Multiple sequence alignment - TraesCS4D01G056000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G056000 chr4D 100.000 4074 0 0 1 4074 31338060 31333987 0.000000e+00 7524.0
1 TraesCS4D01G056000 chr4D 90.634 694 42 17 3271 3958 307226531 307225855 0.000000e+00 900.0
2 TraesCS4D01G056000 chr4D 78.095 315 51 14 1662 1963 31758848 31759157 2.500000e-42 183.0
3 TraesCS4D01G056000 chr4D 95.604 91 4 0 1316 1406 31758460 31758550 3.280000e-31 147.0
4 TraesCS4D01G056000 chr4D 77.224 281 37 13 979 1242 31758098 31758368 5.490000e-29 139.0
5 TraesCS4D01G056000 chr4B 88.485 1485 98 31 700 2142 45192537 45193990 0.000000e+00 1727.0
6 TraesCS4D01G056000 chr4B 82.741 788 84 29 2304 3077 45194013 45194762 0.000000e+00 654.0
7 TraesCS4D01G056000 chr4B 75.202 496 78 24 1129 1603 45200800 45201271 4.160000e-45 193.0
8 TraesCS4D01G056000 chr4B 92.391 92 7 0 3073 3164 45194795 45194886 9.190000e-27 132.0
9 TraesCS4D01G056000 chr7B 93.421 684 42 1 1 681 529156852 529156169 0.000000e+00 1011.0
10 TraesCS4D01G056000 chr3D 92.707 713 32 7 3269 3962 302963199 302963910 0.000000e+00 1011.0
11 TraesCS4D01G056000 chr3D 93.662 142 9 0 2164 2305 147613450 147613309 3.190000e-51 213.0
12 TraesCS4D01G056000 chr3D 92.254 142 11 0 2164 2305 147688172 147688031 6.900000e-48 202.0
13 TraesCS4D01G056000 chr3D 94.595 111 5 1 3965 4074 238554359 238554249 1.950000e-38 171.0
14 TraesCS4D01G056000 chr3D 92.857 112 8 0 3963 4074 149008860 149008749 3.260000e-36 163.0
15 TraesCS4D01G056000 chr4A 89.962 787 55 15 2307 3077 571046666 571045888 0.000000e+00 994.0
16 TraesCS4D01G056000 chr4A 86.433 855 58 22 798 1607 571048040 571047199 0.000000e+00 883.0
17 TraesCS4D01G056000 chr4A 90.103 485 30 9 1668 2142 571047164 571046688 7.480000e-172 614.0
18 TraesCS4D01G056000 chr4A 89.340 197 21 0 3073 3269 571045855 571045659 8.740000e-62 248.0
19 TraesCS4D01G056000 chr1D 92.190 717 34 7 3267 3964 139045337 139044624 0.000000e+00 994.0
20 TraesCS4D01G056000 chr1D 89.379 725 53 9 3259 3961 352183581 352184303 0.000000e+00 891.0
21 TraesCS4D01G056000 chr1D 88.951 715 51 15 3272 3960 252534275 252534987 0.000000e+00 857.0
22 TraesCS4D01G056000 chr1D 88.277 708 66 9 3271 3962 188094428 188095134 0.000000e+00 832.0
23 TraesCS4D01G056000 chr1D 87.500 704 69 12 3272 3962 133733019 133733716 0.000000e+00 795.0
24 TraesCS4D01G056000 chr1D 86.022 186 23 2 2328 2510 295971257 295971072 3.210000e-46 196.0
25 TraesCS4D01G056000 chr1D 92.105 114 9 0 3961 4074 218882559 218882446 1.170000e-35 161.0
26 TraesCS4D01G056000 chr2D 92.384 709 34 5 3272 3961 483129660 483128953 0.000000e+00 992.0
27 TraesCS4D01G056000 chr2D 92.264 711 35 6 3271 3962 194009482 194008773 0.000000e+00 990.0
28 TraesCS4D01G056000 chr2D 86.027 730 55 17 3272 3960 108773739 108774462 0.000000e+00 739.0
29 TraesCS4D01G056000 chr2D 98.571 140 2 0 2164 2303 2150204 2150065 8.740000e-62 248.0
30 TraesCS4D01G056000 chr6D 89.747 712 49 10 3272 3960 400423632 400424342 0.000000e+00 889.0
31 TraesCS4D01G056000 chr6D 92.373 118 8 1 3957 4074 152394697 152394581 2.520000e-37 167.0
32 TraesCS4D01G056000 chr6D 92.793 111 8 0 3964 4074 399092635 399092525 1.170000e-35 161.0
33 TraesCS4D01G056000 chr6D 78.481 237 38 7 2353 2577 333593548 333593783 4.240000e-30 143.0
34 TraesCS4D01G056000 chr5B 92.000 625 47 2 1 622 17562995 17562371 0.000000e+00 874.0
35 TraesCS4D01G056000 chr6A 88.701 708 60 12 3272 3960 430693824 430694530 0.000000e+00 846.0
36 TraesCS4D01G056000 chr6A 85.859 198 27 1 2377 2574 358593406 358593602 4.130000e-50 209.0
37 TraesCS4D01G056000 chr7A 87.819 706 70 8 3272 3962 296757549 296756845 0.000000e+00 813.0
38 TraesCS4D01G056000 chr5D 87.201 711 62 22 3271 3960 369879715 369879013 0.000000e+00 782.0
39 TraesCS4D01G056000 chr5D 84.167 720 76 30 3263 3962 299320857 299320156 0.000000e+00 664.0
40 TraesCS4D01G056000 chr5D 91.667 120 8 2 3956 4074 261029005 261028887 9.060000e-37 165.0
41 TraesCS4D01G056000 chr5D 91.525 118 9 1 3958 4074 256970499 256970382 1.170000e-35 161.0
42 TraesCS4D01G056000 chr5D 96.970 33 1 0 2738 2770 432529949 432529981 5.690000e-04 56.5
43 TraesCS4D01G056000 chrUn 86.713 715 69 16 3269 3960 56964742 56964031 0.000000e+00 771.0
44 TraesCS4D01G056000 chrUn 81.159 690 117 9 1 678 309560325 309561013 3.580000e-150 542.0
45 TraesCS4D01G056000 chrUn 80.870 690 119 9 1 678 309576397 309577085 7.750000e-147 531.0
46 TraesCS4D01G056000 chrUn 93.694 111 7 0 3964 4074 98070620 98070730 2.520000e-37 167.0
47 TraesCS4D01G056000 chrUn 92.174 115 9 0 3960 4074 109604668 109604554 3.260000e-36 163.0
48 TraesCS4D01G056000 chr5A 86.969 683 72 16 3263 3933 102605210 102605887 0.000000e+00 752.0
49 TraesCS4D01G056000 chr2B 91.803 488 36 2 1 485 794115382 794115868 0.000000e+00 676.0
50 TraesCS4D01G056000 chr2A 92.934 467 29 3 1 463 11826009 11825543 0.000000e+00 676.0
51 TraesCS4D01G056000 chr2A 82.059 641 96 19 1 628 203535609 203534975 2.790000e-146 529.0
52 TraesCS4D01G056000 chr2A 81.771 192 32 3 2328 2516 144023417 144023226 1.520000e-34 158.0
53 TraesCS4D01G056000 chr1A 83.754 714 90 22 3263 3962 375201933 375202634 0.000000e+00 652.0
54 TraesCS4D01G056000 chr1A 86.458 192 22 3 2328 2515 368829464 368829273 1.480000e-49 207.0
55 TraesCS4D01G056000 chr3A 82.622 633 94 13 1 621 691335448 691336076 2.770000e-151 545.0
56 TraesCS4D01G056000 chr3B 82.278 632 96 14 1 621 250141737 250141111 2.160000e-147 532.0
57 TraesCS4D01G056000 chr7D 80.687 233 35 7 2347 2575 220513130 220513356 5.410000e-39 172.0
58 TraesCS4D01G056000 chr6B 75.439 342 80 4 332 671 101543498 101543159 3.260000e-36 163.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G056000 chr4D 31333987 31338060 4073 True 7524.000000 7524 100.000000 1 4074 1 chr4D.!!$R1 4073
1 TraesCS4D01G056000 chr4D 307225855 307226531 676 True 900.000000 900 90.634000 3271 3958 1 chr4D.!!$R2 687
2 TraesCS4D01G056000 chr4B 45192537 45194886 2349 False 837.666667 1727 87.872333 700 3164 3 chr4B.!!$F2 2464
3 TraesCS4D01G056000 chr7B 529156169 529156852 683 True 1011.000000 1011 93.421000 1 681 1 chr7B.!!$R1 680
4 TraesCS4D01G056000 chr3D 302963199 302963910 711 False 1011.000000 1011 92.707000 3269 3962 1 chr3D.!!$F1 693
5 TraesCS4D01G056000 chr4A 571045659 571048040 2381 True 684.750000 994 88.959500 798 3269 4 chr4A.!!$R1 2471
6 TraesCS4D01G056000 chr1D 139044624 139045337 713 True 994.000000 994 92.190000 3267 3964 1 chr1D.!!$R1 697
7 TraesCS4D01G056000 chr1D 352183581 352184303 722 False 891.000000 891 89.379000 3259 3961 1 chr1D.!!$F4 702
8 TraesCS4D01G056000 chr1D 252534275 252534987 712 False 857.000000 857 88.951000 3272 3960 1 chr1D.!!$F3 688
9 TraesCS4D01G056000 chr1D 188094428 188095134 706 False 832.000000 832 88.277000 3271 3962 1 chr1D.!!$F2 691
10 TraesCS4D01G056000 chr1D 133733019 133733716 697 False 795.000000 795 87.500000 3272 3962 1 chr1D.!!$F1 690
11 TraesCS4D01G056000 chr2D 483128953 483129660 707 True 992.000000 992 92.384000 3272 3961 1 chr2D.!!$R3 689
12 TraesCS4D01G056000 chr2D 194008773 194009482 709 True 990.000000 990 92.264000 3271 3962 1 chr2D.!!$R2 691
13 TraesCS4D01G056000 chr2D 108773739 108774462 723 False 739.000000 739 86.027000 3272 3960 1 chr2D.!!$F1 688
14 TraesCS4D01G056000 chr6D 400423632 400424342 710 False 889.000000 889 89.747000 3272 3960 1 chr6D.!!$F2 688
15 TraesCS4D01G056000 chr5B 17562371 17562995 624 True 874.000000 874 92.000000 1 622 1 chr5B.!!$R1 621
16 TraesCS4D01G056000 chr6A 430693824 430694530 706 False 846.000000 846 88.701000 3272 3960 1 chr6A.!!$F2 688
17 TraesCS4D01G056000 chr7A 296756845 296757549 704 True 813.000000 813 87.819000 3272 3962 1 chr7A.!!$R1 690
18 TraesCS4D01G056000 chr5D 369879013 369879715 702 True 782.000000 782 87.201000 3271 3960 1 chr5D.!!$R4 689
19 TraesCS4D01G056000 chr5D 299320156 299320857 701 True 664.000000 664 84.167000 3263 3962 1 chr5D.!!$R3 699
20 TraesCS4D01G056000 chrUn 56964031 56964742 711 True 771.000000 771 86.713000 3269 3960 1 chrUn.!!$R1 691
21 TraesCS4D01G056000 chrUn 309560325 309561013 688 False 542.000000 542 81.159000 1 678 1 chrUn.!!$F2 677
22 TraesCS4D01G056000 chrUn 309576397 309577085 688 False 531.000000 531 80.870000 1 678 1 chrUn.!!$F3 677
23 TraesCS4D01G056000 chr5A 102605210 102605887 677 False 752.000000 752 86.969000 3263 3933 1 chr5A.!!$F1 670
24 TraesCS4D01G056000 chr2A 203534975 203535609 634 True 529.000000 529 82.059000 1 628 1 chr2A.!!$R3 627
25 TraesCS4D01G056000 chr1A 375201933 375202634 701 False 652.000000 652 83.754000 3263 3962 1 chr1A.!!$F1 699
26 TraesCS4D01G056000 chr3A 691335448 691336076 628 False 545.000000 545 82.622000 1 621 1 chr3A.!!$F1 620
27 TraesCS4D01G056000 chr3B 250141111 250141737 626 True 532.000000 532 82.278000 1 621 1 chr3B.!!$R1 620

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
356 366 0.532417 GCGAGACGAGCTAGGTCCTA 60.532 60.0 16.06 0.0 34.97 2.94 F
1220 1261 0.108992 TACGAGTTCACGGTCATGGC 60.109 55.0 0.00 0.0 37.61 4.40 F
2110 2193 0.181824 AACACACCGCACCCTTAACT 59.818 50.0 0.00 0.0 0.00 2.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2201 2285 0.108662 CTGCTGATGGCTGTCGTACA 60.109 55.0 0.00 0.00 42.39 2.90 R
2548 2637 0.037605 CCCTCTTAACCAGCGAACGT 60.038 55.0 0.00 0.00 0.00 3.99 R
3183 3324 0.249398 CACCCTAACCGAGGTCTTGG 59.751 60.0 2.77 2.77 45.03 3.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 33 1.261480 AGACAATGAGAGCCGTGACT 58.739 50.000 0.00 0.00 0.00 3.41
181 183 4.514585 ACCGGGCAACACCAAGCA 62.515 61.111 6.32 0.00 42.05 3.91
292 297 1.978580 ACCCCAACTGAAGAGACGATT 59.021 47.619 0.00 0.00 0.00 3.34
356 366 0.532417 GCGAGACGAGCTAGGTCCTA 60.532 60.000 16.06 0.00 34.97 2.94
448 459 2.980475 GAGCTCAGTCCTGCTGCT 59.020 61.111 9.40 12.18 44.66 4.24
510 521 2.658422 TGATGAGCTGCAGCACGA 59.342 55.556 38.24 22.38 45.16 4.35
736 750 9.219603 CATGTCTACAAATCTTACTTTTCCTGA 57.780 33.333 0.00 0.00 0.00 3.86
753 767 6.462073 TTCCTGAACGAACTTTTATCGAAG 57.538 37.500 2.65 0.00 42.76 3.79
776 790 4.011517 GCGAAGGTTCCGGGTGGA 62.012 66.667 0.00 0.00 44.61 4.02
787 803 4.767255 GGGTGGAGTCTGGCGCTG 62.767 72.222 7.64 0.11 0.00 5.18
851 867 2.700897 ACCAGCTTTAGCGATGGTCTAT 59.299 45.455 9.22 0.00 43.45 1.98
859 875 8.758633 GCTTTAGCGATGGTCTATTCTTAATA 57.241 34.615 0.00 0.00 0.00 0.98
1043 1078 3.322541 TCCTCATCGTTCAAGGTACACAA 59.677 43.478 0.00 0.00 0.00 3.33
1063 1098 6.757897 ACAAATCTCTTGTGACTTGTCAAA 57.242 33.333 4.93 0.00 0.00 2.69
1153 1194 6.290605 TCATGCGATTCCTTGAAGATCATAA 58.709 36.000 0.00 0.00 0.00 1.90
1156 1197 6.290605 TGCGATTCCTTGAAGATCATAATCA 58.709 36.000 0.00 0.00 34.07 2.57
1220 1261 0.108992 TACGAGTTCACGGTCATGGC 60.109 55.000 0.00 0.00 37.61 4.40
1245 1287 1.073199 CCCTCCGCTCACCAAGTTT 59.927 57.895 0.00 0.00 0.00 2.66
1262 1304 4.744795 AGTTTCCGTATTCTGCTGAGAT 57.255 40.909 0.00 0.00 0.00 2.75
1268 1310 8.512956 GTTTCCGTATTCTGCTGAGATAGTATA 58.487 37.037 0.00 0.00 0.00 1.47
1305 1347 3.012518 ACATACTTGCTGATGAAGTGGC 58.987 45.455 0.00 0.00 35.30 5.01
1313 1355 2.360165 GCTGATGAAGTGGCTATTTGGG 59.640 50.000 0.00 0.00 0.00 4.12
1314 1356 2.360165 CTGATGAAGTGGCTATTTGGGC 59.640 50.000 0.00 0.00 0.00 5.36
1396 1438 3.267974 GTCAAAGCCTTGGCCGAG 58.732 61.111 13.75 13.75 30.44 4.63
1411 1453 1.373435 CGAGGCCAAGGTACCAACA 59.627 57.895 15.94 0.00 0.00 3.33
1478 1521 7.936847 ACTTTGACACTTTGTGATACAATCCTA 59.063 33.333 4.61 0.00 38.00 2.94
1614 1676 4.898829 TGGACATCAATTAAGATTGGCG 57.101 40.909 0.00 0.00 42.36 5.69
1751 1826 3.877508 GGAATTCATCAAGGGTAACGAGG 59.122 47.826 7.93 0.00 37.60 4.63
1759 1834 2.474410 AGGGTAACGAGGCTTTTGAG 57.526 50.000 0.00 0.00 37.60 3.02
1761 1836 2.105993 AGGGTAACGAGGCTTTTGAGTT 59.894 45.455 0.00 0.00 37.60 3.01
1763 1838 3.317149 GGGTAACGAGGCTTTTGAGTTTT 59.683 43.478 0.00 0.00 37.60 2.43
1765 1840 4.035909 GGTAACGAGGCTTTTGAGTTTTGA 59.964 41.667 0.00 0.00 0.00 2.69
1766 1841 4.918810 AACGAGGCTTTTGAGTTTTGAT 57.081 36.364 0.00 0.00 0.00 2.57
1767 1842 4.489679 ACGAGGCTTTTGAGTTTTGATC 57.510 40.909 0.00 0.00 0.00 2.92
1768 1843 3.882888 ACGAGGCTTTTGAGTTTTGATCA 59.117 39.130 0.00 0.00 0.00 2.92
1769 1844 4.222114 CGAGGCTTTTGAGTTTTGATCAC 58.778 43.478 0.00 0.00 0.00 3.06
1782 1857 2.455674 TGATCACCTTCTTGTGGACG 57.544 50.000 0.00 0.00 36.87 4.79
1784 1859 0.670546 ATCACCTTCTTGTGGACGCG 60.671 55.000 3.53 3.53 36.87 6.01
1786 1861 3.777925 CCTTCTTGTGGACGCGCG 61.778 66.667 30.96 30.96 0.00 6.86
1787 1862 4.430423 CTTCTTGTGGACGCGCGC 62.430 66.667 32.58 23.91 0.00 6.86
1879 1954 3.073678 TGATGTAGCGTTTGCAGTGAAT 58.926 40.909 0.00 0.00 46.23 2.57
1883 1958 6.536941 TGATGTAGCGTTTGCAGTGAATTATA 59.463 34.615 0.00 0.00 46.23 0.98
1885 1960 6.943981 TGTAGCGTTTGCAGTGAATTATATC 58.056 36.000 0.00 0.00 46.23 1.63
1888 1963 5.237344 AGCGTTTGCAGTGAATTATATCCTC 59.763 40.000 0.00 0.00 46.23 3.71
1973 2048 7.817418 TTTCCAACTGAACTTGCTAATACTT 57.183 32.000 0.00 0.00 31.05 2.24
1975 2050 5.938125 TCCAACTGAACTTGCTAATACTTCC 59.062 40.000 0.00 0.00 0.00 3.46
1978 2053 5.491982 ACTGAACTTGCTAATACTTCCCTG 58.508 41.667 0.00 0.00 0.00 4.45
1979 2054 4.843728 TGAACTTGCTAATACTTCCCTGG 58.156 43.478 0.00 0.00 0.00 4.45
1980 2055 4.534500 TGAACTTGCTAATACTTCCCTGGA 59.466 41.667 0.00 0.00 0.00 3.86
1981 2056 5.013704 TGAACTTGCTAATACTTCCCTGGAA 59.986 40.000 0.00 0.00 0.00 3.53
1983 2058 6.079712 ACTTGCTAATACTTCCCTGGAATT 57.920 37.500 0.00 0.00 33.28 2.17
2017 2097 6.484364 ACTCACCATGATTTTGGACTTTTT 57.516 33.333 0.00 0.00 39.25 1.94
2063 2143 3.119137 CCACATACCAGACGAGTTCATCA 60.119 47.826 0.00 0.00 0.00 3.07
2088 2170 7.654022 AAAAAGTTGTAAGTTCAATCCCTGA 57.346 32.000 0.00 0.00 0.00 3.86
2102 2184 2.542907 CCTGACCAACACACCGCAC 61.543 63.158 0.00 0.00 0.00 5.34
2109 2192 0.309612 CAACACACCGCACCCTTAAC 59.690 55.000 0.00 0.00 0.00 2.01
2110 2193 0.181824 AACACACCGCACCCTTAACT 59.818 50.000 0.00 0.00 0.00 2.24
2111 2194 0.181824 ACACACCGCACCCTTAACTT 59.818 50.000 0.00 0.00 0.00 2.66
2113 2196 2.039348 ACACACCGCACCCTTAACTTAT 59.961 45.455 0.00 0.00 0.00 1.73
2142 2226 3.306703 CGCAAATAACATCAACCATTGGC 59.693 43.478 1.54 0.00 0.00 4.52
2145 2229 0.814457 TAACATCAACCATTGGCCGC 59.186 50.000 1.54 0.00 0.00 6.53
2147 2231 0.899717 ACATCAACCATTGGCCGCTT 60.900 50.000 1.54 0.00 0.00 4.68
2148 2232 0.247185 CATCAACCATTGGCCGCTTT 59.753 50.000 1.54 0.00 0.00 3.51
2149 2233 1.476085 CATCAACCATTGGCCGCTTTA 59.524 47.619 1.54 0.00 0.00 1.85
2150 2234 1.173043 TCAACCATTGGCCGCTTTAG 58.827 50.000 1.54 0.00 0.00 1.85
2151 2235 0.887933 CAACCATTGGCCGCTTTAGT 59.112 50.000 1.54 0.00 0.00 2.24
2154 2238 3.849563 ACCATTGGCCGCTTTAGTATA 57.150 42.857 1.54 0.00 0.00 1.47
2155 2239 4.159244 ACCATTGGCCGCTTTAGTATAA 57.841 40.909 1.54 0.00 0.00 0.98
2156 2240 4.134563 ACCATTGGCCGCTTTAGTATAAG 58.865 43.478 1.54 0.00 0.00 1.73
2157 2241 4.141574 ACCATTGGCCGCTTTAGTATAAGA 60.142 41.667 1.54 0.00 0.00 2.10
2158 2242 4.819630 CCATTGGCCGCTTTAGTATAAGAA 59.180 41.667 0.00 0.00 0.00 2.52
2160 2244 6.430451 CATTGGCCGCTTTAGTATAAGAAAG 58.570 40.000 0.00 4.07 36.04 2.62
2161 2245 5.347620 TGGCCGCTTTAGTATAAGAAAGA 57.652 39.130 0.00 0.00 35.12 2.52
2162 2246 5.736813 TGGCCGCTTTAGTATAAGAAAGAA 58.263 37.500 0.00 0.00 35.12 2.52
2163 2247 5.815740 TGGCCGCTTTAGTATAAGAAAGAAG 59.184 40.000 0.00 4.98 35.12 2.85
2164 2248 6.047231 GGCCGCTTTAGTATAAGAAAGAAGA 58.953 40.000 10.44 0.00 35.12 2.87
2165 2249 6.201234 GGCCGCTTTAGTATAAGAAAGAAGAG 59.799 42.308 10.44 0.00 35.12 2.85
2166 2250 6.979238 GCCGCTTTAGTATAAGAAAGAAGAGA 59.021 38.462 10.44 0.00 35.12 3.10
2167 2251 7.043258 GCCGCTTTAGTATAAGAAAGAAGAGAC 60.043 40.741 10.44 0.00 35.12 3.36
2168 2252 7.435784 CCGCTTTAGTATAAGAAAGAAGAGACC 59.564 40.741 10.44 0.00 35.12 3.85
2169 2253 8.192110 CGCTTTAGTATAAGAAAGAAGAGACCT 58.808 37.037 10.44 0.00 35.12 3.85
2170 2254 9.308318 GCTTTAGTATAAGAAAGAAGAGACCTG 57.692 37.037 10.44 0.00 35.12 4.00
2171 2255 9.308318 CTTTAGTATAAGAAAGAAGAGACCTGC 57.692 37.037 2.70 0.00 35.12 4.85
2172 2256 8.596781 TTAGTATAAGAAAGAAGAGACCTGCT 57.403 34.615 0.00 0.00 0.00 4.24
2173 2257 9.696572 TTAGTATAAGAAAGAAGAGACCTGCTA 57.303 33.333 0.00 0.00 0.00 3.49
2174 2258 8.002984 AGTATAAGAAAGAAGAGACCTGCTAC 57.997 38.462 0.00 0.00 0.00 3.58
2175 2259 6.859112 ATAAGAAAGAAGAGACCTGCTACA 57.141 37.500 0.00 0.00 0.00 2.74
2176 2260 4.529109 AGAAAGAAGAGACCTGCTACAC 57.471 45.455 0.00 0.00 0.00 2.90
2177 2261 3.057174 AGAAAGAAGAGACCTGCTACACG 60.057 47.826 0.00 0.00 0.00 4.49
2178 2262 1.912417 AGAAGAGACCTGCTACACGT 58.088 50.000 0.00 0.00 0.00 4.49
2179 2263 3.069079 AGAAGAGACCTGCTACACGTA 57.931 47.619 0.00 0.00 0.00 3.57
2180 2264 2.748532 AGAAGAGACCTGCTACACGTAC 59.251 50.000 0.00 0.00 0.00 3.67
2181 2265 1.085091 AGAGACCTGCTACACGTACG 58.915 55.000 15.01 15.01 0.00 3.67
2182 2266 1.081892 GAGACCTGCTACACGTACGA 58.918 55.000 24.41 0.00 0.00 3.43
2183 2267 0.801251 AGACCTGCTACACGTACGAC 59.199 55.000 24.41 6.19 0.00 4.34
2184 2268 0.518636 GACCTGCTACACGTACGACA 59.481 55.000 24.41 10.44 0.00 4.35
2185 2269 0.953727 ACCTGCTACACGTACGACAA 59.046 50.000 24.41 5.15 0.00 3.18
2186 2270 1.334054 CCTGCTACACGTACGACAAC 58.666 55.000 24.41 7.64 0.00 3.32
2187 2271 1.334054 CTGCTACACGTACGACAACC 58.666 55.000 24.41 7.60 0.00 3.77
2188 2272 0.953727 TGCTACACGTACGACAACCT 59.046 50.000 24.41 0.00 0.00 3.50
2189 2273 1.337703 TGCTACACGTACGACAACCTT 59.662 47.619 24.41 0.00 0.00 3.50
2190 2274 2.223782 TGCTACACGTACGACAACCTTT 60.224 45.455 24.41 0.00 0.00 3.11
2191 2275 2.154389 GCTACACGTACGACAACCTTTG 59.846 50.000 24.41 9.52 0.00 2.77
2193 2277 3.435105 ACACGTACGACAACCTTTGTA 57.565 42.857 24.41 0.00 45.52 2.41
2194 2278 3.981211 ACACGTACGACAACCTTTGTAT 58.019 40.909 24.41 0.00 45.52 2.29
2195 2279 3.737266 ACACGTACGACAACCTTTGTATG 59.263 43.478 24.41 7.20 45.52 2.39
2196 2280 3.982701 CACGTACGACAACCTTTGTATGA 59.017 43.478 24.41 0.00 45.52 2.15
2197 2281 4.624024 CACGTACGACAACCTTTGTATGAT 59.376 41.667 24.41 0.00 45.52 2.45
2198 2282 5.119588 CACGTACGACAACCTTTGTATGATT 59.880 40.000 24.41 0.00 45.52 2.57
2199 2283 5.697633 ACGTACGACAACCTTTGTATGATTT 59.302 36.000 24.41 0.00 45.52 2.17
2200 2284 6.203338 ACGTACGACAACCTTTGTATGATTTT 59.797 34.615 24.41 0.00 45.52 1.82
2201 2285 7.073265 CGTACGACAACCTTTGTATGATTTTT 58.927 34.615 10.44 0.00 45.52 1.94
2202 2286 7.059033 CGTACGACAACCTTTGTATGATTTTTG 59.941 37.037 10.44 0.00 45.52 2.44
2203 2287 6.801575 ACGACAACCTTTGTATGATTTTTGT 58.198 32.000 0.00 0.00 45.52 2.83
2204 2288 7.932335 ACGACAACCTTTGTATGATTTTTGTA 58.068 30.769 0.00 0.00 45.52 2.41
2205 2289 7.858879 ACGACAACCTTTGTATGATTTTTGTAC 59.141 33.333 0.00 0.00 45.52 2.90
2206 2290 7.059033 CGACAACCTTTGTATGATTTTTGTACG 59.941 37.037 0.00 0.00 45.52 3.67
2207 2291 7.932335 ACAACCTTTGTATGATTTTTGTACGA 58.068 30.769 0.00 0.00 43.27 3.43
2208 2292 7.858879 ACAACCTTTGTATGATTTTTGTACGAC 59.141 33.333 0.00 0.00 43.27 4.34
2209 2293 7.499321 ACCTTTGTATGATTTTTGTACGACA 57.501 32.000 0.00 0.00 0.00 4.35
2210 2294 7.581476 ACCTTTGTATGATTTTTGTACGACAG 58.419 34.615 0.00 0.00 0.00 3.51
2211 2295 6.523201 CCTTTGTATGATTTTTGTACGACAGC 59.477 38.462 0.00 0.00 0.00 4.40
2212 2296 5.539582 TGTATGATTTTTGTACGACAGCC 57.460 39.130 0.00 0.00 0.00 4.85
2213 2297 4.998033 TGTATGATTTTTGTACGACAGCCA 59.002 37.500 0.00 0.00 0.00 4.75
2214 2298 5.645929 TGTATGATTTTTGTACGACAGCCAT 59.354 36.000 0.00 0.00 0.00 4.40
2215 2299 4.678509 TGATTTTTGTACGACAGCCATC 57.321 40.909 0.00 0.00 0.00 3.51
2216 2300 4.068599 TGATTTTTGTACGACAGCCATCA 58.931 39.130 0.00 0.00 0.00 3.07
2217 2301 4.154015 TGATTTTTGTACGACAGCCATCAG 59.846 41.667 0.00 0.00 0.00 2.90
2218 2302 1.438651 TTTGTACGACAGCCATCAGC 58.561 50.000 0.00 0.00 44.25 4.26
2227 2311 2.747460 GCCATCAGCAGCCGTTGA 60.747 61.111 0.00 0.00 42.97 3.18
2228 2312 2.117156 GCCATCAGCAGCCGTTGAT 61.117 57.895 0.00 0.00 43.15 2.57
2229 2313 1.660560 GCCATCAGCAGCCGTTGATT 61.661 55.000 0.00 0.00 40.72 2.57
2230 2314 1.667236 CCATCAGCAGCCGTTGATTA 58.333 50.000 0.00 0.00 40.72 1.75
2231 2315 2.016318 CCATCAGCAGCCGTTGATTAA 58.984 47.619 0.00 0.00 40.72 1.40
2232 2316 2.423185 CCATCAGCAGCCGTTGATTAAA 59.577 45.455 0.00 0.00 40.72 1.52
2233 2317 3.067180 CCATCAGCAGCCGTTGATTAAAT 59.933 43.478 0.00 0.00 40.72 1.40
2234 2318 4.440525 CCATCAGCAGCCGTTGATTAAATT 60.441 41.667 0.00 0.00 40.72 1.82
2235 2319 4.355543 TCAGCAGCCGTTGATTAAATTC 57.644 40.909 0.00 0.00 0.00 2.17
2236 2320 3.128589 TCAGCAGCCGTTGATTAAATTCC 59.871 43.478 0.00 0.00 0.00 3.01
2237 2321 3.088532 AGCAGCCGTTGATTAAATTCCA 58.911 40.909 0.00 0.00 0.00 3.53
2238 2322 3.119495 AGCAGCCGTTGATTAAATTCCAC 60.119 43.478 0.00 0.00 0.00 4.02
2239 2323 3.366883 GCAGCCGTTGATTAAATTCCACA 60.367 43.478 0.00 0.00 0.00 4.17
2240 2324 4.677779 GCAGCCGTTGATTAAATTCCACAT 60.678 41.667 0.00 0.00 0.00 3.21
2241 2325 5.449862 GCAGCCGTTGATTAAATTCCACATA 60.450 40.000 0.00 0.00 0.00 2.29
2242 2326 5.971202 CAGCCGTTGATTAAATTCCACATAC 59.029 40.000 0.00 0.00 0.00 2.39
2243 2327 4.967575 GCCGTTGATTAAATTCCACATACG 59.032 41.667 0.00 0.00 0.00 3.06
2244 2328 5.220700 GCCGTTGATTAAATTCCACATACGA 60.221 40.000 0.00 0.00 0.00 3.43
2245 2329 6.418956 CCGTTGATTAAATTCCACATACGAG 58.581 40.000 0.00 0.00 0.00 4.18
2246 2330 6.036735 CCGTTGATTAAATTCCACATACGAGT 59.963 38.462 0.00 0.00 0.00 4.18
2247 2331 6.899771 CGTTGATTAAATTCCACATACGAGTG 59.100 38.462 0.00 0.00 39.21 3.51
2248 2332 7.201487 CGTTGATTAAATTCCACATACGAGTGA 60.201 37.037 8.54 0.00 42.05 3.41
2249 2333 7.770801 TGATTAAATTCCACATACGAGTGAG 57.229 36.000 8.54 0.00 42.05 3.51
2250 2334 7.552459 TGATTAAATTCCACATACGAGTGAGA 58.448 34.615 8.54 3.05 42.05 3.27
2251 2335 8.204160 TGATTAAATTCCACATACGAGTGAGAT 58.796 33.333 8.54 1.30 42.05 2.75
2252 2336 8.594881 ATTAAATTCCACATACGAGTGAGATC 57.405 34.615 8.54 0.00 42.05 2.75
2253 2337 5.598416 AATTCCACATACGAGTGAGATCA 57.402 39.130 8.54 0.00 42.05 2.92
2254 2338 4.371855 TTCCACATACGAGTGAGATCAC 57.628 45.455 4.77 4.77 46.77 3.06
2268 2352 6.512177 GTGAGATCACGTGGTACATAAATC 57.488 41.667 17.00 8.53 37.72 2.17
2269 2353 5.173312 GTGAGATCACGTGGTACATAAATCG 59.827 44.000 17.00 0.00 37.72 3.34
2270 2354 5.163591 TGAGATCACGTGGTACATAAATCGT 60.164 40.000 17.00 0.00 44.52 3.73
2271 2355 6.038492 TGAGATCACGTGGTACATAAATCGTA 59.962 38.462 17.00 0.95 44.52 3.43
2272 2356 6.204359 AGATCACGTGGTACATAAATCGTAC 58.796 40.000 17.00 0.00 44.52 3.67
2273 2357 4.341935 TCACGTGGTACATAAATCGTACG 58.658 43.478 17.00 9.53 44.52 3.67
2274 2358 3.061666 CACGTGGTACATAAATCGTACGC 60.062 47.826 11.24 0.00 44.52 4.42
2275 2359 3.107407 CGTGGTACATAAATCGTACGCA 58.893 45.455 11.24 0.00 44.52 5.24
2276 2360 3.179010 CGTGGTACATAAATCGTACGCAG 59.821 47.826 11.24 0.00 44.52 5.18
2277 2361 4.107622 GTGGTACATAAATCGTACGCAGT 58.892 43.478 11.24 5.01 44.52 4.40
2278 2362 4.563976 GTGGTACATAAATCGTACGCAGTT 59.436 41.667 11.24 7.91 38.57 3.16
2279 2363 5.062558 GTGGTACATAAATCGTACGCAGTTT 59.937 40.000 11.24 13.27 38.57 2.66
2280 2364 5.638657 TGGTACATAAATCGTACGCAGTTTT 59.361 36.000 11.24 9.93 37.78 2.43
2281 2365 6.180567 GGTACATAAATCGTACGCAGTTTTC 58.819 40.000 11.24 0.00 37.78 2.29
2282 2366 5.849357 ACATAAATCGTACGCAGTTTTCA 57.151 34.783 11.24 0.00 37.78 2.69
2283 2367 6.417191 ACATAAATCGTACGCAGTTTTCAT 57.583 33.333 11.24 1.08 37.78 2.57
2284 2368 6.475207 ACATAAATCGTACGCAGTTTTCATC 58.525 36.000 11.24 0.00 37.78 2.92
2285 2369 3.634730 AATCGTACGCAGTTTTCATCG 57.365 42.857 11.24 0.00 37.78 3.84
2286 2370 2.054687 TCGTACGCAGTTTTCATCGT 57.945 45.000 11.24 0.00 37.78 3.73
2287 2371 3.200294 TCGTACGCAGTTTTCATCGTA 57.800 42.857 11.24 0.00 37.78 3.43
2288 2372 3.761657 TCGTACGCAGTTTTCATCGTAT 58.238 40.909 11.24 0.00 37.78 3.06
2289 2373 3.544682 TCGTACGCAGTTTTCATCGTATG 59.455 43.478 11.24 6.54 37.78 2.39
2290 2374 2.806288 ACGCAGTTTTCATCGTATGC 57.194 45.000 0.00 0.00 37.78 3.14
2291 2375 2.073056 ACGCAGTTTTCATCGTATGCA 58.927 42.857 0.00 0.00 37.78 3.96
2292 2376 2.094258 ACGCAGTTTTCATCGTATGCAG 59.906 45.455 0.00 0.00 37.78 4.41
2293 2377 2.348362 CGCAGTTTTCATCGTATGCAGA 59.652 45.455 0.00 0.00 33.33 4.26
2294 2378 3.542875 CGCAGTTTTCATCGTATGCAGAG 60.543 47.826 0.00 0.00 33.33 3.35
2295 2379 3.786818 GCAGTTTTCATCGTATGCAGAGC 60.787 47.826 0.00 0.00 33.92 4.09
2296 2380 3.371898 CAGTTTTCATCGTATGCAGAGCA 59.628 43.478 0.00 0.00 44.86 4.26
2297 2381 4.002982 AGTTTTCATCGTATGCAGAGCAA 58.997 39.130 0.00 0.00 43.62 3.91
2298 2382 4.637534 AGTTTTCATCGTATGCAGAGCAAT 59.362 37.500 0.00 0.00 43.62 3.56
2299 2383 5.124457 AGTTTTCATCGTATGCAGAGCAATT 59.876 36.000 0.00 0.00 43.62 2.32
2300 2384 5.565592 TTTCATCGTATGCAGAGCAATTT 57.434 34.783 0.00 0.00 43.62 1.82
2301 2385 4.801147 TCATCGTATGCAGAGCAATTTC 57.199 40.909 0.00 0.00 43.62 2.17
2302 2386 3.245990 TCATCGTATGCAGAGCAATTTCG 59.754 43.478 0.00 0.00 43.62 3.46
2305 2389 3.306973 TCGTATGCAGAGCAATTTCGAAG 59.693 43.478 0.00 0.00 43.62 3.79
2318 2405 9.214953 GAGCAATTTCGAAGAAATAACACTATG 57.785 33.333 8.23 3.47 45.90 2.23
2319 2406 7.698130 AGCAATTTCGAAGAAATAACACTATGC 59.302 33.333 8.23 11.42 45.90 3.14
2358 2445 1.066143 CAGCCTACGTTCATTGGGAGT 60.066 52.381 0.00 0.00 0.00 3.85
2373 2460 2.307392 TGGGAGTGGATGGAAAATCGAA 59.693 45.455 0.00 0.00 0.00 3.71
2375 2462 3.343617 GGAGTGGATGGAAAATCGAACA 58.656 45.455 0.00 0.00 0.00 3.18
2382 2470 8.531146 AGTGGATGGAAAATCGAACATTTTATT 58.469 29.630 0.00 0.00 32.03 1.40
2428 2516 2.230992 ACAACTTCAGTTTGCAAGCACA 59.769 40.909 16.04 0.00 35.83 4.57
2437 2526 2.736197 TGCAAGCACAGCAAATCCT 58.264 47.368 0.00 0.00 39.39 3.24
2439 2528 0.389426 GCAAGCACAGCAAATCCTGG 60.389 55.000 0.00 0.00 37.16 4.45
2440 2529 0.389426 CAAGCACAGCAAATCCTGGC 60.389 55.000 0.00 0.00 37.16 4.85
2441 2530 0.828762 AAGCACAGCAAATCCTGGCA 60.829 50.000 0.00 0.00 37.16 4.92
2526 2615 9.607988 ACATAAATTGTCATGCAAATCATTCAT 57.392 25.926 6.65 0.00 40.91 2.57
2563 2652 0.438830 GCTGACGTTCGCTGGTTAAG 59.561 55.000 0.00 0.00 0.00 1.85
2578 2667 5.489249 CTGGTTAAGAGGGTCCTAAAAGTC 58.511 45.833 0.00 0.00 0.00 3.01
2588 2677 2.095718 GTCCTAAAAGTCAAGCCAAGCG 60.096 50.000 0.00 0.00 0.00 4.68
2634 2723 1.603678 GGCAGCAATGTGGACAGTTTG 60.604 52.381 0.00 0.00 0.00 2.93
2651 2740 7.396540 ACAGTTTGTTTTCTCTCAAATCAGT 57.603 32.000 0.00 0.00 36.25 3.41
2741 2831 9.912634 TTTCTCTAAAATATGCAACTTCTTTGG 57.087 29.630 0.00 0.00 35.51 3.28
2878 2978 4.082190 CCGTTCATCAAGGAACTAGTGAGA 60.082 45.833 0.00 0.00 43.87 3.27
2904 3004 4.772886 TCTTCCAAATAGCCCCTACTTC 57.227 45.455 0.00 0.00 0.00 3.01
2909 3009 5.837829 TCCAAATAGCCCCTACTTCAAAAT 58.162 37.500 0.00 0.00 0.00 1.82
2910 3010 5.656416 TCCAAATAGCCCCTACTTCAAAATG 59.344 40.000 0.00 0.00 0.00 2.32
2911 3011 5.422012 CCAAATAGCCCCTACTTCAAAATGT 59.578 40.000 0.00 0.00 0.00 2.71
2912 3012 6.405842 CCAAATAGCCCCTACTTCAAAATGTC 60.406 42.308 0.00 0.00 0.00 3.06
2915 3015 2.678336 GCCCCTACTTCAAAATGTCGAG 59.322 50.000 0.00 0.00 0.00 4.04
2916 3016 3.618997 GCCCCTACTTCAAAATGTCGAGA 60.619 47.826 0.00 0.00 0.00 4.04
2917 3017 4.770795 CCCCTACTTCAAAATGTCGAGAT 58.229 43.478 0.00 0.00 0.00 2.75
2920 3022 5.419542 CCTACTTCAAAATGTCGAGATGGA 58.580 41.667 0.00 0.00 0.00 3.41
2949 3053 4.696479 ATCCACTTCACTGTTCTGACTT 57.304 40.909 0.00 0.00 0.00 3.01
3016 3120 0.745468 ATAGCGTTCGAGGACTTCCC 59.255 55.000 0.00 0.00 36.42 3.97
3018 3122 1.005394 GCGTTCGAGGACTTCCCAA 60.005 57.895 0.00 0.00 37.41 4.12
3085 3226 9.784531 ACTGTTGAAATGTAGGATATAAGATGG 57.215 33.333 0.00 0.00 0.00 3.51
3091 3232 9.877178 GAAATGTAGGATATAAGATGGGTACAG 57.123 37.037 0.00 0.00 0.00 2.74
3092 3233 9.615660 AAATGTAGGATATAAGATGGGTACAGA 57.384 33.333 0.00 0.00 0.00 3.41
3188 3329 5.336690 GCAATTGCTTGATAAAGGACCAAGA 60.337 40.000 23.21 0.00 39.55 3.02
3191 3332 3.330701 TGCTTGATAAAGGACCAAGACCT 59.669 43.478 0.00 0.00 39.55 3.85
3321 3464 8.760980 TTTTTCCTTGAAGAGAAAAGGTGATA 57.239 30.769 15.79 4.41 41.55 2.15
3502 3659 9.599866 AGTGAGATCTGATAGAGATAGATAACG 57.400 37.037 0.00 0.00 41.91 3.18
3588 3789 7.903431 CGGAAACTAAAATTGTAGATCGGAAAG 59.097 37.037 9.75 0.00 0.00 2.62
3642 3847 4.164204 AGGTTTCACTAGAGGCTTCTCTT 58.836 43.478 0.00 0.00 44.95 2.85
3714 3935 7.099764 AGTTATGACGATATCTAAGGCAATGG 58.900 38.462 0.34 0.00 0.00 3.16
3948 4177 0.248289 ATACGTGTCGGTTCCCCTTG 59.752 55.000 0.00 0.00 0.00 3.61
3964 4193 2.291153 CCCTTGTGTCACTGGGATCAAT 60.291 50.000 22.29 0.00 42.11 2.57
3965 4194 2.751259 CCTTGTGTCACTGGGATCAATG 59.249 50.000 4.27 0.00 0.00 2.82
3966 4195 3.415212 CTTGTGTCACTGGGATCAATGT 58.585 45.455 4.27 0.00 0.00 2.71
3967 4196 4.565444 CCTTGTGTCACTGGGATCAATGTA 60.565 45.833 4.27 0.00 0.00 2.29
3968 4197 4.632327 TGTGTCACTGGGATCAATGTAA 57.368 40.909 4.27 0.00 0.00 2.41
3969 4198 4.323417 TGTGTCACTGGGATCAATGTAAC 58.677 43.478 4.27 0.00 0.00 2.50
3970 4199 3.370978 GTGTCACTGGGATCAATGTAACG 59.629 47.826 0.00 0.00 0.00 3.18
3971 4200 3.259625 TGTCACTGGGATCAATGTAACGA 59.740 43.478 0.00 0.00 0.00 3.85
3972 4201 3.617263 GTCACTGGGATCAATGTAACGAC 59.383 47.826 0.00 0.00 0.00 4.34
3973 4202 2.936498 CACTGGGATCAATGTAACGACC 59.064 50.000 0.00 0.00 0.00 4.79
3974 4203 2.093128 ACTGGGATCAATGTAACGACCC 60.093 50.000 0.00 0.00 36.72 4.46
3975 4204 1.134640 TGGGATCAATGTAACGACCCG 60.135 52.381 0.00 0.00 38.75 5.28
3976 4205 1.137479 GGGATCAATGTAACGACCCGA 59.863 52.381 0.00 0.00 0.00 5.14
3977 4206 2.419021 GGGATCAATGTAACGACCCGAA 60.419 50.000 0.00 0.00 0.00 4.30
3978 4207 2.606272 GGATCAATGTAACGACCCGAAC 59.394 50.000 0.00 0.00 0.00 3.95
3979 4208 2.083167 TCAATGTAACGACCCGAACC 57.917 50.000 0.00 0.00 0.00 3.62
3980 4209 1.619827 TCAATGTAACGACCCGAACCT 59.380 47.619 0.00 0.00 0.00 3.50
3981 4210 1.730064 CAATGTAACGACCCGAACCTG 59.270 52.381 0.00 0.00 0.00 4.00
3982 4211 1.259609 ATGTAACGACCCGAACCTGA 58.740 50.000 0.00 0.00 0.00 3.86
3983 4212 1.259609 TGTAACGACCCGAACCTGAT 58.740 50.000 0.00 0.00 0.00 2.90
3984 4213 2.445427 TGTAACGACCCGAACCTGATA 58.555 47.619 0.00 0.00 0.00 2.15
3985 4214 2.824936 TGTAACGACCCGAACCTGATAA 59.175 45.455 0.00 0.00 0.00 1.75
3986 4215 2.667473 AACGACCCGAACCTGATAAG 57.333 50.000 0.00 0.00 0.00 1.73
3987 4216 1.843368 ACGACCCGAACCTGATAAGA 58.157 50.000 0.00 0.00 0.00 2.10
3988 4217 2.385803 ACGACCCGAACCTGATAAGAT 58.614 47.619 0.00 0.00 0.00 2.40
3989 4218 2.764572 ACGACCCGAACCTGATAAGATT 59.235 45.455 0.00 0.00 0.00 2.40
3990 4219 3.181478 ACGACCCGAACCTGATAAGATTC 60.181 47.826 0.00 0.00 0.00 2.52
3991 4220 3.381949 GACCCGAACCTGATAAGATTCG 58.618 50.000 0.00 0.00 42.71 3.34
3992 4221 3.028850 ACCCGAACCTGATAAGATTCGA 58.971 45.455 8.30 0.00 45.18 3.71
3993 4222 3.641906 ACCCGAACCTGATAAGATTCGAT 59.358 43.478 8.30 0.00 45.18 3.59
3994 4223 3.990469 CCCGAACCTGATAAGATTCGATG 59.010 47.826 8.30 0.00 45.18 3.84
3995 4224 4.501571 CCCGAACCTGATAAGATTCGATGT 60.502 45.833 8.30 0.00 45.18 3.06
3996 4225 4.681942 CCGAACCTGATAAGATTCGATGTC 59.318 45.833 8.30 0.00 45.18 3.06
3997 4226 5.508153 CCGAACCTGATAAGATTCGATGTCT 60.508 44.000 8.30 0.00 45.18 3.41
3998 4227 5.627367 CGAACCTGATAAGATTCGATGTCTC 59.373 44.000 0.00 0.00 45.18 3.36
3999 4228 6.514212 CGAACCTGATAAGATTCGATGTCTCT 60.514 42.308 0.00 0.00 45.18 3.10
4000 4229 6.723298 ACCTGATAAGATTCGATGTCTCTT 57.277 37.500 1.80 3.99 33.91 2.85
4001 4230 7.118496 ACCTGATAAGATTCGATGTCTCTTT 57.882 36.000 1.80 0.00 31.89 2.52
4002 4231 6.983307 ACCTGATAAGATTCGATGTCTCTTTG 59.017 38.462 1.80 0.00 31.89 2.77
4003 4232 6.073873 CCTGATAAGATTCGATGTCTCTTTGC 60.074 42.308 1.80 0.00 31.89 3.68
4004 4233 6.577103 TGATAAGATTCGATGTCTCTTTGCT 58.423 36.000 1.80 0.00 31.89 3.91
4005 4234 7.044181 TGATAAGATTCGATGTCTCTTTGCTT 58.956 34.615 1.80 0.00 31.89 3.91
4006 4235 8.197439 TGATAAGATTCGATGTCTCTTTGCTTA 58.803 33.333 1.80 0.00 31.89 3.09
4007 4236 9.202273 GATAAGATTCGATGTCTCTTTGCTTAT 57.798 33.333 0.00 0.00 31.89 1.73
4008 4237 7.856145 AAGATTCGATGTCTCTTTGCTTATT 57.144 32.000 1.80 0.00 0.00 1.40
4009 4238 7.244166 AGATTCGATGTCTCTTTGCTTATTG 57.756 36.000 0.00 0.00 0.00 1.90
4010 4239 6.820656 AGATTCGATGTCTCTTTGCTTATTGT 59.179 34.615 0.00 0.00 0.00 2.71
4011 4240 5.784750 TCGATGTCTCTTTGCTTATTGTG 57.215 39.130 0.00 0.00 0.00 3.33
4012 4241 4.093408 TCGATGTCTCTTTGCTTATTGTGC 59.907 41.667 0.00 0.00 0.00 4.57
4013 4242 4.093998 CGATGTCTCTTTGCTTATTGTGCT 59.906 41.667 0.00 0.00 0.00 4.40
4014 4243 5.291858 CGATGTCTCTTTGCTTATTGTGCTA 59.708 40.000 0.00 0.00 0.00 3.49
4015 4244 6.509199 CGATGTCTCTTTGCTTATTGTGCTAG 60.509 42.308 0.00 0.00 0.00 3.42
4016 4245 5.551233 TGTCTCTTTGCTTATTGTGCTAGT 58.449 37.500 0.00 0.00 0.00 2.57
4017 4246 5.639506 TGTCTCTTTGCTTATTGTGCTAGTC 59.360 40.000 0.00 0.00 0.00 2.59
4018 4247 5.064071 GTCTCTTTGCTTATTGTGCTAGTCC 59.936 44.000 0.00 0.00 0.00 3.85
4019 4248 4.261801 TCTTTGCTTATTGTGCTAGTCCC 58.738 43.478 0.00 0.00 0.00 4.46
4020 4249 4.019321 TCTTTGCTTATTGTGCTAGTCCCT 60.019 41.667 0.00 0.00 0.00 4.20
4021 4250 3.266510 TGCTTATTGTGCTAGTCCCTG 57.733 47.619 0.00 0.00 0.00 4.45
4022 4251 2.092968 TGCTTATTGTGCTAGTCCCTGG 60.093 50.000 0.00 0.00 0.00 4.45
4023 4252 2.170607 GCTTATTGTGCTAGTCCCTGGA 59.829 50.000 0.00 0.00 0.00 3.86
4024 4253 3.181450 GCTTATTGTGCTAGTCCCTGGAT 60.181 47.826 0.00 0.00 0.00 3.41
4025 4254 4.687219 GCTTATTGTGCTAGTCCCTGGATT 60.687 45.833 0.00 0.00 0.00 3.01
4026 4255 2.787473 TTGTGCTAGTCCCTGGATTG 57.213 50.000 0.00 0.00 0.00 2.67
4027 4256 1.951209 TGTGCTAGTCCCTGGATTGA 58.049 50.000 0.00 0.00 0.00 2.57
4028 4257 2.265367 TGTGCTAGTCCCTGGATTGAA 58.735 47.619 0.00 0.00 0.00 2.69
4029 4258 2.846206 TGTGCTAGTCCCTGGATTGAAT 59.154 45.455 0.00 0.00 0.00 2.57
4030 4259 3.118261 TGTGCTAGTCCCTGGATTGAATC 60.118 47.826 0.00 0.00 0.00 2.52
4031 4260 2.103094 TGCTAGTCCCTGGATTGAATCG 59.897 50.000 0.00 0.00 0.00 3.34
4032 4261 2.760374 CTAGTCCCTGGATTGAATCGC 58.240 52.381 0.00 0.00 0.00 4.58
4033 4262 1.207791 AGTCCCTGGATTGAATCGCT 58.792 50.000 0.00 0.00 0.00 4.93
4034 4263 2.398588 AGTCCCTGGATTGAATCGCTA 58.601 47.619 0.00 0.00 0.00 4.26
4035 4264 2.366916 AGTCCCTGGATTGAATCGCTAG 59.633 50.000 0.00 0.00 0.00 3.42
4036 4265 1.070758 TCCCTGGATTGAATCGCTAGC 59.929 52.381 4.06 4.06 0.00 3.42
4037 4266 1.202687 CCCTGGATTGAATCGCTAGCA 60.203 52.381 16.45 2.17 0.00 3.49
4038 4267 1.869767 CCTGGATTGAATCGCTAGCAC 59.130 52.381 16.45 3.50 0.00 4.40
4039 4268 2.554142 CTGGATTGAATCGCTAGCACA 58.446 47.619 16.45 6.19 0.00 4.57
4040 4269 2.279741 TGGATTGAATCGCTAGCACAC 58.720 47.619 16.45 3.50 0.00 3.82
4041 4270 2.279741 GGATTGAATCGCTAGCACACA 58.720 47.619 16.45 6.18 0.00 3.72
4042 4271 2.030946 GGATTGAATCGCTAGCACACAC 59.969 50.000 16.45 2.42 0.00 3.82
4043 4272 2.162319 TTGAATCGCTAGCACACACA 57.838 45.000 16.45 5.10 0.00 3.72
4044 4273 2.162319 TGAATCGCTAGCACACACAA 57.838 45.000 16.45 0.00 0.00 3.33
4045 4274 2.698803 TGAATCGCTAGCACACACAAT 58.301 42.857 16.45 0.00 0.00 2.71
4046 4275 3.855858 TGAATCGCTAGCACACACAATA 58.144 40.909 16.45 0.00 0.00 1.90
4047 4276 3.616821 TGAATCGCTAGCACACACAATAC 59.383 43.478 16.45 0.00 0.00 1.89
4048 4277 2.734276 TCGCTAGCACACACAATACA 57.266 45.000 16.45 0.00 0.00 2.29
4049 4278 3.245518 TCGCTAGCACACACAATACAT 57.754 42.857 16.45 0.00 0.00 2.29
4050 4279 4.379339 TCGCTAGCACACACAATACATA 57.621 40.909 16.45 0.00 0.00 2.29
4051 4280 4.359706 TCGCTAGCACACACAATACATAG 58.640 43.478 16.45 0.00 0.00 2.23
4052 4281 3.490896 CGCTAGCACACACAATACATAGG 59.509 47.826 16.45 0.00 0.00 2.57
4053 4282 4.693283 GCTAGCACACACAATACATAGGA 58.307 43.478 10.63 0.00 0.00 2.94
4054 4283 5.116180 GCTAGCACACACAATACATAGGAA 58.884 41.667 10.63 0.00 0.00 3.36
4055 4284 5.760253 GCTAGCACACACAATACATAGGAAT 59.240 40.000 10.63 0.00 0.00 3.01
4056 4285 6.929049 GCTAGCACACACAATACATAGGAATA 59.071 38.462 10.63 0.00 0.00 1.75
4057 4286 7.604164 GCTAGCACACACAATACATAGGAATAT 59.396 37.037 10.63 0.00 0.00 1.28
4058 4287 7.969536 AGCACACACAATACATAGGAATATC 57.030 36.000 0.00 0.00 0.00 1.63
4059 4288 7.508687 AGCACACACAATACATAGGAATATCA 58.491 34.615 0.00 0.00 0.00 2.15
4060 4289 7.992608 AGCACACACAATACATAGGAATATCAA 59.007 33.333 0.00 0.00 0.00 2.57
4061 4290 8.285394 GCACACACAATACATAGGAATATCAAG 58.715 37.037 0.00 0.00 0.00 3.02
4062 4291 9.330063 CACACACAATACATAGGAATATCAAGT 57.670 33.333 0.00 0.00 0.00 3.16
4071 4300 8.438676 ACATAGGAATATCAAGTAACAAGTGC 57.561 34.615 0.00 0.00 0.00 4.40
4072 4301 8.046708 ACATAGGAATATCAAGTAACAAGTGCA 58.953 33.333 0.00 0.00 0.00 4.57
4073 4302 9.060347 CATAGGAATATCAAGTAACAAGTGCAT 57.940 33.333 0.00 0.00 0.00 3.96
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
206 208 4.218686 GGCCCTGGTGGTGGTTGT 62.219 66.667 0.00 0.00 36.04 3.32
292 297 3.185203 AGGCTTGCCCTGGTTCCA 61.185 61.111 8.17 0.00 44.28 3.53
394 404 0.538584 AGGATCGTGCTCATCTTGCA 59.461 50.000 0.00 0.00 38.19 4.08
397 408 3.376218 GCAGGATCGTGCTCATCTT 57.624 52.632 28.47 0.00 40.54 2.40
581 594 2.654404 GCGTCGGCTCGTCCATAC 60.654 66.667 0.00 0.00 35.83 2.39
682 695 1.961180 ATACTGCCTCTGTCGTGGCC 61.961 60.000 0.00 0.00 46.64 5.36
684 697 2.386661 AAATACTGCCTCTGTCGTGG 57.613 50.000 0.00 0.00 0.00 4.94
685 698 6.250819 CAAATTAAATACTGCCTCTGTCGTG 58.749 40.000 0.00 0.00 0.00 4.35
686 699 5.163754 GCAAATTAAATACTGCCTCTGTCGT 60.164 40.000 0.00 0.00 0.00 4.34
687 700 5.163764 TGCAAATTAAATACTGCCTCTGTCG 60.164 40.000 0.00 0.00 33.78 4.35
688 701 6.194796 TGCAAATTAAATACTGCCTCTGTC 57.805 37.500 0.00 0.00 33.78 3.51
689 702 6.153340 ACATGCAAATTAAATACTGCCTCTGT 59.847 34.615 0.00 0.00 33.78 3.41
690 703 6.567050 ACATGCAAATTAAATACTGCCTCTG 58.433 36.000 0.00 0.00 33.78 3.35
691 704 6.604795 AGACATGCAAATTAAATACTGCCTCT 59.395 34.615 0.00 0.00 33.78 3.69
692 705 6.799512 AGACATGCAAATTAAATACTGCCTC 58.200 36.000 0.00 0.00 33.78 4.70
693 706 6.780457 AGACATGCAAATTAAATACTGCCT 57.220 33.333 0.00 0.00 33.78 4.75
694 707 7.479980 TGTAGACATGCAAATTAAATACTGCC 58.520 34.615 0.00 0.00 33.78 4.85
695 708 8.909708 TTGTAGACATGCAAATTAAATACTGC 57.090 30.769 0.00 0.00 35.32 4.40
731 745 5.404366 CACTTCGATAAAAGTTCGTTCAGGA 59.596 40.000 0.00 0.00 37.38 3.86
773 787 4.687215 GTGCAGCGCCAGACTCCA 62.687 66.667 2.29 0.00 0.00 3.86
775 789 3.418068 GTGTGCAGCGCCAGACTC 61.418 66.667 2.29 0.00 0.00 3.36
776 790 3.933722 AGTGTGCAGCGCCAGACT 61.934 61.111 10.06 10.06 34.84 3.24
777 791 3.720193 CAGTGTGCAGCGCCAGAC 61.720 66.667 2.29 4.59 0.00 3.51
787 803 4.612536 GTGTGCGTGGCAGTGTGC 62.613 66.667 0.00 0.00 40.08 4.57
851 867 6.534475 TTAAGACGCAGAGGGTATTAAGAA 57.466 37.500 9.11 0.00 37.28 2.52
859 875 4.820894 AATAGTTTAAGACGCAGAGGGT 57.179 40.909 0.00 0.00 0.00 4.34
959 975 0.249911 AACCGTGAAGAGGCTCACAC 60.250 55.000 24.58 24.58 45.03 3.82
994 1029 3.455469 GGTGGAAGCCATGCCTGC 61.455 66.667 0.00 0.00 35.28 4.85
995 1030 2.050350 CAGGTGGAAGCCATGCCTG 61.050 63.158 8.25 8.25 40.01 4.85
1043 1078 9.209175 GTATAGTTTGACAAGTCACAAGAGATT 57.791 33.333 1.73 0.00 39.66 2.40
1053 1088 3.858247 AGGCCGTATAGTTTGACAAGTC 58.142 45.455 0.00 0.00 0.00 3.01
1054 1089 3.514309 AGAGGCCGTATAGTTTGACAAGT 59.486 43.478 0.00 0.00 0.00 3.16
1055 1090 4.113354 GAGAGGCCGTATAGTTTGACAAG 58.887 47.826 0.00 0.00 0.00 3.16
1056 1091 3.512329 TGAGAGGCCGTATAGTTTGACAA 59.488 43.478 0.00 0.00 0.00 3.18
1057 1092 3.093814 TGAGAGGCCGTATAGTTTGACA 58.906 45.455 0.00 0.00 0.00 3.58
1058 1093 3.707793 CTGAGAGGCCGTATAGTTTGAC 58.292 50.000 0.00 0.00 0.00 3.18
1059 1094 2.100916 GCTGAGAGGCCGTATAGTTTGA 59.899 50.000 0.00 0.00 0.00 2.69
1063 1098 2.002505 ATGCTGAGAGGCCGTATAGT 57.997 50.000 0.00 0.00 0.00 2.12
1245 1287 7.883833 AGTTATACTATCTCAGCAGAATACGGA 59.116 37.037 0.00 0.00 30.24 4.69
1278 1320 5.046304 ACTTCATCAGCAAGTATGTACAGGT 60.046 40.000 0.33 0.00 32.08 4.00
1333 1375 1.586564 GGCCTTCTCGTCGATGTCG 60.587 63.158 4.21 0.00 41.45 4.35
1396 1438 0.539669 AGCTTGTTGGTACCTTGGCC 60.540 55.000 14.36 0.00 0.00 5.36
1478 1521 1.448540 CGCGATCAAGAAGCACCCT 60.449 57.895 0.00 0.00 0.00 4.34
1614 1676 3.106672 CTCGAGTAGTCACGGTTTATGC 58.893 50.000 3.62 0.00 0.00 3.14
1751 1826 5.836347 AGAAGGTGATCAAAACTCAAAAGC 58.164 37.500 0.00 0.00 0.00 3.51
1759 1834 4.554723 CGTCCACAAGAAGGTGATCAAAAC 60.555 45.833 0.00 0.00 41.32 2.43
1761 1836 3.138304 CGTCCACAAGAAGGTGATCAAA 58.862 45.455 0.00 0.00 41.32 2.69
1763 1838 1.608025 GCGTCCACAAGAAGGTGATCA 60.608 52.381 0.00 0.00 41.32 2.92
1765 1840 0.670546 CGCGTCCACAAGAAGGTGAT 60.671 55.000 0.00 0.00 41.32 3.06
1766 1841 1.300620 CGCGTCCACAAGAAGGTGA 60.301 57.895 0.00 0.00 41.32 4.02
1767 1842 2.954753 GCGCGTCCACAAGAAGGTG 61.955 63.158 8.43 0.00 38.52 4.00
1768 1843 2.665185 GCGCGTCCACAAGAAGGT 60.665 61.111 8.43 0.00 0.00 3.50
1769 1844 3.777925 CGCGCGTCCACAAGAAGG 61.778 66.667 24.19 0.00 0.00 3.46
1782 1857 1.762222 ATTGTATCTTGTCCGCGCGC 61.762 55.000 27.36 23.91 0.00 6.86
1784 1859 2.411547 GCATATTGTATCTTGTCCGCGC 60.412 50.000 0.00 0.00 0.00 6.86
1786 1861 6.457392 CCATATGCATATTGTATCTTGTCCGC 60.457 42.308 16.71 0.00 0.00 5.54
1787 1862 6.457392 GCCATATGCATATTGTATCTTGTCCG 60.457 42.308 16.71 1.15 40.77 4.79
1788 1863 6.600822 AGCCATATGCATATTGTATCTTGTCC 59.399 38.462 16.71 0.00 44.83 4.02
1789 1864 7.120285 ACAGCCATATGCATATTGTATCTTGTC 59.880 37.037 16.71 0.00 44.83 3.18
1879 1954 4.283337 TCAGGTTGGTCACGAGGATATAA 58.717 43.478 0.00 0.00 0.00 0.98
1883 1958 0.898320 CTCAGGTTGGTCACGAGGAT 59.102 55.000 0.00 0.00 0.00 3.24
1885 1960 1.374758 GCTCAGGTTGGTCACGAGG 60.375 63.158 0.00 0.00 0.00 4.63
1888 1963 1.961277 GGTGCTCAGGTTGGTCACG 60.961 63.158 0.00 0.00 0.00 4.35
1973 2048 4.104738 AGTTTCAGTCTCAAATTCCAGGGA 59.895 41.667 0.00 0.00 0.00 4.20
1975 2050 5.049129 GTGAGTTTCAGTCTCAAATTCCAGG 60.049 44.000 0.00 0.00 42.42 4.45
1978 2053 4.821805 TGGTGAGTTTCAGTCTCAAATTCC 59.178 41.667 0.00 0.00 42.42 3.01
1979 2054 6.205464 TCATGGTGAGTTTCAGTCTCAAATTC 59.795 38.462 0.00 0.00 42.42 2.17
1980 2055 6.064060 TCATGGTGAGTTTCAGTCTCAAATT 58.936 36.000 0.00 0.00 42.42 1.82
1981 2056 5.624159 TCATGGTGAGTTTCAGTCTCAAAT 58.376 37.500 0.00 0.00 42.42 2.32
1983 2058 4.687901 TCATGGTGAGTTTCAGTCTCAA 57.312 40.909 0.00 0.00 42.42 3.02
2017 2097 6.712095 GGTGAAAATATATCAGCAGATGGACA 59.288 38.462 13.04 0.00 43.11 4.02
2028 2108 7.655732 CGTCTGGTATGTGGTGAAAATATATCA 59.344 37.037 0.00 0.00 0.00 2.15
2032 2112 5.984725 TCGTCTGGTATGTGGTGAAAATAT 58.015 37.500 0.00 0.00 0.00 1.28
2071 2151 4.141367 TGTTGGTCAGGGATTGAACTTACA 60.141 41.667 0.00 0.00 44.23 2.41
2088 2170 1.985460 TAAGGGTGCGGTGTGTTGGT 61.985 55.000 0.00 0.00 0.00 3.67
2111 2194 9.692749 TGGTTGATGTTATTTGCGTTTAAAATA 57.307 25.926 0.00 0.00 0.00 1.40
2113 2196 8.594881 ATGGTTGATGTTATTTGCGTTTAAAA 57.405 26.923 0.00 0.00 0.00 1.52
2142 2226 7.435784 GGTCTCTTCTTTCTTATACTAAAGCGG 59.564 40.741 0.00 0.00 33.61 5.52
2145 2229 9.308318 GCAGGTCTCTTCTTTCTTATACTAAAG 57.692 37.037 0.00 0.00 34.65 1.85
2147 2231 8.596781 AGCAGGTCTCTTCTTTCTTATACTAA 57.403 34.615 0.00 0.00 0.00 2.24
2148 2232 9.122779 GTAGCAGGTCTCTTCTTTCTTATACTA 57.877 37.037 0.00 0.00 0.00 1.82
2149 2233 7.616150 TGTAGCAGGTCTCTTCTTTCTTATACT 59.384 37.037 0.00 0.00 0.00 2.12
2150 2234 7.703197 GTGTAGCAGGTCTCTTCTTTCTTATAC 59.297 40.741 0.00 0.00 0.00 1.47
2151 2235 7.415318 CGTGTAGCAGGTCTCTTCTTTCTTATA 60.415 40.741 0.00 0.00 0.00 0.98
2154 2238 4.559704 CGTGTAGCAGGTCTCTTCTTTCTT 60.560 45.833 0.00 0.00 0.00 2.52
2155 2239 3.057174 CGTGTAGCAGGTCTCTTCTTTCT 60.057 47.826 0.00 0.00 0.00 2.52
2156 2240 3.246619 CGTGTAGCAGGTCTCTTCTTTC 58.753 50.000 0.00 0.00 0.00 2.62
2157 2241 2.628657 ACGTGTAGCAGGTCTCTTCTTT 59.371 45.455 0.00 0.00 0.00 2.52
2158 2242 2.240279 ACGTGTAGCAGGTCTCTTCTT 58.760 47.619 0.00 0.00 0.00 2.52
2160 2244 2.475852 CGTACGTGTAGCAGGTCTCTTC 60.476 54.545 7.22 0.00 34.30 2.87
2161 2245 1.467734 CGTACGTGTAGCAGGTCTCTT 59.532 52.381 7.22 0.00 34.30 2.85
2162 2246 1.085091 CGTACGTGTAGCAGGTCTCT 58.915 55.000 7.22 0.00 34.30 3.10
2163 2247 1.081892 TCGTACGTGTAGCAGGTCTC 58.918 55.000 16.05 0.00 34.30 3.36
2164 2248 0.801251 GTCGTACGTGTAGCAGGTCT 59.199 55.000 16.05 0.00 34.30 3.85
2165 2249 0.518636 TGTCGTACGTGTAGCAGGTC 59.481 55.000 16.05 0.00 34.30 3.85
2166 2250 0.953727 TTGTCGTACGTGTAGCAGGT 59.046 50.000 16.05 0.31 36.44 4.00
2167 2251 1.334054 GTTGTCGTACGTGTAGCAGG 58.666 55.000 16.05 0.00 0.00 4.85
2168 2252 1.068748 AGGTTGTCGTACGTGTAGCAG 60.069 52.381 16.05 0.00 0.00 4.24
2169 2253 0.953727 AGGTTGTCGTACGTGTAGCA 59.046 50.000 16.05 5.29 0.00 3.49
2170 2254 2.056094 AAGGTTGTCGTACGTGTAGC 57.944 50.000 16.05 10.66 0.00 3.58
2171 2255 3.374745 ACAAAGGTTGTCGTACGTGTAG 58.625 45.455 16.05 0.05 40.56 2.74
2172 2256 3.435105 ACAAAGGTTGTCGTACGTGTA 57.565 42.857 16.05 0.00 40.56 2.90
2173 2257 2.298411 ACAAAGGTTGTCGTACGTGT 57.702 45.000 16.05 6.61 40.56 4.49
2174 2258 3.982701 TCATACAAAGGTTGTCGTACGTG 59.017 43.478 16.05 5.93 44.12 4.49
2175 2259 4.241590 TCATACAAAGGTTGTCGTACGT 57.758 40.909 16.05 0.00 44.12 3.57
2176 2260 5.773239 AATCATACAAAGGTTGTCGTACG 57.227 39.130 9.53 9.53 44.12 3.67
2177 2261 7.858879 ACAAAAATCATACAAAGGTTGTCGTAC 59.141 33.333 0.00 0.00 44.12 3.67
2178 2262 7.932335 ACAAAAATCATACAAAGGTTGTCGTA 58.068 30.769 0.00 0.00 44.12 3.43
2179 2263 6.801575 ACAAAAATCATACAAAGGTTGTCGT 58.198 32.000 0.00 0.00 44.12 4.34
2180 2264 7.059033 CGTACAAAAATCATACAAAGGTTGTCG 59.941 37.037 0.00 0.00 44.12 4.35
2181 2265 8.071368 TCGTACAAAAATCATACAAAGGTTGTC 58.929 33.333 0.00 0.00 44.12 3.18
2183 2267 7.858382 TGTCGTACAAAAATCATACAAAGGTTG 59.142 33.333 0.00 0.00 0.00 3.77
2184 2268 7.932335 TGTCGTACAAAAATCATACAAAGGTT 58.068 30.769 0.00 0.00 0.00 3.50
2185 2269 7.499321 TGTCGTACAAAAATCATACAAAGGT 57.501 32.000 0.00 0.00 0.00 3.50
2186 2270 6.523201 GCTGTCGTACAAAAATCATACAAAGG 59.477 38.462 0.00 0.00 0.00 3.11
2187 2271 6.523201 GGCTGTCGTACAAAAATCATACAAAG 59.477 38.462 0.00 0.00 0.00 2.77
2188 2272 6.017026 TGGCTGTCGTACAAAAATCATACAAA 60.017 34.615 0.00 0.00 0.00 2.83
2189 2273 5.470437 TGGCTGTCGTACAAAAATCATACAA 59.530 36.000 0.00 0.00 0.00 2.41
2190 2274 4.998033 TGGCTGTCGTACAAAAATCATACA 59.002 37.500 0.00 0.00 0.00 2.29
2191 2275 5.539582 TGGCTGTCGTACAAAAATCATAC 57.460 39.130 0.00 0.00 0.00 2.39
2192 2276 5.877564 TGATGGCTGTCGTACAAAAATCATA 59.122 36.000 0.00 0.00 0.00 2.15
2193 2277 4.699735 TGATGGCTGTCGTACAAAAATCAT 59.300 37.500 0.00 0.00 0.00 2.45
2194 2278 4.068599 TGATGGCTGTCGTACAAAAATCA 58.931 39.130 0.00 0.00 0.00 2.57
2195 2279 4.651994 CTGATGGCTGTCGTACAAAAATC 58.348 43.478 0.00 0.00 0.00 2.17
2196 2280 3.119849 GCTGATGGCTGTCGTACAAAAAT 60.120 43.478 0.00 0.00 38.06 1.82
2197 2281 2.225491 GCTGATGGCTGTCGTACAAAAA 59.775 45.455 0.00 0.00 38.06 1.94
2198 2282 1.804151 GCTGATGGCTGTCGTACAAAA 59.196 47.619 0.00 0.00 38.06 2.44
2199 2283 1.270571 TGCTGATGGCTGTCGTACAAA 60.271 47.619 0.00 0.00 42.39 2.83
2200 2284 0.320050 TGCTGATGGCTGTCGTACAA 59.680 50.000 0.00 0.00 42.39 2.41
2201 2285 0.108662 CTGCTGATGGCTGTCGTACA 60.109 55.000 0.00 0.00 42.39 2.90
2202 2286 1.424493 GCTGCTGATGGCTGTCGTAC 61.424 60.000 0.00 0.00 42.39 3.67
2203 2287 1.153568 GCTGCTGATGGCTGTCGTA 60.154 57.895 0.00 0.00 42.39 3.43
2204 2288 2.435586 GCTGCTGATGGCTGTCGT 60.436 61.111 0.00 0.00 42.39 4.34
2205 2289 3.200593 GGCTGCTGATGGCTGTCG 61.201 66.667 0.00 0.00 42.39 4.35
2206 2290 3.200593 CGGCTGCTGATGGCTGTC 61.201 66.667 1.17 0.00 42.39 3.51
2207 2291 4.025858 ACGGCTGCTGATGGCTGT 62.026 61.111 16.72 0.00 42.39 4.40
2208 2292 2.749044 AACGGCTGCTGATGGCTG 60.749 61.111 16.72 0.00 42.39 4.85
2209 2293 2.547640 ATCAACGGCTGCTGATGGCT 62.548 55.000 16.72 2.36 42.39 4.75
2210 2294 1.660560 AATCAACGGCTGCTGATGGC 61.661 55.000 16.72 0.00 42.22 4.40
2211 2295 1.667236 TAATCAACGGCTGCTGATGG 58.333 50.000 16.72 4.04 31.45 3.51
2212 2296 3.763097 TTTAATCAACGGCTGCTGATG 57.237 42.857 16.72 14.16 31.45 3.07
2213 2297 4.202050 GGAATTTAATCAACGGCTGCTGAT 60.202 41.667 16.72 5.57 32.35 2.90
2214 2298 3.128589 GGAATTTAATCAACGGCTGCTGA 59.871 43.478 16.72 0.14 0.00 4.26
2215 2299 3.119531 TGGAATTTAATCAACGGCTGCTG 60.120 43.478 6.98 6.98 0.00 4.41
2216 2300 3.088532 TGGAATTTAATCAACGGCTGCT 58.911 40.909 0.00 0.00 0.00 4.24
2217 2301 3.179048 GTGGAATTTAATCAACGGCTGC 58.821 45.455 0.00 0.00 0.00 5.25
2218 2302 4.433186 TGTGGAATTTAATCAACGGCTG 57.567 40.909 0.00 0.00 0.00 4.85
2219 2303 5.220777 CGTATGTGGAATTTAATCAACGGCT 60.221 40.000 0.00 0.00 0.00 5.52
2220 2304 4.967575 CGTATGTGGAATTTAATCAACGGC 59.032 41.667 0.00 0.00 0.00 5.68
2221 2305 6.036735 ACTCGTATGTGGAATTTAATCAACGG 59.963 38.462 0.00 0.00 0.00 4.44
2222 2306 6.899771 CACTCGTATGTGGAATTTAATCAACG 59.100 38.462 0.00 0.00 34.56 4.10
2223 2307 7.970384 TCACTCGTATGTGGAATTTAATCAAC 58.030 34.615 0.00 0.00 38.40 3.18
2224 2308 8.038351 TCTCACTCGTATGTGGAATTTAATCAA 58.962 33.333 0.00 0.00 38.40 2.57
2225 2309 7.552459 TCTCACTCGTATGTGGAATTTAATCA 58.448 34.615 0.00 0.00 38.40 2.57
2226 2310 8.594881 ATCTCACTCGTATGTGGAATTTAATC 57.405 34.615 0.00 0.00 38.40 1.75
2227 2311 8.204160 TGATCTCACTCGTATGTGGAATTTAAT 58.796 33.333 0.00 0.00 38.40 1.40
2228 2312 7.491372 GTGATCTCACTCGTATGTGGAATTTAA 59.509 37.037 3.07 0.00 43.25 1.52
2229 2313 6.978659 GTGATCTCACTCGTATGTGGAATTTA 59.021 38.462 3.07 0.00 43.25 1.40
2230 2314 5.812642 GTGATCTCACTCGTATGTGGAATTT 59.187 40.000 3.07 0.00 43.25 1.82
2231 2315 5.352284 GTGATCTCACTCGTATGTGGAATT 58.648 41.667 3.07 0.00 43.25 2.17
2232 2316 4.498177 CGTGATCTCACTCGTATGTGGAAT 60.498 45.833 8.57 0.00 44.34 3.01
2233 2317 3.181500 CGTGATCTCACTCGTATGTGGAA 60.181 47.826 8.57 0.00 44.34 3.53
2234 2318 2.354821 CGTGATCTCACTCGTATGTGGA 59.645 50.000 8.57 0.00 44.34 4.02
2235 2319 2.097629 ACGTGATCTCACTCGTATGTGG 59.902 50.000 8.57 0.00 44.34 4.17
2236 2320 3.101546 CACGTGATCTCACTCGTATGTG 58.898 50.000 10.90 4.55 44.34 3.21
2237 2321 2.097629 CCACGTGATCTCACTCGTATGT 59.902 50.000 19.30 0.00 44.34 2.29
2238 2322 2.097629 ACCACGTGATCTCACTCGTATG 59.902 50.000 19.30 0.00 44.34 2.39
2239 2323 2.366533 ACCACGTGATCTCACTCGTAT 58.633 47.619 19.30 0.00 44.34 3.06
2240 2324 1.817357 ACCACGTGATCTCACTCGTA 58.183 50.000 19.30 0.00 44.34 3.43
2241 2325 1.467734 GTACCACGTGATCTCACTCGT 59.532 52.381 19.30 5.29 44.34 4.18
2242 2326 1.467342 TGTACCACGTGATCTCACTCG 59.533 52.381 19.30 0.00 44.34 4.18
2243 2327 3.784701 ATGTACCACGTGATCTCACTC 57.215 47.619 19.30 0.00 44.34 3.51
2244 2328 5.654603 TTTATGTACCACGTGATCTCACT 57.345 39.130 19.30 0.00 44.34 3.41
2245 2329 5.173312 CGATTTATGTACCACGTGATCTCAC 59.827 44.000 19.30 7.50 43.15 3.51
2246 2330 5.163591 ACGATTTATGTACCACGTGATCTCA 60.164 40.000 19.30 10.80 32.93 3.27
2247 2331 5.279384 ACGATTTATGTACCACGTGATCTC 58.721 41.667 19.30 5.14 32.93 2.75
2248 2332 5.258456 ACGATTTATGTACCACGTGATCT 57.742 39.130 19.30 0.99 32.93 2.75
2249 2333 5.114572 CGTACGATTTATGTACCACGTGATC 59.885 44.000 19.30 8.29 39.16 2.92
2250 2334 4.971830 CGTACGATTTATGTACCACGTGAT 59.028 41.667 19.30 0.54 39.16 3.06
2251 2335 4.341935 CGTACGATTTATGTACCACGTGA 58.658 43.478 19.30 0.00 39.16 4.35
2252 2336 3.061666 GCGTACGATTTATGTACCACGTG 60.062 47.826 21.65 9.08 39.16 4.49
2253 2337 3.108144 GCGTACGATTTATGTACCACGT 58.892 45.455 21.65 0.00 39.16 4.49
2254 2338 3.107407 TGCGTACGATTTATGTACCACG 58.893 45.455 21.65 0.00 39.16 4.94
2255 2339 4.107622 ACTGCGTACGATTTATGTACCAC 58.892 43.478 21.65 0.00 39.16 4.16
2256 2340 4.374843 ACTGCGTACGATTTATGTACCA 57.625 40.909 21.65 1.92 39.16 3.25
2257 2341 5.707411 AAACTGCGTACGATTTATGTACC 57.293 39.130 21.65 0.00 39.16 3.34
2258 2342 6.754206 TGAAAACTGCGTACGATTTATGTAC 58.246 36.000 21.65 0.00 39.01 2.90
2259 2343 6.947903 TGAAAACTGCGTACGATTTATGTA 57.052 33.333 21.65 0.00 0.00 2.29
2260 2344 5.849357 TGAAAACTGCGTACGATTTATGT 57.151 34.783 21.65 4.54 0.00 2.29
2261 2345 5.611596 CGATGAAAACTGCGTACGATTTATG 59.388 40.000 21.65 3.90 0.00 1.90
2262 2346 5.290158 ACGATGAAAACTGCGTACGATTTAT 59.710 36.000 21.65 7.17 34.93 1.40
2263 2347 4.622313 ACGATGAAAACTGCGTACGATTTA 59.378 37.500 21.65 2.56 34.93 1.40
2264 2348 3.430895 ACGATGAAAACTGCGTACGATTT 59.569 39.130 21.65 12.71 34.93 2.17
2265 2349 2.991190 ACGATGAAAACTGCGTACGATT 59.009 40.909 21.65 6.75 34.93 3.34
2266 2350 2.602878 ACGATGAAAACTGCGTACGAT 58.397 42.857 21.65 0.00 34.93 3.73
2267 2351 2.054687 ACGATGAAAACTGCGTACGA 57.945 45.000 21.65 3.19 34.93 3.43
2268 2352 3.834302 CATACGATGAAAACTGCGTACG 58.166 45.455 11.84 11.84 41.29 3.67
2269 2353 3.061563 TGCATACGATGAAAACTGCGTAC 59.938 43.478 0.00 0.00 41.29 3.67
2270 2354 3.254892 TGCATACGATGAAAACTGCGTA 58.745 40.909 0.00 0.00 42.44 4.42
2271 2355 2.073056 TGCATACGATGAAAACTGCGT 58.927 42.857 0.00 0.00 40.42 5.24
2272 2356 2.348362 TCTGCATACGATGAAAACTGCG 59.652 45.455 0.00 0.00 32.42 5.18
2273 2357 3.786818 GCTCTGCATACGATGAAAACTGC 60.787 47.826 0.00 0.00 0.00 4.40
2274 2358 3.371898 TGCTCTGCATACGATGAAAACTG 59.628 43.478 0.00 0.00 31.71 3.16
2275 2359 3.599343 TGCTCTGCATACGATGAAAACT 58.401 40.909 0.00 0.00 31.71 2.66
2276 2360 4.340894 TTGCTCTGCATACGATGAAAAC 57.659 40.909 0.00 0.00 38.76 2.43
2277 2361 5.565592 AATTGCTCTGCATACGATGAAAA 57.434 34.783 0.00 0.00 38.76 2.29
2278 2362 5.565592 AAATTGCTCTGCATACGATGAAA 57.434 34.783 0.00 0.00 38.76 2.69
2279 2363 4.260334 CGAAATTGCTCTGCATACGATGAA 60.260 41.667 0.00 0.00 38.76 2.57
2280 2364 3.245990 CGAAATTGCTCTGCATACGATGA 59.754 43.478 0.00 0.00 38.76 2.92
2281 2365 3.245990 TCGAAATTGCTCTGCATACGATG 59.754 43.478 0.00 0.00 38.76 3.84
2282 2366 3.457234 TCGAAATTGCTCTGCATACGAT 58.543 40.909 0.00 0.00 38.76 3.73
2283 2367 2.887337 TCGAAATTGCTCTGCATACGA 58.113 42.857 0.00 0.00 38.76 3.43
2284 2368 3.306973 TCTTCGAAATTGCTCTGCATACG 59.693 43.478 0.00 0.00 38.76 3.06
2285 2369 4.864916 TCTTCGAAATTGCTCTGCATAC 57.135 40.909 0.00 0.00 38.76 2.39
2286 2370 5.878332 TTTCTTCGAAATTGCTCTGCATA 57.122 34.783 0.00 0.00 38.76 3.14
2287 2371 4.771590 TTTCTTCGAAATTGCTCTGCAT 57.228 36.364 0.00 0.00 38.76 3.96
2288 2372 4.771590 ATTTCTTCGAAATTGCTCTGCA 57.228 36.364 0.00 0.00 36.47 4.41
2289 2373 6.032880 GTGTTATTTCTTCGAAATTGCTCTGC 59.967 38.462 7.09 0.00 0.00 4.26
2290 2374 7.301054 AGTGTTATTTCTTCGAAATTGCTCTG 58.699 34.615 7.09 0.00 0.00 3.35
2291 2375 7.440523 AGTGTTATTTCTTCGAAATTGCTCT 57.559 32.000 7.09 5.03 0.00 4.09
2292 2376 9.214953 CATAGTGTTATTTCTTCGAAATTGCTC 57.785 33.333 7.09 3.30 0.00 4.26
2293 2377 7.698130 GCATAGTGTTATTTCTTCGAAATTGCT 59.302 33.333 7.09 4.43 0.00 3.91
2294 2378 7.484641 TGCATAGTGTTATTTCTTCGAAATTGC 59.515 33.333 7.09 9.14 0.00 3.56
2295 2379 8.894409 TGCATAGTGTTATTTCTTCGAAATTG 57.106 30.769 7.09 0.42 0.00 2.32
2296 2380 9.906660 TTTGCATAGTGTTATTTCTTCGAAATT 57.093 25.926 7.09 0.00 0.00 1.82
2341 2428 1.553248 TCCACTCCCAATGAACGTAGG 59.447 52.381 0.00 0.00 0.00 3.18
2342 2429 3.198068 CATCCACTCCCAATGAACGTAG 58.802 50.000 0.00 0.00 0.00 3.51
2343 2430 2.093181 CCATCCACTCCCAATGAACGTA 60.093 50.000 0.00 0.00 0.00 3.57
2351 2438 2.307392 TCGATTTTCCATCCACTCCCAA 59.693 45.455 0.00 0.00 0.00 4.12
2358 2445 7.277539 GCAATAAAATGTTCGATTTTCCATCCA 59.722 33.333 0.00 0.00 33.73 3.41
2382 2470 5.079689 TCCTCGTGACACTATAAATTGCA 57.920 39.130 3.68 0.00 0.00 4.08
2396 2484 2.628178 ACTGAAGTTGTCATCCTCGTGA 59.372 45.455 0.00 0.00 35.07 4.35
2398 2486 3.753294 AACTGAAGTTGTCATCCTCGT 57.247 42.857 0.00 0.00 36.80 4.18
2400 2488 3.565482 TGCAAACTGAAGTTGTCATCCTC 59.435 43.478 0.00 0.00 38.44 3.71
2409 2497 2.736400 GCTGTGCTTGCAAACTGAAGTT 60.736 45.455 11.14 0.00 40.50 2.66
2414 2502 3.349088 TTGCTGTGCTTGCAAACTG 57.651 47.368 0.00 2.12 45.81 3.16
2526 2615 1.113788 GCTGGGAAGCATGGCAATTA 58.886 50.000 0.00 0.00 34.41 1.40
2545 2634 1.986378 CTCTTAACCAGCGAACGTCAG 59.014 52.381 0.00 0.00 0.00 3.51
2548 2637 0.037605 CCCTCTTAACCAGCGAACGT 60.038 55.000 0.00 0.00 0.00 3.99
2563 2652 2.039879 TGGCTTGACTTTTAGGACCCTC 59.960 50.000 0.00 0.00 0.00 4.30
2588 2677 0.094730 ACGTAAATTGAAGCGCTCGC 59.905 50.000 12.06 6.86 42.33 5.03
2651 2740 7.973388 CGTCTATTTGATCAATTAAGGCCAAAA 59.027 33.333 9.40 0.00 0.00 2.44
2716 2806 8.522830 CCCAAAGAAGTTGCATATTTTAGAGAA 58.477 33.333 0.00 0.00 35.74 2.87
2717 2807 7.669722 ACCCAAAGAAGTTGCATATTTTAGAGA 59.330 33.333 0.00 0.00 35.74 3.10
2718 2808 7.830739 ACCCAAAGAAGTTGCATATTTTAGAG 58.169 34.615 0.00 0.00 35.74 2.43
2741 2831 7.968405 GTGAAATGTGTCATTAGTCCATTAACC 59.032 37.037 0.00 0.00 0.00 2.85
2836 2936 2.607038 CGGCAAAGATGATGGATGCATG 60.607 50.000 2.46 0.00 38.73 4.06
2878 2978 6.503041 AGTAGGGGCTATTTGGAAGAATTTT 58.497 36.000 0.00 0.00 0.00 1.82
2904 3004 3.189080 TGCAGTTCCATCTCGACATTTTG 59.811 43.478 0.00 0.00 0.00 2.44
2909 3009 3.243873 GGATATGCAGTTCCATCTCGACA 60.244 47.826 11.80 0.00 31.99 4.35
2910 3010 3.243873 TGGATATGCAGTTCCATCTCGAC 60.244 47.826 14.70 0.00 37.10 4.20
2911 3011 2.965147 TGGATATGCAGTTCCATCTCGA 59.035 45.455 14.70 0.00 37.10 4.04
2912 3012 3.062763 GTGGATATGCAGTTCCATCTCG 58.937 50.000 19.97 0.00 43.61 4.04
2915 3015 4.274459 GTGAAGTGGATATGCAGTTCCATC 59.726 45.833 30.59 20.84 43.61 3.51
2916 3016 4.080129 AGTGAAGTGGATATGCAGTTCCAT 60.080 41.667 30.59 20.83 43.61 3.41
2917 3017 3.264193 AGTGAAGTGGATATGCAGTTCCA 59.736 43.478 30.59 20.37 39.70 3.53
2920 3022 4.292186 ACAGTGAAGTGGATATGCAGTT 57.708 40.909 16.31 16.31 0.00 3.16
2949 3053 3.243035 CGCAGAAACCAAAACAGTGATGA 60.243 43.478 0.00 0.00 0.00 2.92
3016 3120 1.001406 AGCTTCTCGGTGAGGTTCTTG 59.999 52.381 0.00 0.00 0.00 3.02
3018 3122 0.892063 GAGCTTCTCGGTGAGGTTCT 59.108 55.000 0.00 0.00 31.19 3.01
3142 3283 7.187824 TGCTTCTGGACTCTTACTTGAATAT 57.812 36.000 0.00 0.00 0.00 1.28
3164 3305 4.454728 TGGTCCTTTATCAAGCAATTGC 57.545 40.909 23.05 23.05 42.49 3.56
3183 3324 0.249398 CACCCTAACCGAGGTCTTGG 59.751 60.000 2.77 2.77 45.03 3.61
3184 3325 1.263356 TCACCCTAACCGAGGTCTTG 58.737 55.000 0.00 0.00 45.03 3.02
3188 3329 1.558294 GGAAATCACCCTAACCGAGGT 59.442 52.381 0.00 0.00 45.03 3.85
3247 3388 7.968405 GCAGTAGGGTTTTATGTGTTTTATCAG 59.032 37.037 0.00 0.00 0.00 2.90
3314 3457 6.437793 ACTTACTCTACTTTGCTGTATCACCT 59.562 38.462 0.00 0.00 0.00 4.00
3321 3464 7.038231 AGGGAAATACTTACTCTACTTTGCTGT 60.038 37.037 0.00 0.00 0.00 4.40
3359 3508 6.615316 TGTCTCCTATTGGATTGATACCTTGA 59.385 38.462 0.00 0.00 42.29 3.02
3375 3524 4.503296 GGTGACTTGTGTGTTGTCTCCTAT 60.503 45.833 0.00 0.00 39.71 2.57
3588 3789 6.598064 CCCGGGTCTATTTTCCATCATATAAC 59.402 42.308 14.18 0.00 0.00 1.89
3642 3847 8.047911 TCACCCACCGTAATATTTTTGATCTTA 58.952 33.333 0.00 0.00 0.00 2.10
3714 3935 4.627467 GGACGTGATGCCTATATTCATGAC 59.373 45.833 0.00 0.00 32.11 3.06
3948 4177 3.370978 CGTTACATTGATCCCAGTGACAC 59.629 47.826 0.00 0.00 34.54 3.67
3964 4193 1.259609 ATCAGGTTCGGGTCGTTACA 58.740 50.000 0.00 0.00 0.00 2.41
3965 4194 3.129287 TCTTATCAGGTTCGGGTCGTTAC 59.871 47.826 0.00 0.00 0.00 2.50
3966 4195 3.355378 TCTTATCAGGTTCGGGTCGTTA 58.645 45.455 0.00 0.00 0.00 3.18
3967 4196 2.173519 TCTTATCAGGTTCGGGTCGTT 58.826 47.619 0.00 0.00 0.00 3.85
3968 4197 1.843368 TCTTATCAGGTTCGGGTCGT 58.157 50.000 0.00 0.00 0.00 4.34
3969 4198 3.381949 GAATCTTATCAGGTTCGGGTCG 58.618 50.000 0.00 0.00 30.26 4.79
3975 4204 6.744112 AGAGACATCGAATCTTATCAGGTTC 58.256 40.000 4.23 0.00 36.85 3.62
3976 4205 6.723298 AGAGACATCGAATCTTATCAGGTT 57.277 37.500 4.23 0.00 0.00 3.50
3977 4206 6.723298 AAGAGACATCGAATCTTATCAGGT 57.277 37.500 4.23 0.00 31.63 4.00
3978 4207 6.073873 GCAAAGAGACATCGAATCTTATCAGG 60.074 42.308 4.23 0.00 33.05 3.86
3979 4208 6.700960 AGCAAAGAGACATCGAATCTTATCAG 59.299 38.462 4.23 0.00 33.05 2.90
3980 4209 6.577103 AGCAAAGAGACATCGAATCTTATCA 58.423 36.000 4.23 0.00 33.05 2.15
3981 4210 7.475771 AAGCAAAGAGACATCGAATCTTATC 57.524 36.000 4.23 1.96 33.05 1.75
3982 4211 9.553064 AATAAGCAAAGAGACATCGAATCTTAT 57.447 29.630 4.23 0.00 33.05 1.73
3983 4212 8.820933 CAATAAGCAAAGAGACATCGAATCTTA 58.179 33.333 4.23 0.00 33.05 2.10
3984 4213 7.335422 ACAATAAGCAAAGAGACATCGAATCTT 59.665 33.333 4.23 2.57 34.81 2.40
3985 4214 6.820656 ACAATAAGCAAAGAGACATCGAATCT 59.179 34.615 2.36 2.36 0.00 2.40
3986 4215 6.904011 CACAATAAGCAAAGAGACATCGAATC 59.096 38.462 0.00 0.00 0.00 2.52
3987 4216 6.676456 GCACAATAAGCAAAGAGACATCGAAT 60.676 38.462 0.00 0.00 0.00 3.34
3988 4217 5.390885 GCACAATAAGCAAAGAGACATCGAA 60.391 40.000 0.00 0.00 0.00 3.71
3989 4218 4.093408 GCACAATAAGCAAAGAGACATCGA 59.907 41.667 0.00 0.00 0.00 3.59
3990 4219 4.093998 AGCACAATAAGCAAAGAGACATCG 59.906 41.667 0.00 0.00 0.00 3.84
3991 4220 5.557891 AGCACAATAAGCAAAGAGACATC 57.442 39.130 0.00 0.00 0.00 3.06
3992 4221 6.176183 ACTAGCACAATAAGCAAAGAGACAT 58.824 36.000 0.00 0.00 0.00 3.06
3993 4222 5.551233 ACTAGCACAATAAGCAAAGAGACA 58.449 37.500 0.00 0.00 0.00 3.41
3994 4223 5.064071 GGACTAGCACAATAAGCAAAGAGAC 59.936 44.000 0.00 0.00 0.00 3.36
3995 4224 5.178797 GGACTAGCACAATAAGCAAAGAGA 58.821 41.667 0.00 0.00 0.00 3.10
3996 4225 4.333926 GGGACTAGCACAATAAGCAAAGAG 59.666 45.833 0.00 0.00 0.00 2.85
3997 4226 4.019321 AGGGACTAGCACAATAAGCAAAGA 60.019 41.667 0.00 0.00 36.02 2.52
3998 4227 4.095483 CAGGGACTAGCACAATAAGCAAAG 59.905 45.833 0.00 0.00 36.02 2.77
3999 4228 4.009675 CAGGGACTAGCACAATAAGCAAA 58.990 43.478 0.00 0.00 36.02 3.68
4000 4229 3.609853 CAGGGACTAGCACAATAAGCAA 58.390 45.455 0.00 0.00 36.02 3.91
4001 4230 2.092968 CCAGGGACTAGCACAATAAGCA 60.093 50.000 0.00 0.00 36.02 3.91
4002 4231 2.170607 TCCAGGGACTAGCACAATAAGC 59.829 50.000 0.00 0.00 36.02 3.09
4003 4232 4.696479 ATCCAGGGACTAGCACAATAAG 57.304 45.455 0.00 0.00 36.02 1.73
4004 4233 4.473196 TCAATCCAGGGACTAGCACAATAA 59.527 41.667 0.00 0.00 36.02 1.40
4005 4234 4.037222 TCAATCCAGGGACTAGCACAATA 58.963 43.478 0.00 0.00 36.02 1.90
4006 4235 2.846206 TCAATCCAGGGACTAGCACAAT 59.154 45.455 0.00 0.00 36.02 2.71
4007 4236 2.265367 TCAATCCAGGGACTAGCACAA 58.735 47.619 0.00 0.00 36.02 3.33
4008 4237 1.951209 TCAATCCAGGGACTAGCACA 58.049 50.000 0.00 0.00 36.02 4.57
4009 4238 3.471680 GATTCAATCCAGGGACTAGCAC 58.528 50.000 0.00 0.00 36.02 4.40
4010 4239 2.103094 CGATTCAATCCAGGGACTAGCA 59.897 50.000 0.00 0.00 36.02 3.49
4011 4240 2.760374 CGATTCAATCCAGGGACTAGC 58.240 52.381 0.00 0.00 36.02 3.42
4012 4241 2.366916 AGCGATTCAATCCAGGGACTAG 59.633 50.000 0.00 0.00 36.02 2.57
4013 4242 2.398588 AGCGATTCAATCCAGGGACTA 58.601 47.619 0.00 0.00 36.02 2.59
4014 4243 1.207791 AGCGATTCAATCCAGGGACT 58.792 50.000 0.00 0.00 43.88 3.85
4015 4244 2.760374 CTAGCGATTCAATCCAGGGAC 58.240 52.381 0.00 0.00 0.00 4.46
4016 4245 1.070758 GCTAGCGATTCAATCCAGGGA 59.929 52.381 0.00 0.00 0.00 4.20
4017 4246 1.202687 TGCTAGCGATTCAATCCAGGG 60.203 52.381 10.77 0.00 0.00 4.45
4018 4247 1.869767 GTGCTAGCGATTCAATCCAGG 59.130 52.381 10.77 0.00 0.00 4.45
4019 4248 2.286294 GTGTGCTAGCGATTCAATCCAG 59.714 50.000 10.77 0.00 0.00 3.86
4020 4249 2.279741 GTGTGCTAGCGATTCAATCCA 58.720 47.619 10.77 0.00 0.00 3.41
4021 4250 2.030946 GTGTGTGCTAGCGATTCAATCC 59.969 50.000 10.77 0.00 0.00 3.01
4022 4251 2.672874 TGTGTGTGCTAGCGATTCAATC 59.327 45.455 10.77 4.57 0.00 2.67
4023 4252 2.698803 TGTGTGTGCTAGCGATTCAAT 58.301 42.857 10.77 0.00 0.00 2.57
4024 4253 2.162319 TGTGTGTGCTAGCGATTCAA 57.838 45.000 10.77 0.00 0.00 2.69
4025 4254 2.162319 TTGTGTGTGCTAGCGATTCA 57.838 45.000 10.77 4.02 0.00 2.57
4026 4255 3.616821 TGTATTGTGTGTGCTAGCGATTC 59.383 43.478 10.77 1.29 0.00 2.52
4027 4256 3.595173 TGTATTGTGTGTGCTAGCGATT 58.405 40.909 10.77 0.00 0.00 3.34
4028 4257 3.245518 TGTATTGTGTGTGCTAGCGAT 57.754 42.857 10.77 0.00 0.00 4.58
4029 4258 2.734276 TGTATTGTGTGTGCTAGCGA 57.266 45.000 10.77 0.00 0.00 4.93
4030 4259 3.490896 CCTATGTATTGTGTGTGCTAGCG 59.509 47.826 10.77 0.00 0.00 4.26
4031 4260 4.693283 TCCTATGTATTGTGTGTGCTAGC 58.307 43.478 8.10 8.10 0.00 3.42
4032 4261 9.144747 GATATTCCTATGTATTGTGTGTGCTAG 57.855 37.037 0.00 0.00 0.00 3.42
4033 4262 8.646900 TGATATTCCTATGTATTGTGTGTGCTA 58.353 33.333 0.00 0.00 0.00 3.49
4034 4263 7.508687 TGATATTCCTATGTATTGTGTGTGCT 58.491 34.615 0.00 0.00 0.00 4.40
4035 4264 7.728847 TGATATTCCTATGTATTGTGTGTGC 57.271 36.000 0.00 0.00 0.00 4.57
4036 4265 9.330063 ACTTGATATTCCTATGTATTGTGTGTG 57.670 33.333 0.00 0.00 0.00 3.82
4045 4274 9.542462 GCACTTGTTACTTGATATTCCTATGTA 57.458 33.333 0.00 0.00 0.00 2.29
4046 4275 8.046708 TGCACTTGTTACTTGATATTCCTATGT 58.953 33.333 0.00 0.00 0.00 2.29
4047 4276 8.437360 TGCACTTGTTACTTGATATTCCTATG 57.563 34.615 0.00 0.00 0.00 2.23


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.