0.00 46.71 5.34
4193 8482 4.530857 CGGTCGGCCTCCATGACC 62.531 72.222 14.89 14.89 46.91 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.667595 TCCTGACCATGGACATTGGA 58.332 50.000 21.47 18.93 0.00 3.53
1 2 2.493278 GTTTCCTGACCATGGACATTGG 59.507 50.000 21.47 16.85 32.65 3.16
2 3 2.493278 GGTTTCCTGACCATGGACATTG 59.507 50.000 21.47 12.72 39.57 2.82
5 6 1.144691 TGGTTTCCTGACCATGGACA 58.855 50.000 21.47 18.47 44.53 4.02
12 13 4.236527 AGATGGTTATGGTTTCCTGACC 57.763 45.455 0.00 0.00 40.23 4.02
13 14 7.054124 TCAATAGATGGTTATGGTTTCCTGAC 58.946 38.462 0.00 0.00 0.00 3.51
14 15 7.206789 TCAATAGATGGTTATGGTTTCCTGA 57.793 36.000 0.00 0.00 0.00 3.86
15 16 7.720957 TGATCAATAGATGGTTATGGTTTCCTG 59.279 37.037 0.00 0.00 33.72 3.86
16 17 7.815383 TGATCAATAGATGGTTATGGTTTCCT 58.185 34.615 0.00 0.00 33.72 3.36
17 18 8.352942 GTTGATCAATAGATGGTTATGGTTTCC 58.647 37.037 12.12 0.00 33.72 3.13
18 19 8.070171 CGTTGATCAATAGATGGTTATGGTTTC 58.930 37.037 12.12 0.00 33.72 2.78
19 20 7.773224 TCGTTGATCAATAGATGGTTATGGTTT 59.227 33.333 12.12 0.00 33.72 3.27
20 21 7.279615 TCGTTGATCAATAGATGGTTATGGTT 58.720 34.615 12.12 0.00 33.72 3.67
21 22 6.826668 TCGTTGATCAATAGATGGTTATGGT 58.173 36.000 12.12 0.00 33.72 3.55
22 23 6.128445 GCTCGTTGATCAATAGATGGTTATGG 60.128 42.308 19.51 7.58 33.72 2.74
23 24 6.648310 AGCTCGTTGATCAATAGATGGTTATG 59.352 38.462 19.51 8.11 33.72 1.90
24 25 6.763355 AGCTCGTTGATCAATAGATGGTTAT 58.237 36.000 19.51 2.79 33.72 1.89
25 26 6.161855 AGCTCGTTGATCAATAGATGGTTA 57.838 37.500 19.51 0.00 33.72 2.85
26 27 5.028549 AGCTCGTTGATCAATAGATGGTT 57.971 39.130 19.51 6.05 33.72 3.67
27 28 4.679373 AGCTCGTTGATCAATAGATGGT 57.321 40.909 19.51 14.02 33.72 3.55
28 29 5.777802 ACTAGCTCGTTGATCAATAGATGG 58.222 41.667 19.51 17.62 33.72 3.51
29 30 6.442112 TGACTAGCTCGTTGATCAATAGATG 58.558 40.000 19.51 12.48 33.72 2.90
30 31 6.641169 TGACTAGCTCGTTGATCAATAGAT 57.359 37.500 19.51 16.66 37.13 1.98
31 32 6.095580 AGTTGACTAGCTCGTTGATCAATAGA 59.904 38.462 19.51 16.55 0.00 1.98
32 33 6.269315 AGTTGACTAGCTCGTTGATCAATAG 58.731 40.000 12.12 13.07 0.00 1.73
33 34 6.208988 AGTTGACTAGCTCGTTGATCAATA 57.791 37.500 12.12 2.38 0.00 1.90
34 35 5.078411 AGTTGACTAGCTCGTTGATCAAT 57.922 39.130 12.12 0.00 0.00 2.57
35 36 4.521130 AGTTGACTAGCTCGTTGATCAA 57.479 40.909 3.38 3.38 0.00 2.57
36 37 4.941873 TCTAGTTGACTAGCTCGTTGATCA 59.058 41.667 12.30 0.00 44.24 2.92
37 38 5.487153 TCTAGTTGACTAGCTCGTTGATC 57.513 43.478 12.30 0.00 44.24 2.92
38 39 4.336993 CCTCTAGTTGACTAGCTCGTTGAT 59.663 45.833 12.30 0.00 44.24 2.57
39 40 3.690139 CCTCTAGTTGACTAGCTCGTTGA 59.310 47.826 12.30 0.00 44.24 3.18
40 41 3.732471 GCCTCTAGTTGACTAGCTCGTTG 60.732 52.174 12.30 0.75 44.24 4.10
41 42 2.424246 GCCTCTAGTTGACTAGCTCGTT 59.576 50.000 12.30 0.00 44.24 3.85
42 43 2.018515 GCCTCTAGTTGACTAGCTCGT 58.981 52.381 12.30 0.00 44.24 4.18
43 44 2.294074 AGCCTCTAGTTGACTAGCTCG 58.706 52.381 12.30 0.00 44.24 5.03
44 45 4.885325 AGTAAGCCTCTAGTTGACTAGCTC 59.115 45.833 12.30 5.16 44.24 4.09
45 46 4.862371 AGTAAGCCTCTAGTTGACTAGCT 58.138 43.478 12.30 5.64 44.24 3.32
46 47 5.239963 CCTAGTAAGCCTCTAGTTGACTAGC 59.760 48.000 12.30 3.61 44.24 3.42
47 48 5.766174 CCCTAGTAAGCCTCTAGTTGACTAG 59.234 48.000 11.14 11.14 45.57 2.57
48 49 5.431073 TCCCTAGTAAGCCTCTAGTTGACTA 59.569 44.000 0.00 0.00 34.72 2.59
49 50 4.230041 TCCCTAGTAAGCCTCTAGTTGACT 59.770 45.833 0.00 0.00 34.72 3.41
50 51 4.338964 GTCCCTAGTAAGCCTCTAGTTGAC 59.661 50.000 0.00 8.18 34.72 3.18
51 52 4.017775 TGTCCCTAGTAAGCCTCTAGTTGA 60.018 45.833 0.00 1.98 34.72 3.18
52 53 4.279145 TGTCCCTAGTAAGCCTCTAGTTG 58.721 47.826 0.00 0.00 34.72 3.16
53 54 4.604784 TGTCCCTAGTAAGCCTCTAGTT 57.395 45.455 0.00 0.00 34.72 2.24
54 55 4.079096 ACATGTCCCTAGTAAGCCTCTAGT 60.079 45.833 0.00 0.00 34.72 2.57
55 56 4.475345 ACATGTCCCTAGTAAGCCTCTAG 58.525 47.826 0.00 0.00 35.86 2.43
56 57 4.537945 ACATGTCCCTAGTAAGCCTCTA 57.462 45.455 0.00 0.00 0.00 2.43
57 58 3.406512 ACATGTCCCTAGTAAGCCTCT 57.593 47.619 0.00 0.00 0.00 3.69
58 59 3.197983 ACAACATGTCCCTAGTAAGCCTC 59.802 47.826 0.00 0.00 0.00 4.70
59 60 3.055094 CACAACATGTCCCTAGTAAGCCT 60.055 47.826 0.00 0.00 0.00 4.58
60 61 3.270877 CACAACATGTCCCTAGTAAGCC 58.729 50.000 0.00 0.00 0.00 4.35
61 62 3.270877 CCACAACATGTCCCTAGTAAGC 58.729 50.000 0.00 0.00 0.00 3.09
62 63 4.223032 AGACCACAACATGTCCCTAGTAAG 59.777 45.833 0.00 0.00 31.76 2.34
63 64 4.164981 AGACCACAACATGTCCCTAGTAA 58.835 43.478 0.00 0.00 31.76 2.24
64 65 3.786553 AGACCACAACATGTCCCTAGTA 58.213 45.455 0.00 0.00 31.76 1.82
65 66 2.621070 AGACCACAACATGTCCCTAGT 58.379 47.619 0.00 0.00 31.76 2.57
66 67 4.162320 ACATAGACCACAACATGTCCCTAG 59.838 45.833 0.00 0.00 31.76 3.02
67 68 4.101114 ACATAGACCACAACATGTCCCTA 58.899 43.478 0.00 0.00 31.76 3.53
68 69 2.912956 ACATAGACCACAACATGTCCCT 59.087 45.455 0.00 0.00 31.76 4.20
69 70 3.350219 ACATAGACCACAACATGTCCC 57.650 47.619 0.00 0.00 31.76 4.46
70 71 6.037172 GTGAATACATAGACCACAACATGTCC 59.963 42.308 0.00 0.00 33.78 4.02
71 72 6.593770 TGTGAATACATAGACCACAACATGTC 59.406 38.462 0.00 0.00 35.16 3.06
72 73 6.371548 GTGTGAATACATAGACCACAACATGT 59.628 38.462 0.00 0.00 39.13 3.21
73 74 6.371271 TGTGTGAATACATAGACCACAACATG 59.629 38.462 0.00 0.00 39.13 3.21
74 75 6.472016 TGTGTGAATACATAGACCACAACAT 58.528 36.000 0.00 0.00 39.13 2.71
75 76 5.859495 TGTGTGAATACATAGACCACAACA 58.141 37.500 0.00 0.00 39.13 3.33
76 77 6.371548 ACATGTGTGAATACATAGACCACAAC 59.628 38.462 0.00 0.00 39.17 3.32
77 78 6.472016 ACATGTGTGAATACATAGACCACAA 58.528 36.000 0.00 0.00 39.17 3.33
78 79 6.048732 ACATGTGTGAATACATAGACCACA 57.951 37.500 0.00 0.00 39.17 4.17
79 80 8.662781 AATACATGTGTGAATACATAGACCAC 57.337 34.615 9.11 0.00 39.17 4.16
80 81 9.758651 GTAATACATGTGTGAATACATAGACCA 57.241 33.333 9.11 0.00 39.17 4.02
81 82 8.912658 CGTAATACATGTGTGAATACATAGACC 58.087 37.037 9.11 0.00 39.17 3.85
82 83 8.912658 CCGTAATACATGTGTGAATACATAGAC 58.087 37.037 9.11 0.00 39.17 2.59
83 84 8.635328 ACCGTAATACATGTGTGAATACATAGA 58.365 33.333 9.11 0.00 39.17 1.98
84 85 8.812147 ACCGTAATACATGTGTGAATACATAG 57.188 34.615 9.11 0.00 39.17 2.23
85 86 9.602568 AAACCGTAATACATGTGTGAATACATA 57.397 29.630 9.11 0.00 39.17 2.29
86 87 8.500753 AAACCGTAATACATGTGTGAATACAT 57.499 30.769 9.11 0.00 41.77 2.29
87 88 7.064847 GGAAACCGTAATACATGTGTGAATACA 59.935 37.037 9.11 0.00 34.63 2.29
88 89 7.064847 TGGAAACCGTAATACATGTGTGAATAC 59.935 37.037 9.11 0.76 0.00 1.89
89 90 7.104290 TGGAAACCGTAATACATGTGTGAATA 58.896 34.615 9.11 0.00 0.00 1.75
90 91 5.941058 TGGAAACCGTAATACATGTGTGAAT 59.059 36.000 9.11 0.00 0.00 2.57
91 92 5.306394 TGGAAACCGTAATACATGTGTGAA 58.694 37.500 9.11 0.00 0.00 3.18
92 93 4.895961 TGGAAACCGTAATACATGTGTGA 58.104 39.130 9.11 0.00 0.00 3.58
93 94 4.693566 ACTGGAAACCGTAATACATGTGTG 59.306 41.667 9.11 0.00 0.00 3.82
94 95 4.901868 ACTGGAAACCGTAATACATGTGT 58.098 39.130 9.11 0.00 0.00 3.72
95 96 5.873179 AACTGGAAACCGTAATACATGTG 57.127 39.130 9.11 0.00 0.00 3.21
96 97 9.101655 GTATTAACTGGAAACCGTAATACATGT 57.898 33.333 2.69 2.69 32.37 3.21
97 98 9.100554 TGTATTAACTGGAAACCGTAATACATG 57.899 33.333 17.47 0.00 35.38 3.21
98 99 9.669887 TTGTATTAACTGGAAACCGTAATACAT 57.330 29.630 19.66 0.00 38.15 2.29
99 100 9.669887 ATTGTATTAACTGGAAACCGTAATACA 57.330 29.630 17.47 17.47 37.23 2.29
105 106 8.833493 GCTATAATTGTATTAACTGGAAACCGT 58.167 33.333 0.00 0.00 0.00 4.83
106 107 8.832521 TGCTATAATTGTATTAACTGGAAACCG 58.167 33.333 0.00 0.00 0.00 4.44
129 130 9.346005 TCATGATAATTGTCTATTGTTCATGCT 57.654 29.630 18.84 0.00 41.74 3.79
130 131 9.955208 TTCATGATAATTGTCTATTGTTCATGC 57.045 29.630 18.84 0.00 41.74 4.06
172 173 9.533831 CCCTAGAGGCAATAATAAAATGGTTAT 57.466 33.333 0.00 0.00 0.00 1.89
173 174 8.934023 CCCTAGAGGCAATAATAAAATGGTTA 57.066 34.615 0.00 0.00 0.00 2.85
174 175 7.839680 CCCTAGAGGCAATAATAAAATGGTT 57.160 36.000 0.00 0.00 0.00 3.67
190 191 4.137543 GTGTTGGAAATATGCCCTAGAGG 58.862 47.826 0.00 0.00 39.47 3.69
191 192 4.137543 GGTGTTGGAAATATGCCCTAGAG 58.862 47.826 0.00 0.00 0.00 2.43
192 193 3.525609 TGGTGTTGGAAATATGCCCTAGA 59.474 43.478 0.00 0.00 0.00 2.43
193 194 3.885297 CTGGTGTTGGAAATATGCCCTAG 59.115 47.826 0.00 0.00 0.00 3.02
194 195 3.897239 CTGGTGTTGGAAATATGCCCTA 58.103 45.455 0.00 0.00 0.00 3.53
195 196 2.738743 CTGGTGTTGGAAATATGCCCT 58.261 47.619 0.00 0.00 0.00 5.19
196 197 1.136891 GCTGGTGTTGGAAATATGCCC 59.863 52.381 0.00 0.00 0.00 5.36
197 198 1.202290 CGCTGGTGTTGGAAATATGCC 60.202 52.381 0.00 0.00 0.00 4.40
198 199 1.742831 TCGCTGGTGTTGGAAATATGC 59.257 47.619 0.00 0.00 0.00 3.14
199 200 2.746904 TGTCGCTGGTGTTGGAAATATG 59.253 45.455 0.00 0.00 0.00 1.78
200 201 3.066291 TGTCGCTGGTGTTGGAAATAT 57.934 42.857 0.00 0.00 0.00 1.28
201 202 2.552599 TGTCGCTGGTGTTGGAAATA 57.447 45.000 0.00 0.00 0.00 1.40
202 203 1.812571 GATGTCGCTGGTGTTGGAAAT 59.187 47.619 0.00 0.00 0.00 2.17
203 204 1.234821 GATGTCGCTGGTGTTGGAAA 58.765 50.000 0.00 0.00 0.00 3.13
204 205 0.948623 CGATGTCGCTGGTGTTGGAA 60.949 55.000 0.00 0.00 0.00 3.53
205 206 1.374125 CGATGTCGCTGGTGTTGGA 60.374 57.895 0.00 0.00 0.00 3.53
206 207 1.626654 GACGATGTCGCTGGTGTTGG 61.627 60.000 1.77 0.00 44.43 3.77
207 208 1.781555 GACGATGTCGCTGGTGTTG 59.218 57.895 1.77 0.00 44.43 3.33
208 209 4.261888 GACGATGTCGCTGGTGTT 57.738 55.556 1.77 0.00 44.43 3.32
227 228 2.398588 TGTGTGAGAACTGAGAAGGGT 58.601 47.619 0.00 0.00 0.00 4.34
237 238 1.808945 CAAGGAGGCATGTGTGAGAAC 59.191 52.381 0.00 0.00 0.00 3.01
238 239 1.271543 CCAAGGAGGCATGTGTGAGAA 60.272 52.381 0.00 0.00 0.00 2.87
239 240 0.325933 CCAAGGAGGCATGTGTGAGA 59.674 55.000 0.00 0.00 0.00 3.27
240 241 0.037303 ACCAAGGAGGCATGTGTGAG 59.963 55.000 0.00 0.00 43.14 3.51
241 242 0.036732 GACCAAGGAGGCATGTGTGA 59.963 55.000 0.00 0.00 43.14 3.58
242 243 0.037303 AGACCAAGGAGGCATGTGTG 59.963 55.000 0.00 0.00 43.14 3.82
243 244 1.656587 TAGACCAAGGAGGCATGTGT 58.343 50.000 0.00 0.00 43.14 3.72
244 245 2.359900 GTTAGACCAAGGAGGCATGTG 58.640 52.381 0.00 0.00 43.14 3.21
245 246 1.282157 GGTTAGACCAAGGAGGCATGT 59.718 52.381 0.00 0.00 43.14 3.21
274 275 2.684001 TCACTATTGTAAGGTGGCCG 57.316 50.000 0.00 0.00 0.00 6.13
277 278 6.595716 CCTCTTCTTTCACTATTGTAAGGTGG 59.404 42.308 0.67 0.00 32.41 4.61
288 289 5.105997 GCCGTACTAACCTCTTCTTTCACTA 60.106 44.000 0.00 0.00 0.00 2.74
312 313 0.384725 CGTCCACTTTGCTTTCGCTG 60.385 55.000 0.00 0.00 36.97 5.18
321 323 1.004610 CTATCATGCGCGTCCACTTTG 60.005 52.381 8.43 0.00 0.00 2.77
323 325 0.175760 ACTATCATGCGCGTCCACTT 59.824 50.000 8.43 0.00 0.00 3.16
328 330 0.301687 CAACCACTATCATGCGCGTC 59.698 55.000 8.43 0.00 0.00 5.19
337 339 4.705337 ACTCTCGAAGACAACCACTATC 57.295 45.455 2.28 0.00 0.00 2.08
378 380 9.267084 ACAACAATATTTTTATGTGTGGAAACC 57.733 29.630 0.00 0.00 0.00 3.27
394 396 7.907389 TGAGGTCTTACTCTCACAACAATATT 58.093 34.615 0.00 0.00 38.32 1.28
406 408 3.312890 CATGGGGATGAGGTCTTACTCT 58.687 50.000 0.00 0.00 38.32 3.24
459 466 6.642707 TTTTCAATCGGACCATTAACAGTT 57.357 33.333 0.00 0.00 0.00 3.16
461 468 6.582295 CAGTTTTTCAATCGGACCATTAACAG 59.418 38.462 0.00 0.00 0.00 3.16
470 477 7.692908 TTGAATTTCAGTTTTTCAATCGGAC 57.307 32.000 0.00 0.00 35.16 4.79
492 499 4.361451 ACAAAGGCTCGCTAATGAATTG 57.639 40.909 0.00 0.00 0.00 2.32
498 505 3.270877 CCTACAACAAAGGCTCGCTAAT 58.729 45.455 0.00 0.00 0.00 1.73
502 509 1.923227 GCCCTACAACAAAGGCTCGC 61.923 60.000 0.00 0.00 42.34 5.03
508 515 4.074970 AGAGAATGTGCCCTACAACAAAG 58.925 43.478 0.00 0.00 43.77 2.77
519 526 2.606725 CGAAGTCATCAGAGAATGTGCC 59.393 50.000 0.00 0.00 0.00 5.01
547 554 2.489938 TTCCTCAAGAAATGACCCCG 57.510 50.000 0.00 0.00 33.47 5.73
556 563 4.881850 GGTTTCTGTGTCTTTCCTCAAGAA 59.118 41.667 0.00 0.00 43.52 2.52
573 580 7.231467 TCTGGTTTAGATAGCAAAAGGTTTCT 58.769 34.615 0.00 0.00 0.00 2.52
574 581 7.448748 TCTGGTTTAGATAGCAAAAGGTTTC 57.551 36.000 0.00 0.00 0.00 2.78
577 584 6.825721 CAGATCTGGTTTAGATAGCAAAAGGT 59.174 38.462 15.38 0.00 46.12 3.50
592 599 1.676916 CGGTGTGATGCAGATCTGGTT 60.677 52.381 23.89 0.00 0.00 3.67
596 603 1.520120 CGCGGTGTGATGCAGATCT 60.520 57.895 0.00 0.00 0.00 2.75
600 607 1.360931 TTGATCGCGGTGTGATGCAG 61.361 55.000 6.13 0.00 32.57 4.41
604 611 1.204704 TCTCTTTGATCGCGGTGTGAT 59.795 47.619 6.13 0.00 35.33 3.06
611 618 0.569810 CGAGCTTCTCTTTGATCGCG 59.430 55.000 0.00 0.00 35.42 5.87
622 629 2.584236 ACCGTCATATACCGAGCTTCT 58.416 47.619 0.00 0.00 0.00 2.85
639 646 3.242284 CCATAATTGACACACGCTAACCG 60.242 47.826 0.00 0.00 44.21 4.44
648 655 1.034838 GGCCCGCCATAATTGACACA 61.035 55.000 0.00 0.00 35.81 3.72
649 656 0.751643 AGGCCCGCCATAATTGACAC 60.752 55.000 8.74 0.00 38.92 3.67
653 660 1.909700 ATGTAGGCCCGCCATAATTG 58.090 50.000 8.74 0.00 38.92 2.32
655 662 2.158534 TGAAATGTAGGCCCGCCATAAT 60.159 45.455 8.74 0.00 38.92 1.28
656 663 1.213182 TGAAATGTAGGCCCGCCATAA 59.787 47.619 8.74 0.00 38.92 1.90
657 664 0.840617 TGAAATGTAGGCCCGCCATA 59.159 50.000 8.74 0.00 38.92 2.74
671 678 6.014156 AGACCAAGCTCTAGTGTACTTGAAAT 60.014 38.462 14.19 4.43 41.59 2.17
672 679 5.304614 AGACCAAGCTCTAGTGTACTTGAAA 59.695 40.000 14.19 0.00 41.59 2.69
689 696 1.734477 CGTCACAGCCGAGACCAAG 60.734 63.158 0.00 0.00 29.71 3.61
717 724 5.178252 AGTGAAACAGACATCGTTCTCATTG 59.822 40.000 0.00 0.00 41.43 2.82
722 729 3.555168 GGGAGTGAAACAGACATCGTTCT 60.555 47.826 0.00 0.00 41.43 3.01
728 735 2.304180 CAGAGGGGAGTGAAACAGACAT 59.696 50.000 0.00 0.00 41.43 3.06
729 736 1.694150 CAGAGGGGAGTGAAACAGACA 59.306 52.381 0.00 0.00 41.43 3.41
735 742 2.631384 TCCATTCAGAGGGGAGTGAAA 58.369 47.619 0.00 0.00 36.31 2.69
859 3987 3.953712 TTCGTCAAGGAGAGTGCAATA 57.046 42.857 0.00 0.00 0.00 1.90
1175 4315 0.328258 CCCTGGTTCCGGTGAAGAAT 59.672 55.000 0.00 0.00 0.00 2.40
1354 4506 7.122948 ACCTGAACCTCAAACTAGATACAGTAG 59.877 40.741 0.00 0.00 0.00 2.57
1422 4574 4.861389 TGTTCAAGCAAAGCAACAAATG 57.139 36.364 0.00 0.00 0.00 2.32
1423 4575 5.876612 TTTGTTCAAGCAAAGCAACAAAT 57.123 30.435 12.07 0.00 41.52 2.32
1424 4576 5.876612 ATTTGTTCAAGCAAAGCAACAAA 57.123 30.435 16.06 16.06 46.99 2.83
1425 4577 5.180868 ACAATTTGTTCAAGCAAAGCAACAA 59.819 32.000 0.00 3.07 41.00 2.83
1520 4673 4.641094 CCCCAATTTAGTTATGTACCGCAA 59.359 41.667 0.00 0.00 0.00 4.85
1557 4710 0.469705 ACAGCCATTCCCTGCACAAA 60.470 50.000 0.00 0.00 33.65 2.83
1627 4780 0.033405 CGTCTACAGAAGGAGGGGGA 60.033 60.000 0.00 0.00 0.00 4.81
1653 4806 4.141711 ACGCACAAACTATATCCAGGTGAT 60.142 41.667 0.00 0.00 37.49 3.06
1711 4864 3.306818 GACACGGTCACAAGTAGAGTTC 58.693 50.000 0.00 0.00 32.09 3.01
1747 4900 0.962356 CCTTCAGCGTCAAGGCCAAT 60.962 55.000 5.01 0.00 34.21 3.16
1760 4913 2.404215 TCTTTCTTTCGCGTCCTTCAG 58.596 47.619 5.77 0.00 0.00 3.02
1765 4918 3.806316 TCAAATCTTTCTTTCGCGTCC 57.194 42.857 5.77 0.00 0.00 4.79
1887 5041 0.679505 GTGTGTGCTGAGAGGGTACA 59.320 55.000 0.00 0.00 0.00 2.90
2014 5171 3.382227 TCAGCAGGATTGTGCAATTATGG 59.618 43.478 0.00 0.00 46.60 2.74
2062 5219 3.389329 CCATTGTCTAGCTAGTCCCACAT 59.611 47.826 20.10 9.09 0.00 3.21
2123 5280 7.383300 GGCTGAAAATATTCAAATATCACCAGC 59.617 37.037 20.54 20.54 44.64 4.85
2335 5492 2.638744 GCCAATGGCTAGGAGATGC 58.361 57.895 18.47 0.00 46.69 3.91
2514 6538 7.861630 AGCAAAATGTATACATAGGCTTAACG 58.138 34.615 22.90 8.96 35.21 3.18
2516 6540 7.713507 ACGAGCAAAATGTATACATAGGCTTAA 59.286 33.333 26.38 0.00 37.29 1.85
2521 6545 8.142994 AGAAACGAGCAAAATGTATACATAGG 57.857 34.615 18.56 11.79 35.10 2.57
2597 6623 8.150296 TGATCCTCATGTACCAAATAGTGTATG 58.850 37.037 0.00 0.00 0.00 2.39
2603 6629 8.859236 ATGATTGATCCTCATGTACCAAATAG 57.141 34.615 6.99 0.00 32.20 1.73
2680 6720 5.880332 GGTAAATGGAAGTCATGCACTTAGA 59.120 40.000 9.57 2.46 46.10 2.10
3023 7066 6.747739 TCGATCAAGAAGACTCTGTAAAATCG 59.252 38.462 0.00 0.00 30.03 3.34
3055 7098 7.881643 AACGAATATAGCAAACAAAAATGCA 57.118 28.000 0.00 0.00 44.95 3.96
3219 7262 0.104855 GCACGAGATCTGGCATACCA 59.895 55.000 0.00 0.00 46.51 3.25
3338 7489 6.456988 GCGCAGTAAGTTTATGCAGTAAGAAT 60.457 38.462 0.30 0.00 39.97 2.40
3474 7749 8.642908 AATTAACAAGGTGTTAGAAAGTTTGC 57.357 30.769 0.00 0.00 42.93 3.68
3504 7779 2.381752 AAACCAACCCTGCTAAGCTT 57.618 45.000 3.48 3.48 0.00 3.74
3548 7823 0.877649 AGCTCACTGTGCACTGTTCG 60.878 55.000 24.86 18.77 0.00 3.95
3554 7829 5.557136 CGCTATATTTTAGCTCACTGTGCAC 60.557 44.000 10.75 10.75 38.35 4.57
3670 7957 9.331282 GCAACATTCCAAGAGAAATAGTACTAT 57.669 33.333 9.71 9.71 38.21 2.12
3672 7959 7.168219 TGCAACATTCCAAGAGAAATAGTACT 58.832 34.615 0.00 0.00 38.21 2.73
3673 7960 7.377766 TGCAACATTCCAAGAGAAATAGTAC 57.622 36.000 0.00 0.00 38.21 2.73
3674 7961 9.851686 ATATGCAACATTCCAAGAGAAATAGTA 57.148 29.630 0.00 0.00 38.21 1.82
3678 7965 8.800332 GGATATATGCAACATTCCAAGAGAAAT 58.200 33.333 0.00 0.00 38.21 2.17
3679 7966 7.779326 TGGATATATGCAACATTCCAAGAGAAA 59.221 33.333 4.19 0.00 38.21 2.52
3680 7967 7.229306 GTGGATATATGCAACATTCCAAGAGAA 59.771 37.037 8.67 0.00 39.32 2.87
3682 7969 6.487668 TGTGGATATATGCAACATTCCAAGAG 59.512 38.462 8.67 0.00 35.19 2.85
3683 7970 6.363882 TGTGGATATATGCAACATTCCAAGA 58.636 36.000 8.67 2.21 35.19 3.02
3684 7971 6.638096 TGTGGATATATGCAACATTCCAAG 57.362 37.500 8.67 0.00 35.19 3.61
3685 7972 6.606796 ACTTGTGGATATATGCAACATTCCAA 59.393 34.615 8.67 6.95 35.19 3.53
3686 7973 6.039605 CACTTGTGGATATATGCAACATTCCA 59.960 38.462 8.67 7.49 0.00 3.53
3687 7974 6.039717 ACACTTGTGGATATATGCAACATTCC 59.960 38.462 8.67 0.00 0.00 3.01
3688 7975 7.031226 ACACTTGTGGATATATGCAACATTC 57.969 36.000 8.67 0.00 0.00 2.67
3689 7976 6.039717 GGACACTTGTGGATATATGCAACATT 59.960 38.462 8.67 0.00 0.00 2.71
3690 7977 5.532406 GGACACTTGTGGATATATGCAACAT 59.468 40.000 8.67 0.00 0.00 2.71
3691 7978 4.881273 GGACACTTGTGGATATATGCAACA 59.119 41.667 8.67 6.91 0.00 3.33
3692 7979 4.881273 TGGACACTTGTGGATATATGCAAC 59.119 41.667 8.67 4.47 0.00 4.17
3693 7980 5.109500 TGGACACTTGTGGATATATGCAA 57.891 39.130 8.67 1.80 0.00 4.08
3716 8003 5.945784 AGGTATGCAGCATTCTACAAGAAAA 59.054 36.000 14.58 0.00 37.82 2.29
3768 8057 5.531122 TTGCGCTCCTTGATATTAGTACT 57.469 39.130 9.73 0.00 0.00 2.73
3839 8128 1.611261 CCTTGGTCTCCACGGGGTA 60.611 63.158 2.12 0.00 39.01 3.69
3967 8256 9.802039 ATCCTAGTCTATCTCGTCTTTCTTAAT 57.198 33.333 0.00 0.00 0.00 1.40
3968 8257 9.629878 AATCCTAGTCTATCTCGTCTTTCTTAA 57.370 33.333 0.00 0.00 0.00 1.85
3969 8258 9.629878 AAATCCTAGTCTATCTCGTCTTTCTTA 57.370 33.333 0.00 0.00 0.00 2.10
3970 8259 8.410141 CAAATCCTAGTCTATCTCGTCTTTCTT 58.590 37.037 0.00 0.00 0.00 2.52
3971 8260 7.558444 ACAAATCCTAGTCTATCTCGTCTTTCT 59.442 37.037 0.00 0.00 0.00 2.52
3972 8261 7.708998 ACAAATCCTAGTCTATCTCGTCTTTC 58.291 38.462 0.00 0.00 0.00 2.62
3973 8262 7.648039 ACAAATCCTAGTCTATCTCGTCTTT 57.352 36.000 0.00 0.00 0.00 2.52
3974 8263 7.558444 AGAACAAATCCTAGTCTATCTCGTCTT 59.442 37.037 0.00 0.00 0.00 3.01
3975 8264 7.012894 CAGAACAAATCCTAGTCTATCTCGTCT 59.987 40.741 0.00 0.00 0.00 4.18
3976 8265 7.136119 CAGAACAAATCCTAGTCTATCTCGTC 58.864 42.308 0.00 0.00 0.00 4.20
3977 8266 6.039941 CCAGAACAAATCCTAGTCTATCTCGT 59.960 42.308 0.00 0.00 0.00 4.18
3978 8267 6.039941 ACCAGAACAAATCCTAGTCTATCTCG 59.960 42.308 0.00 0.00 0.00 4.04
3979 8268 7.354751 ACCAGAACAAATCCTAGTCTATCTC 57.645 40.000 0.00 0.00 0.00 2.75
3980 8269 7.741554 AACCAGAACAAATCCTAGTCTATCT 57.258 36.000 0.00 0.00 0.00 1.98
3981 8270 7.824779 ACAAACCAGAACAAATCCTAGTCTATC 59.175 37.037 0.00 0.00 0.00 2.08
3982 8271 7.690256 ACAAACCAGAACAAATCCTAGTCTAT 58.310 34.615 0.00 0.00 0.00 1.98
3983 8272 7.016268 AGACAAACCAGAACAAATCCTAGTCTA 59.984 37.037 0.00 0.00 0.00 2.59
3984 8273 5.941788 ACAAACCAGAACAAATCCTAGTCT 58.058 37.500 0.00 0.00 0.00 3.24
3985 8274 5.998363 AGACAAACCAGAACAAATCCTAGTC 59.002 40.000 0.00 0.00 0.00 2.59
3986 8275 5.941788 AGACAAACCAGAACAAATCCTAGT 58.058 37.500 0.00 0.00 0.00 2.57
3987 8276 6.263168 ACAAGACAAACCAGAACAAATCCTAG 59.737 38.462 0.00 0.00 0.00 3.02
3988 8277 6.126409 ACAAGACAAACCAGAACAAATCCTA 58.874 36.000 0.00 0.00 0.00 2.94
3989 8278 4.956075 ACAAGACAAACCAGAACAAATCCT 59.044 37.500 0.00 0.00 0.00 3.24
3990 8279 5.262588 ACAAGACAAACCAGAACAAATCC 57.737 39.130 0.00 0.00 0.00 3.01
3991 8280 7.027778 AGTACAAGACAAACCAGAACAAATC 57.972 36.000 0.00 0.00 0.00 2.17
3992 8281 6.039382 GGAGTACAAGACAAACCAGAACAAAT 59.961 38.462 0.00 0.00 0.00 2.32
3993 8282 5.355910 GGAGTACAAGACAAACCAGAACAAA 59.644 40.000 0.00 0.00 0.00 2.83
3994 8283 4.879545 GGAGTACAAGACAAACCAGAACAA 59.120 41.667 0.00 0.00 0.00 2.83
3995 8284 4.080807 TGGAGTACAAGACAAACCAGAACA 60.081 41.667 0.00 0.00 0.00 3.18
3996 8285 4.448210 TGGAGTACAAGACAAACCAGAAC 58.552 43.478 0.00 0.00 0.00 3.01
3997 8286 4.764050 TGGAGTACAAGACAAACCAGAA 57.236 40.909 0.00 0.00 0.00 3.02
3998 8287 4.764050 TTGGAGTACAAGACAAACCAGA 57.236 40.909 0.00 0.00 33.18 3.86
3999 8288 6.208644 CAATTTGGAGTACAAGACAAACCAG 58.791 40.000 0.00 0.00 40.82 4.00
4000 8289 5.068460 CCAATTTGGAGTACAAGACAAACCA 59.932 40.000 10.03 0.00 40.96 3.67
4001 8290 5.068591 ACCAATTTGGAGTACAAGACAAACC 59.931 40.000 22.19 0.00 40.96 3.27
4002 8291 6.144078 ACCAATTTGGAGTACAAGACAAAC 57.856 37.500 22.19 0.00 40.96 2.93
4003 8292 5.888724 TGACCAATTTGGAGTACAAGACAAA 59.111 36.000 22.19 1.39 40.96 2.83
4004 8293 5.441500 TGACCAATTTGGAGTACAAGACAA 58.558 37.500 22.19 0.00 40.96 3.18
4005 8294 5.042463 TGACCAATTTGGAGTACAAGACA 57.958 39.130 22.19 5.12 40.96 3.41
4006 8295 6.016276 ACAATGACCAATTTGGAGTACAAGAC 60.016 38.462 22.19 2.94 40.96 3.01
4007 8296 6.068010 ACAATGACCAATTTGGAGTACAAGA 58.932 36.000 22.19 0.00 40.96 3.02
4008 8297 6.331369 ACAATGACCAATTTGGAGTACAAG 57.669 37.500 22.19 13.39 40.96 3.16
4009 8298 7.001674 AGTACAATGACCAATTTGGAGTACAA 58.998 34.615 22.19 1.38 40.96 2.41
4010 8299 6.539173 AGTACAATGACCAATTTGGAGTACA 58.461 36.000 22.19 14.78 40.96 2.90
4011 8300 7.390718 AGAAGTACAATGACCAATTTGGAGTAC 59.609 37.037 22.19 20.48 40.96 2.73
4012 8301 7.458397 AGAAGTACAATGACCAATTTGGAGTA 58.542 34.615 22.19 12.18 40.96 2.59
4013 8302 6.306987 AGAAGTACAATGACCAATTTGGAGT 58.693 36.000 22.19 13.03 40.96 3.85
4014 8303 6.824305 AGAAGTACAATGACCAATTTGGAG 57.176 37.500 22.19 8.36 40.96 3.86
4023 8312 9.765795 GGGCATATATATAGAAGTACAATGACC 57.234 37.037 0.00 0.00 33.14 4.02
4029 8318 9.147732 CCTCATGGGCATATATATAGAAGTACA 57.852 37.037 0.00 0.00 0.00 2.90
4047 8336 1.952296 GTATTGCTTGAGCCTCATGGG 59.048 52.381 9.39 0.00 41.18 4.00
4048 8337 2.646930 TGTATTGCTTGAGCCTCATGG 58.353 47.619 9.39 0.96 41.18 3.66
4049 8338 3.486375 CGTTGTATTGCTTGAGCCTCATG 60.486 47.826 0.00 0.00 41.18 3.07
4050 8339 2.679837 CGTTGTATTGCTTGAGCCTCAT 59.320 45.455 0.00 0.00 41.18 2.90
4051 8340 2.076100 CGTTGTATTGCTTGAGCCTCA 58.924 47.619 0.00 0.00 41.18 3.86
4052 8341 2.346803 TCGTTGTATTGCTTGAGCCTC 58.653 47.619 0.00 0.00 41.18 4.70
4053 8342 2.472695 TCGTTGTATTGCTTGAGCCT 57.527 45.000 0.00 0.00 41.18 4.58
4054 8343 2.484264 AGTTCGTTGTATTGCTTGAGCC 59.516 45.455 0.00 0.00 41.18 4.70
4055 8344 3.813529 AGTTCGTTGTATTGCTTGAGC 57.186 42.857 0.00 0.00 42.50 4.26
4056 8345 7.478667 GTGAAATAGTTCGTTGTATTGCTTGAG 59.521 37.037 0.00 0.00 36.46 3.02
4057 8346 7.295201 GTGAAATAGTTCGTTGTATTGCTTGA 58.705 34.615 0.00 0.00 36.46 3.02
4058 8347 6.523201 GGTGAAATAGTTCGTTGTATTGCTTG 59.477 38.462 0.00 0.00 36.46 4.01
4059 8348 6.205853 TGGTGAAATAGTTCGTTGTATTGCTT 59.794 34.615 0.00 0.00 36.46 3.91
4060 8349 5.703592 TGGTGAAATAGTTCGTTGTATTGCT 59.296 36.000 0.00 0.00 36.46 3.91
4061 8350 5.933790 TGGTGAAATAGTTCGTTGTATTGC 58.066 37.500 0.00 0.00 36.46 3.56
4062 8351 8.233868 TGATTGGTGAAATAGTTCGTTGTATTG 58.766 33.333 0.00 0.00 36.46 1.90
4063 8352 8.330466 TGATTGGTGAAATAGTTCGTTGTATT 57.670 30.769 0.00 0.00 36.46 1.89
4064 8353 7.915293 TGATTGGTGAAATAGTTCGTTGTAT 57.085 32.000 0.00 0.00 36.46 2.29
4065 8354 7.604545 TGATGATTGGTGAAATAGTTCGTTGTA 59.395 33.333 0.00 0.00 36.46 2.41
4066 8355 6.429692 TGATGATTGGTGAAATAGTTCGTTGT 59.570 34.615 0.00 0.00 36.46 3.32
4067 8356 6.742718 GTGATGATTGGTGAAATAGTTCGTTG 59.257 38.462 0.00 0.00 36.46 4.10
4068 8357 6.655003 AGTGATGATTGGTGAAATAGTTCGTT 59.345 34.615 0.00 0.00 36.46 3.85
4069 8358 6.173339 AGTGATGATTGGTGAAATAGTTCGT 58.827 36.000 0.00 0.00 36.46 3.85
4070 8359 6.536582 AGAGTGATGATTGGTGAAATAGTTCG 59.463 38.462 0.00 0.00 36.46 3.95
4071 8360 7.011857 GGAGAGTGATGATTGGTGAAATAGTTC 59.988 40.741 0.00 0.00 0.00 3.01
4072 8361 6.825721 GGAGAGTGATGATTGGTGAAATAGTT 59.174 38.462 0.00 0.00 0.00 2.24
4073 8362 6.352516 GGAGAGTGATGATTGGTGAAATAGT 58.647 40.000 0.00 0.00 0.00 2.12
4074 8363 5.762218 GGGAGAGTGATGATTGGTGAAATAG 59.238 44.000 0.00 0.00 0.00 1.73
4075 8364 5.429762 AGGGAGAGTGATGATTGGTGAAATA 59.570 40.000 0.00 0.00 0.00 1.40
4076 8365 4.229123 AGGGAGAGTGATGATTGGTGAAAT 59.771 41.667 0.00 0.00 0.00 2.17
4077 8366 3.588842 AGGGAGAGTGATGATTGGTGAAA 59.411 43.478 0.00 0.00 0.00 2.69
4078 8367 3.184628 AGGGAGAGTGATGATTGGTGAA 58.815 45.455 0.00 0.00 0.00 3.18
4079 8368 2.837947 AGGGAGAGTGATGATTGGTGA 58.162 47.619 0.00 0.00 0.00 4.02
4080 8369 3.539604 GAAGGGAGAGTGATGATTGGTG 58.460 50.000 0.00 0.00 0.00 4.17
4081 8370 2.169352 CGAAGGGAGAGTGATGATTGGT 59.831 50.000 0.00 0.00 0.00 3.67
4082 8371 2.432146 TCGAAGGGAGAGTGATGATTGG 59.568 50.000 0.00 0.00 0.00 3.16
4083 8372 3.808466 TCGAAGGGAGAGTGATGATTG 57.192 47.619 0.00 0.00 0.00 2.67
4084 8373 3.515502 TGTTCGAAGGGAGAGTGATGATT 59.484 43.478 0.00 0.00 0.00 2.57
4085 8374 3.099905 TGTTCGAAGGGAGAGTGATGAT 58.900 45.455 0.00 0.00 0.00 2.45
4086 8375 2.525368 TGTTCGAAGGGAGAGTGATGA 58.475 47.619 0.00 0.00 0.00 2.92
4087 8376 3.193263 CATGTTCGAAGGGAGAGTGATG 58.807 50.000 0.00 0.00 0.00 3.07
4088 8377 2.169352 CCATGTTCGAAGGGAGAGTGAT 59.831 50.000 0.00 0.00 0.00 3.06
4089 8378 1.550524 CCATGTTCGAAGGGAGAGTGA 59.449 52.381 0.00 0.00 0.00 3.41
4090 8379 1.276421 ACCATGTTCGAAGGGAGAGTG 59.724 52.381 15.24 0.88 0.00 3.51
4091 8380 1.645710 ACCATGTTCGAAGGGAGAGT 58.354 50.000 15.24 0.00 0.00 3.24
4092 8381 3.384789 TGATACCATGTTCGAAGGGAGAG 59.615 47.826 15.24 0.00 0.00 3.20
4093 8382 3.371034 TGATACCATGTTCGAAGGGAGA 58.629 45.455 15.24 5.29 0.00 3.71
4094 8383 3.722147 CTGATACCATGTTCGAAGGGAG 58.278 50.000 15.24 1.30 0.00 4.30
4095 8384 2.158957 GCTGATACCATGTTCGAAGGGA 60.159 50.000 15.24 3.56 0.00 4.20
4096 8385 2.158900 AGCTGATACCATGTTCGAAGGG 60.159 50.000 0.00 3.27 0.00 3.95
4097 8386 3.185246 AGCTGATACCATGTTCGAAGG 57.815 47.619 0.00 0.00 0.00 3.46
4098 8387 5.006746 GGTTAAGCTGATACCATGTTCGAAG 59.993 44.000 0.00 0.00 32.12 3.79
4099 8388 4.873827 GGTTAAGCTGATACCATGTTCGAA 59.126 41.667 0.00 0.00 32.12 3.71
4100 8389 4.439057 GGTTAAGCTGATACCATGTTCGA 58.561 43.478 7.16 0.00 32.12 3.71
4101 8390 3.245284 CGGTTAAGCTGATACCATGTTCG 59.755 47.826 11.41 0.00 32.12 3.95
4102 8391 4.439057 TCGGTTAAGCTGATACCATGTTC 58.561 43.478 11.41 0.00 32.12 3.18
4103 8392 4.481368 TCGGTTAAGCTGATACCATGTT 57.519 40.909 11.41 0.00 32.12 2.71
4104 8393 4.689612 ATCGGTTAAGCTGATACCATGT 57.310 40.909 11.41 0.00 41.20 3.21
4105 8394 5.056480 TGAATCGGTTAAGCTGATACCATG 58.944 41.667 11.41 0.00 42.11 3.66
4106 8395 5.290493 TGAATCGGTTAAGCTGATACCAT 57.710 39.130 11.41 3.44 42.11 3.55
4107 8396 4.746535 TGAATCGGTTAAGCTGATACCA 57.253 40.909 11.41 6.71 42.11 3.25
4108 8397 4.272748 GGTTGAATCGGTTAAGCTGATACC 59.727 45.833 2.76 8.13 42.11 2.73
4109 8398 4.272748 GGGTTGAATCGGTTAAGCTGATAC 59.727 45.833 2.76 3.59 42.11 2.24
4110 8399 4.163458 AGGGTTGAATCGGTTAAGCTGATA 59.837 41.667 2.76 0.00 42.11 2.15
4111 8400 3.054361 AGGGTTGAATCGGTTAAGCTGAT 60.054 43.478 2.76 4.86 44.70 2.90
4112 8401 2.304761 AGGGTTGAATCGGTTAAGCTGA 59.695 45.455 2.76 2.66 36.82 4.26
4113 8402 2.711542 AGGGTTGAATCGGTTAAGCTG 58.288 47.619 2.76 0.00 0.00 4.24
4114 8403 3.681874 GCTAGGGTTGAATCGGTTAAGCT 60.682 47.826 2.76 0.00 0.00 3.74
4115 8404 2.612672 GCTAGGGTTGAATCGGTTAAGC 59.387 50.000 0.00 0.00 0.00 3.09
4116 8405 3.203716 GGCTAGGGTTGAATCGGTTAAG 58.796 50.000 0.00 0.00 0.00 1.85
4117 8406 2.419021 CGGCTAGGGTTGAATCGGTTAA 60.419 50.000 0.00 0.00 0.00 2.01
4118 8407 1.137479 CGGCTAGGGTTGAATCGGTTA 59.863 52.381 0.00 0.00 0.00 2.85
4119 8408 0.107848 CGGCTAGGGTTGAATCGGTT 60.108 55.000 0.00 0.00 0.00 4.44
4120 8409 1.520666 CGGCTAGGGTTGAATCGGT 59.479 57.895 0.00 0.00 0.00 4.69
4121 8410 1.887707 GCGGCTAGGGTTGAATCGG 60.888 63.158 0.00 0.00 0.00 4.18
4122 8411 1.144057 AGCGGCTAGGGTTGAATCG 59.856 57.895 0.00 0.00 0.00 3.34
4123 8412 1.440145 GCAGCGGCTAGGGTTGAATC 61.440 60.000 0.26 0.00 36.96 2.52
4124 8413 1.452108 GCAGCGGCTAGGGTTGAAT 60.452 57.895 0.26 0.00 36.96 2.57
4125 8414 2.046314 GCAGCGGCTAGGGTTGAA 60.046 61.111 0.26 0.00 36.96 2.69
4126 8415 4.096003 GGCAGCGGCTAGGGTTGA 62.096 66.667 9.17 0.00 40.87 3.18
4142 8431 4.796231 CGGAGTGGAAGCGACGGG 62.796 72.222 0.00 0.00 0.00 5.28
4143 8432 4.052229 ACGGAGTGGAAGCGACGG 62.052 66.667 0.00 0.00 42.51 4.79
4176 8465 4.530857 GGTCATGGAGGCCGACCG 62.531 72.222 10.54 1.66 39.86 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.