Multiple sequence alignment - TraesCS4D01G045200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G045200 chr4D 100.000 3253 0 0 1 3253 20541514 20538262 0.000000e+00 6008
1 TraesCS4D01G045200 chr4A 94.034 1056 48 8 758 1800 581147941 581148994 0.000000e+00 1587
2 TraesCS4D01G045200 chr4A 91.518 896 54 8 1864 2750 581149225 581150107 0.000000e+00 1214
3 TraesCS4D01G045200 chr4A 91.513 542 37 8 1 536 581147410 581147948 0.000000e+00 737
4 TraesCS4D01G045200 chr4A 98.438 64 1 0 1802 1865 581149047 581149110 2.650000e-21 113
5 TraesCS4D01G045200 chr4B 90.792 1010 46 21 823 1798 32491201 32490205 0.000000e+00 1306
6 TraesCS4D01G045200 chr4B 92.579 795 46 6 1958 2750 32488451 32487668 0.000000e+00 1129
7 TraesCS4D01G045200 chr4B 91.822 538 40 4 1 535 32492796 32492260 0.000000e+00 747
8 TraesCS4D01G045200 chr4B 87.546 546 41 13 1 535 32491818 32491289 9.980000e-170 606
9 TraesCS4D01G045200 chr4B 86.948 521 48 8 2245 2758 394813490 394813997 4.710000e-158 568
10 TraesCS4D01G045200 chr4B 87.229 462 39 8 2277 2731 549388913 549389361 2.900000e-140 508
11 TraesCS4D01G045200 chr4B 87.229 462 39 8 2277 2731 637162794 637163242 2.900000e-140 508
12 TraesCS4D01G045200 chr4B 84.848 297 25 8 2442 2731 94044222 94043939 6.870000e-72 281
13 TraesCS4D01G045200 chr4B 89.617 183 14 3 588 765 159546633 159546451 9.080000e-56 228
14 TraesCS4D01G045200 chr4B 90.722 97 4 2 1864 1959 32489995 32489903 1.230000e-24 124
15 TraesCS4D01G045200 chr4B 95.312 64 3 0 1802 1865 32490149 32490086 5.740000e-18 102
16 TraesCS4D01G045200 chr5B 88.632 563 44 10 2176 2731 540795292 540794743 0.000000e+00 667
17 TraesCS4D01G045200 chr2B 90.381 499 36 4 2176 2674 97328096 97328582 0.000000e+00 645
18 TraesCS4D01G045200 chr7B 87.792 557 48 8 2209 2758 205798648 205799191 4.580000e-178 634
19 TraesCS4D01G045200 chr7B 87.719 228 24 4 540 764 692342236 692342462 2.490000e-66 263
20 TraesCS4D01G045200 chr7B 87.054 224 25 3 538 758 82447170 82447392 1.940000e-62 250
21 TraesCS4D01G045200 chr6B 87.433 557 49 9 2209 2758 208793298 208793840 3.560000e-174 621
22 TraesCS4D01G045200 chr6B 87.879 462 36 8 2277 2731 177349754 177350202 2.880000e-145 525
23 TraesCS4D01G045200 chr6B 86.318 497 48 8 2269 2758 317343407 317342924 1.030000e-144 523
24 TraesCS4D01G045200 chr6B 87.662 462 37 8 2277 2731 677106183 677105735 1.340000e-143 520
25 TraesCS4D01G045200 chr3B 86.535 557 55 11 2209 2758 246890076 246889533 2.160000e-166 595
26 TraesCS4D01G045200 chr3B 88.889 153 10 6 513 661 240499698 240499549 7.170000e-42 182
27 TraesCS4D01G045200 chr1B 87.284 464 36 10 2277 2731 492594356 492593907 2.900000e-140 508
28 TraesCS4D01G045200 chr1B 86.040 351 28 9 2389 2731 15195334 15194997 1.110000e-94 357
29 TraesCS4D01G045200 chr1B 92.478 226 16 1 540 764 654237026 654236801 4.050000e-84 322
30 TraesCS4D01G045200 chr1B 84.512 297 26 8 2442 2731 603892764 603893047 3.200000e-70 276
31 TraesCS4D01G045200 chr2A 86.842 228 25 2 538 764 655281086 655281309 1.940000e-62 250
32 TraesCS4D01G045200 chr2A 86.170 188 20 4 580 765 750884551 750884734 7.120000e-47 198
33 TraesCS4D01G045200 chr5D 85.345 232 26 6 537 765 383236874 383237100 1.950000e-57 233
34 TraesCS4D01G045200 chr5D 84.507 213 27 3 553 764 488866704 488866911 4.250000e-49 206
35 TraesCS4D01G045200 chr2D 85.492 193 24 3 538 730 1639733 1639545 7.120000e-47 198


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G045200 chr4D 20538262 20541514 3252 True 6008.00 6008 100.000000 1 3253 1 chr4D.!!$R1 3252
1 TraesCS4D01G045200 chr4A 581147410 581150107 2697 False 912.75 1587 93.875750 1 2750 4 chr4A.!!$F1 2749
2 TraesCS4D01G045200 chr4B 32487668 32492796 5128 True 669.00 1306 91.462167 1 2750 6 chr4B.!!$R3 2749
3 TraesCS4D01G045200 chr4B 394813490 394813997 507 False 568.00 568 86.948000 2245 2758 1 chr4B.!!$F1 513
4 TraesCS4D01G045200 chr5B 540794743 540795292 549 True 667.00 667 88.632000 2176 2731 1 chr5B.!!$R1 555
5 TraesCS4D01G045200 chr7B 205798648 205799191 543 False 634.00 634 87.792000 2209 2758 1 chr7B.!!$F2 549
6 TraesCS4D01G045200 chr6B 208793298 208793840 542 False 621.00 621 87.433000 2209 2758 1 chr6B.!!$F2 549
7 TraesCS4D01G045200 chr3B 246889533 246890076 543 True 595.00 595 86.535000 2209 2758 1 chr3B.!!$R2 549

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
727 733 0.032130 AGGGTGAGTATATGCGCGTG 59.968 55.0 13.61 0.0 0.00 5.34 F
741 747 0.159554 CGCGTGTATATGAGCGCTTG 59.840 55.0 13.26 0.0 46.56 4.01 F
1420 2446 0.172578 TACTTCGCGCTGTAGCACAT 59.827 50.0 5.56 0.0 42.21 3.21 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2068 4733 0.457035 AGCAACCAACTGCACAAGTG 59.543 50.0 0.0 0.0 45.18 3.16 R
2167 4832 0.614979 CTCTTCGGGGAACTCCTGGA 60.615 60.0 0.0 0.0 42.31 3.86 R
3158 5837 1.479709 ACTTGCAGTAGATCGAGCCT 58.520 50.0 0.0 0.0 0.00 4.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 3.367703 GGTTGAAGCCACAATGGATCAAG 60.368 47.826 13.61 0.00 41.94 3.02
56 57 4.263639 ACAATGGATCAAGCTTCTTCTCCA 60.264 41.667 14.71 14.71 37.21 3.86
67 68 2.638480 TCTTCTCCACTTGTGGTTGG 57.362 50.000 18.05 10.52 0.00 3.77
137 138 7.907389 ACATTCAGAGACCTACTTTTCATACA 58.093 34.615 0.00 0.00 0.00 2.29
165 166 6.195600 ACCTATCTTTGTCCAAAGGTGTTA 57.804 37.500 17.25 1.22 45.80 2.41
167 168 5.414765 CCTATCTTTGTCCAAAGGTGTTACC 59.585 44.000 17.25 0.00 45.80 2.85
177 178 0.035439 AGGTGTTACCGCCAAGGATG 60.035 55.000 0.00 0.00 44.90 3.51
189 190 2.494870 GCCAAGGATGACAATTCTGCTT 59.505 45.455 0.00 0.00 0.00 3.91
208 209 3.370061 GCTTGTACTCGTTGGGACATTAC 59.630 47.826 0.00 0.00 39.30 1.89
320 321 4.666512 ACTGTGCTCATTGGGTTCTAAAT 58.333 39.130 0.00 0.00 0.00 1.40
326 329 7.013274 TGTGCTCATTGGGTTCTAAATATAAGC 59.987 37.037 0.00 0.00 0.00 3.09
327 330 7.013274 GTGCTCATTGGGTTCTAAATATAAGCA 59.987 37.037 0.00 0.00 0.00 3.91
396 399 1.135402 CAACTTTAGCCGCATTCCCAC 60.135 52.381 0.00 0.00 0.00 4.61
425 428 2.235016 TGCCCAGGTGTTGTTATTCAC 58.765 47.619 0.00 0.00 0.00 3.18
434 437 6.004408 GGTGTTGTTATTCACCGTTGTAAT 57.996 37.500 0.00 0.00 43.34 1.89
491 494 1.809684 GTGCACCTCCCTCTTGTTAC 58.190 55.000 5.22 0.00 0.00 2.50
549 555 2.524569 AAAAAGGGCGAACCAACATG 57.475 45.000 0.00 0.00 43.89 3.21
550 556 1.408969 AAAAGGGCGAACCAACATGT 58.591 45.000 0.00 0.00 43.89 3.21
551 557 0.673437 AAAGGGCGAACCAACATGTG 59.327 50.000 0.00 0.00 43.89 3.21
568 574 5.745227 ACATGTGGTTGGATAGTTAGAAGG 58.255 41.667 0.00 0.00 0.00 3.46
569 575 5.487488 ACATGTGGTTGGATAGTTAGAAGGA 59.513 40.000 0.00 0.00 0.00 3.36
570 576 5.416271 TGTGGTTGGATAGTTAGAAGGAC 57.584 43.478 0.00 0.00 0.00 3.85
571 577 5.091552 TGTGGTTGGATAGTTAGAAGGACT 58.908 41.667 0.00 0.00 0.00 3.85
572 578 5.046591 TGTGGTTGGATAGTTAGAAGGACTG 60.047 44.000 0.00 0.00 0.00 3.51
573 579 5.046520 GTGGTTGGATAGTTAGAAGGACTGT 60.047 44.000 0.00 0.00 0.00 3.55
574 580 5.046591 TGGTTGGATAGTTAGAAGGACTGTG 60.047 44.000 0.00 0.00 0.00 3.66
575 581 5.420409 GTTGGATAGTTAGAAGGACTGTGG 58.580 45.833 0.00 0.00 0.00 4.17
576 582 4.684724 TGGATAGTTAGAAGGACTGTGGT 58.315 43.478 0.00 0.00 0.00 4.16
577 583 5.834460 TGGATAGTTAGAAGGACTGTGGTA 58.166 41.667 0.00 0.00 0.00 3.25
578 584 6.441222 TGGATAGTTAGAAGGACTGTGGTAT 58.559 40.000 0.00 0.00 0.00 2.73
579 585 6.901300 TGGATAGTTAGAAGGACTGTGGTATT 59.099 38.462 0.00 0.00 0.00 1.89
580 586 7.069578 TGGATAGTTAGAAGGACTGTGGTATTC 59.930 40.741 0.00 0.00 0.00 1.75
581 587 7.288158 GGATAGTTAGAAGGACTGTGGTATTCT 59.712 40.741 0.00 0.00 36.33 2.40
582 588 6.532988 AGTTAGAAGGACTGTGGTATTCTC 57.467 41.667 0.00 0.00 35.01 2.87
583 589 6.017192 AGTTAGAAGGACTGTGGTATTCTCA 58.983 40.000 0.00 0.00 35.01 3.27
584 590 6.153680 AGTTAGAAGGACTGTGGTATTCTCAG 59.846 42.308 0.00 0.00 35.01 3.35
585 591 3.196685 AGAAGGACTGTGGTATTCTCAGC 59.803 47.826 0.00 0.00 30.52 4.26
586 592 1.834263 AGGACTGTGGTATTCTCAGCC 59.166 52.381 0.00 0.00 33.12 4.85
587 593 1.134371 GGACTGTGGTATTCTCAGCCC 60.134 57.143 0.00 0.00 33.12 5.19
588 594 1.555075 GACTGTGGTATTCTCAGCCCA 59.445 52.381 0.00 0.00 33.12 5.36
589 595 1.279271 ACTGTGGTATTCTCAGCCCAC 59.721 52.381 0.00 0.00 46.04 4.61
590 596 0.618458 TGTGGTATTCTCAGCCCACC 59.382 55.000 5.31 0.00 45.41 4.61
591 597 0.618458 GTGGTATTCTCAGCCCACCA 59.382 55.000 0.00 0.00 41.20 4.17
592 598 0.911769 TGGTATTCTCAGCCCACCAG 59.088 55.000 0.00 0.00 34.40 4.00
593 599 0.181350 GGTATTCTCAGCCCACCAGG 59.819 60.000 0.00 0.00 39.47 4.45
603 609 4.821935 CCACCAGGGTTCAAGTCC 57.178 61.111 0.00 0.00 0.00 3.85
604 610 2.155065 CCACCAGGGTTCAAGTCCT 58.845 57.895 0.00 0.00 0.00 3.85
608 614 3.329300 CAGGGTTCAAGTCCTGGTG 57.671 57.895 0.00 0.00 44.99 4.17
609 615 0.890996 CAGGGTTCAAGTCCTGGTGC 60.891 60.000 0.00 0.00 44.99 5.01
610 616 1.062488 AGGGTTCAAGTCCTGGTGCT 61.062 55.000 0.00 0.00 31.11 4.40
611 617 0.606673 GGGTTCAAGTCCTGGTGCTC 60.607 60.000 0.00 0.00 0.00 4.26
612 618 0.951040 GGTTCAAGTCCTGGTGCTCG 60.951 60.000 0.00 0.00 0.00 5.03
613 619 1.301716 TTCAAGTCCTGGTGCTCGC 60.302 57.895 0.00 0.00 0.00 5.03
614 620 2.031012 CAAGTCCTGGTGCTCGCA 59.969 61.111 0.00 0.00 0.00 5.10
615 621 1.376424 CAAGTCCTGGTGCTCGCAT 60.376 57.895 0.00 0.00 0.00 4.73
616 622 0.957395 CAAGTCCTGGTGCTCGCATT 60.957 55.000 0.00 0.00 0.00 3.56
617 623 0.250901 AAGTCCTGGTGCTCGCATTT 60.251 50.000 0.00 0.00 0.00 2.32
618 624 0.613260 AGTCCTGGTGCTCGCATTTA 59.387 50.000 0.00 0.00 0.00 1.40
619 625 1.210478 AGTCCTGGTGCTCGCATTTAT 59.790 47.619 0.00 0.00 0.00 1.40
620 626 2.017049 GTCCTGGTGCTCGCATTTATT 58.983 47.619 0.00 0.00 0.00 1.40
621 627 2.032178 GTCCTGGTGCTCGCATTTATTC 59.968 50.000 0.00 0.00 0.00 1.75
622 628 1.334869 CCTGGTGCTCGCATTTATTCC 59.665 52.381 0.00 0.00 0.00 3.01
623 629 2.292267 CTGGTGCTCGCATTTATTCCT 58.708 47.619 0.00 0.00 0.00 3.36
624 630 2.016318 TGGTGCTCGCATTTATTCCTG 58.984 47.619 0.00 0.00 0.00 3.86
625 631 1.334869 GGTGCTCGCATTTATTCCTGG 59.665 52.381 0.00 0.00 0.00 4.45
626 632 2.288666 GTGCTCGCATTTATTCCTGGA 58.711 47.619 0.00 0.00 0.00 3.86
627 633 2.880890 GTGCTCGCATTTATTCCTGGAT 59.119 45.455 0.00 0.00 0.00 3.41
628 634 3.316308 GTGCTCGCATTTATTCCTGGATT 59.684 43.478 0.00 0.00 0.00 3.01
629 635 3.953612 TGCTCGCATTTATTCCTGGATTT 59.046 39.130 0.00 0.00 0.00 2.17
630 636 5.008613 GTGCTCGCATTTATTCCTGGATTTA 59.991 40.000 0.00 0.00 0.00 1.40
631 637 5.769662 TGCTCGCATTTATTCCTGGATTTAT 59.230 36.000 0.00 0.00 0.00 1.40
632 638 6.265196 TGCTCGCATTTATTCCTGGATTTATT 59.735 34.615 0.00 0.00 0.00 1.40
633 639 7.147976 GCTCGCATTTATTCCTGGATTTATTT 58.852 34.615 0.00 0.00 0.00 1.40
634 640 7.327032 GCTCGCATTTATTCCTGGATTTATTTC 59.673 37.037 0.00 0.00 0.00 2.17
635 641 8.231692 TCGCATTTATTCCTGGATTTATTTCA 57.768 30.769 0.00 0.00 0.00 2.69
636 642 8.352201 TCGCATTTATTCCTGGATTTATTTCAG 58.648 33.333 0.00 0.00 0.00 3.02
637 643 7.596248 CGCATTTATTCCTGGATTTATTTCAGG 59.404 37.037 0.00 0.00 46.91 3.86
646 652 6.469782 TGGATTTATTTCAGGATTTCTGGC 57.530 37.500 0.00 0.00 43.53 4.85
647 653 5.067674 TGGATTTATTTCAGGATTTCTGGCG 59.932 40.000 0.00 0.00 43.53 5.69
648 654 5.299279 GGATTTATTTCAGGATTTCTGGCGA 59.701 40.000 0.00 0.00 43.53 5.54
649 655 6.015940 GGATTTATTTCAGGATTTCTGGCGAT 60.016 38.462 0.00 0.00 43.53 4.58
650 656 5.756195 TTATTTCAGGATTTCTGGCGATG 57.244 39.130 0.00 0.00 43.53 3.84
651 657 1.382522 TTCAGGATTTCTGGCGATGC 58.617 50.000 0.00 0.00 43.53 3.91
652 658 0.252761 TCAGGATTTCTGGCGATGCA 59.747 50.000 0.00 0.00 43.53 3.96
653 659 0.379669 CAGGATTTCTGGCGATGCAC 59.620 55.000 0.00 0.00 39.76 4.57
654 660 0.035152 AGGATTTCTGGCGATGCACA 60.035 50.000 0.00 0.00 0.00 4.57
655 661 1.027357 GGATTTCTGGCGATGCACAT 58.973 50.000 0.00 0.00 0.00 3.21
656 662 1.406539 GGATTTCTGGCGATGCACATT 59.593 47.619 0.00 0.00 0.00 2.71
657 663 2.542411 GGATTTCTGGCGATGCACATTC 60.542 50.000 0.00 0.00 0.00 2.67
658 664 1.532523 TTTCTGGCGATGCACATTCA 58.467 45.000 0.00 0.00 0.00 2.57
659 665 1.089112 TTCTGGCGATGCACATTCAG 58.911 50.000 0.00 0.00 0.00 3.02
660 666 0.036105 TCTGGCGATGCACATTCAGT 60.036 50.000 0.00 0.00 0.00 3.41
661 667 0.376152 CTGGCGATGCACATTCAGTC 59.624 55.000 0.00 0.00 0.00 3.51
662 668 0.036105 TGGCGATGCACATTCAGTCT 60.036 50.000 0.00 0.00 0.00 3.24
663 669 1.089920 GGCGATGCACATTCAGTCTT 58.910 50.000 0.00 0.00 0.00 3.01
664 670 1.470098 GGCGATGCACATTCAGTCTTT 59.530 47.619 0.00 0.00 0.00 2.52
665 671 2.476854 GGCGATGCACATTCAGTCTTTC 60.477 50.000 0.00 0.00 0.00 2.62
666 672 2.785681 GCGATGCACATTCAGTCTTTCG 60.786 50.000 0.00 0.00 0.00 3.46
667 673 2.222886 CGATGCACATTCAGTCTTTCGG 60.223 50.000 0.00 0.00 0.00 4.30
668 674 2.542020 TGCACATTCAGTCTTTCGGA 57.458 45.000 0.00 0.00 0.00 4.55
669 675 2.416747 TGCACATTCAGTCTTTCGGAG 58.583 47.619 0.00 0.00 0.00 4.63
670 676 1.734465 GCACATTCAGTCTTTCGGAGG 59.266 52.381 0.00 0.00 0.00 4.30
671 677 2.872038 GCACATTCAGTCTTTCGGAGGT 60.872 50.000 0.00 0.00 0.00 3.85
672 678 2.738846 CACATTCAGTCTTTCGGAGGTG 59.261 50.000 0.00 0.00 0.00 4.00
673 679 1.734465 CATTCAGTCTTTCGGAGGTGC 59.266 52.381 0.00 0.00 0.00 5.01
674 680 1.048601 TTCAGTCTTTCGGAGGTGCT 58.951 50.000 0.00 0.00 0.00 4.40
675 681 0.603569 TCAGTCTTTCGGAGGTGCTC 59.396 55.000 0.00 0.00 0.00 4.26
676 682 0.318441 CAGTCTTTCGGAGGTGCTCA 59.682 55.000 0.00 0.00 31.08 4.26
677 683 1.066573 CAGTCTTTCGGAGGTGCTCAT 60.067 52.381 0.00 0.00 31.08 2.90
678 684 2.166459 CAGTCTTTCGGAGGTGCTCATA 59.834 50.000 0.00 0.00 31.08 2.15
679 685 2.428890 AGTCTTTCGGAGGTGCTCATAG 59.571 50.000 0.00 0.00 31.08 2.23
680 686 1.757118 TCTTTCGGAGGTGCTCATAGG 59.243 52.381 0.00 0.00 31.08 2.57
681 687 0.830648 TTTCGGAGGTGCTCATAGGG 59.169 55.000 0.00 0.00 31.08 3.53
682 688 1.048724 TTCGGAGGTGCTCATAGGGG 61.049 60.000 0.00 0.00 31.08 4.79
683 689 1.762460 CGGAGGTGCTCATAGGGGT 60.762 63.158 0.00 0.00 31.08 4.95
684 690 0.469331 CGGAGGTGCTCATAGGGGTA 60.469 60.000 0.00 0.00 31.08 3.69
685 691 1.343069 GGAGGTGCTCATAGGGGTAG 58.657 60.000 0.00 0.00 31.08 3.18
686 692 1.343069 GAGGTGCTCATAGGGGTAGG 58.657 60.000 0.00 0.00 0.00 3.18
687 693 0.104934 AGGTGCTCATAGGGGTAGGG 60.105 60.000 0.00 0.00 0.00 3.53
688 694 0.400093 GGTGCTCATAGGGGTAGGGT 60.400 60.000 0.00 0.00 0.00 4.34
689 695 0.759346 GTGCTCATAGGGGTAGGGTG 59.241 60.000 0.00 0.00 0.00 4.61
690 696 0.341961 TGCTCATAGGGGTAGGGTGT 59.658 55.000 0.00 0.00 0.00 4.16
691 697 0.759346 GCTCATAGGGGTAGGGTGTG 59.241 60.000 0.00 0.00 0.00 3.82
692 698 0.759346 CTCATAGGGGTAGGGTGTGC 59.241 60.000 0.00 0.00 0.00 4.57
693 699 1.046472 TCATAGGGGTAGGGTGTGCG 61.046 60.000 0.00 0.00 0.00 5.34
694 700 1.002533 ATAGGGGTAGGGTGTGCGT 59.997 57.895 0.00 0.00 0.00 5.24
695 701 0.262580 ATAGGGGTAGGGTGTGCGTA 59.737 55.000 0.00 0.00 0.00 4.42
696 702 0.262580 TAGGGGTAGGGTGTGCGTAT 59.737 55.000 0.00 0.00 0.00 3.06
697 703 1.145377 GGGGTAGGGTGTGCGTATG 59.855 63.158 0.00 0.00 0.00 2.39
698 704 1.619807 GGGGTAGGGTGTGCGTATGT 61.620 60.000 0.00 0.00 0.00 2.29
699 705 1.113788 GGGTAGGGTGTGCGTATGTA 58.886 55.000 0.00 0.00 0.00 2.29
700 706 1.202452 GGGTAGGGTGTGCGTATGTAC 60.202 57.143 0.00 0.00 0.00 2.90
714 720 4.923893 CGTATGTACGTTCATAAGGGTGA 58.076 43.478 15.39 0.00 44.13 4.02
715 721 4.974275 CGTATGTACGTTCATAAGGGTGAG 59.026 45.833 15.39 0.53 44.13 3.51
716 722 5.449588 CGTATGTACGTTCATAAGGGTGAGT 60.450 44.000 15.39 0.00 44.13 3.41
717 723 6.238456 CGTATGTACGTTCATAAGGGTGAGTA 60.238 42.308 15.39 0.00 44.13 2.59
718 724 6.726490 ATGTACGTTCATAAGGGTGAGTAT 57.274 37.500 5.81 0.00 0.00 2.12
719 725 7.828508 ATGTACGTTCATAAGGGTGAGTATA 57.171 36.000 5.81 0.00 0.00 1.47
720 726 7.828508 TGTACGTTCATAAGGGTGAGTATAT 57.171 36.000 0.00 0.00 0.00 0.86
721 727 7.654568 TGTACGTTCATAAGGGTGAGTATATG 58.345 38.462 0.00 0.00 0.00 1.78
722 728 5.539048 ACGTTCATAAGGGTGAGTATATGC 58.461 41.667 0.00 0.00 0.00 3.14
723 729 4.621460 CGTTCATAAGGGTGAGTATATGCG 59.379 45.833 0.00 0.00 0.00 4.73
724 730 4.188247 TCATAAGGGTGAGTATATGCGC 57.812 45.455 0.00 0.00 0.00 6.09
725 731 2.717580 TAAGGGTGAGTATATGCGCG 57.282 50.000 0.00 0.00 0.00 6.86
726 732 0.750850 AAGGGTGAGTATATGCGCGT 59.249 50.000 8.43 7.55 0.00 6.01
727 733 0.032130 AGGGTGAGTATATGCGCGTG 59.968 55.000 13.61 0.00 0.00 5.34
728 734 0.249322 GGGTGAGTATATGCGCGTGT 60.249 55.000 13.61 8.52 0.00 4.49
729 735 1.001048 GGGTGAGTATATGCGCGTGTA 60.001 52.381 13.61 7.27 0.00 2.90
730 736 2.352421 GGGTGAGTATATGCGCGTGTAT 60.352 50.000 13.61 9.22 0.00 2.29
731 737 3.119743 GGGTGAGTATATGCGCGTGTATA 60.120 47.826 13.61 9.23 0.00 1.47
732 738 4.439700 GGGTGAGTATATGCGCGTGTATAT 60.440 45.833 20.79 20.79 37.23 0.86
733 739 4.499399 GGTGAGTATATGCGCGTGTATATG 59.501 45.833 24.28 0.00 34.71 1.78
734 740 5.329493 GTGAGTATATGCGCGTGTATATGA 58.671 41.667 24.28 9.82 34.71 2.15
735 741 5.452623 GTGAGTATATGCGCGTGTATATGAG 59.547 44.000 24.28 0.00 34.71 2.90
736 742 4.352039 AGTATATGCGCGTGTATATGAGC 58.648 43.478 24.28 15.73 38.85 4.26
739 745 4.228451 CGCGTGTATATGAGCGCT 57.772 55.556 11.27 11.27 46.56 5.92
740 746 2.506544 CGCGTGTATATGAGCGCTT 58.493 52.632 13.26 0.00 46.56 4.68
741 747 0.159554 CGCGTGTATATGAGCGCTTG 59.840 55.000 13.26 0.00 46.56 4.01
742 748 1.209128 GCGTGTATATGAGCGCTTGT 58.791 50.000 13.26 5.98 45.48 3.16
743 749 1.071239 GCGTGTATATGAGCGCTTGTG 60.071 52.381 13.26 0.00 45.48 3.33
744 750 2.193447 CGTGTATATGAGCGCTTGTGT 58.807 47.619 13.26 4.27 0.00 3.72
745 751 2.216488 CGTGTATATGAGCGCTTGTGTC 59.784 50.000 13.26 0.00 0.00 3.67
746 752 3.448686 GTGTATATGAGCGCTTGTGTCT 58.551 45.455 13.26 0.00 0.00 3.41
747 753 3.243877 GTGTATATGAGCGCTTGTGTCTG 59.756 47.826 13.26 0.00 0.00 3.51
748 754 2.680312 ATATGAGCGCTTGTGTCTGT 57.320 45.000 13.26 0.00 0.00 3.41
749 755 3.801114 ATATGAGCGCTTGTGTCTGTA 57.199 42.857 13.26 0.00 0.00 2.74
750 756 1.714794 ATGAGCGCTTGTGTCTGTAC 58.285 50.000 13.26 0.00 0.00 2.90
751 757 0.673985 TGAGCGCTTGTGTCTGTACT 59.326 50.000 13.26 0.00 0.00 2.73
752 758 1.063806 GAGCGCTTGTGTCTGTACTG 58.936 55.000 13.26 0.00 0.00 2.74
753 759 0.389391 AGCGCTTGTGTCTGTACTGT 59.611 50.000 2.64 0.00 0.00 3.55
754 760 1.611977 AGCGCTTGTGTCTGTACTGTA 59.388 47.619 2.64 0.00 0.00 2.74
755 761 2.231478 AGCGCTTGTGTCTGTACTGTAT 59.769 45.455 2.64 0.00 0.00 2.29
756 762 2.993899 GCGCTTGTGTCTGTACTGTATT 59.006 45.455 0.00 0.00 0.00 1.89
757 763 4.082408 AGCGCTTGTGTCTGTACTGTATTA 60.082 41.667 2.64 0.00 0.00 0.98
758 764 4.624024 GCGCTTGTGTCTGTACTGTATTAA 59.376 41.667 0.00 0.00 0.00 1.40
759 765 5.119588 GCGCTTGTGTCTGTACTGTATTAAA 59.880 40.000 0.00 0.00 0.00 1.52
760 766 6.347079 GCGCTTGTGTCTGTACTGTATTAAAA 60.347 38.462 0.00 0.00 0.00 1.52
761 767 7.569297 CGCTTGTGTCTGTACTGTATTAAAAA 58.431 34.615 0.00 0.00 0.00 1.94
781 787 4.674281 AAAAGTAATCTCGCCCCTCTAG 57.326 45.455 0.00 0.00 0.00 2.43
808 814 5.872617 GGGGTAAAACAAAAATGACCTATGC 59.127 40.000 0.00 0.00 0.00 3.14
811 817 2.542766 ACAAAAATGACCTATGCGCG 57.457 45.000 0.00 0.00 0.00 6.86
831 1827 5.164022 GCGCGTGTAAATACTTCACTTAACT 60.164 40.000 8.43 0.00 0.00 2.24
832 1828 6.231365 CGCGTGTAAATACTTCACTTAACTG 58.769 40.000 0.00 0.00 0.00 3.16
848 1851 6.756542 CACTTAACTGAAAAACAAAAGGGGAG 59.243 38.462 0.00 0.00 0.00 4.30
849 1852 6.666113 ACTTAACTGAAAAACAAAAGGGGAGA 59.334 34.615 0.00 0.00 0.00 3.71
850 1853 5.598416 AACTGAAAAACAAAAGGGGAGAG 57.402 39.130 0.00 0.00 0.00 3.20
852 1855 4.215109 CTGAAAAACAAAAGGGGAGAGGA 58.785 43.478 0.00 0.00 0.00 3.71
853 1856 4.615513 TGAAAAACAAAAGGGGAGAGGAA 58.384 39.130 0.00 0.00 0.00 3.36
854 1857 5.026790 TGAAAAACAAAAGGGGAGAGGAAA 58.973 37.500 0.00 0.00 0.00 3.13
855 1858 5.485708 TGAAAAACAAAAGGGGAGAGGAAAA 59.514 36.000 0.00 0.00 0.00 2.29
856 1859 6.157820 TGAAAAACAAAAGGGGAGAGGAAAAT 59.842 34.615 0.00 0.00 0.00 1.82
1406 2432 2.969262 CCTCCTCCTCCTCCATTACTTC 59.031 54.545 0.00 0.00 0.00 3.01
1420 2446 0.172578 TACTTCGCGCTGTAGCACAT 59.827 50.000 5.56 0.00 42.21 3.21
1458 2490 8.435982 AGGATCTGAATATAGTTTCTCAAAGGG 58.564 37.037 0.00 0.00 0.00 3.95
1459 2491 7.663493 GGATCTGAATATAGTTTCTCAAAGGGG 59.337 40.741 0.00 0.00 0.00 4.79
1464 2496 9.408648 TGAATATAGTTTCTCAAAGGGGAAATC 57.591 33.333 0.00 0.00 34.60 2.17
1482 2514 7.366513 GGGAAATCTTCAGTTTTTCTTGAGAG 58.633 38.462 0.00 0.00 31.57 3.20
1524 2556 4.261801 GGTTTGCAGTGGAATAGCTCTAA 58.738 43.478 0.00 0.00 0.00 2.10
1537 2569 8.730680 TGGAATAGCTCTAAGTTGAAATGTTTC 58.269 33.333 0.00 0.00 37.69 2.78
1686 2721 5.133221 AGGGCTCCATGTTCATGTTATAAC 58.867 41.667 8.75 8.75 0.00 1.89
1700 2735 8.771920 TCATGTTATAACCACTCTTTGTAGTG 57.228 34.615 13.01 0.00 45.33 2.74
1718 2753 3.594134 AGTGCACTGAGCTACTGAATTC 58.406 45.455 20.97 0.00 45.94 2.17
1729 2764 6.596888 TGAGCTACTGAATTCTTTTCCTCATG 59.403 38.462 7.05 0.00 0.00 3.07
1759 2794 6.239402 CCAAAAGAGTGAATCCTTTCCAATGT 60.239 38.462 0.00 0.00 32.01 2.71
1770 2812 6.042638 TCCTTTCCAATGTCTAGAACTCTG 57.957 41.667 0.00 0.00 0.00 3.35
1779 2821 4.408276 TGTCTAGAACTCTGCTGGTACTT 58.592 43.478 0.00 0.00 0.00 2.24
1780 2822 4.218635 TGTCTAGAACTCTGCTGGTACTTG 59.781 45.833 0.00 0.00 0.00 3.16
1781 2823 4.218852 GTCTAGAACTCTGCTGGTACTTGT 59.781 45.833 0.00 0.00 0.00 3.16
1782 2824 4.833380 TCTAGAACTCTGCTGGTACTTGTT 59.167 41.667 0.00 0.00 0.00 2.83
1832 2927 7.917505 AGCTATTTATTTACATTTGCTGACTGC 59.082 33.333 0.00 0.00 43.25 4.40
1866 2961 9.989869 GAGATAATTTACCACTTCTTTGTTAGC 57.010 33.333 0.00 0.00 0.00 3.09
1877 3088 6.580041 CACTTCTTTGTTAGCTTACATTGCTG 59.420 38.462 6.36 1.00 41.32 4.41
1878 3089 5.627499 TCTTTGTTAGCTTACATTGCTGG 57.373 39.130 6.36 0.00 41.32 4.85
1879 3090 3.848272 TTGTTAGCTTACATTGCTGGC 57.152 42.857 6.36 0.00 41.32 4.85
1891 3103 2.877097 TTGCTGGCTAACATTCCTGA 57.123 45.000 0.00 0.00 0.00 3.86
1892 3104 2.113860 TGCTGGCTAACATTCCTGAC 57.886 50.000 0.00 0.00 0.00 3.51
1893 3105 1.340017 TGCTGGCTAACATTCCTGACC 60.340 52.381 0.00 0.00 0.00 4.02
1894 3106 1.065126 GCTGGCTAACATTCCTGACCT 60.065 52.381 0.00 0.00 0.00 3.85
1966 4631 9.295825 AGATGTCCACTCAATAAGTAGAGATAG 57.704 37.037 0.00 0.00 31.31 2.08
2031 4696 8.837099 TCCATCCATTTAACCATGTTAATTCT 57.163 30.769 0.69 0.00 0.00 2.40
2037 4702 7.980662 CCATTTAACCATGTTAATTCTCATGCA 59.019 33.333 13.80 0.00 39.74 3.96
2044 4709 6.700081 CCATGTTAATTCTCATGCAATGGAAG 59.300 38.462 13.80 0.00 46.73 3.46
2046 4711 7.936496 TGTTAATTCTCATGCAATGGAAGTA 57.064 32.000 0.00 0.00 46.73 2.24
2052 4717 9.729281 AATTCTCATGCAATGGAAGTAATTTTT 57.271 25.926 0.00 0.00 46.73 1.94
2090 4755 0.459934 TTGTGCAGTTGGTTGCTTGC 60.460 50.000 0.00 0.00 44.38 4.01
2167 4832 4.898861 TGCTTTTAAGGAATCAACCCAAGT 59.101 37.500 0.00 0.00 0.00 3.16
2311 4976 3.235200 TCTCTCTTTGAGCTATAGGGCC 58.765 50.000 0.00 0.00 42.38 5.80
2350 5015 6.377327 AACTTGTACAACATTCAGTGGAAG 57.623 37.500 3.59 0.00 36.25 3.46
2355 5020 2.035066 ACAACATTCAGTGGAAGCTTGC 59.965 45.455 11.58 11.58 36.25 4.01
2390 5055 1.003464 GGAAATTGGCTGCCATGGTTT 59.997 47.619 24.03 21.62 31.53 3.27
2407 5072 4.877282 TGGTTTGGAAAAGGAAATTAGCG 58.123 39.130 0.00 0.00 0.00 4.26
2509 5174 8.566260 GTGATGAAATTCAGCTATGCTTCTATT 58.434 33.333 12.62 0.00 36.40 1.73
2666 5339 7.536159 TCACATATCTCATTCTGCTCTGTAT 57.464 36.000 0.00 0.00 0.00 2.29
2674 5347 7.164122 TCTCATTCTGCTCTGTATTGAACTTT 58.836 34.615 0.00 0.00 0.00 2.66
2750 5429 4.152759 TGATTCGATTCAACCAACGGTTAC 59.847 41.667 7.52 0.00 45.01 2.50
2753 5432 2.096119 CGATTCAACCAACGGTTACCAC 60.096 50.000 1.13 0.00 45.01 4.16
2758 5437 4.317488 TCAACCAACGGTTACCACTTATC 58.683 43.478 1.13 0.00 45.01 1.75
2759 5438 3.339253 ACCAACGGTTACCACTTATCC 57.661 47.619 1.13 0.00 27.29 2.59
2760 5439 2.273557 CCAACGGTTACCACTTATCCG 58.726 52.381 1.13 0.00 45.24 4.18
2764 5443 3.075866 CGGTTACCACTTATCCGTCTC 57.924 52.381 1.13 0.00 37.99 3.36
2765 5444 2.424601 CGGTTACCACTTATCCGTCTCA 59.575 50.000 1.13 0.00 37.99 3.27
2766 5445 3.733077 CGGTTACCACTTATCCGTCTCAC 60.733 52.174 1.13 0.00 37.99 3.51
2767 5446 3.446516 GGTTACCACTTATCCGTCTCACT 59.553 47.826 0.00 0.00 0.00 3.41
2768 5447 4.641989 GGTTACCACTTATCCGTCTCACTA 59.358 45.833 0.00 0.00 0.00 2.74
2769 5448 5.126061 GGTTACCACTTATCCGTCTCACTAA 59.874 44.000 0.00 0.00 0.00 2.24
2770 5449 6.183360 GGTTACCACTTATCCGTCTCACTAAT 60.183 42.308 0.00 0.00 0.00 1.73
2771 5450 5.934402 ACCACTTATCCGTCTCACTAATT 57.066 39.130 0.00 0.00 0.00 1.40
2772 5451 6.295719 ACCACTTATCCGTCTCACTAATTT 57.704 37.500 0.00 0.00 0.00 1.82
2773 5452 6.708285 ACCACTTATCCGTCTCACTAATTTT 58.292 36.000 0.00 0.00 0.00 1.82
2774 5453 7.166167 ACCACTTATCCGTCTCACTAATTTTT 58.834 34.615 0.00 0.00 0.00 1.94
2775 5454 8.316214 ACCACTTATCCGTCTCACTAATTTTTA 58.684 33.333 0.00 0.00 0.00 1.52
2776 5455 9.326413 CCACTTATCCGTCTCACTAATTTTTAT 57.674 33.333 0.00 0.00 0.00 1.40
2778 5457 8.827677 ACTTATCCGTCTCACTAATTTTTATGC 58.172 33.333 0.00 0.00 0.00 3.14
2779 5458 8.958119 TTATCCGTCTCACTAATTTTTATGCT 57.042 30.769 0.00 0.00 0.00 3.79
2780 5459 7.865706 ATCCGTCTCACTAATTTTTATGCTT 57.134 32.000 0.00 0.00 0.00 3.91
2781 5460 8.958119 ATCCGTCTCACTAATTTTTATGCTTA 57.042 30.769 0.00 0.00 0.00 3.09
2782 5461 8.958119 TCCGTCTCACTAATTTTTATGCTTAT 57.042 30.769 0.00 0.00 0.00 1.73
2816 5495 7.712264 CAAGAACTTTTTGCATTCATACCAA 57.288 32.000 0.00 0.00 0.00 3.67
2817 5496 8.314143 CAAGAACTTTTTGCATTCATACCAAT 57.686 30.769 0.00 0.00 0.00 3.16
2818 5497 8.776470 CAAGAACTTTTTGCATTCATACCAATT 58.224 29.630 0.00 0.00 0.00 2.32
2819 5498 8.314143 AGAACTTTTTGCATTCATACCAATTG 57.686 30.769 0.00 0.00 0.00 2.32
2820 5499 8.149647 AGAACTTTTTGCATTCATACCAATTGA 58.850 29.630 7.12 0.00 0.00 2.57
2821 5500 7.894376 ACTTTTTGCATTCATACCAATTGAG 57.106 32.000 7.12 0.00 0.00 3.02
2822 5501 7.669427 ACTTTTTGCATTCATACCAATTGAGA 58.331 30.769 7.12 0.00 0.00 3.27
2823 5502 8.316214 ACTTTTTGCATTCATACCAATTGAGAT 58.684 29.630 7.12 0.00 0.00 2.75
2824 5503 9.158233 CTTTTTGCATTCATACCAATTGAGATT 57.842 29.630 7.12 0.00 0.00 2.40
2826 5505 9.806203 TTTTGCATTCATACCAATTGAGATTAG 57.194 29.630 7.12 0.00 0.00 1.73
2827 5506 6.973843 TGCATTCATACCAATTGAGATTAGC 58.026 36.000 7.12 2.25 0.00 3.09
2828 5507 6.016024 TGCATTCATACCAATTGAGATTAGCC 60.016 38.462 7.12 0.00 0.00 3.93
2829 5508 6.016024 GCATTCATACCAATTGAGATTAGCCA 60.016 38.462 7.12 0.00 0.00 4.75
2830 5509 7.591165 CATTCATACCAATTGAGATTAGCCAG 58.409 38.462 7.12 0.00 0.00 4.85
2831 5510 6.252599 TCATACCAATTGAGATTAGCCAGT 57.747 37.500 7.12 0.00 0.00 4.00
2832 5511 7.373617 TCATACCAATTGAGATTAGCCAGTA 57.626 36.000 7.12 0.00 0.00 2.74
2833 5512 7.801104 TCATACCAATTGAGATTAGCCAGTAA 58.199 34.615 7.12 0.00 0.00 2.24
2834 5513 7.933577 TCATACCAATTGAGATTAGCCAGTAAG 59.066 37.037 7.12 0.00 0.00 2.34
2835 5514 6.313519 ACCAATTGAGATTAGCCAGTAAGA 57.686 37.500 7.12 0.00 0.00 2.10
2836 5515 6.116126 ACCAATTGAGATTAGCCAGTAAGAC 58.884 40.000 7.12 0.00 0.00 3.01
2837 5516 6.115446 CCAATTGAGATTAGCCAGTAAGACA 58.885 40.000 7.12 0.00 0.00 3.41
2838 5517 6.769822 CCAATTGAGATTAGCCAGTAAGACAT 59.230 38.462 7.12 0.00 0.00 3.06
2839 5518 7.255035 CCAATTGAGATTAGCCAGTAAGACATG 60.255 40.741 7.12 0.00 0.00 3.21
2840 5519 5.939764 TGAGATTAGCCAGTAAGACATGT 57.060 39.130 0.00 0.00 0.00 3.21
2841 5520 7.418337 TTGAGATTAGCCAGTAAGACATGTA 57.582 36.000 0.00 0.00 0.00 2.29
2842 5521 6.806751 TGAGATTAGCCAGTAAGACATGTAC 58.193 40.000 0.00 0.00 0.00 2.90
2843 5522 6.379988 TGAGATTAGCCAGTAAGACATGTACA 59.620 38.462 0.00 0.00 0.00 2.90
2844 5523 7.093509 TGAGATTAGCCAGTAAGACATGTACAA 60.094 37.037 0.00 0.00 0.00 2.41
2845 5524 7.268586 AGATTAGCCAGTAAGACATGTACAAG 58.731 38.462 0.00 0.00 0.00 3.16
2846 5525 6.599356 TTAGCCAGTAAGACATGTACAAGA 57.401 37.500 4.87 0.00 0.00 3.02
2847 5526 5.683876 AGCCAGTAAGACATGTACAAGAT 57.316 39.130 4.87 0.00 0.00 2.40
2848 5527 6.054860 AGCCAGTAAGACATGTACAAGATT 57.945 37.500 4.87 2.27 0.00 2.40
2849 5528 6.109359 AGCCAGTAAGACATGTACAAGATTC 58.891 40.000 4.87 0.00 0.00 2.52
2850 5529 5.874810 GCCAGTAAGACATGTACAAGATTCA 59.125 40.000 4.87 0.00 0.00 2.57
2851 5530 6.371548 GCCAGTAAGACATGTACAAGATTCAA 59.628 38.462 4.87 0.00 0.00 2.69
2852 5531 7.413438 GCCAGTAAGACATGTACAAGATTCAAG 60.413 40.741 4.87 0.00 0.00 3.02
2853 5532 7.604164 CCAGTAAGACATGTACAAGATTCAAGT 59.396 37.037 4.87 0.00 0.00 3.16
2854 5533 8.993121 CAGTAAGACATGTACAAGATTCAAGTT 58.007 33.333 4.87 0.00 0.00 2.66
2915 5594 8.491045 TTTTTCCTTGGATAATCCTTCACTTT 57.509 30.769 0.00 0.00 37.46 2.66
2916 5595 8.491045 TTTTCCTTGGATAATCCTTCACTTTT 57.509 30.769 0.00 0.00 37.46 2.27
2917 5596 9.594936 TTTTCCTTGGATAATCCTTCACTTTTA 57.405 29.630 0.00 0.00 37.46 1.52
2918 5597 8.807948 TTCCTTGGATAATCCTTCACTTTTAG 57.192 34.615 0.00 0.00 37.46 1.85
2919 5598 8.158025 TCCTTGGATAATCCTTCACTTTTAGA 57.842 34.615 0.00 0.00 37.46 2.10
2920 5599 8.611257 TCCTTGGATAATCCTTCACTTTTAGAA 58.389 33.333 0.00 0.00 37.46 2.10
2921 5600 9.243105 CCTTGGATAATCCTTCACTTTTAGAAA 57.757 33.333 0.00 0.00 37.46 2.52
2951 5630 9.953565 ATGTAGTTTGTAGTGGTAATAACATGT 57.046 29.630 0.00 0.00 0.00 3.21
2952 5631 9.781633 TGTAGTTTGTAGTGGTAATAACATGTT 57.218 29.630 16.68 16.68 0.00 2.71
2989 5668 7.589574 TTTTTCTTGTACTCAAAAGGTTTGC 57.410 32.000 0.00 0.00 32.87 3.68
2990 5669 4.545823 TCTTGTACTCAAAAGGTTTGCG 57.454 40.909 0.00 0.00 32.87 4.85
2991 5670 4.193090 TCTTGTACTCAAAAGGTTTGCGA 58.807 39.130 0.00 0.00 32.87 5.10
2992 5671 4.819630 TCTTGTACTCAAAAGGTTTGCGAT 59.180 37.500 0.00 0.00 32.87 4.58
2993 5672 4.742438 TGTACTCAAAAGGTTTGCGATC 57.258 40.909 0.00 0.00 0.00 3.69
2994 5673 4.130857 TGTACTCAAAAGGTTTGCGATCA 58.869 39.130 0.00 0.00 0.00 2.92
2995 5674 3.626028 ACTCAAAAGGTTTGCGATCAC 57.374 42.857 0.00 0.00 0.00 3.06
2996 5675 2.948979 ACTCAAAAGGTTTGCGATCACA 59.051 40.909 0.00 0.00 0.00 3.58
2997 5676 3.569701 ACTCAAAAGGTTTGCGATCACAT 59.430 39.130 0.00 0.00 0.00 3.21
2998 5677 3.899734 TCAAAAGGTTTGCGATCACATG 58.100 40.909 0.00 0.00 0.00 3.21
2999 5678 2.988493 CAAAAGGTTTGCGATCACATGG 59.012 45.455 0.00 0.00 0.00 3.66
3000 5679 1.909700 AAGGTTTGCGATCACATGGT 58.090 45.000 0.00 0.00 0.00 3.55
3001 5680 1.909700 AGGTTTGCGATCACATGGTT 58.090 45.000 0.00 0.00 0.00 3.67
3002 5681 1.812571 AGGTTTGCGATCACATGGTTC 59.187 47.619 0.00 0.00 0.00 3.62
3003 5682 1.812571 GGTTTGCGATCACATGGTTCT 59.187 47.619 0.00 0.00 0.00 3.01
3004 5683 2.228822 GGTTTGCGATCACATGGTTCTT 59.771 45.455 0.00 0.00 0.00 2.52
3005 5684 3.305335 GGTTTGCGATCACATGGTTCTTT 60.305 43.478 0.00 0.00 0.00 2.52
3006 5685 4.083003 GGTTTGCGATCACATGGTTCTTTA 60.083 41.667 0.00 0.00 0.00 1.85
3007 5686 5.457140 GTTTGCGATCACATGGTTCTTTAA 58.543 37.500 0.00 0.00 0.00 1.52
3008 5687 5.697473 TTGCGATCACATGGTTCTTTAAA 57.303 34.783 0.00 0.00 0.00 1.52
3009 5688 5.697473 TGCGATCACATGGTTCTTTAAAA 57.303 34.783 0.00 0.00 0.00 1.52
3010 5689 6.078202 TGCGATCACATGGTTCTTTAAAAA 57.922 33.333 0.00 0.00 0.00 1.94
3068 5747 6.154203 GATGAAATCCATCTTTTTCCCCTC 57.846 41.667 0.00 0.00 46.33 4.30
3069 5748 5.275263 TGAAATCCATCTTTTTCCCCTCT 57.725 39.130 0.00 0.00 32.14 3.69
3070 5749 5.654370 TGAAATCCATCTTTTTCCCCTCTT 58.346 37.500 0.00 0.00 32.14 2.85
3071 5750 5.481473 TGAAATCCATCTTTTTCCCCTCTTG 59.519 40.000 0.00 0.00 32.14 3.02
3072 5751 3.456380 TCCATCTTTTTCCCCTCTTGG 57.544 47.619 0.00 0.00 0.00 3.61
3088 5767 6.716934 CCTCTTGGGCGATAGTATATATGT 57.283 41.667 0.00 0.00 39.35 2.29
3089 5768 6.740110 CCTCTTGGGCGATAGTATATATGTC 58.260 44.000 0.00 0.00 39.35 3.06
3090 5769 6.321435 CCTCTTGGGCGATAGTATATATGTCA 59.679 42.308 0.00 0.00 39.35 3.58
3091 5770 7.147897 CCTCTTGGGCGATAGTATATATGTCAA 60.148 40.741 0.00 0.00 39.35 3.18
3092 5771 8.129496 TCTTGGGCGATAGTATATATGTCAAA 57.871 34.615 0.00 0.00 39.35 2.69
3093 5772 8.590204 TCTTGGGCGATAGTATATATGTCAAAA 58.410 33.333 0.00 0.00 39.35 2.44
3094 5773 9.383519 CTTGGGCGATAGTATATATGTCAAAAT 57.616 33.333 0.00 0.00 39.35 1.82
3096 5775 9.811995 TGGGCGATAGTATATATGTCAAAATAC 57.188 33.333 0.00 0.00 39.35 1.89
3097 5776 9.811995 GGGCGATAGTATATATGTCAAAATACA 57.188 33.333 0.00 0.00 39.35 2.29
3161 5840 9.067986 AGCTATATTTTTGGAAGTGTATAAGGC 57.932 33.333 0.00 0.00 0.00 4.35
3162 5841 9.067986 GCTATATTTTTGGAAGTGTATAAGGCT 57.932 33.333 0.00 0.00 0.00 4.58
3164 5843 5.873179 TTTTTGGAAGTGTATAAGGCTCG 57.127 39.130 0.00 0.00 0.00 5.03
3165 5844 4.811969 TTTGGAAGTGTATAAGGCTCGA 57.188 40.909 0.00 0.00 0.00 4.04
3166 5845 5.353394 TTTGGAAGTGTATAAGGCTCGAT 57.647 39.130 0.00 0.00 0.00 3.59
3167 5846 4.585955 TGGAAGTGTATAAGGCTCGATC 57.414 45.455 0.00 0.00 0.00 3.69
3168 5847 4.215908 TGGAAGTGTATAAGGCTCGATCT 58.784 43.478 0.00 0.00 0.00 2.75
3169 5848 5.382616 TGGAAGTGTATAAGGCTCGATCTA 58.617 41.667 0.00 0.00 0.00 1.98
3170 5849 5.241064 TGGAAGTGTATAAGGCTCGATCTAC 59.759 44.000 0.00 0.00 0.00 2.59
3171 5850 5.474189 GGAAGTGTATAAGGCTCGATCTACT 59.526 44.000 0.00 0.00 0.00 2.57
3172 5851 5.950758 AGTGTATAAGGCTCGATCTACTG 57.049 43.478 0.00 0.00 0.00 2.74
3173 5852 4.216687 AGTGTATAAGGCTCGATCTACTGC 59.783 45.833 0.00 0.00 0.00 4.40
3174 5853 4.023107 GTGTATAAGGCTCGATCTACTGCA 60.023 45.833 0.00 0.00 0.00 4.41
3175 5854 4.583073 TGTATAAGGCTCGATCTACTGCAA 59.417 41.667 0.00 0.00 0.00 4.08
3176 5855 2.593346 AAGGCTCGATCTACTGCAAG 57.407 50.000 0.00 0.00 42.29 4.01
3195 5874 7.526142 TGCAAGTTAGTAGGTAGATGATAGG 57.474 40.000 0.00 0.00 0.00 2.57
3196 5875 7.295340 TGCAAGTTAGTAGGTAGATGATAGGA 58.705 38.462 0.00 0.00 0.00 2.94
3197 5876 7.950684 TGCAAGTTAGTAGGTAGATGATAGGAT 59.049 37.037 0.00 0.00 0.00 3.24
3198 5877 8.808092 GCAAGTTAGTAGGTAGATGATAGGATT 58.192 37.037 0.00 0.00 0.00 3.01
3200 5879 9.884814 AAGTTAGTAGGTAGATGATAGGATTGT 57.115 33.333 0.00 0.00 0.00 2.71
3205 5884 9.830186 AGTAGGTAGATGATAGGATTGTAATGT 57.170 33.333 0.00 0.00 0.00 2.71
3232 5911 7.920160 TTTCACATTTCATAGACTGTATGCA 57.080 32.000 0.00 0.00 0.00 3.96
3233 5912 7.920160 TTCACATTTCATAGACTGTATGCAA 57.080 32.000 0.00 0.00 0.00 4.08
3234 5913 7.307493 TCACATTTCATAGACTGTATGCAAC 57.693 36.000 0.00 0.00 0.00 4.17
3235 5914 7.105588 TCACATTTCATAGACTGTATGCAACT 58.894 34.615 0.00 0.00 0.00 3.16
3236 5915 7.607607 TCACATTTCATAGACTGTATGCAACTT 59.392 33.333 0.00 0.00 0.00 2.66
3237 5916 7.695201 CACATTTCATAGACTGTATGCAACTTG 59.305 37.037 0.00 0.00 0.00 3.16
3238 5917 6.741992 TTTCATAGACTGTATGCAACTTGG 57.258 37.500 0.00 0.00 0.00 3.61
3239 5918 5.420725 TCATAGACTGTATGCAACTTGGT 57.579 39.130 0.00 0.00 0.00 3.67
3240 5919 5.419542 TCATAGACTGTATGCAACTTGGTC 58.580 41.667 0.00 0.00 0.00 4.02
3241 5920 5.187772 TCATAGACTGTATGCAACTTGGTCT 59.812 40.000 13.98 13.98 37.15 3.85
3242 5921 4.357918 AGACTGTATGCAACTTGGTCTT 57.642 40.909 0.00 0.00 33.05 3.01
3243 5922 4.718961 AGACTGTATGCAACTTGGTCTTT 58.281 39.130 0.00 0.00 33.05 2.52
3244 5923 5.133221 AGACTGTATGCAACTTGGTCTTTT 58.867 37.500 0.00 0.00 33.05 2.27
3245 5924 5.594317 AGACTGTATGCAACTTGGTCTTTTT 59.406 36.000 0.00 0.00 33.05 1.94
3246 5925 6.770785 AGACTGTATGCAACTTGGTCTTTTTA 59.229 34.615 0.00 0.00 33.05 1.52
3247 5926 7.284489 AGACTGTATGCAACTTGGTCTTTTTAA 59.716 33.333 0.00 0.00 33.05 1.52
3248 5927 7.777095 ACTGTATGCAACTTGGTCTTTTTAAA 58.223 30.769 0.00 0.00 0.00 1.52
3249 5928 8.254508 ACTGTATGCAACTTGGTCTTTTTAAAA 58.745 29.630 0.00 0.00 0.00 1.52
3250 5929 9.092876 CTGTATGCAACTTGGTCTTTTTAAAAA 57.907 29.630 12.62 12.62 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 4.269183 TGTGGCTTCAACCATTATACTGG 58.731 43.478 7.55 7.55 43.01 4.00
56 57 0.109342 CTCCAGCTCCAACCACAAGT 59.891 55.000 0.00 0.00 0.00 3.16
67 68 2.144730 CTAGATGCAATGCTCCAGCTC 58.855 52.381 6.82 0.00 42.66 4.09
165 166 1.004745 AGAATTGTCATCCTTGGCGGT 59.995 47.619 0.00 0.00 0.00 5.68
167 168 1.202222 GCAGAATTGTCATCCTTGGCG 60.202 52.381 0.00 0.00 0.00 5.69
177 178 4.377431 CCAACGAGTACAAGCAGAATTGTC 60.377 45.833 0.00 0.00 42.33 3.18
189 190 2.094597 CCGTAATGTCCCAACGAGTACA 60.095 50.000 0.00 0.00 38.89 2.90
208 209 2.317230 AACGCAAGAAGGTGTTCCG 58.683 52.632 0.00 0.00 36.86 4.30
309 310 5.617528 TCCGTGCTTATATTTAGAACCCA 57.382 39.130 0.00 0.00 0.00 4.51
320 321 3.255725 CGAAACAGGTTCCGTGCTTATA 58.744 45.455 0.00 0.00 31.99 0.98
326 329 1.278637 GCACGAAACAGGTTCCGTG 59.721 57.895 17.76 17.76 40.57 4.94
327 330 0.534203 ATGCACGAAACAGGTTCCGT 60.534 50.000 0.00 0.00 31.99 4.69
535 541 2.961768 CCACATGTTGGTTCGCCC 59.038 61.111 0.00 0.00 41.10 6.13
544 550 6.012858 TCCTTCTAACTATCCAACCACATGTT 60.013 38.462 0.00 0.00 37.80 2.71
545 551 5.487488 TCCTTCTAACTATCCAACCACATGT 59.513 40.000 0.00 0.00 0.00 3.21
546 552 5.817816 GTCCTTCTAACTATCCAACCACATG 59.182 44.000 0.00 0.00 0.00 3.21
547 553 5.726793 AGTCCTTCTAACTATCCAACCACAT 59.273 40.000 0.00 0.00 0.00 3.21
548 554 5.046591 CAGTCCTTCTAACTATCCAACCACA 60.047 44.000 0.00 0.00 0.00 4.17
549 555 5.046520 ACAGTCCTTCTAACTATCCAACCAC 60.047 44.000 0.00 0.00 0.00 4.16
550 556 5.046591 CACAGTCCTTCTAACTATCCAACCA 60.047 44.000 0.00 0.00 0.00 3.67
551 557 5.420409 CACAGTCCTTCTAACTATCCAACC 58.580 45.833 0.00 0.00 0.00 3.77
552 558 5.046520 ACCACAGTCCTTCTAACTATCCAAC 60.047 44.000 0.00 0.00 0.00 3.77
553 559 5.091552 ACCACAGTCCTTCTAACTATCCAA 58.908 41.667 0.00 0.00 0.00 3.53
554 560 4.684724 ACCACAGTCCTTCTAACTATCCA 58.315 43.478 0.00 0.00 0.00 3.41
555 561 6.980416 ATACCACAGTCCTTCTAACTATCC 57.020 41.667 0.00 0.00 0.00 2.59
556 562 8.240267 AGAATACCACAGTCCTTCTAACTATC 57.760 38.462 0.00 0.00 30.37 2.08
557 563 7.839705 TGAGAATACCACAGTCCTTCTAACTAT 59.160 37.037 0.00 0.00 31.61 2.12
558 564 7.179966 TGAGAATACCACAGTCCTTCTAACTA 58.820 38.462 0.00 0.00 31.61 2.24
559 565 6.017192 TGAGAATACCACAGTCCTTCTAACT 58.983 40.000 0.00 0.00 31.61 2.24
560 566 6.282199 TGAGAATACCACAGTCCTTCTAAC 57.718 41.667 0.00 0.00 31.61 2.34
561 567 5.105310 GCTGAGAATACCACAGTCCTTCTAA 60.105 44.000 0.00 0.00 31.61 2.10
562 568 4.402793 GCTGAGAATACCACAGTCCTTCTA 59.597 45.833 0.00 0.00 31.61 2.10
563 569 3.196685 GCTGAGAATACCACAGTCCTTCT 59.803 47.826 0.00 0.00 33.22 2.85
564 570 3.526534 GCTGAGAATACCACAGTCCTTC 58.473 50.000 0.00 0.00 34.60 3.46
565 571 2.237392 GGCTGAGAATACCACAGTCCTT 59.763 50.000 0.00 0.00 34.60 3.36
566 572 1.834263 GGCTGAGAATACCACAGTCCT 59.166 52.381 0.00 0.00 34.60 3.85
567 573 1.134371 GGGCTGAGAATACCACAGTCC 60.134 57.143 0.00 0.00 46.48 3.85
568 574 1.555075 TGGGCTGAGAATACCACAGTC 59.445 52.381 0.00 0.00 35.82 3.51
569 575 1.656587 TGGGCTGAGAATACCACAGT 58.343 50.000 0.00 0.00 34.60 3.55
573 579 0.911769 CTGGTGGGCTGAGAATACCA 59.088 55.000 0.00 0.00 38.98 3.25
574 580 0.181350 CCTGGTGGGCTGAGAATACC 59.819 60.000 0.00 0.00 0.00 2.73
575 581 3.788672 CCTGGTGGGCTGAGAATAC 57.211 57.895 0.00 0.00 0.00 1.89
586 592 0.250901 CAGGACTTGAACCCTGGTGG 60.251 60.000 0.00 0.00 44.68 4.61
587 593 3.329300 CAGGACTTGAACCCTGGTG 57.671 57.895 0.00 0.00 44.68 4.17
591 597 1.062488 AGCACCAGGACTTGAACCCT 61.062 55.000 0.00 0.00 0.00 4.34
592 598 0.606673 GAGCACCAGGACTTGAACCC 60.607 60.000 0.00 0.00 0.00 4.11
593 599 0.951040 CGAGCACCAGGACTTGAACC 60.951 60.000 0.00 0.00 0.00 3.62
594 600 1.569479 GCGAGCACCAGGACTTGAAC 61.569 60.000 0.00 0.00 0.00 3.18
595 601 1.301716 GCGAGCACCAGGACTTGAA 60.302 57.895 0.00 0.00 0.00 2.69
596 602 1.830587 ATGCGAGCACCAGGACTTGA 61.831 55.000 0.00 0.00 0.00 3.02
597 603 0.957395 AATGCGAGCACCAGGACTTG 60.957 55.000 0.00 0.00 0.00 3.16
598 604 0.250901 AAATGCGAGCACCAGGACTT 60.251 50.000 0.00 0.00 0.00 3.01
599 605 0.613260 TAAATGCGAGCACCAGGACT 59.387 50.000 0.00 0.00 0.00 3.85
600 606 1.668419 ATAAATGCGAGCACCAGGAC 58.332 50.000 0.00 0.00 0.00 3.85
601 607 2.288666 GAATAAATGCGAGCACCAGGA 58.711 47.619 0.00 0.00 0.00 3.86
602 608 1.334869 GGAATAAATGCGAGCACCAGG 59.665 52.381 0.00 0.00 0.00 4.45
603 609 2.032550 CAGGAATAAATGCGAGCACCAG 59.967 50.000 0.00 0.00 0.00 4.00
604 610 2.016318 CAGGAATAAATGCGAGCACCA 58.984 47.619 0.00 0.00 0.00 4.17
605 611 1.334869 CCAGGAATAAATGCGAGCACC 59.665 52.381 0.00 0.00 0.00 5.01
606 612 2.288666 TCCAGGAATAAATGCGAGCAC 58.711 47.619 0.00 0.00 0.00 4.40
607 613 2.708216 TCCAGGAATAAATGCGAGCA 57.292 45.000 0.00 0.00 0.00 4.26
608 614 4.574599 AAATCCAGGAATAAATGCGAGC 57.425 40.909 0.00 0.00 0.00 5.03
609 615 8.352201 TGAAATAAATCCAGGAATAAATGCGAG 58.648 33.333 0.00 0.00 0.00 5.03
610 616 8.231692 TGAAATAAATCCAGGAATAAATGCGA 57.768 30.769 0.00 0.00 0.00 5.10
611 617 8.511465 CTGAAATAAATCCAGGAATAAATGCG 57.489 34.615 0.00 0.00 0.00 4.73
621 627 6.462067 GCCAGAAATCCTGAAATAAATCCAGG 60.462 42.308 0.00 0.00 45.78 4.45
622 628 6.510536 GCCAGAAATCCTGAAATAAATCCAG 58.489 40.000 0.00 0.00 45.78 3.86
623 629 5.067674 CGCCAGAAATCCTGAAATAAATCCA 59.932 40.000 0.00 0.00 45.78 3.41
624 630 5.299279 TCGCCAGAAATCCTGAAATAAATCC 59.701 40.000 0.00 0.00 45.78 3.01
625 631 6.377327 TCGCCAGAAATCCTGAAATAAATC 57.623 37.500 0.00 0.00 45.78 2.17
626 632 6.736794 GCATCGCCAGAAATCCTGAAATAAAT 60.737 38.462 0.00 0.00 45.78 1.40
627 633 5.450412 GCATCGCCAGAAATCCTGAAATAAA 60.450 40.000 0.00 0.00 45.78 1.40
628 634 4.036734 GCATCGCCAGAAATCCTGAAATAA 59.963 41.667 0.00 0.00 45.78 1.40
629 635 3.565482 GCATCGCCAGAAATCCTGAAATA 59.435 43.478 0.00 0.00 45.78 1.40
630 636 2.360165 GCATCGCCAGAAATCCTGAAAT 59.640 45.455 0.00 0.00 45.78 2.17
631 637 1.745087 GCATCGCCAGAAATCCTGAAA 59.255 47.619 0.00 0.00 45.78 2.69
632 638 1.339920 TGCATCGCCAGAAATCCTGAA 60.340 47.619 0.00 0.00 45.78 3.02
633 639 0.252761 TGCATCGCCAGAAATCCTGA 59.747 50.000 0.00 0.00 45.78 3.86
634 640 0.379669 GTGCATCGCCAGAAATCCTG 59.620 55.000 0.00 0.00 42.55 3.86
635 641 0.035152 TGTGCATCGCCAGAAATCCT 60.035 50.000 0.00 0.00 0.00 3.24
636 642 1.027357 ATGTGCATCGCCAGAAATCC 58.973 50.000 0.00 0.00 0.00 3.01
637 643 2.097954 TGAATGTGCATCGCCAGAAATC 59.902 45.455 0.00 0.00 0.00 2.17
638 644 2.093890 TGAATGTGCATCGCCAGAAAT 58.906 42.857 0.00 0.00 0.00 2.17
639 645 1.469703 CTGAATGTGCATCGCCAGAAA 59.530 47.619 0.00 0.00 0.00 2.52
640 646 1.089112 CTGAATGTGCATCGCCAGAA 58.911 50.000 0.00 0.00 0.00 3.02
641 647 0.036105 ACTGAATGTGCATCGCCAGA 60.036 50.000 13.54 0.00 0.00 3.86
642 648 0.376152 GACTGAATGTGCATCGCCAG 59.624 55.000 0.00 0.00 0.00 4.85
643 649 0.036105 AGACTGAATGTGCATCGCCA 60.036 50.000 0.00 0.00 0.00 5.69
644 650 1.089920 AAGACTGAATGTGCATCGCC 58.910 50.000 0.00 0.00 0.00 5.54
645 651 2.778659 GAAAGACTGAATGTGCATCGC 58.221 47.619 0.00 0.00 0.00 4.58
646 652 2.222886 CCGAAAGACTGAATGTGCATCG 60.223 50.000 0.00 0.00 0.00 3.84
647 653 3.002791 TCCGAAAGACTGAATGTGCATC 58.997 45.455 0.00 0.00 0.00 3.91
648 654 3.005554 CTCCGAAAGACTGAATGTGCAT 58.994 45.455 0.00 0.00 0.00 3.96
649 655 2.416747 CTCCGAAAGACTGAATGTGCA 58.583 47.619 0.00 0.00 0.00 4.57
650 656 1.734465 CCTCCGAAAGACTGAATGTGC 59.266 52.381 0.00 0.00 0.00 4.57
651 657 2.738846 CACCTCCGAAAGACTGAATGTG 59.261 50.000 0.00 0.00 0.00 3.21
652 658 2.872038 GCACCTCCGAAAGACTGAATGT 60.872 50.000 0.00 0.00 0.00 2.71
653 659 1.734465 GCACCTCCGAAAGACTGAATG 59.266 52.381 0.00 0.00 0.00 2.67
654 660 1.625818 AGCACCTCCGAAAGACTGAAT 59.374 47.619 0.00 0.00 0.00 2.57
655 661 1.000955 GAGCACCTCCGAAAGACTGAA 59.999 52.381 0.00 0.00 0.00 3.02
656 662 0.603569 GAGCACCTCCGAAAGACTGA 59.396 55.000 0.00 0.00 0.00 3.41
657 663 0.318441 TGAGCACCTCCGAAAGACTG 59.682 55.000 0.00 0.00 0.00 3.51
658 664 1.270907 ATGAGCACCTCCGAAAGACT 58.729 50.000 0.00 0.00 0.00 3.24
659 665 2.482142 CCTATGAGCACCTCCGAAAGAC 60.482 54.545 0.00 0.00 0.00 3.01
660 666 1.757118 CCTATGAGCACCTCCGAAAGA 59.243 52.381 0.00 0.00 0.00 2.52
661 667 1.202580 CCCTATGAGCACCTCCGAAAG 60.203 57.143 0.00 0.00 0.00 2.62
662 668 0.830648 CCCTATGAGCACCTCCGAAA 59.169 55.000 0.00 0.00 0.00 3.46
663 669 1.048724 CCCCTATGAGCACCTCCGAA 61.049 60.000 0.00 0.00 0.00 4.30
664 670 1.457643 CCCCTATGAGCACCTCCGA 60.458 63.158 0.00 0.00 0.00 4.55
665 671 0.469331 TACCCCTATGAGCACCTCCG 60.469 60.000 0.00 0.00 0.00 4.63
666 672 1.343069 CTACCCCTATGAGCACCTCC 58.657 60.000 0.00 0.00 0.00 4.30
667 673 1.343069 CCTACCCCTATGAGCACCTC 58.657 60.000 0.00 0.00 0.00 3.85
668 674 0.104934 CCCTACCCCTATGAGCACCT 60.105 60.000 0.00 0.00 0.00 4.00
669 675 0.400093 ACCCTACCCCTATGAGCACC 60.400 60.000 0.00 0.00 0.00 5.01
670 676 0.759346 CACCCTACCCCTATGAGCAC 59.241 60.000 0.00 0.00 0.00 4.40
671 677 0.341961 ACACCCTACCCCTATGAGCA 59.658 55.000 0.00 0.00 0.00 4.26
672 678 0.759346 CACACCCTACCCCTATGAGC 59.241 60.000 0.00 0.00 0.00 4.26
673 679 0.759346 GCACACCCTACCCCTATGAG 59.241 60.000 0.00 0.00 0.00 2.90
674 680 1.046472 CGCACACCCTACCCCTATGA 61.046 60.000 0.00 0.00 0.00 2.15
675 681 1.335132 ACGCACACCCTACCCCTATG 61.335 60.000 0.00 0.00 0.00 2.23
676 682 0.262580 TACGCACACCCTACCCCTAT 59.737 55.000 0.00 0.00 0.00 2.57
677 683 0.262580 ATACGCACACCCTACCCCTA 59.737 55.000 0.00 0.00 0.00 3.53
678 684 1.002533 ATACGCACACCCTACCCCT 59.997 57.895 0.00 0.00 0.00 4.79
679 685 1.145377 CATACGCACACCCTACCCC 59.855 63.158 0.00 0.00 0.00 4.95
680 686 1.113788 TACATACGCACACCCTACCC 58.886 55.000 0.00 0.00 0.00 3.69
681 687 1.534595 CGTACATACGCACACCCTACC 60.535 57.143 0.00 0.00 43.14 3.18
682 688 1.831343 CGTACATACGCACACCCTAC 58.169 55.000 0.00 0.00 43.14 3.18
693 699 5.899299 ACTCACCCTTATGAACGTACATAC 58.101 41.667 0.00 0.00 33.31 2.39
694 700 7.828508 ATACTCACCCTTATGAACGTACATA 57.171 36.000 0.00 0.00 0.00 2.29
695 701 6.726490 ATACTCACCCTTATGAACGTACAT 57.274 37.500 0.00 0.00 0.00 2.29
696 702 7.654568 CATATACTCACCCTTATGAACGTACA 58.345 38.462 0.00 0.00 0.00 2.90
697 703 6.585322 GCATATACTCACCCTTATGAACGTAC 59.415 42.308 0.00 0.00 0.00 3.67
698 704 6.569035 CGCATATACTCACCCTTATGAACGTA 60.569 42.308 0.00 0.00 0.00 3.57
699 705 5.539048 GCATATACTCACCCTTATGAACGT 58.461 41.667 0.00 0.00 0.00 3.99
700 706 4.621460 CGCATATACTCACCCTTATGAACG 59.379 45.833 0.00 0.00 0.00 3.95
701 707 4.389077 GCGCATATACTCACCCTTATGAAC 59.611 45.833 0.30 0.00 0.00 3.18
702 708 4.566004 GCGCATATACTCACCCTTATGAA 58.434 43.478 0.30 0.00 0.00 2.57
703 709 3.366985 CGCGCATATACTCACCCTTATGA 60.367 47.826 8.75 0.00 0.00 2.15
704 710 2.923655 CGCGCATATACTCACCCTTATG 59.076 50.000 8.75 0.00 0.00 1.90
705 711 2.561419 ACGCGCATATACTCACCCTTAT 59.439 45.455 5.73 0.00 0.00 1.73
706 712 1.958579 ACGCGCATATACTCACCCTTA 59.041 47.619 5.73 0.00 0.00 2.69
707 713 0.750850 ACGCGCATATACTCACCCTT 59.249 50.000 5.73 0.00 0.00 3.95
708 714 0.032130 CACGCGCATATACTCACCCT 59.968 55.000 5.73 0.00 0.00 4.34
709 715 0.249322 ACACGCGCATATACTCACCC 60.249 55.000 5.73 0.00 0.00 4.61
710 716 2.410785 TACACGCGCATATACTCACC 57.589 50.000 5.73 0.00 0.00 4.02
711 717 5.329493 TCATATACACGCGCATATACTCAC 58.671 41.667 5.73 0.00 0.00 3.51
712 718 5.554822 TCATATACACGCGCATATACTCA 57.445 39.130 5.73 0.00 0.00 3.41
713 719 4.438145 GCTCATATACACGCGCATATACTC 59.562 45.833 5.73 0.00 0.00 2.59
714 720 4.352039 GCTCATATACACGCGCATATACT 58.648 43.478 5.73 0.00 0.00 2.12
715 721 3.177838 CGCTCATATACACGCGCATATAC 59.822 47.826 5.73 0.29 39.11 1.47
716 722 3.359654 CGCTCATATACACGCGCATATA 58.640 45.455 5.73 9.29 39.11 0.86
717 723 2.185262 CGCTCATATACACGCGCATAT 58.815 47.619 5.73 7.02 39.11 1.78
718 724 1.613270 CGCTCATATACACGCGCATA 58.387 50.000 5.73 1.53 39.11 3.14
719 725 2.434688 CGCTCATATACACGCGCAT 58.565 52.632 5.73 0.00 39.11 4.73
720 726 3.916439 CGCTCATATACACGCGCA 58.084 55.556 5.73 0.00 39.11 6.09
724 730 2.193447 ACACAAGCGCTCATATACACG 58.807 47.619 12.06 0.00 0.00 4.49
725 731 3.243877 CAGACACAAGCGCTCATATACAC 59.756 47.826 12.06 0.00 0.00 2.90
726 732 3.119137 ACAGACACAAGCGCTCATATACA 60.119 43.478 12.06 0.00 0.00 2.29
727 733 3.448686 ACAGACACAAGCGCTCATATAC 58.551 45.455 12.06 1.00 0.00 1.47
728 734 3.801114 ACAGACACAAGCGCTCATATA 57.199 42.857 12.06 0.00 0.00 0.86
729 735 2.680312 ACAGACACAAGCGCTCATAT 57.320 45.000 12.06 0.00 0.00 1.78
730 736 2.492088 AGTACAGACACAAGCGCTCATA 59.508 45.455 12.06 0.00 0.00 2.15
731 737 1.273606 AGTACAGACACAAGCGCTCAT 59.726 47.619 12.06 0.00 0.00 2.90
732 738 0.673985 AGTACAGACACAAGCGCTCA 59.326 50.000 12.06 0.00 0.00 4.26
733 739 1.063806 CAGTACAGACACAAGCGCTC 58.936 55.000 12.06 0.00 0.00 5.03
734 740 0.389391 ACAGTACAGACACAAGCGCT 59.611 50.000 2.64 2.64 0.00 5.92
735 741 2.060326 TACAGTACAGACACAAGCGC 57.940 50.000 0.00 0.00 0.00 5.92
736 742 6.699895 TTTAATACAGTACAGACACAAGCG 57.300 37.500 0.00 0.00 0.00 4.68
759 765 4.715297 TCTAGAGGGGCGAGATTACTTTTT 59.285 41.667 0.00 0.00 0.00 1.94
760 766 4.287552 TCTAGAGGGGCGAGATTACTTTT 58.712 43.478 0.00 0.00 0.00 2.27
761 767 3.912248 TCTAGAGGGGCGAGATTACTTT 58.088 45.455 0.00 0.00 0.00 2.66
762 768 3.596940 TCTAGAGGGGCGAGATTACTT 57.403 47.619 0.00 0.00 0.00 2.24
763 769 3.426615 CATCTAGAGGGGCGAGATTACT 58.573 50.000 0.00 0.00 36.92 2.24
764 770 2.494073 CCATCTAGAGGGGCGAGATTAC 59.506 54.545 15.90 0.00 36.92 1.89
781 787 6.109156 AGGTCATTTTTGTTTTACCCCATC 57.891 37.500 0.00 0.00 0.00 3.51
808 814 6.088483 TCAGTTAAGTGAAGTATTTACACGCG 59.912 38.462 10.63 3.53 37.00 6.01
831 1827 4.258457 TCCTCTCCCCTTTTGTTTTTCA 57.742 40.909 0.00 0.00 0.00 2.69
832 1828 5.607939 TTTCCTCTCCCCTTTTGTTTTTC 57.392 39.130 0.00 0.00 0.00 2.29
843 1846 9.647918 AGATAAGATTTTTATTTTCCTCTCCCC 57.352 33.333 0.00 0.00 0.00 4.81
856 1859 9.838339 GTGGGAGAAGATGAGATAAGATTTTTA 57.162 33.333 0.00 0.00 0.00 1.52
990 1995 3.746949 GAGAGACATGCGGCCTGGG 62.747 68.421 10.02 0.00 0.00 4.45
1420 2446 5.661056 ATTCAGATCCTACGTCACAGAAA 57.339 39.130 0.00 0.00 0.00 2.52
1458 2490 7.013750 ACCTCTCAAGAAAAACTGAAGATTTCC 59.986 37.037 8.63 0.00 34.39 3.13
1459 2491 7.935520 ACCTCTCAAGAAAAACTGAAGATTTC 58.064 34.615 0.00 0.00 34.14 2.17
1464 2496 4.212214 CGGACCTCTCAAGAAAAACTGAAG 59.788 45.833 0.00 0.00 0.00 3.02
1482 2514 1.305930 AAATTTCTCTGGCGCGGACC 61.306 55.000 8.83 0.99 0.00 4.46
1661 2696 1.293062 ACATGAACATGGAGCCCTCT 58.707 50.000 17.25 0.00 42.91 3.69
1686 2721 3.062763 CTCAGTGCACTACAAAGAGTGG 58.937 50.000 21.20 2.86 45.85 4.00
1700 2735 5.391416 GGAAAAGAATTCAGTAGCTCAGTGC 60.391 44.000 8.44 0.00 43.29 4.40
1718 2753 6.147864 TCTTTTGGTTCACATGAGGAAAAG 57.852 37.500 0.00 5.67 32.51 2.27
1729 2764 5.774498 AAGGATTCACTCTTTTGGTTCAC 57.226 39.130 0.00 0.00 0.00 3.18
1759 2794 4.408276 ACAAGTACCAGCAGAGTTCTAGA 58.592 43.478 0.00 0.00 0.00 2.43
1770 2812 4.695455 TCAGCAATCTAAACAAGTACCAGC 59.305 41.667 0.00 0.00 0.00 4.85
1779 2821 8.791675 TCATGTATGTTTTCAGCAATCTAAACA 58.208 29.630 0.00 0.00 42.57 2.83
1780 2822 9.624697 TTCATGTATGTTTTCAGCAATCTAAAC 57.375 29.630 0.00 0.00 0.00 2.01
1781 2823 9.844790 CTTCATGTATGTTTTCAGCAATCTAAA 57.155 29.630 0.00 0.00 0.00 1.85
1782 2824 7.970061 GCTTCATGTATGTTTTCAGCAATCTAA 59.030 33.333 0.00 0.00 0.00 2.10
1865 2960 4.354587 GAATGTTAGCCAGCAATGTAAGC 58.645 43.478 0.00 0.00 0.00 3.09
1866 2961 4.641989 AGGAATGTTAGCCAGCAATGTAAG 59.358 41.667 0.00 0.00 0.00 2.34
1877 3088 2.290323 ACACAGGTCAGGAATGTTAGCC 60.290 50.000 0.00 0.00 0.00 3.93
1878 3089 3.059352 ACACAGGTCAGGAATGTTAGC 57.941 47.619 0.00 0.00 0.00 3.09
1879 3090 5.063204 TCAAACACAGGTCAGGAATGTTAG 58.937 41.667 0.00 0.00 33.27 2.34
1891 3103 2.596346 TGCCAATGATCAAACACAGGT 58.404 42.857 0.00 0.00 0.00 4.00
1892 3104 3.880047 ATGCCAATGATCAAACACAGG 57.120 42.857 0.00 0.00 0.00 4.00
1893 3105 6.474427 GTCATAATGCCAATGATCAAACACAG 59.526 38.462 0.00 0.00 35.87 3.66
1894 3106 6.071503 TGTCATAATGCCAATGATCAAACACA 60.072 34.615 0.00 0.00 35.87 3.72
1966 4631 2.972713 TGGATGGGATAACAGGTAGAGC 59.027 50.000 0.00 0.00 0.00 4.09
1971 4636 4.631234 TCTAAGTGGATGGGATAACAGGT 58.369 43.478 0.00 0.00 0.00 4.00
1973 4638 6.425210 TGATCTAAGTGGATGGGATAACAG 57.575 41.667 0.00 0.00 0.00 3.16
2015 4680 7.980662 CCATTGCATGAGAATTAACATGGTTAA 59.019 33.333 19.15 4.25 42.53 2.01
2068 4733 0.457035 AGCAACCAACTGCACAAGTG 59.543 50.000 0.00 0.00 45.18 3.16
2167 4832 0.614979 CTCTTCGGGGAACTCCTGGA 60.615 60.000 0.00 0.00 42.31 3.86
2311 4976 2.744202 CAAGTTTACTGGCTACTGCAGG 59.256 50.000 19.93 1.57 41.91 4.85
2350 5015 3.756434 TCCTTAACACTATGGTTGCAAGC 59.244 43.478 21.51 21.51 32.29 4.01
2355 5020 6.071391 AGCCAATTTCCTTAACACTATGGTTG 60.071 38.462 0.00 0.00 32.29 3.77
2390 5055 1.822371 GCCCGCTAATTTCCTTTTCCA 59.178 47.619 0.00 0.00 0.00 3.53
2407 5072 3.728076 TTCAGTACATAGTGATCGCCC 57.272 47.619 1.76 0.00 35.72 6.13
2449 5114 8.824159 AACCATTTACATATTCTGATCTCGAG 57.176 34.615 5.93 5.93 0.00 4.04
2666 5339 8.203485 ACATAAAGCAATTCAAGGAAAGTTCAA 58.797 29.630 0.00 0.00 0.00 2.69
2674 5347 7.725251 ACTTTCAACATAAAGCAATTCAAGGA 58.275 30.769 0.00 0.00 39.59 3.36
2724 5403 4.570772 ACCGTTGGTTGAATCGAATCATAG 59.429 41.667 3.56 0.00 27.29 2.23
2726 5405 3.343617 ACCGTTGGTTGAATCGAATCAT 58.656 40.909 3.56 0.00 27.29 2.45
2733 5412 3.143728 AGTGGTAACCGTTGGTTGAATC 58.856 45.455 11.38 0.00 46.35 2.52
2750 5429 7.611213 AAAAATTAGTGAGACGGATAAGTGG 57.389 36.000 0.00 0.00 0.00 4.00
2753 5432 9.046296 AGCATAAAAATTAGTGAGACGGATAAG 57.954 33.333 0.00 0.00 0.00 1.73
2773 5452 9.618890 AGTTCTTGCAGAAGATTATAAGCATAA 57.381 29.630 3.17 0.00 38.05 1.90
2774 5453 9.618890 AAGTTCTTGCAGAAGATTATAAGCATA 57.381 29.630 3.17 0.00 38.05 3.14
2775 5454 8.517062 AAGTTCTTGCAGAAGATTATAAGCAT 57.483 30.769 3.17 0.00 38.05 3.79
2776 5455 7.928307 AAGTTCTTGCAGAAGATTATAAGCA 57.072 32.000 3.17 0.00 38.05 3.91
2777 5456 9.631452 AAAAAGTTCTTGCAGAAGATTATAAGC 57.369 29.630 0.00 0.00 38.05 3.09
2779 5458 9.410556 GCAAAAAGTTCTTGCAGAAGATTATAA 57.589 29.630 9.05 0.00 46.78 0.98
2780 5459 8.970691 GCAAAAAGTTCTTGCAGAAGATTATA 57.029 30.769 9.05 0.00 46.78 0.98
2781 5460 7.880059 GCAAAAAGTTCTTGCAGAAGATTAT 57.120 32.000 9.05 0.00 46.78 1.28
2792 5471 7.712264 TTGGTATGAATGCAAAAAGTTCTTG 57.288 32.000 0.00 0.00 0.00 3.02
2793 5472 8.776470 CAATTGGTATGAATGCAAAAAGTTCTT 58.224 29.630 0.00 0.00 0.00 2.52
2794 5473 8.149647 TCAATTGGTATGAATGCAAAAAGTTCT 58.850 29.630 5.42 0.00 0.00 3.01
2795 5474 8.309163 TCAATTGGTATGAATGCAAAAAGTTC 57.691 30.769 5.42 0.00 0.00 3.01
2796 5475 8.149647 TCTCAATTGGTATGAATGCAAAAAGTT 58.850 29.630 5.42 0.00 0.00 2.66
2797 5476 7.669427 TCTCAATTGGTATGAATGCAAAAAGT 58.331 30.769 5.42 0.00 0.00 2.66
2798 5477 8.712285 ATCTCAATTGGTATGAATGCAAAAAG 57.288 30.769 5.42 0.00 0.00 2.27
2800 5479 9.806203 CTAATCTCAATTGGTATGAATGCAAAA 57.194 29.630 5.42 0.00 0.00 2.44
2801 5480 7.922278 GCTAATCTCAATTGGTATGAATGCAAA 59.078 33.333 5.42 0.00 0.00 3.68
2802 5481 7.428020 GCTAATCTCAATTGGTATGAATGCAA 58.572 34.615 5.42 0.00 0.00 4.08
2803 5482 6.016024 GGCTAATCTCAATTGGTATGAATGCA 60.016 38.462 5.42 0.00 0.00 3.96
2804 5483 6.016024 TGGCTAATCTCAATTGGTATGAATGC 60.016 38.462 5.42 1.76 0.00 3.56
2805 5484 7.230108 ACTGGCTAATCTCAATTGGTATGAATG 59.770 37.037 5.42 0.00 0.00 2.67
2806 5485 7.293073 ACTGGCTAATCTCAATTGGTATGAAT 58.707 34.615 5.42 0.00 0.00 2.57
2807 5486 6.662755 ACTGGCTAATCTCAATTGGTATGAA 58.337 36.000 5.42 0.00 0.00 2.57
2808 5487 6.252599 ACTGGCTAATCTCAATTGGTATGA 57.747 37.500 5.42 0.11 0.00 2.15
2809 5488 7.933577 TCTTACTGGCTAATCTCAATTGGTATG 59.066 37.037 5.42 0.00 0.00 2.39
2810 5489 7.934120 GTCTTACTGGCTAATCTCAATTGGTAT 59.066 37.037 5.42 0.00 0.00 2.73
2811 5490 7.093068 TGTCTTACTGGCTAATCTCAATTGGTA 60.093 37.037 5.42 0.00 0.00 3.25
2812 5491 6.116126 GTCTTACTGGCTAATCTCAATTGGT 58.884 40.000 5.42 0.00 0.00 3.67
2813 5492 6.115446 TGTCTTACTGGCTAATCTCAATTGG 58.885 40.000 5.42 0.00 0.00 3.16
2814 5493 7.281774 ACATGTCTTACTGGCTAATCTCAATTG 59.718 37.037 0.00 0.00 0.00 2.32
2815 5494 7.341805 ACATGTCTTACTGGCTAATCTCAATT 58.658 34.615 0.00 0.00 0.00 2.32
2816 5495 6.893583 ACATGTCTTACTGGCTAATCTCAAT 58.106 36.000 0.00 0.00 0.00 2.57
2817 5496 6.299805 ACATGTCTTACTGGCTAATCTCAA 57.700 37.500 0.00 0.00 0.00 3.02
2818 5497 5.939764 ACATGTCTTACTGGCTAATCTCA 57.060 39.130 0.00 0.00 0.00 3.27
2819 5498 6.806751 TGTACATGTCTTACTGGCTAATCTC 58.193 40.000 0.00 0.00 0.00 2.75
2820 5499 6.791867 TGTACATGTCTTACTGGCTAATCT 57.208 37.500 0.00 0.00 0.00 2.40
2821 5500 7.265673 TCTTGTACATGTCTTACTGGCTAATC 58.734 38.462 0.00 0.00 0.00 1.75
2822 5501 7.182817 TCTTGTACATGTCTTACTGGCTAAT 57.817 36.000 0.00 0.00 0.00 1.73
2823 5502 6.599356 TCTTGTACATGTCTTACTGGCTAA 57.401 37.500 0.00 0.00 0.00 3.09
2824 5503 6.791867 ATCTTGTACATGTCTTACTGGCTA 57.208 37.500 0.00 0.00 0.00 3.93
2825 5504 5.683876 ATCTTGTACATGTCTTACTGGCT 57.316 39.130 0.00 0.00 0.00 4.75
2826 5505 5.874810 TGAATCTTGTACATGTCTTACTGGC 59.125 40.000 0.00 0.00 0.00 4.85
2827 5506 7.604164 ACTTGAATCTTGTACATGTCTTACTGG 59.396 37.037 0.00 0.00 0.00 4.00
2828 5507 8.539770 ACTTGAATCTTGTACATGTCTTACTG 57.460 34.615 0.00 0.00 0.00 2.74
2890 5569 8.491045 AAAGTGAAGGATTATCCAAGGAAAAA 57.509 30.769 14.30 0.00 39.61 1.94
2891 5570 8.491045 AAAAGTGAAGGATTATCCAAGGAAAA 57.509 30.769 14.30 0.00 39.61 2.29
2892 5571 9.243105 CTAAAAGTGAAGGATTATCCAAGGAAA 57.757 33.333 14.30 0.00 39.61 3.13
2893 5572 8.611257 TCTAAAAGTGAAGGATTATCCAAGGAA 58.389 33.333 14.30 0.00 39.61 3.36
2894 5573 8.158025 TCTAAAAGTGAAGGATTATCCAAGGA 57.842 34.615 14.30 0.00 39.61 3.36
2895 5574 8.807948 TTCTAAAAGTGAAGGATTATCCAAGG 57.192 34.615 14.30 0.00 39.61 3.61
2925 5604 9.953565 ACATGTTATTACCACTACAAACTACAT 57.046 29.630 0.00 0.00 0.00 2.29
2926 5605 9.781633 AACATGTTATTACCACTACAAACTACA 57.218 29.630 9.97 0.00 0.00 2.74
2965 5644 6.309251 CGCAAACCTTTTGAGTACAAGAAAAA 59.691 34.615 2.80 0.00 37.32 1.94
2966 5645 5.802956 CGCAAACCTTTTGAGTACAAGAAAA 59.197 36.000 2.80 0.00 37.32 2.29
2967 5646 5.124138 TCGCAAACCTTTTGAGTACAAGAAA 59.876 36.000 2.80 0.00 37.32 2.52
2968 5647 4.636648 TCGCAAACCTTTTGAGTACAAGAA 59.363 37.500 2.80 0.00 37.32 2.52
2969 5648 4.193090 TCGCAAACCTTTTGAGTACAAGA 58.807 39.130 2.80 0.00 37.32 3.02
2970 5649 4.545823 TCGCAAACCTTTTGAGTACAAG 57.454 40.909 2.80 0.00 37.32 3.16
2971 5650 4.576873 TGATCGCAAACCTTTTGAGTACAA 59.423 37.500 2.80 0.00 0.00 2.41
2972 5651 4.024387 GTGATCGCAAACCTTTTGAGTACA 60.024 41.667 0.16 2.63 0.00 2.90
2973 5652 4.024387 TGTGATCGCAAACCTTTTGAGTAC 60.024 41.667 6.47 0.00 0.00 2.73
2974 5653 4.130857 TGTGATCGCAAACCTTTTGAGTA 58.869 39.130 6.47 0.00 0.00 2.59
2975 5654 2.948979 TGTGATCGCAAACCTTTTGAGT 59.051 40.909 6.47 0.00 0.00 3.41
2976 5655 3.624326 TGTGATCGCAAACCTTTTGAG 57.376 42.857 6.47 0.00 0.00 3.02
2977 5656 3.305267 CCATGTGATCGCAAACCTTTTGA 60.305 43.478 13.91 0.00 0.00 2.69
2978 5657 2.988493 CCATGTGATCGCAAACCTTTTG 59.012 45.455 13.91 4.96 0.00 2.44
2979 5658 2.627699 ACCATGTGATCGCAAACCTTTT 59.372 40.909 13.91 0.00 0.00 2.27
2980 5659 2.238521 ACCATGTGATCGCAAACCTTT 58.761 42.857 13.91 0.00 0.00 3.11
2981 5660 1.909700 ACCATGTGATCGCAAACCTT 58.090 45.000 13.91 0.00 0.00 3.50
2982 5661 1.812571 GAACCATGTGATCGCAAACCT 59.187 47.619 13.91 0.00 0.00 3.50
2983 5662 1.812571 AGAACCATGTGATCGCAAACC 59.187 47.619 13.91 1.64 0.00 3.27
2984 5663 3.559238 AAGAACCATGTGATCGCAAAC 57.441 42.857 13.91 3.60 0.00 2.93
2985 5664 5.697473 TTAAAGAACCATGTGATCGCAAA 57.303 34.783 13.91 0.00 0.00 3.68
2986 5665 5.697473 TTTAAAGAACCATGTGATCGCAA 57.303 34.783 13.91 0.00 0.00 4.85
2987 5666 5.697473 TTTTAAAGAACCATGTGATCGCA 57.303 34.783 12.12 12.12 0.00 5.10
3046 5725 5.846868 AGAGGGGAAAAAGATGGATTTCAT 58.153 37.500 0.00 0.00 37.29 2.57
3047 5726 5.275263 AGAGGGGAAAAAGATGGATTTCA 57.725 39.130 0.00 0.00 37.29 2.69
3048 5727 5.105187 CCAAGAGGGGAAAAAGATGGATTTC 60.105 44.000 0.00 0.00 35.33 2.17
3049 5728 4.779489 CCAAGAGGGGAAAAAGATGGATTT 59.221 41.667 0.00 0.00 0.00 2.17
3050 5729 4.356436 CCAAGAGGGGAAAAAGATGGATT 58.644 43.478 0.00 0.00 0.00 3.01
3051 5730 3.986435 CCAAGAGGGGAAAAAGATGGAT 58.014 45.455 0.00 0.00 0.00 3.41
3052 5731 3.456380 CCAAGAGGGGAAAAAGATGGA 57.544 47.619 0.00 0.00 0.00 3.41
3065 5744 6.321435 TGACATATATACTATCGCCCAAGAGG 59.679 42.308 0.00 0.00 39.47 3.69
3066 5745 7.334844 TGACATATATACTATCGCCCAAGAG 57.665 40.000 0.00 0.00 0.00 2.85
3067 5746 7.712204 TTGACATATATACTATCGCCCAAGA 57.288 36.000 0.00 0.00 0.00 3.02
3068 5747 8.771920 TTTTGACATATATACTATCGCCCAAG 57.228 34.615 0.00 0.00 0.00 3.61
3070 5749 9.811995 GTATTTTGACATATATACTATCGCCCA 57.188 33.333 0.00 0.00 0.00 5.36
3071 5750 9.811995 TGTATTTTGACATATATACTATCGCCC 57.188 33.333 0.00 0.00 0.00 6.13
3135 5814 9.067986 GCCTTATACACTTCCAAAAATATAGCT 57.932 33.333 0.00 0.00 0.00 3.32
3136 5815 9.067986 AGCCTTATACACTTCCAAAAATATAGC 57.932 33.333 0.00 0.00 0.00 2.97
3138 5817 9.268268 CGAGCCTTATACACTTCCAAAAATATA 57.732 33.333 0.00 0.00 0.00 0.86
3139 5818 7.990886 TCGAGCCTTATACACTTCCAAAAATAT 59.009 33.333 0.00 0.00 0.00 1.28
3140 5819 7.332557 TCGAGCCTTATACACTTCCAAAAATA 58.667 34.615 0.00 0.00 0.00 1.40
3141 5820 6.177610 TCGAGCCTTATACACTTCCAAAAAT 58.822 36.000 0.00 0.00 0.00 1.82
3142 5821 5.553123 TCGAGCCTTATACACTTCCAAAAA 58.447 37.500 0.00 0.00 0.00 1.94
3143 5822 5.155278 TCGAGCCTTATACACTTCCAAAA 57.845 39.130 0.00 0.00 0.00 2.44
3144 5823 4.811969 TCGAGCCTTATACACTTCCAAA 57.188 40.909 0.00 0.00 0.00 3.28
3145 5824 4.649674 AGATCGAGCCTTATACACTTCCAA 59.350 41.667 0.00 0.00 0.00 3.53
3146 5825 4.215908 AGATCGAGCCTTATACACTTCCA 58.784 43.478 0.00 0.00 0.00 3.53
3147 5826 4.857509 AGATCGAGCCTTATACACTTCC 57.142 45.455 0.00 0.00 0.00 3.46
3148 5827 6.375377 CAGTAGATCGAGCCTTATACACTTC 58.625 44.000 0.00 0.00 0.00 3.01
3149 5828 5.278561 GCAGTAGATCGAGCCTTATACACTT 60.279 44.000 0.00 0.00 0.00 3.16
3150 5829 4.216687 GCAGTAGATCGAGCCTTATACACT 59.783 45.833 0.00 0.00 0.00 3.55
3151 5830 4.023107 TGCAGTAGATCGAGCCTTATACAC 60.023 45.833 0.00 0.00 0.00 2.90
3152 5831 4.142038 TGCAGTAGATCGAGCCTTATACA 58.858 43.478 0.00 0.00 0.00 2.29
3153 5832 4.768130 TGCAGTAGATCGAGCCTTATAC 57.232 45.455 0.00 0.00 0.00 1.47
3154 5833 4.827835 ACTTGCAGTAGATCGAGCCTTATA 59.172 41.667 0.00 0.00 0.00 0.98
3155 5834 3.639094 ACTTGCAGTAGATCGAGCCTTAT 59.361 43.478 0.00 0.00 0.00 1.73
3156 5835 3.024547 ACTTGCAGTAGATCGAGCCTTA 58.975 45.455 0.00 0.00 0.00 2.69
3157 5836 1.827969 ACTTGCAGTAGATCGAGCCTT 59.172 47.619 0.00 0.00 0.00 4.35
3158 5837 1.479709 ACTTGCAGTAGATCGAGCCT 58.520 50.000 0.00 0.00 0.00 4.58
3159 5838 2.301577 AACTTGCAGTAGATCGAGCC 57.698 50.000 0.00 0.00 0.00 4.70
3160 5839 4.035278 ACTAACTTGCAGTAGATCGAGC 57.965 45.455 0.00 0.00 0.00 5.03
3161 5840 5.297278 ACCTACTAACTTGCAGTAGATCGAG 59.703 44.000 10.72 0.00 45.55 4.04
3162 5841 5.191426 ACCTACTAACTTGCAGTAGATCGA 58.809 41.667 10.72 0.00 45.55 3.59
3163 5842 5.502153 ACCTACTAACTTGCAGTAGATCG 57.498 43.478 10.72 0.00 45.55 3.69
3164 5843 7.804843 TCTACCTACTAACTTGCAGTAGATC 57.195 40.000 10.72 0.00 45.55 2.75
3165 5844 7.999545 TCATCTACCTACTAACTTGCAGTAGAT 59.000 37.037 10.72 11.18 45.55 1.98
3166 5845 7.344134 TCATCTACCTACTAACTTGCAGTAGA 58.656 38.462 10.72 9.60 45.55 2.59
3167 5846 7.569639 TCATCTACCTACTAACTTGCAGTAG 57.430 40.000 3.65 3.65 43.38 2.57
3168 5847 9.286170 CTATCATCTACCTACTAACTTGCAGTA 57.714 37.037 0.00 0.00 0.00 2.74
3169 5848 7.231722 CCTATCATCTACCTACTAACTTGCAGT 59.768 40.741 0.00 0.00 0.00 4.40
3170 5849 7.448777 TCCTATCATCTACCTACTAACTTGCAG 59.551 40.741 0.00 0.00 0.00 4.41
3171 5850 7.295340 TCCTATCATCTACCTACTAACTTGCA 58.705 38.462 0.00 0.00 0.00 4.08
3172 5851 7.762588 TCCTATCATCTACCTACTAACTTGC 57.237 40.000 0.00 0.00 0.00 4.01
3174 5853 9.884814 ACAATCCTATCATCTACCTACTAACTT 57.115 33.333 0.00 0.00 0.00 2.66
3179 5858 9.830186 ACATTACAATCCTATCATCTACCTACT 57.170 33.333 0.00 0.00 0.00 2.57
3206 5885 8.959548 TGCATACAGTCTATGAAATGTGAAATT 58.040 29.630 0.00 0.00 32.13 1.82
3207 5886 8.510243 TGCATACAGTCTATGAAATGTGAAAT 57.490 30.769 0.00 0.00 32.13 2.17
3208 5887 7.920160 TGCATACAGTCTATGAAATGTGAAA 57.080 32.000 0.00 0.00 32.13 2.69
3209 5888 7.607607 AGTTGCATACAGTCTATGAAATGTGAA 59.392 33.333 0.00 0.00 32.13 3.18
3210 5889 7.105588 AGTTGCATACAGTCTATGAAATGTGA 58.894 34.615 0.00 0.00 32.13 3.58
3211 5890 7.312657 AGTTGCATACAGTCTATGAAATGTG 57.687 36.000 0.00 0.00 32.13 3.21
3212 5891 7.148188 CCAAGTTGCATACAGTCTATGAAATGT 60.148 37.037 0.00 0.00 32.13 2.71
3213 5892 7.148188 ACCAAGTTGCATACAGTCTATGAAATG 60.148 37.037 0.00 0.00 0.00 2.32
3214 5893 6.886459 ACCAAGTTGCATACAGTCTATGAAAT 59.114 34.615 0.00 0.00 0.00 2.17
3215 5894 6.237901 ACCAAGTTGCATACAGTCTATGAAA 58.762 36.000 0.00 0.00 0.00 2.69
3216 5895 5.804639 ACCAAGTTGCATACAGTCTATGAA 58.195 37.500 0.00 0.00 0.00 2.57
3217 5896 5.187772 AGACCAAGTTGCATACAGTCTATGA 59.812 40.000 8.03 0.00 34.25 2.15
3218 5897 5.423015 AGACCAAGTTGCATACAGTCTATG 58.577 41.667 8.03 0.00 34.25 2.23
3219 5898 5.683876 AGACCAAGTTGCATACAGTCTAT 57.316 39.130 8.03 0.00 34.25 1.98
3220 5899 5.483685 AAGACCAAGTTGCATACAGTCTA 57.516 39.130 9.65 0.00 34.65 2.59
3221 5900 4.357918 AAGACCAAGTTGCATACAGTCT 57.642 40.909 0.00 0.95 36.21 3.24
3222 5901 5.438761 AAAAGACCAAGTTGCATACAGTC 57.561 39.130 0.00 0.00 0.00 3.51
3223 5902 5.852282 AAAAAGACCAAGTTGCATACAGT 57.148 34.783 0.00 0.00 0.00 3.55
3224 5903 8.641499 TTTTAAAAAGACCAAGTTGCATACAG 57.359 30.769 0.00 0.00 0.00 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.