Multiple sequence alignment - TraesCS4D01G057100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G057100 chr4D 100.000 7455 0 0 1 7455 32230091 32237545 0.000000e+00 13767
1 TraesCS4D01G057100 chr4A 93.459 6192 277 66 597 6703 570472298 570466150 0.000000e+00 9073
2 TraesCS4D01G057100 chr4A 89.641 251 15 6 6822 7064 570466146 570465899 7.260000e-80 309
3 TraesCS4D01G057100 chr4A 83.094 278 30 7 7189 7455 570465878 570465607 3.480000e-58 237
4 TraesCS4D01G057100 chr4B 91.240 3904 224 62 1 3840 46614275 46618124 0.000000e+00 5206
5 TraesCS4D01G057100 chr4B 92.926 1866 84 18 4238 6095 46618846 46620671 0.000000e+00 2671
6 TraesCS4D01G057100 chr4B 93.769 658 21 7 6078 6724 46620852 46621500 0.000000e+00 970
7 TraesCS4D01G057100 chr4B 93.995 383 20 2 3844 4224 46618320 46618701 1.800000e-160 577


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G057100 chr4D 32230091 32237545 7454 False 13767.000000 13767 100.000000 1 7455 1 chr4D.!!$F1 7454
1 TraesCS4D01G057100 chr4A 570465607 570472298 6691 True 3206.333333 9073 88.731333 597 7455 3 chr4A.!!$R1 6858
2 TraesCS4D01G057100 chr4B 46614275 46621500 7225 False 2356.000000 5206 92.982500 1 6724 4 chr4B.!!$F1 6723

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
860 879 0.105709 CTCTCTTCCTCCTCTCCCCC 60.106 65.0 0.00 0.0 0.00 5.40 F
1287 1313 0.736053 GGTTGGAAATGCGCCGATTA 59.264 50.0 4.18 0.0 0.00 1.75 F
2173 2207 0.179000 ACTAATCCAGGAAGCTGCCG 59.821 55.0 4.63 0.0 0.00 5.69 F
2305 2339 5.243060 GGTTCCAAGTTGGCTTAAATACACT 59.757 40.0 17.68 0.0 37.47 3.55 F
3650 3707 2.664402 AGGCAATGTGTTCCACTCTT 57.336 45.0 0.00 0.0 35.11 2.85 F
3714 3786 0.034337 TGTCACGCTGACCCCTTTAC 59.966 55.0 13.24 0.0 46.40 2.01 F
4818 5267 0.106819 TACGTCTCTAGGCTCCACCC 60.107 60.0 0.00 0.0 40.58 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1810 1844 1.066303 CGTGCAGGGTAAACAAAGCAA 59.934 47.619 0.00 0.0 33.37 3.91 R
2644 2692 1.270550 GTGCCCAGACAACAGAAATGG 59.729 52.381 0.00 0.0 0.00 3.16 R
3651 3708 1.959226 TTCACGTCGGCCAAGCTTC 60.959 57.895 2.24 0.0 0.00 3.86 R
3652 3709 2.110213 TTCACGTCGGCCAAGCTT 59.890 55.556 2.24 0.0 0.00 3.74 R
4573 4995 0.322975 CAGGGGGAACTCACTGACTG 59.677 60.000 0.00 0.0 32.86 3.51 R
5550 6008 1.006832 CTCCGGCGTTATTTGACAGG 58.993 55.000 6.01 0.0 0.00 4.00 R
6806 7474 0.322187 TTTTAGCCAAGACCTCCGCC 60.322 55.000 0.00 0.0 0.00 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 30 6.101650 TCTTCTACACCGATGCATATGATT 57.898 37.500 6.97 0.00 0.00 2.57
30 32 7.840931 TCTTCTACACCGATGCATATGATTAT 58.159 34.615 6.97 0.00 0.00 1.28
44 48 6.037940 GCATATGATTATGGACTGTATGCCTG 59.962 42.308 6.97 0.00 37.84 4.85
46 50 3.716353 TGATTATGGACTGTATGCCTGGT 59.284 43.478 0.00 0.00 0.00 4.00
59 63 0.611062 GCCTGGTAAACCCCCAAGAC 60.611 60.000 0.00 0.00 34.29 3.01
66 70 1.955458 AAACCCCCAAGACCCAGCAA 61.955 55.000 0.00 0.00 0.00 3.91
67 71 2.283173 CCCCCAAGACCCAGCAAC 60.283 66.667 0.00 0.00 0.00 4.17
70 74 2.270986 CCCAAGACCCAGCAACAGC 61.271 63.158 0.00 0.00 0.00 4.40
73 77 1.102809 CAAGACCCAGCAACAGCACA 61.103 55.000 0.00 0.00 0.00 4.57
74 78 0.178981 AAGACCCAGCAACAGCACAT 60.179 50.000 0.00 0.00 0.00 3.21
93 97 4.899239 GTCGAGCCATCCAGCCGG 62.899 72.222 0.00 0.00 0.00 6.13
103 107 2.824041 CCAGCCGGTGGTGTATGC 60.824 66.667 8.56 0.00 42.17 3.14
135 139 1.950909 CTAGAGGTCAAGCGGAGTAGG 59.049 57.143 0.00 0.00 0.00 3.18
150 154 2.099263 GAGTAGGTACGAAGCAGCATCA 59.901 50.000 0.00 0.00 0.00 3.07
152 156 0.898320 AGGTACGAAGCAGCATCACT 59.102 50.000 0.00 0.00 0.00 3.41
154 158 2.076863 GGTACGAAGCAGCATCACTTT 58.923 47.619 0.00 0.00 0.00 2.66
158 162 1.463034 CGAAGCAGCATCACTTTGACG 60.463 52.381 0.00 0.00 30.10 4.35
166 171 5.049828 CAGCATCACTTTGACGACCATATA 58.950 41.667 0.00 0.00 0.00 0.86
169 174 5.696270 GCATCACTTTGACGACCATATATCA 59.304 40.000 0.00 0.00 0.00 2.15
175 180 3.146847 TGACGACCATATATCACGAGCT 58.853 45.455 8.88 0.00 0.00 4.09
184 189 5.393569 CCATATATCACGAGCTAGGACCTTG 60.394 48.000 0.00 0.00 0.00 3.61
185 190 0.461961 ATCACGAGCTAGGACCTTGC 59.538 55.000 18.95 18.95 32.79 4.01
191 196 1.746991 GCTAGGACCTTGCTGCACC 60.747 63.158 19.25 0.00 30.22 5.01
193 198 1.888436 CTAGGACCTTGCTGCACCGA 61.888 60.000 0.00 0.00 0.00 4.69
204 209 2.219325 CTGCACCGAGGAGTGAGACC 62.219 65.000 0.00 0.00 40.34 3.85
228 233 2.711542 GGGTGTACCACATCCTTTGAG 58.288 52.381 3.11 0.00 45.89 3.02
245 250 2.338809 TGAGTGGAGAAATGAGGGTGT 58.661 47.619 0.00 0.00 0.00 4.16
247 252 2.303022 GAGTGGAGAAATGAGGGTGTCA 59.697 50.000 0.00 0.00 40.38 3.58
250 255 1.275291 GGAGAAATGAGGGTGTCACGA 59.725 52.381 0.00 0.00 38.28 4.35
253 258 2.303022 AGAAATGAGGGTGTCACGACAT 59.697 45.455 2.72 0.20 43.97 3.06
261 266 1.660607 GGTGTCACGACATGTATGCAG 59.339 52.381 0.00 0.00 43.97 4.41
280 285 1.136690 GACGATGCAAAGTCACGACA 58.863 50.000 16.85 0.00 37.34 4.35
292 297 1.469308 GTCACGACAAACCAAACCACA 59.531 47.619 0.00 0.00 0.00 4.17
314 319 3.674997 ACACACAACATAGCTCGGATTT 58.325 40.909 0.00 0.00 0.00 2.17
315 320 3.436704 ACACACAACATAGCTCGGATTTG 59.563 43.478 0.00 0.00 0.00 2.32
322 327 4.384056 ACATAGCTCGGATTTGAGAATGG 58.616 43.478 0.00 0.00 38.28 3.16
340 345 3.591196 TGGGCAAACATAAGCAACATC 57.409 42.857 0.00 0.00 0.00 3.06
341 346 3.164268 TGGGCAAACATAAGCAACATCT 58.836 40.909 0.00 0.00 0.00 2.90
353 358 3.073678 AGCAACATCTGTGCAACGAATA 58.926 40.909 0.00 0.00 42.39 1.75
356 361 4.378356 GCAACATCTGTGCAACGAATAAGA 60.378 41.667 0.00 0.00 42.39 2.10
374 379 0.674534 GAAGAGTCGTCACAGTGGGT 59.325 55.000 0.00 0.00 0.00 4.51
387 392 3.995636 ACAGTGGGTGATGACTAGGTAT 58.004 45.455 0.00 0.00 0.00 2.73
395 400 1.819903 GATGACTAGGTATCGCCCCTC 59.180 57.143 0.00 0.00 38.26 4.30
415 420 5.006746 CCCTCGACATGCTATTAAAGTGAAC 59.993 44.000 0.00 0.00 0.00 3.18
417 422 5.165676 TCGACATGCTATTAAAGTGAACGT 58.834 37.500 0.00 0.00 0.00 3.99
418 423 5.061684 TCGACATGCTATTAAAGTGAACGTG 59.938 40.000 0.00 0.00 0.00 4.49
421 426 5.123820 ACATGCTATTAAAGTGAACGTGCAT 59.876 36.000 0.00 0.00 38.87 3.96
423 428 5.389778 TGCTATTAAAGTGAACGTGCATTG 58.610 37.500 0.00 0.00 0.00 2.82
424 429 4.262976 GCTATTAAAGTGAACGTGCATTGC 59.737 41.667 0.00 0.46 0.00 3.56
425 430 3.699779 TTAAAGTGAACGTGCATTGCA 57.300 38.095 7.38 7.38 35.60 4.08
426 431 2.575694 AAAGTGAACGTGCATTGCAA 57.424 40.000 13.94 0.00 41.47 4.08
427 432 2.124011 AAGTGAACGTGCATTGCAAG 57.876 45.000 20.74 20.74 41.47 4.01
435 440 3.266541 CGTGCATTGCAAGTTCACTAA 57.733 42.857 13.94 0.00 41.47 2.24
439 444 6.029607 CGTGCATTGCAAGTTCACTAATTAT 58.970 36.000 13.94 0.00 41.47 1.28
450 455 5.231568 AGTTCACTAATTATCTTACGTGCGC 59.768 40.000 0.00 0.00 0.00 6.09
504 509 5.760253 GGGATGGTAAGACATACACAATCTG 59.240 44.000 0.00 0.00 36.14 2.90
507 512 7.552687 GGATGGTAAGACATACACAATCTGAAA 59.447 37.037 0.00 0.00 36.14 2.69
508 513 9.113838 GATGGTAAGACATACACAATCTGAAAT 57.886 33.333 0.00 0.00 36.14 2.17
550 555 6.978343 TCCATACATTTCGTTTCGAAGAAT 57.022 33.333 0.00 0.00 46.43 2.40
559 564 4.638304 TCGTTTCGAAGAATTCTTTCCCT 58.362 39.130 21.33 0.00 44.75 4.20
646 665 8.112016 AGAGAAACCTTAAGCATAAAGAAACC 57.888 34.615 0.00 0.00 0.00 3.27
654 673 8.079809 CCTTAAGCATAAAGAAACCGAGAAAAA 58.920 33.333 0.00 0.00 0.00 1.94
713 732 9.018582 CCAGAGAGAAAGACCAAGAAAATAAAT 57.981 33.333 0.00 0.00 0.00 1.40
760 779 0.872388 AATCCGGCGACACTTTGTTC 59.128 50.000 9.30 0.00 0.00 3.18
833 852 3.866582 CCCCCATCCGCACCTCTC 61.867 72.222 0.00 0.00 0.00 3.20
834 853 2.765807 CCCCATCCGCACCTCTCT 60.766 66.667 0.00 0.00 0.00 3.10
855 874 3.713764 CTCTCTCTCTCTCTTCCTCCTCT 59.286 52.174 0.00 0.00 0.00 3.69
858 877 1.850345 TCTCTCTCTTCCTCCTCTCCC 59.150 57.143 0.00 0.00 0.00 4.30
860 879 0.105709 CTCTCTTCCTCCTCTCCCCC 60.106 65.000 0.00 0.00 0.00 5.40
948 968 3.423154 CTTGTTCCCGAGTGCGCC 61.423 66.667 4.18 0.00 35.83 6.53
1244 1270 1.329599 GGTCGCGTTTGTTTCAAGTCT 59.670 47.619 5.77 0.00 0.00 3.24
1245 1271 2.363220 GTCGCGTTTGTTTCAAGTCTG 58.637 47.619 5.77 0.00 0.00 3.51
1287 1313 0.736053 GGTTGGAAATGCGCCGATTA 59.264 50.000 4.18 0.00 0.00 1.75
1290 1316 2.772568 TGGAAATGCGCCGATTATTG 57.227 45.000 4.18 0.00 0.00 1.90
1339 1365 2.049156 GGGAAAAGCGCTTGGTGC 60.049 61.111 25.80 19.29 39.59 5.01
1361 1387 1.388065 CGGCCCTTGTTGTTTGTCCA 61.388 55.000 0.00 0.00 0.00 4.02
1365 1391 2.545742 GCCCTTGTTGTTTGTCCATGTC 60.546 50.000 0.00 0.00 0.00 3.06
1368 1394 3.381272 CCTTGTTGTTTGTCCATGTCAGT 59.619 43.478 0.00 0.00 0.00 3.41
1369 1395 4.142182 CCTTGTTGTTTGTCCATGTCAGTT 60.142 41.667 0.00 0.00 0.00 3.16
1377 1403 4.097551 TGTCCATGTCAGTTTTGGATGA 57.902 40.909 0.00 0.00 41.37 2.92
1389 1415 7.010460 GTCAGTTTTGGATGAAACAGGAAAAAG 59.990 37.037 3.68 0.00 40.98 2.27
1429 1459 2.094675 ACAATTTGGAAGATCAGCGGG 58.905 47.619 0.78 0.00 0.00 6.13
1452 1482 4.849813 ATTCATGATCCTTCTGGTCACA 57.150 40.909 0.00 0.00 34.23 3.58
1453 1483 3.616956 TCATGATCCTTCTGGTCACAC 57.383 47.619 0.00 0.00 34.23 3.82
1561 1593 5.305386 TCTGTTCTTGACTGGAGAAGATTCA 59.695 40.000 0.00 0.00 34.05 2.57
1643 1677 3.639561 GTCCCACCCACTAATTGTTTGTT 59.360 43.478 0.00 0.00 0.00 2.83
1700 1734 5.375283 AAGGAAGGGGAATACTTTAGCTC 57.625 43.478 0.00 0.00 0.00 4.09
1732 1766 8.476447 AGGATTAAAAGTGGGAAAACGTTTTTA 58.524 29.630 25.86 13.57 34.34 1.52
1802 1836 3.130516 TCCCGATCGTGATATCCATTAGC 59.869 47.826 15.09 0.00 0.00 3.09
1803 1837 3.119137 CCCGATCGTGATATCCATTAGCA 60.119 47.826 15.09 0.00 0.00 3.49
1807 1841 6.364435 CCGATCGTGATATCCATTAGCATATG 59.636 42.308 15.09 0.00 0.00 1.78
1808 1842 6.364435 CGATCGTGATATCCATTAGCATATGG 59.636 42.308 7.03 10.08 45.34 2.74
1810 1844 6.946340 TCGTGATATCCATTAGCATATGGTT 58.054 36.000 13.49 10.21 44.48 3.67
1824 1858 4.629634 GCATATGGTTTGCTTTGTTTACCC 59.370 41.667 4.56 0.00 37.14 3.69
1908 1942 6.822442 TGACATCTGTTTCAGTAGTTACCAA 58.178 36.000 0.00 0.00 32.61 3.67
1955 1989 8.859090 ACACCTATTTGTTCAATCAAAGAATCA 58.141 29.630 0.00 0.00 40.00 2.57
1971 2005 9.559732 TCAAAGAATCAGAGTCTCATTTTTGTA 57.440 29.630 16.28 7.56 0.00 2.41
1983 2017 9.071276 AGTCTCATTTTTGTAGAATCATTGTGT 57.929 29.630 0.00 0.00 0.00 3.72
2173 2207 0.179000 ACTAATCCAGGAAGCTGCCG 59.821 55.000 4.63 0.00 0.00 5.69
2246 2280 8.736751 ATTACAAAATGTTCGTGTTATTGACC 57.263 30.769 0.00 0.00 0.00 4.02
2305 2339 5.243060 GGTTCCAAGTTGGCTTAAATACACT 59.757 40.000 17.68 0.00 37.47 3.55
2337 2371 9.844790 TCTAAAATATGTCATCAGTTTGCAAAG 57.155 29.630 13.26 1.65 0.00 2.77
2358 2393 6.633500 AAGTGCAGTTAAATGCTCAGTTTA 57.367 33.333 26.25 3.70 46.63 2.01
2554 2595 9.219603 TCAGTGTGGACTAAAAATTCATTCTAG 57.780 33.333 0.00 0.00 0.00 2.43
2644 2692 7.599998 ACATTCATTTCAAGACAATTTACTGCC 59.400 33.333 0.00 0.00 0.00 4.85
2736 2785 7.885009 AGGGTAAGTGCTTTTAAGTTGTAAA 57.115 32.000 0.00 0.00 0.00 2.01
3483 3540 7.304497 AGTAACCCATCATCCTTACTATGAC 57.696 40.000 0.00 0.00 36.24 3.06
3487 3544 7.487822 ACCCATCATCCTTACTATGACTATG 57.512 40.000 0.00 0.00 36.24 2.23
3524 3581 5.942826 TGCCTTTTCTGGTTGAACAAAATTT 59.057 32.000 0.00 0.00 33.88 1.82
3650 3707 2.664402 AGGCAATGTGTTCCACTCTT 57.336 45.000 0.00 0.00 35.11 2.85
3651 3708 2.233271 AGGCAATGTGTTCCACTCTTG 58.767 47.619 0.00 1.95 35.11 3.02
3652 3709 2.158623 AGGCAATGTGTTCCACTCTTGA 60.159 45.455 11.69 0.00 35.11 3.02
3653 3710 2.622942 GGCAATGTGTTCCACTCTTGAA 59.377 45.455 11.69 0.00 35.11 2.69
3654 3711 3.304928 GGCAATGTGTTCCACTCTTGAAG 60.305 47.826 11.69 0.00 35.11 3.02
3655 3712 3.854784 GCAATGTGTTCCACTCTTGAAGC 60.855 47.826 11.69 0.00 35.11 3.86
3661 3721 0.250901 TCCACTCTTGAAGCTTGGCC 60.251 55.000 2.10 0.00 0.00 5.36
3678 3738 1.004595 GCCGACGTGAACCCTTTATC 58.995 55.000 0.00 0.00 0.00 1.75
3691 3763 7.442666 GTGAACCCTTTATCCTCTTGTCATATC 59.557 40.741 0.00 0.00 0.00 1.63
3713 3785 0.759959 TTGTCACGCTGACCCCTTTA 59.240 50.000 13.24 0.00 46.40 1.85
3714 3786 0.034337 TGTCACGCTGACCCCTTTAC 59.966 55.000 13.24 0.00 46.40 2.01
3715 3787 0.672711 GTCACGCTGACCCCTTTACC 60.673 60.000 6.82 0.00 41.37 2.85
3716 3788 1.122632 TCACGCTGACCCCTTTACCA 61.123 55.000 0.00 0.00 0.00 3.25
3717 3789 0.250553 CACGCTGACCCCTTTACCAA 60.251 55.000 0.00 0.00 0.00 3.67
3718 3790 0.696501 ACGCTGACCCCTTTACCAAT 59.303 50.000 0.00 0.00 0.00 3.16
3719 3791 1.094785 CGCTGACCCCTTTACCAATG 58.905 55.000 0.00 0.00 0.00 2.82
3735 3814 3.701040 ACCAATGACTGTTGAAGCTTGTT 59.299 39.130 2.10 0.00 0.00 2.83
3753 3832 8.962884 AGCTTGTTATCCTTTTTGATTGTTTT 57.037 26.923 0.00 0.00 0.00 2.43
3754 3833 8.829612 AGCTTGTTATCCTTTTTGATTGTTTTG 58.170 29.630 0.00 0.00 0.00 2.44
3786 3879 6.734137 TCTTTACACACTTAAATTGGCAGTG 58.266 36.000 9.37 9.37 43.12 3.66
3802 3895 4.216257 TGGCAGTGAACTTTTATCTGCTTC 59.784 41.667 13.62 1.38 46.92 3.86
3931 4216 0.465460 TTGGTGTTCCGAAGCAGCTT 60.465 50.000 7.60 7.60 36.30 3.74
4016 4301 8.326765 TCCATTAGGTAAGTCTGCCTTATAAA 57.673 34.615 2.01 0.00 38.77 1.40
4046 4331 7.724061 AGTCCTTTTCTTTTCAGCTACCATAAA 59.276 33.333 0.00 0.00 0.00 1.40
4128 4413 4.623932 ACATGCTTTGTCCTCTTGACTA 57.376 40.909 0.00 0.00 44.75 2.59
4129 4414 4.573900 ACATGCTTTGTCCTCTTGACTAG 58.426 43.478 0.00 0.00 44.75 2.57
4199 4486 2.158325 TCCTCCATTTCTTGCCTGGTTT 60.158 45.455 0.00 0.00 0.00 3.27
4326 4744 8.154649 CCAATCCATGGTAAACTAACTGTATC 57.845 38.462 12.58 0.00 44.85 2.24
4417 4837 5.122519 TGCTTTTTGTATGGCTCGATCATA 58.877 37.500 4.98 4.98 0.00 2.15
4429 4849 4.541779 GCTCGATCATACTAAGGTGTCTG 58.458 47.826 0.00 0.00 0.00 3.51
4492 4912 0.881118 TTTTGAGCCGGAATCAGTGC 59.119 50.000 5.05 0.00 0.00 4.40
4495 4915 1.519719 GAGCCGGAATCAGTGCTCT 59.480 57.895 5.05 0.00 45.21 4.09
4555 4977 8.295288 CAGTCTGAAGAGTAAATTGCATTTCTT 58.705 33.333 0.00 0.00 33.82 2.52
4573 4995 6.624352 TTTCTTGCCAGATATTATGTCAGC 57.376 37.500 0.00 0.00 0.00 4.26
4578 5000 4.101430 TGCCAGATATTATGTCAGCAGTCA 59.899 41.667 3.39 0.00 0.00 3.41
4587 5009 1.069204 TGTCAGCAGTCAGTGAGTTCC 59.931 52.381 0.00 0.00 0.00 3.62
4647 5069 6.154534 GGGCCTTCTTTAATTTTGATACCACT 59.845 38.462 0.84 0.00 0.00 4.00
4672 5094 2.167487 ACAAACACACCCAAATCCACAC 59.833 45.455 0.00 0.00 0.00 3.82
4676 5098 2.834549 ACACACCCAAATCCACACAAAA 59.165 40.909 0.00 0.00 0.00 2.44
4711 5160 3.069729 ACCCTACAGAAACTGACACAGAC 59.930 47.826 5.76 0.00 35.18 3.51
4731 5180 0.462759 GCAGAAGCTTACGAGGGCAT 60.463 55.000 0.00 0.00 37.91 4.40
4791 5240 3.432186 GGACCCATCGATGATTGAGTGAA 60.432 47.826 26.86 0.00 0.00 3.18
4798 5247 4.428209 TCGATGATTGAGTGAAAGCTCTC 58.572 43.478 0.00 0.00 36.51 3.20
4802 5251 4.738124 TGATTGAGTGAAAGCTCTCTACG 58.262 43.478 2.25 0.00 36.02 3.51
4818 5267 0.106819 TACGTCTCTAGGCTCCACCC 60.107 60.000 0.00 0.00 40.58 4.61
4876 5325 2.245028 TCTAGGGTCTGACTGCATAGGT 59.755 50.000 7.85 0.00 0.00 3.08
4894 5343 4.569719 AGGTTGTTTATCCCGAGAATGT 57.430 40.909 0.00 0.00 0.00 2.71
4915 5364 0.117140 TGACATGGACCTCCTCCTGT 59.883 55.000 0.00 0.00 40.26 4.00
4924 5373 2.168728 GACCTCCTCCTGTATGTCAACC 59.831 54.545 0.00 0.00 0.00 3.77
4954 5407 2.962827 CTGACTGCTTGCGCCACTG 61.963 63.158 4.18 0.43 34.43 3.66
4955 5408 2.974698 GACTGCTTGCGCCACTGT 60.975 61.111 4.18 4.13 34.43 3.55
4956 5409 2.959357 GACTGCTTGCGCCACTGTC 61.959 63.158 4.18 10.12 34.43 3.51
4957 5410 2.667536 CTGCTTGCGCCACTGTCT 60.668 61.111 4.18 0.00 34.43 3.41
4958 5411 1.374631 CTGCTTGCGCCACTGTCTA 60.375 57.895 4.18 0.00 34.43 2.59
4959 5412 1.630244 CTGCTTGCGCCACTGTCTAC 61.630 60.000 4.18 0.00 34.43 2.59
4978 5431 7.974504 TGTCTACTTTTTCTCTTAACCTGGAT 58.025 34.615 0.00 0.00 0.00 3.41
4979 5432 8.095169 TGTCTACTTTTTCTCTTAACCTGGATC 58.905 37.037 0.00 0.00 0.00 3.36
5033 5486 7.682741 GCGAGTTCAGTGGTGTTATATACCTTA 60.683 40.741 7.85 0.00 39.01 2.69
5050 5503 4.270008 ACCTTATTTAGATGGCGCAACTT 58.730 39.130 10.83 0.00 0.00 2.66
5136 5592 8.997323 TGACATTGTTGTTTGAAATGAAGTTTT 58.003 25.926 1.89 0.00 35.79 2.43
5185 5643 9.614792 ATGTTTACCTGACTGGAGTATTTAATC 57.385 33.333 5.22 0.00 39.71 1.75
5196 5654 9.592196 ACTGGAGTATTTAATCATTGGCATTAT 57.408 29.630 0.00 0.00 0.00 1.28
5210 5668 3.260380 TGGCATTATTGGGGTCTGTTTTG 59.740 43.478 0.00 0.00 0.00 2.44
5224 5682 4.037923 GTCTGTTTTGAATCTCCTGGCAAA 59.962 41.667 0.00 0.00 0.00 3.68
5319 5777 5.474578 TGAGTTGTCTCTTGCTTATGACT 57.525 39.130 0.00 0.00 40.98 3.41
5410 5868 7.881232 ACTTGAATTTTATCTGGTCGTTCCTAA 59.119 33.333 1.80 0.00 37.07 2.69
5414 5872 9.110502 GAATTTTATCTGGTCGTTCCTAAGAAT 57.889 33.333 1.80 0.00 37.07 2.40
5550 6008 1.134788 CCTAACGTGGATGAGGGTGAC 60.135 57.143 0.00 0.00 0.00 3.67
5655 6113 2.295909 TGTTGCTGGTAAACTTCCATGC 59.704 45.455 0.00 0.00 34.26 4.06
5717 6175 4.092968 GCCGTTCTACGTTGATTTCAGAAT 59.907 41.667 0.00 0.00 40.58 2.40
5728 6186 7.591057 ACGTTGATTTCAGAATGTACATTTGTG 59.409 33.333 21.63 20.08 37.40 3.33
5760 6218 8.969121 TGTTTTTACATATTGCATCAGAACTG 57.031 30.769 0.00 0.00 0.00 3.16
5840 6298 6.016777 CCAGAGATTCTTGCACTTGTTAGTTT 60.017 38.462 0.00 0.00 30.26 2.66
6116 6773 6.043243 ACTTCTTGGAGAACACTCTGGATTAA 59.957 38.462 0.00 0.00 29.89 1.40
6133 6790 8.383175 TCTGGATTAACAGAATCTTACTTTGGT 58.617 33.333 0.00 0.00 44.03 3.67
6136 6793 9.010029 GGATTAACAGAATCTTACTTTGGTCAA 57.990 33.333 0.00 0.00 0.00 3.18
6188 6848 1.812571 CAAGAAATGACCGGTCTTGGG 59.187 52.381 33.39 13.70 42.91 4.12
6302 6962 7.534852 AGGATAGGACCATTATGGCATTTTTA 58.465 34.615 11.72 0.00 42.67 1.52
6429 7094 1.199558 GAAGGAGTACAAGCGACGACT 59.800 52.381 0.00 0.00 0.00 4.18
6439 7104 1.370172 GCGACGACTGGGCTATACG 60.370 63.158 0.00 0.00 0.00 3.06
6445 7110 1.076485 ACTGGGCTATACGTCGGGT 60.076 57.895 0.00 0.00 0.00 5.28
6464 7129 0.612174 TGAGGGGTGAAGAGTCGAGG 60.612 60.000 0.00 0.00 0.00 4.63
6525 7190 1.057208 CGCATTCGCTGTGTGTACG 59.943 57.895 0.00 0.00 35.30 3.67
6561 7226 3.999603 TCAGGAGGAGAAGGATCATCAA 58.000 45.455 0.00 0.00 31.69 2.57
6562 7227 3.966006 TCAGGAGGAGAAGGATCATCAAG 59.034 47.826 0.00 0.00 31.69 3.02
6677 7345 5.220931 GCAACTGTGTTCTCTTCATGTTCTT 60.221 40.000 0.00 0.00 0.00 2.52
6720 7388 0.608640 ATGGAATCGAGCGGGTATCC 59.391 55.000 0.00 0.00 0.00 2.59
6731 7399 4.456806 GGTATCCGCACCCACATC 57.543 61.111 0.00 0.00 31.91 3.06
6732 7400 1.524961 GGTATCCGCACCCACATCA 59.475 57.895 0.00 0.00 31.91 3.07
6733 7401 0.532862 GGTATCCGCACCCACATCAG 60.533 60.000 0.00 0.00 31.91 2.90
6734 7402 0.532862 GTATCCGCACCCACATCAGG 60.533 60.000 0.00 0.00 0.00 3.86
6735 7403 0.980754 TATCCGCACCCACATCAGGT 60.981 55.000 0.00 0.00 38.48 4.00
6740 7408 3.495729 ACCCACATCAGGTGTCCC 58.504 61.111 0.00 0.00 46.44 4.46
6741 7409 1.463214 ACCCACATCAGGTGTCCCA 60.463 57.895 0.00 0.00 46.44 4.37
6742 7410 1.300963 CCCACATCAGGTGTCCCAG 59.699 63.158 0.00 0.00 46.44 4.45
6743 7411 1.200760 CCCACATCAGGTGTCCCAGA 61.201 60.000 0.00 0.00 46.44 3.86
6744 7412 0.692476 CCACATCAGGTGTCCCAGAA 59.308 55.000 0.00 0.00 46.44 3.02
6745 7413 1.073763 CCACATCAGGTGTCCCAGAAA 59.926 52.381 0.00 0.00 46.44 2.52
6746 7414 2.291153 CCACATCAGGTGTCCCAGAAAT 60.291 50.000 0.00 0.00 46.44 2.17
6747 7415 3.012518 CACATCAGGTGTCCCAGAAATC 58.987 50.000 0.00 0.00 42.75 2.17
6748 7416 2.915604 ACATCAGGTGTCCCAGAAATCT 59.084 45.455 0.00 0.00 35.77 2.40
6749 7417 3.054802 ACATCAGGTGTCCCAGAAATCTC 60.055 47.826 0.00 0.00 35.77 2.75
6750 7418 2.619931 TCAGGTGTCCCAGAAATCTCA 58.380 47.619 0.00 0.00 0.00 3.27
6751 7419 2.978978 TCAGGTGTCCCAGAAATCTCAA 59.021 45.455 0.00 0.00 0.00 3.02
6752 7420 3.394274 TCAGGTGTCCCAGAAATCTCAAA 59.606 43.478 0.00 0.00 0.00 2.69
6753 7421 3.755378 CAGGTGTCCCAGAAATCTCAAAG 59.245 47.826 0.00 0.00 0.00 2.77
6754 7422 3.395941 AGGTGTCCCAGAAATCTCAAAGT 59.604 43.478 0.00 0.00 0.00 2.66
6755 7423 4.141158 AGGTGTCCCAGAAATCTCAAAGTT 60.141 41.667 0.00 0.00 0.00 2.66
6756 7424 5.073144 AGGTGTCCCAGAAATCTCAAAGTTA 59.927 40.000 0.00 0.00 0.00 2.24
6757 7425 5.946377 GGTGTCCCAGAAATCTCAAAGTTAT 59.054 40.000 0.00 0.00 0.00 1.89
6758 7426 6.127897 GGTGTCCCAGAAATCTCAAAGTTATG 60.128 42.308 0.00 0.00 0.00 1.90
6759 7427 6.431234 GTGTCCCAGAAATCTCAAAGTTATGT 59.569 38.462 0.00 0.00 0.00 2.29
6760 7428 7.606456 GTGTCCCAGAAATCTCAAAGTTATGTA 59.394 37.037 0.00 0.00 0.00 2.29
6761 7429 7.824289 TGTCCCAGAAATCTCAAAGTTATGTAG 59.176 37.037 0.00 0.00 0.00 2.74
6762 7430 8.041323 GTCCCAGAAATCTCAAAGTTATGTAGA 58.959 37.037 0.00 0.00 0.00 2.59
6763 7431 8.602424 TCCCAGAAATCTCAAAGTTATGTAGAA 58.398 33.333 0.00 0.00 0.00 2.10
6764 7432 8.669243 CCCAGAAATCTCAAAGTTATGTAGAAC 58.331 37.037 0.00 0.00 0.00 3.01
6765 7433 9.219603 CCAGAAATCTCAAAGTTATGTAGAACA 57.780 33.333 0.00 0.00 0.00 3.18
6770 7438 9.739276 AATCTCAAAGTTATGTAGAACAATCCA 57.261 29.630 0.00 0.00 0.00 3.41
6771 7439 8.547967 TCTCAAAGTTATGTAGAACAATCCAC 57.452 34.615 0.00 0.00 0.00 4.02
6772 7440 7.330946 TCTCAAAGTTATGTAGAACAATCCACG 59.669 37.037 0.00 0.00 0.00 4.94
6773 7441 5.796350 AAGTTATGTAGAACAATCCACGC 57.204 39.130 0.00 0.00 0.00 5.34
6774 7442 4.827692 AGTTATGTAGAACAATCCACGCA 58.172 39.130 0.00 0.00 0.00 5.24
6775 7443 5.242434 AGTTATGTAGAACAATCCACGCAA 58.758 37.500 0.00 0.00 0.00 4.85
6776 7444 5.880332 AGTTATGTAGAACAATCCACGCAAT 59.120 36.000 0.00 0.00 0.00 3.56
6777 7445 7.045416 AGTTATGTAGAACAATCCACGCAATA 58.955 34.615 0.00 0.00 0.00 1.90
6778 7446 7.715249 AGTTATGTAGAACAATCCACGCAATAT 59.285 33.333 0.00 0.00 0.00 1.28
6779 7447 6.942532 ATGTAGAACAATCCACGCAATATT 57.057 33.333 0.00 0.00 0.00 1.28
6780 7448 6.751514 TGTAGAACAATCCACGCAATATTT 57.248 33.333 0.00 0.00 0.00 1.40
6781 7449 6.781138 TGTAGAACAATCCACGCAATATTTC 58.219 36.000 0.00 0.00 0.00 2.17
6782 7450 5.248870 AGAACAATCCACGCAATATTTCC 57.751 39.130 0.00 0.00 0.00 3.13
6783 7451 4.097892 AGAACAATCCACGCAATATTTCCC 59.902 41.667 0.00 0.00 0.00 3.97
6784 7452 3.631250 ACAATCCACGCAATATTTCCCT 58.369 40.909 0.00 0.00 0.00 4.20
6785 7453 3.381272 ACAATCCACGCAATATTTCCCTG 59.619 43.478 0.00 0.00 0.00 4.45
6786 7454 1.388547 TCCACGCAATATTTCCCTGC 58.611 50.000 0.00 0.00 0.00 4.85
6787 7455 1.064758 TCCACGCAATATTTCCCTGCT 60.065 47.619 0.00 0.00 33.82 4.24
6788 7456 1.066002 CCACGCAATATTTCCCTGCTG 59.934 52.381 0.00 0.00 33.82 4.41
6789 7457 2.016318 CACGCAATATTTCCCTGCTGA 58.984 47.619 0.00 0.00 33.82 4.26
6790 7458 2.017049 ACGCAATATTTCCCTGCTGAC 58.983 47.619 0.00 0.00 33.82 3.51
6791 7459 1.003545 CGCAATATTTCCCTGCTGACG 60.004 52.381 0.00 0.00 33.82 4.35
6792 7460 2.017049 GCAATATTTCCCTGCTGACGT 58.983 47.619 0.00 0.00 33.20 4.34
6793 7461 2.223340 GCAATATTTCCCTGCTGACGTG 60.223 50.000 0.00 0.00 33.20 4.49
6794 7462 3.009723 CAATATTTCCCTGCTGACGTGT 58.990 45.455 0.00 0.00 0.00 4.49
6795 7463 2.093306 TATTTCCCTGCTGACGTGTG 57.907 50.000 0.00 0.00 0.00 3.82
6796 7464 0.606401 ATTTCCCTGCTGACGTGTGG 60.606 55.000 0.00 0.00 0.00 4.17
6797 7465 1.978455 TTTCCCTGCTGACGTGTGGT 61.978 55.000 0.00 0.00 0.00 4.16
6798 7466 1.978455 TTCCCTGCTGACGTGTGGTT 61.978 55.000 0.00 0.00 0.00 3.67
6799 7467 2.253758 CCCTGCTGACGTGTGGTTG 61.254 63.158 0.00 0.00 0.00 3.77
6800 7468 1.523711 CCTGCTGACGTGTGGTTGT 60.524 57.895 0.00 0.00 0.00 3.32
6801 7469 1.643292 CTGCTGACGTGTGGTTGTG 59.357 57.895 0.00 0.00 0.00 3.33
6802 7470 2.327940 GCTGACGTGTGGTTGTGC 59.672 61.111 0.00 0.00 0.00 4.57
6803 7471 2.468670 GCTGACGTGTGGTTGTGCA 61.469 57.895 0.00 0.00 0.00 4.57
6804 7472 1.351707 CTGACGTGTGGTTGTGCAC 59.648 57.895 10.75 10.75 0.00 4.57
6805 7473 1.078778 TGACGTGTGGTTGTGCACT 60.079 52.632 19.41 0.00 33.78 4.40
6806 7474 1.351707 GACGTGTGGTTGTGCACTG 59.648 57.895 19.41 0.38 33.78 3.66
6807 7475 2.047151 GACGTGTGGTTGTGCACTGG 62.047 60.000 19.41 0.88 33.78 4.00
6808 7476 2.412937 GTGTGGTTGTGCACTGGC 59.587 61.111 19.41 7.81 41.68 4.85
6809 7477 3.208383 TGTGGTTGTGCACTGGCG 61.208 61.111 19.41 0.00 45.35 5.69
6810 7478 3.964875 GTGGTTGTGCACTGGCGG 61.965 66.667 19.41 0.00 45.35 6.13
6811 7479 4.182433 TGGTTGTGCACTGGCGGA 62.182 61.111 19.41 0.00 45.35 5.54
6812 7480 3.357079 GGTTGTGCACTGGCGGAG 61.357 66.667 19.41 0.00 45.35 4.63
6813 7481 3.357079 GTTGTGCACTGGCGGAGG 61.357 66.667 19.41 0.00 45.35 4.30
6814 7482 3.872603 TTGTGCACTGGCGGAGGT 61.873 61.111 19.41 0.00 45.35 3.85
6815 7483 3.825160 TTGTGCACTGGCGGAGGTC 62.825 63.158 19.41 0.00 45.35 3.85
6816 7484 4.008933 GTGCACTGGCGGAGGTCT 62.009 66.667 10.32 0.00 45.35 3.85
6817 7485 3.241530 TGCACTGGCGGAGGTCTT 61.242 61.111 0.00 0.00 45.35 3.01
6818 7486 2.743928 GCACTGGCGGAGGTCTTG 60.744 66.667 0.00 0.00 0.00 3.02
6819 7487 2.046892 CACTGGCGGAGGTCTTGG 60.047 66.667 0.00 0.00 0.00 3.61
6820 7488 4.021925 ACTGGCGGAGGTCTTGGC 62.022 66.667 0.00 0.00 0.00 4.52
6821 7489 3.710722 CTGGCGGAGGTCTTGGCT 61.711 66.667 0.00 0.00 0.00 4.75
6822 7490 2.284331 TGGCGGAGGTCTTGGCTA 60.284 61.111 0.00 0.00 0.00 3.93
6823 7491 1.899437 CTGGCGGAGGTCTTGGCTAA 61.899 60.000 0.00 0.00 0.00 3.09
6824 7492 1.298667 GGCGGAGGTCTTGGCTAAA 59.701 57.895 0.00 0.00 0.00 1.85
6825 7493 0.322187 GGCGGAGGTCTTGGCTAAAA 60.322 55.000 0.00 0.00 0.00 1.52
6826 7494 0.803117 GCGGAGGTCTTGGCTAAAAC 59.197 55.000 0.00 0.00 0.00 2.43
6827 7495 1.076332 CGGAGGTCTTGGCTAAAACG 58.924 55.000 0.00 0.00 0.00 3.60
6828 7496 0.803117 GGAGGTCTTGGCTAAAACGC 59.197 55.000 0.00 0.00 0.00 4.84
6841 7509 1.452145 AAAACGCCGACCTGCAACAT 61.452 50.000 0.00 0.00 0.00 2.71
6950 7618 1.762370 TGTCTGAAGCTTCTGTGGTGA 59.238 47.619 26.09 11.93 0.00 4.02
6966 7634 4.811969 TGGTGACACGATGTTAAGGTAT 57.188 40.909 0.00 0.00 33.40 2.73
6968 7636 3.308866 GGTGACACGATGTTAAGGTATGC 59.691 47.826 0.00 0.00 0.00 3.14
6969 7637 3.308866 GTGACACGATGTTAAGGTATGCC 59.691 47.826 0.00 0.00 0.00 4.40
6979 7647 2.426842 AAGGTATGCCTGAAGCTTCC 57.573 50.000 23.42 9.01 46.33 3.46
6980 7648 0.548510 AGGTATGCCTGAAGCTTCCC 59.451 55.000 23.42 14.74 45.05 3.97
6988 7656 1.839994 CCTGAAGCTTCCCTGGTGATA 59.160 52.381 23.42 0.58 0.00 2.15
6989 7657 2.420687 CCTGAAGCTTCCCTGGTGATAC 60.421 54.545 23.42 0.00 0.00 2.24
6990 7658 1.207089 TGAAGCTTCCCTGGTGATACG 59.793 52.381 23.42 0.00 0.00 3.06
6992 7660 0.617820 AGCTTCCCTGGTGATACGGT 60.618 55.000 0.00 0.00 0.00 4.83
6993 7661 0.462047 GCTTCCCTGGTGATACGGTG 60.462 60.000 0.00 0.00 0.00 4.94
6994 7662 0.902531 CTTCCCTGGTGATACGGTGT 59.097 55.000 0.00 0.00 0.00 4.16
6997 7665 1.276989 TCCCTGGTGATACGGTGTTTC 59.723 52.381 0.00 0.00 0.00 2.78
7000 7668 2.028476 CCTGGTGATACGGTGTTTCAGA 60.028 50.000 0.00 0.00 0.00 3.27
7002 7670 3.595173 TGGTGATACGGTGTTTCAGATG 58.405 45.455 0.00 0.00 0.00 2.90
7004 7672 3.370978 GGTGATACGGTGTTTCAGATGTG 59.629 47.826 0.00 0.00 0.00 3.21
7005 7673 3.994392 GTGATACGGTGTTTCAGATGTGT 59.006 43.478 0.00 0.00 0.00 3.72
7006 7674 5.165676 GTGATACGGTGTTTCAGATGTGTA 58.834 41.667 0.00 0.00 0.00 2.90
7007 7675 5.810587 GTGATACGGTGTTTCAGATGTGTAT 59.189 40.000 0.00 0.00 0.00 2.29
7008 7676 5.810074 TGATACGGTGTTTCAGATGTGTATG 59.190 40.000 0.00 0.00 0.00 2.39
7010 7678 5.142061 ACGGTGTTTCAGATGTGTATGTA 57.858 39.130 0.00 0.00 0.00 2.29
7011 7679 5.168569 ACGGTGTTTCAGATGTGTATGTAG 58.831 41.667 0.00 0.00 0.00 2.74
7012 7680 5.047590 ACGGTGTTTCAGATGTGTATGTAGA 60.048 40.000 0.00 0.00 0.00 2.59
7013 7681 5.288712 CGGTGTTTCAGATGTGTATGTAGAC 59.711 44.000 0.00 0.00 0.00 2.59
7014 7682 6.398918 GGTGTTTCAGATGTGTATGTAGACT 58.601 40.000 0.00 0.00 0.00 3.24
7015 7683 7.544622 GGTGTTTCAGATGTGTATGTAGACTA 58.455 38.462 0.00 0.00 0.00 2.59
7036 7708 9.535878 AGACTATAACAAATTTAGCTAGCTGAC 57.464 33.333 27.68 5.92 0.00 3.51
7042 7714 6.947464 ACAAATTTAGCTAGCTGACCTCTTA 58.053 36.000 27.68 2.95 0.00 2.10
7058 7737 4.225042 ACCTCTTAAGCATGTCCATGTGTA 59.775 41.667 8.91 0.00 40.80 2.90
7064 7743 2.235155 AGCATGTCCATGTGTAACCGTA 59.765 45.455 8.91 0.00 40.80 4.02
7068 7747 3.655486 TGTCCATGTGTAACCGTAAGTG 58.345 45.455 0.00 0.00 34.36 3.16
7072 7751 5.870978 GTCCATGTGTAACCGTAAGTGTTAT 59.129 40.000 0.00 0.00 36.11 1.89
7077 7756 6.054295 TGTGTAACCGTAAGTGTTATTTGGT 58.946 36.000 0.00 0.00 36.11 3.67
7078 7757 6.018098 TGTGTAACCGTAAGTGTTATTTGGTG 60.018 38.462 0.00 0.00 36.11 4.17
7079 7758 6.202570 GTGTAACCGTAAGTGTTATTTGGTGA 59.797 38.462 0.00 0.00 36.11 4.02
7080 7759 5.934935 AACCGTAAGTGTTATTTGGTGAG 57.065 39.130 0.00 0.00 0.00 3.51
7081 7760 5.217978 ACCGTAAGTGTTATTTGGTGAGA 57.782 39.130 0.00 0.00 0.00 3.27
7082 7761 5.801380 ACCGTAAGTGTTATTTGGTGAGAT 58.199 37.500 0.00 0.00 0.00 2.75
7083 7762 5.642063 ACCGTAAGTGTTATTTGGTGAGATG 59.358 40.000 0.00 0.00 0.00 2.90
7084 7763 5.447279 CCGTAAGTGTTATTTGGTGAGATGC 60.447 44.000 0.00 0.00 0.00 3.91
7085 7764 5.121611 CGTAAGTGTTATTTGGTGAGATGCA 59.878 40.000 0.00 0.00 0.00 3.96
7086 7765 6.348132 CGTAAGTGTTATTTGGTGAGATGCAA 60.348 38.462 0.00 0.00 0.00 4.08
7087 7766 5.633830 AGTGTTATTTGGTGAGATGCAAG 57.366 39.130 0.00 0.00 0.00 4.01
7088 7767 4.082571 AGTGTTATTTGGTGAGATGCAAGC 60.083 41.667 0.00 0.00 0.00 4.01
7089 7768 3.119884 TGTTATTTGGTGAGATGCAAGCG 60.120 43.478 0.00 0.00 0.00 4.68
7090 7769 0.813184 ATTTGGTGAGATGCAAGCGG 59.187 50.000 0.00 0.00 0.00 5.52
7091 7770 0.250684 TTTGGTGAGATGCAAGCGGA 60.251 50.000 0.00 0.00 0.00 5.54
7092 7771 0.250684 TTGGTGAGATGCAAGCGGAA 60.251 50.000 0.00 0.00 0.00 4.30
7093 7772 0.955428 TGGTGAGATGCAAGCGGAAC 60.955 55.000 0.00 0.00 0.00 3.62
7094 7773 0.674895 GGTGAGATGCAAGCGGAACT 60.675 55.000 0.00 0.00 0.00 3.01
7095 7774 0.445436 GTGAGATGCAAGCGGAACTG 59.555 55.000 0.00 0.00 0.00 3.16
7096 7775 0.674581 TGAGATGCAAGCGGAACTGG 60.675 55.000 0.00 0.00 0.00 4.00
7097 7776 1.986575 GAGATGCAAGCGGAACTGGC 61.987 60.000 0.00 0.00 46.65 4.85
7098 7777 2.034687 ATGCAAGCGGAACTGGCT 59.965 55.556 0.00 0.00 46.59 4.75
7099 7778 2.262471 GATGCAAGCGGAACTGGCTG 62.262 60.000 0.00 0.00 46.59 4.85
7100 7779 3.741476 GCAAGCGGAACTGGCTGG 61.741 66.667 0.00 0.00 42.69 4.85
7101 7780 3.741476 CAAGCGGAACTGGCTGGC 61.741 66.667 0.00 0.00 41.39 4.85
7102 7781 4.269523 AAGCGGAACTGGCTGGCA 62.270 61.111 3.18 3.18 41.39 4.92
7103 7782 4.711949 AGCGGAACTGGCTGGCAG 62.712 66.667 27.32 27.32 39.77 4.85
7104 7783 4.704833 GCGGAACTGGCTGGCAGA 62.705 66.667 34.18 0.00 0.00 4.26
7105 7784 2.743928 CGGAACTGGCTGGCAGAC 60.744 66.667 34.18 25.06 0.00 3.51
7106 7785 2.431683 GGAACTGGCTGGCAGACA 59.568 61.111 34.18 24.05 0.00 3.41
7107 7786 1.228245 GGAACTGGCTGGCAGACAA 60.228 57.895 34.18 8.42 29.23 3.18
7108 7787 0.610232 GGAACTGGCTGGCAGACAAT 60.610 55.000 34.18 12.69 29.23 2.71
7109 7788 0.524862 GAACTGGCTGGCAGACAATG 59.475 55.000 34.18 16.31 29.23 2.82
7124 7803 5.872635 CAGACAATGCCATAGTGTTACTTG 58.127 41.667 0.00 0.00 37.79 3.16
7125 7804 5.412594 CAGACAATGCCATAGTGTTACTTGT 59.587 40.000 0.00 0.00 37.79 3.16
7126 7805 6.003950 AGACAATGCCATAGTGTTACTTGTT 58.996 36.000 0.00 0.00 37.79 2.83
7127 7806 6.490040 AGACAATGCCATAGTGTTACTTGTTT 59.510 34.615 0.00 0.00 37.79 2.83
7128 7807 6.677913 ACAATGCCATAGTGTTACTTGTTTC 58.322 36.000 0.00 0.00 32.95 2.78
7129 7808 6.264292 ACAATGCCATAGTGTTACTTGTTTCA 59.736 34.615 0.00 0.00 32.95 2.69
7130 7809 5.940192 TGCCATAGTGTTACTTGTTTCAG 57.060 39.130 0.00 0.00 0.00 3.02
7131 7810 5.373222 TGCCATAGTGTTACTTGTTTCAGT 58.627 37.500 0.00 0.00 0.00 3.41
7132 7811 5.825679 TGCCATAGTGTTACTTGTTTCAGTT 59.174 36.000 0.00 0.00 0.00 3.16
7133 7812 6.320164 TGCCATAGTGTTACTTGTTTCAGTTT 59.680 34.615 0.00 0.00 0.00 2.66
7134 7813 7.147983 TGCCATAGTGTTACTTGTTTCAGTTTT 60.148 33.333 0.00 0.00 0.00 2.43
7135 7814 8.347035 GCCATAGTGTTACTTGTTTCAGTTTTA 58.653 33.333 0.00 0.00 0.00 1.52
7136 7815 9.878599 CCATAGTGTTACTTGTTTCAGTTTTAG 57.121 33.333 0.00 0.00 0.00 1.85
7137 7816 9.878599 CATAGTGTTACTTGTTTCAGTTTTAGG 57.121 33.333 0.00 0.00 0.00 2.69
7138 7817 6.792326 AGTGTTACTTGTTTCAGTTTTAGGC 58.208 36.000 0.00 0.00 0.00 3.93
7139 7818 6.376018 AGTGTTACTTGTTTCAGTTTTAGGCA 59.624 34.615 0.00 0.00 0.00 4.75
7140 7819 7.030768 GTGTTACTTGTTTCAGTTTTAGGCAA 58.969 34.615 0.00 0.00 0.00 4.52
7141 7820 7.220108 GTGTTACTTGTTTCAGTTTTAGGCAAG 59.780 37.037 0.00 0.00 38.14 4.01
7142 7821 5.914898 ACTTGTTTCAGTTTTAGGCAAGT 57.085 34.783 0.00 0.00 39.79 3.16
7143 7822 5.650543 ACTTGTTTCAGTTTTAGGCAAGTG 58.349 37.500 0.00 0.00 41.99 3.16
7144 7823 5.417580 ACTTGTTTCAGTTTTAGGCAAGTGA 59.582 36.000 0.00 0.00 41.99 3.41
7145 7824 6.096846 ACTTGTTTCAGTTTTAGGCAAGTGAT 59.903 34.615 0.00 0.00 41.99 3.06
7146 7825 5.830912 TGTTTCAGTTTTAGGCAAGTGATG 58.169 37.500 0.00 0.00 36.26 3.07
7147 7826 5.592282 TGTTTCAGTTTTAGGCAAGTGATGA 59.408 36.000 0.00 0.00 36.26 2.92
7148 7827 5.689383 TTCAGTTTTAGGCAAGTGATGAC 57.311 39.130 0.00 0.00 36.26 3.06
7149 7828 4.713553 TCAGTTTTAGGCAAGTGATGACA 58.286 39.130 0.00 0.00 40.75 3.58
7150 7829 5.129634 TCAGTTTTAGGCAAGTGATGACAA 58.870 37.500 0.00 0.00 40.75 3.18
7151 7830 5.592282 TCAGTTTTAGGCAAGTGATGACAAA 59.408 36.000 0.00 0.00 40.75 2.83
7152 7831 6.265196 TCAGTTTTAGGCAAGTGATGACAAAT 59.735 34.615 0.00 0.00 40.75 2.32
7153 7832 6.925165 CAGTTTTAGGCAAGTGATGACAAATT 59.075 34.615 0.00 0.00 40.75 1.82
7154 7833 8.081633 CAGTTTTAGGCAAGTGATGACAAATTA 58.918 33.333 0.00 0.00 40.75 1.40
7155 7834 8.806146 AGTTTTAGGCAAGTGATGACAAATTAT 58.194 29.630 0.00 0.00 40.75 1.28
7156 7835 8.863049 GTTTTAGGCAAGTGATGACAAATTATG 58.137 33.333 0.00 0.00 40.75 1.90
7157 7836 5.587388 AGGCAAGTGATGACAAATTATGG 57.413 39.130 0.00 0.00 40.75 2.74
7158 7837 5.263599 AGGCAAGTGATGACAAATTATGGA 58.736 37.500 0.00 0.00 40.75 3.41
7159 7838 5.126061 AGGCAAGTGATGACAAATTATGGAC 59.874 40.000 0.00 0.00 40.75 4.02
7160 7839 5.126061 GGCAAGTGATGACAAATTATGGACT 59.874 40.000 0.00 0.00 36.87 3.85
7161 7840 6.318648 GGCAAGTGATGACAAATTATGGACTA 59.681 38.462 0.00 0.00 36.87 2.59
7162 7841 7.148086 GGCAAGTGATGACAAATTATGGACTAA 60.148 37.037 0.00 0.00 36.87 2.24
7163 7842 8.408601 GCAAGTGATGACAAATTATGGACTAAT 58.591 33.333 0.00 0.00 0.00 1.73
7178 7857 6.978343 TGGACTAATTTATGAGTTTCGTGG 57.022 37.500 0.00 0.00 0.00 4.94
7179 7858 5.878116 TGGACTAATTTATGAGTTTCGTGGG 59.122 40.000 0.00 0.00 0.00 4.61
7180 7859 5.296035 GGACTAATTTATGAGTTTCGTGGGG 59.704 44.000 0.00 0.00 0.00 4.96
7181 7860 6.057321 ACTAATTTATGAGTTTCGTGGGGA 57.943 37.500 0.00 0.00 0.00 4.81
7182 7861 5.878669 ACTAATTTATGAGTTTCGTGGGGAC 59.121 40.000 0.00 0.00 0.00 4.46
7183 7862 2.373540 TTATGAGTTTCGTGGGGACG 57.626 50.000 0.00 0.00 0.00 4.79
7184 7863 1.259609 TATGAGTTTCGTGGGGACGT 58.740 50.000 0.00 0.00 0.00 4.34
7185 7864 0.395312 ATGAGTTTCGTGGGGACGTT 59.605 50.000 0.00 0.00 0.00 3.99
7186 7865 0.531090 TGAGTTTCGTGGGGACGTTG 60.531 55.000 0.00 0.00 0.00 4.10
7187 7866 0.531311 GAGTTTCGTGGGGACGTTGT 60.531 55.000 0.00 0.00 0.00 3.32
7217 7896 4.992511 GCACCCGCCGTGTGGTTA 62.993 66.667 1.18 0.00 44.97 2.85
7218 7897 2.740826 CACCCGCCGTGTGGTTAG 60.741 66.667 0.00 0.00 37.73 2.34
7220 7899 3.697747 CCCGCCGTGTGGTTAGGA 61.698 66.667 3.33 0.00 37.67 2.94
7253 7940 6.547141 TGCCTGAAATCATTTCCGAATCTAAT 59.453 34.615 7.68 0.00 38.90 1.73
7268 7955 7.435192 TCCGAATCTAATAGCATATATTGTGCG 59.565 37.037 7.01 0.00 46.86 5.34
7286 7973 4.047822 GTGCGAGAGATTTGGACATCTAG 58.952 47.826 0.00 0.00 33.36 2.43
7288 7975 4.202060 TGCGAGAGATTTGGACATCTAGAC 60.202 45.833 0.00 0.00 33.36 2.59
7292 7979 6.460814 CGAGAGATTTGGACATCTAGACACAT 60.461 42.308 0.00 0.00 33.36 3.21
7294 7981 8.311395 AGAGATTTGGACATCTAGACACATTA 57.689 34.615 0.00 0.00 33.36 1.90
7295 7982 8.932610 AGAGATTTGGACATCTAGACACATTAT 58.067 33.333 0.00 0.00 33.36 1.28
7298 7985 9.113838 GATTTGGACATCTAGACACATTATGTT 57.886 33.333 0.00 0.00 43.56 2.71
7299 7986 8.862325 TTTGGACATCTAGACACATTATGTTT 57.138 30.769 0.00 0.00 43.56 2.83
7306 7993 9.941664 CATCTAGACACATTATGTTTGAAATCC 57.058 33.333 0.00 0.00 43.56 3.01
7307 7994 9.911788 ATCTAGACACATTATGTTTGAAATCCT 57.088 29.630 0.00 0.00 43.56 3.24
7312 7999 8.281212 ACACATTATGTTTGAAATCCTAGACC 57.719 34.615 0.00 0.00 38.98 3.85
7314 8001 6.542370 ACATTATGTTTGAAATCCTAGACCGG 59.458 38.462 0.00 0.00 0.00 5.28
7316 8003 4.360951 TGTTTGAAATCCTAGACCGGTT 57.639 40.909 9.42 0.87 0.00 4.44
7317 8004 5.486735 TGTTTGAAATCCTAGACCGGTTA 57.513 39.130 9.42 2.20 0.00 2.85
7318 8005 5.484715 TGTTTGAAATCCTAGACCGGTTAG 58.515 41.667 9.42 12.31 0.00 2.34
7325 8014 2.705658 TCCTAGACCGGTTAGGATACGA 59.294 50.000 27.76 14.67 41.30 3.43
7336 8025 7.040617 ACCGGTTAGGATACGATATATGCTATG 60.041 40.741 0.00 0.00 45.00 2.23
7337 8026 7.174426 CCGGTTAGGATACGATATATGCTATGA 59.826 40.741 0.00 0.00 45.00 2.15
7338 8027 8.016229 CGGTTAGGATACGATATATGCTATGAC 58.984 40.741 0.00 0.00 46.39 3.06
7363 8052 9.102757 ACATTATTAACATCCGATGATATGAGC 57.897 33.333 15.47 0.00 0.00 4.26
7385 8074 4.096382 GCAATCTGATTTTTCTAGCCGGAA 59.904 41.667 5.05 0.00 0.00 4.30
7392 8081 6.361433 TGATTTTTCTAGCCGGAATATCCAA 58.639 36.000 5.05 0.00 35.91 3.53
7394 8083 8.160765 TGATTTTTCTAGCCGGAATATCCAATA 58.839 33.333 5.05 0.00 35.91 1.90
7395 8084 7.739498 TTTTTCTAGCCGGAATATCCAATAC 57.261 36.000 5.05 0.00 35.91 1.89
7401 8090 8.653191 TCTAGCCGGAATATCCAATACTTTTAA 58.347 33.333 5.05 0.00 35.91 1.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 5.728637 TCATATGCATCGGTGTAGAAGAT 57.271 39.130 0.19 0.00 0.00 2.40
14 16 5.181009 ACAGTCCATAATCATATGCATCGG 58.819 41.667 0.19 0.00 38.06 4.18
28 30 4.141574 GGTTTACCAGGCATACAGTCCATA 60.142 45.833 0.00 0.00 35.64 2.74
30 32 2.026636 GGTTTACCAGGCATACAGTCCA 60.027 50.000 0.00 0.00 35.64 4.02
44 48 0.039180 CTGGGTCTTGGGGGTTTACC 59.961 60.000 0.00 0.00 39.11 2.85
46 50 1.068943 TGCTGGGTCTTGGGGGTTTA 61.069 55.000 0.00 0.00 0.00 2.01
59 63 1.870055 GACCATGTGCTGTTGCTGGG 61.870 60.000 0.00 0.00 36.64 4.45
66 70 2.046892 GGCTCGACCATGTGCTGT 60.047 61.111 0.00 0.00 38.86 4.40
67 71 2.046988 TGGCTCGACCATGTGCTG 60.047 61.111 3.02 0.00 46.36 4.41
84 88 1.526887 CATACACCACCGGCTGGAT 59.473 57.895 21.41 15.79 43.95 3.41
89 93 4.460683 TCCGCATACACCACCGGC 62.461 66.667 0.00 0.00 40.49 6.13
90 94 2.202878 CTCCGCATACACCACCGG 60.203 66.667 0.00 0.00 41.97 5.28
93 97 2.267642 TGCCTCCGCATACACCAC 59.732 61.111 0.00 0.00 41.12 4.16
103 107 0.757188 ACCTCTAGGTGATGCCTCCG 60.757 60.000 0.00 0.00 46.96 4.63
121 125 1.089920 TCGTACCTACTCCGCTTGAC 58.910 55.000 0.00 0.00 0.00 3.18
124 128 0.455005 GCTTCGTACCTACTCCGCTT 59.545 55.000 0.00 0.00 0.00 4.68
126 130 0.248539 CTGCTTCGTACCTACTCCGC 60.249 60.000 0.00 0.00 0.00 5.54
135 139 2.736721 TCAAAGTGATGCTGCTTCGTAC 59.263 45.455 10.45 4.84 0.00 3.67
150 154 5.509716 TCGTGATATATGGTCGTCAAAGT 57.490 39.130 0.00 0.00 0.00 2.66
152 156 4.037565 AGCTCGTGATATATGGTCGTCAAA 59.962 41.667 0.00 0.00 0.00 2.69
154 158 3.146847 AGCTCGTGATATATGGTCGTCA 58.853 45.455 0.00 0.00 0.00 4.35
158 162 4.096682 GGTCCTAGCTCGTGATATATGGTC 59.903 50.000 0.00 0.00 0.00 4.02
166 171 0.461961 GCAAGGTCCTAGCTCGTGAT 59.538 55.000 0.00 0.00 0.00 3.06
169 174 1.893786 CAGCAAGGTCCTAGCTCGT 59.106 57.895 0.00 0.00 36.26 4.18
175 180 1.888436 CTCGGTGCAGCAAGGTCCTA 61.888 60.000 17.33 0.00 0.00 2.94
184 189 2.125753 CTCACTCCTCGGTGCAGC 60.126 66.667 5.64 5.64 37.16 5.25
185 190 1.214062 GTCTCACTCCTCGGTGCAG 59.786 63.158 0.00 0.00 37.16 4.41
191 196 1.658686 CCCTTCGGTCTCACTCCTCG 61.659 65.000 0.00 0.00 0.00 4.63
193 198 0.900647 CACCCTTCGGTCTCACTCCT 60.901 60.000 0.00 0.00 42.04 3.69
222 227 3.755378 CACCCTCATTTCTCCACTCAAAG 59.245 47.826 0.00 0.00 0.00 2.77
228 233 2.427506 GTGACACCCTCATTTCTCCAC 58.572 52.381 0.00 0.00 0.00 4.02
237 242 1.623163 TACATGTCGTGACACCCTCA 58.377 50.000 0.00 0.00 45.05 3.86
245 250 1.470890 TCGTCTGCATACATGTCGTGA 59.529 47.619 0.00 0.00 0.00 4.35
247 252 2.463876 CATCGTCTGCATACATGTCGT 58.536 47.619 0.00 0.00 0.00 4.34
261 266 1.136690 TGTCGTGACTTTGCATCGTC 58.863 50.000 8.50 8.50 0.00 4.20
276 281 2.255316 GTGTTGTGGTTTGGTTTGTCG 58.745 47.619 0.00 0.00 0.00 4.35
280 285 3.181465 TGTTGTGTGTTGTGGTTTGGTTT 60.181 39.130 0.00 0.00 0.00 3.27
292 297 2.831685 TCCGAGCTATGTTGTGTGTT 57.168 45.000 0.00 0.00 0.00 3.32
314 319 3.429492 TGCTTATGTTTGCCCATTCTCA 58.571 40.909 0.00 0.00 0.00 3.27
315 320 4.176271 GTTGCTTATGTTTGCCCATTCTC 58.824 43.478 0.00 0.00 0.00 2.87
322 327 3.922240 CACAGATGTTGCTTATGTTTGCC 59.078 43.478 0.00 0.00 0.00 4.52
340 345 4.201532 CGACTCTTCTTATTCGTTGCACAG 60.202 45.833 0.00 0.00 0.00 3.66
341 346 3.673338 CGACTCTTCTTATTCGTTGCACA 59.327 43.478 0.00 0.00 0.00 4.57
353 358 1.341531 CCCACTGTGACGACTCTTCTT 59.658 52.381 9.86 0.00 0.00 2.52
356 361 2.822215 ACCCACTGTGACGACTCTT 58.178 52.632 9.86 0.00 0.00 2.85
374 379 1.147191 AGGGGCGATACCTAGTCATCA 59.853 52.381 0.00 0.00 36.32 3.07
375 380 1.819903 GAGGGGCGATACCTAGTCATC 59.180 57.143 0.00 0.00 38.79 2.92
395 400 5.248087 CACGTTCACTTTAATAGCATGTCG 58.752 41.667 0.00 0.00 0.00 4.35
415 420 2.967459 TAGTGAACTTGCAATGCACG 57.033 45.000 7.72 9.17 38.71 5.34
417 422 7.395190 AGATAATTAGTGAACTTGCAATGCA 57.605 32.000 2.72 2.72 36.47 3.96
418 423 9.226345 GTAAGATAATTAGTGAACTTGCAATGC 57.774 33.333 0.00 0.00 0.00 3.56
421 426 8.440059 CACGTAAGATAATTAGTGAACTTGCAA 58.560 33.333 0.00 0.00 43.62 4.08
423 428 6.900299 GCACGTAAGATAATTAGTGAACTTGC 59.100 38.462 4.87 5.81 43.62 4.01
424 429 7.111139 CGCACGTAAGATAATTAGTGAACTTG 58.889 38.462 4.87 0.72 43.62 3.16
425 430 6.237755 GCGCACGTAAGATAATTAGTGAACTT 60.238 38.462 0.30 0.00 43.62 2.66
426 431 5.231568 GCGCACGTAAGATAATTAGTGAACT 59.768 40.000 0.30 0.00 43.62 3.01
427 432 5.421203 GCGCACGTAAGATAATTAGTGAAC 58.579 41.667 0.30 0.00 43.62 3.18
428 433 4.205588 CGCGCACGTAAGATAATTAGTGAA 59.794 41.667 8.75 0.00 43.62 3.18
435 440 2.117137 CTGTCGCGCACGTAAGATAAT 58.883 47.619 8.75 0.00 41.18 1.28
439 444 1.929806 ATCCTGTCGCGCACGTAAGA 61.930 55.000 8.75 0.00 41.18 2.10
450 455 2.887568 GGCTCACGCATCCTGTCG 60.888 66.667 0.00 0.00 38.10 4.35
462 467 2.685106 CCTCTAGGGACTATGGCTCA 57.315 55.000 0.00 0.00 41.70 4.26
484 489 8.321353 AGATTTCAGATTGTGTATGTCTTACCA 58.679 33.333 0.00 0.00 0.00 3.25
508 513 9.679661 TGTATGGATAAAGCAGTGAAATAAAGA 57.320 29.630 0.00 0.00 0.00 2.52
531 536 8.013378 GGAAAGAATTCTTCGAAACGAAATGTA 58.987 33.333 20.71 0.00 45.23 2.29
569 574 8.180706 AGGGAAACGCCTTAACTTTTATTTTA 57.819 30.769 0.00 0.00 36.66 1.52
574 581 4.888823 ACAAGGGAAACGCCTTAACTTTTA 59.111 37.500 0.00 0.00 36.66 1.52
580 587 4.023726 ACATACAAGGGAAACGCCTTAA 57.976 40.909 0.00 0.00 36.66 1.85
585 592 3.636282 ACAAACATACAAGGGAAACGC 57.364 42.857 0.00 0.00 0.00 4.84
672 691 9.447157 CTTTCTCTCTGGATATTTTCTCAGTTT 57.553 33.333 0.00 0.00 0.00 2.66
675 694 7.710475 GGTCTTTCTCTCTGGATATTTTCTCAG 59.290 40.741 0.00 0.00 0.00 3.35
679 698 8.043710 TCTTGGTCTTTCTCTCTGGATATTTTC 58.956 37.037 0.00 0.00 0.00 2.29
713 732 0.916809 GCCCCTGGCCTTTTCTAGTA 59.083 55.000 3.32 0.00 44.06 1.82
715 734 4.666105 GCCCCTGGCCTTTTCTAG 57.334 61.111 3.32 0.00 44.06 2.43
760 779 1.304052 TTCGCCTTTGGGACATGGG 60.304 57.895 0.00 0.00 39.30 4.00
820 839 0.667993 GAGAGAGAGAGGTGCGGATG 59.332 60.000 0.00 0.00 0.00 3.51
821 840 0.550914 AGAGAGAGAGAGGTGCGGAT 59.449 55.000 0.00 0.00 0.00 4.18
822 841 0.107410 GAGAGAGAGAGAGGTGCGGA 60.107 60.000 0.00 0.00 0.00 5.54
825 844 2.171448 AGAGAGAGAGAGAGAGAGGTGC 59.829 54.545 0.00 0.00 0.00 5.01
826 845 4.446371 GAAGAGAGAGAGAGAGAGAGGTG 58.554 52.174 0.00 0.00 0.00 4.00
827 846 3.456277 GGAAGAGAGAGAGAGAGAGAGGT 59.544 52.174 0.00 0.00 0.00 3.85
830 849 3.711704 GGAGGAAGAGAGAGAGAGAGAGA 59.288 52.174 0.00 0.00 0.00 3.10
832 851 3.711704 GAGGAGGAAGAGAGAGAGAGAGA 59.288 52.174 0.00 0.00 0.00 3.10
833 852 3.713764 AGAGGAGGAAGAGAGAGAGAGAG 59.286 52.174 0.00 0.00 0.00 3.20
834 853 3.711704 GAGAGGAGGAAGAGAGAGAGAGA 59.288 52.174 0.00 0.00 0.00 3.10
858 877 1.006519 TGTGGAGAGAGAGAGAAGGGG 59.993 57.143 0.00 0.00 0.00 4.79
860 879 1.742831 CGTGTGGAGAGAGAGAGAAGG 59.257 57.143 0.00 0.00 0.00 3.46
862 881 1.827681 CCGTGTGGAGAGAGAGAGAA 58.172 55.000 0.00 0.00 37.49 2.87
948 968 2.974698 GGGATCGGAATGCAGCGG 60.975 66.667 0.00 0.00 0.00 5.52
952 972 4.908687 CGGCGGGATCGGAATGCA 62.909 66.667 0.00 0.00 36.79 3.96
1113 1139 3.775654 CCGACCACCAGCTCCCTC 61.776 72.222 0.00 0.00 0.00 4.30
1244 1270 3.292492 TTATCTCTCCGCACCTAGACA 57.708 47.619 0.00 0.00 0.00 3.41
1245 1271 4.076394 AGATTATCTCTCCGCACCTAGAC 58.924 47.826 0.00 0.00 0.00 2.59
1287 1313 8.306761 GGACAAGTTAATCATCTCCAAAACAAT 58.693 33.333 0.00 0.00 0.00 2.71
1290 1316 7.308435 CAGGACAAGTTAATCATCTCCAAAAC 58.692 38.462 0.00 0.00 0.00 2.43
1308 1334 0.189574 TTTCCCCCAATGCAGGACAA 59.810 50.000 0.00 0.00 0.00 3.18
1339 1365 1.008995 CAAACAACAAGGGCCGTCG 60.009 57.895 0.00 0.00 0.00 5.12
1361 1387 5.139727 TCCTGTTTCATCCAAAACTGACAT 58.860 37.500 7.64 0.00 39.22 3.06
1365 1391 7.041107 TCTTTTTCCTGTTTCATCCAAAACTG 58.959 34.615 1.73 1.32 39.39 3.16
1368 1394 8.485392 AGATTCTTTTTCCTGTTTCATCCAAAA 58.515 29.630 0.00 0.00 0.00 2.44
1369 1395 8.021898 AGATTCTTTTTCCTGTTTCATCCAAA 57.978 30.769 0.00 0.00 0.00 3.28
1377 1403 4.408596 TGGGCAAGATTCTTTTTCCTGTTT 59.591 37.500 0.00 0.00 0.00 2.83
1389 1415 0.813821 GCAGAACCTGGGCAAGATTC 59.186 55.000 0.00 0.00 31.21 2.52
1429 1459 5.065731 GTGTGACCAGAAGGATCATGAATTC 59.934 44.000 0.00 5.06 38.69 2.17
1453 1483 2.494073 AGTTCTCCTCTTGCTTACGGAG 59.506 50.000 0.00 0.00 43.44 4.63
1510 1542 7.308109 GGTCAATGAACGAGGTGTTAATTAACA 60.308 37.037 23.91 23.91 39.25 2.41
1643 1677 6.767902 ACAGCTTTGTGATCTCTTTAACTCAA 59.232 34.615 0.00 0.00 0.00 3.02
1700 1734 7.544217 CGTTTTCCCACTTTTAATCCTATTTGG 59.456 37.037 0.00 0.00 37.10 3.28
1732 1766 4.881850 CCGCCTTTTGGACTATAACTTGAT 59.118 41.667 0.00 0.00 44.07 2.57
1753 1787 4.037446 TCAATCAAGAAACCCTTTTCACCG 59.963 41.667 0.31 0.00 43.29 4.94
1802 1836 5.868801 CAGGGTAAACAAAGCAAACCATATG 59.131 40.000 0.00 0.00 31.58 1.78
1803 1837 5.568624 GCAGGGTAAACAAAGCAAACCATAT 60.569 40.000 0.00 0.00 31.58 1.78
1807 1841 2.159028 TGCAGGGTAAACAAAGCAAACC 60.159 45.455 0.00 0.00 0.00 3.27
1808 1842 2.863740 GTGCAGGGTAAACAAAGCAAAC 59.136 45.455 0.00 0.00 33.37 2.93
1810 1844 1.066303 CGTGCAGGGTAAACAAAGCAA 59.934 47.619 0.00 0.00 33.37 3.91
1939 1973 7.664082 TGAGACTCTGATTCTTTGATTGAAC 57.336 36.000 3.68 0.00 0.00 3.18
1949 1983 9.956640 ATTCTACAAAAATGAGACTCTGATTCT 57.043 29.630 3.68 0.00 0.00 2.40
1955 1989 9.512588 ACAATGATTCTACAAAAATGAGACTCT 57.487 29.630 3.68 0.00 0.00 3.24
1983 2017 7.386059 TGAATAGACTAATTTCAGTCAGTGCA 58.614 34.615 10.31 1.79 46.15 4.57
2126 2160 6.781507 AGGGATCTACTTAAGTTACGGCTTAT 59.218 38.462 14.49 0.00 31.83 1.73
2130 2164 4.340381 TCAGGGATCTACTTAAGTTACGGC 59.660 45.833 14.49 0.40 0.00 5.68
2137 2171 8.251383 TGGATTAGTTCAGGGATCTACTTAAG 57.749 38.462 0.00 0.00 0.00 1.85
2173 2207 3.968649 TGTCAAAACAGAGCATTTCAGC 58.031 40.909 0.00 0.00 0.00 4.26
2246 2280 1.798223 CATACACACTTGGTCACACCG 59.202 52.381 0.00 0.00 42.58 4.94
2337 2371 8.237267 AGTAATAAACTGAGCATTTAACTGCAC 58.763 33.333 18.69 13.32 39.90 4.57
2346 2380 5.393461 GCTGCCAAGTAATAAACTGAGCATT 60.393 40.000 0.00 0.00 42.79 3.56
2487 2526 7.784037 TGATTTGCATGATAAAAGGTAATGCT 58.216 30.769 0.00 0.00 43.17 3.79
2524 2564 5.008613 TGAATTTTTAGTCCACACTGAGCAC 59.991 40.000 0.00 0.00 33.62 4.40
2644 2692 1.270550 GTGCCCAGACAACAGAAATGG 59.729 52.381 0.00 0.00 0.00 3.16
3013 3066 9.660180 GGAAATCTCAGAGAACAGTACTAAAAT 57.340 33.333 3.63 0.00 0.00 1.82
3312 3369 3.194005 ACAGTAACTTCTGGGTGTGTG 57.806 47.619 0.00 0.00 39.48 3.82
3483 3540 4.978083 AGGCAAGTGAATTTCTGCATAG 57.022 40.909 10.24 0.00 0.00 2.23
3487 3544 4.446719 CAGAAAAGGCAAGTGAATTTCTGC 59.553 41.667 12.04 0.00 45.52 4.26
3650 3707 2.652382 TTCACGTCGGCCAAGCTTCA 62.652 55.000 2.24 0.00 0.00 3.02
3651 3708 1.959226 TTCACGTCGGCCAAGCTTC 60.959 57.895 2.24 0.00 0.00 3.86
3652 3709 2.110213 TTCACGTCGGCCAAGCTT 59.890 55.556 2.24 0.00 0.00 3.74
3653 3710 2.665185 GTTCACGTCGGCCAAGCT 60.665 61.111 2.24 0.00 0.00 3.74
3654 3711 3.723348 GGTTCACGTCGGCCAAGC 61.723 66.667 2.24 0.00 0.00 4.01
3655 3712 3.047877 GGGTTCACGTCGGCCAAG 61.048 66.667 2.24 0.00 0.00 3.61
3661 3721 2.165845 AGAGGATAAAGGGTTCACGTCG 59.834 50.000 0.00 0.00 0.00 5.12
3678 3738 5.446473 GCGTGACAAAAGATATGACAAGAGG 60.446 44.000 0.00 0.00 0.00 3.69
3713 3785 3.290710 ACAAGCTTCAACAGTCATTGGT 58.709 40.909 0.00 0.00 0.00 3.67
3714 3786 3.996150 ACAAGCTTCAACAGTCATTGG 57.004 42.857 0.00 0.00 0.00 3.16
3715 3787 6.072286 AGGATAACAAGCTTCAACAGTCATTG 60.072 38.462 0.00 0.00 0.00 2.82
3716 3788 6.006449 AGGATAACAAGCTTCAACAGTCATT 58.994 36.000 0.00 0.00 0.00 2.57
3717 3789 5.564550 AGGATAACAAGCTTCAACAGTCAT 58.435 37.500 0.00 0.00 0.00 3.06
3718 3790 4.973168 AGGATAACAAGCTTCAACAGTCA 58.027 39.130 0.00 0.00 0.00 3.41
3719 3791 5.948992 AAGGATAACAAGCTTCAACAGTC 57.051 39.130 0.00 0.00 0.00 3.51
3786 3879 6.422776 TTCGATGGAAGCAGATAAAAGTTC 57.577 37.500 0.00 0.00 0.00 3.01
3802 3895 2.684881 CAGTGGAGGGAATTTTCGATGG 59.315 50.000 0.00 0.00 0.00 3.51
3931 4216 5.897050 GACAATGGGTCTGTGTTAACAAAA 58.103 37.500 10.51 0.77 43.46 2.44
4024 4309 7.327032 GTGCTTTATGGTAGCTGAAAAGAAAAG 59.673 37.037 14.30 0.00 39.38 2.27
4027 4312 6.003950 AGTGCTTTATGGTAGCTGAAAAGAA 58.996 36.000 14.30 5.18 39.38 2.52
4046 4331 9.726438 AATTTTGTTTCTATAGTACAGAGTGCT 57.274 29.630 0.00 0.00 32.46 4.40
4128 4413 8.165239 TCTAGCATGTACAAAATTTTCACACT 57.835 30.769 14.17 11.24 0.00 3.55
4129 4414 7.061094 GCTCTAGCATGTACAAAATTTTCACAC 59.939 37.037 14.17 7.69 41.59 3.82
4156 4441 5.357742 AAAGGCTGGAAAATGAACACTTT 57.642 34.783 0.00 0.00 0.00 2.66
4199 4486 9.423061 CTAACATGACAATCATATGAACCGATA 57.577 33.333 9.99 0.00 34.28 2.92
4323 4741 5.529289 AGGTTACATGGAGAAGACCTGATA 58.471 41.667 0.00 0.00 36.23 2.15
4326 4744 5.677319 TTAGGTTACATGGAGAAGACCTG 57.323 43.478 9.03 0.00 37.98 4.00
4380 4800 9.013490 CATACAAAAAGCATAGCAATGTCTAAC 57.987 33.333 0.00 0.00 35.38 2.34
4417 4837 6.270231 ACAGAAAATCCTACAGACACCTTAGT 59.730 38.462 0.00 0.00 0.00 2.24
4475 4895 1.679311 AGCACTGATTCCGGCTCAA 59.321 52.632 0.00 0.00 28.71 3.02
4490 4910 2.250924 TCTCATCCAGAACACAGAGCA 58.749 47.619 0.00 0.00 0.00 4.26
4491 4911 3.540314 ATCTCATCCAGAACACAGAGC 57.460 47.619 0.00 0.00 33.62 4.09
4492 4912 6.867816 GCTTATATCTCATCCAGAACACAGAG 59.132 42.308 0.00 0.00 33.62 3.35
4495 4915 6.484364 TGCTTATATCTCATCCAGAACACA 57.516 37.500 0.00 0.00 33.62 3.72
4555 4977 4.101430 TGACTGCTGACATAATATCTGGCA 59.899 41.667 0.00 0.00 0.00 4.92
4573 4995 0.322975 CAGGGGGAACTCACTGACTG 59.677 60.000 0.00 0.00 32.86 3.51
4578 5000 2.344093 ACATACAGGGGGAACTCACT 57.656 50.000 0.00 0.00 0.00 3.41
4587 5009 2.620115 GCATGATGTGAACATACAGGGG 59.380 50.000 0.00 0.00 36.57 4.79
4647 5069 3.117474 TGGATTTGGGTGTGTTTGTAGGA 60.117 43.478 0.00 0.00 0.00 2.94
4655 5077 2.151502 TTGTGTGGATTTGGGTGTGT 57.848 45.000 0.00 0.00 0.00 3.72
4693 5142 2.100087 TGCGTCTGTGTCAGTTTCTGTA 59.900 45.455 0.00 0.00 32.61 2.74
4704 5153 1.784525 GTAAGCTTCTGCGTCTGTGT 58.215 50.000 0.00 0.00 45.42 3.72
4711 5160 2.167861 GCCCTCGTAAGCTTCTGCG 61.168 63.158 0.00 6.96 45.42 5.18
4791 5240 2.171870 AGCCTAGAGACGTAGAGAGCTT 59.828 50.000 0.00 0.00 0.00 3.74
4798 5247 1.310904 GGTGGAGCCTAGAGACGTAG 58.689 60.000 0.00 0.00 0.00 3.51
4802 5251 1.681486 GCAGGGTGGAGCCTAGAGAC 61.681 65.000 0.00 0.00 37.43 3.36
4818 5267 2.037136 CCTTCTGTTCAGGCCGCAG 61.037 63.158 0.00 5.19 0.00 5.18
4828 5277 1.952296 CAAACTGCTGCTCCTTCTGTT 59.048 47.619 0.00 0.00 0.00 3.16
4876 5325 5.765677 TGTCAAACATTCTCGGGATAAACAA 59.234 36.000 0.00 0.00 0.00 2.83
4915 5364 1.049402 TGACACGTGGGGTTGACATA 58.951 50.000 21.57 0.00 0.00 2.29
4954 5407 7.275999 CGATCCAGGTTAAGAGAAAAAGTAGAC 59.724 40.741 0.00 0.00 0.00 2.59
4955 5408 7.039223 ACGATCCAGGTTAAGAGAAAAAGTAGA 60.039 37.037 0.00 0.00 0.00 2.59
4956 5409 7.097834 ACGATCCAGGTTAAGAGAAAAAGTAG 58.902 38.462 0.00 0.00 0.00 2.57
4957 5410 7.001099 ACGATCCAGGTTAAGAGAAAAAGTA 57.999 36.000 0.00 0.00 0.00 2.24
4958 5411 5.866207 ACGATCCAGGTTAAGAGAAAAAGT 58.134 37.500 0.00 0.00 0.00 2.66
4959 5412 6.313164 GGTACGATCCAGGTTAAGAGAAAAAG 59.687 42.308 0.00 0.00 0.00 2.27
4978 5431 1.139256 TGTGCTTTGAACCAGGTACGA 59.861 47.619 0.00 0.00 0.00 3.43
4979 5432 1.588674 TGTGCTTTGAACCAGGTACG 58.411 50.000 0.00 0.00 0.00 3.67
5033 5486 4.782019 TTTCAAGTTGCGCCATCTAAAT 57.218 36.364 4.18 0.00 0.00 1.40
5050 5503 5.945784 AGCAGGCATTGAGTAACTAATTTCA 59.054 36.000 0.00 0.00 0.00 2.69
5185 5643 3.033184 ACAGACCCCAATAATGCCAATG 58.967 45.455 0.00 0.00 0.00 2.82
5196 5654 3.140144 AGGAGATTCAAAACAGACCCCAA 59.860 43.478 0.00 0.00 0.00 4.12
5210 5668 5.397142 AAAGACAATTTGCCAGGAGATTC 57.603 39.130 0.00 0.00 0.00 2.52
5224 5682 4.613437 ACAGGCCATATTGGAAAGACAAT 58.387 39.130 5.01 0.00 40.96 2.71
5550 6008 1.006832 CTCCGGCGTTATTTGACAGG 58.993 55.000 6.01 0.00 0.00 4.00
5655 6113 4.202367 ACTGTAAGACAAGAGAACCCAAGG 60.202 45.833 0.00 0.00 37.43 3.61
5704 6162 9.462174 TTCACAAATGTACATTCTGAAATCAAC 57.538 29.630 25.36 0.00 30.65 3.18
5717 6175 9.509855 GTAAAAACATCAGTTCACAAATGTACA 57.490 29.630 0.00 0.00 36.84 2.90
5728 6186 9.571810 TGATGCAATATGTAAAAACATCAGTTC 57.428 29.630 0.00 0.00 37.95 3.01
5840 6298 5.855740 TCATATGGCATCAAATGAAGCAA 57.144 34.783 1.65 1.69 40.21 3.91
6022 6480 5.185828 TCATAAGCAGAAGACAGCTCAACTA 59.814 40.000 0.00 0.00 37.88 2.24
6106 6763 8.887717 CCAAAGTAAGATTCTGTTAATCCAGAG 58.112 37.037 0.00 0.00 42.16 3.35
6116 6773 5.690865 TGGTTGACCAAAGTAAGATTCTGT 58.309 37.500 0.00 0.00 44.35 3.41
6136 6793 3.312736 AGGAACCATGTGACTTTTGGT 57.687 42.857 0.00 0.64 45.54 3.67
6302 6962 7.837863 TCGTCTGAGGAATTTCTAATACTTGT 58.162 34.615 0.00 0.00 0.00 3.16
6429 7094 1.076850 TCACCCGACGTATAGCCCA 60.077 57.895 0.00 0.00 0.00 5.36
6439 7104 1.889530 CTCTTCACCCCTCACCCGAC 61.890 65.000 0.00 0.00 0.00 4.79
6445 7110 0.612174 CCTCGACTCTTCACCCCTCA 60.612 60.000 0.00 0.00 0.00 3.86
6464 7129 1.376037 CAGAGGGAAGTTGGTCGGC 60.376 63.158 0.00 0.00 0.00 5.54
6525 7190 5.311265 TCCTCCTGATATGCACATTCATTC 58.689 41.667 0.00 0.00 0.00 2.67
6561 7226 3.766591 CCAACTCTACCACAGATGAGACT 59.233 47.826 0.00 0.00 31.13 3.24
6562 7227 3.118956 CCCAACTCTACCACAGATGAGAC 60.119 52.174 0.00 0.00 31.13 3.36
6677 7345 3.552273 GCTAGGCCGAACGAGATTATTCA 60.552 47.826 0.00 0.00 0.00 2.57
6728 7396 3.054875 TGAGATTTCTGGGACACCTGATG 60.055 47.826 0.00 0.00 43.25 3.07
6729 7397 3.184628 TGAGATTTCTGGGACACCTGAT 58.815 45.455 0.00 0.00 43.25 2.90
6730 7398 2.619931 TGAGATTTCTGGGACACCTGA 58.380 47.619 0.00 0.00 42.25 3.86
6731 7399 3.423539 TTGAGATTTCTGGGACACCTG 57.576 47.619 0.00 0.00 37.76 4.00
6732 7400 3.395941 ACTTTGAGATTTCTGGGACACCT 59.604 43.478 0.00 0.00 37.76 4.00
6733 7401 3.756117 ACTTTGAGATTTCTGGGACACC 58.244 45.455 0.00 0.00 37.24 4.16
6734 7402 6.431234 ACATAACTTTGAGATTTCTGGGACAC 59.569 38.462 0.00 0.00 0.00 3.67
6735 7403 6.542821 ACATAACTTTGAGATTTCTGGGACA 58.457 36.000 0.00 0.00 0.00 4.02
6736 7404 8.041323 TCTACATAACTTTGAGATTTCTGGGAC 58.959 37.037 0.00 0.00 0.00 4.46
6737 7405 8.146053 TCTACATAACTTTGAGATTTCTGGGA 57.854 34.615 0.00 0.00 0.00 4.37
6738 7406 8.669243 GTTCTACATAACTTTGAGATTTCTGGG 58.331 37.037 0.00 0.00 0.00 4.45
6739 7407 9.219603 TGTTCTACATAACTTTGAGATTTCTGG 57.780 33.333 0.00 0.00 0.00 3.86
6744 7412 9.739276 TGGATTGTTCTACATAACTTTGAGATT 57.261 29.630 0.00 0.00 0.00 2.40
6745 7413 9.167311 GTGGATTGTTCTACATAACTTTGAGAT 57.833 33.333 0.00 0.00 33.77 2.75
6746 7414 7.330946 CGTGGATTGTTCTACATAACTTTGAGA 59.669 37.037 0.00 0.00 33.19 3.27
6747 7415 7.456253 CGTGGATTGTTCTACATAACTTTGAG 58.544 38.462 0.00 0.00 33.19 3.02
6748 7416 6.128391 GCGTGGATTGTTCTACATAACTTTGA 60.128 38.462 0.00 0.00 33.19 2.69
6749 7417 6.021596 GCGTGGATTGTTCTACATAACTTTG 58.978 40.000 0.00 0.00 33.19 2.77
6750 7418 5.703592 TGCGTGGATTGTTCTACATAACTTT 59.296 36.000 0.00 0.00 33.19 2.66
6751 7419 5.242434 TGCGTGGATTGTTCTACATAACTT 58.758 37.500 0.00 0.00 33.19 2.66
6752 7420 4.827692 TGCGTGGATTGTTCTACATAACT 58.172 39.130 0.00 0.00 33.19 2.24
6753 7421 5.539582 TTGCGTGGATTGTTCTACATAAC 57.460 39.130 0.00 0.00 33.19 1.89
6754 7422 8.445275 AATATTGCGTGGATTGTTCTACATAA 57.555 30.769 0.00 0.00 33.19 1.90
6755 7423 8.445275 AAATATTGCGTGGATTGTTCTACATA 57.555 30.769 0.00 0.00 33.19 2.29
6756 7424 6.942532 AATATTGCGTGGATTGTTCTACAT 57.057 33.333 0.00 0.00 33.19 2.29
6757 7425 6.183360 GGAAATATTGCGTGGATTGTTCTACA 60.183 38.462 0.00 0.00 33.19 2.74
6758 7426 6.199393 GGAAATATTGCGTGGATTGTTCTAC 58.801 40.000 0.00 0.00 0.00 2.59
6759 7427 5.298276 GGGAAATATTGCGTGGATTGTTCTA 59.702 40.000 0.00 0.00 0.00 2.10
6760 7428 4.097892 GGGAAATATTGCGTGGATTGTTCT 59.902 41.667 0.00 0.00 0.00 3.01
6761 7429 4.097892 AGGGAAATATTGCGTGGATTGTTC 59.902 41.667 0.00 0.00 0.00 3.18
6762 7430 4.023291 AGGGAAATATTGCGTGGATTGTT 58.977 39.130 0.00 0.00 0.00 2.83
6763 7431 3.381272 CAGGGAAATATTGCGTGGATTGT 59.619 43.478 0.00 0.00 33.95 2.71
6764 7432 3.796504 GCAGGGAAATATTGCGTGGATTG 60.797 47.826 6.46 0.00 37.36 2.67
6765 7433 2.362077 GCAGGGAAATATTGCGTGGATT 59.638 45.455 6.46 0.00 37.36 3.01
6766 7434 1.956477 GCAGGGAAATATTGCGTGGAT 59.044 47.619 6.46 0.00 37.36 3.41
6767 7435 1.064758 AGCAGGGAAATATTGCGTGGA 60.065 47.619 6.46 0.00 42.47 4.02
6768 7436 1.066002 CAGCAGGGAAATATTGCGTGG 59.934 52.381 6.46 0.00 42.47 4.94
6769 7437 2.016318 TCAGCAGGGAAATATTGCGTG 58.984 47.619 0.00 0.76 42.47 5.34
6770 7438 2.017049 GTCAGCAGGGAAATATTGCGT 58.983 47.619 0.00 0.00 42.47 5.24
6771 7439 1.003545 CGTCAGCAGGGAAATATTGCG 60.004 52.381 0.00 0.00 42.47 4.85
6772 7440 2.017049 ACGTCAGCAGGGAAATATTGC 58.983 47.619 0.00 0.00 38.09 3.56
6773 7441 3.009723 ACACGTCAGCAGGGAAATATTG 58.990 45.455 0.00 0.00 0.00 1.90
6774 7442 3.009723 CACACGTCAGCAGGGAAATATT 58.990 45.455 0.00 0.00 0.00 1.28
6775 7443 2.632377 CACACGTCAGCAGGGAAATAT 58.368 47.619 0.00 0.00 0.00 1.28
6776 7444 1.338674 CCACACGTCAGCAGGGAAATA 60.339 52.381 0.00 0.00 0.00 1.40
6777 7445 0.606401 CCACACGTCAGCAGGGAAAT 60.606 55.000 0.00 0.00 0.00 2.17
6778 7446 1.227823 CCACACGTCAGCAGGGAAA 60.228 57.895 0.00 0.00 0.00 3.13
6779 7447 1.978455 AACCACACGTCAGCAGGGAA 61.978 55.000 0.00 0.00 0.00 3.97
6780 7448 2.439960 AACCACACGTCAGCAGGGA 61.440 57.895 0.00 0.00 0.00 4.20
6781 7449 2.111043 AACCACACGTCAGCAGGG 59.889 61.111 0.00 0.00 0.00 4.45
6782 7450 1.523711 ACAACCACACGTCAGCAGG 60.524 57.895 0.00 0.00 0.00 4.85
6783 7451 1.643292 CACAACCACACGTCAGCAG 59.357 57.895 0.00 0.00 0.00 4.24
6784 7452 2.468670 GCACAACCACACGTCAGCA 61.469 57.895 0.00 0.00 0.00 4.41
6785 7453 2.327940 GCACAACCACACGTCAGC 59.672 61.111 0.00 0.00 0.00 4.26
6786 7454 1.089481 AGTGCACAACCACACGTCAG 61.089 55.000 21.04 0.00 41.72 3.51
6787 7455 1.078778 AGTGCACAACCACACGTCA 60.079 52.632 21.04 0.00 41.72 4.35
6788 7456 1.351707 CAGTGCACAACCACACGTC 59.648 57.895 21.04 0.00 41.72 4.34
6789 7457 2.112198 CCAGTGCACAACCACACGT 61.112 57.895 21.04 0.00 41.72 4.49
6790 7458 2.715005 CCAGTGCACAACCACACG 59.285 61.111 21.04 0.00 41.72 4.49
6791 7459 2.412937 GCCAGTGCACAACCACAC 59.587 61.111 21.04 0.00 38.18 3.82
6792 7460 3.208383 CGCCAGTGCACAACCACA 61.208 61.111 21.04 0.00 38.18 4.17
6793 7461 3.964875 CCGCCAGTGCACAACCAC 61.965 66.667 21.04 2.42 37.32 4.16
6794 7462 4.182433 TCCGCCAGTGCACAACCA 62.182 61.111 21.04 0.00 37.32 3.67
6795 7463 3.357079 CTCCGCCAGTGCACAACC 61.357 66.667 21.04 5.08 37.32 3.77
6796 7464 3.357079 CCTCCGCCAGTGCACAAC 61.357 66.667 21.04 6.66 37.32 3.32
6797 7465 3.825160 GACCTCCGCCAGTGCACAA 62.825 63.158 21.04 0.00 37.32 3.33
6798 7466 4.314440 GACCTCCGCCAGTGCACA 62.314 66.667 21.04 0.00 37.32 4.57
6799 7467 3.537206 AAGACCTCCGCCAGTGCAC 62.537 63.158 9.40 9.40 37.32 4.57
6800 7468 3.241530 AAGACCTCCGCCAGTGCA 61.242 61.111 0.00 0.00 37.32 4.57
6801 7469 2.743928 CAAGACCTCCGCCAGTGC 60.744 66.667 0.00 0.00 0.00 4.40
6802 7470 2.046892 CCAAGACCTCCGCCAGTG 60.047 66.667 0.00 0.00 0.00 3.66
6803 7471 4.021925 GCCAAGACCTCCGCCAGT 62.022 66.667 0.00 0.00 0.00 4.00
6804 7472 1.899437 TTAGCCAAGACCTCCGCCAG 61.899 60.000 0.00 0.00 0.00 4.85
6805 7473 1.485294 TTTAGCCAAGACCTCCGCCA 61.485 55.000 0.00 0.00 0.00 5.69
6806 7474 0.322187 TTTTAGCCAAGACCTCCGCC 60.322 55.000 0.00 0.00 0.00 6.13
6807 7475 0.803117 GTTTTAGCCAAGACCTCCGC 59.197 55.000 0.00 0.00 0.00 5.54
6808 7476 1.076332 CGTTTTAGCCAAGACCTCCG 58.924 55.000 0.00 0.00 0.00 4.63
6809 7477 0.803117 GCGTTTTAGCCAAGACCTCC 59.197 55.000 0.00 0.00 0.00 4.30
6819 7487 1.847890 TTGCAGGTCGGCGTTTTAGC 61.848 55.000 6.85 6.96 36.28 3.09
6820 7488 0.110373 GTTGCAGGTCGGCGTTTTAG 60.110 55.000 6.85 0.00 36.28 1.85
6821 7489 0.814410 TGTTGCAGGTCGGCGTTTTA 60.814 50.000 6.85 0.00 36.28 1.52
6822 7490 1.452145 ATGTTGCAGGTCGGCGTTTT 61.452 50.000 6.85 0.00 36.28 2.43
6823 7491 1.896660 ATGTTGCAGGTCGGCGTTT 60.897 52.632 6.85 0.00 36.28 3.60
6824 7492 2.281484 ATGTTGCAGGTCGGCGTT 60.281 55.556 6.85 0.00 36.28 4.84
6825 7493 3.049674 CATGTTGCAGGTCGGCGT 61.050 61.111 6.85 0.00 36.28 5.68
6826 7494 3.803082 CCATGTTGCAGGTCGGCG 61.803 66.667 0.00 0.00 36.28 6.46
6827 7495 4.120331 GCCATGTTGCAGGTCGGC 62.120 66.667 3.88 3.88 0.00 5.54
6828 7496 3.443045 GGCCATGTTGCAGGTCGG 61.443 66.667 0.00 0.00 0.00 4.79
6841 7509 4.912395 AGCAAAGCAACCCGGCCA 62.912 61.111 2.24 0.00 0.00 5.36
6966 7634 2.156098 ACCAGGGAAGCTTCAGGCA 61.156 57.895 27.02 0.00 44.79 4.75
6968 7636 0.622665 ATCACCAGGGAAGCTTCAGG 59.377 55.000 27.02 24.57 0.00 3.86
6969 7637 2.739932 CGTATCACCAGGGAAGCTTCAG 60.740 54.545 27.02 15.75 0.00 3.02
6979 7647 2.028476 TCTGAAACACCGTATCACCAGG 60.028 50.000 0.00 0.00 0.00 4.45
6980 7648 3.313012 TCTGAAACACCGTATCACCAG 57.687 47.619 0.00 0.00 0.00 4.00
6988 7656 4.002906 ACATACACATCTGAAACACCGT 57.997 40.909 0.00 0.00 0.00 4.83
6989 7657 5.288712 GTCTACATACACATCTGAAACACCG 59.711 44.000 0.00 0.00 0.00 4.94
6990 7658 6.398918 AGTCTACATACACATCTGAAACACC 58.601 40.000 0.00 0.00 0.00 4.16
7010 7678 9.535878 GTCAGCTAGCTAAATTTGTTATAGTCT 57.464 33.333 18.86 0.00 0.00 3.24
7011 7679 8.766151 GGTCAGCTAGCTAAATTTGTTATAGTC 58.234 37.037 18.86 0.00 0.00 2.59
7012 7680 8.487028 AGGTCAGCTAGCTAAATTTGTTATAGT 58.513 33.333 18.86 0.00 32.98 2.12
7013 7681 8.894768 AGGTCAGCTAGCTAAATTTGTTATAG 57.105 34.615 18.86 0.00 32.98 1.31
7014 7682 8.705594 AGAGGTCAGCTAGCTAAATTTGTTATA 58.294 33.333 18.86 0.00 35.60 0.98
7015 7683 7.569240 AGAGGTCAGCTAGCTAAATTTGTTAT 58.431 34.615 18.86 0.00 35.60 1.89
7020 7692 6.540551 GCTTAAGAGGTCAGCTAGCTAAATTT 59.459 38.462 18.86 9.82 35.60 1.82
7036 7708 3.614092 ACACATGGACATGCTTAAGAGG 58.386 45.455 6.67 0.00 42.39 3.69
7042 7714 2.083774 CGGTTACACATGGACATGCTT 58.916 47.619 11.96 2.35 42.39 3.91
7058 7737 5.613329 TCTCACCAAATAACACTTACGGTT 58.387 37.500 0.00 0.00 0.00 4.44
7064 7743 5.565439 GCTTGCATCTCACCAAATAACACTT 60.565 40.000 0.00 0.00 0.00 3.16
7068 7747 3.429085 CGCTTGCATCTCACCAAATAAC 58.571 45.455 0.00 0.00 0.00 1.89
7072 7751 0.250684 TCCGCTTGCATCTCACCAAA 60.251 50.000 0.00 0.00 0.00 3.28
7077 7756 0.674581 CCAGTTCCGCTTGCATCTCA 60.675 55.000 0.00 0.00 0.00 3.27
7078 7757 1.986575 GCCAGTTCCGCTTGCATCTC 61.987 60.000 0.00 0.00 36.05 2.75
7079 7758 2.042831 GCCAGTTCCGCTTGCATCT 61.043 57.895 0.00 0.00 36.05 2.90
7080 7759 2.042831 AGCCAGTTCCGCTTGCATC 61.043 57.895 0.00 0.00 38.23 3.91
7081 7760 2.034687 AGCCAGTTCCGCTTGCAT 59.965 55.556 0.00 0.00 38.23 3.96
7082 7761 2.979676 CAGCCAGTTCCGCTTGCA 60.980 61.111 0.00 0.00 38.23 4.08
7083 7762 3.741476 CCAGCCAGTTCCGCTTGC 61.741 66.667 0.00 0.00 36.23 4.01
7084 7763 3.741476 GCCAGCCAGTTCCGCTTG 61.741 66.667 0.00 0.00 33.17 4.01
7085 7764 4.269523 TGCCAGCCAGTTCCGCTT 62.270 61.111 0.00 0.00 33.17 4.68
7086 7765 4.711949 CTGCCAGCCAGTTCCGCT 62.712 66.667 0.00 0.00 36.79 5.52
7087 7766 4.704833 TCTGCCAGCCAGTTCCGC 62.705 66.667 0.00 0.00 42.38 5.54
7088 7767 2.743928 GTCTGCCAGCCAGTTCCG 60.744 66.667 0.00 0.00 42.38 4.30
7089 7768 0.610232 ATTGTCTGCCAGCCAGTTCC 60.610 55.000 0.00 0.00 42.38 3.62
7090 7769 0.524862 CATTGTCTGCCAGCCAGTTC 59.475 55.000 0.00 0.00 42.38 3.01
7091 7770 1.530013 GCATTGTCTGCCAGCCAGTT 61.530 55.000 0.00 0.00 45.66 3.16
7092 7771 1.975407 GCATTGTCTGCCAGCCAGT 60.975 57.895 0.00 0.00 45.66 4.00
7093 7772 2.882876 GCATTGTCTGCCAGCCAG 59.117 61.111 0.00 0.00 45.66 4.85
7101 7780 5.412594 ACAAGTAACACTATGGCATTGTCTG 59.587 40.000 11.64 4.96 0.00 3.51
7102 7781 5.560724 ACAAGTAACACTATGGCATTGTCT 58.439 37.500 11.64 3.67 0.00 3.41
7103 7782 5.880054 ACAAGTAACACTATGGCATTGTC 57.120 39.130 11.64 1.38 0.00 3.18
7104 7783 6.264292 TGAAACAAGTAACACTATGGCATTGT 59.736 34.615 4.78 7.10 0.00 2.71
7105 7784 6.676950 TGAAACAAGTAACACTATGGCATTG 58.323 36.000 4.78 6.29 0.00 2.82
7106 7785 6.490040 ACTGAAACAAGTAACACTATGGCATT 59.510 34.615 4.78 0.00 0.00 3.56
7107 7786 6.003950 ACTGAAACAAGTAACACTATGGCAT 58.996 36.000 4.88 4.88 0.00 4.40
7108 7787 5.373222 ACTGAAACAAGTAACACTATGGCA 58.627 37.500 0.00 0.00 0.00 4.92
7109 7788 5.941948 ACTGAAACAAGTAACACTATGGC 57.058 39.130 0.00 0.00 0.00 4.40
7110 7789 9.878599 CTAAAACTGAAACAAGTAACACTATGG 57.121 33.333 0.00 0.00 0.00 2.74
7111 7790 9.878599 CCTAAAACTGAAACAAGTAACACTATG 57.121 33.333 0.00 0.00 0.00 2.23
7112 7791 8.565416 GCCTAAAACTGAAACAAGTAACACTAT 58.435 33.333 0.00 0.00 0.00 2.12
7113 7792 7.553402 TGCCTAAAACTGAAACAAGTAACACTA 59.447 33.333 0.00 0.00 0.00 2.74
7114 7793 6.376018 TGCCTAAAACTGAAACAAGTAACACT 59.624 34.615 0.00 0.00 0.00 3.55
7115 7794 6.557110 TGCCTAAAACTGAAACAAGTAACAC 58.443 36.000 0.00 0.00 0.00 3.32
7116 7795 6.761099 TGCCTAAAACTGAAACAAGTAACA 57.239 33.333 0.00 0.00 0.00 2.41
7117 7796 7.220108 CACTTGCCTAAAACTGAAACAAGTAAC 59.780 37.037 5.28 0.00 43.06 2.50
7118 7797 7.121463 TCACTTGCCTAAAACTGAAACAAGTAA 59.879 33.333 5.28 0.00 43.06 2.24
7119 7798 6.600032 TCACTTGCCTAAAACTGAAACAAGTA 59.400 34.615 5.28 0.00 43.06 2.24
7120 7799 5.417580 TCACTTGCCTAAAACTGAAACAAGT 59.582 36.000 0.00 0.00 45.08 3.16
7121 7800 5.890334 TCACTTGCCTAAAACTGAAACAAG 58.110 37.500 0.00 0.00 39.09 3.16
7122 7801 5.906113 TCACTTGCCTAAAACTGAAACAA 57.094 34.783 0.00 0.00 0.00 2.83
7123 7802 5.592282 TCATCACTTGCCTAAAACTGAAACA 59.408 36.000 0.00 0.00 0.00 2.83
7124 7803 5.915196 GTCATCACTTGCCTAAAACTGAAAC 59.085 40.000 0.00 0.00 0.00 2.78
7125 7804 5.592282 TGTCATCACTTGCCTAAAACTGAAA 59.408 36.000 0.00 0.00 0.00 2.69
7126 7805 5.129634 TGTCATCACTTGCCTAAAACTGAA 58.870 37.500 0.00 0.00 0.00 3.02
7127 7806 4.713553 TGTCATCACTTGCCTAAAACTGA 58.286 39.130 0.00 0.00 0.00 3.41
7128 7807 5.437289 TTGTCATCACTTGCCTAAAACTG 57.563 39.130 0.00 0.00 0.00 3.16
7129 7808 6.655078 ATTTGTCATCACTTGCCTAAAACT 57.345 33.333 0.00 0.00 0.00 2.66
7130 7809 8.863049 CATAATTTGTCATCACTTGCCTAAAAC 58.137 33.333 0.00 0.00 0.00 2.43
7131 7810 8.034215 CCATAATTTGTCATCACTTGCCTAAAA 58.966 33.333 0.00 0.00 0.00 1.52
7132 7811 7.395772 TCCATAATTTGTCATCACTTGCCTAAA 59.604 33.333 0.00 0.00 0.00 1.85
7133 7812 6.889177 TCCATAATTTGTCATCACTTGCCTAA 59.111 34.615 0.00 0.00 0.00 2.69
7134 7813 6.318648 GTCCATAATTTGTCATCACTTGCCTA 59.681 38.462 0.00 0.00 0.00 3.93
7135 7814 5.126061 GTCCATAATTTGTCATCACTTGCCT 59.874 40.000 0.00 0.00 0.00 4.75
7136 7815 5.126061 AGTCCATAATTTGTCATCACTTGCC 59.874 40.000 0.00 0.00 0.00 4.52
7137 7816 6.199937 AGTCCATAATTTGTCATCACTTGC 57.800 37.500 0.00 0.00 0.00 4.01
7152 7831 9.104965 CCACGAAACTCATAAATTAGTCCATAA 57.895 33.333 0.00 0.00 0.00 1.90
7153 7832 7.713507 CCCACGAAACTCATAAATTAGTCCATA 59.286 37.037 0.00 0.00 0.00 2.74
7154 7833 6.542370 CCCACGAAACTCATAAATTAGTCCAT 59.458 38.462 0.00 0.00 0.00 3.41
7155 7834 5.878116 CCCACGAAACTCATAAATTAGTCCA 59.122 40.000 0.00 0.00 0.00 4.02
7156 7835 5.296035 CCCCACGAAACTCATAAATTAGTCC 59.704 44.000 0.00 0.00 0.00 3.85
7157 7836 6.036844 GTCCCCACGAAACTCATAAATTAGTC 59.963 42.308 0.00 0.00 0.00 2.59
7158 7837 5.878669 GTCCCCACGAAACTCATAAATTAGT 59.121 40.000 0.00 0.00 0.00 2.24
7159 7838 6.359480 GTCCCCACGAAACTCATAAATTAG 57.641 41.667 0.00 0.00 0.00 1.73
7175 7854 1.674322 CATCCCACAACGTCCCCAC 60.674 63.158 0.00 0.00 0.00 4.61
7176 7855 2.753701 CATCCCACAACGTCCCCA 59.246 61.111 0.00 0.00 0.00 4.96
7177 7856 2.750237 GCATCCCACAACGTCCCC 60.750 66.667 0.00 0.00 0.00 4.81
7178 7857 2.750237 GGCATCCCACAACGTCCC 60.750 66.667 0.00 0.00 0.00 4.46
7179 7858 2.033448 TGGCATCCCACAACGTCC 59.967 61.111 0.00 0.00 35.79 4.79
7212 7891 5.708736 TCAGGCAGAAATTATCCTAACCA 57.291 39.130 0.00 0.00 0.00 3.67
7253 7940 6.591448 CCAAATCTCTCGCACAATATATGCTA 59.409 38.462 9.52 0.00 41.10 3.49
7261 7948 3.057969 TGTCCAAATCTCTCGCACAAT 57.942 42.857 0.00 0.00 0.00 2.71
7268 7955 6.214191 TGTGTCTAGATGTCCAAATCTCTC 57.786 41.667 0.00 0.00 37.98 3.20
7286 7973 8.398665 GGTCTAGGATTTCAAACATAATGTGTC 58.601 37.037 0.00 0.00 41.14 3.67
7288 7975 7.409697 CGGTCTAGGATTTCAAACATAATGTG 58.590 38.462 0.00 0.00 0.00 3.21
7292 7979 6.057321 ACCGGTCTAGGATTTCAAACATAA 57.943 37.500 0.00 0.00 34.73 1.90
7294 7981 4.569719 ACCGGTCTAGGATTTCAAACAT 57.430 40.909 0.00 0.00 34.73 2.71
7295 7982 4.360951 AACCGGTCTAGGATTTCAAACA 57.639 40.909 8.04 0.00 34.73 2.83
7298 7985 4.355549 TCCTAACCGGTCTAGGATTTCAA 58.644 43.478 27.76 14.18 40.05 2.69
7299 7986 3.985127 TCCTAACCGGTCTAGGATTTCA 58.015 45.455 27.76 14.67 40.05 2.69
7305 7992 3.131709 TCGTATCCTAACCGGTCTAGG 57.868 52.381 25.24 25.24 37.82 3.02
7306 7993 7.307870 GCATATATCGTATCCTAACCGGTCTAG 60.308 44.444 8.04 11.90 0.00 2.43
7307 7994 6.484643 GCATATATCGTATCCTAACCGGTCTA 59.515 42.308 8.04 1.62 0.00 2.59
7308 7995 5.298777 GCATATATCGTATCCTAACCGGTCT 59.701 44.000 8.04 0.22 0.00 3.85
7309 7996 5.298777 AGCATATATCGTATCCTAACCGGTC 59.701 44.000 8.04 0.00 0.00 4.79
7310 7997 5.198965 AGCATATATCGTATCCTAACCGGT 58.801 41.667 0.00 0.00 0.00 5.28
7312 7999 8.016229 GTCATAGCATATATCGTATCCTAACCG 58.984 40.741 0.00 0.00 0.00 4.44
7337 8026 9.102757 GCTCATATCATCGGATGTTAATAATGT 57.897 33.333 17.01 0.00 34.89 2.71
7338 8027 9.101655 TGCTCATATCATCGGATGTTAATAATG 57.898 33.333 17.01 9.66 34.89 1.90
7350 8039 6.738832 AAATCAGATTGCTCATATCATCGG 57.261 37.500 0.00 0.00 0.00 4.18
7351 8040 8.504815 AGAAAAATCAGATTGCTCATATCATCG 58.495 33.333 0.00 0.00 0.00 3.84
7360 8049 4.260948 CCGGCTAGAAAAATCAGATTGCTC 60.261 45.833 0.00 0.00 0.00 4.26
7361 8050 3.629398 CCGGCTAGAAAAATCAGATTGCT 59.371 43.478 0.00 0.00 0.00 3.91
7362 8051 3.627577 TCCGGCTAGAAAAATCAGATTGC 59.372 43.478 0.00 0.00 0.00 3.56
7363 8052 5.818136 TTCCGGCTAGAAAAATCAGATTG 57.182 39.130 0.00 0.00 0.00 2.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.