Multiple sequence alignment - TraesCS4D01G044700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G044700 chr4D 100.000 4655 0 0 1 4655 20430844 20435498 0.000000e+00 8597.0
1 TraesCS4D01G044700 chr4D 90.672 729 45 11 3928 4655 20082809 20082103 0.000000e+00 948.0
2 TraesCS4D01G044700 chr4D 94.017 117 6 1 3817 3932 20083349 20083233 4.790000e-40 176.0
3 TraesCS4D01G044700 chr4A 91.448 2362 101 32 2335 4655 581198698 581200999 0.000000e+00 3149.0
4 TraesCS4D01G044700 chr4A 88.869 1132 78 24 1184 2279 581197564 581198683 0.000000e+00 1349.0
5 TraesCS4D01G044700 chr4A 88.395 405 38 6 2476 2877 666815973 666815575 3.260000e-131 479.0
6 TraesCS4D01G044700 chr4A 90.415 313 23 7 799 1106 581196724 581197034 5.610000e-109 405.0
7 TraesCS4D01G044700 chr4A 87.766 188 17 2 3470 3653 581229218 581229403 1.010000e-51 215.0
8 TraesCS4D01G044700 chr4B 91.075 1804 108 23 1349 3136 32421414 32423180 0.000000e+00 2390.0
9 TraesCS4D01G044700 chr4B 91.035 1517 60 23 3166 4655 32423180 32424647 0.000000e+00 1978.0
10 TraesCS4D01G044700 chr4B 90.015 681 41 13 3928 4600 32279151 32278490 0.000000e+00 856.0
11 TraesCS4D01G044700 chr4B 88.788 660 33 24 535 1184 32420140 32420768 0.000000e+00 771.0
12 TraesCS4D01G044700 chr4B 92.273 220 11 5 266 480 32419922 32420140 1.630000e-79 307.0
13 TraesCS4D01G044700 chr4B 82.888 187 13 7 1183 1351 32421200 32421385 2.900000e-32 150.0
14 TraesCS4D01G044700 chr2B 84.517 704 70 22 1349 2044 49636643 49637315 0.000000e+00 660.0
15 TraesCS4D01G044700 chr5A 87.547 530 55 6 3271 3798 491372569 491372049 1.850000e-168 603.0
16 TraesCS4D01G044700 chr5A 95.635 252 11 0 1 252 612895836 612895585 5.610000e-109 405.0
17 TraesCS4D01G044700 chr5A 84.444 180 20 6 3616 3793 491525703 491525530 2.230000e-38 171.0
18 TraesCS4D01G044700 chr6D 85.929 533 57 8 3269 3793 106895979 106895457 1.890000e-153 553.0
19 TraesCS4D01G044700 chr6D 97.255 255 6 1 1 254 162292638 162292892 9.250000e-117 431.0
20 TraesCS4D01G044700 chr6D 97.255 255 6 1 1 254 387590724 387590978 9.250000e-117 431.0
21 TraesCS4D01G044700 chr5D 85.343 539 62 8 3271 3798 388335465 388334933 4.100000e-150 542.0
22 TraesCS4D01G044700 chr7B 83.938 579 74 15 1349 1920 675594328 675593762 1.910000e-148 536.0
23 TraesCS4D01G044700 chr7B 77.528 267 27 13 1116 1356 675594609 675594350 3.780000e-26 130.0
24 TraesCS4D01G044700 chr3D 98.824 255 2 1 1 254 44904828 44905082 1.970000e-123 453.0
25 TraesCS4D01G044700 chr7D 98.413 252 4 0 1 252 566028763 566028512 1.190000e-120 444.0
26 TraesCS4D01G044700 chr1D 96.429 252 9 0 1 252 356941999 356942250 2.590000e-112 416.0
27 TraesCS4D01G044700 chr3A 96.078 255 9 1 1 254 629694845 629694591 9.320000e-112 414.0
28 TraesCS4D01G044700 chr5B 95.686 255 10 1 1 254 629690721 629690467 4.340000e-110 409.0
29 TraesCS4D01G044700 chr5B 97.619 42 1 0 4532 4573 658464234 658464275 6.460000e-09 73.1
30 TraesCS4D01G044700 chr6B 95.331 257 9 3 1 254 65101500 65101756 5.610000e-109 405.0
31 TraesCS4D01G044700 chr6A 83.854 384 46 8 3418 3793 130409090 130408715 7.410000e-93 351.0
32 TraesCS4D01G044700 chr6A 88.235 85 9 1 4495 4578 299336852 299336768 2.960000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G044700 chr4D 20430844 20435498 4654 False 8597.000000 8597 100.0000 1 4655 1 chr4D.!!$F1 4654
1 TraesCS4D01G044700 chr4D 20082103 20083349 1246 True 562.000000 948 92.3445 3817 4655 2 chr4D.!!$R1 838
2 TraesCS4D01G044700 chr4A 581196724 581200999 4275 False 1634.333333 3149 90.2440 799 4655 3 chr4A.!!$F2 3856
3 TraesCS4D01G044700 chr4B 32419922 32424647 4725 False 1119.200000 2390 89.2118 266 4655 5 chr4B.!!$F1 4389
4 TraesCS4D01G044700 chr4B 32278490 32279151 661 True 856.000000 856 90.0150 3928 4600 1 chr4B.!!$R1 672
5 TraesCS4D01G044700 chr2B 49636643 49637315 672 False 660.000000 660 84.5170 1349 2044 1 chr2B.!!$F1 695
6 TraesCS4D01G044700 chr5A 491372049 491372569 520 True 603.000000 603 87.5470 3271 3798 1 chr5A.!!$R1 527
7 TraesCS4D01G044700 chr6D 106895457 106895979 522 True 553.000000 553 85.9290 3269 3793 1 chr6D.!!$R1 524
8 TraesCS4D01G044700 chr5D 388334933 388335465 532 True 542.000000 542 85.3430 3271 3798 1 chr5D.!!$R1 527
9 TraesCS4D01G044700 chr7B 675593762 675594609 847 True 333.000000 536 80.7330 1116 1920 2 chr7B.!!$R1 804

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
239 240 0.041090 TGGGCAAGGGGAGATTTTCC 59.959 55.0 0.00 0.0 46.00 3.13 F
628 634 0.100861 CGCTTCCCGAGGACTAAGTC 59.899 60.0 0.00 0.0 40.02 3.01 F
629 635 0.100861 GCTTCCCGAGGACTAAGTCG 59.899 60.0 0.00 0.0 32.65 4.18 F
988 1002 0.178876 CCCACCCCATTTTCCCCTTT 60.179 55.0 0.00 0.0 0.00 3.11 F
1948 2917 0.674895 AAGGCTGATTGCGACTGACC 60.675 55.0 0.00 0.0 44.05 4.02 F
3183 4161 0.317799 ATTTGCGCACTTGAATGGCA 59.682 45.0 11.12 0.0 0.00 4.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1191 2069 0.038159 CGAGACAAGGTGGTCAGGAC 60.038 60.000 0.00 0.0 40.29 3.85 R
1940 2909 0.109689 GACTTCCAGTCGGTCAGTCG 60.110 60.000 0.00 0.0 35.28 4.18 R
2378 3354 3.409851 TTTTGCTGCAGAATCATAGCG 57.590 42.857 20.43 0.0 38.96 4.26 R
2785 3761 2.505819 GGCCTCCTTTGACCTAATCTCA 59.494 50.000 0.00 0.0 0.00 3.27 R
3223 4201 0.516439 GCTGACTGACAAGAAGCAGC 59.484 55.000 0.00 0.0 38.43 5.25 R
4279 5763 3.767230 GACGACGACGACGACCGA 61.767 66.667 25.15 0.0 42.66 4.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.203808 GAGTACTTCCTCTCTTCTCCTTTC 57.796 45.833 0.00 0.00 0.00 2.62
24 25 5.899278 AGTACTTCCTCTCTTCTCCTTTCT 58.101 41.667 0.00 0.00 0.00 2.52
25 26 5.949952 AGTACTTCCTCTCTTCTCCTTTCTC 59.050 44.000 0.00 0.00 0.00 2.87
26 27 5.010708 ACTTCCTCTCTTCTCCTTTCTCT 57.989 43.478 0.00 0.00 0.00 3.10
27 28 4.772100 ACTTCCTCTCTTCTCCTTTCTCTG 59.228 45.833 0.00 0.00 0.00 3.35
28 29 4.396357 TCCTCTCTTCTCCTTTCTCTGT 57.604 45.455 0.00 0.00 0.00 3.41
29 30 4.746466 TCCTCTCTTCTCCTTTCTCTGTT 58.254 43.478 0.00 0.00 0.00 3.16
30 31 4.526262 TCCTCTCTTCTCCTTTCTCTGTTG 59.474 45.833 0.00 0.00 0.00 3.33
31 32 4.244862 CTCTCTTCTCCTTTCTCTGTTGC 58.755 47.826 0.00 0.00 0.00 4.17
32 33 3.007398 TCTCTTCTCCTTTCTCTGTTGCC 59.993 47.826 0.00 0.00 0.00 4.52
33 34 2.975489 TCTTCTCCTTTCTCTGTTGCCT 59.025 45.455 0.00 0.00 0.00 4.75
34 35 3.392616 TCTTCTCCTTTCTCTGTTGCCTT 59.607 43.478 0.00 0.00 0.00 4.35
35 36 3.864789 TCTCCTTTCTCTGTTGCCTTT 57.135 42.857 0.00 0.00 0.00 3.11
36 37 3.744660 TCTCCTTTCTCTGTTGCCTTTC 58.255 45.455 0.00 0.00 0.00 2.62
37 38 2.481952 CTCCTTTCTCTGTTGCCTTTCG 59.518 50.000 0.00 0.00 0.00 3.46
38 39 1.068954 CCTTTCTCTGTTGCCTTTCGC 60.069 52.381 0.00 0.00 38.31 4.70
39 40 1.876156 CTTTCTCTGTTGCCTTTCGCT 59.124 47.619 0.00 0.00 38.78 4.93
40 41 1.512926 TTCTCTGTTGCCTTTCGCTC 58.487 50.000 0.00 0.00 38.78 5.03
41 42 0.681733 TCTCTGTTGCCTTTCGCTCT 59.318 50.000 0.00 0.00 38.78 4.09
42 43 1.074752 CTCTGTTGCCTTTCGCTCTC 58.925 55.000 0.00 0.00 38.78 3.20
43 44 0.667487 TCTGTTGCCTTTCGCTCTCG 60.667 55.000 0.00 0.00 38.78 4.04
44 45 2.233007 CTGTTGCCTTTCGCTCTCGC 62.233 60.000 0.00 0.00 38.78 5.03
45 46 2.029844 GTTGCCTTTCGCTCTCGCT 61.030 57.895 0.00 0.00 38.78 4.93
46 47 2.029288 TTGCCTTTCGCTCTCGCTG 61.029 57.895 0.00 0.00 38.78 5.18
47 48 3.191539 GCCTTTCGCTCTCGCTGG 61.192 66.667 0.00 0.00 35.26 4.85
48 49 3.191539 CCTTTCGCTCTCGCTGGC 61.192 66.667 0.00 0.00 35.26 4.85
49 50 2.125753 CTTTCGCTCTCGCTGGCT 60.126 61.111 0.00 0.00 35.26 4.75
50 51 2.433145 TTTCGCTCTCGCTGGCTG 60.433 61.111 0.00 0.00 35.26 4.85
51 52 3.226429 TTTCGCTCTCGCTGGCTGT 62.226 57.895 0.00 0.00 35.26 4.40
52 53 2.715532 TTTCGCTCTCGCTGGCTGTT 62.716 55.000 0.00 0.00 35.26 3.16
53 54 3.184683 CGCTCTCGCTGGCTGTTC 61.185 66.667 0.00 0.00 0.00 3.18
54 55 2.264166 GCTCTCGCTGGCTGTTCT 59.736 61.111 0.00 0.00 0.00 3.01
55 56 1.513158 GCTCTCGCTGGCTGTTCTA 59.487 57.895 0.00 0.00 0.00 2.10
56 57 0.804156 GCTCTCGCTGGCTGTTCTAC 60.804 60.000 0.00 0.00 0.00 2.59
57 58 0.524392 CTCTCGCTGGCTGTTCTACG 60.524 60.000 0.00 0.00 0.00 3.51
58 59 1.213013 CTCGCTGGCTGTTCTACGT 59.787 57.895 0.00 0.00 0.00 3.57
59 60 1.073216 CTCGCTGGCTGTTCTACGTG 61.073 60.000 0.00 0.00 0.00 4.49
60 61 2.730672 CGCTGGCTGTTCTACGTGC 61.731 63.158 0.00 0.00 0.00 5.34
61 62 2.730672 GCTGGCTGTTCTACGTGCG 61.731 63.158 0.00 0.00 0.00 5.34
62 63 1.372997 CTGGCTGTTCTACGTGCGT 60.373 57.895 0.00 2.05 0.00 5.24
63 64 1.617755 CTGGCTGTTCTACGTGCGTG 61.618 60.000 7.55 0.00 0.00 5.34
64 65 1.372499 GGCTGTTCTACGTGCGTGA 60.372 57.895 7.55 0.66 0.00 4.35
65 66 0.736325 GGCTGTTCTACGTGCGTGAT 60.736 55.000 7.55 0.00 0.00 3.06
66 67 1.468565 GGCTGTTCTACGTGCGTGATA 60.469 52.381 7.55 0.00 0.00 2.15
67 68 2.256174 GCTGTTCTACGTGCGTGATAA 58.744 47.619 7.55 0.00 0.00 1.75
68 69 2.027688 GCTGTTCTACGTGCGTGATAAC 59.972 50.000 7.55 9.00 0.00 1.89
69 70 2.244251 TGTTCTACGTGCGTGATAACG 58.756 47.619 7.55 0.00 45.15 3.18
75 76 2.288365 CGTGCGTGATAACGTGTTTT 57.712 45.000 4.14 0.00 35.13 2.43
76 77 1.959885 CGTGCGTGATAACGTGTTTTG 59.040 47.619 4.14 0.00 35.13 2.44
77 78 2.347753 CGTGCGTGATAACGTGTTTTGA 60.348 45.455 4.14 0.00 35.13 2.69
78 79 3.609475 GTGCGTGATAACGTGTTTTGAA 58.391 40.909 4.14 0.00 35.26 2.69
79 80 4.215965 GTGCGTGATAACGTGTTTTGAAT 58.784 39.130 4.14 0.00 35.26 2.57
80 81 4.317291 GTGCGTGATAACGTGTTTTGAATC 59.683 41.667 4.14 0.00 35.26 2.52
81 82 4.024809 TGCGTGATAACGTGTTTTGAATCA 60.025 37.500 4.14 0.00 35.26 2.57
82 83 4.549599 GCGTGATAACGTGTTTTGAATCAG 59.450 41.667 4.14 0.00 35.26 2.90
83 84 5.613795 GCGTGATAACGTGTTTTGAATCAGA 60.614 40.000 4.14 0.00 35.26 3.27
84 85 6.359545 CGTGATAACGTGTTTTGAATCAGAA 58.640 36.000 0.00 0.00 0.00 3.02
85 86 7.015289 CGTGATAACGTGTTTTGAATCAGAAT 58.985 34.615 0.00 0.00 0.00 2.40
86 87 7.006476 CGTGATAACGTGTTTTGAATCAGAATG 59.994 37.037 0.00 0.00 37.54 2.67
104 105 8.441312 TCAGAATGATTGAATTGATTGATCGA 57.559 30.769 0.00 0.00 42.56 3.59
105 106 9.063615 TCAGAATGATTGAATTGATTGATCGAT 57.936 29.630 0.00 0.00 42.56 3.59
106 107 9.118236 CAGAATGATTGAATTGATTGATCGATG 57.882 33.333 0.54 0.00 39.69 3.84
107 108 8.297426 AGAATGATTGAATTGATTGATCGATGG 58.703 33.333 0.54 0.00 31.38 3.51
108 109 6.947644 TGATTGAATTGATTGATCGATGGT 57.052 33.333 0.54 0.00 31.38 3.55
109 110 7.337480 TGATTGAATTGATTGATCGATGGTT 57.663 32.000 0.54 0.00 31.38 3.67
110 111 8.449251 TGATTGAATTGATTGATCGATGGTTA 57.551 30.769 0.54 0.00 31.38 2.85
111 112 8.344831 TGATTGAATTGATTGATCGATGGTTAC 58.655 33.333 0.54 0.00 31.38 2.50
112 113 7.622893 TTGAATTGATTGATCGATGGTTACA 57.377 32.000 0.54 0.00 31.38 2.41
113 114 7.250445 TGAATTGATTGATCGATGGTTACAG 57.750 36.000 0.54 0.00 31.38 2.74
114 115 6.260714 TGAATTGATTGATCGATGGTTACAGG 59.739 38.462 0.54 0.00 31.38 4.00
115 116 3.466836 TGATTGATCGATGGTTACAGGC 58.533 45.455 0.54 0.00 0.00 4.85
116 117 2.325583 TTGATCGATGGTTACAGGCC 57.674 50.000 0.54 0.00 0.00 5.19
117 118 0.468226 TGATCGATGGTTACAGGCCC 59.532 55.000 0.54 0.00 0.00 5.80
118 119 0.250338 GATCGATGGTTACAGGCCCC 60.250 60.000 0.54 0.00 0.00 5.80
119 120 1.705997 ATCGATGGTTACAGGCCCCC 61.706 60.000 0.00 0.00 0.00 5.40
120 121 2.375345 CGATGGTTACAGGCCCCCT 61.375 63.158 0.00 0.00 0.00 4.79
121 122 1.921869 CGATGGTTACAGGCCCCCTT 61.922 60.000 0.00 0.00 0.00 3.95
122 123 0.335019 GATGGTTACAGGCCCCCTTT 59.665 55.000 0.00 0.00 0.00 3.11
123 124 0.790339 ATGGTTACAGGCCCCCTTTT 59.210 50.000 0.00 0.00 0.00 2.27
124 125 1.458017 TGGTTACAGGCCCCCTTTTA 58.542 50.000 0.00 0.00 0.00 1.52
125 126 2.004589 TGGTTACAGGCCCCCTTTTAT 58.995 47.619 0.00 0.00 0.00 1.40
126 127 3.199671 TGGTTACAGGCCCCCTTTTATA 58.800 45.455 0.00 0.00 0.00 0.98
127 128 3.794971 TGGTTACAGGCCCCCTTTTATAT 59.205 43.478 0.00 0.00 0.00 0.86
128 129 4.149598 GGTTACAGGCCCCCTTTTATATG 58.850 47.826 0.00 0.00 0.00 1.78
129 130 4.387098 GGTTACAGGCCCCCTTTTATATGT 60.387 45.833 0.00 0.00 0.00 2.29
130 131 3.595190 ACAGGCCCCCTTTTATATGTC 57.405 47.619 0.00 0.00 0.00 3.06
131 132 2.177016 ACAGGCCCCCTTTTATATGTCC 59.823 50.000 0.00 0.00 0.00 4.02
132 133 1.787058 AGGCCCCCTTTTATATGTCCC 59.213 52.381 0.00 0.00 0.00 4.46
133 134 1.546998 GGCCCCCTTTTATATGTCCCG 60.547 57.143 0.00 0.00 0.00 5.14
134 135 1.422402 GCCCCCTTTTATATGTCCCGA 59.578 52.381 0.00 0.00 0.00 5.14
135 136 2.158579 GCCCCCTTTTATATGTCCCGAA 60.159 50.000 0.00 0.00 0.00 4.30
136 137 3.751518 CCCCCTTTTATATGTCCCGAAG 58.248 50.000 0.00 0.00 0.00 3.79
137 138 3.393278 CCCCCTTTTATATGTCCCGAAGA 59.607 47.826 0.00 0.00 0.00 2.87
138 139 4.505039 CCCCCTTTTATATGTCCCGAAGAG 60.505 50.000 0.00 0.00 0.00 2.85
139 140 4.347000 CCCCTTTTATATGTCCCGAAGAGA 59.653 45.833 0.00 0.00 0.00 3.10
140 141 5.298347 CCCTTTTATATGTCCCGAAGAGAC 58.702 45.833 0.00 0.00 35.15 3.36
144 145 4.486887 TGTCCCGAAGAGACACGA 57.513 55.556 0.00 0.00 41.29 4.35
145 146 1.954528 TGTCCCGAAGAGACACGAC 59.045 57.895 0.00 0.00 41.29 4.34
146 147 1.154263 GTCCCGAAGAGACACGACG 60.154 63.158 0.00 0.00 34.53 5.12
147 148 1.301953 TCCCGAAGAGACACGACGA 60.302 57.895 0.00 0.00 0.00 4.20
148 149 0.675837 TCCCGAAGAGACACGACGAT 60.676 55.000 0.00 0.00 0.00 3.73
149 150 0.248134 CCCGAAGAGACACGACGATC 60.248 60.000 0.00 0.00 0.00 3.69
150 151 0.248134 CCGAAGAGACACGACGATCC 60.248 60.000 0.00 0.00 0.00 3.36
151 152 0.248134 CGAAGAGACACGACGATCCC 60.248 60.000 0.00 0.00 0.00 3.85
152 153 1.096416 GAAGAGACACGACGATCCCT 58.904 55.000 0.00 0.00 0.00 4.20
153 154 1.064357 GAAGAGACACGACGATCCCTC 59.936 57.143 0.00 2.69 0.00 4.30
168 169 3.441290 CTCGAGGAGGCGTCGGTT 61.441 66.667 3.91 0.00 41.23 4.44
169 170 3.398353 CTCGAGGAGGCGTCGGTTC 62.398 68.421 3.91 0.00 41.23 3.62
170 171 4.493747 CGAGGAGGCGTCGGTTCC 62.494 72.222 0.00 0.00 37.97 3.62
171 172 3.379445 GAGGAGGCGTCGGTTCCA 61.379 66.667 0.00 0.00 33.32 3.53
172 173 3.358076 GAGGAGGCGTCGGTTCCAG 62.358 68.421 0.00 0.00 33.32 3.86
173 174 4.452733 GGAGGCGTCGGTTCCAGG 62.453 72.222 0.00 0.00 0.00 4.45
174 175 3.379445 GAGGCGTCGGTTCCAGGA 61.379 66.667 0.00 0.00 0.00 3.86
175 176 3.358076 GAGGCGTCGGTTCCAGGAG 62.358 68.421 0.00 0.00 0.00 3.69
176 177 3.379445 GGCGTCGGTTCCAGGAGA 61.379 66.667 0.00 0.00 0.00 3.71
177 178 2.722201 GGCGTCGGTTCCAGGAGAT 61.722 63.158 0.00 0.00 0.00 2.75
178 179 1.227002 GCGTCGGTTCCAGGAGATC 60.227 63.158 0.00 0.00 0.00 2.75
179 180 1.064296 CGTCGGTTCCAGGAGATCG 59.936 63.158 0.00 0.00 0.00 3.69
180 181 1.374343 CGTCGGTTCCAGGAGATCGA 61.374 60.000 6.73 6.73 0.00 3.59
181 182 0.815734 GTCGGTTCCAGGAGATCGAA 59.184 55.000 11.01 0.00 34.03 3.71
182 183 1.103803 TCGGTTCCAGGAGATCGAAG 58.896 55.000 7.99 0.00 30.77 3.79
183 184 0.103208 CGGTTCCAGGAGATCGAAGG 59.897 60.000 0.00 0.00 0.00 3.46
184 185 0.466124 GGTTCCAGGAGATCGAAGGG 59.534 60.000 0.00 0.00 0.00 3.95
185 186 1.486211 GTTCCAGGAGATCGAAGGGA 58.514 55.000 0.00 0.00 0.00 4.20
186 187 1.410882 GTTCCAGGAGATCGAAGGGAG 59.589 57.143 0.00 0.00 0.00 4.30
187 188 0.927029 TCCAGGAGATCGAAGGGAGA 59.073 55.000 0.00 0.00 0.00 3.71
188 189 1.036707 CCAGGAGATCGAAGGGAGAC 58.963 60.000 0.00 0.00 0.00 3.36
189 190 0.665835 CAGGAGATCGAAGGGAGACG 59.334 60.000 0.00 0.00 0.00 4.18
190 191 0.256464 AGGAGATCGAAGGGAGACGT 59.744 55.000 0.00 0.00 0.00 4.34
191 192 0.664224 GGAGATCGAAGGGAGACGTC 59.336 60.000 7.70 7.70 0.00 4.34
194 195 1.375098 GATCGAAGGGAGACGTCGGT 61.375 60.000 10.46 0.00 46.95 4.69
195 196 2.880187 GATCGAAGGGAGACGTCGGTT 61.880 57.143 10.46 2.14 44.36 4.44
196 197 1.443872 CGAAGGGAGACGTCGGTTG 60.444 63.158 10.46 0.00 45.41 3.77
197 198 1.737008 GAAGGGAGACGTCGGTTGC 60.737 63.158 10.46 0.00 0.00 4.17
198 199 3.569049 AAGGGAGACGTCGGTTGCG 62.569 63.158 10.46 0.00 0.00 4.85
201 202 4.047059 GAGACGTCGGTTGCGGGA 62.047 66.667 10.46 0.00 0.00 5.14
202 203 4.353437 AGACGTCGGTTGCGGGAC 62.353 66.667 10.46 0.00 0.00 4.46
203 204 4.651008 GACGTCGGTTGCGGGACA 62.651 66.667 0.00 0.00 32.74 4.02
204 205 4.224274 ACGTCGGTTGCGGGACAA 62.224 61.111 0.00 0.00 35.33 3.18
205 206 2.968156 CGTCGGTTGCGGGACAAA 60.968 61.111 0.00 0.00 40.82 2.83
206 207 2.635338 GTCGGTTGCGGGACAAAC 59.365 61.111 0.00 0.00 42.97 2.93
207 208 2.592287 TCGGTTGCGGGACAAACC 60.592 61.111 0.00 0.00 43.54 3.27
215 216 2.635338 GGGACAAACCGCAACGAC 59.365 61.111 0.00 0.00 40.11 4.34
216 217 2.247267 GGACAAACCGCAACGACG 59.753 61.111 0.00 0.00 0.00 5.12
224 225 4.676586 CGCAACGACGGTTTGGGC 62.677 66.667 0.00 0.00 32.98 5.36
225 226 3.587933 GCAACGACGGTTTGGGCA 61.588 61.111 0.00 0.00 32.98 5.36
226 227 3.111939 CAACGACGGTTTGGGCAA 58.888 55.556 0.00 0.00 32.98 4.52
227 228 1.008995 CAACGACGGTTTGGGCAAG 60.009 57.895 0.00 0.00 32.98 4.01
228 229 2.190841 AACGACGGTTTGGGCAAGG 61.191 57.895 0.00 0.00 30.42 3.61
229 230 3.361977 CGACGGTTTGGGCAAGGG 61.362 66.667 0.00 0.00 0.00 3.95
230 231 2.989253 GACGGTTTGGGCAAGGGG 60.989 66.667 0.00 0.00 0.00 4.79
231 232 3.501040 GACGGTTTGGGCAAGGGGA 62.501 63.158 0.00 0.00 0.00 4.81
232 233 2.676471 CGGTTTGGGCAAGGGGAG 60.676 66.667 0.00 0.00 0.00 4.30
233 234 2.851045 GGTTTGGGCAAGGGGAGA 59.149 61.111 0.00 0.00 0.00 3.71
234 235 1.388133 GGTTTGGGCAAGGGGAGAT 59.612 57.895 0.00 0.00 0.00 2.75
235 236 0.252239 GGTTTGGGCAAGGGGAGATT 60.252 55.000 0.00 0.00 0.00 2.40
236 237 1.644509 GTTTGGGCAAGGGGAGATTT 58.355 50.000 0.00 0.00 0.00 2.17
237 238 1.977854 GTTTGGGCAAGGGGAGATTTT 59.022 47.619 0.00 0.00 0.00 1.82
238 239 1.937191 TTGGGCAAGGGGAGATTTTC 58.063 50.000 0.00 0.00 0.00 2.29
239 240 0.041090 TGGGCAAGGGGAGATTTTCC 59.959 55.000 0.00 0.00 46.00 3.13
255 256 8.758829 GGAGATTTTCCCCTAATTACAAATTGT 58.241 33.333 3.43 3.43 40.37 2.71
289 292 5.262588 ACACATACATAGACGAAGCATGA 57.737 39.130 0.00 0.00 0.00 3.07
300 303 1.269413 CGAAGCATGAAATGGATGGCC 60.269 52.381 0.00 0.00 46.86 5.36
320 323 2.149578 CACCTTGTCTTGAGCCTCTTG 58.850 52.381 0.00 0.00 0.00 3.02
330 333 6.436218 TGTCTTGAGCCTCTTGTGTAATACTA 59.564 38.462 0.00 0.00 0.00 1.82
363 369 4.630894 TTGCTGTCTTTGGTAACTGTTG 57.369 40.909 2.69 0.00 37.61 3.33
367 373 5.825679 TGCTGTCTTTGGTAACTGTTGTATT 59.174 36.000 2.69 0.00 37.61 1.89
375 381 5.484715 TGGTAACTGTTGTATTAGCCTCAC 58.515 41.667 2.69 0.00 37.61 3.51
489 495 8.654230 TTTAGAGATGCATCTAGTTTGTCATC 57.346 34.615 28.78 12.53 37.25 2.92
490 496 6.482898 AGAGATGCATCTAGTTTGTCATCT 57.517 37.500 28.78 14.56 38.97 2.90
491 497 7.594351 AGAGATGCATCTAGTTTGTCATCTA 57.406 36.000 28.78 0.00 37.71 1.98
492 498 8.192743 AGAGATGCATCTAGTTTGTCATCTAT 57.807 34.615 28.78 17.99 37.71 1.98
493 499 8.089597 AGAGATGCATCTAGTTTGTCATCTATG 58.910 37.037 28.78 6.12 37.71 2.23
494 500 7.733969 AGATGCATCTAGTTTGTCATCTATGT 58.266 34.615 27.73 0.00 36.79 2.29
495 501 8.209584 AGATGCATCTAGTTTGTCATCTATGTT 58.790 33.333 27.73 0.00 36.79 2.71
496 502 7.776933 TGCATCTAGTTTGTCATCTATGTTC 57.223 36.000 0.00 0.00 0.00 3.18
497 503 7.330262 TGCATCTAGTTTGTCATCTATGTTCA 58.670 34.615 0.00 0.00 0.00 3.18
498 504 7.493645 TGCATCTAGTTTGTCATCTATGTTCAG 59.506 37.037 0.00 0.00 0.00 3.02
499 505 7.493971 GCATCTAGTTTGTCATCTATGTTCAGT 59.506 37.037 0.00 0.00 0.00 3.41
500 506 9.376075 CATCTAGTTTGTCATCTATGTTCAGTT 57.624 33.333 0.00 0.00 0.00 3.16
505 511 9.896645 AGTTTGTCATCTATGTTCAGTTATGAT 57.103 29.630 0.00 0.00 34.73 2.45
526 532 7.966246 TGATTAATTTGCTTGAAATTGCACT 57.034 28.000 0.00 0.00 42.98 4.40
527 533 8.380743 TGATTAATTTGCTTGAAATTGCACTT 57.619 26.923 0.00 0.00 42.98 3.16
528 534 8.283992 TGATTAATTTGCTTGAAATTGCACTTG 58.716 29.630 0.00 0.00 42.98 3.16
529 535 7.783090 TTAATTTGCTTGAAATTGCACTTGA 57.217 28.000 0.00 0.00 42.98 3.02
530 536 6.870971 AATTTGCTTGAAATTGCACTTGAT 57.129 29.167 0.00 0.00 41.79 2.57
531 537 5.660629 TTTGCTTGAAATTGCACTTGATG 57.339 34.783 0.00 0.00 39.05 3.07
532 538 4.587584 TGCTTGAAATTGCACTTGATGA 57.412 36.364 0.00 0.00 33.94 2.92
533 539 4.552355 TGCTTGAAATTGCACTTGATGAG 58.448 39.130 0.00 0.00 33.94 2.90
534 540 4.278919 TGCTTGAAATTGCACTTGATGAGA 59.721 37.500 0.00 0.00 33.94 3.27
535 541 5.221283 TGCTTGAAATTGCACTTGATGAGAA 60.221 36.000 0.00 0.00 33.94 2.87
536 542 5.693104 GCTTGAAATTGCACTTGATGAGAAA 59.307 36.000 0.00 0.00 0.00 2.52
537 543 6.128902 GCTTGAAATTGCACTTGATGAGAAAG 60.129 38.462 0.00 0.00 0.00 2.62
538 544 5.224888 TGAAATTGCACTTGATGAGAAAGC 58.775 37.500 0.00 0.00 0.00 3.51
539 545 2.975410 TTGCACTTGATGAGAAAGCG 57.025 45.000 0.00 0.00 0.00 4.68
540 546 1.882912 TGCACTTGATGAGAAAGCGT 58.117 45.000 0.00 0.00 0.00 5.07
541 547 2.221169 TGCACTTGATGAGAAAGCGTT 58.779 42.857 0.00 0.00 0.00 4.84
542 548 2.618241 TGCACTTGATGAGAAAGCGTTT 59.382 40.909 0.00 0.00 0.00 3.60
543 549 3.812609 TGCACTTGATGAGAAAGCGTTTA 59.187 39.130 0.00 0.00 0.00 2.01
544 550 4.455533 TGCACTTGATGAGAAAGCGTTTAT 59.544 37.500 0.00 0.00 0.00 1.40
584 590 9.265901 CCTACCTGTATATGTCTGAATCTTTTG 57.734 37.037 0.00 0.00 0.00 2.44
600 606 3.072915 TCTTTTGACTTGCTCAGGATGGA 59.927 43.478 0.00 0.00 36.16 3.41
610 616 1.818060 CTCAGGATGGAGCTAGATCCG 59.182 57.143 21.63 7.49 42.73 4.18
611 617 0.246086 CAGGATGGAGCTAGATCCGC 59.754 60.000 21.63 15.59 42.73 5.54
613 619 0.972883 GGATGGAGCTAGATCCGCTT 59.027 55.000 21.63 9.42 42.77 4.68
614 620 1.067213 GGATGGAGCTAGATCCGCTTC 60.067 57.143 21.63 16.89 42.77 3.86
615 621 0.972883 ATGGAGCTAGATCCGCTTCC 59.027 55.000 21.63 11.17 42.77 3.46
617 623 1.287503 GAGCTAGATCCGCTTCCCG 59.712 63.158 8.35 0.00 37.96 5.14
618 624 1.152735 AGCTAGATCCGCTTCCCGA 60.153 57.895 0.00 0.00 40.02 5.14
619 625 1.175983 AGCTAGATCCGCTTCCCGAG 61.176 60.000 0.00 0.00 40.02 4.63
620 626 1.960612 CTAGATCCGCTTCCCGAGG 59.039 63.158 0.00 0.00 40.02 4.63
621 627 0.537600 CTAGATCCGCTTCCCGAGGA 60.538 60.000 0.00 0.00 46.06 3.71
622 628 0.822532 TAGATCCGCTTCCCGAGGAC 60.823 60.000 0.00 0.00 44.76 3.85
623 629 2.042843 ATCCGCTTCCCGAGGACT 60.043 61.111 0.00 0.00 44.76 3.85
624 630 0.822532 GATCCGCTTCCCGAGGACTA 60.823 60.000 0.00 0.00 44.76 2.59
625 631 0.396695 ATCCGCTTCCCGAGGACTAA 60.397 55.000 0.00 0.00 44.76 2.24
626 632 1.035932 TCCGCTTCCCGAGGACTAAG 61.036 60.000 0.00 0.00 36.61 2.18
628 634 0.100861 CGCTTCCCGAGGACTAAGTC 59.899 60.000 0.00 0.00 40.02 3.01
629 635 0.100861 GCTTCCCGAGGACTAAGTCG 59.899 60.000 0.00 0.00 32.65 4.18
630 636 1.747709 CTTCCCGAGGACTAAGTCGA 58.252 55.000 0.00 0.00 38.50 4.20
631 637 1.671845 CTTCCCGAGGACTAAGTCGAG 59.328 57.143 0.00 0.00 38.50 4.04
632 638 0.747283 TCCCGAGGACTAAGTCGAGC 60.747 60.000 0.00 0.00 38.50 5.03
633 639 0.748729 CCCGAGGACTAAGTCGAGCT 60.749 60.000 0.00 0.00 38.50 4.09
634 640 0.378962 CCGAGGACTAAGTCGAGCTG 59.621 60.000 0.00 0.00 38.50 4.24
635 641 0.378962 CGAGGACTAAGTCGAGCTGG 59.621 60.000 0.00 0.00 38.50 4.85
636 642 1.465794 GAGGACTAAGTCGAGCTGGT 58.534 55.000 0.00 0.00 32.65 4.00
637 643 1.402613 GAGGACTAAGTCGAGCTGGTC 59.597 57.143 0.00 0.00 32.65 4.02
638 644 1.174783 GGACTAAGTCGAGCTGGTCA 58.825 55.000 7.70 0.00 34.59 4.02
639 645 1.135344 GGACTAAGTCGAGCTGGTCAC 60.135 57.143 7.70 4.76 34.59 3.67
701 707 1.287503 GATTTGGCGCGTTTTGGGA 59.712 52.632 8.43 0.00 0.00 4.37
757 771 3.812577 GCAATGGGCCTAAACACAC 57.187 52.632 4.53 0.00 36.11 3.82
758 772 0.965439 GCAATGGGCCTAAACACACA 59.035 50.000 4.53 0.00 36.11 3.72
759 773 1.067635 GCAATGGGCCTAAACACACAG 60.068 52.381 4.53 0.00 36.11 3.66
760 774 2.238521 CAATGGGCCTAAACACACAGT 58.761 47.619 4.53 0.00 0.00 3.55
761 775 3.417101 CAATGGGCCTAAACACACAGTA 58.583 45.455 4.53 0.00 0.00 2.74
762 776 3.799432 ATGGGCCTAAACACACAGTAA 57.201 42.857 4.53 0.00 0.00 2.24
763 777 3.799432 TGGGCCTAAACACACAGTAAT 57.201 42.857 4.53 0.00 0.00 1.89
764 778 4.912317 TGGGCCTAAACACACAGTAATA 57.088 40.909 4.53 0.00 0.00 0.98
765 779 5.244189 TGGGCCTAAACACACAGTAATAA 57.756 39.130 4.53 0.00 0.00 1.40
766 780 5.822204 TGGGCCTAAACACACAGTAATAAT 58.178 37.500 4.53 0.00 0.00 1.28
767 781 5.883673 TGGGCCTAAACACACAGTAATAATC 59.116 40.000 4.53 0.00 0.00 1.75
768 782 5.883673 GGGCCTAAACACACAGTAATAATCA 59.116 40.000 0.84 0.00 0.00 2.57
769 783 6.183360 GGGCCTAAACACACAGTAATAATCAC 60.183 42.308 0.84 0.00 0.00 3.06
770 784 6.598064 GGCCTAAACACACAGTAATAATCACT 59.402 38.462 0.00 0.00 0.00 3.41
771 785 7.767198 GGCCTAAACACACAGTAATAATCACTA 59.233 37.037 0.00 0.00 0.00 2.74
772 786 8.818057 GCCTAAACACACAGTAATAATCACTAG 58.182 37.037 0.00 0.00 0.00 2.57
773 787 9.871238 CCTAAACACACAGTAATAATCACTAGT 57.129 33.333 0.00 0.00 0.00 2.57
882 896 2.277084 GGAAATCCACGCGTCACTAAT 58.723 47.619 9.86 0.00 35.64 1.73
988 1002 0.178876 CCCACCCCATTTTCCCCTTT 60.179 55.000 0.00 0.00 0.00 3.11
1181 1217 1.290732 CCCCAATTCCACCAACCCTAT 59.709 52.381 0.00 0.00 0.00 2.57
1191 2069 0.819259 CCAACCCTATGCCGTCATGG 60.819 60.000 0.00 0.00 42.50 3.66
1247 2125 1.137513 CGTCCTCAACTTCGTCAACC 58.862 55.000 0.00 0.00 0.00 3.77
1308 2201 2.764128 CTGCCTCCGCTTAGGGGA 60.764 66.667 17.16 17.16 46.06 4.81
1328 2221 3.964875 AACCTTGTGCTTGCCGCG 61.965 61.111 0.00 0.00 43.27 6.46
1421 2356 2.888594 TCTGTACCAAACGATGCTAGC 58.111 47.619 8.10 8.10 0.00 3.42
1443 2378 1.308783 GGTTCTGCCTAAGTGCCTGC 61.309 60.000 0.00 0.00 0.00 4.85
1460 2395 4.576053 TGCCTGCTATACATGTTCAATGTC 59.424 41.667 2.30 0.00 33.76 3.06
1475 2410 1.656652 ATGTCAGGAGCGTGTATTGC 58.343 50.000 0.00 0.00 0.00 3.56
1476 2411 0.735978 TGTCAGGAGCGTGTATTGCG 60.736 55.000 0.00 0.00 37.44 4.85
1477 2412 1.153647 TCAGGAGCGTGTATTGCGG 60.154 57.895 0.00 0.00 37.44 5.69
1478 2413 2.511600 AGGAGCGTGTATTGCGGC 60.512 61.111 0.00 0.00 37.44 6.53
1480 2415 2.180204 GGAGCGTGTATTGCGGCAT 61.180 57.895 2.28 0.00 37.44 4.40
1481 2416 0.878523 GGAGCGTGTATTGCGGCATA 60.879 55.000 2.28 0.00 37.44 3.14
1482 2417 1.148310 GAGCGTGTATTGCGGCATAT 58.852 50.000 2.28 3.25 37.44 1.78
1483 2418 0.867746 AGCGTGTATTGCGGCATATG 59.132 50.000 2.28 0.00 37.44 1.78
1485 2443 1.262950 GCGTGTATTGCGGCATATGAA 59.737 47.619 6.97 0.00 0.00 2.57
1490 2448 2.936919 ATTGCGGCATATGAAGGAGA 57.063 45.000 6.97 0.00 0.00 3.71
1491 2449 2.936919 TTGCGGCATATGAAGGAGAT 57.063 45.000 6.97 0.00 0.00 2.75
1504 2462 4.876125 TGAAGGAGATGATGATTAGTCGC 58.124 43.478 0.00 0.00 0.00 5.19
1505 2463 4.342092 TGAAGGAGATGATGATTAGTCGCA 59.658 41.667 0.00 0.00 0.00 5.10
1572 2531 3.064207 TGTCATCCGTAGTTGCTTTGTC 58.936 45.455 0.00 0.00 0.00 3.18
1647 2608 4.389992 CAGATAATCGGTCTATGCGCATTT 59.610 41.667 30.42 16.89 0.00 2.32
1652 2613 2.287644 TCGGTCTATGCGCATTTCATTG 59.712 45.455 30.42 14.32 0.00 2.82
1666 2627 7.114920 CGCATTTCATTGCTTTGTTTATCATC 58.885 34.615 0.00 0.00 40.54 2.92
1668 2629 7.201461 GCATTTCATTGCTTTGTTTATCATCGT 60.201 33.333 0.00 0.00 39.57 3.73
1679 2640 6.223138 TGTTTATCATCGTGTTGACAGAAC 57.777 37.500 0.00 0.00 0.00 3.01
1686 2647 3.804036 TCGTGTTGACAGAACTCCAAAT 58.196 40.909 0.00 0.00 0.00 2.32
1699 2660 4.623932 ACTCCAAATGACTGAAGCTGTA 57.376 40.909 0.00 0.00 0.00 2.74
1731 2693 4.023707 CAGTTCACACCTGTCTTTGGAATC 60.024 45.833 0.00 0.00 0.00 2.52
1760 2722 7.065923 GTGGTGGTTCCTAAGATTGAATAGTTC 59.934 40.741 0.00 0.00 37.07 3.01
1763 2725 8.041323 GTGGTTCCTAAGATTGAATAGTTCTCA 58.959 37.037 0.00 0.00 0.00 3.27
1833 2796 5.382303 CGGATGTTTCAATGTAGTCAACAC 58.618 41.667 0.00 0.00 42.09 3.32
1940 2909 4.615588 AGTATCCTCTAAGGCTGATTGC 57.384 45.455 0.00 0.00 41.94 3.56
1941 2910 2.540265 ATCCTCTAAGGCTGATTGCG 57.460 50.000 0.00 0.00 44.05 4.85
1942 2911 1.485124 TCCTCTAAGGCTGATTGCGA 58.515 50.000 0.00 0.00 44.05 5.10
1943 2912 1.137086 TCCTCTAAGGCTGATTGCGAC 59.863 52.381 0.00 0.00 44.05 5.19
1944 2913 1.137872 CCTCTAAGGCTGATTGCGACT 59.862 52.381 0.00 0.00 44.05 4.18
1945 2914 2.200067 CTCTAAGGCTGATTGCGACTG 58.800 52.381 0.00 0.00 44.05 3.51
1946 2915 1.824852 TCTAAGGCTGATTGCGACTGA 59.175 47.619 0.00 0.00 44.05 3.41
1947 2916 1.929836 CTAAGGCTGATTGCGACTGAC 59.070 52.381 0.00 0.00 44.05 3.51
1948 2917 0.674895 AAGGCTGATTGCGACTGACC 60.675 55.000 0.00 0.00 44.05 4.02
2020 2989 9.686683 ATAAATTTTGCACTCTTCAGTATAGGT 57.313 29.630 0.00 0.00 0.00 3.08
2021 2990 7.617041 AATTTTGCACTCTTCAGTATAGGTC 57.383 36.000 0.00 0.00 0.00 3.85
2147 3116 5.547465 TCATCTTTAGTTTCACACCGATGT 58.453 37.500 0.00 0.00 40.80 3.06
2175 3144 4.866508 TTCAGACACCGTTCTTACATCT 57.133 40.909 0.00 0.00 0.00 2.90
2292 3261 6.986817 AGATGAATTAAGTGGTCGGTTAGATG 59.013 38.462 0.00 0.00 0.00 2.90
2294 3263 6.103997 TGAATTAAGTGGTCGGTTAGATGAC 58.896 40.000 0.00 0.00 0.00 3.06
2326 3295 2.094182 TCCGTCTCCACTCTATGTTTGC 60.094 50.000 0.00 0.00 0.00 3.68
2330 3299 4.142359 CGTCTCCACTCTATGTTTGCTACT 60.142 45.833 0.00 0.00 0.00 2.57
2378 3354 6.471146 AGGCAATAATGATGAGTGGACTATC 58.529 40.000 0.00 0.00 0.00 2.08
2495 3471 1.317431 TGGATGCATTGGCTGACAGC 61.317 55.000 19.55 19.55 41.91 4.40
2876 3852 4.016444 ACATGAGTGTGTTTGTTCAACCT 58.984 39.130 0.00 0.00 37.14 3.50
2903 3879 1.726853 ACGGCAGAGCTCATGTTTAC 58.273 50.000 17.77 0.00 0.00 2.01
3063 4039 6.156949 TCAAGGAGCTATGGGATAATATCACC 59.843 42.308 0.00 1.00 0.00 4.02
3140 4118 7.367285 TGTTTTACCTGACACTTGATTAATGC 58.633 34.615 0.00 0.00 0.00 3.56
3148 4126 9.223099 CCTGACACTTGATTAATGCATATATGA 57.777 33.333 17.10 2.36 0.00 2.15
3183 4161 0.317799 ATTTGCGCACTTGAATGGCA 59.682 45.000 11.12 0.00 0.00 4.92
3200 4178 1.829222 GGCAGGCTGTAACTGGTAGTA 59.171 52.381 17.16 0.00 36.48 1.82
3204 4182 4.495422 CAGGCTGTAACTGGTAGTAGTTG 58.505 47.826 6.28 0.00 40.85 3.16
3205 4183 4.021368 CAGGCTGTAACTGGTAGTAGTTGT 60.021 45.833 6.28 0.00 40.85 3.32
3206 4184 4.591924 AGGCTGTAACTGGTAGTAGTTGTT 59.408 41.667 0.00 0.00 40.85 2.83
3218 4196 7.867752 TGGTAGTAGTTGTTTAGTTCATTTGC 58.132 34.615 0.00 0.00 0.00 3.68
3223 4201 5.510671 AGTTGTTTAGTTCATTTGCTGTCG 58.489 37.500 0.00 0.00 0.00 4.35
3247 4225 3.137533 GCTTCTTGTCAGTCAGCTTTCT 58.862 45.455 0.00 0.00 0.00 2.52
3443 4424 6.244654 TGGGAGTATCTCAGATCAGATGTAG 58.755 44.000 5.94 0.00 43.69 2.74
3444 4425 6.183361 TGGGAGTATCTCAGATCAGATGTAGT 60.183 42.308 5.94 0.00 43.69 2.73
3445 4426 7.017651 TGGGAGTATCTCAGATCAGATGTAGTA 59.982 40.741 5.94 0.00 43.69 1.82
3446 4427 8.052748 GGGAGTATCTCAGATCAGATGTAGTAT 58.947 40.741 5.94 0.00 33.91 2.12
3477 4480 4.217118 CAGTTTTATCAGCCAAACAGCTCT 59.783 41.667 0.00 0.00 42.61 4.09
3486 4489 4.458989 CAGCCAAACAGCTCTATGGTTTTA 59.541 41.667 9.32 0.00 42.61 1.52
3504 4507 5.123502 GGTTTTACTAGTTTCTTAGGCAGGC 59.876 44.000 0.00 0.00 0.00 4.85
3508 4511 0.321653 AGTTTCTTAGGCAGGCCGTG 60.322 55.000 4.37 0.00 41.95 4.94
3554 4566 3.452755 TGTTCGTCCGCTGATGATAAT 57.547 42.857 0.50 0.00 36.43 1.28
3569 4589 7.282332 TGATGATAATATATCTGCTCCGAGG 57.718 40.000 0.00 0.00 0.00 4.63
3584 4604 1.600023 CGAGGACTCTAGCTGGTAGG 58.400 60.000 13.43 7.29 0.00 3.18
3697 4719 7.459486 GTCTTATCACTGACAACATAAGCTTG 58.541 38.462 9.86 0.00 33.75 4.01
3821 4847 6.980051 TGATCTGCAATATATAGCTGCAAG 57.020 37.500 18.11 13.64 44.94 4.01
3966 5438 1.807573 CCTGCTCTTCTCCGCGTTC 60.808 63.158 4.92 0.00 0.00 3.95
4186 5670 2.802667 CGTGGCAGCCGATTCGAAG 61.803 63.158 7.03 0.00 0.00 3.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.949952 AGAAAGGAGAAGAGAGGAAGTACTC 59.050 44.000 0.00 0.00 37.77 2.59
1 2 5.899278 AGAAAGGAGAAGAGAGGAAGTACT 58.101 41.667 0.00 0.00 0.00 2.73
2 3 5.949952 AGAGAAAGGAGAAGAGAGGAAGTAC 59.050 44.000 0.00 0.00 0.00 2.73
3 4 5.949354 CAGAGAAAGGAGAAGAGAGGAAGTA 59.051 44.000 0.00 0.00 0.00 2.24
4 5 4.772100 CAGAGAAAGGAGAAGAGAGGAAGT 59.228 45.833 0.00 0.00 0.00 3.01
5 6 4.772100 ACAGAGAAAGGAGAAGAGAGGAAG 59.228 45.833 0.00 0.00 0.00 3.46
6 7 4.746466 ACAGAGAAAGGAGAAGAGAGGAA 58.254 43.478 0.00 0.00 0.00 3.36
7 8 4.396357 ACAGAGAAAGGAGAAGAGAGGA 57.604 45.455 0.00 0.00 0.00 3.71
8 9 4.819769 CAACAGAGAAAGGAGAAGAGAGG 58.180 47.826 0.00 0.00 0.00 3.69
9 10 4.244862 GCAACAGAGAAAGGAGAAGAGAG 58.755 47.826 0.00 0.00 0.00 3.20
10 11 3.007398 GGCAACAGAGAAAGGAGAAGAGA 59.993 47.826 0.00 0.00 0.00 3.10
11 12 3.007831 AGGCAACAGAGAAAGGAGAAGAG 59.992 47.826 0.00 0.00 41.41 2.85
12 13 2.975489 AGGCAACAGAGAAAGGAGAAGA 59.025 45.455 0.00 0.00 41.41 2.87
13 14 3.415457 AGGCAACAGAGAAAGGAGAAG 57.585 47.619 0.00 0.00 41.41 2.85
14 15 3.864789 AAGGCAACAGAGAAAGGAGAA 57.135 42.857 0.00 0.00 41.41 2.87
15 16 3.744660 GAAAGGCAACAGAGAAAGGAGA 58.255 45.455 0.00 0.00 41.41 3.71
16 17 2.481952 CGAAAGGCAACAGAGAAAGGAG 59.518 50.000 0.00 0.00 41.41 3.69
17 18 2.494059 CGAAAGGCAACAGAGAAAGGA 58.506 47.619 0.00 0.00 41.41 3.36
18 19 1.068954 GCGAAAGGCAACAGAGAAAGG 60.069 52.381 0.00 0.00 42.87 3.11
19 20 2.322371 GCGAAAGGCAACAGAGAAAG 57.678 50.000 0.00 0.00 42.87 2.62
38 39 0.524392 CGTAGAACAGCCAGCGAGAG 60.524 60.000 0.00 0.00 0.00 3.20
39 40 1.241990 ACGTAGAACAGCCAGCGAGA 61.242 55.000 0.00 0.00 0.00 4.04
40 41 1.073216 CACGTAGAACAGCCAGCGAG 61.073 60.000 0.00 0.00 0.00 5.03
41 42 1.080772 CACGTAGAACAGCCAGCGA 60.081 57.895 0.00 0.00 0.00 4.93
42 43 2.730672 GCACGTAGAACAGCCAGCG 61.731 63.158 0.00 0.00 0.00 5.18
43 44 2.730672 CGCACGTAGAACAGCCAGC 61.731 63.158 0.00 0.00 0.00 4.85
44 45 1.372997 ACGCACGTAGAACAGCCAG 60.373 57.895 0.00 0.00 0.00 4.85
45 46 1.663388 CACGCACGTAGAACAGCCA 60.663 57.895 0.00 0.00 0.00 4.75
46 47 0.736325 ATCACGCACGTAGAACAGCC 60.736 55.000 0.00 0.00 0.00 4.85
47 48 1.904144 TATCACGCACGTAGAACAGC 58.096 50.000 0.00 0.00 0.00 4.40
48 49 2.275510 CGTTATCACGCACGTAGAACAG 59.724 50.000 0.00 0.00 40.18 3.16
49 50 2.244251 CGTTATCACGCACGTAGAACA 58.756 47.619 0.00 0.00 40.18 3.18
50 51 2.946133 CGTTATCACGCACGTAGAAC 57.054 50.000 0.00 0.11 40.18 3.01
61 62 8.015087 TCATTCTGATTCAAAACACGTTATCAC 58.985 33.333 0.00 0.00 0.00 3.06
62 63 8.093659 TCATTCTGATTCAAAACACGTTATCA 57.906 30.769 0.00 0.00 0.00 2.15
63 64 9.559958 AATCATTCTGATTCAAAACACGTTATC 57.440 29.630 0.00 0.00 43.03 1.75
64 65 9.345517 CAATCATTCTGATTCAAAACACGTTAT 57.654 29.630 0.00 0.00 43.03 1.89
65 66 8.563732 TCAATCATTCTGATTCAAAACACGTTA 58.436 29.630 0.00 0.00 43.03 3.18
66 67 7.424803 TCAATCATTCTGATTCAAAACACGTT 58.575 30.769 0.00 0.00 43.03 3.99
67 68 6.969366 TCAATCATTCTGATTCAAAACACGT 58.031 32.000 0.00 0.00 43.03 4.49
68 69 7.856492 TTCAATCATTCTGATTCAAAACACG 57.144 32.000 0.00 0.00 43.03 4.49
70 71 9.984190 TCAATTCAATCATTCTGATTCAAAACA 57.016 25.926 0.00 0.00 43.03 2.83
78 79 9.063615 TCGATCAATCAATTCAATCATTCTGAT 57.936 29.630 0.00 0.00 39.09 2.90
79 80 8.441312 TCGATCAATCAATTCAATCATTCTGA 57.559 30.769 0.00 0.00 0.00 3.27
80 81 9.118236 CATCGATCAATCAATTCAATCATTCTG 57.882 33.333 0.00 0.00 0.00 3.02
81 82 8.297426 CCATCGATCAATCAATTCAATCATTCT 58.703 33.333 0.00 0.00 0.00 2.40
82 83 8.080417 ACCATCGATCAATCAATTCAATCATTC 58.920 33.333 0.00 0.00 0.00 2.67
83 84 7.948357 ACCATCGATCAATCAATTCAATCATT 58.052 30.769 0.00 0.00 0.00 2.57
84 85 7.520451 ACCATCGATCAATCAATTCAATCAT 57.480 32.000 0.00 0.00 0.00 2.45
85 86 6.947644 ACCATCGATCAATCAATTCAATCA 57.052 33.333 0.00 0.00 0.00 2.57
86 87 8.344831 TGTAACCATCGATCAATCAATTCAATC 58.655 33.333 0.00 0.00 0.00 2.67
87 88 8.224389 TGTAACCATCGATCAATCAATTCAAT 57.776 30.769 0.00 0.00 0.00 2.57
88 89 7.201723 CCTGTAACCATCGATCAATCAATTCAA 60.202 37.037 0.00 0.00 0.00 2.69
89 90 6.260714 CCTGTAACCATCGATCAATCAATTCA 59.739 38.462 0.00 0.00 0.00 2.57
90 91 6.662616 CCTGTAACCATCGATCAATCAATTC 58.337 40.000 0.00 0.00 0.00 2.17
91 92 5.009010 GCCTGTAACCATCGATCAATCAATT 59.991 40.000 0.00 0.00 0.00 2.32
92 93 4.516698 GCCTGTAACCATCGATCAATCAAT 59.483 41.667 0.00 0.00 0.00 2.57
93 94 3.876914 GCCTGTAACCATCGATCAATCAA 59.123 43.478 0.00 0.00 0.00 2.57
94 95 3.466836 GCCTGTAACCATCGATCAATCA 58.533 45.455 0.00 0.00 0.00 2.57
95 96 2.808543 GGCCTGTAACCATCGATCAATC 59.191 50.000 0.00 0.00 0.00 2.67
96 97 2.487265 GGGCCTGTAACCATCGATCAAT 60.487 50.000 0.84 0.00 0.00 2.57
97 98 1.134220 GGGCCTGTAACCATCGATCAA 60.134 52.381 0.84 0.00 0.00 2.57
98 99 0.468226 GGGCCTGTAACCATCGATCA 59.532 55.000 0.84 0.00 0.00 2.92
99 100 0.250338 GGGGCCTGTAACCATCGATC 60.250 60.000 0.84 0.00 0.00 3.69
100 101 1.705997 GGGGGCCTGTAACCATCGAT 61.706 60.000 0.84 0.00 0.00 3.59
101 102 2.372074 GGGGGCCTGTAACCATCGA 61.372 63.158 0.84 0.00 0.00 3.59
102 103 1.921869 AAGGGGGCCTGTAACCATCG 61.922 60.000 0.84 0.00 32.13 3.84
103 104 0.335019 AAAGGGGGCCTGTAACCATC 59.665 55.000 0.84 0.00 32.13 3.51
104 105 0.790339 AAAAGGGGGCCTGTAACCAT 59.210 50.000 0.84 0.00 32.13 3.55
105 106 1.458017 TAAAAGGGGGCCTGTAACCA 58.542 50.000 0.84 0.00 32.13 3.67
106 107 2.840640 ATAAAAGGGGGCCTGTAACC 57.159 50.000 0.84 0.00 32.13 2.85
107 108 4.800023 ACATATAAAAGGGGGCCTGTAAC 58.200 43.478 0.84 0.00 32.13 2.50
108 109 4.141111 GGACATATAAAAGGGGGCCTGTAA 60.141 45.833 0.84 0.00 32.13 2.41
109 110 3.396611 GGACATATAAAAGGGGGCCTGTA 59.603 47.826 0.84 0.00 32.13 2.74
110 111 2.177016 GGACATATAAAAGGGGGCCTGT 59.823 50.000 0.84 0.00 32.13 4.00
111 112 2.490902 GGGACATATAAAAGGGGGCCTG 60.491 54.545 0.84 0.00 32.13 4.85
112 113 1.787058 GGGACATATAAAAGGGGGCCT 59.213 52.381 0.84 0.00 33.87 5.19
113 114 1.546998 CGGGACATATAAAAGGGGGCC 60.547 57.143 0.00 0.00 0.00 5.80
114 115 1.422402 TCGGGACATATAAAAGGGGGC 59.578 52.381 0.00 0.00 0.00 5.80
115 116 3.393278 TCTTCGGGACATATAAAAGGGGG 59.607 47.826 0.00 0.00 0.00 5.40
116 117 4.347000 TCTCTTCGGGACATATAAAAGGGG 59.653 45.833 0.00 0.00 0.00 4.79
117 118 5.163343 TGTCTCTTCGGGACATATAAAAGGG 60.163 44.000 0.00 0.00 38.57 3.95
118 119 5.753921 GTGTCTCTTCGGGACATATAAAAGG 59.246 44.000 0.00 0.00 44.04 3.11
119 120 5.459107 CGTGTCTCTTCGGGACATATAAAAG 59.541 44.000 0.00 0.00 44.04 2.27
120 121 5.125900 TCGTGTCTCTTCGGGACATATAAAA 59.874 40.000 0.00 0.00 44.04 1.52
121 122 4.641541 TCGTGTCTCTTCGGGACATATAAA 59.358 41.667 0.00 0.00 44.04 1.40
122 123 4.036027 GTCGTGTCTCTTCGGGACATATAA 59.964 45.833 0.00 0.00 44.04 0.98
123 124 3.562973 GTCGTGTCTCTTCGGGACATATA 59.437 47.826 0.00 0.00 44.04 0.86
124 125 2.358267 GTCGTGTCTCTTCGGGACATAT 59.642 50.000 0.00 0.00 44.04 1.78
125 126 1.741706 GTCGTGTCTCTTCGGGACATA 59.258 52.381 0.00 0.00 44.04 2.29
126 127 0.526662 GTCGTGTCTCTTCGGGACAT 59.473 55.000 0.00 0.00 44.04 3.06
127 128 1.848932 CGTCGTGTCTCTTCGGGACA 61.849 60.000 0.00 0.00 40.78 4.02
128 129 1.154263 CGTCGTGTCTCTTCGGGAC 60.154 63.158 0.00 0.00 0.00 4.46
129 130 0.675837 ATCGTCGTGTCTCTTCGGGA 60.676 55.000 0.00 0.00 0.00 5.14
130 131 0.248134 GATCGTCGTGTCTCTTCGGG 60.248 60.000 0.00 0.00 0.00 5.14
131 132 0.248134 GGATCGTCGTGTCTCTTCGG 60.248 60.000 0.00 0.00 0.00 4.30
132 133 0.248134 GGGATCGTCGTGTCTCTTCG 60.248 60.000 0.00 0.00 0.00 3.79
133 134 1.064357 GAGGGATCGTCGTGTCTCTTC 59.936 57.143 4.69 0.00 0.00 2.87
134 135 1.096416 GAGGGATCGTCGTGTCTCTT 58.904 55.000 4.69 0.00 0.00 2.85
135 136 1.090625 CGAGGGATCGTCGTGTCTCT 61.091 60.000 7.72 3.07 37.06 3.10
136 137 1.088340 TCGAGGGATCGTCGTGTCTC 61.088 60.000 13.87 0.00 41.54 3.36
137 138 1.078637 TCGAGGGATCGTCGTGTCT 60.079 57.895 13.87 0.00 41.54 3.41
138 139 1.352404 CTCGAGGGATCGTCGTGTC 59.648 63.158 3.91 0.00 41.54 3.67
139 140 2.113433 CCTCGAGGGATCGTCGTGT 61.113 63.158 24.62 0.00 41.54 4.49
140 141 1.777030 CTCCTCGAGGGATCGTCGTG 61.777 65.000 30.80 11.78 44.15 4.35
141 142 1.524165 CTCCTCGAGGGATCGTCGT 60.524 63.158 30.80 0.00 44.15 4.34
142 143 2.255172 CCTCCTCGAGGGATCGTCG 61.255 68.421 30.80 10.53 45.43 5.12
143 144 3.752704 CCTCCTCGAGGGATCGTC 58.247 66.667 30.80 0.00 45.43 4.20
151 152 3.398353 GAACCGACGCCTCCTCGAG 62.398 68.421 5.13 5.13 32.65 4.04
152 153 3.437795 GAACCGACGCCTCCTCGA 61.438 66.667 0.00 0.00 32.65 4.04
153 154 4.493747 GGAACCGACGCCTCCTCG 62.494 72.222 6.27 0.00 0.00 4.63
154 155 3.358076 CTGGAACCGACGCCTCCTC 62.358 68.421 12.88 0.00 0.00 3.71
155 156 3.382832 CTGGAACCGACGCCTCCT 61.383 66.667 12.88 0.00 0.00 3.69
156 157 4.452733 CCTGGAACCGACGCCTCC 62.453 72.222 6.52 6.52 0.00 4.30
157 158 3.358076 CTCCTGGAACCGACGCCTC 62.358 68.421 0.00 0.00 0.00 4.70
158 159 3.382832 CTCCTGGAACCGACGCCT 61.383 66.667 0.00 0.00 0.00 5.52
159 160 2.630592 GATCTCCTGGAACCGACGCC 62.631 65.000 0.00 0.00 0.00 5.68
160 161 1.227002 GATCTCCTGGAACCGACGC 60.227 63.158 0.00 0.00 0.00 5.19
161 162 1.064296 CGATCTCCTGGAACCGACG 59.936 63.158 0.00 0.00 0.00 5.12
162 163 0.815734 TTCGATCTCCTGGAACCGAC 59.184 55.000 12.29 0.00 0.00 4.79
163 164 1.103803 CTTCGATCTCCTGGAACCGA 58.896 55.000 9.65 9.65 0.00 4.69
164 165 0.103208 CCTTCGATCTCCTGGAACCG 59.897 60.000 0.00 1.84 0.00 4.44
165 166 0.466124 CCCTTCGATCTCCTGGAACC 59.534 60.000 0.00 0.00 0.00 3.62
166 167 1.410882 CTCCCTTCGATCTCCTGGAAC 59.589 57.143 0.00 0.00 0.00 3.62
167 168 1.288037 TCTCCCTTCGATCTCCTGGAA 59.712 52.381 0.00 0.00 0.00 3.53
168 169 0.927029 TCTCCCTTCGATCTCCTGGA 59.073 55.000 0.00 0.00 0.00 3.86
169 170 1.036707 GTCTCCCTTCGATCTCCTGG 58.963 60.000 0.00 0.00 0.00 4.45
170 171 0.665835 CGTCTCCCTTCGATCTCCTG 59.334 60.000 0.00 0.00 0.00 3.86
171 172 0.256464 ACGTCTCCCTTCGATCTCCT 59.744 55.000 0.00 0.00 0.00 3.69
172 173 0.664224 GACGTCTCCCTTCGATCTCC 59.336 60.000 8.70 0.00 0.00 3.71
173 174 0.305313 CGACGTCTCCCTTCGATCTC 59.695 60.000 14.70 0.00 34.62 2.75
174 175 1.096386 CCGACGTCTCCCTTCGATCT 61.096 60.000 14.70 0.00 34.62 2.75
175 176 1.355916 CCGACGTCTCCCTTCGATC 59.644 63.158 14.70 0.00 34.62 3.69
176 177 0.964358 AACCGACGTCTCCCTTCGAT 60.964 55.000 14.70 0.00 34.62 3.59
177 178 1.601759 AACCGACGTCTCCCTTCGA 60.602 57.895 14.70 0.00 34.62 3.71
178 179 1.443872 CAACCGACGTCTCCCTTCG 60.444 63.158 14.70 0.00 0.00 3.79
179 180 1.737008 GCAACCGACGTCTCCCTTC 60.737 63.158 14.70 0.00 0.00 3.46
180 181 2.342648 GCAACCGACGTCTCCCTT 59.657 61.111 14.70 0.00 0.00 3.95
181 182 4.052229 CGCAACCGACGTCTCCCT 62.052 66.667 14.70 0.00 36.29 4.20
184 185 4.047059 TCCCGCAACCGACGTCTC 62.047 66.667 14.70 0.00 36.29 3.36
185 186 4.353437 GTCCCGCAACCGACGTCT 62.353 66.667 14.70 0.00 36.29 4.18
186 187 4.651008 TGTCCCGCAACCGACGTC 62.651 66.667 5.18 5.18 36.29 4.34
187 188 3.736732 TTTGTCCCGCAACCGACGT 62.737 57.895 0.00 0.00 36.72 4.34
188 189 2.968156 TTTGTCCCGCAACCGACG 60.968 61.111 0.00 0.00 36.72 5.12
189 190 2.635338 GTTTGTCCCGCAACCGAC 59.365 61.111 0.00 0.00 36.72 4.79
190 191 2.592287 GGTTTGTCCCGCAACCGA 60.592 61.111 0.00 0.00 36.72 4.69
191 192 4.020378 CGGTTTGTCCCGCAACCG 62.020 66.667 9.08 9.08 41.78 4.44
198 199 2.635338 GTCGTTGCGGTTTGTCCC 59.365 61.111 0.00 0.00 0.00 4.46
199 200 2.247267 CGTCGTTGCGGTTTGTCC 59.753 61.111 0.00 0.00 0.00 4.02
200 201 2.247267 CCGTCGTTGCGGTTTGTC 59.753 61.111 7.45 0.00 46.11 3.18
207 208 4.676586 GCCCAAACCGTCGTTGCG 62.677 66.667 0.00 0.00 30.72 4.85
208 209 2.999363 CTTGCCCAAACCGTCGTTGC 62.999 60.000 0.00 0.00 30.72 4.17
209 210 1.008995 CTTGCCCAAACCGTCGTTG 60.009 57.895 0.00 0.00 30.72 4.10
210 211 2.190841 CCTTGCCCAAACCGTCGTT 61.191 57.895 0.00 0.00 0.00 3.85
211 212 2.593436 CCTTGCCCAAACCGTCGT 60.593 61.111 0.00 0.00 0.00 4.34
212 213 3.361977 CCCTTGCCCAAACCGTCG 61.362 66.667 0.00 0.00 0.00 5.12
213 214 2.989253 CCCCTTGCCCAAACCGTC 60.989 66.667 0.00 0.00 0.00 4.79
214 215 3.503839 TCCCCTTGCCCAAACCGT 61.504 61.111 0.00 0.00 0.00 4.83
215 216 2.499303 ATCTCCCCTTGCCCAAACCG 62.499 60.000 0.00 0.00 0.00 4.44
216 217 0.252239 AATCTCCCCTTGCCCAAACC 60.252 55.000 0.00 0.00 0.00 3.27
217 218 1.644509 AAATCTCCCCTTGCCCAAAC 58.355 50.000 0.00 0.00 0.00 2.93
218 219 2.256306 GAAAATCTCCCCTTGCCCAAA 58.744 47.619 0.00 0.00 0.00 3.28
219 220 1.552254 GGAAAATCTCCCCTTGCCCAA 60.552 52.381 0.00 0.00 38.44 4.12
220 221 0.041090 GGAAAATCTCCCCTTGCCCA 59.959 55.000 0.00 0.00 38.44 5.36
221 222 2.901975 GGAAAATCTCCCCTTGCCC 58.098 57.895 0.00 0.00 38.44 5.36
229 230 8.758829 ACAATTTGTAATTAGGGGAAAATCTCC 58.241 33.333 0.00 0.00 44.54 3.71
259 260 9.459640 GCTTCGTCTATGTATGTGTTAGAATTA 57.540 33.333 0.00 0.00 0.00 1.40
260 261 7.979537 TGCTTCGTCTATGTATGTGTTAGAATT 59.020 33.333 0.00 0.00 0.00 2.17
261 262 7.489160 TGCTTCGTCTATGTATGTGTTAGAAT 58.511 34.615 0.00 0.00 0.00 2.40
262 263 6.859017 TGCTTCGTCTATGTATGTGTTAGAA 58.141 36.000 0.00 0.00 0.00 2.10
263 264 6.445357 TGCTTCGTCTATGTATGTGTTAGA 57.555 37.500 0.00 0.00 0.00 2.10
264 265 6.918022 TCATGCTTCGTCTATGTATGTGTTAG 59.082 38.462 0.00 0.00 30.46 2.34
267 268 5.262588 TCATGCTTCGTCTATGTATGTGT 57.737 39.130 0.00 0.00 30.46 3.72
289 292 1.077663 AGACAAGGTGGCCATCCATTT 59.922 47.619 13.91 0.00 45.62 2.32
300 303 2.149578 CAAGAGGCTCAAGACAAGGTG 58.850 52.381 18.26 0.00 0.00 4.00
302 305 2.149578 CACAAGAGGCTCAAGACAAGG 58.850 52.381 18.26 0.00 0.00 3.61
320 323 6.511767 GCAATGTGTGGATGCTAGTATTACAC 60.512 42.308 23.16 23.16 37.12 2.90
363 369 3.031736 TCCTGGTCTGTGAGGCTAATAC 58.968 50.000 0.00 0.00 0.00 1.89
367 373 2.254152 AATCCTGGTCTGTGAGGCTA 57.746 50.000 0.00 0.00 0.00 3.93
391 397 2.031258 TCAACTTGTCAAACGCAGGA 57.969 45.000 0.00 0.00 0.00 3.86
393 399 6.636447 TGATTAATTCAACTTGTCAAACGCAG 59.364 34.615 0.00 0.00 0.00 5.18
395 401 6.636850 ACTGATTAATTCAACTTGTCAAACGC 59.363 34.615 0.00 0.00 32.78 4.84
429 435 0.395586 TGCCCACAAGTTTGCTCACT 60.396 50.000 0.00 0.00 0.00 3.41
444 450 9.305925 CTCTAAATATGAACTTTCAATTTGCCC 57.694 33.333 15.18 0.00 41.13 5.36
500 506 9.656040 AGTGCAATTTCAAGCAAATTAATCATA 57.344 25.926 0.00 0.00 41.94 2.15
501 507 8.556213 AGTGCAATTTCAAGCAAATTAATCAT 57.444 26.923 0.00 0.00 41.94 2.45
502 508 7.966246 AGTGCAATTTCAAGCAAATTAATCA 57.034 28.000 0.00 0.00 41.94 2.57
503 509 8.497554 TCAAGTGCAATTTCAAGCAAATTAATC 58.502 29.630 0.00 0.00 41.94 1.75
504 510 8.380743 TCAAGTGCAATTTCAAGCAAATTAAT 57.619 26.923 0.00 0.00 41.94 1.40
505 511 7.783090 TCAAGTGCAATTTCAAGCAAATTAA 57.217 28.000 0.00 0.00 41.94 1.40
506 512 7.656542 TCATCAAGTGCAATTTCAAGCAAATTA 59.343 29.630 0.00 0.00 41.94 1.40
507 513 6.483974 TCATCAAGTGCAATTTCAAGCAAATT 59.516 30.769 0.00 0.00 44.25 1.82
508 514 5.992829 TCATCAAGTGCAATTTCAAGCAAAT 59.007 32.000 0.00 0.00 43.20 2.32
509 515 5.358090 TCATCAAGTGCAATTTCAAGCAAA 58.642 33.333 0.00 0.00 43.20 3.68
510 516 4.946445 TCATCAAGTGCAATTTCAAGCAA 58.054 34.783 0.00 0.00 43.20 3.91
511 517 4.278919 TCTCATCAAGTGCAATTTCAAGCA 59.721 37.500 0.00 0.00 38.65 3.91
512 518 4.801891 TCTCATCAAGTGCAATTTCAAGC 58.198 39.130 0.00 0.00 0.00 4.01
513 519 6.128902 GCTTTCTCATCAAGTGCAATTTCAAG 60.129 38.462 0.00 0.00 0.00 3.02
514 520 5.693104 GCTTTCTCATCAAGTGCAATTTCAA 59.307 36.000 0.00 0.00 0.00 2.69
515 521 5.224888 GCTTTCTCATCAAGTGCAATTTCA 58.775 37.500 0.00 0.00 0.00 2.69
516 522 4.322804 CGCTTTCTCATCAAGTGCAATTTC 59.677 41.667 0.00 0.00 0.00 2.17
517 523 4.232221 CGCTTTCTCATCAAGTGCAATTT 58.768 39.130 0.00 0.00 0.00 1.82
518 524 3.254166 ACGCTTTCTCATCAAGTGCAATT 59.746 39.130 0.00 0.00 35.52 2.32
519 525 2.816087 ACGCTTTCTCATCAAGTGCAAT 59.184 40.909 0.00 0.00 35.52 3.56
520 526 2.221169 ACGCTTTCTCATCAAGTGCAA 58.779 42.857 0.00 0.00 35.52 4.08
521 527 1.882912 ACGCTTTCTCATCAAGTGCA 58.117 45.000 0.00 0.00 35.52 4.57
522 528 2.977405 AACGCTTTCTCATCAAGTGC 57.023 45.000 0.00 0.00 35.52 4.40
523 529 7.301054 AGAAATAAACGCTTTCTCATCAAGTG 58.699 34.615 0.00 0.00 38.28 3.16
524 530 7.440523 AGAAATAAACGCTTTCTCATCAAGT 57.559 32.000 0.00 0.00 38.28 3.16
525 531 8.633408 CAAAGAAATAAACGCTTTCTCATCAAG 58.367 33.333 0.00 0.00 41.01 3.02
526 532 8.349245 TCAAAGAAATAAACGCTTTCTCATCAA 58.651 29.630 0.00 0.00 41.01 2.57
527 533 7.870826 TCAAAGAAATAAACGCTTTCTCATCA 58.129 30.769 0.00 0.00 41.01 3.07
528 534 8.902040 ATCAAAGAAATAAACGCTTTCTCATC 57.098 30.769 0.00 0.00 41.01 2.92
530 536 9.825972 CTAATCAAAGAAATAAACGCTTTCTCA 57.174 29.630 0.00 0.00 41.01 3.27
531 537 9.278734 CCTAATCAAAGAAATAAACGCTTTCTC 57.721 33.333 0.00 0.00 41.01 2.87
532 538 7.755373 GCCTAATCAAAGAAATAAACGCTTTCT 59.245 33.333 0.00 0.00 43.10 2.52
533 539 7.009265 GGCCTAATCAAAGAAATAAACGCTTTC 59.991 37.037 0.00 0.00 33.69 2.62
534 540 6.811665 GGCCTAATCAAAGAAATAAACGCTTT 59.188 34.615 0.00 0.00 32.46 3.51
535 541 6.152831 AGGCCTAATCAAAGAAATAAACGCTT 59.847 34.615 1.29 0.00 0.00 4.68
536 542 5.652452 AGGCCTAATCAAAGAAATAAACGCT 59.348 36.000 1.29 0.00 0.00 5.07
537 543 5.891451 AGGCCTAATCAAAGAAATAAACGC 58.109 37.500 1.29 0.00 0.00 4.84
538 544 7.282450 AGGTAGGCCTAATCAAAGAAATAAACG 59.718 37.037 15.83 0.00 44.90 3.60
539 545 8.406297 CAGGTAGGCCTAATCAAAGAAATAAAC 58.594 37.037 15.83 0.00 44.97 2.01
540 546 8.113462 ACAGGTAGGCCTAATCAAAGAAATAAA 58.887 33.333 15.83 0.00 44.97 1.40
541 547 7.639378 ACAGGTAGGCCTAATCAAAGAAATAA 58.361 34.615 15.83 0.00 44.97 1.40
542 548 7.208064 ACAGGTAGGCCTAATCAAAGAAATA 57.792 36.000 15.83 0.00 44.97 1.40
543 549 6.079712 ACAGGTAGGCCTAATCAAAGAAAT 57.920 37.500 15.83 0.00 44.97 2.17
544 550 5.514500 ACAGGTAGGCCTAATCAAAGAAA 57.486 39.130 15.83 0.00 44.97 2.52
608 614 1.321074 ACTTAGTCCTCGGGAAGCGG 61.321 60.000 0.00 0.00 31.38 5.52
610 616 0.100861 CGACTTAGTCCTCGGGAAGC 59.899 60.000 6.80 0.00 31.38 3.86
611 617 1.671845 CTCGACTTAGTCCTCGGGAAG 59.328 57.143 6.80 0.00 31.65 3.46
613 619 0.747283 GCTCGACTTAGTCCTCGGGA 60.747 60.000 6.80 0.00 31.65 5.14
614 620 0.748729 AGCTCGACTTAGTCCTCGGG 60.749 60.000 6.80 0.00 33.27 5.14
615 621 0.378962 CAGCTCGACTTAGTCCTCGG 59.621 60.000 6.80 0.00 0.00 4.63
617 623 1.402613 GACCAGCTCGACTTAGTCCTC 59.597 57.143 6.80 0.00 0.00 3.71
618 624 1.271982 TGACCAGCTCGACTTAGTCCT 60.272 52.381 6.80 0.00 30.90 3.85
619 625 1.135344 GTGACCAGCTCGACTTAGTCC 60.135 57.143 6.80 0.00 30.90 3.85
620 626 1.813786 AGTGACCAGCTCGACTTAGTC 59.186 52.381 1.64 1.64 32.09 2.59
621 627 1.912417 AGTGACCAGCTCGACTTAGT 58.088 50.000 0.00 0.00 0.00 2.24
622 628 3.305398 AAAGTGACCAGCTCGACTTAG 57.695 47.619 0.00 0.00 0.00 2.18
623 629 3.746045 AAAAGTGACCAGCTCGACTTA 57.254 42.857 0.00 0.00 0.00 2.24
624 630 2.622064 AAAAGTGACCAGCTCGACTT 57.378 45.000 0.00 0.00 0.00 3.01
625 631 2.622064 AAAAAGTGACCAGCTCGACT 57.378 45.000 0.00 0.00 0.00 4.18
648 654 9.971922 CCTTTGAAATAAGGCCTATATTTTCAG 57.028 33.333 22.74 19.00 38.39 3.02
713 727 7.712639 CCTAGACTATCTGCTATTCTTGCAAAA 59.287 37.037 0.00 0.00 40.13 2.44
726 740 2.873649 GCCCATTGCCTAGACTATCTGC 60.874 54.545 0.00 0.00 0.00 4.26
750 764 8.504005 GCAACTAGTGATTATTACTGTGTGTTT 58.496 33.333 0.00 0.00 0.00 2.83
751 765 7.148639 CGCAACTAGTGATTATTACTGTGTGTT 60.149 37.037 0.00 0.00 0.00 3.32
752 766 6.310467 CGCAACTAGTGATTATTACTGTGTGT 59.690 38.462 0.00 0.00 0.00 3.72
753 767 6.696198 CGCAACTAGTGATTATTACTGTGTG 58.304 40.000 0.00 0.00 0.00 3.82
754 768 5.291128 GCGCAACTAGTGATTATTACTGTGT 59.709 40.000 0.30 0.00 0.00 3.72
755 769 5.520288 AGCGCAACTAGTGATTATTACTGTG 59.480 40.000 11.47 0.00 0.00 3.66
756 770 5.520288 CAGCGCAACTAGTGATTATTACTGT 59.480 40.000 11.47 0.00 0.00 3.55
757 771 5.520288 ACAGCGCAACTAGTGATTATTACTG 59.480 40.000 11.47 0.00 0.00 2.74
758 772 5.661458 ACAGCGCAACTAGTGATTATTACT 58.339 37.500 11.47 0.00 0.00 2.24
759 773 5.968387 ACAGCGCAACTAGTGATTATTAC 57.032 39.130 11.47 0.00 0.00 1.89
760 774 6.816640 AGAAACAGCGCAACTAGTGATTATTA 59.183 34.615 11.47 0.00 0.00 0.98
761 775 5.643777 AGAAACAGCGCAACTAGTGATTATT 59.356 36.000 11.47 0.00 0.00 1.40
762 776 5.063944 CAGAAACAGCGCAACTAGTGATTAT 59.936 40.000 11.47 0.00 0.00 1.28
763 777 4.388773 CAGAAACAGCGCAACTAGTGATTA 59.611 41.667 11.47 0.00 0.00 1.75
764 778 3.187227 CAGAAACAGCGCAACTAGTGATT 59.813 43.478 11.47 0.00 0.00 2.57
765 779 2.738846 CAGAAACAGCGCAACTAGTGAT 59.261 45.455 11.47 0.00 0.00 3.06
766 780 2.135139 CAGAAACAGCGCAACTAGTGA 58.865 47.619 11.47 0.00 0.00 3.41
767 781 1.195448 CCAGAAACAGCGCAACTAGTG 59.805 52.381 11.47 0.00 0.00 2.74
768 782 1.512926 CCAGAAACAGCGCAACTAGT 58.487 50.000 11.47 0.00 0.00 2.57
769 783 0.798776 CCCAGAAACAGCGCAACTAG 59.201 55.000 11.47 0.00 0.00 2.57
770 784 1.234615 GCCCAGAAACAGCGCAACTA 61.235 55.000 11.47 0.00 0.00 2.24
771 785 2.555547 GCCCAGAAACAGCGCAACT 61.556 57.895 11.47 0.00 0.00 3.16
772 786 2.050077 GCCCAGAAACAGCGCAAC 60.050 61.111 11.47 0.00 0.00 4.17
773 787 2.203337 AGCCCAGAAACAGCGCAA 60.203 55.556 11.47 0.00 0.00 4.85
774 788 2.979676 CAGCCCAGAAACAGCGCA 60.980 61.111 11.47 0.00 0.00 6.09
775 789 2.669569 TCAGCCCAGAAACAGCGC 60.670 61.111 0.00 0.00 0.00 5.92
1181 1217 2.662596 GTCAGGACCATGACGGCA 59.337 61.111 0.00 0.00 40.18 5.69
1191 2069 0.038159 CGAGACAAGGTGGTCAGGAC 60.038 60.000 0.00 0.00 40.29 3.85
1434 2369 4.220693 TGAACATGTATAGCAGGCACTT 57.779 40.909 0.00 0.00 34.60 3.16
1438 2373 4.576053 TGACATTGAACATGTATAGCAGGC 59.424 41.667 0.00 0.00 30.99 4.85
1443 2378 5.176406 CGCTCCTGACATTGAACATGTATAG 59.824 44.000 0.00 0.00 31.52 1.31
1460 2395 2.813179 GCCGCAATACACGCTCCTG 61.813 63.158 0.00 0.00 0.00 3.86
1475 2410 4.198028 TCATCATCTCCTTCATATGCCG 57.802 45.455 0.00 0.00 0.00 5.69
1476 2411 7.337167 ACTAATCATCATCTCCTTCATATGCC 58.663 38.462 0.00 0.00 0.00 4.40
1477 2412 7.222417 CGACTAATCATCATCTCCTTCATATGC 59.778 40.741 0.00 0.00 0.00 3.14
1478 2413 7.222417 GCGACTAATCATCATCTCCTTCATATG 59.778 40.741 0.00 0.00 0.00 1.78
1480 2415 6.209391 TGCGACTAATCATCATCTCCTTCATA 59.791 38.462 0.00 0.00 0.00 2.15
1481 2416 5.011431 TGCGACTAATCATCATCTCCTTCAT 59.989 40.000 0.00 0.00 0.00 2.57
1482 2417 4.342092 TGCGACTAATCATCATCTCCTTCA 59.658 41.667 0.00 0.00 0.00 3.02
1483 2418 4.683781 GTGCGACTAATCATCATCTCCTTC 59.316 45.833 0.00 0.00 0.00 3.46
1485 2443 3.304996 CGTGCGACTAATCATCATCTCCT 60.305 47.826 0.00 0.00 0.00 3.69
1490 2448 2.288457 CCTCCGTGCGACTAATCATCAT 60.288 50.000 0.00 0.00 0.00 2.45
1491 2449 1.067060 CCTCCGTGCGACTAATCATCA 59.933 52.381 0.00 0.00 0.00 3.07
1505 2463 2.126417 CTGTCACGACGAACCTCCGT 62.126 60.000 0.00 0.00 46.43 4.69
1558 2517 1.461127 GCCTCTGACAAAGCAACTACG 59.539 52.381 0.00 0.00 0.00 3.51
1572 2531 3.070018 AGAATTGTTCAAGTCGCCTCTG 58.930 45.455 7.22 0.00 0.00 3.35
1605 2564 0.586802 GGACTGACAACTGCGGTTTC 59.413 55.000 8.58 10.43 32.73 2.78
1647 2608 6.252967 ACACGATGATAAACAAAGCAATGA 57.747 33.333 0.00 0.00 0.00 2.57
1652 2613 5.448438 TGTCAACACGATGATAAACAAAGC 58.552 37.500 0.00 0.00 0.00 3.51
1666 2627 3.559655 TCATTTGGAGTTCTGTCAACACG 59.440 43.478 0.00 0.00 0.00 4.49
1668 2629 4.576053 CAGTCATTTGGAGTTCTGTCAACA 59.424 41.667 0.00 0.00 0.00 3.33
1679 2640 5.181009 TGATACAGCTTCAGTCATTTGGAG 58.819 41.667 0.00 0.00 0.00 3.86
1686 2647 6.041423 TGAAGAATGATACAGCTTCAGTCA 57.959 37.500 14.72 4.18 41.08 3.41
1699 2660 4.978099 ACAGGTGTGAACTGAAGAATGAT 58.022 39.130 0.00 0.00 39.24 2.45
1731 2693 3.009033 TCAATCTTAGGAACCACCACCAG 59.991 47.826 0.00 0.00 42.04 4.00
1775 2738 5.878261 CAAGACATGCTGAAAAGAAACAC 57.122 39.130 0.00 0.00 0.00 3.32
1857 2824 6.672657 AGTATAGTTAAGCAGAGGGGAGAAAA 59.327 38.462 0.00 0.00 0.00 2.29
1859 2826 5.778542 AGTATAGTTAAGCAGAGGGGAGAA 58.221 41.667 0.00 0.00 0.00 2.87
1898 2867 8.846943 ATACTTGTCATACAAAATCACAGACA 57.153 30.769 0.00 0.00 37.69 3.41
1940 2909 0.109689 GACTTCCAGTCGGTCAGTCG 60.110 60.000 0.00 0.00 35.28 4.18
1941 2910 3.796667 GACTTCCAGTCGGTCAGTC 57.203 57.895 0.00 0.00 35.28 3.51
2055 3024 4.955925 TTGCAACACCATTAAGATACCG 57.044 40.909 0.00 0.00 0.00 4.02
2129 3098 5.591067 AGGAAAACATCGGTGTGAAACTAAA 59.409 36.000 0.00 0.00 38.92 1.85
2147 3116 3.881220 AGAACGGTGTCTGAAAGGAAAA 58.119 40.909 0.00 0.00 0.00 2.29
2292 3261 5.044558 GTGGAGACGGAATAATCTGAAGTC 58.955 45.833 0.00 0.00 35.77 3.01
2294 3263 5.068460 AGAGTGGAGACGGAATAATCTGAAG 59.932 44.000 0.00 0.00 35.77 3.02
2326 3295 6.222038 TGGTAAAGATTGGAGCTACAGTAG 57.778 41.667 0.00 2.85 0.00 2.57
2330 3299 6.808321 AGTATGGTAAAGATTGGAGCTACA 57.192 37.500 0.00 0.00 0.00 2.74
2378 3354 3.409851 TTTTGCTGCAGAATCATAGCG 57.590 42.857 20.43 0.00 38.96 4.26
2495 3471 4.770795 ACTCCTTGAAGGATATTTGACCG 58.229 43.478 15.35 2.06 44.81 4.79
2630 3606 7.015877 CGACCTCACTAGTAATTTTCTTTTGC 58.984 38.462 0.00 0.00 0.00 3.68
2785 3761 2.505819 GGCCTCCTTTGACCTAATCTCA 59.494 50.000 0.00 0.00 0.00 3.27
2876 3852 3.671008 TGAGCTCTGCCGTTAAAACTA 57.329 42.857 16.19 0.00 0.00 2.24
3007 3983 1.968493 TCGCTTTCTCCACTGGTTAGT 59.032 47.619 0.00 0.00 37.75 2.24
3063 4039 1.209504 TGGTCTTTGGGGCTATTCTCG 59.790 52.381 0.00 0.00 0.00 4.04
3148 4126 7.975616 AGTGCGCAAATGAAAAGAAACATATAT 59.024 29.630 14.00 0.00 0.00 0.86
3150 4128 6.158598 AGTGCGCAAATGAAAAGAAACATAT 58.841 32.000 14.00 0.00 0.00 1.78
3152 4130 4.370917 AGTGCGCAAATGAAAAGAAACAT 58.629 34.783 14.00 0.00 0.00 2.71
3154 4132 4.267452 TCAAGTGCGCAAATGAAAAGAAAC 59.733 37.500 20.39 1.12 0.00 2.78
3155 4133 4.428209 TCAAGTGCGCAAATGAAAAGAAA 58.572 34.783 20.39 0.49 0.00 2.52
3157 4135 3.706802 TCAAGTGCGCAAATGAAAAGA 57.293 38.095 20.39 5.41 0.00 2.52
3158 4136 4.376615 CCATTCAAGTGCGCAAATGAAAAG 60.377 41.667 30.78 25.93 35.62 2.27
3159 4137 3.493877 CCATTCAAGTGCGCAAATGAAAA 59.506 39.130 30.78 17.54 35.62 2.29
3160 4138 3.058450 CCATTCAAGTGCGCAAATGAAA 58.942 40.909 30.78 19.72 35.62 2.69
3161 4139 2.674954 CCATTCAAGTGCGCAAATGAA 58.325 42.857 29.85 29.85 36.35 2.57
3162 4140 1.669502 GCCATTCAAGTGCGCAAATGA 60.670 47.619 26.36 22.97 32.14 2.57
3163 4141 0.717224 GCCATTCAAGTGCGCAAATG 59.283 50.000 20.55 20.55 0.00 2.32
3169 4147 2.180017 GCCTGCCATTCAAGTGCG 59.820 61.111 0.00 0.00 0.00 5.34
3183 4161 4.158015 ACAACTACTACCAGTTACAGCCT 58.842 43.478 0.00 0.00 36.61 4.58
3200 4178 5.510671 CGACAGCAAATGAACTAAACAACT 58.489 37.500 0.00 0.00 0.00 3.16
3218 4196 0.788995 CTGACAAGAAGCAGCGACAG 59.211 55.000 0.00 0.00 0.00 3.51
3223 4201 0.516439 GCTGACTGACAAGAAGCAGC 59.484 55.000 0.00 0.00 38.43 5.25
3247 4225 4.383770 GCTGGTAGGGTGAAAGCAATACTA 60.384 45.833 0.00 0.00 34.77 1.82
3354 4332 2.283298 CTCGCCAGCATTTCACTGTAT 58.717 47.619 0.00 0.00 33.09 2.29
3446 4427 9.237187 TGTTTGGCTGATAAAACTGATGTAATA 57.763 29.630 0.00 0.00 37.22 0.98
3447 4428 8.121305 TGTTTGGCTGATAAAACTGATGTAAT 57.879 30.769 0.00 0.00 37.22 1.89
3448 4429 7.517614 TGTTTGGCTGATAAAACTGATGTAA 57.482 32.000 0.00 0.00 37.22 2.41
3449 4430 6.349280 GCTGTTTGGCTGATAAAACTGATGTA 60.349 38.462 8.69 0.00 37.39 2.29
3450 4431 5.565439 GCTGTTTGGCTGATAAAACTGATGT 60.565 40.000 8.69 0.00 37.39 3.06
3451 4432 4.860907 GCTGTTTGGCTGATAAAACTGATG 59.139 41.667 8.69 0.00 37.39 3.07
3452 4433 4.768968 AGCTGTTTGGCTGATAAAACTGAT 59.231 37.500 8.69 0.99 41.43 2.90
3453 4434 4.144297 AGCTGTTTGGCTGATAAAACTGA 58.856 39.130 8.69 0.00 41.43 3.41
3454 4435 4.217118 AGAGCTGTTTGGCTGATAAAACTG 59.783 41.667 0.00 0.00 43.20 3.16
3455 4436 4.401925 AGAGCTGTTTGGCTGATAAAACT 58.598 39.130 0.00 0.00 43.20 2.66
3456 4437 4.773323 AGAGCTGTTTGGCTGATAAAAC 57.227 40.909 0.00 0.00 43.20 2.43
3457 4438 5.357878 CCATAGAGCTGTTTGGCTGATAAAA 59.642 40.000 7.41 0.00 43.20 1.52
3458 4439 4.883585 CCATAGAGCTGTTTGGCTGATAAA 59.116 41.667 7.41 0.00 43.20 1.40
3477 4480 8.044908 CCTGCCTAAGAAACTAGTAAAACCATA 58.955 37.037 0.00 0.00 0.00 2.74
3486 4489 1.207329 CGGCCTGCCTAAGAAACTAGT 59.793 52.381 6.60 0.00 0.00 2.57
3504 4507 2.281517 TGGACAAACTACAACACACGG 58.718 47.619 0.00 0.00 0.00 4.94
3508 4511 4.439057 TCTGTCTGGACAAACTACAACAC 58.561 43.478 4.94 0.00 41.33 3.32
3554 4566 4.624364 GCTAGAGTCCTCGGAGCAGATATA 60.624 50.000 15.23 0.00 40.68 0.86
3569 4589 3.358118 ACTGAACCTACCAGCTAGAGTC 58.642 50.000 0.00 0.00 35.14 3.36
3584 4604 9.141400 CAAACCTCAGATAAACTACTACTGAAC 57.859 37.037 0.00 0.00 37.20 3.18
3646 4666 7.492669 CGCCTCGATATAATTTAAGATGGTGAT 59.507 37.037 0.00 0.00 0.00 3.06
3697 4719 2.565841 AGAACAGAGAGCAAACACCAC 58.434 47.619 0.00 0.00 0.00 4.16
3794 4820 6.257193 TGCAGCTATATATTGCAGATCATTCG 59.743 38.462 19.16 0.60 42.41 3.34
3821 4847 8.201554 TGTATTGATTGATAGCAGTTGAACTC 57.798 34.615 0.00 0.00 0.00 3.01
4279 5763 3.767230 GACGACGACGACGACCGA 61.767 66.667 25.15 0.00 42.66 4.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.