Multiple sequence alignment - TraesCS4D01G057500
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS4D01G057500 | chr4D | 100.000 | 8421 | 0 | 0 | 1 | 8421 | 32487810 | 32496230 | 0.000000e+00 | 15551.0 |
1 | TraesCS4D01G057500 | chr4D | 83.117 | 77 | 12 | 1 | 4913 | 4988 | 436910402 | 436910326 | 1.520000e-07 | 69.4 |
2 | TraesCS4D01G057500 | chr4B | 94.246 | 6691 | 252 | 45 | 1 | 6654 | 47441418 | 47448012 | 0.000000e+00 | 10100.0 |
3 | TraesCS4D01G057500 | chr4B | 94.235 | 503 | 19 | 4 | 6811 | 7305 | 47448338 | 47448838 | 0.000000e+00 | 760.0 |
4 | TraesCS4D01G057500 | chr4B | 81.319 | 546 | 81 | 18 | 7785 | 8317 | 47494221 | 47494758 | 2.810000e-114 | 424.0 |
5 | TraesCS4D01G057500 | chr4B | 95.541 | 157 | 7 | 0 | 6653 | 6809 | 47448094 | 47448250 | 1.400000e-62 | 252.0 |
6 | TraesCS4D01G057500 | chr4B | 92.188 | 128 | 8 | 1 | 7407 | 7534 | 47449293 | 47449418 | 6.720000e-41 | 180.0 |
7 | TraesCS4D01G057500 | chr4B | 85.714 | 84 | 11 | 1 | 8303 | 8386 | 47495658 | 47495740 | 4.190000e-13 | 87.9 |
8 | TraesCS4D01G057500 | chr4A | 95.728 | 6273 | 212 | 24 | 1134 | 7387 | 569892379 | 569886144 | 0.000000e+00 | 10048.0 |
9 | TraesCS4D01G057500 | chr4A | 88.338 | 746 | 73 | 10 | 1 | 746 | 569946605 | 569945874 | 0.000000e+00 | 883.0 |
10 | TraesCS4D01G057500 | chr4A | 85.759 | 316 | 26 | 9 | 742 | 1041 | 569892899 | 569892587 | 4.910000e-82 | 316.0 |
11 | TraesCS4D01G057500 | chr4A | 88.235 | 272 | 21 | 7 | 7388 | 7657 | 569886088 | 569885826 | 1.760000e-81 | 315.0 |
12 | TraesCS4D01G057500 | chr4A | 84.049 | 326 | 38 | 4 | 8096 | 8421 | 569885091 | 569884780 | 1.370000e-77 | 302.0 |
13 | TraesCS4D01G057500 | chr5A | 85.970 | 335 | 41 | 6 | 2512 | 2843 | 703428550 | 703428219 | 3.740000e-93 | 353.0 |
14 | TraesCS4D01G057500 | chr5A | 84.375 | 96 | 14 | 1 | 4913 | 5007 | 688050669 | 688050764 | 9.000000e-15 | 93.5 |
15 | TraesCS4D01G057500 | chr5A | 97.727 | 44 | 1 | 0 | 4913 | 4956 | 482123050 | 482123007 | 9.060000e-10 | 76.8 |
16 | TraesCS4D01G057500 | chrUn | 86.833 | 281 | 19 | 9 | 4087 | 4361 | 479111990 | 479111722 | 1.780000e-76 | 298.0 |
17 | TraesCS4D01G057500 | chr7B | 86.833 | 281 | 19 | 9 | 4087 | 4361 | 472333738 | 472334006 | 1.780000e-76 | 298.0 |
18 | TraesCS4D01G057500 | chr7B | 86.833 | 281 | 19 | 9 | 4087 | 4361 | 472399221 | 472399489 | 1.780000e-76 | 298.0 |
19 | TraesCS4D01G057500 | chr7B | 72.237 | 389 | 75 | 19 | 4 | 376 | 12419749 | 12419378 | 1.160000e-13 | 89.8 |
20 | TraesCS4D01G057500 | chr5B | 85.512 | 283 | 38 | 3 | 2720 | 3002 | 681106555 | 681106834 | 8.270000e-75 | 292.0 |
21 | TraesCS4D01G057500 | chr5B | 97.561 | 41 | 1 | 0 | 4913 | 4953 | 75218473 | 75218433 | 4.220000e-08 | 71.3 |
22 | TraesCS4D01G057500 | chr3B | 85.563 | 284 | 22 | 5 | 4087 | 4361 | 104376978 | 104377251 | 6.440000e-71 | 279.0 |
23 | TraesCS4D01G057500 | chr3B | 85.321 | 109 | 14 | 2 | 1283 | 1390 | 293739204 | 293739311 | 2.480000e-20 | 111.0 |
24 | TraesCS4D01G057500 | chr5D | 85.211 | 284 | 23 | 5 | 4087 | 4361 | 18186134 | 18185861 | 2.990000e-69 | 274.0 |
25 | TraesCS4D01G057500 | chr1B | 85.547 | 256 | 33 | 2 | 2512 | 2764 | 119894714 | 119894460 | 1.800000e-66 | 265.0 |
26 | TraesCS4D01G057500 | chr1B | 84.507 | 284 | 25 | 5 | 4087 | 4361 | 637601746 | 637601473 | 6.480000e-66 | 263.0 |
27 | TraesCS4D01G057500 | chr2D | 85.650 | 223 | 14 | 8 | 4089 | 4305 | 458168522 | 458168312 | 1.420000e-52 | 219.0 |
28 | TraesCS4D01G057500 | chr2D | 83.000 | 100 | 14 | 3 | 4911 | 5009 | 426864531 | 426864628 | 4.190000e-13 | 87.9 |
29 | TraesCS4D01G057500 | chr3D | 85.321 | 109 | 14 | 2 | 1283 | 1390 | 219560887 | 219560994 | 2.480000e-20 | 111.0 |
30 | TraesCS4D01G057500 | chr3D | 95.652 | 46 | 2 | 0 | 4955 | 5000 | 107681075 | 107681120 | 3.260000e-09 | 75.0 |
31 | TraesCS4D01G057500 | chr2A | 88.235 | 85 | 6 | 2 | 4913 | 4997 | 555338596 | 555338516 | 1.930000e-16 | 99.0 |
32 | TraesCS4D01G057500 | chr2B | 85.714 | 91 | 13 | 0 | 4918 | 5008 | 799261534 | 799261444 | 6.960000e-16 | 97.1 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS4D01G057500 | chr4D | 32487810 | 32496230 | 8420 | False | 15551.00 | 15551 | 100.00000 | 1 | 8421 | 1 | chr4D.!!$F1 | 8420 |
1 | TraesCS4D01G057500 | chr4B | 47441418 | 47449418 | 8000 | False | 2823.00 | 10100 | 94.05250 | 1 | 7534 | 4 | chr4B.!!$F1 | 7533 |
2 | TraesCS4D01G057500 | chr4B | 47494221 | 47495740 | 1519 | False | 255.95 | 424 | 83.51650 | 7785 | 8386 | 2 | chr4B.!!$F2 | 601 |
3 | TraesCS4D01G057500 | chr4A | 569884780 | 569892899 | 8119 | True | 2745.25 | 10048 | 88.44275 | 742 | 8421 | 4 | chr4A.!!$R2 | 7679 |
4 | TraesCS4D01G057500 | chr4A | 569945874 | 569946605 | 731 | True | 883.00 | 883 | 88.33800 | 1 | 746 | 1 | chr4A.!!$R1 | 745 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
359 | 363 | 0.542938 | CTCGGGATCATGAGGGGCTA | 60.543 | 60.000 | 0.09 | 0.0 | 0.00 | 3.93 | F |
1069 | 1108 | 0.249398 | TCTAAAGTTCTGCGCTCCCC | 59.751 | 55.000 | 9.73 | 0.0 | 0.00 | 4.81 | F |
1070 | 1109 | 0.744771 | CTAAAGTTCTGCGCTCCCCC | 60.745 | 60.000 | 9.73 | 0.0 | 0.00 | 5.40 | F |
2504 | 2660 | 0.815734 | CCCTGTACGTGACCGATTCT | 59.184 | 55.000 | 0.00 | 0.0 | 37.88 | 2.40 | F |
3388 | 3545 | 1.190833 | CCAGCCTCTGTGTCTCCTGT | 61.191 | 60.000 | 0.00 | 0.0 | 0.00 | 4.00 | F |
4067 | 4227 | 1.136305 | TCGCGCTGCTCTTATACCTTT | 59.864 | 47.619 | 5.56 | 0.0 | 0.00 | 3.11 | F |
4481 | 4649 | 0.892755 | TTACAGTGCAGTACCCCGAG | 59.107 | 55.000 | 0.00 | 0.0 | 0.00 | 4.63 | F |
6155 | 6353 | 1.236628 | CATGCTATTCAGGAGGCAGC | 58.763 | 55.000 | 0.00 | 0.0 | 38.11 | 5.25 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1442 | 1596 | 0.446222 | CGAAACTGCCGGTTACATGG | 59.554 | 55.000 | 1.90 | 0.00 | 37.12 | 3.66 | R |
2362 | 2518 | 0.889186 | GTTCAACACCCTGTGGCGAT | 60.889 | 55.000 | 0.00 | 0.00 | 37.94 | 4.58 | R |
2914 | 3071 | 1.411041 | AGCCCATTCGGTCCTAGTAC | 58.589 | 55.000 | 0.00 | 0.00 | 0.00 | 2.73 | R |
3530 | 3687 | 0.871722 | GCAAATTTTGGAAACGCCCC | 59.128 | 50.000 | 10.96 | 0.00 | 34.97 | 5.80 | R |
4394 | 4562 | 1.789078 | CTTATGGCGGGTGCAGCATC | 61.789 | 60.000 | 19.06 | 8.14 | 45.35 | 3.91 | R |
5505 | 5691 | 2.637382 | TCAACTAGTTGCTGGACATGGA | 59.363 | 45.455 | 27.49 | 6.49 | 40.24 | 3.41 | R |
6460 | 6659 | 2.373169 | AGGAAGCATGACCTGTTGAAGA | 59.627 | 45.455 | 0.00 | 0.00 | 34.99 | 2.87 | R |
7670 | 8841 | 0.175989 | AAATCTCTCGGAAGACGGGC | 59.824 | 55.000 | 0.00 | 0.00 | 44.66 | 6.13 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
52 | 53 | 4.786425 | ACTAATCCAGATCTTCCAAAGCC | 58.214 | 43.478 | 0.00 | 0.00 | 0.00 | 4.35 |
57 | 60 | 2.421248 | CCAGATCTTCCAAAGCCTCCTC | 60.421 | 54.545 | 0.00 | 0.00 | 0.00 | 3.71 |
58 | 61 | 2.504996 | CAGATCTTCCAAAGCCTCCTCT | 59.495 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
59 | 62 | 3.708631 | CAGATCTTCCAAAGCCTCCTCTA | 59.291 | 47.826 | 0.00 | 0.00 | 0.00 | 2.43 |
60 | 63 | 3.709141 | AGATCTTCCAAAGCCTCCTCTAC | 59.291 | 47.826 | 0.00 | 0.00 | 0.00 | 2.59 |
61 | 64 | 2.188817 | TCTTCCAAAGCCTCCTCTACC | 58.811 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
62 | 65 | 2.192263 | CTTCCAAAGCCTCCTCTACCT | 58.808 | 52.381 | 0.00 | 0.00 | 0.00 | 3.08 |
139 | 142 | 2.491693 | CGTTTACGAGTGGTTACCCCTA | 59.508 | 50.000 | 0.00 | 0.00 | 43.02 | 3.53 |
142 | 145 | 0.828677 | ACGAGTGGTTACCCCTATGC | 59.171 | 55.000 | 0.00 | 0.00 | 0.00 | 3.14 |
143 | 146 | 0.828022 | CGAGTGGTTACCCCTATGCA | 59.172 | 55.000 | 0.00 | 0.00 | 0.00 | 3.96 |
150 | 153 | 3.203263 | TGGTTACCCCTATGCAAATGCTA | 59.797 | 43.478 | 6.97 | 0.00 | 42.66 | 3.49 |
155 | 158 | 3.233507 | CCCCTATGCAAATGCTACCAAT | 58.766 | 45.455 | 6.97 | 0.00 | 42.66 | 3.16 |
165 | 168 | 5.712004 | CAAATGCTACCAATGATGTTGTCA | 58.288 | 37.500 | 0.00 | 0.00 | 42.06 | 3.58 |
238 | 241 | 3.562505 | GCAAGTGCTTCATTCTTCAGTG | 58.437 | 45.455 | 0.00 | 0.00 | 38.21 | 3.66 |
239 | 242 | 3.004106 | GCAAGTGCTTCATTCTTCAGTGT | 59.996 | 43.478 | 0.00 | 0.00 | 38.21 | 3.55 |
240 | 243 | 4.534168 | CAAGTGCTTCATTCTTCAGTGTG | 58.466 | 43.478 | 0.00 | 0.00 | 0.00 | 3.82 |
241 | 244 | 4.077300 | AGTGCTTCATTCTTCAGTGTGA | 57.923 | 40.909 | 0.00 | 0.00 | 0.00 | 3.58 |
250 | 253 | 2.135139 | TCTTCAGTGTGATGTGAACGC | 58.865 | 47.619 | 0.00 | 0.00 | 0.00 | 4.84 |
266 | 269 | 2.721231 | GCTGTGGCGTTGCTTGAA | 59.279 | 55.556 | 0.00 | 0.00 | 0.00 | 2.69 |
284 | 287 | 5.613577 | GCTTGAACTTGATCTTGAGAACGAC | 60.614 | 44.000 | 0.00 | 0.00 | 0.00 | 4.34 |
285 | 288 | 4.307432 | TGAACTTGATCTTGAGAACGACC | 58.693 | 43.478 | 0.00 | 0.00 | 0.00 | 4.79 |
286 | 289 | 4.039245 | TGAACTTGATCTTGAGAACGACCT | 59.961 | 41.667 | 0.00 | 0.00 | 0.00 | 3.85 |
287 | 290 | 4.608948 | ACTTGATCTTGAGAACGACCTT | 57.391 | 40.909 | 0.00 | 0.00 | 0.00 | 3.50 |
295 | 298 | 2.434359 | GAACGACCTTGGGCCTCG | 60.434 | 66.667 | 10.94 | 10.94 | 0.00 | 4.63 |
304 | 307 | 1.407437 | CCTTGGGCCTCGATATATGGC | 60.407 | 57.143 | 4.53 | 4.10 | 45.42 | 4.40 |
344 | 348 | 2.289002 | GCTTGCCATTGATCTTACTCGG | 59.711 | 50.000 | 0.00 | 0.00 | 0.00 | 4.63 |
359 | 363 | 0.542938 | CTCGGGATCATGAGGGGCTA | 60.543 | 60.000 | 0.09 | 0.00 | 0.00 | 3.93 |
411 | 415 | 1.730593 | CGTACGCGGCTCGAGAAAAG | 61.731 | 60.000 | 18.75 | 6.73 | 41.67 | 2.27 |
430 | 434 | 6.876257 | AGAAAAGTGACTTGGATCAGTGATAC | 59.124 | 38.462 | 8.55 | 8.55 | 32.42 | 2.24 |
461 | 465 | 2.500646 | GGCAATGGGGCGAATTGG | 59.499 | 61.111 | 11.33 | 0.00 | 35.88 | 3.16 |
498 | 502 | 1.076632 | ACCGACCAAGCCAAACCAA | 60.077 | 52.632 | 0.00 | 0.00 | 0.00 | 3.67 |
504 | 508 | 2.298729 | GACCAAGCCAAACCAAATGCTA | 59.701 | 45.455 | 0.00 | 0.00 | 32.82 | 3.49 |
519 | 523 | 8.310122 | ACCAAATGCTAAAAATCTCACCATAT | 57.690 | 30.769 | 0.00 | 0.00 | 0.00 | 1.78 |
548 | 552 | 2.840651 | TCCCACCACAAAAACAATTGGT | 59.159 | 40.909 | 10.83 | 0.00 | 43.39 | 3.67 |
601 | 605 | 7.731882 | AGAAAGCTTAGTGAAGTTAAAGGAC | 57.268 | 36.000 | 0.00 | 0.00 | 34.90 | 3.85 |
703 | 707 | 8.765219 | ACTATTGATGCTTACTAACTAAATGCG | 58.235 | 33.333 | 0.00 | 0.00 | 0.00 | 4.73 |
704 | 708 | 5.403897 | TGATGCTTACTAACTAAATGCGC | 57.596 | 39.130 | 0.00 | 0.00 | 0.00 | 6.09 |
803 | 810 | 4.336280 | GACTTTAAGTGGGGATTGAAGCT | 58.664 | 43.478 | 0.93 | 0.00 | 29.01 | 3.74 |
965 | 1004 | 1.613610 | CCTCGTCCCCTCCTACTCA | 59.386 | 63.158 | 0.00 | 0.00 | 0.00 | 3.41 |
1054 | 1093 | 1.219124 | CGCTTCCTGCTGCCTCTAA | 59.781 | 57.895 | 0.00 | 0.00 | 40.11 | 2.10 |
1065 | 1104 | 0.321671 | TGCCTCTAAAGTTCTGCGCT | 59.678 | 50.000 | 9.73 | 0.00 | 0.00 | 5.92 |
1069 | 1108 | 0.249398 | TCTAAAGTTCTGCGCTCCCC | 59.751 | 55.000 | 9.73 | 0.00 | 0.00 | 4.81 |
1070 | 1109 | 0.744771 | CTAAAGTTCTGCGCTCCCCC | 60.745 | 60.000 | 9.73 | 0.00 | 0.00 | 5.40 |
1143 | 1297 | 4.486503 | CTGCCCCTCTGCCTCTGC | 62.487 | 72.222 | 0.00 | 0.00 | 38.26 | 4.26 |
1173 | 1327 | 2.989824 | CCACCGTCGGAGTGACCT | 60.990 | 66.667 | 20.51 | 0.00 | 45.23 | 3.85 |
1442 | 1596 | 5.006746 | CCGTATTTTGGTGCTGATACTTCTC | 59.993 | 44.000 | 0.00 | 0.00 | 0.00 | 2.87 |
1643 | 1797 | 0.830444 | TACTCGAGGTGGGTTGTGCT | 60.830 | 55.000 | 18.41 | 0.00 | 0.00 | 4.40 |
1853 | 2007 | 9.482627 | ACCTCTCTAAGCTTAATGATTATTTCG | 57.517 | 33.333 | 7.74 | 0.00 | 0.00 | 3.46 |
1920 | 2074 | 7.108841 | AGAAGTGTAGTGTCAGAGTTTGTTA | 57.891 | 36.000 | 0.00 | 0.00 | 0.00 | 2.41 |
2057 | 2213 | 6.789262 | GCAAATTGCTGAGCTTAATAGAAGA | 58.211 | 36.000 | 11.19 | 0.00 | 40.96 | 2.87 |
2150 | 2306 | 5.308014 | CTTGCTGCAAGTCCATATATGGTA | 58.692 | 41.667 | 29.38 | 14.04 | 39.47 | 3.25 |
2176 | 2332 | 7.944554 | ACAGGTATACCATTTATTTCCCATCTG | 59.055 | 37.037 | 23.87 | 9.47 | 38.89 | 2.90 |
2362 | 2518 | 3.650647 | GTGGAACCATCAAGAGGCA | 57.349 | 52.632 | 0.00 | 0.00 | 0.00 | 4.75 |
2451 | 2607 | 4.131649 | TGTCCATGTTATACCAAGACCG | 57.868 | 45.455 | 0.00 | 0.00 | 0.00 | 4.79 |
2504 | 2660 | 0.815734 | CCCTGTACGTGACCGATTCT | 59.184 | 55.000 | 0.00 | 0.00 | 37.88 | 2.40 |
2511 | 2667 | 1.548719 | ACGTGACCGATTCTGGAATCA | 59.451 | 47.619 | 19.23 | 3.04 | 45.60 | 2.57 |
2593 | 2749 | 6.184789 | TGGTTAACATGTATCCTCCTTTTCC | 58.815 | 40.000 | 8.10 | 0.00 | 0.00 | 3.13 |
2664 | 2821 | 7.559590 | ACATAGCTACTGAAAATCATGTTCC | 57.440 | 36.000 | 0.00 | 0.00 | 0.00 | 3.62 |
2746 | 2903 | 3.456380 | TGGGCCTCTGCTTCTTTTTAT | 57.544 | 42.857 | 4.53 | 0.00 | 37.74 | 1.40 |
2755 | 2912 | 8.190784 | GCCTCTGCTTCTTTTTATTGCTATAAA | 58.809 | 33.333 | 8.94 | 8.94 | 33.23 | 1.40 |
2813 | 2970 | 5.522460 | TGTATAGTCGTTGGCTAATGCTTTC | 59.478 | 40.000 | 0.00 | 0.00 | 39.59 | 2.62 |
2860 | 3017 | 6.803154 | ATTTGCTTCCTCTGTGTAACTTAC | 57.197 | 37.500 | 0.00 | 0.00 | 38.04 | 2.34 |
2877 | 3034 | 5.018539 | ACTTACGCAGATATGCCAGTTTA | 57.981 | 39.130 | 6.76 | 0.00 | 0.00 | 2.01 |
2914 | 3071 | 7.046652 | AGATGAAACACTATCCAGACATTCAG | 58.953 | 38.462 | 0.00 | 0.00 | 0.00 | 3.02 |
2967 | 3124 | 3.131396 | GACAAGACCTGTTAGTGGTGTG | 58.869 | 50.000 | 0.00 | 0.00 | 38.84 | 3.82 |
3104 | 3261 | 4.155826 | CCGAACTGAACCAAAGCAATATCA | 59.844 | 41.667 | 0.00 | 0.00 | 0.00 | 2.15 |
3118 | 3275 | 6.552445 | AGCAATATCACTAGGTGAGAACTT | 57.448 | 37.500 | 6.53 | 0.00 | 46.04 | 2.66 |
3388 | 3545 | 1.190833 | CCAGCCTCTGTGTCTCCTGT | 61.191 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
3530 | 3687 | 1.419374 | GACTTGCTACCTGTGACACG | 58.581 | 55.000 | 0.22 | 0.00 | 0.00 | 4.49 |
3539 | 3696 | 2.589442 | TGTGACACGGGGCGTTTC | 60.589 | 61.111 | 0.22 | 0.00 | 38.32 | 2.78 |
3686 | 3845 | 2.696526 | AGACCTGTACCTCTTGACCA | 57.303 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
3815 | 3974 | 2.176889 | CCTGGTATATACCTCCCCACG | 58.823 | 57.143 | 28.12 | 10.70 | 46.58 | 4.94 |
4032 | 4192 | 7.849804 | TCTCTAAGCAATTTATCAGGTTGAC | 57.150 | 36.000 | 0.00 | 0.00 | 0.00 | 3.18 |
4049 | 4209 | 4.148891 | GTTGACGAGCCTTTTGTAATTCG | 58.851 | 43.478 | 0.00 | 0.00 | 0.00 | 3.34 |
4050 | 4210 | 2.158841 | TGACGAGCCTTTTGTAATTCGC | 59.841 | 45.455 | 0.00 | 0.00 | 0.00 | 4.70 |
4067 | 4227 | 1.136305 | TCGCGCTGCTCTTATACCTTT | 59.864 | 47.619 | 5.56 | 0.00 | 0.00 | 3.11 |
4207 | 4367 | 7.169308 | CAGAGCACCCTAACAAGTTTATATACG | 59.831 | 40.741 | 0.00 | 0.00 | 0.00 | 3.06 |
4371 | 4539 | 7.441760 | TGTCCACGCTTGAGTTTTAGTAAATTA | 59.558 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
4394 | 4562 | 2.988010 | TGATTAGTGGCTAGTGGCTG | 57.012 | 50.000 | 0.00 | 0.00 | 41.46 | 4.85 |
4479 | 4647 | 3.181469 | ACATATTACAGTGCAGTACCCCG | 60.181 | 47.826 | 0.00 | 0.00 | 0.00 | 5.73 |
4481 | 4649 | 0.892755 | TTACAGTGCAGTACCCCGAG | 59.107 | 55.000 | 0.00 | 0.00 | 0.00 | 4.63 |
4494 | 4662 | 5.064325 | CAGTACCCCGAGTTTAGCATTTTAC | 59.936 | 44.000 | 0.00 | 0.00 | 0.00 | 2.01 |
4602 | 4770 | 4.700213 | CCTCGGTTGGATTCATGTAAGTTT | 59.300 | 41.667 | 0.00 | 0.00 | 0.00 | 2.66 |
4635 | 4803 | 7.601886 | ACAAATTGTTGTTGTTGACTGATCAAA | 59.398 | 29.630 | 0.00 | 0.00 | 46.01 | 2.69 |
4669 | 4837 | 6.378280 | AGACTTTTGAGTGTCCTGTTCATTTT | 59.622 | 34.615 | 0.00 | 0.00 | 34.02 | 1.82 |
4670 | 4838 | 6.564328 | ACTTTTGAGTGTCCTGTTCATTTTC | 58.436 | 36.000 | 0.00 | 0.00 | 0.00 | 2.29 |
4871 | 5056 | 7.504926 | AGTACTGTGAAAAGGGTCCATATTA | 57.495 | 36.000 | 0.00 | 0.00 | 0.00 | 0.98 |
5186 | 5371 | 1.507140 | TGAGCGGATGGGGTTATCTT | 58.493 | 50.000 | 0.00 | 0.00 | 0.00 | 2.40 |
5202 | 5387 | 6.183360 | GGGTTATCTTTTGGGAACTTGTTGAA | 60.183 | 38.462 | 0.00 | 0.00 | 0.00 | 2.69 |
5477 | 5663 | 9.158233 | GCCATACTTCTGTTGTAGTAATTGTTA | 57.842 | 33.333 | 0.00 | 0.00 | 31.53 | 2.41 |
5586 | 5772 | 1.347707 | CAGTAGTGGCCCAAAGTCTCA | 59.652 | 52.381 | 0.00 | 0.00 | 0.00 | 3.27 |
5683 | 5869 | 9.844790 | TTCTTATATGATTTTGCTTGACACAAG | 57.155 | 29.630 | 7.07 | 7.07 | 0.00 | 3.16 |
5697 | 5883 | 6.238484 | GCTTGACACAAGTATCTTGAAACTGT | 60.238 | 38.462 | 15.04 | 9.14 | 0.00 | 3.55 |
5830 | 6026 | 4.842380 | ACCTAAAGTAGAAGGGTTAGTGCA | 59.158 | 41.667 | 0.00 | 0.00 | 37.18 | 4.57 |
6129 | 6327 | 1.364269 | ATGAACGTTTGGGAGGGGTA | 58.636 | 50.000 | 0.46 | 0.00 | 0.00 | 3.69 |
6155 | 6353 | 1.236628 | CATGCTATTCAGGAGGCAGC | 58.763 | 55.000 | 0.00 | 0.00 | 38.11 | 5.25 |
6168 | 6366 | 2.359850 | GCAGCGGTGGGTGATTCA | 60.360 | 61.111 | 17.54 | 0.00 | 44.37 | 2.57 |
6188 | 6386 | 4.854173 | TCATAATTTACAGCAAGCCTGGA | 58.146 | 39.130 | 0.00 | 0.00 | 46.14 | 3.86 |
6256 | 6454 | 3.322254 | CCTTTAGATGTGGATAGCCGAGT | 59.678 | 47.826 | 0.00 | 0.00 | 36.79 | 4.18 |
6257 | 6455 | 4.551388 | CTTTAGATGTGGATAGCCGAGTC | 58.449 | 47.826 | 0.00 | 0.00 | 36.79 | 3.36 |
6394 | 6592 | 2.408050 | ACTGCTTGCTTCTTACGAGTG | 58.592 | 47.619 | 0.00 | 0.00 | 0.00 | 3.51 |
6427 | 6626 | 6.992063 | AACTACTCCAGCAAATCATTAGTG | 57.008 | 37.500 | 0.00 | 0.00 | 0.00 | 2.74 |
6460 | 6659 | 2.106566 | TCCTGTGTTTGGCATTGTTGT | 58.893 | 42.857 | 0.00 | 0.00 | 0.00 | 3.32 |
6462 | 6661 | 2.101249 | CCTGTGTTTGGCATTGTTGTCT | 59.899 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
6728 | 7011 | 8.510243 | AATCTGCAAATGATTATGTAGACACA | 57.490 | 30.769 | 9.07 | 0.00 | 40.33 | 3.72 |
6779 | 7062 | 1.938585 | TCCTCGGTCCTCAGTTTCAT | 58.061 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
6843 | 7212 | 5.241506 | TGTTGCTTAATCCTTCCTGAAACAG | 59.758 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
6879 | 7248 | 3.812609 | ACGCATACTGTTGTTCATTGTCA | 59.187 | 39.130 | 0.00 | 0.00 | 0.00 | 3.58 |
6948 | 7317 | 9.639563 | AGACGATCTCATGATAATGGTCTATAT | 57.360 | 33.333 | 23.01 | 9.09 | 32.45 | 0.86 |
7157 | 7526 | 2.625737 | CGTGTGAGCCTGATTCTGATT | 58.374 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
7298 | 7675 | 3.412237 | TGCCTCTTTGGTAACCACTAC | 57.588 | 47.619 | 0.00 | 0.00 | 38.35 | 2.73 |
7323 | 8047 | 5.871524 | GCAGAGTGAGTTCTCATGTCATTTA | 59.128 | 40.000 | 5.80 | 0.00 | 36.97 | 1.40 |
7324 | 8048 | 6.538021 | GCAGAGTGAGTTCTCATGTCATTTAT | 59.462 | 38.462 | 5.80 | 0.00 | 36.97 | 1.40 |
7327 | 8051 | 8.944029 | AGAGTGAGTTCTCATGTCATTTATTTG | 58.056 | 33.333 | 5.80 | 0.00 | 36.97 | 2.32 |
7353 | 8077 | 3.503748 | GGGGAACAAAGAGACATTCACAG | 59.496 | 47.826 | 0.00 | 0.00 | 0.00 | 3.66 |
7381 | 8105 | 5.526115 | TGATTGCTTGCAAAAAGAGAGAAG | 58.474 | 37.500 | 12.17 | 0.00 | 0.00 | 2.85 |
7434 | 8216 | 2.946329 | TGCACGTGGTTCTTTACATTGT | 59.054 | 40.909 | 18.88 | 0.00 | 0.00 | 2.71 |
7435 | 8217 | 3.378742 | TGCACGTGGTTCTTTACATTGTT | 59.621 | 39.130 | 18.88 | 0.00 | 0.00 | 2.83 |
7438 | 8220 | 5.289917 | GCACGTGGTTCTTTACATTGTTTTT | 59.710 | 36.000 | 18.88 | 0.00 | 0.00 | 1.94 |
7473 | 8255 | 5.222631 | GTTCCTTTGCACTTCGATGATTTT | 58.777 | 37.500 | 5.16 | 0.00 | 0.00 | 1.82 |
7476 | 8258 | 4.082571 | CCTTTGCACTTCGATGATTTTCCT | 60.083 | 41.667 | 5.16 | 0.00 | 0.00 | 3.36 |
7507 | 8289 | 3.591196 | TGCACTTGATATTTTGCCACC | 57.409 | 42.857 | 0.00 | 0.00 | 33.86 | 4.61 |
7512 | 8294 | 5.111293 | CACTTGATATTTTGCCACCCATTC | 58.889 | 41.667 | 0.00 | 0.00 | 0.00 | 2.67 |
7534 | 8316 | 4.649674 | TCCCTAGATAGCTGTAGTTTGGTG | 59.350 | 45.833 | 0.00 | 0.00 | 0.00 | 4.17 |
7535 | 8317 | 4.202264 | CCCTAGATAGCTGTAGTTTGGTGG | 60.202 | 50.000 | 0.00 | 0.00 | 0.00 | 4.61 |
7536 | 8318 | 4.649674 | CCTAGATAGCTGTAGTTTGGTGGA | 59.350 | 45.833 | 0.00 | 0.00 | 0.00 | 4.02 |
7537 | 8319 | 5.128827 | CCTAGATAGCTGTAGTTTGGTGGAA | 59.871 | 44.000 | 0.00 | 0.00 | 0.00 | 3.53 |
7538 | 8320 | 5.700402 | AGATAGCTGTAGTTTGGTGGAAT | 57.300 | 39.130 | 0.00 | 0.00 | 0.00 | 3.01 |
7539 | 8321 | 6.067217 | AGATAGCTGTAGTTTGGTGGAATT | 57.933 | 37.500 | 0.00 | 0.00 | 0.00 | 2.17 |
7540 | 8322 | 6.116126 | AGATAGCTGTAGTTTGGTGGAATTC | 58.884 | 40.000 | 0.00 | 0.00 | 0.00 | 2.17 |
7541 | 8323 | 3.421844 | AGCTGTAGTTTGGTGGAATTCC | 58.578 | 45.455 | 18.17 | 18.17 | 0.00 | 3.01 |
7542 | 8324 | 3.074538 | AGCTGTAGTTTGGTGGAATTCCT | 59.925 | 43.478 | 24.73 | 5.74 | 36.82 | 3.36 |
7543 | 8325 | 4.288626 | AGCTGTAGTTTGGTGGAATTCCTA | 59.711 | 41.667 | 24.73 | 9.10 | 36.82 | 2.94 |
7544 | 8326 | 4.636206 | GCTGTAGTTTGGTGGAATTCCTAG | 59.364 | 45.833 | 24.73 | 8.62 | 36.82 | 3.02 |
7545 | 8327 | 5.803470 | GCTGTAGTTTGGTGGAATTCCTAGT | 60.803 | 44.000 | 24.73 | 10.34 | 36.82 | 2.57 |
7546 | 8328 | 6.195600 | TGTAGTTTGGTGGAATTCCTAGTT | 57.804 | 37.500 | 24.73 | 7.21 | 36.82 | 2.24 |
7547 | 8329 | 6.607019 | TGTAGTTTGGTGGAATTCCTAGTTT | 58.393 | 36.000 | 24.73 | 7.68 | 36.82 | 2.66 |
7548 | 8330 | 6.488683 | TGTAGTTTGGTGGAATTCCTAGTTTG | 59.511 | 38.462 | 24.73 | 0.00 | 36.82 | 2.93 |
7549 | 8331 | 4.832823 | AGTTTGGTGGAATTCCTAGTTTGG | 59.167 | 41.667 | 24.73 | 0.00 | 36.82 | 3.28 |
7550 | 8332 | 4.463050 | TTGGTGGAATTCCTAGTTTGGT | 57.537 | 40.909 | 24.73 | 0.00 | 36.82 | 3.67 |
7573 | 8368 | 7.711339 | TGGTTTGGTAAACAATTGGTTATCAAC | 59.289 | 33.333 | 32.00 | 25.92 | 45.02 | 3.18 |
7576 | 8371 | 6.239629 | TTGGTAAACAATTGGTTATCAACCCC | 60.240 | 38.462 | 29.62 | 19.80 | 41.76 | 4.95 |
7582 | 8377 | 1.153025 | GGTTATCAACCCCGGAGCC | 60.153 | 63.158 | 0.73 | 0.00 | 46.12 | 4.70 |
7645 | 8440 | 3.308402 | GGTCAACCATGAGGAGGATGAAA | 60.308 | 47.826 | 0.00 | 0.00 | 39.28 | 2.69 |
7646 | 8441 | 3.944015 | GTCAACCATGAGGAGGATGAAAG | 59.056 | 47.826 | 0.00 | 0.00 | 39.28 | 2.62 |
7648 | 8443 | 4.289410 | TCAACCATGAGGAGGATGAAAGAA | 59.711 | 41.667 | 0.00 | 0.00 | 35.35 | 2.52 |
7657 | 8828 | 1.032114 | GGATGAAAGAAGGCCACGGG | 61.032 | 60.000 | 5.01 | 0.00 | 0.00 | 5.28 |
7668 | 8839 | 4.697756 | CCACGGGCTCGCTTTCCA | 62.698 | 66.667 | 5.51 | 0.00 | 40.63 | 3.53 |
7669 | 8840 | 2.436646 | CACGGGCTCGCTTTCCAT | 60.437 | 61.111 | 5.51 | 0.00 | 40.63 | 3.41 |
7670 | 8841 | 2.436646 | ACGGGCTCGCTTTCCATG | 60.437 | 61.111 | 5.51 | 0.00 | 40.63 | 3.66 |
7671 | 8842 | 3.880846 | CGGGCTCGCTTTCCATGC | 61.881 | 66.667 | 0.00 | 0.00 | 0.00 | 4.06 |
7672 | 8843 | 3.521796 | GGGCTCGCTTTCCATGCC | 61.522 | 66.667 | 0.00 | 0.00 | 42.56 | 4.40 |
7673 | 8844 | 3.521796 | GGCTCGCTTTCCATGCCC | 61.522 | 66.667 | 0.00 | 0.00 | 37.81 | 5.36 |
7674 | 8845 | 3.880846 | GCTCGCTTTCCATGCCCG | 61.881 | 66.667 | 0.00 | 0.00 | 0.00 | 6.13 |
7675 | 8846 | 2.436646 | CTCGCTTTCCATGCCCGT | 60.437 | 61.111 | 0.00 | 0.00 | 0.00 | 5.28 |
7676 | 8847 | 2.435938 | TCGCTTTCCATGCCCGTC | 60.436 | 61.111 | 0.00 | 0.00 | 0.00 | 4.79 |
7677 | 8848 | 2.436646 | CGCTTTCCATGCCCGTCT | 60.437 | 61.111 | 0.00 | 0.00 | 0.00 | 4.18 |
7678 | 8849 | 2.040544 | CGCTTTCCATGCCCGTCTT | 61.041 | 57.895 | 0.00 | 0.00 | 0.00 | 3.01 |
7679 | 8850 | 1.803289 | GCTTTCCATGCCCGTCTTC | 59.197 | 57.895 | 0.00 | 0.00 | 0.00 | 2.87 |
7680 | 8851 | 1.657751 | GCTTTCCATGCCCGTCTTCC | 61.658 | 60.000 | 0.00 | 0.00 | 0.00 | 3.46 |
7681 | 8852 | 1.369091 | CTTTCCATGCCCGTCTTCCG | 61.369 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
7682 | 8853 | 1.832719 | TTTCCATGCCCGTCTTCCGA | 61.833 | 55.000 | 0.00 | 0.00 | 39.56 | 4.55 |
7683 | 8854 | 2.202932 | CCATGCCCGTCTTCCGAG | 60.203 | 66.667 | 0.00 | 0.00 | 39.56 | 4.63 |
7684 | 8855 | 2.721167 | CCATGCCCGTCTTCCGAGA | 61.721 | 63.158 | 0.00 | 0.00 | 39.56 | 4.04 |
7685 | 8856 | 1.227089 | CATGCCCGTCTTCCGAGAG | 60.227 | 63.158 | 0.00 | 0.00 | 39.56 | 3.20 |
7686 | 8857 | 1.379977 | ATGCCCGTCTTCCGAGAGA | 60.380 | 57.895 | 0.00 | 0.00 | 39.56 | 3.10 |
7687 | 8858 | 0.757188 | ATGCCCGTCTTCCGAGAGAT | 60.757 | 55.000 | 0.00 | 0.00 | 39.56 | 2.75 |
7688 | 8859 | 0.970937 | TGCCCGTCTTCCGAGAGATT | 60.971 | 55.000 | 0.00 | 0.00 | 39.56 | 2.40 |
7689 | 8860 | 0.175989 | GCCCGTCTTCCGAGAGATTT | 59.824 | 55.000 | 0.00 | 0.00 | 39.56 | 2.17 |
7690 | 8861 | 1.927895 | CCCGTCTTCCGAGAGATTTG | 58.072 | 55.000 | 0.00 | 0.00 | 39.56 | 2.32 |
7691 | 8862 | 1.471676 | CCCGTCTTCCGAGAGATTTGG | 60.472 | 57.143 | 0.00 | 0.00 | 39.56 | 3.28 |
7692 | 8863 | 1.476891 | CCGTCTTCCGAGAGATTTGGA | 59.523 | 52.381 | 0.00 | 0.00 | 39.56 | 3.53 |
7693 | 8864 | 2.094182 | CCGTCTTCCGAGAGATTTGGAA | 60.094 | 50.000 | 0.00 | 0.00 | 45.43 | 3.53 |
7694 | 8865 | 3.430929 | CCGTCTTCCGAGAGATTTGGAAT | 60.431 | 47.826 | 0.00 | 0.00 | 46.22 | 3.01 |
7695 | 8866 | 3.553511 | CGTCTTCCGAGAGATTTGGAATG | 59.446 | 47.826 | 0.00 | 0.00 | 46.22 | 2.67 |
7696 | 8867 | 4.678044 | CGTCTTCCGAGAGATTTGGAATGA | 60.678 | 45.833 | 0.00 | 0.00 | 46.22 | 2.57 |
7697 | 8868 | 5.178797 | GTCTTCCGAGAGATTTGGAATGAA | 58.821 | 41.667 | 0.00 | 0.00 | 46.22 | 2.57 |
7698 | 8869 | 5.293079 | GTCTTCCGAGAGATTTGGAATGAAG | 59.707 | 44.000 | 0.00 | 0.00 | 46.22 | 3.02 |
7699 | 8870 | 5.187772 | TCTTCCGAGAGATTTGGAATGAAGA | 59.812 | 40.000 | 0.00 | 0.00 | 46.22 | 2.87 |
7700 | 8871 | 5.620738 | TCCGAGAGATTTGGAATGAAGAT | 57.379 | 39.130 | 0.00 | 0.00 | 36.35 | 2.40 |
7701 | 8872 | 6.731292 | TCCGAGAGATTTGGAATGAAGATA | 57.269 | 37.500 | 0.00 | 0.00 | 36.35 | 1.98 |
7702 | 8873 | 6.753180 | TCCGAGAGATTTGGAATGAAGATAG | 58.247 | 40.000 | 0.00 | 0.00 | 36.35 | 2.08 |
7703 | 8874 | 6.325028 | TCCGAGAGATTTGGAATGAAGATAGT | 59.675 | 38.462 | 0.00 | 0.00 | 36.35 | 2.12 |
7704 | 8875 | 6.644592 | CCGAGAGATTTGGAATGAAGATAGTC | 59.355 | 42.308 | 0.00 | 0.00 | 31.06 | 2.59 |
7722 | 8893 | 8.707796 | AGATAGTCTTCCGGAAAATATCTACA | 57.292 | 34.615 | 28.22 | 6.35 | 30.96 | 2.74 |
7723 | 8894 | 9.144298 | AGATAGTCTTCCGGAAAATATCTACAA | 57.856 | 33.333 | 28.22 | 5.93 | 30.96 | 2.41 |
7750 | 8921 | 7.099266 | CCATCAATTAGTTTGGCTAACATCA | 57.901 | 36.000 | 14.00 | 0.00 | 41.93 | 3.07 |
7768 | 8939 | 3.358111 | TCAGAAGAGAGATGGAGTCGT | 57.642 | 47.619 | 0.00 | 0.00 | 0.00 | 4.34 |
7776 | 8947 | 3.537580 | AGAGATGGAGTCGTAGAGTGTC | 58.462 | 50.000 | 0.00 | 0.00 | 42.24 | 3.67 |
7778 | 8949 | 2.008329 | GATGGAGTCGTAGAGTGTCGT | 58.992 | 52.381 | 0.00 | 0.00 | 42.24 | 4.34 |
7789 | 9123 | 1.816863 | GAGTGTCGTGGAGGCCAAGA | 61.817 | 60.000 | 5.01 | 0.00 | 39.51 | 3.02 |
7840 | 9178 | 2.094752 | CCCCTAAATGTTTGAACTGCGG | 60.095 | 50.000 | 0.00 | 0.00 | 0.00 | 5.69 |
7842 | 9180 | 2.817258 | CCTAAATGTTTGAACTGCGGGA | 59.183 | 45.455 | 0.00 | 0.00 | 0.00 | 5.14 |
7847 | 9185 | 0.168128 | GTTTGAACTGCGGGATTCGG | 59.832 | 55.000 | 0.00 | 0.00 | 39.69 | 4.30 |
7897 | 9235 | 1.098050 | AAATGTCCGCAGAGCAATCC | 58.902 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
7899 | 9237 | 0.463295 | ATGTCCGCAGAGCAATCCAG | 60.463 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
7901 | 9239 | 1.086634 | GTCCGCAGAGCAATCCAGTC | 61.087 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
7915 | 9253 | 1.275291 | TCCAGTCGTCTGAAATCCCAC | 59.725 | 52.381 | 11.41 | 0.00 | 43.76 | 4.61 |
7919 | 9257 | 3.058914 | CAGTCGTCTGAAATCCCACAAAC | 60.059 | 47.826 | 3.36 | 0.00 | 43.76 | 2.93 |
7924 | 9262 | 2.041081 | TCTGAAATCCCACAAACCGGAT | 59.959 | 45.455 | 9.46 | 0.00 | 40.75 | 4.18 |
7925 | 9263 | 2.164219 | CTGAAATCCCACAAACCGGATG | 59.836 | 50.000 | 9.46 | 9.74 | 38.91 | 3.51 |
7934 | 9272 | 3.142951 | CACAAACCGGATGTAAACCTGA | 58.857 | 45.455 | 9.46 | 0.00 | 0.00 | 3.86 |
7937 | 9275 | 1.946984 | ACCGGATGTAAACCTGAGGA | 58.053 | 50.000 | 9.46 | 0.00 | 0.00 | 3.71 |
7939 | 9277 | 2.640826 | ACCGGATGTAAACCTGAGGAAA | 59.359 | 45.455 | 9.46 | 0.00 | 0.00 | 3.13 |
7943 | 9281 | 5.883673 | CCGGATGTAAACCTGAGGAAATTTA | 59.116 | 40.000 | 4.99 | 0.00 | 0.00 | 1.40 |
7945 | 9283 | 6.458342 | CGGATGTAAACCTGAGGAAATTTAGC | 60.458 | 42.308 | 4.99 | 0.00 | 0.00 | 3.09 |
7946 | 9284 | 5.873179 | TGTAAACCTGAGGAAATTTAGCG | 57.127 | 39.130 | 4.99 | 0.00 | 0.00 | 4.26 |
7948 | 9286 | 3.713826 | AACCTGAGGAAATTTAGCGGA | 57.286 | 42.857 | 4.99 | 0.00 | 0.00 | 5.54 |
7949 | 9287 | 3.268023 | ACCTGAGGAAATTTAGCGGAG | 57.732 | 47.619 | 4.99 | 0.00 | 0.00 | 4.63 |
7950 | 9288 | 2.572104 | ACCTGAGGAAATTTAGCGGAGT | 59.428 | 45.455 | 4.99 | 0.00 | 0.00 | 3.85 |
7951 | 9289 | 3.198872 | CCTGAGGAAATTTAGCGGAGTC | 58.801 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
7952 | 9290 | 2.860735 | CTGAGGAAATTTAGCGGAGTCG | 59.139 | 50.000 | 0.00 | 0.00 | 39.81 | 4.18 |
7953 | 9291 | 2.494471 | TGAGGAAATTTAGCGGAGTCGA | 59.506 | 45.455 | 0.00 | 0.00 | 39.00 | 4.20 |
7961 | 9301 | 0.743701 | TAGCGGAGTCGAGACAGTCC | 60.744 | 60.000 | 5.99 | 4.02 | 39.00 | 3.85 |
7962 | 9302 | 2.041686 | GCGGAGTCGAGACAGTCCT | 61.042 | 63.158 | 5.99 | 0.00 | 39.00 | 3.85 |
7971 | 9311 | 2.116983 | GAGACAGTCCTGCTTGGCCA | 62.117 | 60.000 | 0.00 | 0.00 | 35.26 | 5.36 |
7972 | 9312 | 1.968540 | GACAGTCCTGCTTGGCCAC | 60.969 | 63.158 | 3.88 | 0.00 | 35.26 | 5.01 |
7973 | 9313 | 2.403132 | GACAGTCCTGCTTGGCCACT | 62.403 | 60.000 | 3.88 | 0.00 | 35.26 | 4.00 |
7974 | 9314 | 1.970114 | CAGTCCTGCTTGGCCACTG | 60.970 | 63.158 | 3.88 | 3.42 | 35.31 | 3.66 |
7975 | 9315 | 2.113986 | GTCCTGCTTGGCCACTGT | 59.886 | 61.111 | 3.88 | 0.00 | 35.26 | 3.55 |
7976 | 9316 | 1.968540 | GTCCTGCTTGGCCACTGTC | 60.969 | 63.158 | 3.88 | 0.00 | 35.26 | 3.51 |
7977 | 9317 | 2.113774 | CCTGCTTGGCCACTGTCA | 59.886 | 61.111 | 3.88 | 0.00 | 0.00 | 3.58 |
7978 | 9318 | 1.970114 | CCTGCTTGGCCACTGTCAG | 60.970 | 63.158 | 3.88 | 10.29 | 0.00 | 3.51 |
7979 | 9319 | 1.228063 | CTGCTTGGCCACTGTCAGT | 60.228 | 57.895 | 3.88 | 0.00 | 0.00 | 3.41 |
7981 | 9321 | 0.819259 | TGCTTGGCCACTGTCAGTTC | 60.819 | 55.000 | 3.88 | 0.00 | 0.00 | 3.01 |
7982 | 9322 | 1.845809 | GCTTGGCCACTGTCAGTTCG | 61.846 | 60.000 | 3.88 | 0.00 | 0.00 | 3.95 |
7983 | 9323 | 0.249868 | CTTGGCCACTGTCAGTTCGA | 60.250 | 55.000 | 3.88 | 0.00 | 0.00 | 3.71 |
7984 | 9324 | 0.531974 | TTGGCCACTGTCAGTTCGAC | 60.532 | 55.000 | 3.88 | 0.00 | 45.61 | 4.20 |
7985 | 9325 | 1.367840 | GGCCACTGTCAGTTCGACT | 59.632 | 57.895 | 1.67 | 0.00 | 45.60 | 4.18 |
7986 | 9326 | 0.601558 | GGCCACTGTCAGTTCGACTA | 59.398 | 55.000 | 1.67 | 0.00 | 45.60 | 2.59 |
7987 | 9327 | 1.669211 | GGCCACTGTCAGTTCGACTAC | 60.669 | 57.143 | 1.67 | 0.00 | 45.60 | 2.73 |
7988 | 9328 | 1.000607 | GCCACTGTCAGTTCGACTACA | 60.001 | 52.381 | 1.67 | 0.00 | 45.60 | 2.74 |
7989 | 9329 | 2.352814 | GCCACTGTCAGTTCGACTACAT | 60.353 | 50.000 | 1.67 | 0.00 | 45.60 | 2.29 |
7990 | 9330 | 3.245797 | CCACTGTCAGTTCGACTACATG | 58.754 | 50.000 | 1.67 | 0.00 | 45.60 | 3.21 |
7991 | 9331 | 3.305403 | CCACTGTCAGTTCGACTACATGT | 60.305 | 47.826 | 1.67 | 2.69 | 45.60 | 3.21 |
7992 | 9332 | 4.299155 | CACTGTCAGTTCGACTACATGTT | 58.701 | 43.478 | 2.30 | 0.00 | 45.60 | 2.71 |
7993 | 9333 | 4.383052 | CACTGTCAGTTCGACTACATGTTC | 59.617 | 45.833 | 2.30 | 0.00 | 45.60 | 3.18 |
7994 | 9334 | 4.278669 | ACTGTCAGTTCGACTACATGTTCT | 59.721 | 41.667 | 2.30 | 0.00 | 45.60 | 3.01 |
7995 | 9335 | 5.196341 | TGTCAGTTCGACTACATGTTCTT | 57.804 | 39.130 | 2.30 | 0.00 | 45.60 | 2.52 |
7996 | 9336 | 6.016527 | ACTGTCAGTTCGACTACATGTTCTTA | 60.017 | 38.462 | 2.30 | 0.00 | 45.60 | 2.10 |
8009 | 9349 | 5.126067 | ACATGTTCTTATAGTCCATGTGCC | 58.874 | 41.667 | 0.00 | 0.00 | 43.16 | 5.01 |
8011 | 9351 | 4.769688 | TGTTCTTATAGTCCATGTGCCTG | 58.230 | 43.478 | 0.00 | 0.00 | 0.00 | 4.85 |
8012 | 9352 | 4.130118 | GTTCTTATAGTCCATGTGCCTGG | 58.870 | 47.826 | 0.00 | 0.00 | 37.66 | 4.45 |
8013 | 9353 | 2.104792 | TCTTATAGTCCATGTGCCTGGC | 59.895 | 50.000 | 12.87 | 12.87 | 36.16 | 4.85 |
8016 | 9356 | 0.326143 | TAGTCCATGTGCCTGGCCTA | 60.326 | 55.000 | 17.53 | 5.22 | 36.16 | 3.93 |
8018 | 9358 | 2.124151 | CCATGTGCCTGGCCTACC | 60.124 | 66.667 | 17.53 | 1.94 | 0.00 | 3.18 |
8019 | 9359 | 2.514592 | CATGTGCCTGGCCTACCG | 60.515 | 66.667 | 17.53 | 0.00 | 39.70 | 4.02 |
8045 | 9410 | 2.290323 | GGCCGGATTTGATGCCTAGTAT | 60.290 | 50.000 | 5.05 | 0.00 | 40.77 | 2.12 |
8058 | 9423 | 6.652062 | TGATGCCTAGTATTTGATGCATACAG | 59.348 | 38.462 | 0.00 | 0.00 | 39.36 | 2.74 |
8065 | 9430 | 7.268199 | AGTATTTGATGCATACAGTTGGATG | 57.732 | 36.000 | 0.00 | 0.00 | 30.55 | 3.51 |
8068 | 9433 | 4.492494 | TGATGCATACAGTTGGATGAGT | 57.508 | 40.909 | 8.51 | 0.00 | 0.00 | 3.41 |
8070 | 9435 | 3.979101 | TGCATACAGTTGGATGAGTGA | 57.021 | 42.857 | 8.51 | 0.00 | 0.00 | 3.41 |
8071 | 9436 | 3.599343 | TGCATACAGTTGGATGAGTGAC | 58.401 | 45.455 | 8.51 | 0.00 | 0.00 | 3.67 |
8076 | 9441 | 2.564947 | ACAGTTGGATGAGTGACTCTCC | 59.435 | 50.000 | 14.42 | 16.78 | 42.12 | 3.71 |
8077 | 9442 | 2.830923 | CAGTTGGATGAGTGACTCTCCT | 59.169 | 50.000 | 22.61 | 7.38 | 42.12 | 3.69 |
8078 | 9443 | 4.019858 | CAGTTGGATGAGTGACTCTCCTA | 58.980 | 47.826 | 22.61 | 16.45 | 42.12 | 2.94 |
8083 | 9448 | 2.581216 | TGAGTGACTCTCCTACCGTT | 57.419 | 50.000 | 14.42 | 0.00 | 42.12 | 4.44 |
8089 | 9454 | 2.696707 | TGACTCTCCTACCGTTGTTGTT | 59.303 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
8172 | 9537 | 4.407296 | TGGAGTTGCCCTAAACATTTTGTT | 59.593 | 37.500 | 0.00 | 0.00 | 37.87 | 2.83 |
8174 | 9539 | 5.452636 | GGAGTTGCCCTAAACATTTTGTTGA | 60.453 | 40.000 | 0.00 | 0.00 | 40.14 | 3.18 |
8238 | 9603 | 7.606456 | TCTCACTTTGTACACACTTTTCTTTCT | 59.394 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
8285 | 9651 | 6.394025 | AAACTTACCGTTGCTATGGAAAAA | 57.606 | 33.333 | 13.67 | 3.90 | 35.61 | 1.94 |
8311 | 10591 | 8.947115 | ACATTTAGAAGTAGATTAAAGTGTGCC | 58.053 | 33.333 | 0.00 | 0.00 | 0.00 | 5.01 |
8317 | 10597 | 6.552445 | AGTAGATTAAAGTGTGCCAGAGAT | 57.448 | 37.500 | 0.00 | 0.00 | 0.00 | 2.75 |
8318 | 10598 | 7.661536 | AGTAGATTAAAGTGTGCCAGAGATA | 57.338 | 36.000 | 0.00 | 0.00 | 0.00 | 1.98 |
8326 | 10606 | 6.992664 | AAGTGTGCCAGAGATATAAGATCT | 57.007 | 37.500 | 0.00 | 0.00 | 0.00 | 2.75 |
8327 | 10607 | 6.992664 | AGTGTGCCAGAGATATAAGATCTT | 57.007 | 37.500 | 13.56 | 13.56 | 0.00 | 2.40 |
8331 | 10611 | 7.384660 | GTGTGCCAGAGATATAAGATCTTTGAG | 59.615 | 40.741 | 14.36 | 0.15 | 33.57 | 3.02 |
8360 | 10640 | 3.119280 | TGACGAACCGAGCAATCTTGATA | 60.119 | 43.478 | 0.00 | 0.00 | 0.00 | 2.15 |
8375 | 10655 | 9.049523 | GCAATCTTGATATGATGTACTTTCTCA | 57.950 | 33.333 | 0.00 | 0.00 | 0.00 | 3.27 |
8390 | 10670 | 8.836413 | TGTACTTTCTCAGTTCCAAAATACTTG | 58.164 | 33.333 | 0.00 | 0.00 | 36.88 | 3.16 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
46 | 47 | 2.834549 | TCAAGAGGTAGAGGAGGCTTTG | 59.165 | 50.000 | 0.00 | 0.00 | 0.00 | 2.77 |
58 | 61 | 8.705594 | CTCTTGTATTAAATCCCTCAAGAGGTA | 58.294 | 37.037 | 18.83 | 0.00 | 46.83 | 3.08 |
59 | 62 | 7.569240 | CTCTTGTATTAAATCCCTCAAGAGGT | 58.431 | 38.462 | 18.83 | 0.00 | 46.83 | 3.85 |
62 | 65 | 8.146053 | TGACTCTTGTATTAAATCCCTCAAGA | 57.854 | 34.615 | 0.00 | 0.00 | 38.84 | 3.02 |
71 | 74 | 8.827177 | TCACTCGTTTGACTCTTGTATTAAAT | 57.173 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
139 | 142 | 5.113383 | CAACATCATTGGTAGCATTTGCAT | 58.887 | 37.500 | 5.20 | 0.00 | 45.16 | 3.96 |
142 | 145 | 5.712004 | TGACAACATCATTGGTAGCATTTG | 58.288 | 37.500 | 0.00 | 0.00 | 29.99 | 2.32 |
143 | 146 | 5.477984 | ACTGACAACATCATTGGTAGCATTT | 59.522 | 36.000 | 0.00 | 0.00 | 36.48 | 2.32 |
150 | 153 | 3.415212 | CCTCACTGACAACATCATTGGT | 58.585 | 45.455 | 0.00 | 0.00 | 38.29 | 3.67 |
155 | 158 | 0.678950 | TCGCCTCACTGACAACATCA | 59.321 | 50.000 | 0.00 | 0.00 | 35.45 | 3.07 |
165 | 168 | 3.764434 | TGAAAACTCTAGATCGCCTCACT | 59.236 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
228 | 231 | 3.187227 | GCGTTCACATCACACTGAAGAAT | 59.813 | 43.478 | 0.00 | 0.00 | 0.00 | 2.40 |
230 | 233 | 2.135139 | GCGTTCACATCACACTGAAGA | 58.865 | 47.619 | 0.00 | 0.00 | 0.00 | 2.87 |
231 | 234 | 2.096565 | CAGCGTTCACATCACACTGAAG | 60.097 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
234 | 237 | 1.070376 | CACAGCGTTCACATCACACTG | 60.070 | 52.381 | 0.00 | 0.00 | 0.00 | 3.66 |
235 | 238 | 1.220529 | CACAGCGTTCACATCACACT | 58.779 | 50.000 | 0.00 | 0.00 | 0.00 | 3.55 |
238 | 241 | 1.207593 | GCCACAGCGTTCACATCAC | 59.792 | 57.895 | 0.00 | 0.00 | 0.00 | 3.06 |
239 | 242 | 3.654201 | GCCACAGCGTTCACATCA | 58.346 | 55.556 | 0.00 | 0.00 | 0.00 | 3.07 |
250 | 253 | 0.381801 | AAGTTCAAGCAACGCCACAG | 59.618 | 50.000 | 0.00 | 0.00 | 40.32 | 3.66 |
266 | 269 | 4.310769 | CAAGGTCGTTCTCAAGATCAAGT | 58.689 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
284 | 287 | 1.407437 | GCCATATATCGAGGCCCAAGG | 60.407 | 57.143 | 0.00 | 0.00 | 42.58 | 3.61 |
285 | 288 | 1.740380 | CGCCATATATCGAGGCCCAAG | 60.740 | 57.143 | 0.00 | 0.00 | 45.56 | 3.61 |
286 | 289 | 0.249120 | CGCCATATATCGAGGCCCAA | 59.751 | 55.000 | 0.00 | 0.00 | 45.56 | 4.12 |
287 | 290 | 1.897423 | CGCCATATATCGAGGCCCA | 59.103 | 57.895 | 0.00 | 0.00 | 45.56 | 5.36 |
295 | 298 | 4.034858 | CCAAGTGATGATGCGCCATATATC | 59.965 | 45.833 | 4.18 | 0.48 | 0.00 | 1.63 |
304 | 307 | 1.202110 | GCTCAACCAAGTGATGATGCG | 60.202 | 52.381 | 0.00 | 0.00 | 0.00 | 4.73 |
344 | 348 | 2.334023 | AGAACTAGCCCCTCATGATCC | 58.666 | 52.381 | 0.00 | 0.00 | 0.00 | 3.36 |
359 | 363 | 9.274206 | GAAAGTACTAATCCAAGAACAAGAACT | 57.726 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
411 | 415 | 7.440523 | AAAAAGTATCACTGATCCAAGTCAC | 57.559 | 36.000 | 0.00 | 0.00 | 0.00 | 3.67 |
458 | 462 | 3.287222 | GTTAGCATTGTAGGATGGCCAA | 58.713 | 45.455 | 10.96 | 0.00 | 36.29 | 4.52 |
459 | 463 | 2.240921 | TGTTAGCATTGTAGGATGGCCA | 59.759 | 45.455 | 8.56 | 8.56 | 36.29 | 5.36 |
461 | 465 | 2.618709 | GGTGTTAGCATTGTAGGATGGC | 59.381 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
498 | 502 | 9.976511 | CATTGATATGGTGAGATTTTTAGCATT | 57.023 | 29.630 | 0.00 | 0.00 | 34.69 | 3.56 |
519 | 523 | 0.558220 | TTTGTGGTGGGACCCATTGA | 59.442 | 50.000 | 18.51 | 0.12 | 37.50 | 2.57 |
601 | 605 | 3.428589 | GGCCTACTTAGTTGTCCACGTAG | 60.429 | 52.174 | 0.00 | 0.00 | 0.00 | 3.51 |
769 | 773 | 7.014808 | TCCCCACTTAAAGTCCAATTTTTAGTG | 59.985 | 37.037 | 8.90 | 8.90 | 35.52 | 2.74 |
840 | 847 | 9.003658 | CACTTGAAATACTCCACACTAAAAGAT | 57.996 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
841 | 848 | 7.990886 | ACACTTGAAATACTCCACACTAAAAGA | 59.009 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
842 | 849 | 8.070171 | CACACTTGAAATACTCCACACTAAAAG | 58.930 | 37.037 | 0.00 | 0.00 | 0.00 | 2.27 |
843 | 850 | 7.771361 | TCACACTTGAAATACTCCACACTAAAA | 59.229 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
844 | 851 | 7.276658 | TCACACTTGAAATACTCCACACTAAA | 58.723 | 34.615 | 0.00 | 0.00 | 0.00 | 1.85 |
845 | 852 | 6.822442 | TCACACTTGAAATACTCCACACTAA | 58.178 | 36.000 | 0.00 | 0.00 | 0.00 | 2.24 |
846 | 853 | 6.413783 | TCACACTTGAAATACTCCACACTA | 57.586 | 37.500 | 0.00 | 0.00 | 0.00 | 2.74 |
847 | 854 | 5.290493 | TCACACTTGAAATACTCCACACT | 57.710 | 39.130 | 0.00 | 0.00 | 0.00 | 3.55 |
848 | 855 | 7.667043 | TTATCACACTTGAAATACTCCACAC | 57.333 | 36.000 | 0.00 | 0.00 | 34.61 | 3.82 |
849 | 856 | 7.936847 | AGTTTATCACACTTGAAATACTCCACA | 59.063 | 33.333 | 0.00 | 0.00 | 34.61 | 4.17 |
850 | 857 | 8.324163 | AGTTTATCACACTTGAAATACTCCAC | 57.676 | 34.615 | 0.00 | 0.00 | 34.61 | 4.02 |
851 | 858 | 8.918202 | AAGTTTATCACACTTGAAATACTCCA | 57.082 | 30.769 | 0.00 | 0.00 | 34.61 | 3.86 |
860 | 867 | 9.725019 | ATCTGTGATTAAGTTTATCACACTTGA | 57.275 | 29.630 | 26.01 | 22.32 | 46.53 | 3.02 |
965 | 1004 | 2.364448 | GAGGAAGAGAGGGGGCGT | 60.364 | 66.667 | 0.00 | 0.00 | 0.00 | 5.68 |
1077 | 1116 | 1.522569 | GAAGAGACGATGGGGTGGG | 59.477 | 63.158 | 0.00 | 0.00 | 0.00 | 4.61 |
1143 | 1297 | 2.584608 | GGTGGGAGGATGTGACCG | 59.415 | 66.667 | 0.00 | 0.00 | 34.73 | 4.79 |
1442 | 1596 | 0.446222 | CGAAACTGCCGGTTACATGG | 59.554 | 55.000 | 1.90 | 0.00 | 37.12 | 3.66 |
1569 | 1723 | 7.928706 | AGGTTCTTTTCCTCTCGATATATGTTG | 59.071 | 37.037 | 0.00 | 0.00 | 0.00 | 3.33 |
1643 | 1797 | 6.747414 | ATGCTAAGATATACCAACACAGGA | 57.253 | 37.500 | 0.00 | 0.00 | 0.00 | 3.86 |
1675 | 1829 | 7.144722 | TCAACACCAAGCTTAAGATATTGTG | 57.855 | 36.000 | 6.67 | 10.63 | 0.00 | 3.33 |
1713 | 1867 | 0.474184 | ACAGGCTGCCAGTAAACAGT | 59.526 | 50.000 | 22.65 | 3.09 | 36.26 | 3.55 |
2057 | 2213 | 2.289694 | ACCATTACGTTCTTCTGCAGCT | 60.290 | 45.455 | 9.47 | 0.00 | 0.00 | 4.24 |
2113 | 2269 | 2.679059 | GCAGCAAGCTGATCTGTCCTAA | 60.679 | 50.000 | 25.03 | 0.00 | 46.30 | 2.69 |
2150 | 2306 | 7.944554 | CAGATGGGAAATAAATGGTATACCTGT | 59.055 | 37.037 | 22.41 | 8.84 | 36.82 | 4.00 |
2269 | 2425 | 7.093421 | TGCATGAGAAAAATGTAAATCCCATGA | 60.093 | 33.333 | 0.00 | 0.00 | 31.99 | 3.07 |
2282 | 2438 | 1.135199 | CGCTGGCTGCATGAGAAAAAT | 60.135 | 47.619 | 16.76 | 0.00 | 43.06 | 1.82 |
2310 | 2466 | 1.421268 | TCTGCAATGGTCCTGTTGAGT | 59.579 | 47.619 | 10.59 | 0.00 | 0.00 | 3.41 |
2362 | 2518 | 0.889186 | GTTCAACACCCTGTGGCGAT | 60.889 | 55.000 | 0.00 | 0.00 | 37.94 | 4.58 |
2451 | 2607 | 4.338118 | TGTGGCCATTTCCGAAATAAGATC | 59.662 | 41.667 | 9.72 | 0.00 | 0.00 | 2.75 |
2504 | 2660 | 5.085920 | ACCAATTCCAAATCACTGATTCCA | 58.914 | 37.500 | 4.70 | 0.00 | 30.29 | 3.53 |
2511 | 2667 | 4.482990 | ACCAAGACCAATTCCAAATCACT | 58.517 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
2746 | 2903 | 7.686438 | ATGACAGTTCATGTGTTTATAGCAA | 57.314 | 32.000 | 0.00 | 0.00 | 44.17 | 3.91 |
2755 | 2912 | 7.161404 | ACAGTTGTATATGACAGTTCATGTGT | 58.839 | 34.615 | 0.00 | 0.00 | 44.17 | 3.72 |
2877 | 3034 | 9.125026 | GATAGTGTTTCATCTTTTGGATATGGT | 57.875 | 33.333 | 0.00 | 0.00 | 32.64 | 3.55 |
2914 | 3071 | 1.411041 | AGCCCATTCGGTCCTAGTAC | 58.589 | 55.000 | 0.00 | 0.00 | 0.00 | 2.73 |
2952 | 3109 | 2.124411 | ACCTTCACACCACTAACAGGT | 58.876 | 47.619 | 0.00 | 0.00 | 40.85 | 4.00 |
3041 | 3198 | 8.050778 | TGGACCTGTAAAACAAGCAATTATAG | 57.949 | 34.615 | 0.00 | 0.00 | 0.00 | 1.31 |
3104 | 3261 | 6.496144 | AACCTTTACAAGTTCTCACCTAGT | 57.504 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
3118 | 3275 | 9.528489 | AATGGAGAATAAGCTAAAACCTTTACA | 57.472 | 29.630 | 0.00 | 0.00 | 0.00 | 2.41 |
3388 | 3545 | 5.247564 | TGGGAGAATTCTTCCTCGAAACTAA | 59.752 | 40.000 | 29.37 | 6.92 | 42.41 | 2.24 |
3530 | 3687 | 0.871722 | GCAAATTTTGGAAACGCCCC | 59.128 | 50.000 | 10.96 | 0.00 | 34.97 | 5.80 |
3539 | 3696 | 8.782144 | AGTTTATTTACCACATGCAAATTTTGG | 58.218 | 29.630 | 10.96 | 4.60 | 0.00 | 3.28 |
3686 | 3845 | 6.569610 | CGGCTGTCAAGGTAAAACAACATAAT | 60.570 | 38.462 | 0.00 | 0.00 | 0.00 | 1.28 |
4032 | 4192 | 1.797964 | CGCGAATTACAAAAGGCTCG | 58.202 | 50.000 | 0.00 | 0.00 | 0.00 | 5.03 |
4049 | 4209 | 3.374058 | TGAAAAAGGTATAAGAGCAGCGC | 59.626 | 43.478 | 0.00 | 0.00 | 0.00 | 5.92 |
4050 | 4210 | 5.741388 | ATGAAAAAGGTATAAGAGCAGCG | 57.259 | 39.130 | 0.00 | 0.00 | 0.00 | 5.18 |
4207 | 4367 | 6.317857 | GCTGGTCACATTTTCTTCTGATAAC | 58.682 | 40.000 | 0.00 | 0.00 | 0.00 | 1.89 |
4371 | 4539 | 4.641989 | CAGCCACTAGCCACTAATCAAATT | 59.358 | 41.667 | 0.00 | 0.00 | 45.47 | 1.82 |
4394 | 4562 | 1.789078 | CTTATGGCGGGTGCAGCATC | 61.789 | 60.000 | 19.06 | 8.14 | 45.35 | 3.91 |
4494 | 4662 | 7.704899 | ACTGGAAAAGGAAAACAAGTTATTTCG | 59.295 | 33.333 | 7.04 | 0.00 | 36.60 | 3.46 |
4635 | 4803 | 8.037758 | CAGGACACTCAAAAGTCTGAATATAGT | 58.962 | 37.037 | 0.00 | 0.00 | 35.18 | 2.12 |
5186 | 5371 | 4.340950 | CCTTAGCTTCAACAAGTTCCCAAA | 59.659 | 41.667 | 0.00 | 0.00 | 31.45 | 3.28 |
5202 | 5387 | 9.167311 | CAGAATGAGTTAACAATAACCTTAGCT | 57.833 | 33.333 | 8.61 | 0.00 | 41.98 | 3.32 |
5344 | 5529 | 8.675705 | AAAGAACATAAAATTGTGAAAAGGGG | 57.324 | 30.769 | 0.00 | 0.00 | 0.00 | 4.79 |
5500 | 5686 | 3.159213 | AGTTGCTGGACATGGAATCAA | 57.841 | 42.857 | 0.00 | 0.00 | 0.00 | 2.57 |
5505 | 5691 | 2.637382 | TCAACTAGTTGCTGGACATGGA | 59.363 | 45.455 | 27.49 | 6.49 | 40.24 | 3.41 |
5605 | 5791 | 5.539955 | AGAAATTACAACCCAGCTTCATTGT | 59.460 | 36.000 | 10.25 | 10.25 | 38.72 | 2.71 |
5613 | 5799 | 3.938963 | TGATCGAGAAATTACAACCCAGC | 59.061 | 43.478 | 0.00 | 0.00 | 0.00 | 4.85 |
5683 | 5869 | 5.440685 | CCAACGAACACAGTTTCAAGATAC | 58.559 | 41.667 | 0.00 | 0.00 | 0.00 | 2.24 |
5830 | 6026 | 8.072321 | TCACAGTTAGCTGAATTCTATCTTCT | 57.928 | 34.615 | 14.09 | 0.00 | 45.28 | 2.85 |
6091 | 6289 | 5.994887 | TCATTGCACGTGTTTAGTTACTT | 57.005 | 34.783 | 18.38 | 0.00 | 0.00 | 2.24 |
6129 | 6327 | 3.496337 | CCTCCTGAATAGCATGCTGATGT | 60.496 | 47.826 | 30.42 | 11.98 | 31.50 | 3.06 |
6155 | 6353 | 5.505654 | GCTGTAAATTATGAATCACCCACCG | 60.506 | 44.000 | 0.00 | 0.00 | 0.00 | 4.94 |
6168 | 6366 | 4.210331 | CCTCCAGGCTTGCTGTAAATTAT | 58.790 | 43.478 | 0.00 | 0.00 | 0.00 | 1.28 |
6186 | 6384 | 4.154195 | CAGCACAACACAACTAATACCTCC | 59.846 | 45.833 | 0.00 | 0.00 | 0.00 | 4.30 |
6188 | 6386 | 3.502211 | GCAGCACAACACAACTAATACCT | 59.498 | 43.478 | 0.00 | 0.00 | 0.00 | 3.08 |
6256 | 6454 | 3.938963 | GCTGATCCAAAACATCCTAACGA | 59.061 | 43.478 | 0.00 | 0.00 | 0.00 | 3.85 |
6257 | 6455 | 3.065371 | GGCTGATCCAAAACATCCTAACG | 59.935 | 47.826 | 0.00 | 0.00 | 34.01 | 3.18 |
6291 | 6489 | 8.322906 | TCACAACATCTCCACTAACATAAAAG | 57.677 | 34.615 | 0.00 | 0.00 | 0.00 | 2.27 |
6365 | 6563 | 4.660789 | AGAAGCAAGCAGTTGACAAATT | 57.339 | 36.364 | 0.00 | 0.00 | 35.46 | 1.82 |
6394 | 6592 | 9.937175 | GATTTGCTGGAGTAGTTTATGAAATAC | 57.063 | 33.333 | 0.00 | 0.00 | 36.76 | 1.89 |
6427 | 6626 | 6.438763 | CCAAACACAGGATCAAGTTAAGAAC | 58.561 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
6460 | 6659 | 2.373169 | AGGAAGCATGACCTGTTGAAGA | 59.627 | 45.455 | 0.00 | 0.00 | 34.99 | 2.87 |
6462 | 6661 | 2.507484 | CAGGAAGCATGACCTGTTGAA | 58.493 | 47.619 | 19.14 | 0.00 | 45.82 | 2.69 |
6728 | 7011 | 2.423577 | GGAGGAACGTAAAGCATGTGT | 58.576 | 47.619 | 0.00 | 0.00 | 0.00 | 3.72 |
6779 | 7062 | 8.167605 | TGTTATTTTAGGTTCAACGGATTCAA | 57.832 | 30.769 | 0.00 | 0.00 | 0.00 | 2.69 |
6836 | 7205 | 4.868171 | CGTATTTTCCGAGGATCTGTTTCA | 59.132 | 41.667 | 0.00 | 0.00 | 0.00 | 2.69 |
6843 | 7212 | 4.386049 | CAGTATGCGTATTTTCCGAGGATC | 59.614 | 45.833 | 0.00 | 0.00 | 0.00 | 3.36 |
6948 | 7317 | 2.880890 | GTGCTTCCTGCTCAGAGAAAAA | 59.119 | 45.455 | 0.00 | 0.00 | 43.37 | 1.94 |
7106 | 7475 | 4.330074 | GGTCGACCATATCAAACTTCACAG | 59.670 | 45.833 | 29.75 | 0.00 | 35.64 | 3.66 |
7264 | 7641 | 2.907407 | GGCAAATAGGGAGGGCGC | 60.907 | 66.667 | 0.00 | 0.00 | 0.00 | 6.53 |
7298 | 7675 | 2.257894 | GACATGAGAACTCACTCTGCG | 58.742 | 52.381 | 6.67 | 0.00 | 43.11 | 5.18 |
7323 | 8047 | 1.613437 | CTCTTTGTTCCCCGCACAAAT | 59.387 | 47.619 | 0.35 | 0.00 | 41.99 | 2.32 |
7324 | 8048 | 1.028905 | CTCTTTGTTCCCCGCACAAA | 58.971 | 50.000 | 0.11 | 0.11 | 40.93 | 2.83 |
7327 | 8051 | 0.534203 | TGTCTCTTTGTTCCCCGCAC | 60.534 | 55.000 | 0.00 | 0.00 | 0.00 | 5.34 |
7340 | 8064 | 5.123502 | GCAATCATCAACTGTGAATGTCTCT | 59.876 | 40.000 | 3.49 | 0.00 | 37.30 | 3.10 |
7353 | 8077 | 5.693104 | TCTCTTTTTGCAAGCAATCATCAAC | 59.307 | 36.000 | 8.46 | 0.00 | 35.70 | 3.18 |
7438 | 8220 | 3.389329 | TGCAAAGGAACCTATGGCAAAAA | 59.611 | 39.130 | 10.14 | 0.00 | 0.00 | 1.94 |
7473 | 8255 | 4.206375 | TCAAGTGCAATGAAAACAGAGGA | 58.794 | 39.130 | 1.14 | 0.00 | 0.00 | 3.71 |
7476 | 8258 | 8.980610 | CAAAATATCAAGTGCAATGAAAACAGA | 58.019 | 29.630 | 7.46 | 0.00 | 0.00 | 3.41 |
7507 | 8289 | 6.226787 | CAAACTACAGCTATCTAGGGAATGG | 58.773 | 44.000 | 0.00 | 0.00 | 0.00 | 3.16 |
7512 | 8294 | 4.202264 | CCACCAAACTACAGCTATCTAGGG | 60.202 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
7534 | 8316 | 6.904463 | TTACCAAACCAAACTAGGAATTCC | 57.096 | 37.500 | 17.31 | 17.31 | 0.00 | 3.01 |
7535 | 8317 | 7.718525 | TGTTTACCAAACCAAACTAGGAATTC | 58.281 | 34.615 | 0.00 | 0.00 | 40.67 | 2.17 |
7536 | 8318 | 7.663043 | TGTTTACCAAACCAAACTAGGAATT | 57.337 | 32.000 | 0.00 | 0.00 | 40.67 | 2.17 |
7537 | 8319 | 7.663043 | TTGTTTACCAAACCAAACTAGGAAT | 57.337 | 32.000 | 0.00 | 0.00 | 40.67 | 3.01 |
7538 | 8320 | 7.663043 | ATTGTTTACCAAACCAAACTAGGAA | 57.337 | 32.000 | 0.00 | 0.00 | 40.67 | 3.36 |
7539 | 8321 | 7.418025 | CCAATTGTTTACCAAACCAAACTAGGA | 60.418 | 37.037 | 4.43 | 0.00 | 40.67 | 2.94 |
7540 | 8322 | 6.704050 | CCAATTGTTTACCAAACCAAACTAGG | 59.296 | 38.462 | 4.43 | 0.00 | 40.67 | 3.02 |
7541 | 8323 | 7.269316 | ACCAATTGTTTACCAAACCAAACTAG | 58.731 | 34.615 | 4.43 | 0.00 | 40.67 | 2.57 |
7542 | 8324 | 7.184067 | ACCAATTGTTTACCAAACCAAACTA | 57.816 | 32.000 | 4.43 | 0.00 | 40.67 | 2.24 |
7543 | 8325 | 6.056090 | ACCAATTGTTTACCAAACCAAACT | 57.944 | 33.333 | 4.43 | 0.00 | 40.67 | 2.66 |
7544 | 8326 | 6.745159 | AACCAATTGTTTACCAAACCAAAC | 57.255 | 33.333 | 4.43 | 0.00 | 40.67 | 2.93 |
7545 | 8327 | 8.265055 | TGATAACCAATTGTTTACCAAACCAAA | 58.735 | 29.630 | 4.43 | 0.00 | 40.67 | 3.28 |
7546 | 8328 | 7.792032 | TGATAACCAATTGTTTACCAAACCAA | 58.208 | 30.769 | 4.43 | 0.00 | 40.67 | 3.67 |
7547 | 8329 | 7.361457 | TGATAACCAATTGTTTACCAAACCA | 57.639 | 32.000 | 4.43 | 0.00 | 40.67 | 3.67 |
7548 | 8330 | 8.078959 | GTTGATAACCAATTGTTTACCAAACC | 57.921 | 34.615 | 4.25 | 0.00 | 37.56 | 3.27 |
7573 | 8368 | 2.357593 | ATTTATGCCAGGCTCCGGGG | 62.358 | 60.000 | 14.15 | 0.00 | 0.00 | 5.73 |
7576 | 8371 | 1.334869 | GTGAATTTATGCCAGGCTCCG | 59.665 | 52.381 | 14.15 | 0.00 | 0.00 | 4.63 |
7582 | 8377 | 1.405105 | CACGGGGTGAATTTATGCCAG | 59.595 | 52.381 | 0.00 | 0.00 | 35.23 | 4.85 |
7657 | 8828 | 3.880846 | CGGGCATGGAAAGCGAGC | 61.881 | 66.667 | 0.00 | 0.00 | 0.00 | 5.03 |
7663 | 8834 | 1.376683 | CGGAAGACGGGCATGGAAA | 60.377 | 57.895 | 0.00 | 0.00 | 39.42 | 3.13 |
7664 | 8835 | 2.238847 | CTCGGAAGACGGGCATGGAA | 62.239 | 60.000 | 0.00 | 0.00 | 44.45 | 3.53 |
7665 | 8836 | 2.682136 | TCGGAAGACGGGCATGGA | 60.682 | 61.111 | 0.00 | 0.00 | 44.45 | 3.41 |
7666 | 8837 | 2.202932 | CTCGGAAGACGGGCATGG | 60.203 | 66.667 | 0.00 | 0.00 | 44.45 | 3.66 |
7667 | 8838 | 1.227089 | CTCTCGGAAGACGGGCATG | 60.227 | 63.158 | 0.00 | 0.00 | 44.66 | 4.06 |
7668 | 8839 | 0.757188 | ATCTCTCGGAAGACGGGCAT | 60.757 | 55.000 | 0.00 | 0.00 | 44.66 | 4.40 |
7669 | 8840 | 0.970937 | AATCTCTCGGAAGACGGGCA | 60.971 | 55.000 | 0.00 | 0.00 | 44.66 | 5.36 |
7670 | 8841 | 0.175989 | AAATCTCTCGGAAGACGGGC | 59.824 | 55.000 | 0.00 | 0.00 | 44.66 | 6.13 |
7672 | 8843 | 1.476891 | TCCAAATCTCTCGGAAGACGG | 59.523 | 52.381 | 0.00 | 0.00 | 44.45 | 4.79 |
7673 | 8844 | 2.941453 | TCCAAATCTCTCGGAAGACG | 57.059 | 50.000 | 0.00 | 0.00 | 46.11 | 4.18 |
7674 | 8845 | 4.759782 | TCATTCCAAATCTCTCGGAAGAC | 58.240 | 43.478 | 0.00 | 0.00 | 41.91 | 3.01 |
7675 | 8846 | 5.187772 | TCTTCATTCCAAATCTCTCGGAAGA | 59.812 | 40.000 | 0.00 | 0.00 | 41.91 | 2.87 |
7676 | 8847 | 5.423015 | TCTTCATTCCAAATCTCTCGGAAG | 58.577 | 41.667 | 0.00 | 0.00 | 41.91 | 3.46 |
7677 | 8848 | 5.420725 | TCTTCATTCCAAATCTCTCGGAA | 57.579 | 39.130 | 0.00 | 0.00 | 42.77 | 4.30 |
7678 | 8849 | 5.620738 | ATCTTCATTCCAAATCTCTCGGA | 57.379 | 39.130 | 0.00 | 0.00 | 0.00 | 4.55 |
7679 | 8850 | 6.520272 | ACTATCTTCATTCCAAATCTCTCGG | 58.480 | 40.000 | 0.00 | 0.00 | 0.00 | 4.63 |
7680 | 8851 | 7.432869 | AGACTATCTTCATTCCAAATCTCTCG | 58.567 | 38.462 | 0.00 | 0.00 | 0.00 | 4.04 |
7696 | 8867 | 9.144298 | TGTAGATATTTTCCGGAAGACTATCTT | 57.856 | 33.333 | 30.09 | 21.14 | 39.87 | 2.40 |
7697 | 8868 | 8.707796 | TGTAGATATTTTCCGGAAGACTATCT | 57.292 | 34.615 | 28.99 | 28.99 | 0.00 | 1.98 |
7698 | 8869 | 9.930693 | ATTGTAGATATTTTCCGGAAGACTATC | 57.069 | 33.333 | 17.97 | 21.02 | 0.00 | 2.08 |
7699 | 8870 | 9.712305 | CATTGTAGATATTTTCCGGAAGACTAT | 57.288 | 33.333 | 17.97 | 14.61 | 0.00 | 2.12 |
7700 | 8871 | 7.656137 | GCATTGTAGATATTTTCCGGAAGACTA | 59.344 | 37.037 | 17.97 | 13.63 | 0.00 | 2.59 |
7701 | 8872 | 6.483640 | GCATTGTAGATATTTTCCGGAAGACT | 59.516 | 38.462 | 17.97 | 14.53 | 0.00 | 3.24 |
7702 | 8873 | 6.293462 | GGCATTGTAGATATTTTCCGGAAGAC | 60.293 | 42.308 | 17.97 | 8.29 | 0.00 | 3.01 |
7703 | 8874 | 5.763204 | GGCATTGTAGATATTTTCCGGAAGA | 59.237 | 40.000 | 17.97 | 14.11 | 0.00 | 2.87 |
7704 | 8875 | 5.530915 | TGGCATTGTAGATATTTTCCGGAAG | 59.469 | 40.000 | 17.97 | 1.83 | 0.00 | 3.46 |
7737 | 8908 | 5.745312 | TCTCTCTTCTGATGTTAGCCAAA | 57.255 | 39.130 | 0.00 | 0.00 | 0.00 | 3.28 |
7740 | 8911 | 4.343526 | TCCATCTCTCTTCTGATGTTAGCC | 59.656 | 45.833 | 0.00 | 0.00 | 38.59 | 3.93 |
7750 | 8921 | 4.163458 | ACTCTACGACTCCATCTCTCTTCT | 59.837 | 45.833 | 0.00 | 0.00 | 0.00 | 2.85 |
7768 | 8939 | 0.541063 | TTGGCCTCCACGACACTCTA | 60.541 | 55.000 | 3.32 | 0.00 | 30.78 | 2.43 |
7776 | 8947 | 1.817099 | GATGCTCTTGGCCTCCACG | 60.817 | 63.158 | 3.32 | 0.00 | 40.92 | 4.94 |
7778 | 8949 | 0.254178 | GAAGATGCTCTTGGCCTCCA | 59.746 | 55.000 | 3.32 | 0.00 | 36.73 | 3.86 |
7789 | 9123 | 2.455674 | TGTACTGCGTTGAAGATGCT | 57.544 | 45.000 | 0.00 | 0.00 | 41.04 | 3.79 |
7796 | 9130 | 1.459209 | CGCTTTGATGTACTGCGTTGA | 59.541 | 47.619 | 0.00 | 0.00 | 41.45 | 3.18 |
7822 | 9160 | 4.701956 | ATCCCGCAGTTCAAACATTTAG | 57.298 | 40.909 | 0.00 | 0.00 | 0.00 | 1.85 |
7836 | 9174 | 1.540267 | AAAAATGTCCGAATCCCGCA | 58.460 | 45.000 | 0.00 | 0.00 | 36.84 | 5.69 |
7861 | 9199 | 6.551736 | GGACATTTGATGTACCATGTTGTAC | 58.448 | 40.000 | 5.57 | 5.57 | 45.03 | 2.90 |
7866 | 9204 | 2.682856 | GCGGACATTTGATGTACCATGT | 59.317 | 45.455 | 0.00 | 0.00 | 45.03 | 3.21 |
7869 | 9207 | 2.027653 | TCTGCGGACATTTGATGTACCA | 60.028 | 45.455 | 0.00 | 0.00 | 45.03 | 3.25 |
7875 | 9213 | 1.825090 | TTGCTCTGCGGACATTTGAT | 58.175 | 45.000 | 0.00 | 0.00 | 0.00 | 2.57 |
7881 | 9219 | 1.078918 | CTGGATTGCTCTGCGGACA | 60.079 | 57.895 | 0.00 | 0.00 | 0.00 | 4.02 |
7883 | 9221 | 1.219124 | GACTGGATTGCTCTGCGGA | 59.781 | 57.895 | 0.00 | 0.00 | 0.00 | 5.54 |
7887 | 9225 | 1.203287 | TCAGACGACTGGATTGCTCTG | 59.797 | 52.381 | 14.76 | 0.72 | 43.60 | 3.35 |
7897 | 9235 | 2.455674 | TGTGGGATTTCAGACGACTG | 57.544 | 50.000 | 8.68 | 8.68 | 44.66 | 3.51 |
7899 | 9237 | 2.225727 | GGTTTGTGGGATTTCAGACGAC | 59.774 | 50.000 | 0.00 | 0.00 | 0.00 | 4.34 |
7901 | 9239 | 1.196808 | CGGTTTGTGGGATTTCAGACG | 59.803 | 52.381 | 0.00 | 0.00 | 0.00 | 4.18 |
7915 | 9253 | 2.747446 | CCTCAGGTTTACATCCGGTTTG | 59.253 | 50.000 | 0.00 | 3.17 | 0.00 | 2.93 |
7919 | 9257 | 3.343941 | TTTCCTCAGGTTTACATCCGG | 57.656 | 47.619 | 0.00 | 0.00 | 0.00 | 5.14 |
7924 | 9262 | 4.698304 | CCGCTAAATTTCCTCAGGTTTACA | 59.302 | 41.667 | 0.00 | 0.00 | 0.00 | 2.41 |
7925 | 9263 | 4.939439 | TCCGCTAAATTTCCTCAGGTTTAC | 59.061 | 41.667 | 0.00 | 0.00 | 0.00 | 2.01 |
7934 | 9272 | 2.758979 | TCTCGACTCCGCTAAATTTCCT | 59.241 | 45.455 | 0.00 | 0.00 | 35.37 | 3.36 |
7937 | 9275 | 3.056749 | ACTGTCTCGACTCCGCTAAATTT | 60.057 | 43.478 | 0.00 | 0.00 | 35.37 | 1.82 |
7939 | 9277 | 2.093106 | ACTGTCTCGACTCCGCTAAAT | 58.907 | 47.619 | 0.00 | 0.00 | 35.37 | 1.40 |
7943 | 9281 | 2.041686 | GGACTGTCTCGACTCCGCT | 61.042 | 63.158 | 7.85 | 0.00 | 35.37 | 5.52 |
7945 | 9283 | 1.797441 | CAGGACTGTCTCGACTCCG | 59.203 | 63.158 | 7.85 | 0.00 | 32.65 | 4.63 |
7946 | 9284 | 0.963355 | AGCAGGACTGTCTCGACTCC | 60.963 | 60.000 | 7.85 | 0.00 | 0.00 | 3.85 |
7948 | 9286 | 0.600557 | CAAGCAGGACTGTCTCGACT | 59.399 | 55.000 | 7.85 | 0.00 | 0.00 | 4.18 |
7949 | 9287 | 0.389166 | CCAAGCAGGACTGTCTCGAC | 60.389 | 60.000 | 7.85 | 0.00 | 41.22 | 4.20 |
7950 | 9288 | 1.967535 | CCAAGCAGGACTGTCTCGA | 59.032 | 57.895 | 7.85 | 0.00 | 41.22 | 4.04 |
7951 | 9289 | 1.739562 | GCCAAGCAGGACTGTCTCG | 60.740 | 63.158 | 7.85 | 0.38 | 41.22 | 4.04 |
7952 | 9290 | 1.376553 | GGCCAAGCAGGACTGTCTC | 60.377 | 63.158 | 7.85 | 0.00 | 44.70 | 3.36 |
7953 | 9291 | 2.753029 | GGCCAAGCAGGACTGTCT | 59.247 | 61.111 | 7.85 | 0.00 | 44.70 | 3.41 |
7961 | 9301 | 0.820891 | AACTGACAGTGGCCAAGCAG | 60.821 | 55.000 | 7.24 | 15.05 | 0.00 | 4.24 |
7962 | 9302 | 0.819259 | GAACTGACAGTGGCCAAGCA | 60.819 | 55.000 | 7.24 | 2.04 | 0.00 | 3.91 |
7975 | 9315 | 8.277490 | ACTATAAGAACATGTAGTCGAACTGA | 57.723 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
7976 | 9316 | 7.644551 | GGACTATAAGAACATGTAGTCGAACTG | 59.355 | 40.741 | 14.84 | 1.65 | 42.36 | 3.16 |
7977 | 9317 | 7.338703 | TGGACTATAAGAACATGTAGTCGAACT | 59.661 | 37.037 | 14.84 | 0.00 | 42.36 | 3.01 |
7978 | 9318 | 7.478322 | TGGACTATAAGAACATGTAGTCGAAC | 58.522 | 38.462 | 14.84 | 5.50 | 42.36 | 3.95 |
7979 | 9319 | 7.634671 | TGGACTATAAGAACATGTAGTCGAA | 57.365 | 36.000 | 14.84 | 6.25 | 42.36 | 3.71 |
7981 | 9321 | 7.859613 | CATGGACTATAAGAACATGTAGTCG | 57.140 | 40.000 | 14.84 | 2.20 | 42.36 | 4.18 |
7987 | 9327 | 5.237996 | CAGGCACATGGACTATAAGAACATG | 59.762 | 44.000 | 0.00 | 0.00 | 43.29 | 3.21 |
7988 | 9328 | 5.371526 | CAGGCACATGGACTATAAGAACAT | 58.628 | 41.667 | 0.00 | 0.00 | 29.10 | 2.71 |
7989 | 9329 | 4.384098 | CCAGGCACATGGACTATAAGAACA | 60.384 | 45.833 | 0.00 | 0.00 | 43.57 | 3.18 |
7990 | 9330 | 4.130118 | CCAGGCACATGGACTATAAGAAC | 58.870 | 47.826 | 0.00 | 0.00 | 43.57 | 3.01 |
7991 | 9331 | 3.433598 | GCCAGGCACATGGACTATAAGAA | 60.434 | 47.826 | 6.55 | 0.00 | 43.57 | 2.52 |
7992 | 9332 | 2.104792 | GCCAGGCACATGGACTATAAGA | 59.895 | 50.000 | 6.55 | 0.00 | 43.57 | 2.10 |
7993 | 9333 | 2.498167 | GCCAGGCACATGGACTATAAG | 58.502 | 52.381 | 6.55 | 0.00 | 43.57 | 1.73 |
7994 | 9334 | 1.142870 | GGCCAGGCACATGGACTATAA | 59.857 | 52.381 | 15.19 | 0.00 | 45.80 | 0.98 |
7995 | 9335 | 0.764890 | GGCCAGGCACATGGACTATA | 59.235 | 55.000 | 15.19 | 0.00 | 45.80 | 1.31 |
7996 | 9336 | 1.533711 | GGCCAGGCACATGGACTAT | 59.466 | 57.895 | 15.19 | 0.00 | 45.80 | 2.12 |
8018 | 9358 | 2.114670 | ATCAAATCCGGCCAGCACG | 61.115 | 57.895 | 2.24 | 0.00 | 0.00 | 5.34 |
8019 | 9359 | 1.434696 | CATCAAATCCGGCCAGCAC | 59.565 | 57.895 | 2.24 | 0.00 | 0.00 | 4.40 |
8045 | 9410 | 5.124297 | CACTCATCCAACTGTATGCATCAAA | 59.876 | 40.000 | 0.19 | 0.00 | 0.00 | 2.69 |
8058 | 9423 | 3.131400 | GGTAGGAGAGTCACTCATCCAAC | 59.869 | 52.174 | 19.59 | 7.22 | 46.54 | 3.77 |
8065 | 9430 | 2.161030 | ACAACGGTAGGAGAGTCACTC | 58.839 | 52.381 | 0.00 | 0.00 | 44.24 | 3.51 |
8068 | 9433 | 2.313317 | ACAACAACGGTAGGAGAGTCA | 58.687 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
8070 | 9435 | 2.288030 | CGAACAACAACGGTAGGAGAGT | 60.288 | 50.000 | 0.00 | 0.00 | 0.00 | 3.24 |
8071 | 9436 | 2.288030 | ACGAACAACAACGGTAGGAGAG | 60.288 | 50.000 | 0.00 | 0.00 | 0.00 | 3.20 |
8076 | 9441 | 1.523934 | GTCCACGAACAACAACGGTAG | 59.476 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
8077 | 9442 | 1.134877 | TGTCCACGAACAACAACGGTA | 60.135 | 47.619 | 0.00 | 0.00 | 0.00 | 4.02 |
8078 | 9443 | 0.391395 | TGTCCACGAACAACAACGGT | 60.391 | 50.000 | 0.00 | 0.00 | 0.00 | 4.83 |
8089 | 9454 | 2.002509 | TTCGACGGTTGTGTCCACGA | 62.003 | 55.000 | 0.00 | 0.00 | 35.40 | 4.35 |
8184 | 9549 | 8.358148 | CGAAGCCAAATTATAACTACTCTCCTA | 58.642 | 37.037 | 0.00 | 0.00 | 0.00 | 2.94 |
8268 | 9633 | 4.864704 | AATGTTTTTCCATAGCAACGGT | 57.135 | 36.364 | 0.00 | 0.00 | 0.00 | 4.83 |
8269 | 9634 | 6.616947 | TCTAAATGTTTTTCCATAGCAACGG | 58.383 | 36.000 | 0.00 | 0.00 | 0.00 | 4.44 |
8270 | 9635 | 7.807907 | ACTTCTAAATGTTTTTCCATAGCAACG | 59.192 | 33.333 | 0.00 | 0.00 | 0.00 | 4.10 |
8285 | 9651 | 8.947115 | GGCACACTTTAATCTACTTCTAAATGT | 58.053 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
8310 | 10590 | 7.789202 | TCCCTCAAAGATCTTATATCTCTGG | 57.211 | 40.000 | 8.75 | 2.42 | 0.00 | 3.86 |
8317 | 10597 | 9.309224 | TCGTCAATATCCCTCAAAGATCTTATA | 57.691 | 33.333 | 8.75 | 2.17 | 0.00 | 0.98 |
8318 | 10598 | 8.195165 | TCGTCAATATCCCTCAAAGATCTTAT | 57.805 | 34.615 | 8.75 | 0.00 | 0.00 | 1.73 |
8326 | 10606 | 3.196039 | TCGGTTCGTCAATATCCCTCAAA | 59.804 | 43.478 | 0.00 | 0.00 | 0.00 | 2.69 |
8327 | 10607 | 2.761767 | TCGGTTCGTCAATATCCCTCAA | 59.238 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
8331 | 10611 | 1.202486 | TGCTCGGTTCGTCAATATCCC | 60.202 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
8360 | 10640 | 8.641498 | ATTTTGGAACTGAGAAAGTACATCAT | 57.359 | 30.769 | 0.00 | 0.00 | 38.56 | 2.45 |
8375 | 10655 | 9.588096 | ACCTAAGATTTCAAGTATTTTGGAACT | 57.412 | 29.630 | 0.00 | 0.00 | 0.00 | 3.01 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.