Multiple sequence alignment - TraesCS4D01G056300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G056300 chr4D 100.000 4949 0 0 1 4949 31648864 31653812 0.000000e+00 9140.0
1 TraesCS4D01G056300 chr4A 90.451 1330 72 24 2553 3848 571587537 571588845 0.000000e+00 1701.0
2 TraesCS4D01G056300 chr4A 87.535 706 45 8 4005 4685 709196782 709197469 0.000000e+00 776.0
3 TraesCS4D01G056300 chr4A 82.878 841 76 36 1127 1915 571586241 571587065 0.000000e+00 693.0
4 TraesCS4D01G056300 chr4A 86.719 128 16 1 3083 3210 571587605 571587731 1.860000e-29 141.0
5 TraesCS4D01G056300 chr4A 80.193 207 11 12 854 1048 571586043 571586231 1.450000e-25 128.0
6 TraesCS4D01G056300 chr4A 94.667 75 4 0 2255 2329 571587439 571587513 3.130000e-22 117.0
7 TraesCS4D01G056300 chr4A 88.889 90 6 2 2171 2256 571587323 571587412 1.880000e-19 108.0
8 TraesCS4D01G056300 chr4A 86.667 75 10 0 1973 2047 571587250 571587324 3.170000e-12 84.2
9 TraesCS4D01G056300 chr4B 89.619 1156 82 23 2735 3856 44916893 44915742 0.000000e+00 1435.0
10 TraesCS4D01G056300 chr4B 85.434 1174 84 37 929 2047 44918636 44917495 0.000000e+00 1140.0
11 TraesCS4D01G056300 chr4B 93.924 576 22 4 2171 2742 44917496 44916930 0.000000e+00 857.0
12 TraesCS4D01G056300 chr4B 88.253 647 47 7 4005 4627 535748722 535749363 0.000000e+00 747.0
13 TraesCS4D01G056300 chr4B 82.135 946 74 27 4030 4949 663638472 663639348 0.000000e+00 723.0
14 TraesCS4D01G056300 chr4B 81.148 610 61 23 110 709 44923143 44922578 1.640000e-119 440.0
15 TraesCS4D01G056300 chr4B 77.596 183 31 7 4699 4875 565208285 565208463 8.760000e-18 102.0
16 TraesCS4D01G056300 chr3B 85.672 1012 63 25 3850 4807 19746122 19745139 0.000000e+00 990.0
17 TraesCS4D01G056300 chr3B 80.939 1086 107 35 3864 4907 434312508 434311481 0.000000e+00 767.0
18 TraesCS4D01G056300 chr3B 85.493 710 46 11 4005 4689 811474489 811473812 0.000000e+00 688.0
19 TraesCS4D01G056300 chr3B 84.073 383 39 19 4511 4883 227161532 227161902 2.830000e-92 350.0
20 TraesCS4D01G056300 chr6B 84.686 986 76 37 3864 4807 82459904 82458952 0.000000e+00 915.0
21 TraesCS4D01G056300 chr6B 84.349 837 55 18 3867 4667 230610812 230610016 0.000000e+00 750.0
22 TraesCS4D01G056300 chr6B 94.326 141 8 0 2041 2181 159990644 159990504 3.000000e-52 217.0
23 TraesCS4D01G056300 chr6B 93.793 145 7 2 2036 2179 172239621 172239764 3.000000e-52 217.0
24 TraesCS4D01G056300 chr7D 83.380 1065 96 36 3862 4896 381348743 381349756 0.000000e+00 911.0
25 TraesCS4D01G056300 chr7D 84.655 580 77 6 3130 3705 79531225 79531796 7.190000e-158 568.0
26 TraesCS4D01G056300 chr7B 84.913 981 57 29 3866 4788 144728803 144729750 0.000000e+00 907.0
27 TraesCS4D01G056300 chr7B 85.403 596 73 9 3119 3704 26740341 26740932 1.520000e-169 606.0
28 TraesCS4D01G056300 chr7B 97.744 133 3 0 2042 2174 332242758 332242890 3.850000e-56 230.0
29 TraesCS4D01G056300 chr2B 86.998 846 60 14 4005 4807 543503818 543502980 0.000000e+00 907.0
30 TraesCS4D01G056300 chr2B 84.372 979 64 27 3863 4788 5976707 5975765 0.000000e+00 878.0
31 TraesCS4D01G056300 chr2B 88.252 698 51 10 3864 4550 37436164 37435487 0.000000e+00 806.0
32 TraesCS4D01G056300 chr2B 87.268 699 55 13 3863 4550 44757308 44756633 0.000000e+00 767.0
33 TraesCS4D01G056300 chr2B 93.197 147 7 3 2029 2173 545760370 545760515 3.880000e-51 213.0
34 TraesCS4D01G056300 chr5B 81.485 1145 84 32 3861 4949 692446810 692447882 0.000000e+00 822.0
35 TraesCS4D01G056300 chr5B 81.239 1130 100 43 3861 4949 33620462 33621520 0.000000e+00 809.0
36 TraesCS4D01G056300 chr5B 97.561 41 1 0 3861 3901 241157333 241157373 2.470000e-08 71.3
37 TraesCS4D01G056300 chr5A 89.375 640 39 8 4012 4627 141566866 141567500 0.000000e+00 778.0
38 TraesCS4D01G056300 chr5A 94.964 139 6 1 2046 2184 46616188 46616325 3.000000e-52 217.0
39 TraesCS4D01G056300 chr1B 84.495 832 55 17 3871 4667 471528803 471528011 0.000000e+00 754.0
40 TraesCS4D01G056300 chr1B 85.348 546 35 21 4297 4807 42321967 42321432 1.580000e-144 523.0
41 TraesCS4D01G056300 chr1B 94.964 139 5 2 2038 2175 626226872 626227009 3.000000e-52 217.0
42 TraesCS4D01G056300 chr1B 93.151 146 8 2 2043 2187 601258840 601258984 3.880000e-51 213.0
43 TraesCS4D01G056300 chr2D 84.035 808 73 23 4006 4788 597820771 597821547 0.000000e+00 726.0
44 TraesCS4D01G056300 chr7A 85.249 583 77 6 3127 3705 82181431 82182008 4.270000e-165 592.0
45 TraesCS4D01G056300 chrUn 88.535 471 25 7 4223 4667 86367397 86367864 1.210000e-150 544.0
46 TraesCS4D01G056300 chrUn 74.556 169 24 16 273 426 63242537 63242701 6.920000e-04 56.5
47 TraesCS4D01G056300 chr1A 98.438 128 2 0 2046 2173 3261718 3261591 4.980000e-55 226.0
48 TraesCS4D01G056300 chr6A 81.818 253 37 9 4701 4949 461435298 461435545 2.340000e-48 204.0
49 TraesCS4D01G056300 chr6A 80.709 254 38 10 4701 4949 542378265 542378018 2.350000e-43 187.0
50 TraesCS4D01G056300 chr5D 89.375 160 17 0 2040 2199 179436771 179436930 8.400000e-48 202.0
51 TraesCS4D01G056300 chr3A 79.842 253 41 10 4701 4949 491525535 491525289 5.090000e-40 176.0
52 TraesCS4D01G056300 chr1D 85.612 139 10 1 3861 3989 482316024 482315886 2.400000e-28 137.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G056300 chr4D 31648864 31653812 4948 False 9140.0 9140 100.000000 1 4949 1 chr4D.!!$F1 4948
1 TraesCS4D01G056300 chr4A 709196782 709197469 687 False 776.0 776 87.535000 4005 4685 1 chr4A.!!$F1 680
2 TraesCS4D01G056300 chr4A 571586043 571588845 2802 False 424.6 1701 87.209143 854 3848 7 chr4A.!!$F2 2994
3 TraesCS4D01G056300 chr4B 44915742 44923143 7401 True 968.0 1435 87.531250 110 3856 4 chr4B.!!$R1 3746
4 TraesCS4D01G056300 chr4B 535748722 535749363 641 False 747.0 747 88.253000 4005 4627 1 chr4B.!!$F1 622
5 TraesCS4D01G056300 chr4B 663638472 663639348 876 False 723.0 723 82.135000 4030 4949 1 chr4B.!!$F3 919
6 TraesCS4D01G056300 chr3B 19745139 19746122 983 True 990.0 990 85.672000 3850 4807 1 chr3B.!!$R1 957
7 TraesCS4D01G056300 chr3B 434311481 434312508 1027 True 767.0 767 80.939000 3864 4907 1 chr3B.!!$R2 1043
8 TraesCS4D01G056300 chr3B 811473812 811474489 677 True 688.0 688 85.493000 4005 4689 1 chr3B.!!$R3 684
9 TraesCS4D01G056300 chr6B 82458952 82459904 952 True 915.0 915 84.686000 3864 4807 1 chr6B.!!$R1 943
10 TraesCS4D01G056300 chr6B 230610016 230610812 796 True 750.0 750 84.349000 3867 4667 1 chr6B.!!$R3 800
11 TraesCS4D01G056300 chr7D 381348743 381349756 1013 False 911.0 911 83.380000 3862 4896 1 chr7D.!!$F2 1034
12 TraesCS4D01G056300 chr7D 79531225 79531796 571 False 568.0 568 84.655000 3130 3705 1 chr7D.!!$F1 575
13 TraesCS4D01G056300 chr7B 144728803 144729750 947 False 907.0 907 84.913000 3866 4788 1 chr7B.!!$F2 922
14 TraesCS4D01G056300 chr7B 26740341 26740932 591 False 606.0 606 85.403000 3119 3704 1 chr7B.!!$F1 585
15 TraesCS4D01G056300 chr2B 543502980 543503818 838 True 907.0 907 86.998000 4005 4807 1 chr2B.!!$R4 802
16 TraesCS4D01G056300 chr2B 5975765 5976707 942 True 878.0 878 84.372000 3863 4788 1 chr2B.!!$R1 925
17 TraesCS4D01G056300 chr2B 37435487 37436164 677 True 806.0 806 88.252000 3864 4550 1 chr2B.!!$R2 686
18 TraesCS4D01G056300 chr2B 44756633 44757308 675 True 767.0 767 87.268000 3863 4550 1 chr2B.!!$R3 687
19 TraesCS4D01G056300 chr5B 692446810 692447882 1072 False 822.0 822 81.485000 3861 4949 1 chr5B.!!$F3 1088
20 TraesCS4D01G056300 chr5B 33620462 33621520 1058 False 809.0 809 81.239000 3861 4949 1 chr5B.!!$F1 1088
21 TraesCS4D01G056300 chr5A 141566866 141567500 634 False 778.0 778 89.375000 4012 4627 1 chr5A.!!$F2 615
22 TraesCS4D01G056300 chr1B 471528011 471528803 792 True 754.0 754 84.495000 3871 4667 1 chr1B.!!$R2 796
23 TraesCS4D01G056300 chr1B 42321432 42321967 535 True 523.0 523 85.348000 4297 4807 1 chr1B.!!$R1 510
24 TraesCS4D01G056300 chr2D 597820771 597821547 776 False 726.0 726 84.035000 4006 4788 1 chr2D.!!$F1 782
25 TraesCS4D01G056300 chr7A 82181431 82182008 577 False 592.0 592 85.249000 3127 3705 1 chr7A.!!$F1 578

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
807 1805 0.106015 GCAAGGGATTGCCATAGGGT 60.106 55.000 1.51 0.0 41.85 4.34 F
2061 6007 0.038744 ACTTACTCCCTTCGTCCGGA 59.961 55.000 0.00 0.0 0.00 5.14 F
2062 6008 1.180029 CTTACTCCCTTCGTCCGGAA 58.820 55.000 5.23 0.0 0.00 4.30 F
3284 7317 1.402968 TCCGGTAATACGCAGACAGAC 59.597 52.381 0.00 0.0 0.00 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2333 6311 0.031994 GCCACAACAAAACAGGCGAT 59.968 50.000 0.00 0.00 35.42 4.58 R
3202 7234 0.321298 TAGGCACACCCGAAAGAAGC 60.321 55.000 0.00 0.00 39.21 3.86 R
3297 7330 0.746204 GCAGGGTTCTTAGGAGCAGC 60.746 60.000 0.00 0.00 0.00 5.25 R
4095 8206 3.621805 TTTGGTGGGCTCTCGCGA 61.622 61.111 9.26 9.26 36.88 5.87 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.987594 GAGAGAATTGGGGCCAACT 57.012 52.632 4.39 0.00 38.88 3.16
19 20 2.222227 GAGAGAATTGGGGCCAACTT 57.778 50.000 4.39 0.00 38.88 2.66
20 21 2.095461 GAGAGAATTGGGGCCAACTTC 58.905 52.381 4.39 3.99 38.88 3.01
21 22 1.713078 AGAGAATTGGGGCCAACTTCT 59.287 47.619 13.01 13.01 38.88 2.85
22 23 2.110721 AGAGAATTGGGGCCAACTTCTT 59.889 45.455 14.19 3.16 38.88 2.52
23 24 3.333680 AGAGAATTGGGGCCAACTTCTTA 59.666 43.478 14.19 0.00 38.88 2.10
24 25 3.696548 GAGAATTGGGGCCAACTTCTTAG 59.303 47.826 14.19 0.00 38.88 2.18
25 26 2.532250 ATTGGGGCCAACTTCTTAGG 57.468 50.000 4.39 0.00 38.88 2.69
26 27 1.451449 TTGGGGCCAACTTCTTAGGA 58.549 50.000 4.39 0.00 0.00 2.94
27 28 1.451449 TGGGGCCAACTTCTTAGGAA 58.549 50.000 4.39 0.00 0.00 3.36
28 29 2.000048 TGGGGCCAACTTCTTAGGAAT 59.000 47.619 4.39 0.00 0.00 3.01
29 30 2.381961 TGGGGCCAACTTCTTAGGAATT 59.618 45.455 4.39 0.00 0.00 2.17
30 31 3.181412 TGGGGCCAACTTCTTAGGAATTT 60.181 43.478 4.39 0.00 0.00 1.82
31 32 4.044825 TGGGGCCAACTTCTTAGGAATTTA 59.955 41.667 4.39 0.00 0.00 1.40
32 33 5.020795 GGGGCCAACTTCTTAGGAATTTAA 58.979 41.667 4.39 0.00 0.00 1.52
33 34 5.127194 GGGGCCAACTTCTTAGGAATTTAAG 59.873 44.000 4.39 0.00 32.99 1.85
34 35 5.949952 GGGCCAACTTCTTAGGAATTTAAGA 59.050 40.000 4.39 0.00 37.76 2.10
35 36 6.607600 GGGCCAACTTCTTAGGAATTTAAGAT 59.392 38.462 4.39 0.00 38.92 2.40
36 37 7.778382 GGGCCAACTTCTTAGGAATTTAAGATA 59.222 37.037 4.39 0.00 38.92 1.98
37 38 9.355916 GGCCAACTTCTTAGGAATTTAAGATAT 57.644 33.333 0.00 0.00 38.92 1.63
41 42 8.926092 ACTTCTTAGGAATTTAAGATATGGGC 57.074 34.615 1.39 0.00 38.92 5.36
42 43 7.661847 ACTTCTTAGGAATTTAAGATATGGGCG 59.338 37.037 1.39 0.00 38.92 6.13
43 44 7.074653 TCTTAGGAATTTAAGATATGGGCGT 57.925 36.000 0.00 0.00 35.35 5.68
44 45 6.934645 TCTTAGGAATTTAAGATATGGGCGTG 59.065 38.462 0.00 0.00 35.35 5.34
45 46 4.398319 AGGAATTTAAGATATGGGCGTGG 58.602 43.478 0.00 0.00 0.00 4.94
46 47 4.141251 AGGAATTTAAGATATGGGCGTGGT 60.141 41.667 0.00 0.00 0.00 4.16
47 48 4.023193 GGAATTTAAGATATGGGCGTGGTG 60.023 45.833 0.00 0.00 0.00 4.17
48 49 3.637911 TTTAAGATATGGGCGTGGTGT 57.362 42.857 0.00 0.00 0.00 4.16
49 50 3.637911 TTAAGATATGGGCGTGGTGTT 57.362 42.857 0.00 0.00 0.00 3.32
50 51 2.038387 AAGATATGGGCGTGGTGTTC 57.962 50.000 0.00 0.00 0.00 3.18
51 52 0.180406 AGATATGGGCGTGGTGTTCC 59.820 55.000 0.00 0.00 0.00 3.62
52 53 1.153249 ATATGGGCGTGGTGTTCCG 60.153 57.895 0.00 0.00 36.30 4.30
53 54 2.602746 ATATGGGCGTGGTGTTCCGG 62.603 60.000 0.00 0.00 36.30 5.14
56 57 4.629523 GGCGTGGTGTTCCGGGAA 62.630 66.667 5.09 5.09 36.30 3.97
57 58 2.592287 GCGTGGTGTTCCGGGAAA 60.592 61.111 11.82 0.00 36.30 3.13
58 59 2.613506 GCGTGGTGTTCCGGGAAAG 61.614 63.158 11.82 0.69 36.30 2.62
59 60 1.070105 CGTGGTGTTCCGGGAAAGA 59.930 57.895 11.82 0.00 36.30 2.52
60 61 0.533308 CGTGGTGTTCCGGGAAAGAA 60.533 55.000 11.82 0.00 36.30 2.52
61 62 1.682740 GTGGTGTTCCGGGAAAGAAA 58.317 50.000 11.82 0.00 36.30 2.52
62 63 2.025898 GTGGTGTTCCGGGAAAGAAAA 58.974 47.619 11.82 0.00 36.30 2.29
63 64 2.427812 GTGGTGTTCCGGGAAAGAAAAA 59.572 45.455 11.82 0.00 36.30 1.94
86 87 8.768501 AAAATATTAAGGGAGAAGTGGGAATC 57.231 34.615 0.00 0.00 0.00 2.52
87 88 3.906720 TTAAGGGAGAAGTGGGAATCG 57.093 47.619 0.00 0.00 0.00 3.34
88 89 1.952621 AAGGGAGAAGTGGGAATCGA 58.047 50.000 0.00 0.00 0.00 3.59
89 90 1.952621 AGGGAGAAGTGGGAATCGAA 58.047 50.000 0.00 0.00 0.00 3.71
90 91 1.555533 AGGGAGAAGTGGGAATCGAAC 59.444 52.381 0.00 0.00 0.00 3.95
91 92 1.407025 GGGAGAAGTGGGAATCGAACC 60.407 57.143 0.00 0.00 0.00 3.62
92 93 1.555533 GGAGAAGTGGGAATCGAACCT 59.444 52.381 10.93 0.00 0.00 3.50
93 94 2.622436 GAGAAGTGGGAATCGAACCTG 58.378 52.381 10.93 0.00 0.00 4.00
94 95 1.087501 GAAGTGGGAATCGAACCTGC 58.912 55.000 10.93 5.52 0.00 4.85
95 96 0.400213 AAGTGGGAATCGAACCTGCA 59.600 50.000 10.93 0.00 0.00 4.41
96 97 0.321653 AGTGGGAATCGAACCTGCAC 60.322 55.000 10.93 10.87 0.00 4.57
97 98 1.002624 TGGGAATCGAACCTGCACC 60.003 57.895 10.93 0.00 0.00 5.01
98 99 2.106683 GGGAATCGAACCTGCACCG 61.107 63.158 10.93 0.00 0.00 4.94
99 100 2.750888 GGAATCGAACCTGCACCGC 61.751 63.158 0.00 0.00 0.00 5.68
100 101 2.031919 AATCGAACCTGCACCGCA 59.968 55.556 0.00 0.00 36.92 5.69
101 102 1.369091 GAATCGAACCTGCACCGCAT 61.369 55.000 0.00 0.00 38.13 4.73
102 103 1.647545 AATCGAACCTGCACCGCATG 61.648 55.000 0.00 0.00 38.13 4.06
103 104 3.803082 CGAACCTGCACCGCATGG 61.803 66.667 0.00 0.00 38.13 3.66
133 134 2.507484 TCAGCAGGAAAATGACCACTG 58.493 47.619 0.00 0.00 36.14 3.66
134 135 1.542915 CAGCAGGAAAATGACCACTGG 59.457 52.381 0.00 0.00 33.34 4.00
142 143 2.568623 AATGACCACTGGACCTGAAC 57.431 50.000 0.71 0.00 0.00 3.18
173 174 3.500680 TGTCTAGATTCCGCAAACAAACC 59.499 43.478 0.00 0.00 0.00 3.27
182 183 5.461032 TCCGCAAACAAACCTATTGAATT 57.539 34.783 0.00 0.00 0.00 2.17
295 299 1.308998 AGTTCACCAGCACGGAAAAG 58.691 50.000 0.00 0.00 38.63 2.27
314 318 9.900264 CGGAAAAGAGTTTAAAGTTTGAAAATG 57.100 29.630 0.00 0.00 0.00 2.32
488 498 6.681777 AGATGTTCTTGGGATTTCGAAAAAG 58.318 36.000 15.66 13.46 0.00 2.27
489 499 5.845391 TGTTCTTGGGATTTCGAAAAAGT 57.155 34.783 15.66 0.00 0.00 2.66
491 501 6.270064 TGTTCTTGGGATTTCGAAAAAGTTC 58.730 36.000 15.66 7.66 0.00 3.01
494 504 6.677913 TCTTGGGATTTCGAAAAAGTTCATC 58.322 36.000 15.66 5.79 32.89 2.92
513 523 9.219603 AGTTCATCATCTTTAGAAAAATCGTCA 57.780 29.630 0.00 0.00 0.00 4.35
514 524 9.825972 GTTCATCATCTTTAGAAAAATCGTCAA 57.174 29.630 0.00 0.00 0.00 3.18
530 540 6.747659 ATCGTCAATTTTGGAAAAAGTTCG 57.252 33.333 0.00 0.00 34.28 3.95
532 542 5.513495 TCGTCAATTTTGGAAAAAGTTCGTG 59.487 36.000 0.00 0.00 34.28 4.35
533 543 5.513495 CGTCAATTTTGGAAAAAGTTCGTGA 59.487 36.000 0.00 0.00 34.28 4.35
553 563 9.566530 TTCGTGAAAAATGGAATATGTACATTG 57.433 29.630 14.77 0.00 35.22 2.82
554 564 8.951243 TCGTGAAAAATGGAATATGTACATTGA 58.049 29.630 14.77 0.00 35.22 2.57
555 565 9.734620 CGTGAAAAATGGAATATGTACATTGAT 57.265 29.630 14.77 0.00 35.22 2.57
584 594 9.558396 TCTTTATCAAATTTGGAAAAAGTGCAT 57.442 25.926 24.21 11.19 0.00 3.96
592 602 5.831702 TTGGAAAAAGTGCATGCATTTTT 57.168 30.435 34.90 34.90 44.05 1.94
595 605 5.356190 TGGAAAAAGTGCATGCATTTTTGAA 59.644 32.000 38.33 27.93 42.31 2.69
596 606 6.039493 TGGAAAAAGTGCATGCATTTTTGAAT 59.961 30.769 38.33 28.59 42.31 2.57
597 607 6.579666 GGAAAAAGTGCATGCATTTTTGAATC 59.420 34.615 38.33 32.22 42.31 2.52
598 608 6.870971 AAAAGTGCATGCATTTTTGAATCT 57.129 29.167 37.68 21.99 41.83 2.40
599 609 6.870971 AAAGTGCATGCATTTTTGAATCTT 57.129 29.167 29.20 18.77 33.12 2.40
600 610 7.966246 AAAGTGCATGCATTTTTGAATCTTA 57.034 28.000 29.20 0.00 33.12 2.10
601 611 7.966246 AAGTGCATGCATTTTTGAATCTTAA 57.034 28.000 25.64 0.00 0.00 1.85
602 612 7.966246 AGTGCATGCATTTTTGAATCTTAAA 57.034 28.000 25.64 0.00 0.00 1.52
603 613 8.380743 AGTGCATGCATTTTTGAATCTTAAAA 57.619 26.923 25.64 0.00 0.00 1.52
604 614 8.838365 AGTGCATGCATTTTTGAATCTTAAAAA 58.162 25.926 25.64 0.00 40.17 1.94
605 615 9.615295 GTGCATGCATTTTTGAATCTTAAAAAT 57.385 25.926 25.64 0.00 44.27 1.82
661 671 1.529226 TCAACCAATGAACGGCGAAT 58.471 45.000 16.62 0.54 34.30 3.34
706 1650 4.506886 AAGAGGAAAGTAGTCACACTCG 57.493 45.455 0.00 0.00 0.00 4.18
717 1661 2.492484 AGTCACACTCGTTGAGGTATCC 59.508 50.000 0.00 0.00 33.35 2.59
718 1662 2.492484 GTCACACTCGTTGAGGTATCCT 59.508 50.000 0.00 0.00 36.03 3.24
719 1663 3.693085 GTCACACTCGTTGAGGTATCCTA 59.307 47.826 0.00 0.00 31.76 2.94
720 1664 3.693085 TCACACTCGTTGAGGTATCCTAC 59.307 47.826 0.00 0.00 31.76 3.18
744 1688 3.380142 GTGGTTACACCGTTTCGAACTA 58.620 45.455 0.00 0.00 42.58 2.24
788 1732 1.586564 GAGAACGATGGACCGAGCG 60.587 63.158 0.00 0.94 0.00 5.03
789 1733 3.255379 GAACGATGGACCGAGCGC 61.255 66.667 0.00 0.00 0.00 5.92
791 1735 3.583276 AACGATGGACCGAGCGCAA 62.583 57.895 11.47 0.00 0.00 4.85
792 1736 3.257561 CGATGGACCGAGCGCAAG 61.258 66.667 11.47 1.89 43.44 4.01
802 1800 2.043652 AGCGCAAGGGATTGCCAT 60.044 55.556 11.47 0.00 44.66 4.40
807 1805 0.106015 GCAAGGGATTGCCATAGGGT 60.106 55.000 1.51 0.00 41.85 4.34
808 1806 1.696063 CAAGGGATTGCCATAGGGTG 58.304 55.000 0.00 0.00 36.17 4.61
809 1807 0.106015 AAGGGATTGCCATAGGGTGC 60.106 55.000 0.00 0.00 36.17 5.01
810 1808 1.531602 GGGATTGCCATAGGGTGCC 60.532 63.158 0.00 0.00 36.17 5.01
811 1809 1.898574 GGATTGCCATAGGGTGCCG 60.899 63.158 0.00 0.00 36.17 5.69
812 1810 2.519302 ATTGCCATAGGGTGCCGC 60.519 61.111 0.00 0.00 36.17 6.53
813 1811 3.357444 ATTGCCATAGGGTGCCGCA 62.357 57.895 0.00 0.00 36.17 5.69
814 1812 2.852563 ATTGCCATAGGGTGCCGCAA 62.853 55.000 0.00 0.00 38.67 4.85
815 1813 2.753849 GCCATAGGGTGCCGCAAA 60.754 61.111 0.00 0.00 36.17 3.68
816 1814 2.347322 GCCATAGGGTGCCGCAAAA 61.347 57.895 0.00 0.00 36.17 2.44
817 1815 1.809207 CCATAGGGTGCCGCAAAAG 59.191 57.895 0.00 0.00 0.00 2.27
836 1834 2.267961 GGGCTCCCGTGTTCGATT 59.732 61.111 0.00 0.00 39.71 3.34
838 1836 1.814169 GGCTCCCGTGTTCGATTCC 60.814 63.158 0.00 0.00 39.71 3.01
839 1837 1.218316 GCTCCCGTGTTCGATTCCT 59.782 57.895 0.00 0.00 39.71 3.36
840 1838 0.806492 GCTCCCGTGTTCGATTCCTC 60.806 60.000 0.00 0.00 39.71 3.71
841 1839 0.179108 CTCCCGTGTTCGATTCCTCC 60.179 60.000 0.00 0.00 39.71 4.30
842 1840 0.613853 TCCCGTGTTCGATTCCTCCT 60.614 55.000 0.00 0.00 39.71 3.69
843 1841 0.179108 CCCGTGTTCGATTCCTCCTC 60.179 60.000 0.00 0.00 39.71 3.71
847 2909 0.323999 TGTTCGATTCCTCCTCCCGA 60.324 55.000 0.00 0.00 0.00 5.14
887 3154 8.713036 AGGAATTTTCACTGCTTATATCTCTCT 58.287 33.333 0.00 0.00 0.00 3.10
921 3188 4.301027 GTCGAGGGGCGGCATAGG 62.301 72.222 12.47 0.00 45.76 2.57
1073 4824 0.474614 GGCCAGGGAGGATAGGTTTC 59.525 60.000 0.00 0.00 41.22 2.78
1118 4869 0.329596 AGCCGAAAGCCAAATCTCCT 59.670 50.000 0.00 0.00 45.47 3.69
1119 4870 0.453390 GCCGAAAGCCAAATCTCCTG 59.547 55.000 0.00 0.00 34.35 3.86
1120 4871 0.453390 CCGAAAGCCAAATCTCCTGC 59.547 55.000 0.00 0.00 0.00 4.85
1122 4873 1.541147 CGAAAGCCAAATCTCCTGCAA 59.459 47.619 0.00 0.00 0.00 4.08
1123 4874 2.669391 CGAAAGCCAAATCTCCTGCAAC 60.669 50.000 0.00 0.00 0.00 4.17
1125 4876 2.299326 AGCCAAATCTCCTGCAACTT 57.701 45.000 0.00 0.00 0.00 2.66
1127 4878 2.165998 GCCAAATCTCCTGCAACTTCT 58.834 47.619 0.00 0.00 0.00 2.85
1211 4967 1.695242 TCGGAGCTCAACCAAGGTAAA 59.305 47.619 17.19 0.00 0.00 2.01
1266 5022 2.573869 CGCTGTCAGACGGGATGT 59.426 61.111 11.56 0.00 0.00 3.06
1292 5048 6.882656 AGTCAGTAGTCTGTCTATACGGTAA 58.117 40.000 0.00 0.00 41.91 2.85
1293 5049 7.507829 AGTCAGTAGTCTGTCTATACGGTAAT 58.492 38.462 0.00 0.00 41.91 1.89
1294 5050 8.646004 AGTCAGTAGTCTGTCTATACGGTAATA 58.354 37.037 0.00 0.00 41.91 0.98
1335 5098 2.679934 CGCAATCGCAGTGGCAGAA 61.680 57.895 0.00 0.00 41.24 3.02
1413 5181 3.192796 GAGCGGAGTTCTCTCGCT 58.807 61.111 25.50 25.50 45.40 4.93
1416 5184 2.202676 CGGAGTTCTCTCGCTGGC 60.203 66.667 0.00 0.00 41.26 4.85
1417 5185 2.202676 GGAGTTCTCTCGCTGGCG 60.203 66.667 8.80 8.80 41.26 5.69
1497 5265 0.038983 TGCTGCTTCGTGCGTTACTA 60.039 50.000 0.00 0.00 46.63 1.82
1509 5277 8.644264 TTCGTGCGTTACTAAACATTTTATTC 57.356 30.769 0.00 0.00 35.16 1.75
1529 5300 4.985538 TCGAGATTCCTCTACTTTGGTC 57.014 45.455 0.00 0.00 37.28 4.02
1535 5316 1.079503 CCTCTACTTTGGTCTTGCGC 58.920 55.000 0.00 0.00 0.00 6.09
1539 5320 2.757980 TACTTTGGTCTTGCGCCCCC 62.758 60.000 4.18 0.00 0.00 5.40
1562 5344 4.201744 CGTTGTATTGACCCGAATTGTACC 60.202 45.833 0.00 0.00 0.00 3.34
1571 5353 2.422127 CCCGAATTGTACCAGCGAAATT 59.578 45.455 0.00 0.00 0.00 1.82
1591 5373 9.574458 CGAAATTTCTGAATCTGTAGAGTTCTA 57.426 33.333 15.92 0.00 0.00 2.10
1614 5396 2.033801 GCGTGCATTCTAATTCAGCCAT 59.966 45.455 0.00 0.00 0.00 4.40
1642 5443 6.978080 GCCGTATTTTCATGTAATTGGTGATT 59.022 34.615 0.00 0.00 0.00 2.57
1652 5453 9.388506 TCATGTAATTGGTGATTTGTTGTTTTT 57.611 25.926 0.00 0.00 0.00 1.94
1689 5490 3.181467 TGAATTTTGTTGTCCAGCCTTGG 60.181 43.478 0.00 0.00 46.49 3.61
1698 5502 3.458163 CAGCCTTGGCCATGCTGG 61.458 66.667 34.19 23.03 46.71 4.85
1699 5503 3.988678 AGCCTTGGCCATGCTGGT 61.989 61.111 24.94 10.82 40.46 4.00
1700 5504 2.999063 GCCTTGGCCATGCTGGTT 60.999 61.111 18.02 0.00 40.46 3.67
1701 5505 2.586293 GCCTTGGCCATGCTGGTTT 61.586 57.895 18.02 0.00 40.46 3.27
1802 5609 5.124297 TCTGGAATCAATACACAGTGCATTG 59.876 40.000 17.52 17.52 33.51 2.82
1844 5651 4.087892 GCTCGGCTCCCTGCTTGA 62.088 66.667 0.00 0.00 42.39 3.02
1846 5653 2.032860 GCTCGGCTCCCTGCTTGATA 62.033 60.000 0.00 0.00 42.39 2.15
1890 5697 7.336176 GGCTAAAGCATTGTAGTACTTAACCTT 59.664 37.037 0.00 1.86 44.36 3.50
1898 5705 8.926710 CATTGTAGTACTTAACCTTCTGTTCAG 58.073 37.037 0.00 0.00 38.42 3.02
1915 5722 1.494721 TCAGCTGGAACTGGAAAACCT 59.505 47.619 15.13 0.00 38.26 3.50
1916 5723 1.610522 CAGCTGGAACTGGAAAACCTG 59.389 52.381 5.57 0.00 33.85 4.00
1917 5724 0.961753 GCTGGAACTGGAAAACCTGG 59.038 55.000 0.00 0.00 0.00 4.45
1918 5725 1.754201 GCTGGAACTGGAAAACCTGGT 60.754 52.381 0.00 0.00 0.00 4.00
1920 5727 3.827722 CTGGAACTGGAAAACCTGGTTA 58.172 45.455 13.37 0.00 0.00 2.85
1921 5728 3.558033 TGGAACTGGAAAACCTGGTTAC 58.442 45.455 13.37 10.00 0.00 2.50
1922 5729 3.203487 TGGAACTGGAAAACCTGGTTACT 59.797 43.478 13.37 2.96 0.00 2.24
1923 5730 4.212716 GGAACTGGAAAACCTGGTTACTT 58.787 43.478 13.37 4.20 0.00 2.24
1924 5731 4.647853 GGAACTGGAAAACCTGGTTACTTT 59.352 41.667 13.37 3.39 0.00 2.66
1925 5732 5.829391 GGAACTGGAAAACCTGGTTACTTTA 59.171 40.000 13.37 0.00 0.00 1.85
1926 5733 6.238842 GGAACTGGAAAACCTGGTTACTTTAC 60.239 42.308 13.37 5.13 0.00 2.01
1927 5734 5.757988 ACTGGAAAACCTGGTTACTTTACA 58.242 37.500 13.37 9.65 0.00 2.41
1928 5735 6.189133 ACTGGAAAACCTGGTTACTTTACAA 58.811 36.000 13.37 0.00 0.00 2.41
1929 5736 6.837048 ACTGGAAAACCTGGTTACTTTACAAT 59.163 34.615 13.37 0.00 0.00 2.71
1930 5737 7.343574 ACTGGAAAACCTGGTTACTTTACAATT 59.656 33.333 13.37 0.00 0.00 2.32
1931 5738 8.763984 TGGAAAACCTGGTTACTTTACAATTA 57.236 30.769 13.37 0.00 0.00 1.40
1969 5898 7.031372 CCATTGTAACATGATGTTTCTCCAAG 58.969 38.462 16.75 8.35 41.45 3.61
1994 5940 7.770433 AGTGTACTTGCTATTTGATGCATCTTA 59.230 33.333 26.32 14.86 39.07 2.10
2017 5963 9.643693 CTTAAGATGCCAACAATTTTTCTGTAT 57.356 29.630 0.00 0.00 0.00 2.29
2023 5969 7.946207 TGCCAACAATTTTTCTGTATAGAACA 58.054 30.769 0.77 0.00 42.41 3.18
2037 5983 2.698855 AGAACAGGATATTGCGCTGT 57.301 45.000 9.73 0.00 0.00 4.40
2039 5985 3.325230 GAACAGGATATTGCGCTGTTC 57.675 47.619 17.13 17.13 44.21 3.18
2045 5991 4.572389 CAGGATATTGCGCTGTTCTTACTT 59.428 41.667 9.73 0.00 0.00 2.24
2046 5992 5.753438 CAGGATATTGCGCTGTTCTTACTTA 59.247 40.000 9.73 0.00 0.00 2.24
2047 5993 5.753921 AGGATATTGCGCTGTTCTTACTTAC 59.246 40.000 9.73 0.00 0.00 2.34
2048 5994 5.753921 GGATATTGCGCTGTTCTTACTTACT 59.246 40.000 9.73 0.00 0.00 2.24
2049 5995 6.074249 GGATATTGCGCTGTTCTTACTTACTC 60.074 42.308 9.73 0.00 0.00 2.59
2050 5996 2.955614 TGCGCTGTTCTTACTTACTCC 58.044 47.619 9.73 0.00 0.00 3.85
2051 5997 2.269172 GCGCTGTTCTTACTTACTCCC 58.731 52.381 0.00 0.00 0.00 4.30
2052 5998 2.094130 GCGCTGTTCTTACTTACTCCCT 60.094 50.000 0.00 0.00 0.00 4.20
2053 5999 3.616802 GCGCTGTTCTTACTTACTCCCTT 60.617 47.826 0.00 0.00 0.00 3.95
2054 6000 4.174762 CGCTGTTCTTACTTACTCCCTTC 58.825 47.826 0.00 0.00 0.00 3.46
2055 6001 4.174762 GCTGTTCTTACTTACTCCCTTCG 58.825 47.826 0.00 0.00 0.00 3.79
2056 6002 4.321824 GCTGTTCTTACTTACTCCCTTCGT 60.322 45.833 0.00 0.00 0.00 3.85
2057 6003 5.382618 TGTTCTTACTTACTCCCTTCGTC 57.617 43.478 0.00 0.00 0.00 4.20
2058 6004 4.219288 TGTTCTTACTTACTCCCTTCGTCC 59.781 45.833 0.00 0.00 0.00 4.79
2059 6005 3.012518 TCTTACTTACTCCCTTCGTCCG 58.987 50.000 0.00 0.00 0.00 4.79
2060 6006 1.755179 TACTTACTCCCTTCGTCCGG 58.245 55.000 0.00 0.00 0.00 5.14
2061 6007 0.038744 ACTTACTCCCTTCGTCCGGA 59.961 55.000 0.00 0.00 0.00 5.14
2062 6008 1.180029 CTTACTCCCTTCGTCCGGAA 58.820 55.000 5.23 0.00 0.00 4.30
2063 6009 1.547372 CTTACTCCCTTCGTCCGGAAA 59.453 52.381 5.23 0.00 33.34 3.13
2064 6010 1.856629 TACTCCCTTCGTCCGGAAAT 58.143 50.000 5.23 0.00 33.34 2.17
2065 6011 1.856629 ACTCCCTTCGTCCGGAAATA 58.143 50.000 5.23 0.00 33.34 1.40
2066 6012 1.479730 ACTCCCTTCGTCCGGAAATAC 59.520 52.381 5.23 0.00 33.34 1.89
2067 6013 1.755380 CTCCCTTCGTCCGGAAATACT 59.245 52.381 5.23 0.00 33.34 2.12
2068 6014 2.167900 CTCCCTTCGTCCGGAAATACTT 59.832 50.000 5.23 0.00 33.34 2.24
2069 6015 2.093869 TCCCTTCGTCCGGAAATACTTG 60.094 50.000 5.23 0.00 33.34 3.16
2070 6016 2.354403 CCCTTCGTCCGGAAATACTTGT 60.354 50.000 5.23 0.00 33.34 3.16
2071 6017 2.928116 CCTTCGTCCGGAAATACTTGTC 59.072 50.000 5.23 0.00 33.34 3.18
2072 6018 3.581755 CTTCGTCCGGAAATACTTGTCA 58.418 45.455 5.23 0.00 33.34 3.58
2073 6019 3.880047 TCGTCCGGAAATACTTGTCAT 57.120 42.857 5.23 0.00 0.00 3.06
2074 6020 3.777478 TCGTCCGGAAATACTTGTCATC 58.223 45.455 5.23 0.00 0.00 2.92
2075 6021 3.193903 TCGTCCGGAAATACTTGTCATCA 59.806 43.478 5.23 0.00 0.00 3.07
2076 6022 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
2077 6023 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
2078 6024 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
2079 6025 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
2080 6026 6.747280 GTCCGGAAATACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
2081 6027 6.657117 TCCGGAAATACTTGTCATCAAAATGA 59.343 34.615 0.00 0.00 39.63 2.57
2082 6028 7.175816 TCCGGAAATACTTGTCATCAAAATGAA 59.824 33.333 0.00 0.00 43.42 2.57
2083 6029 7.975616 CCGGAAATACTTGTCATCAAAATGAAT 59.024 33.333 0.00 0.00 43.42 2.57
2091 6037 9.918630 ACTTGTCATCAAAATGAATAAAAGGAG 57.081 29.630 0.00 0.00 43.42 3.69
2105 6051 9.132923 TGAATAAAAGGAGATGTATCTAGACGT 57.867 33.333 0.00 0.00 37.25 4.34
2113 6059 9.796180 AGGAGATGTATCTAGACGTATTTTAGT 57.204 33.333 0.00 0.00 37.25 2.24
2127 6073 9.242477 GACGTATTTTAGTTCTAGATACAACCC 57.758 37.037 0.00 0.00 0.00 4.11
2128 6074 8.975295 ACGTATTTTAGTTCTAGATACAACCCT 58.025 33.333 0.00 0.00 0.00 4.34
2129 6075 9.813446 CGTATTTTAGTTCTAGATACAACCCTT 57.187 33.333 0.00 0.00 0.00 3.95
2137 6083 8.832735 AGTTCTAGATACAACCCTTTTTATCCA 58.167 33.333 0.00 0.00 0.00 3.41
2138 6084 9.628500 GTTCTAGATACAACCCTTTTTATCCAT 57.372 33.333 0.00 0.00 0.00 3.41
2143 6089 9.320295 AGATACAACCCTTTTTATCCATTTTGA 57.680 29.630 0.00 0.00 0.00 2.69
2145 6091 9.889128 ATACAACCCTTTTTATCCATTTTGATG 57.111 29.630 0.00 0.00 0.00 3.07
2146 6092 7.972301 ACAACCCTTTTTATCCATTTTGATGA 58.028 30.769 0.00 0.00 0.00 2.92
2147 6093 7.877612 ACAACCCTTTTTATCCATTTTGATGAC 59.122 33.333 0.00 0.00 0.00 3.06
2148 6094 7.552050 ACCCTTTTTATCCATTTTGATGACA 57.448 32.000 0.00 0.00 0.00 3.58
2149 6095 7.972301 ACCCTTTTTATCCATTTTGATGACAA 58.028 30.769 0.00 0.00 0.00 3.18
2150 6096 8.096414 ACCCTTTTTATCCATTTTGATGACAAG 58.904 33.333 0.00 0.00 37.32 3.16
2151 6097 8.096414 CCCTTTTTATCCATTTTGATGACAAGT 58.904 33.333 0.00 0.00 37.32 3.16
2158 6104 8.915871 ATCCATTTTGATGACAAGTATTTTCG 57.084 30.769 0.00 0.00 37.32 3.46
2159 6105 7.312154 TCCATTTTGATGACAAGTATTTTCGG 58.688 34.615 0.00 0.00 37.32 4.30
2160 6106 7.175816 TCCATTTTGATGACAAGTATTTTCGGA 59.824 33.333 0.00 0.00 37.32 4.55
2161 6107 7.273381 CCATTTTGATGACAAGTATTTTCGGAC 59.727 37.037 0.00 0.00 37.32 4.79
2162 6108 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
2163 6109 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
2164 6110 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
2165 6111 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
2166 6112 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
2167 6113 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
2168 6114 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
2169 6115 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
2180 6126 4.614535 CGGACGGAGGGAGTATATTTTACG 60.615 50.000 0.00 0.00 0.00 3.18
2333 6311 9.670442 AATCCCACCTCAAGTAGATTACTATTA 57.330 33.333 0.00 0.00 38.26 0.98
2336 6314 8.244802 CCCACCTCAAGTAGATTACTATTATCG 58.755 40.741 0.00 0.00 38.26 2.92
2345 6323 9.477484 AGTAGATTACTATTATCGCCTGTTTTG 57.523 33.333 0.00 0.00 37.23 2.44
2350 6328 5.938322 ACTATTATCGCCTGTTTTGTTGTG 58.062 37.500 0.00 0.00 0.00 3.33
2361 6339 3.128589 TGTTTTGTTGTGGCACTCTCTTC 59.871 43.478 19.83 4.93 0.00 2.87
2445 6424 5.571784 ATGAAACCAAGTCATACATGCAG 57.428 39.130 0.00 0.00 33.91 4.41
2448 6427 3.912496 ACCAAGTCATACATGCAGCTA 57.088 42.857 0.00 0.00 0.00 3.32
2525 6504 4.250464 TGAAAGCACCAACCGTAGAATAG 58.750 43.478 0.00 0.00 0.00 1.73
2592 6571 6.463614 CCTTTCCATAGTCAGAGTATTCCCTG 60.464 46.154 0.00 0.00 0.00 4.45
2733 6712 2.039480 TGCAGAAGTGAGCCTTGAGATT 59.961 45.455 0.00 0.00 32.03 2.40
2830 6852 8.689251 TTCTTCAAGTAGATTAGTGATCGTTG 57.311 34.615 0.00 0.00 39.85 4.10
2831 6853 6.752351 TCTTCAAGTAGATTAGTGATCGTTGC 59.248 38.462 0.00 0.00 39.85 4.17
2832 6854 6.208988 TCAAGTAGATTAGTGATCGTTGCT 57.791 37.500 0.00 0.00 39.85 3.91
2833 6855 6.036470 TCAAGTAGATTAGTGATCGTTGCTG 58.964 40.000 0.00 0.00 39.85 4.41
2883 6907 8.716674 AATTCCAGATGGCATATGTTCTTTAT 57.283 30.769 19.71 2.62 34.44 1.40
3017 7044 4.873827 GTCAAACTTTTCCCCTTTGGTTTC 59.126 41.667 0.00 0.00 34.77 2.78
3033 7060 7.175641 CCTTTGGTTTCTCTCAGTATTGACATT 59.824 37.037 0.00 0.00 0.00 2.71
3036 7063 6.650807 TGGTTTCTCTCAGTATTGACATTGAC 59.349 38.462 0.00 0.00 0.00 3.18
3050 7077 4.002982 GACATTGACTCCAGCAATACACA 58.997 43.478 0.00 0.00 34.41 3.72
3117 7149 9.900710 GATGACATACGTTCTTTACTCTATGAT 57.099 33.333 0.00 0.00 0.00 2.45
3202 7234 8.660373 GCTTTGAGATTAATATTACCCTGATCG 58.340 37.037 0.00 0.00 0.00 3.69
3210 7242 8.603242 TTAATATTACCCTGATCGCTTCTTTC 57.397 34.615 0.00 0.00 0.00 2.62
3222 7255 1.439679 CTTCTTTCGGGTGTGCCTAC 58.560 55.000 0.00 0.00 34.45 3.18
3284 7317 1.402968 TCCGGTAATACGCAGACAGAC 59.597 52.381 0.00 0.00 0.00 3.51
3297 7330 0.389166 GACAGACGGTTCTCAGCCAG 60.389 60.000 0.00 0.00 0.00 4.85
3488 7530 3.211865 GAAACCCGAAACTTCTGTCCTT 58.788 45.455 0.00 0.00 0.00 3.36
3499 7544 5.048846 ACTTCTGTCCTTCTGCCTTTTAA 57.951 39.130 0.00 0.00 0.00 1.52
3767 7842 2.808919 AGAAACCTCGAGACTGGATCA 58.191 47.619 15.71 0.00 0.00 2.92
3838 7913 2.415491 GCCCAATAAGAGCAACGGAAAC 60.415 50.000 0.00 0.00 0.00 2.78
3934 8012 2.746277 CCGGCCCGTTTCCTTCTG 60.746 66.667 0.85 0.00 0.00 3.02
3985 8086 1.949847 ATGTGAGGGCTCGAACTCGG 61.950 60.000 0.00 0.00 40.29 4.63
3986 8087 3.068691 TGAGGGCTCGAACTCGGG 61.069 66.667 0.00 0.00 44.00 5.14
3987 8088 2.754658 GAGGGCTCGAACTCGGGA 60.755 66.667 2.47 0.00 43.86 5.14
3988 8089 2.042843 AGGGCTCGAACTCGGGAT 60.043 61.111 2.47 0.00 43.86 3.85
3989 8090 2.077821 GAGGGCTCGAACTCGGGATC 62.078 65.000 2.47 0.00 43.86 3.36
3990 8091 2.128507 GGGCTCGAACTCGGGATCT 61.129 63.158 2.47 0.00 43.86 2.75
3991 8092 1.360911 GGCTCGAACTCGGGATCTC 59.639 63.158 2.47 0.00 43.86 2.75
3992 8093 1.104577 GGCTCGAACTCGGGATCTCT 61.105 60.000 2.47 0.00 43.86 3.10
3993 8094 0.309612 GCTCGAACTCGGGATCTCTC 59.690 60.000 2.47 0.00 43.86 3.20
3994 8095 0.948678 CTCGAACTCGGGATCTCTCC 59.051 60.000 0.00 0.00 43.86 3.71
3995 8096 0.255033 TCGAACTCGGGATCTCTCCA 59.745 55.000 0.00 0.00 44.08 3.86
3996 8097 1.133761 TCGAACTCGGGATCTCTCCAT 60.134 52.381 0.00 0.00 44.08 3.41
3997 8098 1.683917 CGAACTCGGGATCTCTCCATT 59.316 52.381 0.00 0.00 44.08 3.16
3998 8099 2.544694 CGAACTCGGGATCTCTCCATTG 60.545 54.545 0.00 0.00 44.08 2.82
3999 8100 2.461300 ACTCGGGATCTCTCCATTGA 57.539 50.000 0.00 0.00 44.08 2.57
4000 8101 2.752030 ACTCGGGATCTCTCCATTGAA 58.248 47.619 0.00 0.00 44.08 2.69
4001 8102 3.107601 ACTCGGGATCTCTCCATTGAAA 58.892 45.455 0.00 0.00 44.08 2.69
4002 8103 3.133721 ACTCGGGATCTCTCCATTGAAAG 59.866 47.826 0.00 0.00 44.08 2.62
4003 8104 2.435805 TCGGGATCTCTCCATTGAAAGG 59.564 50.000 0.00 0.00 44.08 3.11
4026 8134 4.511527 GATCTCTCCATTGAAACAGCAGA 58.488 43.478 0.00 0.00 0.00 4.26
4028 8136 3.580022 TCTCTCCATTGAAACAGCAGAGA 59.420 43.478 0.00 0.00 34.01 3.10
4593 8804 9.665719 ACCATTTAAATACCCATTGAACATTTC 57.334 29.630 0.00 0.00 0.00 2.17
4754 9029 9.623687 GTTTTTGATTTCGATGAACTTTTTCTG 57.376 29.630 0.00 0.00 32.36 3.02
4763 9038 6.017933 CGATGAACTTTTTCTGGATTTCGAG 58.982 40.000 0.00 0.00 32.36 4.04
4826 9165 8.652810 ATGAACTTTTTCCAACTTTGATGAAG 57.347 30.769 0.00 0.00 41.32 3.02
4851 9190 9.796120 AGTTTTTGTCAAATTCGATGAACTTTA 57.204 25.926 0.00 0.00 0.00 1.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.095461 GAAGTTGGCCCCAATTCTCTC 58.905 52.381 0.00 0.00 38.28 3.20
4 5 2.760650 CCTAAGAAGTTGGCCCCAATTC 59.239 50.000 0.00 1.69 38.28 2.17
5 6 2.381961 TCCTAAGAAGTTGGCCCCAATT 59.618 45.455 0.00 0.00 38.28 2.32
6 7 2.000048 TCCTAAGAAGTTGGCCCCAAT 59.000 47.619 0.00 0.00 38.28 3.16
8 9 1.451449 TTCCTAAGAAGTTGGCCCCA 58.549 50.000 0.00 0.00 0.00 4.96
9 10 2.828661 ATTCCTAAGAAGTTGGCCCC 57.171 50.000 0.00 0.00 34.86 5.80
10 11 5.949952 TCTTAAATTCCTAAGAAGTTGGCCC 59.050 40.000 0.00 0.00 40.33 5.80
11 12 7.646548 ATCTTAAATTCCTAAGAAGTTGGCC 57.353 36.000 0.00 0.00 40.33 5.36
15 16 9.355916 GCCCATATCTTAAATTCCTAAGAAGTT 57.644 33.333 4.18 0.00 42.56 2.66
16 17 7.661847 CGCCCATATCTTAAATTCCTAAGAAGT 59.338 37.037 4.18 0.00 40.42 3.01
17 18 7.661847 ACGCCCATATCTTAAATTCCTAAGAAG 59.338 37.037 4.18 0.00 40.42 2.85
18 19 7.444183 CACGCCCATATCTTAAATTCCTAAGAA 59.556 37.037 4.18 0.00 40.42 2.52
19 20 6.934645 CACGCCCATATCTTAAATTCCTAAGA 59.065 38.462 2.79 2.79 41.09 2.10
20 21 6.149474 CCACGCCCATATCTTAAATTCCTAAG 59.851 42.308 0.00 0.00 0.00 2.18
21 22 6.001460 CCACGCCCATATCTTAAATTCCTAA 58.999 40.000 0.00 0.00 0.00 2.69
22 23 5.072600 ACCACGCCCATATCTTAAATTCCTA 59.927 40.000 0.00 0.00 0.00 2.94
23 24 4.141251 ACCACGCCCATATCTTAAATTCCT 60.141 41.667 0.00 0.00 0.00 3.36
24 25 4.023193 CACCACGCCCATATCTTAAATTCC 60.023 45.833 0.00 0.00 0.00 3.01
25 26 4.578928 ACACCACGCCCATATCTTAAATTC 59.421 41.667 0.00 0.00 0.00 2.17
26 27 4.532834 ACACCACGCCCATATCTTAAATT 58.467 39.130 0.00 0.00 0.00 1.82
27 28 4.164843 ACACCACGCCCATATCTTAAAT 57.835 40.909 0.00 0.00 0.00 1.40
28 29 3.637911 ACACCACGCCCATATCTTAAA 57.362 42.857 0.00 0.00 0.00 1.52
29 30 3.537580 GAACACCACGCCCATATCTTAA 58.462 45.455 0.00 0.00 0.00 1.85
30 31 2.158871 GGAACACCACGCCCATATCTTA 60.159 50.000 0.00 0.00 0.00 2.10
31 32 1.408266 GGAACACCACGCCCATATCTT 60.408 52.381 0.00 0.00 0.00 2.40
32 33 0.180406 GGAACACCACGCCCATATCT 59.820 55.000 0.00 0.00 0.00 1.98
33 34 1.157870 CGGAACACCACGCCCATATC 61.158 60.000 0.00 0.00 0.00 1.63
34 35 1.153249 CGGAACACCACGCCCATAT 60.153 57.895 0.00 0.00 0.00 1.78
35 36 2.266372 CGGAACACCACGCCCATA 59.734 61.111 0.00 0.00 0.00 2.74
36 37 4.715523 CCGGAACACCACGCCCAT 62.716 66.667 0.00 0.00 0.00 4.00
39 40 4.629523 TTCCCGGAACACCACGCC 62.630 66.667 0.73 0.00 0.00 5.68
40 41 2.592287 TTTCCCGGAACACCACGC 60.592 61.111 0.73 0.00 0.00 5.34
41 42 0.533308 TTCTTTCCCGGAACACCACG 60.533 55.000 0.73 0.00 0.00 4.94
42 43 1.682740 TTTCTTTCCCGGAACACCAC 58.317 50.000 0.73 0.00 0.00 4.16
43 44 2.438800 TTTTCTTTCCCGGAACACCA 57.561 45.000 0.73 0.00 0.00 4.17
60 61 9.201989 GATTCCCACTTCTCCCTTAATATTTTT 57.798 33.333 0.00 0.00 0.00 1.94
61 62 7.502561 CGATTCCCACTTCTCCCTTAATATTTT 59.497 37.037 0.00 0.00 0.00 1.82
62 63 6.998673 CGATTCCCACTTCTCCCTTAATATTT 59.001 38.462 0.00 0.00 0.00 1.40
63 64 6.329197 TCGATTCCCACTTCTCCCTTAATATT 59.671 38.462 0.00 0.00 0.00 1.28
64 65 5.844516 TCGATTCCCACTTCTCCCTTAATAT 59.155 40.000 0.00 0.00 0.00 1.28
65 66 5.213519 TCGATTCCCACTTCTCCCTTAATA 58.786 41.667 0.00 0.00 0.00 0.98
66 67 4.037927 TCGATTCCCACTTCTCCCTTAAT 58.962 43.478 0.00 0.00 0.00 1.40
67 68 3.446968 TCGATTCCCACTTCTCCCTTAA 58.553 45.455 0.00 0.00 0.00 1.85
68 69 3.110293 TCGATTCCCACTTCTCCCTTA 57.890 47.619 0.00 0.00 0.00 2.69
69 70 1.952621 TCGATTCCCACTTCTCCCTT 58.047 50.000 0.00 0.00 0.00 3.95
70 71 1.555533 GTTCGATTCCCACTTCTCCCT 59.444 52.381 0.00 0.00 0.00 4.20
71 72 1.407025 GGTTCGATTCCCACTTCTCCC 60.407 57.143 0.00 0.00 0.00 4.30
72 73 1.555533 AGGTTCGATTCCCACTTCTCC 59.444 52.381 3.93 0.00 0.00 3.71
73 74 2.622436 CAGGTTCGATTCCCACTTCTC 58.378 52.381 3.93 0.00 0.00 2.87
74 75 1.339151 GCAGGTTCGATTCCCACTTCT 60.339 52.381 3.93 0.00 0.00 2.85
75 76 1.087501 GCAGGTTCGATTCCCACTTC 58.912 55.000 3.93 0.00 0.00 3.01
76 77 0.400213 TGCAGGTTCGATTCCCACTT 59.600 50.000 3.93 0.00 0.00 3.16
77 78 0.321653 GTGCAGGTTCGATTCCCACT 60.322 55.000 0.00 0.00 0.00 4.00
78 79 1.305930 GGTGCAGGTTCGATTCCCAC 61.306 60.000 0.00 5.99 0.00 4.61
79 80 1.002624 GGTGCAGGTTCGATTCCCA 60.003 57.895 0.00 0.00 0.00 4.37
80 81 2.106683 CGGTGCAGGTTCGATTCCC 61.107 63.158 0.00 0.00 0.00 3.97
81 82 2.750888 GCGGTGCAGGTTCGATTCC 61.751 63.158 0.00 0.00 0.00 3.01
82 83 1.369091 ATGCGGTGCAGGTTCGATTC 61.369 55.000 0.00 0.00 43.65 2.52
83 84 1.377202 ATGCGGTGCAGGTTCGATT 60.377 52.632 0.00 0.00 43.65 3.34
84 85 2.108514 CATGCGGTGCAGGTTCGAT 61.109 57.895 0.00 0.00 43.65 3.59
85 86 2.741985 CATGCGGTGCAGGTTCGA 60.742 61.111 0.00 0.00 43.65 3.71
86 87 3.803082 CCATGCGGTGCAGGTTCG 61.803 66.667 2.65 0.00 43.65 3.95
87 88 2.672996 ACCATGCGGTGCAGGTTC 60.673 61.111 2.65 0.00 46.79 3.62
96 97 2.923020 GCTGATTTTTGTTACCATGCGG 59.077 45.455 0.00 0.00 38.77 5.69
97 98 3.573598 TGCTGATTTTTGTTACCATGCG 58.426 40.909 0.00 0.00 0.00 4.73
98 99 3.928375 CCTGCTGATTTTTGTTACCATGC 59.072 43.478 0.00 0.00 0.00 4.06
99 100 5.389859 TCCTGCTGATTTTTGTTACCATG 57.610 39.130 0.00 0.00 0.00 3.66
100 101 6.418057 TTTCCTGCTGATTTTTGTTACCAT 57.582 33.333 0.00 0.00 0.00 3.55
101 102 5.860941 TTTCCTGCTGATTTTTGTTACCA 57.139 34.783 0.00 0.00 0.00 3.25
102 103 6.928492 TCATTTTCCTGCTGATTTTTGTTACC 59.072 34.615 0.00 0.00 0.00 2.85
103 104 7.095649 GGTCATTTTCCTGCTGATTTTTGTTAC 60.096 37.037 0.00 0.00 0.00 2.50
104 105 6.928492 GGTCATTTTCCTGCTGATTTTTGTTA 59.072 34.615 0.00 0.00 0.00 2.41
105 106 5.759763 GGTCATTTTCCTGCTGATTTTTGTT 59.240 36.000 0.00 0.00 0.00 2.83
106 107 5.163322 TGGTCATTTTCCTGCTGATTTTTGT 60.163 36.000 0.00 0.00 0.00 2.83
107 108 5.178067 GTGGTCATTTTCCTGCTGATTTTTG 59.822 40.000 0.00 0.00 0.00 2.44
108 109 5.070847 AGTGGTCATTTTCCTGCTGATTTTT 59.929 36.000 0.00 0.00 0.00 1.94
118 119 2.065799 AGGTCCAGTGGTCATTTTCCT 58.934 47.619 9.54 4.44 0.00 3.36
142 143 3.262420 CGGAATCTAGACAACCAAGTGG 58.738 50.000 0.00 0.00 42.17 4.00
157 158 5.054390 TCAATAGGTTTGTTTGCGGAATC 57.946 39.130 0.00 0.00 0.00 2.52
272 276 1.757682 TCCGTGCTGGTGAACTTTTT 58.242 45.000 0.00 0.00 39.52 1.94
273 277 1.757682 TTCCGTGCTGGTGAACTTTT 58.242 45.000 0.00 0.00 39.52 2.27
274 278 1.757682 TTTCCGTGCTGGTGAACTTT 58.242 45.000 0.00 0.00 39.52 2.66
275 279 1.676006 CTTTTCCGTGCTGGTGAACTT 59.324 47.619 0.00 0.00 39.52 2.66
276 280 1.134220 TCTTTTCCGTGCTGGTGAACT 60.134 47.619 0.00 0.00 39.52 3.01
277 281 1.264288 CTCTTTTCCGTGCTGGTGAAC 59.736 52.381 0.00 0.00 39.52 3.18
278 282 1.134220 ACTCTTTTCCGTGCTGGTGAA 60.134 47.619 0.00 0.00 39.52 3.18
279 283 0.468226 ACTCTTTTCCGTGCTGGTGA 59.532 50.000 0.00 0.00 39.52 4.02
280 284 1.308998 AACTCTTTTCCGTGCTGGTG 58.691 50.000 0.00 0.00 39.52 4.17
281 285 2.052782 AAACTCTTTTCCGTGCTGGT 57.947 45.000 0.00 0.00 39.52 4.00
282 286 4.036380 ACTTTAAACTCTTTTCCGTGCTGG 59.964 41.667 0.00 0.00 40.09 4.85
283 287 5.169836 ACTTTAAACTCTTTTCCGTGCTG 57.830 39.130 0.00 0.00 0.00 4.41
284 288 5.830000 AACTTTAAACTCTTTTCCGTGCT 57.170 34.783 0.00 0.00 0.00 4.40
285 289 6.031471 TCAAACTTTAAACTCTTTTCCGTGC 58.969 36.000 0.00 0.00 0.00 5.34
286 290 8.455598 TTTCAAACTTTAAACTCTTTTCCGTG 57.544 30.769 0.00 0.00 0.00 4.94
287 291 9.647797 ATTTTCAAACTTTAAACTCTTTTCCGT 57.352 25.926 0.00 0.00 0.00 4.69
288 292 9.900264 CATTTTCAAACTTTAAACTCTTTTCCG 57.100 29.630 0.00 0.00 0.00 4.30
456 466 9.423061 CGAAATCCCAAGAACATCTTTAAAATT 57.577 29.630 0.00 0.00 33.78 1.82
457 467 8.802267 TCGAAATCCCAAGAACATCTTTAAAAT 58.198 29.630 0.00 0.00 33.78 1.82
461 471 7.753309 TTTCGAAATCCCAAGAACATCTTTA 57.247 32.000 6.47 0.00 33.78 1.85
467 477 5.845391 ACTTTTTCGAAATCCCAAGAACA 57.155 34.783 21.13 0.00 0.00 3.18
488 498 9.825972 TTGACGATTTTTCTAAAGATGATGAAC 57.174 29.630 0.00 0.00 0.00 3.18
502 512 9.767684 AACTTTTTCCAAAATTGACGATTTTTC 57.232 25.926 10.21 0.00 43.65 2.29
508 518 5.513495 CACGAACTTTTTCCAAAATTGACGA 59.487 36.000 0.00 0.00 0.00 4.20
509 519 5.513495 TCACGAACTTTTTCCAAAATTGACG 59.487 36.000 0.00 0.00 0.00 4.35
510 520 6.879188 TCACGAACTTTTTCCAAAATTGAC 57.121 33.333 0.00 0.00 0.00 3.18
511 521 7.891183 TTTCACGAACTTTTTCCAAAATTGA 57.109 28.000 0.00 0.00 0.00 2.57
512 522 8.941127 TTTTTCACGAACTTTTTCCAAAATTG 57.059 26.923 0.00 0.00 0.00 2.32
513 523 9.553418 CATTTTTCACGAACTTTTTCCAAAATT 57.447 25.926 0.00 0.00 0.00 1.82
514 524 8.180920 CCATTTTTCACGAACTTTTTCCAAAAT 58.819 29.630 0.00 0.00 0.00 1.82
515 525 7.387948 TCCATTTTTCACGAACTTTTTCCAAAA 59.612 29.630 0.00 0.00 0.00 2.44
516 526 6.874134 TCCATTTTTCACGAACTTTTTCCAAA 59.126 30.769 0.00 0.00 0.00 3.28
519 529 6.895607 TTCCATTTTTCACGAACTTTTTCC 57.104 33.333 0.00 0.00 0.00 3.13
557 567 9.388506 TGCACTTTTTCCAAATTTGATAAAGAA 57.611 25.926 27.49 17.93 0.00 2.52
558 568 8.954950 TGCACTTTTTCCAAATTTGATAAAGA 57.045 26.923 27.49 18.66 0.00 2.52
559 569 9.601971 CATGCACTTTTTCCAAATTTGATAAAG 57.398 29.630 19.86 22.13 0.00 1.85
565 575 5.171147 TGCATGCACTTTTTCCAAATTTG 57.829 34.783 18.46 11.40 0.00 2.32
566 576 6.394025 AATGCATGCACTTTTTCCAAATTT 57.606 29.167 25.37 5.44 0.00 1.82
571 581 4.880120 TCAAAAATGCATGCACTTTTTCCA 59.120 33.333 31.00 21.68 33.86 3.53
572 582 5.421212 TCAAAAATGCATGCACTTTTTCC 57.579 34.783 31.00 0.00 33.86 3.13
638 648 2.294791 TCGCCGTTCATTGGTTGATTTT 59.705 40.909 0.00 0.00 33.34 1.82
641 651 1.529226 TTCGCCGTTCATTGGTTGAT 58.471 45.000 0.00 0.00 33.34 2.57
642 652 1.529226 ATTCGCCGTTCATTGGTTGA 58.471 45.000 0.00 0.00 0.00 3.18
643 653 2.418628 ACTATTCGCCGTTCATTGGTTG 59.581 45.455 0.00 0.00 0.00 3.77
645 655 2.396590 ACTATTCGCCGTTCATTGGT 57.603 45.000 0.00 0.00 0.00 3.67
646 656 3.713288 TCTACTATTCGCCGTTCATTGG 58.287 45.455 0.00 0.00 0.00 3.16
647 657 5.291128 ACTTTCTACTATTCGCCGTTCATTG 59.709 40.000 0.00 0.00 0.00 2.82
650 660 4.445452 ACTTTCTACTATTCGCCGTTCA 57.555 40.909 0.00 0.00 0.00 3.18
651 661 8.566008 TTTATACTTTCTACTATTCGCCGTTC 57.434 34.615 0.00 0.00 0.00 3.95
652 662 8.931385 TTTTATACTTTCTACTATTCGCCGTT 57.069 30.769 0.00 0.00 0.00 4.44
653 663 8.931385 TTTTTATACTTTCTACTATTCGCCGT 57.069 30.769 0.00 0.00 0.00 5.68
654 664 9.241317 TCTTTTTATACTTTCTACTATTCGCCG 57.759 33.333 0.00 0.00 0.00 6.46
699 1643 3.695060 AGTAGGATACCTCAACGAGTGTG 59.305 47.826 0.00 0.00 44.47 3.82
706 1650 6.604795 TGTAACCACTAGTAGGATACCTCAAC 59.395 42.308 19.47 6.34 44.47 3.18
738 1682 7.891183 TTTCTCTTTCCTCATCTTTAGTTCG 57.109 36.000 0.00 0.00 0.00 3.95
781 1725 2.436646 CAATCCCTTGCGCTCGGT 60.437 61.111 9.73 0.00 0.00 4.69
789 1733 1.696063 CACCCTATGGCAATCCCTTG 58.304 55.000 0.00 0.00 35.36 3.61
791 1735 1.538666 GCACCCTATGGCAATCCCT 59.461 57.895 0.00 0.00 33.59 4.20
792 1736 4.181051 GCACCCTATGGCAATCCC 57.819 61.111 0.00 0.00 33.59 3.85
802 1800 2.034999 CCCTTTTGCGGCACCCTA 59.965 61.111 0.05 0.00 0.00 3.53
827 1825 0.179108 CGGGAGGAGGAATCGAACAC 60.179 60.000 0.00 0.00 0.00 3.32
923 3190 3.557290 GGACCATACGGGGAGCCC 61.557 72.222 0.00 0.00 42.91 5.19
924 3191 2.766651 TGGACCATACGGGGAGCC 60.767 66.667 0.00 0.00 42.91 4.70
925 3192 1.335132 TTCTGGACCATACGGGGAGC 61.335 60.000 0.00 0.00 42.91 4.70
932 4672 3.926058 TTTAGGCCTTCTGGACCATAC 57.074 47.619 12.58 0.00 44.45 2.39
985 4731 4.337060 GGGCGCACACGGGAAAAC 62.337 66.667 10.83 0.00 40.57 2.43
1006 4752 3.056821 CCGGAAAGGAAAGGGAAAATCAC 60.057 47.826 0.00 0.00 45.00 3.06
1007 4753 3.161866 CCGGAAAGGAAAGGGAAAATCA 58.838 45.455 0.00 0.00 45.00 2.57
1008 4754 3.162666 ACCGGAAAGGAAAGGGAAAATC 58.837 45.455 9.46 0.00 45.00 2.17
1009 4755 3.162666 GACCGGAAAGGAAAGGGAAAAT 58.837 45.455 9.46 0.00 45.00 1.82
1010 4756 2.589720 GACCGGAAAGGAAAGGGAAAA 58.410 47.619 9.46 0.00 45.00 2.29
1073 4824 1.543896 TTGGAGGAAGGGGGAAGGG 60.544 63.158 0.00 0.00 0.00 3.95
1100 4851 0.453390 CAGGAGATTTGGCTTTCGGC 59.547 55.000 0.00 0.00 40.90 5.54
1101 4852 0.453390 GCAGGAGATTTGGCTTTCGG 59.547 55.000 0.00 0.00 0.00 4.30
1118 4869 1.625818 GGAGAGGAGGAAGAAGTTGCA 59.374 52.381 0.00 0.00 0.00 4.08
1119 4870 1.065782 GGGAGAGGAGGAAGAAGTTGC 60.066 57.143 0.00 0.00 0.00 4.17
1120 4871 1.557371 GGGGAGAGGAGGAAGAAGTTG 59.443 57.143 0.00 0.00 0.00 3.16
1122 4873 0.043485 GGGGGAGAGGAGGAAGAAGT 59.957 60.000 0.00 0.00 0.00 3.01
1123 4874 0.341609 AGGGGGAGAGGAGGAAGAAG 59.658 60.000 0.00 0.00 0.00 2.85
1125 4876 0.556380 AGAGGGGGAGAGGAGGAAGA 60.556 60.000 0.00 0.00 0.00 2.87
1127 4878 1.595058 GGAGAGGGGGAGAGGAGGAA 61.595 65.000 0.00 0.00 0.00 3.36
1211 4967 8.820831 AGATAGGAATGGATCGAGTATTGATTT 58.179 33.333 0.00 0.00 39.98 2.17
1266 5022 5.105023 ACCGTATAGACAGACTACTGACTCA 60.105 44.000 0.00 0.00 44.81 3.41
1292 5048 4.137872 CCCGACGCACCGTGGTAT 62.138 66.667 0.00 0.00 41.37 2.73
1329 5092 2.031870 ACCCACAAGAAAAGTTCTGCC 58.968 47.619 0.00 0.00 40.59 4.85
1368 5136 1.004560 CACCAAGAGAGCCAAGCGA 60.005 57.895 0.00 0.00 0.00 4.93
1369 5137 0.037326 TACACCAAGAGAGCCAAGCG 60.037 55.000 0.00 0.00 0.00 4.68
1416 5184 0.841984 CCTCGCGTTTTCGGTATACG 59.158 55.000 5.77 0.00 44.29 3.06
1417 5185 2.114825 CTCCTCGCGTTTTCGGTATAC 58.885 52.381 5.77 0.00 44.29 1.47
1457 5225 1.736645 ACACGGGCATTTCGACGAG 60.737 57.895 0.00 0.00 0.00 4.18
1497 5265 9.892130 AGTAGAGGAATCTCGAATAAAATGTTT 57.108 29.630 0.00 0.00 44.47 2.83
1509 5277 4.993029 AGACCAAAGTAGAGGAATCTCG 57.007 45.455 0.00 0.00 44.47 4.04
1517 5285 1.079503 GGCGCAAGACCAAAGTAGAG 58.920 55.000 10.83 0.00 42.36 2.43
1529 5300 2.043980 AATACAACGGGGGCGCAAG 61.044 57.895 10.83 0.00 43.44 4.01
1535 5316 1.450669 CGGGTCAATACAACGGGGG 60.451 63.158 0.00 0.00 0.00 5.40
1539 5320 4.201744 GGTACAATTCGGGTCAATACAACG 60.202 45.833 0.00 0.00 0.00 4.10
1540 5321 4.696402 TGGTACAATTCGGGTCAATACAAC 59.304 41.667 0.00 0.00 31.92 3.32
1562 5344 6.312426 ACTCTACAGATTCAGAAATTTCGCTG 59.688 38.462 12.42 15.90 0.00 5.18
1571 5353 5.447413 CGCGTAGAACTCTACAGATTCAGAA 60.447 44.000 15.39 0.00 46.92 3.02
1591 5373 1.062587 GCTGAATTAGAATGCACGCGT 59.937 47.619 5.58 5.58 0.00 6.01
1614 5396 5.184096 ACCAATTACATGAAAATACGGCACA 59.816 36.000 0.00 0.00 0.00 4.57
1642 5443 4.081917 GGTGGGAGAACAGAAAAACAACAA 60.082 41.667 0.00 0.00 0.00 2.83
1652 5453 4.453480 AAATTCAAGGTGGGAGAACAGA 57.547 40.909 0.00 0.00 0.00 3.41
1698 5502 1.704641 AAGAGAGGGGGCAAACAAAC 58.295 50.000 0.00 0.00 0.00 2.93
1699 5503 2.091333 AGAAAGAGAGGGGGCAAACAAA 60.091 45.455 0.00 0.00 0.00 2.83
1700 5504 1.499007 AGAAAGAGAGGGGGCAAACAA 59.501 47.619 0.00 0.00 0.00 2.83
1701 5505 1.073923 GAGAAAGAGAGGGGGCAAACA 59.926 52.381 0.00 0.00 0.00 2.83
1766 5573 7.614974 TGTATTGATTCCAGATCCATGAACAAA 59.385 33.333 0.00 0.00 0.00 2.83
1768 5575 6.543465 GTGTATTGATTCCAGATCCATGAACA 59.457 38.462 0.00 0.00 0.00 3.18
1802 5609 0.040067 CCCAGAACAAGCGACAAAGC 60.040 55.000 0.00 0.00 37.41 3.51
1846 5653 7.728410 GCTTTAGCCAAATCGTGTAAACGATAT 60.728 37.037 20.91 8.96 42.44 1.63
1864 5671 6.822170 AGGTTAAGTACTACAATGCTTTAGCC 59.178 38.462 0.00 0.00 41.18 3.93
1898 5705 0.961753 CCAGGTTTTCCAGTTCCAGC 59.038 55.000 0.00 0.00 43.73 4.85
1920 5727 8.634444 TGGTGTTAATGCAGTTAATTGTAAAGT 58.366 29.630 0.00 0.00 34.93 2.66
1921 5728 9.638239 ATGGTGTTAATGCAGTTAATTGTAAAG 57.362 29.630 0.00 0.00 34.93 1.85
1922 5729 9.988815 AATGGTGTTAATGCAGTTAATTGTAAA 57.011 25.926 0.00 0.00 34.93 2.01
1923 5730 9.416794 CAATGGTGTTAATGCAGTTAATTGTAA 57.583 29.630 0.00 0.00 34.93 2.41
1924 5731 8.580720 ACAATGGTGTTAATGCAGTTAATTGTA 58.419 29.630 0.00 0.00 32.70 2.41
1925 5732 7.441017 ACAATGGTGTTAATGCAGTTAATTGT 58.559 30.769 0.00 0.00 32.58 2.71
1926 5733 7.887996 ACAATGGTGTTAATGCAGTTAATTG 57.112 32.000 0.00 0.00 32.58 2.32
1927 5734 9.418045 GTTACAATGGTGTTAATGCAGTTAATT 57.582 29.630 0.00 0.00 39.30 1.40
1928 5735 8.580720 TGTTACAATGGTGTTAATGCAGTTAAT 58.419 29.630 0.00 0.00 39.30 1.40
1929 5736 7.941919 TGTTACAATGGTGTTAATGCAGTTAA 58.058 30.769 0.00 0.00 39.30 2.01
1930 5737 7.511959 TGTTACAATGGTGTTAATGCAGTTA 57.488 32.000 0.00 0.00 39.30 2.24
1931 5738 6.398234 TGTTACAATGGTGTTAATGCAGTT 57.602 33.333 0.00 0.00 39.30 3.16
1935 5742 7.453980 CATCATGTTACAATGGTGTTAATGC 57.546 36.000 0.00 0.00 39.30 3.56
1969 5898 6.369059 AGATGCATCAAATAGCAAGTACAC 57.631 37.500 27.81 0.00 44.88 2.90
1994 5940 9.023962 TCTATACAGAAAAATTGTTGGCATCTT 57.976 29.630 0.00 0.00 0.00 2.40
2017 5963 3.819564 ACAGCGCAATATCCTGTTCTA 57.180 42.857 11.47 0.00 36.48 2.10
2023 5969 4.408182 AGTAAGAACAGCGCAATATCCT 57.592 40.909 11.47 0.00 0.00 3.24
2034 5980 5.388408 ACGAAGGGAGTAAGTAAGAACAG 57.612 43.478 0.00 0.00 0.00 3.16
2037 5983 3.441572 CGGACGAAGGGAGTAAGTAAGAA 59.558 47.826 0.00 0.00 0.00 2.52
2039 5985 2.098770 CCGGACGAAGGGAGTAAGTAAG 59.901 54.545 0.00 0.00 0.00 2.34
2045 5991 1.856629 ATTTCCGGACGAAGGGAGTA 58.143 50.000 1.83 0.00 33.01 2.59
2046 5992 1.479730 GTATTTCCGGACGAAGGGAGT 59.520 52.381 1.83 0.00 33.01 3.85
2047 5993 1.755380 AGTATTTCCGGACGAAGGGAG 59.245 52.381 1.83 0.00 33.01 4.30
2048 5994 1.856629 AGTATTTCCGGACGAAGGGA 58.143 50.000 1.83 0.00 0.00 4.20
2049 5995 2.277084 CAAGTATTTCCGGACGAAGGG 58.723 52.381 1.83 0.00 0.00 3.95
2050 5996 2.928116 GACAAGTATTTCCGGACGAAGG 59.072 50.000 1.83 0.00 0.00 3.46
2051 5997 3.581755 TGACAAGTATTTCCGGACGAAG 58.418 45.455 1.83 0.00 0.00 3.79
2052 5998 3.663995 TGACAAGTATTTCCGGACGAA 57.336 42.857 1.83 0.00 0.00 3.85
2053 5999 3.193903 TGATGACAAGTATTTCCGGACGA 59.806 43.478 1.83 0.00 0.00 4.20
2054 6000 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
2055 6001 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
2056 6002 6.657117 TCATTTTGATGACAAGTATTTCCGGA 59.343 34.615 0.00 0.00 37.32 5.14
2057 6003 6.851609 TCATTTTGATGACAAGTATTTCCGG 58.148 36.000 0.00 0.00 37.32 5.14
2058 6004 8.915871 ATTCATTTTGATGACAAGTATTTCCG 57.084 30.769 0.00 0.00 37.32 4.30
2065 6011 9.918630 CTCCTTTTATTCATTTTGATGACAAGT 57.081 29.630 0.00 0.00 37.32 3.16
2079 6025 9.132923 ACGTCTAGATACATCTCCTTTTATTCA 57.867 33.333 0.00 0.00 38.32 2.57
2087 6033 9.796180 ACTAAAATACGTCTAGATACATCTCCT 57.204 33.333 0.00 0.00 38.32 3.69
2101 6047 9.242477 GGGTTGTATCTAGAACTAAAATACGTC 57.758 37.037 0.00 0.00 30.96 4.34
2102 6048 8.975295 AGGGTTGTATCTAGAACTAAAATACGT 58.025 33.333 0.00 0.00 30.96 3.57
2103 6049 9.813446 AAGGGTTGTATCTAGAACTAAAATACG 57.187 33.333 0.00 0.00 30.96 3.06
2111 6057 8.832735 TGGATAAAAAGGGTTGTATCTAGAACT 58.167 33.333 0.00 0.00 35.17 3.01
2112 6058 9.628500 ATGGATAAAAAGGGTTGTATCTAGAAC 57.372 33.333 0.00 0.00 35.17 3.01
2117 6063 9.320295 TCAAAATGGATAAAAAGGGTTGTATCT 57.680 29.630 0.00 0.00 35.17 1.98
2119 6065 9.889128 CATCAAAATGGATAAAAAGGGTTGTAT 57.111 29.630 0.00 0.00 0.00 2.29
2120 6066 9.094578 TCATCAAAATGGATAAAAAGGGTTGTA 57.905 29.630 0.00 0.00 33.42 2.41
2121 6067 7.877612 GTCATCAAAATGGATAAAAAGGGTTGT 59.122 33.333 0.00 0.00 33.42 3.32
2122 6068 7.877097 TGTCATCAAAATGGATAAAAAGGGTTG 59.123 33.333 0.00 0.00 33.42 3.77
2123 6069 7.972301 TGTCATCAAAATGGATAAAAAGGGTT 58.028 30.769 0.00 0.00 33.42 4.11
2124 6070 7.552050 TGTCATCAAAATGGATAAAAAGGGT 57.448 32.000 0.00 0.00 33.42 4.34
2125 6071 8.096414 ACTTGTCATCAAAATGGATAAAAAGGG 58.904 33.333 0.00 0.00 33.42 3.95
2133 6079 7.975616 CCGAAAATACTTGTCATCAAAATGGAT 59.024 33.333 0.00 0.00 33.42 3.41
2134 6080 7.175816 TCCGAAAATACTTGTCATCAAAATGGA 59.824 33.333 0.00 0.00 33.42 3.41
2135 6081 7.273381 GTCCGAAAATACTTGTCATCAAAATGG 59.727 37.037 0.00 0.00 33.42 3.16
2136 6082 7.007367 CGTCCGAAAATACTTGTCATCAAAATG 59.993 37.037 0.00 0.00 32.87 2.32
2137 6083 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
2138 6084 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
2139 6085 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
2140 6086 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
2141 6087 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
2142 6088 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
2143 6089 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
2144 6090 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
2145 6091 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
2146 6092 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
2147 6093 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
2148 6094 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
2149 6095 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
2150 6096 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
2151 6097 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
2152 6098 1.856629 TACTCCCTCCGTCCGAAAAT 58.143 50.000 0.00 0.00 0.00 1.82
2153 6099 1.856629 ATACTCCCTCCGTCCGAAAA 58.143 50.000 0.00 0.00 0.00 2.29
2154 6100 2.734755 TATACTCCCTCCGTCCGAAA 57.265 50.000 0.00 0.00 0.00 3.46
2155 6101 2.965671 ATATACTCCCTCCGTCCGAA 57.034 50.000 0.00 0.00 0.00 4.30
2156 6102 2.965671 AATATACTCCCTCCGTCCGA 57.034 50.000 0.00 0.00 0.00 4.55
2157 6103 4.614535 CGTAAAATATACTCCCTCCGTCCG 60.615 50.000 0.00 0.00 0.00 4.79
2158 6104 4.802999 CGTAAAATATACTCCCTCCGTCC 58.197 47.826 0.00 0.00 0.00 4.79
2159 6105 4.233005 GCGTAAAATATACTCCCTCCGTC 58.767 47.826 0.00 0.00 0.00 4.79
2160 6106 3.638160 TGCGTAAAATATACTCCCTCCGT 59.362 43.478 0.00 0.00 0.00 4.69
2161 6107 4.247267 TGCGTAAAATATACTCCCTCCG 57.753 45.455 0.00 0.00 0.00 4.63
2162 6108 5.995897 ACAATGCGTAAAATATACTCCCTCC 59.004 40.000 0.00 0.00 0.00 4.30
2163 6109 7.492352 AACAATGCGTAAAATATACTCCCTC 57.508 36.000 0.00 0.00 0.00 4.30
2164 6110 7.875327 AAACAATGCGTAAAATATACTCCCT 57.125 32.000 0.00 0.00 0.00 4.20
2165 6111 9.659830 CTAAAACAATGCGTAAAATATACTCCC 57.340 33.333 0.00 0.00 0.00 4.30
2333 6311 0.031994 GCCACAACAAAACAGGCGAT 59.968 50.000 0.00 0.00 35.42 4.58
2336 6314 0.175531 AGTGCCACAACAAAACAGGC 59.824 50.000 0.00 0.00 45.41 4.85
2345 6323 3.406764 AGATTGAAGAGAGTGCCACAAC 58.593 45.455 0.00 0.00 0.00 3.32
2350 6328 3.936564 ACTTGAGATTGAAGAGAGTGCC 58.063 45.455 0.00 0.00 0.00 5.01
2445 6424 7.412137 ACATTTCATTTTGAACAGCTTTAGC 57.588 32.000 0.00 0.00 35.89 3.09
2448 6427 8.819974 CAGTTACATTTCATTTTGAACAGCTTT 58.180 29.630 0.00 0.00 35.89 3.51
2517 6496 1.583054 CTGCGGGTTGCCTATTCTAC 58.417 55.000 0.00 0.00 45.60 2.59
2561 6540 8.958060 ATACTCTGACTATGGAAAGGCTTATA 57.042 34.615 0.00 0.00 0.00 0.98
2562 6541 7.863901 ATACTCTGACTATGGAAAGGCTTAT 57.136 36.000 0.00 0.00 0.00 1.73
2592 6571 4.632538 AAACGGGCATTAATCTACTTGC 57.367 40.909 0.00 0.00 0.00 4.01
2667 6646 5.732331 TCAATCAGGGAAGGGACATAAAT 57.268 39.130 0.00 0.00 0.00 1.40
2668 6647 5.528600 TTCAATCAGGGAAGGGACATAAA 57.471 39.130 0.00 0.00 0.00 1.40
2669 6648 5.044179 ACATTCAATCAGGGAAGGGACATAA 60.044 40.000 0.00 0.00 30.81 1.90
2670 6649 4.478317 ACATTCAATCAGGGAAGGGACATA 59.522 41.667 0.00 0.00 30.81 2.29
2671 6650 3.270433 ACATTCAATCAGGGAAGGGACAT 59.730 43.478 0.00 0.00 30.81 3.06
2672 6651 2.649312 ACATTCAATCAGGGAAGGGACA 59.351 45.455 0.00 0.00 30.81 4.02
2673 6652 3.019564 CACATTCAATCAGGGAAGGGAC 58.980 50.000 0.00 0.00 30.81 4.46
2733 6712 6.877322 GCAAAGAAGTGTTCAGGGTAGTATTA 59.123 38.462 0.00 0.00 0.00 0.98
2830 6852 2.403252 AACTACCACAGGCATACAGC 57.597 50.000 0.00 0.00 44.65 4.40
2831 6853 8.677148 ATTATTTAACTACCACAGGCATACAG 57.323 34.615 0.00 0.00 0.00 2.74
2883 6907 6.352737 GGGAAGGGACACAGATGTTTATAAGA 60.353 42.308 0.00 0.00 39.95 2.10
2889 6913 2.065799 AGGGAAGGGACACAGATGTTT 58.934 47.619 0.00 0.00 39.95 2.83
2895 6919 4.510167 ATTTATCAGGGAAGGGACACAG 57.490 45.455 0.00 0.00 0.00 3.66
3017 7044 5.970592 TGGAGTCAATGTCAATACTGAGAG 58.029 41.667 0.00 0.00 30.14 3.20
3033 7060 2.371841 AGGTTGTGTATTGCTGGAGTCA 59.628 45.455 0.00 0.00 0.00 3.41
3036 7063 2.086869 CCAGGTTGTGTATTGCTGGAG 58.913 52.381 0.00 0.00 32.70 3.86
3065 7093 1.002468 CAAGAACTGAAACAGGTGGCG 60.002 52.381 0.00 0.00 35.51 5.69
3117 7149 3.874383 TCAGGGAAGGAACACAAATGA 57.126 42.857 0.00 0.00 0.00 2.57
3202 7234 0.321298 TAGGCACACCCGAAAGAAGC 60.321 55.000 0.00 0.00 39.21 3.86
3210 7242 2.359478 GGTTGGTAGGCACACCCG 60.359 66.667 5.91 0.00 37.84 5.28
3222 7255 1.788229 ACCAAGGGTGAAAAGGTTGG 58.212 50.000 0.00 0.00 42.89 3.77
3284 7317 3.123620 GCAGCTGGCTGAGAACCG 61.124 66.667 24.40 0.00 46.30 4.44
3297 7330 0.746204 GCAGGGTTCTTAGGAGCAGC 60.746 60.000 0.00 0.00 0.00 5.25
3488 7530 5.046950 ACACACCAAAGTTTTAAAAGGCAGA 60.047 36.000 0.00 0.00 0.00 4.26
3499 7544 5.850557 TGATCATGAACACACCAAAGTTT 57.149 34.783 0.00 0.00 0.00 2.66
3730 7781 8.529911 CGAGGTTTCTTACACGAAATTATAGTC 58.470 37.037 0.00 0.00 35.56 2.59
3838 7913 2.923020 GGAAATGCCAATACTTGTTGCG 59.077 45.455 0.00 0.00 36.34 4.85
3848 7923 1.109323 GGCGCCTAGGAAATGCCAAT 61.109 55.000 22.15 0.00 45.06 3.16
3985 8086 4.350520 AGATCCCTTTCAATGGAGAGATCC 59.649 45.833 5.81 0.00 33.27 3.36
3986 8087 5.307716 AGAGATCCCTTTCAATGGAGAGATC 59.692 44.000 0.00 0.00 33.27 2.75
3987 8088 5.226015 AGAGATCCCTTTCAATGGAGAGAT 58.774 41.667 0.00 0.00 33.27 2.75
3988 8089 4.629122 AGAGATCCCTTTCAATGGAGAGA 58.371 43.478 0.00 0.00 33.27 3.10
3989 8090 4.202346 GGAGAGATCCCTTTCAATGGAGAG 60.202 50.000 0.00 0.00 33.27 3.20
3990 8091 3.713764 GGAGAGATCCCTTTCAATGGAGA 59.286 47.826 0.00 0.00 33.27 3.71
3991 8092 3.457380 TGGAGAGATCCCTTTCAATGGAG 59.543 47.826 0.00 0.00 33.27 3.86
3992 8093 3.463825 TGGAGAGATCCCTTTCAATGGA 58.536 45.455 0.00 0.00 34.54 3.41
3993 8094 3.939740 TGGAGAGATCCCTTTCAATGG 57.060 47.619 0.00 0.00 0.00 3.16
3994 8095 5.443283 TCAATGGAGAGATCCCTTTCAATG 58.557 41.667 0.00 0.00 0.00 2.82
3995 8096 5.722172 TCAATGGAGAGATCCCTTTCAAT 57.278 39.130 0.00 0.00 0.00 2.57
3996 8097 5.519183 TTCAATGGAGAGATCCCTTTCAA 57.481 39.130 0.00 0.00 0.00 2.69
3997 8098 5.222109 TGTTTCAATGGAGAGATCCCTTTCA 60.222 40.000 0.00 0.00 0.00 2.69
3998 8099 5.256474 TGTTTCAATGGAGAGATCCCTTTC 58.744 41.667 0.00 0.00 0.00 2.62
3999 8100 5.259632 CTGTTTCAATGGAGAGATCCCTTT 58.740 41.667 0.00 0.00 0.00 3.11
4000 8101 4.853007 CTGTTTCAATGGAGAGATCCCTT 58.147 43.478 0.00 0.00 0.00 3.95
4001 8102 3.371380 GCTGTTTCAATGGAGAGATCCCT 60.371 47.826 0.00 0.00 0.00 4.20
4002 8103 2.948315 GCTGTTTCAATGGAGAGATCCC 59.052 50.000 0.00 0.00 0.00 3.85
4003 8104 3.614092 TGCTGTTTCAATGGAGAGATCC 58.386 45.455 0.00 0.00 0.00 3.36
4026 8134 3.118519 ACGGTTGTCTGTTGGTTAGTTCT 60.119 43.478 0.00 0.00 0.00 3.01
4028 8136 3.271055 ACGGTTGTCTGTTGGTTAGTT 57.729 42.857 0.00 0.00 0.00 2.24
4095 8206 3.621805 TTTGGTGGGCTCTCGCGA 61.622 61.111 9.26 9.26 36.88 5.87
4721 8975 7.432252 AGTTCATCGAAATCAAAAACAGTTCAC 59.568 33.333 0.00 0.00 0.00 3.18
4728 9002 9.623687 CAGAAAAAGTTCATCGAAATCAAAAAC 57.376 29.630 0.00 0.00 36.09 2.43
4732 9006 7.270757 TCCAGAAAAAGTTCATCGAAATCAA 57.729 32.000 0.00 0.00 36.09 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.