Multiple sequence alignment - TraesCS4D01G036200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G036200 chr4D 100.000 4374 0 0 1 4374 16149546 16153919 0.000000e+00 8078.0
1 TraesCS4D01G036200 chr4D 86.047 86 10 2 1423 1506 402546593 402546678 1.680000e-14 91.6
2 TraesCS4D01G036200 chr4A 91.750 3006 151 38 721 3679 584352252 584349297 0.000000e+00 4087.0
3 TraesCS4D01G036200 chr4A 79.545 396 53 20 3881 4259 584347513 584347129 1.560000e-64 257.0
4 TraesCS4D01G036200 chr4A 78.498 293 36 14 288 579 584353436 584353170 2.710000e-37 167.0
5 TraesCS4D01G036200 chr4A 90.291 103 6 3 4273 4374 584347076 584346977 9.870000e-27 132.0
6 TraesCS4D01G036200 chr4A 84.884 86 11 2 1423 1506 60035637 60035722 7.790000e-13 86.1
7 TraesCS4D01G036200 chr4A 92.593 54 4 0 1455 1508 597736545 597736492 1.300000e-10 78.7
8 TraesCS4D01G036200 chr4B 92.461 1963 91 26 674 2593 27904431 27906379 0.000000e+00 2752.0
9 TraesCS4D01G036200 chr4B 89.314 1254 78 22 2937 4160 27929280 27930507 0.000000e+00 1522.0
10 TraesCS4D01G036200 chr4B 86.520 319 37 5 362 677 27904153 27904468 3.240000e-91 346.0
11 TraesCS4D01G036200 chr4B 85.159 283 29 3 2661 2930 27928896 27929178 1.200000e-70 278.0
12 TraesCS4D01G036200 chr4B 96.104 77 3 0 4295 4371 27930729 27930805 4.590000e-25 126.0
13 TraesCS4D01G036200 chr4B 86.047 86 10 2 1423 1506 498391679 498391764 1.680000e-14 91.6
14 TraesCS4D01G036200 chr3B 86.250 80 11 0 1426 1505 455682366 455682287 2.170000e-13 87.9
15 TraesCS4D01G036200 chr2D 83.133 83 11 2 1423 1503 599208929 599209010 6.070000e-09 73.1
16 TraesCS4D01G036200 chr5B 88.136 59 7 0 1426 1484 478307344 478307402 2.180000e-08 71.3
17 TraesCS4D01G036200 chr5A 88.136 59 7 0 1426 1484 503139455 503139513 2.180000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G036200 chr4D 16149546 16153919 4373 False 8078.00 8078 100.000000 1 4374 1 chr4D.!!$F1 4373
1 TraesCS4D01G036200 chr4A 584346977 584353436 6459 True 1160.75 4087 85.021000 288 4374 4 chr4A.!!$R2 4086
2 TraesCS4D01G036200 chr4B 27904153 27906379 2226 False 1549.00 2752 89.490500 362 2593 2 chr4B.!!$F2 2231
3 TraesCS4D01G036200 chr4B 27928896 27930805 1909 False 642.00 1522 90.192333 2661 4371 3 chr4B.!!$F3 1710

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
150 151 0.035458 CACTTCGGCCAAAGGTCTCT 59.965 55.000 8.63 0.0 0.00 3.10 F
152 153 0.035458 CTTCGGCCAAAGGTCTCTGT 59.965 55.000 2.24 0.0 0.00 3.41 F
265 266 0.100682 TCGGCTGCTCATACTCGAAC 59.899 55.000 0.00 0.0 0.00 3.95 F
270 271 0.100682 TGCTCATACTCGAACTCGGC 59.899 55.000 0.00 0.0 40.29 5.54 F
409 411 0.178906 TGATGCCGAGGGATGGGATA 60.179 55.000 0.00 0.0 37.71 2.59 F
1314 2145 1.014352 ACCTATTTTCGCCACGATGC 58.986 50.000 0.00 0.0 35.23 3.91 F
2607 3467 2.089201 TGGAGAAATGCATGCTGACAG 58.911 47.619 20.33 0.0 0.00 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1796 2649 0.034896 AGTCGGCATGAAGAACCGTT 59.965 50.000 8.30 0.0 46.92 4.44 R
1799 2652 1.079503 GTCAGTCGGCATGAAGAACC 58.920 55.000 0.00 0.0 0.00 3.62 R
1800 2653 1.795768 TGTCAGTCGGCATGAAGAAC 58.204 50.000 0.00 0.0 0.00 3.01 R
2105 2963 6.441924 GGAATATCTCCAATATCCACCTCTGA 59.558 42.308 0.00 0.0 44.67 3.27 R
2336 3195 1.927895 CAGTGCCGAAGAGGATGTAC 58.072 55.000 0.00 0.0 45.00 2.90 R
2652 3512 0.036732 GCACTGGGTCTCCATTGTGA 59.963 55.000 8.40 0.0 43.29 3.58 R
4186 7067 0.106116 AAAACAACGGGCCCTTACCA 60.106 50.000 22.43 0.0 0.00 3.25 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.823353 TCGGTTAACAATCAAAACCTTCAC 58.177 37.500 8.10 0.00 40.44 3.18
24 25 4.673311 CGGTTAACAATCAAAACCTTCACG 59.327 41.667 8.10 0.00 40.44 4.35
25 26 4.979815 GGTTAACAATCAAAACCTTCACGG 59.020 41.667 8.10 0.00 39.66 4.94
26 27 2.793278 ACAATCAAAACCTTCACGGC 57.207 45.000 0.00 0.00 35.61 5.68
27 28 1.001815 ACAATCAAAACCTTCACGGCG 60.002 47.619 4.80 4.80 35.61 6.46
28 29 1.001815 CAATCAAAACCTTCACGGCGT 60.002 47.619 6.77 6.77 35.61 5.68
29 30 0.591170 ATCAAAACCTTCACGGCGTG 59.409 50.000 32.75 32.75 35.61 5.34
30 31 1.008995 CAAAACCTTCACGGCGTGG 60.009 57.895 36.30 24.71 35.61 4.94
31 32 1.452470 AAAACCTTCACGGCGTGGT 60.452 52.632 36.30 25.39 35.61 4.16
32 33 1.033202 AAAACCTTCACGGCGTGGTT 61.033 50.000 36.30 29.16 43.73 3.67
33 34 1.033202 AAACCTTCACGGCGTGGTTT 61.033 50.000 36.30 32.37 44.84 3.27
34 35 1.441732 AACCTTCACGGCGTGGTTTC 61.442 55.000 36.30 0.00 39.48 2.78
35 36 2.613506 CCTTCACGGCGTGGTTTCC 61.614 63.158 36.30 0.00 33.87 3.13
36 37 1.890041 CTTCACGGCGTGGTTTCCA 60.890 57.895 36.30 16.19 33.87 3.53
44 45 4.150994 GTGGTTTCCACGCCTGAA 57.849 55.556 3.12 0.00 44.95 3.02
45 46 2.641197 GTGGTTTCCACGCCTGAAT 58.359 52.632 3.12 0.00 44.95 2.57
46 47 0.521735 GTGGTTTCCACGCCTGAATC 59.478 55.000 3.12 0.00 44.95 2.52
47 48 0.400213 TGGTTTCCACGCCTGAATCT 59.600 50.000 0.00 0.00 0.00 2.40
48 49 1.087501 GGTTTCCACGCCTGAATCTC 58.912 55.000 0.00 0.00 0.00 2.75
49 50 1.339151 GGTTTCCACGCCTGAATCTCT 60.339 52.381 0.00 0.00 0.00 3.10
50 51 2.427506 GTTTCCACGCCTGAATCTCTT 58.572 47.619 0.00 0.00 0.00 2.85
51 52 2.099141 TTCCACGCCTGAATCTCTTG 57.901 50.000 0.00 0.00 0.00 3.02
52 53 0.976641 TCCACGCCTGAATCTCTTGT 59.023 50.000 0.00 0.00 0.00 3.16
53 54 1.347707 TCCACGCCTGAATCTCTTGTT 59.652 47.619 0.00 0.00 0.00 2.83
54 55 2.565391 TCCACGCCTGAATCTCTTGTTA 59.435 45.455 0.00 0.00 0.00 2.41
55 56 2.932614 CCACGCCTGAATCTCTTGTTAG 59.067 50.000 0.00 0.00 0.00 2.34
56 57 2.349886 CACGCCTGAATCTCTTGTTAGC 59.650 50.000 0.00 0.00 0.00 3.09
57 58 1.590238 CGCCTGAATCTCTTGTTAGCG 59.410 52.381 0.00 0.00 34.70 4.26
58 59 1.936547 GCCTGAATCTCTTGTTAGCGG 59.063 52.381 0.00 0.00 0.00 5.52
59 60 2.418746 GCCTGAATCTCTTGTTAGCGGA 60.419 50.000 0.00 0.00 0.00 5.54
60 61 3.190874 CCTGAATCTCTTGTTAGCGGAC 58.809 50.000 0.00 0.00 0.00 4.79
61 62 3.190874 CTGAATCTCTTGTTAGCGGACC 58.809 50.000 0.00 0.00 0.00 4.46
62 63 2.194271 GAATCTCTTGTTAGCGGACCG 58.806 52.381 10.29 10.29 0.00 4.79
74 75 3.083997 GGACCGCACCTCCTCCAT 61.084 66.667 0.00 0.00 0.00 3.41
75 76 2.501610 GACCGCACCTCCTCCATC 59.498 66.667 0.00 0.00 0.00 3.51
76 77 3.432051 GACCGCACCTCCTCCATCG 62.432 68.421 0.00 0.00 0.00 3.84
77 78 3.147595 CCGCACCTCCTCCATCGA 61.148 66.667 0.00 0.00 0.00 3.59
78 79 2.415010 CGCACCTCCTCCATCGAG 59.585 66.667 0.00 0.00 35.72 4.04
79 80 2.121538 CGCACCTCCTCCATCGAGA 61.122 63.158 0.00 0.00 38.52 4.04
80 81 1.739049 GCACCTCCTCCATCGAGAG 59.261 63.158 0.00 0.00 38.52 3.20
81 82 1.040339 GCACCTCCTCCATCGAGAGT 61.040 60.000 0.00 0.00 38.52 3.24
82 83 1.479709 CACCTCCTCCATCGAGAGTT 58.520 55.000 0.00 0.00 38.52 3.01
83 84 1.135915 CACCTCCTCCATCGAGAGTTG 59.864 57.143 0.00 0.00 38.52 3.16
84 85 1.006043 ACCTCCTCCATCGAGAGTTGA 59.994 52.381 0.00 0.00 38.52 3.18
85 86 1.680735 CCTCCTCCATCGAGAGTTGAG 59.319 57.143 0.00 0.00 38.52 3.02
86 87 1.680735 CTCCTCCATCGAGAGTTGAGG 59.319 57.143 10.54 10.54 38.52 3.86
87 88 0.103937 CCTCCATCGAGAGTTGAGGC 59.896 60.000 0.00 0.00 38.52 4.70
88 89 0.248825 CTCCATCGAGAGTTGAGGCG 60.249 60.000 0.00 0.00 38.52 5.52
89 90 0.965866 TCCATCGAGAGTTGAGGCGT 60.966 55.000 0.00 0.00 32.62 5.68
90 91 0.803768 CCATCGAGAGTTGAGGCGTG 60.804 60.000 0.00 0.00 32.62 5.34
91 92 0.171231 CATCGAGAGTTGAGGCGTGA 59.829 55.000 0.00 0.00 32.62 4.35
92 93 1.107114 ATCGAGAGTTGAGGCGTGAT 58.893 50.000 0.00 0.00 0.00 3.06
93 94 1.746470 TCGAGAGTTGAGGCGTGATA 58.254 50.000 0.00 0.00 0.00 2.15
94 95 2.089201 TCGAGAGTTGAGGCGTGATAA 58.911 47.619 0.00 0.00 0.00 1.75
95 96 2.097629 TCGAGAGTTGAGGCGTGATAAG 59.902 50.000 0.00 0.00 0.00 1.73
96 97 2.197577 GAGAGTTGAGGCGTGATAAGC 58.802 52.381 0.00 0.00 0.00 3.09
97 98 1.550524 AGAGTTGAGGCGTGATAAGCA 59.449 47.619 0.00 0.00 36.08 3.91
98 99 1.929836 GAGTTGAGGCGTGATAAGCAG 59.070 52.381 0.00 0.00 36.08 4.24
99 100 1.009829 GTTGAGGCGTGATAAGCAGG 58.990 55.000 0.00 0.00 36.08 4.85
100 101 0.901827 TTGAGGCGTGATAAGCAGGA 59.098 50.000 0.00 0.00 34.35 3.86
101 102 0.461548 TGAGGCGTGATAAGCAGGAG 59.538 55.000 0.00 0.00 34.35 3.69
102 103 0.461961 GAGGCGTGATAAGCAGGAGT 59.538 55.000 0.00 0.00 34.35 3.85
103 104 0.905357 AGGCGTGATAAGCAGGAGTT 59.095 50.000 0.00 0.00 34.35 3.01
104 105 2.100916 GAGGCGTGATAAGCAGGAGTTA 59.899 50.000 0.00 0.00 34.35 2.24
105 106 2.500098 AGGCGTGATAAGCAGGAGTTAA 59.500 45.455 0.00 0.00 34.35 2.01
106 107 2.608090 GGCGTGATAAGCAGGAGTTAAC 59.392 50.000 0.00 0.00 34.35 2.01
107 108 3.522553 GCGTGATAAGCAGGAGTTAACT 58.477 45.455 8.13 8.13 34.35 2.24
108 109 3.552294 GCGTGATAAGCAGGAGTTAACTC 59.448 47.826 24.73 24.73 37.12 3.01
118 119 2.570442 GAGTTAACTCCCGAGCTCTG 57.430 55.000 22.74 4.96 37.02 3.35
119 120 0.533032 AGTTAACTCCCGAGCTCTGC 59.467 55.000 12.85 0.00 0.00 4.26
120 121 0.533032 GTTAACTCCCGAGCTCTGCT 59.467 55.000 12.85 0.00 43.88 4.24
121 122 5.578245 GAGTTAACTCCCGAGCTCTGCTC 62.578 56.522 22.74 9.29 42.97 4.26
131 132 1.194218 AGCTCTGCTCTCTTTCTCCC 58.806 55.000 0.00 0.00 30.62 4.30
132 133 0.901124 GCTCTGCTCTCTTTCTCCCA 59.099 55.000 0.00 0.00 0.00 4.37
133 134 1.405391 GCTCTGCTCTCTTTCTCCCAC 60.405 57.143 0.00 0.00 0.00 4.61
134 135 2.178580 CTCTGCTCTCTTTCTCCCACT 58.821 52.381 0.00 0.00 0.00 4.00
135 136 2.566724 CTCTGCTCTCTTTCTCCCACTT 59.433 50.000 0.00 0.00 0.00 3.16
136 137 2.564947 TCTGCTCTCTTTCTCCCACTTC 59.435 50.000 0.00 0.00 0.00 3.01
137 138 1.273606 TGCTCTCTTTCTCCCACTTCG 59.726 52.381 0.00 0.00 0.00 3.79
138 139 1.404851 GCTCTCTTTCTCCCACTTCGG 60.405 57.143 0.00 0.00 0.00 4.30
139 140 0.608640 TCTCTTTCTCCCACTTCGGC 59.391 55.000 0.00 0.00 0.00 5.54
140 141 0.391793 CTCTTTCTCCCACTTCGGCC 60.392 60.000 0.00 0.00 0.00 6.13
141 142 1.125093 TCTTTCTCCCACTTCGGCCA 61.125 55.000 2.24 0.00 0.00 5.36
142 143 0.250727 CTTTCTCCCACTTCGGCCAA 60.251 55.000 2.24 0.00 0.00 4.52
143 144 0.183971 TTTCTCCCACTTCGGCCAAA 59.816 50.000 2.24 0.00 0.00 3.28
144 145 0.250727 TTCTCCCACTTCGGCCAAAG 60.251 55.000 0.58 0.58 0.00 2.77
145 146 1.675641 CTCCCACTTCGGCCAAAGG 60.676 63.158 8.63 0.00 0.00 3.11
146 147 2.115266 CCCACTTCGGCCAAAGGT 59.885 61.111 8.63 0.00 0.00 3.50
147 148 1.971695 CCCACTTCGGCCAAAGGTC 60.972 63.158 8.63 0.00 0.00 3.85
148 149 1.073199 CCACTTCGGCCAAAGGTCT 59.927 57.895 8.63 0.00 0.00 3.85
149 150 0.955919 CCACTTCGGCCAAAGGTCTC 60.956 60.000 8.63 0.00 0.00 3.36
150 151 0.035458 CACTTCGGCCAAAGGTCTCT 59.965 55.000 8.63 0.00 0.00 3.10
151 152 0.035458 ACTTCGGCCAAAGGTCTCTG 59.965 55.000 8.63 0.00 0.00 3.35
152 153 0.035458 CTTCGGCCAAAGGTCTCTGT 59.965 55.000 2.24 0.00 0.00 3.41
153 154 1.275291 CTTCGGCCAAAGGTCTCTGTA 59.725 52.381 2.24 0.00 0.00 2.74
154 155 1.568504 TCGGCCAAAGGTCTCTGTAT 58.431 50.000 2.24 0.00 0.00 2.29
155 156 1.207089 TCGGCCAAAGGTCTCTGTATG 59.793 52.381 2.24 0.00 0.00 2.39
156 157 1.743772 CGGCCAAAGGTCTCTGTATGG 60.744 57.143 2.24 0.00 0.00 2.74
157 158 1.559682 GGCCAAAGGTCTCTGTATGGA 59.440 52.381 0.00 0.00 0.00 3.41
158 159 2.026262 GGCCAAAGGTCTCTGTATGGAA 60.026 50.000 0.00 0.00 0.00 3.53
159 160 3.274288 GCCAAAGGTCTCTGTATGGAAG 58.726 50.000 0.00 0.00 0.00 3.46
160 161 3.055094 GCCAAAGGTCTCTGTATGGAAGA 60.055 47.826 0.00 0.00 0.00 2.87
161 162 4.384647 GCCAAAGGTCTCTGTATGGAAGAT 60.385 45.833 0.00 0.00 0.00 2.40
162 163 5.121811 CCAAAGGTCTCTGTATGGAAGATG 58.878 45.833 0.00 0.00 0.00 2.90
163 164 5.104776 CCAAAGGTCTCTGTATGGAAGATGA 60.105 44.000 0.00 0.00 0.00 2.92
164 165 5.606348 AAGGTCTCTGTATGGAAGATGAC 57.394 43.478 0.00 0.00 0.00 3.06
165 166 3.964031 AGGTCTCTGTATGGAAGATGACC 59.036 47.826 0.00 0.00 39.60 4.02
166 167 3.706594 GGTCTCTGTATGGAAGATGACCA 59.293 47.826 0.00 0.00 39.38 4.02
167 168 4.162320 GGTCTCTGTATGGAAGATGACCAA 59.838 45.833 0.00 0.00 39.38 3.67
168 169 5.163258 GGTCTCTGTATGGAAGATGACCAAT 60.163 44.000 0.00 0.00 39.38 3.16
169 170 5.757320 GTCTCTGTATGGAAGATGACCAATG 59.243 44.000 0.00 0.00 40.93 2.82
170 171 5.039920 TCTGTATGGAAGATGACCAATGG 57.960 43.478 0.00 0.00 40.93 3.16
171 172 3.554934 TGTATGGAAGATGACCAATGGC 58.445 45.455 0.00 0.00 40.93 4.40
172 173 3.202818 TGTATGGAAGATGACCAATGGCT 59.797 43.478 0.00 0.00 40.93 4.75
173 174 2.133281 TGGAAGATGACCAATGGCTG 57.867 50.000 0.00 0.00 34.25 4.85
174 175 1.634973 TGGAAGATGACCAATGGCTGA 59.365 47.619 0.00 0.00 34.25 4.26
175 176 2.041485 TGGAAGATGACCAATGGCTGAA 59.959 45.455 0.00 0.00 34.25 3.02
176 177 3.294214 GGAAGATGACCAATGGCTGAAT 58.706 45.455 0.00 0.00 0.00 2.57
177 178 3.703052 GGAAGATGACCAATGGCTGAATT 59.297 43.478 0.00 0.00 0.00 2.17
178 179 4.889409 GGAAGATGACCAATGGCTGAATTA 59.111 41.667 0.00 0.00 0.00 1.40
179 180 5.221126 GGAAGATGACCAATGGCTGAATTAC 60.221 44.000 0.00 0.00 0.00 1.89
180 181 4.210331 AGATGACCAATGGCTGAATTACC 58.790 43.478 0.00 0.00 0.00 2.85
181 182 3.448093 TGACCAATGGCTGAATTACCA 57.552 42.857 0.00 0.00 41.06 3.25
182 183 3.355378 TGACCAATGGCTGAATTACCAG 58.645 45.455 0.00 0.00 39.88 4.00
202 203 3.808726 CAGCTAATGGATGACTGAGAAGC 59.191 47.826 0.00 0.00 32.28 3.86
203 204 3.137533 GCTAATGGATGACTGAGAAGCC 58.862 50.000 0.00 0.00 0.00 4.35
204 205 2.322355 AATGGATGACTGAGAAGCCG 57.678 50.000 0.00 0.00 0.00 5.52
205 206 0.467384 ATGGATGACTGAGAAGCCGG 59.533 55.000 0.00 0.00 0.00 6.13
206 207 0.904865 TGGATGACTGAGAAGCCGGT 60.905 55.000 1.90 0.00 0.00 5.28
207 208 0.250513 GGATGACTGAGAAGCCGGTT 59.749 55.000 1.90 0.00 0.00 4.44
208 209 1.480954 GGATGACTGAGAAGCCGGTTA 59.519 52.381 1.90 0.00 0.00 2.85
209 210 2.482142 GGATGACTGAGAAGCCGGTTAG 60.482 54.545 1.90 0.00 0.00 2.34
210 211 1.629043 TGACTGAGAAGCCGGTTAGT 58.371 50.000 1.90 0.00 0.00 2.24
211 212 1.544691 TGACTGAGAAGCCGGTTAGTC 59.455 52.381 10.96 10.96 36.11 2.59
212 213 1.544691 GACTGAGAAGCCGGTTAGTCA 59.455 52.381 12.53 7.91 35.75 3.41
213 214 1.546476 ACTGAGAAGCCGGTTAGTCAG 59.454 52.381 21.38 21.38 36.20 3.51
214 215 0.895530 TGAGAAGCCGGTTAGTCAGG 59.104 55.000 1.90 0.00 34.52 3.86
215 216 1.183549 GAGAAGCCGGTTAGTCAGGA 58.816 55.000 1.90 0.00 33.18 3.86
216 217 1.135333 GAGAAGCCGGTTAGTCAGGAG 59.865 57.143 1.90 0.00 33.18 3.69
217 218 0.175989 GAAGCCGGTTAGTCAGGAGG 59.824 60.000 1.90 0.00 33.18 4.30
218 219 0.252103 AAGCCGGTTAGTCAGGAGGA 60.252 55.000 1.90 0.00 33.18 3.71
219 220 0.684805 AGCCGGTTAGTCAGGAGGAG 60.685 60.000 1.90 0.00 33.18 3.69
220 221 1.817209 CCGGTTAGTCAGGAGGAGC 59.183 63.158 0.00 0.00 33.18 4.70
221 222 1.677637 CCGGTTAGTCAGGAGGAGCC 61.678 65.000 0.00 0.00 33.18 4.70
222 223 1.817209 GGTTAGTCAGGAGGAGCCG 59.183 63.158 0.00 0.00 43.43 5.52
223 224 1.677637 GGTTAGTCAGGAGGAGCCGG 61.678 65.000 0.00 0.00 43.43 6.13
224 225 0.683504 GTTAGTCAGGAGGAGCCGGA 60.684 60.000 5.05 0.00 43.43 5.14
225 226 0.395862 TTAGTCAGGAGGAGCCGGAG 60.396 60.000 5.05 0.00 41.73 4.63
226 227 1.279749 TAGTCAGGAGGAGCCGGAGA 61.280 60.000 5.05 0.00 41.73 3.71
227 228 2.043852 TCAGGAGGAGCCGGAGAC 60.044 66.667 5.05 0.00 43.43 3.36
228 229 2.043450 CAGGAGGAGCCGGAGACT 60.043 66.667 5.05 0.00 43.43 3.24
229 230 2.043450 AGGAGGAGCCGGAGACTG 60.043 66.667 5.05 0.00 43.43 3.51
230 231 3.151022 GGAGGAGCCGGAGACTGG 61.151 72.222 5.05 0.00 0.00 4.00
231 232 3.151022 GAGGAGCCGGAGACTGGG 61.151 72.222 5.05 0.00 0.00 4.45
232 233 3.663815 GAGGAGCCGGAGACTGGGA 62.664 68.421 5.05 0.00 0.00 4.37
233 234 2.444895 GGAGCCGGAGACTGGGAT 60.445 66.667 5.05 0.00 0.00 3.85
234 235 2.503382 GGAGCCGGAGACTGGGATC 61.503 68.421 5.05 0.00 37.99 3.36
235 236 1.456705 GAGCCGGAGACTGGGATCT 60.457 63.158 5.05 0.00 35.86 2.75
236 237 1.002274 AGCCGGAGACTGGGATCTT 59.998 57.895 5.05 0.00 0.00 2.40
237 238 0.261991 AGCCGGAGACTGGGATCTTA 59.738 55.000 5.05 0.00 0.00 2.10
238 239 1.120530 GCCGGAGACTGGGATCTTAA 58.879 55.000 5.05 0.00 0.00 1.85
239 240 1.485066 GCCGGAGACTGGGATCTTAAA 59.515 52.381 5.05 0.00 0.00 1.52
240 241 2.093128 GCCGGAGACTGGGATCTTAAAA 60.093 50.000 5.05 0.00 0.00 1.52
241 242 3.532542 CCGGAGACTGGGATCTTAAAAC 58.467 50.000 0.00 0.00 0.00 2.43
242 243 3.532542 CGGAGACTGGGATCTTAAAACC 58.467 50.000 0.00 0.00 0.00 3.27
243 244 3.055385 CGGAGACTGGGATCTTAAAACCA 60.055 47.826 0.00 0.00 0.00 3.67
244 245 4.564821 CGGAGACTGGGATCTTAAAACCAA 60.565 45.833 0.00 0.00 31.63 3.67
245 246 4.700692 GGAGACTGGGATCTTAAAACCAAC 59.299 45.833 0.00 0.00 31.63 3.77
246 247 5.515008 GGAGACTGGGATCTTAAAACCAACT 60.515 44.000 0.00 0.00 31.63 3.16
247 248 5.561679 AGACTGGGATCTTAAAACCAACTC 58.438 41.667 0.00 0.00 31.63 3.01
248 249 4.324267 ACTGGGATCTTAAAACCAACTCG 58.676 43.478 0.00 0.00 31.63 4.18
249 250 3.681593 TGGGATCTTAAAACCAACTCGG 58.318 45.455 0.00 0.00 42.50 4.63
250 251 2.422479 GGGATCTTAAAACCAACTCGGC 59.578 50.000 0.00 0.00 39.03 5.54
251 252 3.344515 GGATCTTAAAACCAACTCGGCT 58.655 45.455 0.00 0.00 39.03 5.52
252 253 3.127030 GGATCTTAAAACCAACTCGGCTG 59.873 47.826 0.00 0.00 39.03 4.85
253 254 1.877443 TCTTAAAACCAACTCGGCTGC 59.123 47.619 0.00 0.00 39.03 5.25
254 255 1.880027 CTTAAAACCAACTCGGCTGCT 59.120 47.619 0.00 0.00 39.03 4.24
255 256 1.519408 TAAAACCAACTCGGCTGCTC 58.481 50.000 0.00 0.00 39.03 4.26
256 257 0.465460 AAAACCAACTCGGCTGCTCA 60.465 50.000 0.00 0.00 39.03 4.26
257 258 0.250901 AAACCAACTCGGCTGCTCAT 60.251 50.000 0.00 0.00 39.03 2.90
258 259 0.613260 AACCAACTCGGCTGCTCATA 59.387 50.000 0.00 0.00 39.03 2.15
259 260 0.108138 ACCAACTCGGCTGCTCATAC 60.108 55.000 0.00 0.00 39.03 2.39
260 261 0.176680 CCAACTCGGCTGCTCATACT 59.823 55.000 0.00 0.00 0.00 2.12
261 262 1.565305 CAACTCGGCTGCTCATACTC 58.435 55.000 0.00 0.00 0.00 2.59
262 263 0.101399 AACTCGGCTGCTCATACTCG 59.899 55.000 0.00 0.00 0.00 4.18
263 264 0.748367 ACTCGGCTGCTCATACTCGA 60.748 55.000 0.00 0.00 0.00 4.04
264 265 0.382158 CTCGGCTGCTCATACTCGAA 59.618 55.000 0.00 0.00 0.00 3.71
265 266 0.100682 TCGGCTGCTCATACTCGAAC 59.899 55.000 0.00 0.00 0.00 3.95
266 267 0.101399 CGGCTGCTCATACTCGAACT 59.899 55.000 0.00 0.00 0.00 3.01
267 268 1.846541 GGCTGCTCATACTCGAACTC 58.153 55.000 0.00 0.00 0.00 3.01
268 269 1.471964 GCTGCTCATACTCGAACTCG 58.528 55.000 0.00 0.00 41.45 4.18
269 270 1.862008 GCTGCTCATACTCGAACTCGG 60.862 57.143 0.00 0.00 40.29 4.63
270 271 0.100682 TGCTCATACTCGAACTCGGC 59.899 55.000 0.00 0.00 40.29 5.54
271 272 0.382515 GCTCATACTCGAACTCGGCT 59.617 55.000 0.00 0.00 40.29 5.52
272 273 1.862008 GCTCATACTCGAACTCGGCTG 60.862 57.143 0.00 0.00 40.29 4.85
273 274 0.738975 TCATACTCGAACTCGGCTGG 59.261 55.000 0.00 0.00 40.29 4.85
274 275 0.456221 CATACTCGAACTCGGCTGGT 59.544 55.000 0.00 0.00 40.29 4.00
275 276 0.456221 ATACTCGAACTCGGCTGGTG 59.544 55.000 0.00 0.00 40.29 4.17
276 277 0.892358 TACTCGAACTCGGCTGGTGT 60.892 55.000 0.00 0.00 40.29 4.16
277 278 1.444553 CTCGAACTCGGCTGGTGTC 60.445 63.158 0.00 0.00 40.29 3.67
278 279 2.142357 CTCGAACTCGGCTGGTGTCA 62.142 60.000 0.00 0.00 40.29 3.58
279 280 1.300620 CGAACTCGGCTGGTGTCAA 60.301 57.895 0.00 0.00 35.37 3.18
280 281 1.557443 CGAACTCGGCTGGTGTCAAC 61.557 60.000 0.00 0.00 35.37 3.18
281 282 1.557443 GAACTCGGCTGGTGTCAACG 61.557 60.000 0.00 0.00 0.00 4.10
282 283 2.023414 AACTCGGCTGGTGTCAACGA 62.023 55.000 0.00 0.00 33.44 3.85
283 284 2.022129 CTCGGCTGGTGTCAACGAC 61.022 63.158 0.00 0.00 31.93 4.34
284 285 3.041940 CGGCTGGTGTCAACGACC 61.042 66.667 0.00 0.00 0.00 4.79
285 286 2.110213 GGCTGGTGTCAACGACCA 59.890 61.111 0.00 0.00 41.37 4.02
286 287 1.302511 GGCTGGTGTCAACGACCAT 60.303 57.895 0.00 0.00 42.69 3.55
317 318 4.980805 GGGCGCGGTGACAACTGA 62.981 66.667 8.83 0.00 34.25 3.41
321 322 1.300620 CGCGGTGACAACTGAGGAA 60.301 57.895 0.00 0.00 34.25 3.36
324 325 1.557443 CGGTGACAACTGAGGAACGC 61.557 60.000 0.00 0.00 34.25 4.84
350 351 4.090588 GTCGGGATGGGGCGACAA 62.091 66.667 0.00 0.00 0.00 3.18
380 381 2.973082 GGCAGGGTTCACAATGGC 59.027 61.111 0.00 0.00 0.00 4.40
388 389 1.301322 TTCACAATGGCTGCGTCGA 60.301 52.632 0.00 0.00 0.00 4.20
390 391 0.673333 TCACAATGGCTGCGTCGAAT 60.673 50.000 0.00 0.00 0.00 3.34
393 394 0.659427 CAATGGCTGCGTCGAATGAT 59.341 50.000 0.00 0.00 0.00 2.45
409 411 0.178906 TGATGCCGAGGGATGGGATA 60.179 55.000 0.00 0.00 37.71 2.59
414 416 1.127567 CCGAGGGATGGGATAAGGCA 61.128 60.000 0.00 0.00 0.00 4.75
416 418 1.065854 CGAGGGATGGGATAAGGCATC 60.066 57.143 0.00 0.00 0.00 3.91
471 473 3.727258 CGAAGGTGGGATGGGGCA 61.727 66.667 0.00 0.00 0.00 5.36
473 475 4.066139 AAGGTGGGATGGGGCAGC 62.066 66.667 0.00 0.00 0.00 5.25
526 529 3.432933 CCACCGCTTTTGGATTTTTGATG 59.567 43.478 0.00 0.00 36.02 3.07
534 537 3.296322 TGGATTTTTGATGGCGTGTTC 57.704 42.857 0.00 0.00 0.00 3.18
670 970 6.485171 ACATAGGTTTTGGAAGTCTGCTATT 58.515 36.000 0.00 0.00 0.00 1.73
671 971 7.630082 ACATAGGTTTTGGAAGTCTGCTATTA 58.370 34.615 0.00 0.00 0.00 0.98
672 972 7.770897 ACATAGGTTTTGGAAGTCTGCTATTAG 59.229 37.037 0.00 0.00 0.00 1.73
673 973 6.374417 AGGTTTTGGAAGTCTGCTATTAGA 57.626 37.500 0.00 0.00 0.00 2.10
674 974 6.410540 AGGTTTTGGAAGTCTGCTATTAGAG 58.589 40.000 0.00 0.00 0.00 2.43
675 975 6.213600 AGGTTTTGGAAGTCTGCTATTAGAGA 59.786 38.462 0.00 0.00 0.00 3.10
676 976 7.051000 GGTTTTGGAAGTCTGCTATTAGAGAT 58.949 38.462 0.00 0.00 0.00 2.75
677 977 7.554476 GGTTTTGGAAGTCTGCTATTAGAGATT 59.446 37.037 0.00 0.00 0.00 2.40
678 978 8.951243 GTTTTGGAAGTCTGCTATTAGAGATTT 58.049 33.333 0.00 0.00 0.00 2.17
679 979 8.723942 TTTGGAAGTCTGCTATTAGAGATTTC 57.276 34.615 13.69 13.69 35.35 2.17
680 980 7.423844 TGGAAGTCTGCTATTAGAGATTTCA 57.576 36.000 18.61 10.07 36.92 2.69
681 981 7.268586 TGGAAGTCTGCTATTAGAGATTTCAC 58.731 38.462 18.61 13.16 36.92 3.18
682 982 7.093333 TGGAAGTCTGCTATTAGAGATTTCACA 60.093 37.037 18.61 14.44 36.92 3.58
683 983 7.930865 GGAAGTCTGCTATTAGAGATTTCACAT 59.069 37.037 18.61 0.00 36.92 3.21
684 984 9.973450 GAAGTCTGCTATTAGAGATTTCACATA 57.027 33.333 15.43 0.00 35.86 2.29
685 985 9.979578 AAGTCTGCTATTAGAGATTTCACATAG 57.020 33.333 0.00 0.00 0.00 2.23
686 986 8.584157 AGTCTGCTATTAGAGATTTCACATAGG 58.416 37.037 0.00 0.00 0.00 2.57
687 987 8.364142 GTCTGCTATTAGAGATTTCACATAGGT 58.636 37.037 0.00 0.00 0.00 3.08
688 988 8.928448 TCTGCTATTAGAGATTTCACATAGGTT 58.072 33.333 0.00 0.00 0.00 3.50
689 989 9.553064 CTGCTATTAGAGATTTCACATAGGTTT 57.447 33.333 0.00 0.00 0.00 3.27
690 990 9.905713 TGCTATTAGAGATTTCACATAGGTTTT 57.094 29.630 0.00 0.00 0.00 2.43
694 994 8.792830 TTAGAGATTTCACATAGGTTTTGGAG 57.207 34.615 0.00 0.00 0.00 3.86
695 995 6.784031 AGAGATTTCACATAGGTTTTGGAGT 58.216 36.000 0.00 0.00 0.00 3.85
696 996 6.881602 AGAGATTTCACATAGGTTTTGGAGTC 59.118 38.462 0.00 0.00 0.00 3.36
697 997 6.784031 AGATTTCACATAGGTTTTGGAGTCT 58.216 36.000 0.00 0.00 0.00 3.24
698 998 6.656693 AGATTTCACATAGGTTTTGGAGTCTG 59.343 38.462 0.00 0.00 0.00 3.51
699 999 3.674997 TCACATAGGTTTTGGAGTCTGC 58.325 45.455 0.00 0.00 0.00 4.26
700 1000 3.327757 TCACATAGGTTTTGGAGTCTGCT 59.672 43.478 0.00 0.00 0.00 4.24
701 1001 4.530553 TCACATAGGTTTTGGAGTCTGCTA 59.469 41.667 0.00 0.00 0.00 3.49
702 1002 5.189736 TCACATAGGTTTTGGAGTCTGCTAT 59.810 40.000 0.00 0.00 0.00 2.97
814 1625 2.967201 TCGTTCTACTCCTGGTTTGGAA 59.033 45.455 0.00 0.00 35.43 3.53
829 1640 3.670377 GAAGCACGGCACCAACCC 61.670 66.667 0.00 0.00 0.00 4.11
832 1646 4.279043 GCACGGCACCAACCCAAC 62.279 66.667 0.00 0.00 0.00 3.77
1026 1856 2.202932 CAGATCCCCAAGGTCGCG 60.203 66.667 0.00 0.00 0.00 5.87
1273 2104 3.726517 CCTCGCACCACCGCTTTG 61.727 66.667 0.00 0.00 0.00 2.77
1281 2112 2.027625 CCACCGCTTTGACGTCCTC 61.028 63.158 14.12 0.00 0.00 3.71
1284 2115 1.372499 CCGCTTTGACGTCCTCGAA 60.372 57.895 14.12 0.00 40.62 3.71
1292 2123 3.380479 TGACGTCCTCGAAGATTGTTT 57.620 42.857 14.12 0.00 40.62 2.83
1314 2145 1.014352 ACCTATTTTCGCCACGATGC 58.986 50.000 0.00 0.00 35.23 3.91
1381 2212 7.180322 TGAGAAATCAGCTTCACTAGATTCT 57.820 36.000 0.00 0.00 30.59 2.40
1596 2441 4.157840 TGAGATACAGCATCGTAGTTGTGT 59.842 41.667 8.90 3.51 38.81 3.72
1641 2492 5.639506 TGCAGTGAAGTTACTTCTAAGCATC 59.360 40.000 23.27 8.73 40.73 3.91
1675 2527 8.746052 TGTTATTAAAGATGGTGTTGGGATAG 57.254 34.615 0.00 0.00 0.00 2.08
1719 2572 9.429359 CAAGAGCTAATCGTTTAATATCTCCAT 57.571 33.333 0.00 0.00 0.00 3.41
1776 2629 5.829391 TGGATTAATTATGCTGCAGTGACAT 59.171 36.000 16.64 12.65 0.00 3.06
1792 2645 7.552330 TGCAGTGACATGTTATTCAGCTTATAA 59.448 33.333 0.00 0.00 0.00 0.98
1793 2646 8.562892 GCAGTGACATGTTATTCAGCTTATAAT 58.437 33.333 0.00 0.00 0.00 1.28
1841 2699 3.316283 TCTTTTGGCGATGTGATTTTGC 58.684 40.909 0.00 0.00 0.00 3.68
2116 2974 8.277197 TCTATTTGAATCAAATCAGAGGTGGAT 58.723 33.333 22.74 0.42 42.19 3.41
2326 3185 9.803315 GATCCAAAGTCCAAGGTATTTTATTTC 57.197 33.333 0.00 0.00 0.00 2.17
2349 3208 4.177026 CAAGAGTTGGTACATCCTCTTCG 58.823 47.826 13.92 8.66 46.78 3.79
2463 3323 9.325198 CTTCTGCCCTTAAAGTTAAAATTTGTT 57.675 29.630 0.00 0.00 0.00 2.83
2511 3371 9.598517 ACTTTTGTTTCTGAAATCATTGCTTTA 57.401 25.926 6.06 0.00 0.00 1.85
2521 3381 9.199982 CTGAAATCATTGCTTTAAAACAGTGAT 57.800 29.630 18.57 18.57 42.81 3.06
2526 3386 9.979578 ATCATTGCTTTAAAACAGTGATACAAA 57.020 25.926 21.31 2.00 40.26 2.83
2538 3398 3.826157 AGTGATACAAACACATGGGTTGG 59.174 43.478 15.51 14.69 40.25 3.77
2549 3409 5.014202 ACACATGGGTTGGTTAATTAGGTC 58.986 41.667 0.00 0.00 0.00 3.85
2556 3416 8.626917 TGGGTTGGTTAATTAGGTCTATCTAA 57.373 34.615 0.00 0.00 34.23 2.10
2593 3453 4.792068 AGAAAGTTCACCACAATGGAGAA 58.208 39.130 0.84 2.58 43.23 2.87
2599 3459 3.433343 TCACCACAATGGAGAAATGCAT 58.567 40.909 0.84 0.00 40.96 3.96
2607 3467 2.089201 TGGAGAAATGCATGCTGACAG 58.911 47.619 20.33 0.00 0.00 3.51
2613 3473 4.986659 AGAAATGCATGCTGACAGAAAAAC 59.013 37.500 20.33 0.00 0.00 2.43
2616 3476 3.708890 TGCATGCTGACAGAAAAACAAG 58.291 40.909 20.33 0.00 0.00 3.16
2626 3486 6.042143 TGACAGAAAAACAAGCCAGAATTTC 58.958 36.000 0.00 0.00 0.00 2.17
2640 3500 6.525629 GCCAGAATTTCTAAGATAGGCTGTA 58.474 40.000 13.28 0.00 36.72 2.74
2641 3501 6.648725 GCCAGAATTTCTAAGATAGGCTGTAG 59.351 42.308 13.28 0.00 36.72 2.74
2642 3502 7.688083 GCCAGAATTTCTAAGATAGGCTGTAGT 60.688 40.741 13.28 0.00 36.72 2.73
2643 3503 8.207545 CCAGAATTTCTAAGATAGGCTGTAGTT 58.792 37.037 0.00 0.00 0.00 2.24
2644 3504 9.606631 CAGAATTTCTAAGATAGGCTGTAGTTT 57.393 33.333 0.00 0.00 0.00 2.66
2645 3505 9.825109 AGAATTTCTAAGATAGGCTGTAGTTTC 57.175 33.333 0.00 0.99 0.00 2.78
2647 3507 9.825109 AATTTCTAAGATAGGCTGTAGTTTCTC 57.175 33.333 0.00 0.00 0.00 2.87
2648 3508 7.956328 TTCTAAGATAGGCTGTAGTTTCTCA 57.044 36.000 0.00 0.00 0.00 3.27
2651 3511 6.613153 AAGATAGGCTGTAGTTTCTCAAGT 57.387 37.500 0.00 0.00 0.00 3.16
2652 3512 6.613153 AGATAGGCTGTAGTTTCTCAAGTT 57.387 37.500 0.00 0.00 0.00 2.66
2686 3553 2.096069 CCAGTGCGTTCAACTCTCAATG 60.096 50.000 0.00 0.00 0.00 2.82
2724 3599 3.206964 TGTAACTTGCGACATTGTGGAA 58.793 40.909 2.68 0.00 0.00 3.53
2770 3650 3.190327 TGAAGACGGGTGTATGCAATTTG 59.810 43.478 0.00 0.00 0.00 2.32
2776 3656 4.884744 ACGGGTGTATGCAATTTGCTATTA 59.115 37.500 21.19 8.61 45.31 0.98
2862 3742 7.664758 TCATAGAGATGACCAACTATCACATG 58.335 38.462 0.00 0.00 37.15 3.21
2882 3762 6.097554 CACATGTGGTCCTATCTTAGAGACTT 59.902 42.308 18.51 0.00 0.00 3.01
2888 3768 5.300792 GGTCCTATCTTAGAGACTTGGACTG 59.699 48.000 11.68 0.00 39.26 3.51
2910 3790 8.823220 ACTGGTTAGCCATTATTTGAAGTATT 57.177 30.769 0.00 0.00 45.05 1.89
2912 3792 8.232913 TGGTTAGCCATTATTTGAAGTATTCC 57.767 34.615 0.00 0.00 41.82 3.01
2931 3811 4.202245 TCCTTACTTCGATTGAGGTTGG 57.798 45.455 2.61 6.79 35.77 3.77
2980 3955 4.635765 TCCGGCATTCTTTATTTCAGAGTG 59.364 41.667 0.00 0.00 32.51 3.51
2983 3958 5.220739 CGGCATTCTTTATTTCAGAGTGGAG 60.221 44.000 0.00 0.00 30.57 3.86
2985 3960 5.728898 GCATTCTTTATTTCAGAGTGGAGCG 60.729 44.000 0.00 0.00 30.57 5.03
3002 3977 4.081697 TGGAGCGAATGTTTCTCTGACATA 60.082 41.667 0.00 0.00 36.76 2.29
3036 4011 5.772825 ACATTAGTGCACATTTGACTTGT 57.227 34.783 21.04 7.83 0.00 3.16
3207 4185 1.488393 AGCAGGGTAAAGCTCTCATCC 59.512 52.381 0.00 0.00 36.00 3.51
3227 4205 4.647611 TCCTGTGAAATTTGTATGTCGGT 58.352 39.130 0.00 0.00 0.00 4.69
3254 4232 6.425577 ACAACTTACTTACAAGCGAAAACA 57.574 33.333 0.00 0.00 0.00 2.83
3387 4365 3.357079 GTGAGGTGCCAAGTGCCG 61.357 66.667 0.00 0.00 40.16 5.69
3419 4401 0.320334 ATGATCACACGCAACGGTCA 60.320 50.000 0.00 0.00 0.00 4.02
3424 4406 2.249309 CACGCAACGGTCAGCAAG 59.751 61.111 6.38 0.00 0.00 4.01
3530 4512 7.806690 TGTGCTGTAACTTCTGAAATGATAAC 58.193 34.615 0.00 0.00 0.00 1.89
3614 4609 3.001086 TGGAGTGATATAGGGGGCTCTA 58.999 50.000 0.00 0.00 0.00 2.43
3618 4613 3.018149 GTGATATAGGGGGCTCTACTCG 58.982 54.545 0.00 0.00 0.00 4.18
3622 4617 2.923634 TAGGGGGCTCTACTCGGCAC 62.924 65.000 0.00 0.00 0.00 5.01
3642 4637 1.136085 CGTTTGTTGTATGCCGGAGTG 60.136 52.381 5.05 0.00 0.00 3.51
3644 4639 2.264005 TTGTTGTATGCCGGAGTGTT 57.736 45.000 5.05 0.00 0.00 3.32
3704 4717 0.804989 GCTGTTCACTGTATGGCCAC 59.195 55.000 8.16 0.00 0.00 5.01
3711 4724 1.065199 CACTGTATGGCCACCTGACAT 60.065 52.381 8.16 0.00 0.00 3.06
3724 4737 6.397272 GCCACCTGACATGAAATTTCAAATA 58.603 36.000 23.91 10.43 41.13 1.40
3734 4747 9.362539 ACATGAAATTTCAAATACTTCAGATGC 57.637 29.630 23.91 0.00 41.13 3.91
3752 4765 7.330262 TCAGATGCTTCATGTGAATTGTACTA 58.670 34.615 4.46 0.00 40.36 1.82
3756 4769 8.654230 ATGCTTCATGTGAATTGTACTAGTAG 57.346 34.615 1.87 0.00 33.01 2.57
3798 4811 6.137794 TCTTTGCCGAATTTTACACTGAAA 57.862 33.333 0.00 0.00 0.00 2.69
3799 4812 6.565234 TCTTTGCCGAATTTTACACTGAAAA 58.435 32.000 0.00 0.00 33.04 2.29
3816 4829 4.054671 TGAAAATTGAATGTGAAACCGGC 58.945 39.130 0.00 0.00 34.36 6.13
3817 4830 3.742433 AAATTGAATGTGAAACCGGCA 57.258 38.095 0.00 0.00 34.36 5.69
3818 4831 3.959535 AATTGAATGTGAAACCGGCAT 57.040 38.095 0.00 0.00 34.36 4.40
3819 4832 3.959535 ATTGAATGTGAAACCGGCATT 57.040 38.095 0.00 1.98 35.78 3.56
3820 4833 5.398603 AATTGAATGTGAAACCGGCATTA 57.601 34.783 0.00 0.00 33.56 1.90
3821 4834 4.433186 TTGAATGTGAAACCGGCATTAG 57.567 40.909 0.00 0.00 33.56 1.73
3822 4835 3.417101 TGAATGTGAAACCGGCATTAGT 58.583 40.909 0.00 0.00 33.56 2.24
3823 4836 3.823873 TGAATGTGAAACCGGCATTAGTT 59.176 39.130 0.00 0.00 33.56 2.24
3830 4843 0.676782 ACCGGCATTAGTTCCTGCAC 60.677 55.000 0.00 0.00 40.18 4.57
3947 6719 4.556233 TCACCTCATCTTAACACACTTCG 58.444 43.478 0.00 0.00 0.00 3.79
3970 6742 9.667107 TTCGGATATCCTTTTTGATATATGACC 57.333 33.333 19.61 0.00 37.91 4.02
3972 6744 9.448438 CGGATATCCTTTTTGATATATGACCAA 57.552 33.333 19.61 0.00 37.91 3.67
4029 6804 5.277442 CCATTTTGAATTGGTTGCAAGACAC 60.277 40.000 0.00 0.00 0.00 3.67
4032 6807 1.606668 GAATTGGTTGCAAGACACGGA 59.393 47.619 0.00 0.00 0.00 4.69
4035 6810 0.813610 TGGTTGCAAGACACGGACAG 60.814 55.000 0.00 0.00 0.00 3.51
4038 6813 1.400494 GTTGCAAGACACGGACAGTTT 59.600 47.619 0.00 0.00 0.00 2.66
4045 6820 1.002792 GACACGGACAGTTTTGCCTTC 60.003 52.381 0.00 0.00 0.00 3.46
4082 6858 1.026182 CGGGCACTTTGAGCTATGCA 61.026 55.000 0.00 0.00 39.92 3.96
4085 6861 1.747355 GGCACTTTGAGCTATGCACAT 59.253 47.619 0.00 0.00 39.92 3.21
4102 6878 3.115556 TGGCACGCCAAAGAACAC 58.884 55.556 8.67 0.00 44.12 3.32
4167 7048 7.359262 TCTGTATGAATGTGTTTAGGTTTCG 57.641 36.000 0.00 0.00 0.00 3.46
4234 7120 0.884704 TTGAGAAAGAGCACGGGCAC 60.885 55.000 14.57 5.35 44.61 5.01
4235 7121 1.301716 GAGAAAGAGCACGGGCACA 60.302 57.895 14.57 0.00 44.61 4.57
4259 7145 8.254508 ACACTTTGCTAACAGGTGAAAATTAAA 58.745 29.630 5.92 0.00 35.94 1.52
4260 7146 9.092876 CACTTTGCTAACAGGTGAAAATTAAAA 57.907 29.630 0.00 0.00 35.02 1.52
4261 7147 9.660180 ACTTTGCTAACAGGTGAAAATTAAAAA 57.340 25.926 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.504337 CGTGAAGGTTTTGATTGTTAACCGA 60.504 40.000 2.48 0.00 44.70 4.69
1 2 4.673311 CGTGAAGGTTTTGATTGTTAACCG 59.327 41.667 2.48 0.00 44.70 4.44
2 3 4.979815 CCGTGAAGGTTTTGATTGTTAACC 59.020 41.667 2.48 0.00 41.27 2.85
3 4 4.443063 GCCGTGAAGGTTTTGATTGTTAAC 59.557 41.667 0.00 0.00 43.70 2.01
4 5 4.612943 GCCGTGAAGGTTTTGATTGTTAA 58.387 39.130 0.00 0.00 43.70 2.01
5 6 3.304123 CGCCGTGAAGGTTTTGATTGTTA 60.304 43.478 0.00 0.00 43.70 2.41
6 7 2.542824 CGCCGTGAAGGTTTTGATTGTT 60.543 45.455 0.00 0.00 43.70 2.83
7 8 1.001815 CGCCGTGAAGGTTTTGATTGT 60.002 47.619 0.00 0.00 43.70 2.71
8 9 1.001815 ACGCCGTGAAGGTTTTGATTG 60.002 47.619 0.00 0.00 43.70 2.67
9 10 1.001815 CACGCCGTGAAGGTTTTGATT 60.002 47.619 12.85 0.00 43.70 2.57
10 11 0.591170 CACGCCGTGAAGGTTTTGAT 59.409 50.000 12.85 0.00 43.70 2.57
11 12 1.440938 CCACGCCGTGAAGGTTTTGA 61.441 55.000 20.57 0.00 43.70 2.69
12 13 1.008995 CCACGCCGTGAAGGTTTTG 60.009 57.895 20.57 0.00 43.70 2.44
13 14 1.033202 AACCACGCCGTGAAGGTTTT 61.033 50.000 20.57 0.00 41.33 2.43
14 15 1.033202 AAACCACGCCGTGAAGGTTT 61.033 50.000 20.57 17.34 46.43 3.27
15 16 1.441732 GAAACCACGCCGTGAAGGTT 61.442 55.000 20.57 11.87 45.73 3.50
16 17 1.890510 GAAACCACGCCGTGAAGGT 60.891 57.895 20.57 5.19 43.70 3.50
17 18 2.613506 GGAAACCACGCCGTGAAGG 61.614 63.158 20.57 4.42 44.97 3.46
18 19 1.890041 TGGAAACCACGCCGTGAAG 60.890 57.895 20.57 5.27 35.23 3.02
19 20 2.181521 GTGGAAACCACGCCGTGAA 61.182 57.895 20.57 0.00 44.95 3.18
20 21 2.589442 GTGGAAACCACGCCGTGA 60.589 61.111 20.57 0.00 44.95 4.35
28 29 0.400213 AGATTCAGGCGTGGAAACCA 59.600 50.000 6.56 0.00 0.00 3.67
29 30 1.087501 GAGATTCAGGCGTGGAAACC 58.912 55.000 6.56 0.00 0.00 3.27
30 31 2.100605 AGAGATTCAGGCGTGGAAAC 57.899 50.000 6.56 0.00 0.00 2.78
31 32 2.224523 ACAAGAGATTCAGGCGTGGAAA 60.225 45.455 6.56 0.00 0.00 3.13
32 33 1.347707 ACAAGAGATTCAGGCGTGGAA 59.652 47.619 6.56 0.41 0.00 3.53
33 34 0.976641 ACAAGAGATTCAGGCGTGGA 59.023 50.000 6.56 0.00 0.00 4.02
34 35 1.813513 AACAAGAGATTCAGGCGTGG 58.186 50.000 6.56 0.00 0.00 4.94
35 36 2.349886 GCTAACAAGAGATTCAGGCGTG 59.650 50.000 0.00 0.00 0.00 5.34
36 37 2.622436 GCTAACAAGAGATTCAGGCGT 58.378 47.619 0.00 0.00 0.00 5.68
37 38 1.590238 CGCTAACAAGAGATTCAGGCG 59.410 52.381 0.00 0.00 0.00 5.52
38 39 1.936547 CCGCTAACAAGAGATTCAGGC 59.063 52.381 0.00 0.00 0.00 4.85
39 40 3.190874 GTCCGCTAACAAGAGATTCAGG 58.809 50.000 0.00 0.00 0.00 3.86
40 41 3.190874 GGTCCGCTAACAAGAGATTCAG 58.809 50.000 0.00 0.00 0.00 3.02
41 42 2.416836 CGGTCCGCTAACAAGAGATTCA 60.417 50.000 0.00 0.00 0.00 2.57
42 43 2.194271 CGGTCCGCTAACAAGAGATTC 58.806 52.381 0.00 0.00 0.00 2.52
43 44 2.295253 CGGTCCGCTAACAAGAGATT 57.705 50.000 0.00 0.00 0.00 2.40
57 58 3.083997 ATGGAGGAGGTGCGGTCC 61.084 66.667 0.00 0.00 0.00 4.46
58 59 2.501610 GATGGAGGAGGTGCGGTC 59.498 66.667 0.00 0.00 0.00 4.79
59 60 3.461773 CGATGGAGGAGGTGCGGT 61.462 66.667 0.00 0.00 0.00 5.68
60 61 3.144120 CTCGATGGAGGAGGTGCGG 62.144 68.421 0.00 0.00 36.61 5.69
61 62 2.069465 CTCTCGATGGAGGAGGTGCG 62.069 65.000 4.78 0.00 40.85 5.34
62 63 1.040339 ACTCTCGATGGAGGAGGTGC 61.040 60.000 4.78 0.00 40.85 5.01
63 64 1.135915 CAACTCTCGATGGAGGAGGTG 59.864 57.143 4.78 2.66 40.85 4.00
64 65 1.006043 TCAACTCTCGATGGAGGAGGT 59.994 52.381 4.78 0.00 40.85 3.85
65 66 1.680735 CTCAACTCTCGATGGAGGAGG 59.319 57.143 4.78 0.00 40.85 4.30
66 67 1.680735 CCTCAACTCTCGATGGAGGAG 59.319 57.143 2.14 0.00 46.38 3.69
67 68 1.769026 CCTCAACTCTCGATGGAGGA 58.231 55.000 2.14 0.00 46.38 3.71
68 69 0.103937 GCCTCAACTCTCGATGGAGG 59.896 60.000 4.78 3.84 46.24 4.30
69 70 0.248825 CGCCTCAACTCTCGATGGAG 60.249 60.000 0.00 0.00 41.89 3.86
70 71 0.965866 ACGCCTCAACTCTCGATGGA 60.966 55.000 0.00 0.00 0.00 3.41
71 72 0.803768 CACGCCTCAACTCTCGATGG 60.804 60.000 0.00 0.00 0.00 3.51
72 73 0.171231 TCACGCCTCAACTCTCGATG 59.829 55.000 0.00 0.00 0.00 3.84
73 74 1.107114 ATCACGCCTCAACTCTCGAT 58.893 50.000 0.00 0.00 0.00 3.59
74 75 1.746470 TATCACGCCTCAACTCTCGA 58.254 50.000 0.00 0.00 0.00 4.04
75 76 2.455032 CTTATCACGCCTCAACTCTCG 58.545 52.381 0.00 0.00 0.00 4.04
76 77 2.197577 GCTTATCACGCCTCAACTCTC 58.802 52.381 0.00 0.00 0.00 3.20
77 78 1.550524 TGCTTATCACGCCTCAACTCT 59.449 47.619 0.00 0.00 0.00 3.24
78 79 1.929836 CTGCTTATCACGCCTCAACTC 59.070 52.381 0.00 0.00 0.00 3.01
79 80 1.406069 CCTGCTTATCACGCCTCAACT 60.406 52.381 0.00 0.00 0.00 3.16
80 81 1.009829 CCTGCTTATCACGCCTCAAC 58.990 55.000 0.00 0.00 0.00 3.18
81 82 0.901827 TCCTGCTTATCACGCCTCAA 59.098 50.000 0.00 0.00 0.00 3.02
82 83 0.461548 CTCCTGCTTATCACGCCTCA 59.538 55.000 0.00 0.00 0.00 3.86
83 84 0.461961 ACTCCTGCTTATCACGCCTC 59.538 55.000 0.00 0.00 0.00 4.70
84 85 0.905357 AACTCCTGCTTATCACGCCT 59.095 50.000 0.00 0.00 0.00 5.52
85 86 2.596904 TAACTCCTGCTTATCACGCC 57.403 50.000 0.00 0.00 0.00 5.68
86 87 3.522553 AGTTAACTCCTGCTTATCACGC 58.477 45.455 1.12 0.00 0.00 5.34
99 100 1.470112 GCAGAGCTCGGGAGTTAACTC 60.470 57.143 24.73 24.73 42.14 3.01
100 101 0.533032 GCAGAGCTCGGGAGTTAACT 59.467 55.000 15.89 8.13 0.00 2.24
101 102 0.533032 AGCAGAGCTCGGGAGTTAAC 59.467 55.000 15.89 0.00 30.62 2.01
102 103 0.818296 GAGCAGAGCTCGGGAGTTAA 59.182 55.000 15.89 0.00 45.85 2.01
103 104 2.494677 GAGCAGAGCTCGGGAGTTA 58.505 57.895 15.89 0.00 45.85 2.24
104 105 3.293702 GAGCAGAGCTCGGGAGTT 58.706 61.111 15.89 1.99 45.85 3.01
112 113 1.194218 GGGAGAAAGAGAGCAGAGCT 58.806 55.000 0.00 0.00 43.88 4.09
113 114 0.901124 TGGGAGAAAGAGAGCAGAGC 59.099 55.000 0.00 0.00 0.00 4.09
114 115 2.178580 AGTGGGAGAAAGAGAGCAGAG 58.821 52.381 0.00 0.00 0.00 3.35
115 116 2.317371 AGTGGGAGAAAGAGAGCAGA 57.683 50.000 0.00 0.00 0.00 4.26
116 117 2.673610 CGAAGTGGGAGAAAGAGAGCAG 60.674 54.545 0.00 0.00 0.00 4.24
117 118 1.273606 CGAAGTGGGAGAAAGAGAGCA 59.726 52.381 0.00 0.00 0.00 4.26
118 119 1.404851 CCGAAGTGGGAGAAAGAGAGC 60.405 57.143 0.00 0.00 0.00 4.09
119 120 1.404851 GCCGAAGTGGGAGAAAGAGAG 60.405 57.143 0.00 0.00 38.63 3.20
120 121 0.608640 GCCGAAGTGGGAGAAAGAGA 59.391 55.000 0.00 0.00 38.63 3.10
121 122 0.391793 GGCCGAAGTGGGAGAAAGAG 60.392 60.000 0.00 0.00 38.63 2.85
122 123 1.125093 TGGCCGAAGTGGGAGAAAGA 61.125 55.000 0.00 0.00 38.63 2.52
123 124 0.250727 TTGGCCGAAGTGGGAGAAAG 60.251 55.000 0.00 0.00 38.63 2.62
124 125 0.183971 TTTGGCCGAAGTGGGAGAAA 59.816 50.000 0.00 0.00 38.63 2.52
125 126 0.250727 CTTTGGCCGAAGTGGGAGAA 60.251 55.000 23.00 0.00 38.63 2.87
126 127 1.374947 CTTTGGCCGAAGTGGGAGA 59.625 57.895 23.00 0.00 38.63 3.71
127 128 1.675641 CCTTTGGCCGAAGTGGGAG 60.676 63.158 27.71 11.12 38.63 4.30
128 129 2.406002 GACCTTTGGCCGAAGTGGGA 62.406 60.000 27.71 0.00 38.63 4.37
129 130 1.971695 GACCTTTGGCCGAAGTGGG 60.972 63.158 27.71 17.95 38.63 4.61
130 131 0.955919 GAGACCTTTGGCCGAAGTGG 60.956 60.000 27.71 18.62 42.50 4.00
131 132 0.035458 AGAGACCTTTGGCCGAAGTG 59.965 55.000 27.71 21.30 0.00 3.16
132 133 0.035458 CAGAGACCTTTGGCCGAAGT 59.965 55.000 27.71 17.35 0.00 3.01
133 134 0.035458 ACAGAGACCTTTGGCCGAAG 59.965 55.000 24.15 24.15 0.00 3.79
134 135 1.344065 TACAGAGACCTTTGGCCGAA 58.656 50.000 5.01 5.01 0.00 4.30
135 136 1.207089 CATACAGAGACCTTTGGCCGA 59.793 52.381 0.00 0.00 0.00 5.54
136 137 1.656652 CATACAGAGACCTTTGGCCG 58.343 55.000 0.00 0.00 0.00 6.13
137 138 1.559682 TCCATACAGAGACCTTTGGCC 59.440 52.381 0.00 0.00 0.00 5.36
138 139 3.055094 TCTTCCATACAGAGACCTTTGGC 60.055 47.826 0.00 0.00 0.00 4.52
139 140 4.826274 TCTTCCATACAGAGACCTTTGG 57.174 45.455 0.00 0.00 0.00 3.28
140 141 5.814705 GTCATCTTCCATACAGAGACCTTTG 59.185 44.000 0.00 0.00 0.00 2.77
141 142 5.104735 GGTCATCTTCCATACAGAGACCTTT 60.105 44.000 0.00 0.00 36.56 3.11
142 143 4.407296 GGTCATCTTCCATACAGAGACCTT 59.593 45.833 0.00 0.00 36.56 3.50
143 144 3.964031 GGTCATCTTCCATACAGAGACCT 59.036 47.826 0.00 0.00 36.56 3.85
144 145 3.706594 TGGTCATCTTCCATACAGAGACC 59.293 47.826 0.00 0.00 38.16 3.85
145 146 5.344743 TTGGTCATCTTCCATACAGAGAC 57.655 43.478 0.00 0.00 34.75 3.36
146 147 5.163269 CCATTGGTCATCTTCCATACAGAGA 60.163 44.000 0.00 0.00 34.75 3.10
147 148 5.061853 CCATTGGTCATCTTCCATACAGAG 58.938 45.833 0.00 0.00 34.75 3.35
148 149 4.686944 GCCATTGGTCATCTTCCATACAGA 60.687 45.833 4.26 0.00 34.75 3.41
149 150 3.567164 GCCATTGGTCATCTTCCATACAG 59.433 47.826 4.26 0.00 34.75 2.74
150 151 3.202818 AGCCATTGGTCATCTTCCATACA 59.797 43.478 4.26 0.00 34.75 2.29
151 152 3.567164 CAGCCATTGGTCATCTTCCATAC 59.433 47.826 4.26 0.00 34.75 2.39
152 153 3.459227 TCAGCCATTGGTCATCTTCCATA 59.541 43.478 4.26 0.00 34.75 2.74
153 154 2.242965 TCAGCCATTGGTCATCTTCCAT 59.757 45.455 4.26 0.00 34.75 3.41
154 155 1.634973 TCAGCCATTGGTCATCTTCCA 59.365 47.619 4.26 0.00 0.00 3.53
155 156 2.425143 TCAGCCATTGGTCATCTTCC 57.575 50.000 4.26 0.00 0.00 3.46
156 157 4.996788 AATTCAGCCATTGGTCATCTTC 57.003 40.909 4.26 0.00 0.00 2.87
157 158 4.646492 GGTAATTCAGCCATTGGTCATCTT 59.354 41.667 4.26 0.00 0.00 2.40
158 159 4.210331 GGTAATTCAGCCATTGGTCATCT 58.790 43.478 4.26 0.00 0.00 2.90
159 160 3.953612 TGGTAATTCAGCCATTGGTCATC 59.046 43.478 4.26 0.00 0.00 2.92
160 161 3.956199 CTGGTAATTCAGCCATTGGTCAT 59.044 43.478 4.26 0.00 33.84 3.06
161 162 3.355378 CTGGTAATTCAGCCATTGGTCA 58.645 45.455 4.26 0.00 33.84 4.02
171 172 6.204301 CAGTCATCCATTAGCTGGTAATTCAG 59.796 42.308 9.26 2.82 46.08 3.02
172 173 6.057533 CAGTCATCCATTAGCTGGTAATTCA 58.942 40.000 9.26 0.37 46.08 2.57
173 174 6.291377 TCAGTCATCCATTAGCTGGTAATTC 58.709 40.000 9.26 0.00 46.08 2.17
174 175 6.100279 TCTCAGTCATCCATTAGCTGGTAATT 59.900 38.462 9.26 0.00 46.08 1.40
175 176 5.604231 TCTCAGTCATCCATTAGCTGGTAAT 59.396 40.000 6.30 6.30 46.08 1.89
176 177 4.962362 TCTCAGTCATCCATTAGCTGGTAA 59.038 41.667 0.00 1.35 46.08 2.85
177 178 4.546674 TCTCAGTCATCCATTAGCTGGTA 58.453 43.478 0.00 0.00 46.08 3.25
178 179 3.378512 TCTCAGTCATCCATTAGCTGGT 58.621 45.455 0.00 0.00 46.08 4.00
180 181 3.808726 GCTTCTCAGTCATCCATTAGCTG 59.191 47.826 0.00 0.00 0.00 4.24
181 182 3.181456 GGCTTCTCAGTCATCCATTAGCT 60.181 47.826 0.00 0.00 0.00 3.32
182 183 3.137533 GGCTTCTCAGTCATCCATTAGC 58.862 50.000 0.00 0.00 0.00 3.09
183 184 3.388308 CGGCTTCTCAGTCATCCATTAG 58.612 50.000 0.00 0.00 0.00 1.73
184 185 2.103094 CCGGCTTCTCAGTCATCCATTA 59.897 50.000 0.00 0.00 0.00 1.90
185 186 1.134280 CCGGCTTCTCAGTCATCCATT 60.134 52.381 0.00 0.00 0.00 3.16
186 187 0.467384 CCGGCTTCTCAGTCATCCAT 59.533 55.000 0.00 0.00 0.00 3.41
187 188 0.904865 ACCGGCTTCTCAGTCATCCA 60.905 55.000 0.00 0.00 0.00 3.41
188 189 0.250513 AACCGGCTTCTCAGTCATCC 59.749 55.000 0.00 0.00 0.00 3.51
189 190 2.166664 ACTAACCGGCTTCTCAGTCATC 59.833 50.000 0.00 0.00 0.00 2.92
190 191 2.166664 GACTAACCGGCTTCTCAGTCAT 59.833 50.000 0.00 0.00 34.06 3.06
191 192 1.544691 GACTAACCGGCTTCTCAGTCA 59.455 52.381 0.00 0.00 34.06 3.41
192 193 1.544691 TGACTAACCGGCTTCTCAGTC 59.455 52.381 0.00 6.07 34.39 3.51
193 194 1.546476 CTGACTAACCGGCTTCTCAGT 59.454 52.381 0.00 0.00 0.00 3.41
194 195 1.134965 CCTGACTAACCGGCTTCTCAG 60.135 57.143 0.00 7.10 0.00 3.35
195 196 0.895530 CCTGACTAACCGGCTTCTCA 59.104 55.000 0.00 0.00 0.00 3.27
196 197 1.135333 CTCCTGACTAACCGGCTTCTC 59.865 57.143 0.00 0.00 0.00 2.87
197 198 1.187087 CTCCTGACTAACCGGCTTCT 58.813 55.000 0.00 0.00 0.00 2.85
198 199 0.175989 CCTCCTGACTAACCGGCTTC 59.824 60.000 0.00 0.00 0.00 3.86
199 200 0.252103 TCCTCCTGACTAACCGGCTT 60.252 55.000 0.00 0.00 0.00 4.35
200 201 0.684805 CTCCTCCTGACTAACCGGCT 60.685 60.000 0.00 0.00 0.00 5.52
201 202 1.817209 CTCCTCCTGACTAACCGGC 59.183 63.158 0.00 0.00 0.00 6.13
202 203 1.677637 GGCTCCTCCTGACTAACCGG 61.678 65.000 0.00 0.00 0.00 5.28
203 204 1.817209 GGCTCCTCCTGACTAACCG 59.183 63.158 0.00 0.00 0.00 4.44
204 205 1.677637 CCGGCTCCTCCTGACTAACC 61.678 65.000 0.00 0.00 0.00 2.85
205 206 0.683504 TCCGGCTCCTCCTGACTAAC 60.684 60.000 0.00 0.00 0.00 2.34
206 207 0.395862 CTCCGGCTCCTCCTGACTAA 60.396 60.000 0.00 0.00 0.00 2.24
207 208 1.227664 CTCCGGCTCCTCCTGACTA 59.772 63.158 0.00 0.00 0.00 2.59
208 209 2.043450 CTCCGGCTCCTCCTGACT 60.043 66.667 0.00 0.00 0.00 3.41
209 210 2.043852 TCTCCGGCTCCTCCTGAC 60.044 66.667 0.00 0.00 0.00 3.51
210 211 2.043852 GTCTCCGGCTCCTCCTGA 60.044 66.667 0.00 0.00 0.00 3.86
211 212 2.043450 AGTCTCCGGCTCCTCCTG 60.043 66.667 0.00 0.00 0.00 3.86
212 213 2.043450 CAGTCTCCGGCTCCTCCT 60.043 66.667 0.00 0.00 0.00 3.69
213 214 3.151022 CCAGTCTCCGGCTCCTCC 61.151 72.222 0.00 0.00 0.00 4.30
214 215 2.937959 ATCCCAGTCTCCGGCTCCTC 62.938 65.000 0.00 0.00 0.00 3.71
215 216 2.937959 GATCCCAGTCTCCGGCTCCT 62.938 65.000 0.00 0.00 0.00 3.69
216 217 2.444895 ATCCCAGTCTCCGGCTCC 60.445 66.667 0.00 0.00 0.00 4.70
217 218 1.045911 AAGATCCCAGTCTCCGGCTC 61.046 60.000 0.00 0.00 0.00 4.70
218 219 0.261991 TAAGATCCCAGTCTCCGGCT 59.738 55.000 0.00 0.00 0.00 5.52
219 220 1.120530 TTAAGATCCCAGTCTCCGGC 58.879 55.000 0.00 0.00 0.00 6.13
220 221 3.532542 GTTTTAAGATCCCAGTCTCCGG 58.467 50.000 0.00 0.00 0.00 5.14
221 222 3.055385 TGGTTTTAAGATCCCAGTCTCCG 60.055 47.826 0.00 0.00 0.00 4.63
222 223 4.569719 TGGTTTTAAGATCCCAGTCTCC 57.430 45.455 0.00 0.00 0.00 3.71
223 224 5.561679 AGTTGGTTTTAAGATCCCAGTCTC 58.438 41.667 0.00 0.00 0.00 3.36
224 225 5.561679 GAGTTGGTTTTAAGATCCCAGTCT 58.438 41.667 0.00 0.00 0.00 3.24
225 226 4.392138 CGAGTTGGTTTTAAGATCCCAGTC 59.608 45.833 0.00 0.00 0.00 3.51
226 227 4.324267 CGAGTTGGTTTTAAGATCCCAGT 58.676 43.478 0.00 0.00 0.00 4.00
227 228 3.689649 CCGAGTTGGTTTTAAGATCCCAG 59.310 47.826 0.00 0.00 0.00 4.45
228 229 3.681593 CCGAGTTGGTTTTAAGATCCCA 58.318 45.455 0.00 0.00 0.00 4.37
229 230 2.422479 GCCGAGTTGGTTTTAAGATCCC 59.578 50.000 0.00 0.00 41.21 3.85
230 231 3.127030 CAGCCGAGTTGGTTTTAAGATCC 59.873 47.826 0.00 0.00 41.21 3.36
231 232 3.426292 GCAGCCGAGTTGGTTTTAAGATC 60.426 47.826 0.00 0.00 41.21 2.75
232 233 2.488153 GCAGCCGAGTTGGTTTTAAGAT 59.512 45.455 0.00 0.00 41.21 2.40
233 234 1.877443 GCAGCCGAGTTGGTTTTAAGA 59.123 47.619 0.00 0.00 41.21 2.10
234 235 1.880027 AGCAGCCGAGTTGGTTTTAAG 59.120 47.619 0.00 0.00 41.21 1.85
235 236 1.877443 GAGCAGCCGAGTTGGTTTTAA 59.123 47.619 0.00 0.00 41.21 1.52
236 237 1.202710 TGAGCAGCCGAGTTGGTTTTA 60.203 47.619 0.00 0.00 41.21 1.52
237 238 0.465460 TGAGCAGCCGAGTTGGTTTT 60.465 50.000 0.00 0.00 41.21 2.43
238 239 0.250901 ATGAGCAGCCGAGTTGGTTT 60.251 50.000 0.00 0.00 41.21 3.27
239 240 0.613260 TATGAGCAGCCGAGTTGGTT 59.387 50.000 0.00 0.00 41.21 3.67
240 241 0.108138 GTATGAGCAGCCGAGTTGGT 60.108 55.000 0.00 0.00 41.21 3.67
241 242 0.176680 AGTATGAGCAGCCGAGTTGG 59.823 55.000 0.00 0.00 42.50 3.77
242 243 1.565305 GAGTATGAGCAGCCGAGTTG 58.435 55.000 0.00 0.00 0.00 3.16
243 244 0.101399 CGAGTATGAGCAGCCGAGTT 59.899 55.000 0.00 0.00 0.00 3.01
244 245 0.748367 TCGAGTATGAGCAGCCGAGT 60.748 55.000 0.00 0.00 0.00 4.18
245 246 0.382158 TTCGAGTATGAGCAGCCGAG 59.618 55.000 0.00 0.00 0.00 4.63
246 247 0.100682 GTTCGAGTATGAGCAGCCGA 59.899 55.000 0.00 0.00 0.00 5.54
247 248 0.101399 AGTTCGAGTATGAGCAGCCG 59.899 55.000 0.00 0.00 0.00 5.52
248 249 1.846541 GAGTTCGAGTATGAGCAGCC 58.153 55.000 0.00 0.00 0.00 4.85
249 250 1.471964 CGAGTTCGAGTATGAGCAGC 58.528 55.000 0.00 0.00 43.02 5.25
250 251 1.862008 GCCGAGTTCGAGTATGAGCAG 60.862 57.143 2.59 0.00 43.02 4.24
251 252 0.100682 GCCGAGTTCGAGTATGAGCA 59.899 55.000 2.59 0.00 43.02 4.26
252 253 0.382515 AGCCGAGTTCGAGTATGAGC 59.617 55.000 2.59 0.00 43.02 4.26
253 254 1.268794 CCAGCCGAGTTCGAGTATGAG 60.269 57.143 2.59 0.00 43.02 2.90
254 255 0.738975 CCAGCCGAGTTCGAGTATGA 59.261 55.000 2.59 0.00 43.02 2.15
255 256 0.456221 ACCAGCCGAGTTCGAGTATG 59.544 55.000 2.59 0.00 43.02 2.39
256 257 0.456221 CACCAGCCGAGTTCGAGTAT 59.544 55.000 2.59 0.00 43.02 2.12
257 258 0.892358 ACACCAGCCGAGTTCGAGTA 60.892 55.000 2.59 0.00 43.02 2.59
258 259 2.143594 GACACCAGCCGAGTTCGAGT 62.144 60.000 2.59 0.00 43.02 4.18
259 260 1.444553 GACACCAGCCGAGTTCGAG 60.445 63.158 2.59 0.00 43.02 4.04
260 261 1.740332 TTGACACCAGCCGAGTTCGA 61.740 55.000 2.59 0.00 43.02 3.71
261 262 1.300620 TTGACACCAGCCGAGTTCG 60.301 57.895 0.00 0.00 39.44 3.95
262 263 1.557443 CGTTGACACCAGCCGAGTTC 61.557 60.000 0.00 0.00 0.00 3.01
263 264 1.594293 CGTTGACACCAGCCGAGTT 60.594 57.895 0.00 0.00 0.00 3.01
264 265 2.029073 CGTTGACACCAGCCGAGT 59.971 61.111 0.00 0.00 0.00 4.18
265 266 2.022129 GTCGTTGACACCAGCCGAG 61.022 63.158 0.00 0.00 31.36 4.63
266 267 2.028484 GTCGTTGACACCAGCCGA 59.972 61.111 0.00 0.00 32.09 5.54
267 268 3.041940 GGTCGTTGACACCAGCCG 61.042 66.667 0.00 0.00 33.68 5.52
268 269 2.110213 TGGTCGTTGACACCAGCC 59.890 61.111 0.00 0.00 39.11 4.85
272 273 1.156736 CCAAGATGGTCGTTGACACC 58.843 55.000 0.00 0.00 33.68 4.16
273 274 1.156736 CCCAAGATGGTCGTTGACAC 58.843 55.000 0.00 0.00 35.17 3.67
274 275 0.036164 CCCCAAGATGGTCGTTGACA 59.964 55.000 0.00 0.00 35.17 3.58
275 276 1.305930 GCCCCAAGATGGTCGTTGAC 61.306 60.000 0.00 0.00 35.17 3.18
276 277 1.002624 GCCCCAAGATGGTCGTTGA 60.003 57.895 0.00 0.00 35.17 3.18
277 278 2.398554 CGCCCCAAGATGGTCGTTG 61.399 63.158 0.00 0.00 35.17 4.10
278 279 2.046314 CGCCCCAAGATGGTCGTT 60.046 61.111 0.00 0.00 35.17 3.85
279 280 4.096003 CCGCCCCAAGATGGTCGT 62.096 66.667 0.00 0.00 35.17 4.34
302 303 3.414700 CCTCAGTTGTCACCGCGC 61.415 66.667 0.00 0.00 0.00 6.86
303 304 1.300620 TTCCTCAGTTGTCACCGCG 60.301 57.895 0.00 0.00 0.00 6.46
316 317 1.149148 GACACTTCCAAGCGTTCCTC 58.851 55.000 0.00 0.00 0.00 3.71
317 318 0.600255 CGACACTTCCAAGCGTTCCT 60.600 55.000 0.00 0.00 0.00 3.36
321 322 1.827399 ATCCCGACACTTCCAAGCGT 61.827 55.000 0.00 0.00 0.00 5.07
324 325 0.392998 CCCATCCCGACACTTCCAAG 60.393 60.000 0.00 0.00 0.00 3.61
334 335 3.087253 ATTGTCGCCCCATCCCGA 61.087 61.111 0.00 0.00 0.00 5.14
347 348 2.434884 CCGAGCTCGCCACATTGT 60.435 61.111 30.49 0.00 38.18 2.71
350 351 4.827087 CTGCCGAGCTCGCCACAT 62.827 66.667 30.49 0.00 38.18 3.21
358 359 2.129555 ATTGTGAACCCTGCCGAGCT 62.130 55.000 0.00 0.00 0.00 4.09
380 381 1.815212 CTCGGCATCATTCGACGCAG 61.815 60.000 0.00 0.00 29.95 5.18
388 389 1.061905 TCCCATCCCTCGGCATCATT 61.062 55.000 0.00 0.00 0.00 2.57
390 391 0.178906 TATCCCATCCCTCGGCATCA 60.179 55.000 0.00 0.00 0.00 3.07
393 394 1.127567 CCTTATCCCATCCCTCGGCA 61.128 60.000 0.00 0.00 0.00 5.69
454 456 3.704231 CTGCCCCATCCCACCTTCG 62.704 68.421 0.00 0.00 0.00 3.79
476 478 2.793232 GCTTAATCACCGTCGTATGGAC 59.207 50.000 0.00 0.00 42.48 4.02
477 479 2.691526 AGCTTAATCACCGTCGTATGGA 59.308 45.455 0.00 0.00 0.00 3.41
478 480 3.093717 AGCTTAATCACCGTCGTATGG 57.906 47.619 0.00 0.00 0.00 2.74
479 481 3.245284 CCAAGCTTAATCACCGTCGTATG 59.755 47.826 0.00 0.00 0.00 2.39
480 482 3.454375 CCAAGCTTAATCACCGTCGTAT 58.546 45.455 0.00 0.00 0.00 3.06
481 483 2.883574 CCAAGCTTAATCACCGTCGTA 58.116 47.619 0.00 0.00 0.00 3.43
482 484 1.722011 CCAAGCTTAATCACCGTCGT 58.278 50.000 0.00 0.00 0.00 4.34
483 485 0.373716 GCCAAGCTTAATCACCGTCG 59.626 55.000 0.00 0.00 0.00 5.12
526 529 1.255667 TAGGTCCTCCTGAACACGCC 61.256 60.000 0.00 0.00 44.81 5.68
534 537 6.058183 CCAGAACAATATTTAGGTCCTCCTG 58.942 44.000 0.00 0.00 44.81 3.86
670 970 7.918076 ACTCCAAAACCTATGTGAAATCTCTA 58.082 34.615 0.00 0.00 0.00 2.43
671 971 6.784031 ACTCCAAAACCTATGTGAAATCTCT 58.216 36.000 0.00 0.00 0.00 3.10
672 972 6.881602 AGACTCCAAAACCTATGTGAAATCTC 59.118 38.462 0.00 0.00 0.00 2.75
673 973 6.656693 CAGACTCCAAAACCTATGTGAAATCT 59.343 38.462 0.00 0.00 0.00 2.40
674 974 6.623767 GCAGACTCCAAAACCTATGTGAAATC 60.624 42.308 0.00 0.00 0.00 2.17
675 975 5.183904 GCAGACTCCAAAACCTATGTGAAAT 59.816 40.000 0.00 0.00 0.00 2.17
676 976 4.518970 GCAGACTCCAAAACCTATGTGAAA 59.481 41.667 0.00 0.00 0.00 2.69
677 977 4.072131 GCAGACTCCAAAACCTATGTGAA 58.928 43.478 0.00 0.00 0.00 3.18
678 978 3.327757 AGCAGACTCCAAAACCTATGTGA 59.672 43.478 0.00 0.00 0.00 3.58
679 979 3.679389 AGCAGACTCCAAAACCTATGTG 58.321 45.455 0.00 0.00 0.00 3.21
680 980 5.700402 ATAGCAGACTCCAAAACCTATGT 57.300 39.130 0.00 0.00 0.00 2.29
681 981 5.297776 CCAATAGCAGACTCCAAAACCTATG 59.702 44.000 0.00 0.00 0.00 2.23
682 982 5.191722 TCCAATAGCAGACTCCAAAACCTAT 59.808 40.000 0.00 0.00 0.00 2.57
683 983 4.534500 TCCAATAGCAGACTCCAAAACCTA 59.466 41.667 0.00 0.00 0.00 3.08
684 984 3.330701 TCCAATAGCAGACTCCAAAACCT 59.669 43.478 0.00 0.00 0.00 3.50
685 985 3.686016 TCCAATAGCAGACTCCAAAACC 58.314 45.455 0.00 0.00 0.00 3.27
686 986 4.579869 TCTCCAATAGCAGACTCCAAAAC 58.420 43.478 0.00 0.00 0.00 2.43
687 987 4.908601 TCTCCAATAGCAGACTCCAAAA 57.091 40.909 0.00 0.00 0.00 2.44
688 988 4.774124 CATCTCCAATAGCAGACTCCAAA 58.226 43.478 0.00 0.00 0.00 3.28
689 989 3.432749 GCATCTCCAATAGCAGACTCCAA 60.433 47.826 0.00 0.00 0.00 3.53
690 990 2.103771 GCATCTCCAATAGCAGACTCCA 59.896 50.000 0.00 0.00 0.00 3.86
691 991 2.368221 AGCATCTCCAATAGCAGACTCC 59.632 50.000 0.00 0.00 0.00 3.85
692 992 3.652274 GAGCATCTCCAATAGCAGACTC 58.348 50.000 0.00 0.00 0.00 3.36
693 993 3.749665 GAGCATCTCCAATAGCAGACT 57.250 47.619 0.00 0.00 0.00 3.24
716 1016 3.552384 TTGACCCCGTCGTGCCTT 61.552 61.111 0.00 0.00 34.95 4.35
728 1537 1.997606 CACCCGATAAACTCGTTGACC 59.002 52.381 0.00 0.00 46.18 4.02
767 1577 2.996621 GAGGGATTGAAGTCACGTTCAG 59.003 50.000 0.00 0.00 37.72 3.02
814 1625 4.514585 TTGGGTTGGTGCCGTGCT 62.515 61.111 0.00 0.00 0.00 4.40
1026 1856 1.226717 GATCTCGACGAGGGTGTGC 60.227 63.158 23.92 4.72 0.00 4.57
1273 2104 4.727235 AAAAACAATCTTCGAGGACGTC 57.273 40.909 7.13 7.13 40.69 4.34
1281 2112 7.007995 GGCGAAAATAGGTAAAAACAATCTTCG 59.992 37.037 0.00 0.00 35.22 3.79
1284 2115 7.088272 GTGGCGAAAATAGGTAAAAACAATCT 58.912 34.615 0.00 0.00 0.00 2.40
1292 2123 3.064271 GCATCGTGGCGAAAATAGGTAAA 59.936 43.478 0.00 0.00 39.99 2.01
1314 2145 7.755591 AGTGTCTGTAACAATTAATCATGCAG 58.244 34.615 0.00 0.00 40.31 4.41
1365 2196 8.659925 ATGTTATGAAGAATCTAGTGAAGCTG 57.340 34.615 0.00 0.00 0.00 4.24
1416 2251 9.967346 TGATCAACTTTAGAGAAATATCTACGG 57.033 33.333 0.00 0.00 35.54 4.02
1448 2293 8.387813 TGGGTTTGTCCTAAGTCAAACTTATAT 58.612 33.333 16.44 0.00 45.51 0.86
1473 2318 5.231991 CCGTTCCAAAATGTTTGAAGTTCTG 59.768 40.000 4.17 0.00 0.00 3.02
1641 2492 5.829924 ACCATCTTTAATAACATGGAGCAGG 59.170 40.000 14.15 0.00 38.52 4.85
1675 2527 8.089115 AGCTCTTGTCACACTTAAACTTAATC 57.911 34.615 0.00 0.00 0.00 1.75
1748 2601 8.352201 GTCACTGCAGCATAATTAATCCATAAA 58.648 33.333 15.27 0.00 0.00 1.40
1758 2611 6.704289 ATAACATGTCACTGCAGCATAATT 57.296 33.333 15.27 9.54 0.00 1.40
1792 2645 3.126343 GTCGGCATGAAGAACCGTTTAAT 59.874 43.478 8.30 0.00 46.92 1.40
1793 2646 2.481185 GTCGGCATGAAGAACCGTTTAA 59.519 45.455 8.30 0.00 46.92 1.52
1794 2647 2.070783 GTCGGCATGAAGAACCGTTTA 58.929 47.619 8.30 0.00 46.92 2.01
1795 2648 0.872388 GTCGGCATGAAGAACCGTTT 59.128 50.000 8.30 0.00 46.92 3.60
1796 2649 0.034896 AGTCGGCATGAAGAACCGTT 59.965 50.000 8.30 0.00 46.92 4.44
1799 2652 1.079503 GTCAGTCGGCATGAAGAACC 58.920 55.000 0.00 0.00 0.00 3.62
1800 2653 1.795768 TGTCAGTCGGCATGAAGAAC 58.204 50.000 0.00 0.00 0.00 3.01
2096 2954 6.774170 CCAATATCCACCTCTGATTTGATTCA 59.226 38.462 0.00 0.00 0.00 2.57
2105 2963 6.441924 GGAATATCTCCAATATCCACCTCTGA 59.558 42.308 0.00 0.00 44.67 3.27
2336 3195 1.927895 CAGTGCCGAAGAGGATGTAC 58.072 55.000 0.00 0.00 45.00 2.90
2349 3208 3.311871 CAGTTAGATGATGAAGCAGTGCC 59.688 47.826 12.58 0.00 0.00 5.01
2481 3341 8.816144 GCAATGATTTCAGAAACAAAAGTACAA 58.184 29.630 0.00 0.00 0.00 2.41
2482 3342 8.196771 AGCAATGATTTCAGAAACAAAAGTACA 58.803 29.630 0.00 0.00 0.00 2.90
2483 3343 8.579682 AGCAATGATTTCAGAAACAAAAGTAC 57.420 30.769 0.00 0.00 0.00 2.73
2484 3344 9.598517 AAAGCAATGATTTCAGAAACAAAAGTA 57.401 25.926 0.00 0.00 0.00 2.24
2485 3345 8.496707 AAAGCAATGATTTCAGAAACAAAAGT 57.503 26.923 0.00 0.00 0.00 2.66
2511 3371 5.362430 ACCCATGTGTTTGTATCACTGTTTT 59.638 36.000 0.00 0.00 36.83 2.43
2521 3381 6.732896 AATTAACCAACCCATGTGTTTGTA 57.267 33.333 0.00 0.00 0.00 2.41
2526 3386 5.005628 ACCTAATTAACCAACCCATGTGT 57.994 39.130 0.00 0.00 0.00 3.72
2538 3398 9.857957 AGCGCTAATTAGATAGACCTAATTAAC 57.142 33.333 8.99 10.14 44.42 2.01
2549 3409 9.794685 TTTCTCATGATAGCGCTAATTAGATAG 57.205 33.333 22.98 12.72 0.00 2.08
2556 3416 6.201806 GTGAACTTTCTCATGATAGCGCTAAT 59.798 38.462 22.98 8.65 0.00 1.73
2567 3427 4.520111 TCCATTGTGGTGAACTTTCTCATG 59.480 41.667 0.00 0.00 39.03 3.07
2593 3453 4.325028 TGTTTTTCTGTCAGCATGCATT 57.675 36.364 21.98 0.00 34.76 3.56
2599 3459 2.098614 TGGCTTGTTTTTCTGTCAGCA 58.901 42.857 0.00 0.00 0.00 4.41
2613 3473 6.017275 CAGCCTATCTTAGAAATTCTGGCTTG 60.017 42.308 16.56 10.39 44.78 4.01
2616 3476 5.372373 ACAGCCTATCTTAGAAATTCTGGC 58.628 41.667 5.64 8.59 38.24 4.85
2626 3486 7.777095 ACTTGAGAAACTACAGCCTATCTTAG 58.223 38.462 0.00 0.00 0.00 2.18
2640 3500 5.529060 GTCTCCATTGTGAACTTGAGAAACT 59.471 40.000 0.00 0.00 31.29 2.66
2641 3501 5.278022 GGTCTCCATTGTGAACTTGAGAAAC 60.278 44.000 0.00 0.00 31.29 2.78
2642 3502 4.821805 GGTCTCCATTGTGAACTTGAGAAA 59.178 41.667 0.00 0.00 31.29 2.52
2643 3503 4.389374 GGTCTCCATTGTGAACTTGAGAA 58.611 43.478 0.00 0.00 31.29 2.87
2644 3504 3.244561 GGGTCTCCATTGTGAACTTGAGA 60.245 47.826 0.00 0.00 0.00 3.27
2645 3505 3.077359 GGGTCTCCATTGTGAACTTGAG 58.923 50.000 0.00 0.00 0.00 3.02
2647 3507 2.816087 CTGGGTCTCCATTGTGAACTTG 59.184 50.000 0.00 0.00 43.11 3.16
2648 3508 2.443255 ACTGGGTCTCCATTGTGAACTT 59.557 45.455 0.00 0.00 43.11 2.66
2651 3511 1.545428 GCACTGGGTCTCCATTGTGAA 60.545 52.381 8.40 0.00 43.29 3.18
2652 3512 0.036732 GCACTGGGTCTCCATTGTGA 59.963 55.000 8.40 0.00 43.29 3.58
2698 3573 3.058293 ACAATGTCGCAAGTTACATGTGG 60.058 43.478 9.11 0.00 35.28 4.17
2707 3582 5.219633 GTTAATTTCCACAATGTCGCAAGT 58.780 37.500 0.00 0.00 39.48 3.16
2708 3583 5.218885 TGTTAATTTCCACAATGTCGCAAG 58.781 37.500 0.00 0.00 0.00 4.01
2724 3599 7.607607 TCATGACATAGCAGTGAGTTGTTAATT 59.392 33.333 0.00 0.00 0.00 1.40
2825 3705 0.665670 CTCTATGATGCGCTGACCGG 60.666 60.000 9.73 0.00 37.44 5.28
2826 3706 0.312102 TCTCTATGATGCGCTGACCG 59.688 55.000 9.73 0.00 40.75 4.79
2862 3742 5.068067 GTCCAAGTCTCTAAGATAGGACCAC 59.932 48.000 0.00 0.00 36.83 4.16
2888 3768 8.465273 AGGAATACTTCAAATAATGGCTAACC 57.535 34.615 0.00 0.00 0.00 2.85
2910 3790 3.835978 TCCAACCTCAATCGAAGTAAGGA 59.164 43.478 11.96 0.56 0.00 3.36
2912 3792 5.419542 TCATCCAACCTCAATCGAAGTAAG 58.580 41.667 0.00 0.00 0.00 2.34
2931 3811 7.500559 AGAACAAGGGCAGAATAAACTATCATC 59.499 37.037 0.00 0.00 0.00 2.92
2980 3955 2.688507 TGTCAGAGAAACATTCGCTCC 58.311 47.619 0.00 0.00 37.74 4.70
2983 3958 4.331168 AGCTTATGTCAGAGAAACATTCGC 59.669 41.667 0.00 0.00 38.31 4.70
3015 3990 8.746922 AAATACAAGTCAAATGTGCACTAATG 57.253 30.769 19.41 13.43 32.27 1.90
3022 3997 8.386606 TCAAACAAAAATACAAGTCAAATGTGC 58.613 29.630 0.00 0.00 32.27 4.57
3092 4068 1.078285 TCATGCTGCTCAATGCCGA 60.078 52.632 0.00 0.00 42.00 5.54
3207 4185 5.356882 ACACCGACATACAAATTTCACAG 57.643 39.130 0.00 0.00 0.00 3.66
3227 4205 7.536895 TTTCGCTTGTAAGTAAGTTGTAACA 57.463 32.000 0.00 0.00 0.00 2.41
3254 4232 7.752239 CGCAAAATAACAATCAGAAATGACTCT 59.248 33.333 0.00 0.00 0.00 3.24
3387 4365 4.084171 CGTGTGATCATGATGCCACTATTC 60.084 45.833 21.59 12.15 32.78 1.75
3419 4401 7.041372 ACGATGAGTTTGTATTTACAACTTGCT 60.041 33.333 2.71 0.68 45.01 3.91
3424 4406 7.569297 TGACACGATGAGTTTGTATTTACAAC 58.431 34.615 2.71 0.26 45.01 3.32
3614 4609 1.529438 CATACAACAAACGTGCCGAGT 59.471 47.619 0.00 0.00 0.00 4.18
3622 4617 1.136085 CACTCCGGCATACAACAAACG 60.136 52.381 0.00 0.00 0.00 3.60
3642 4637 2.206576 AGCCAAATCAGTCCAGGAAC 57.793 50.000 0.00 0.00 0.00 3.62
3644 4639 2.555227 GGAAAGCCAAATCAGTCCAGGA 60.555 50.000 0.00 0.00 0.00 3.86
3704 4717 9.350357 CTGAAGTATTTGAAATTTCATGTCAGG 57.650 33.333 21.10 8.86 37.00 3.86
3711 4724 9.630098 GAAGCATCTGAAGTATTTGAAATTTCA 57.370 29.630 16.91 16.91 34.92 2.69
3724 4737 5.475909 ACAATTCACATGAAGCATCTGAAGT 59.524 36.000 0.00 0.00 33.68 3.01
3762 4775 8.506168 AATTCGGCAAAGATTCATAAGAAGTA 57.494 30.769 0.00 0.00 37.14 2.24
3798 4811 3.959535 ATGCCGGTTTCACATTCAATT 57.040 38.095 1.90 0.00 0.00 2.32
3799 4812 3.959535 AATGCCGGTTTCACATTCAAT 57.040 38.095 1.90 0.00 27.91 2.57
3816 4829 3.009723 ACCATTCGTGCAGGAACTAATG 58.990 45.455 23.02 16.61 36.02 1.90
3817 4830 3.009723 CACCATTCGTGCAGGAACTAAT 58.990 45.455 23.02 5.60 33.15 1.73
3818 4831 2.037902 TCACCATTCGTGCAGGAACTAA 59.962 45.455 23.02 2.33 42.69 2.24
3819 4832 1.621317 TCACCATTCGTGCAGGAACTA 59.379 47.619 23.02 2.72 42.69 2.24
3820 4833 0.396435 TCACCATTCGTGCAGGAACT 59.604 50.000 23.02 10.41 42.69 3.01
3821 4834 1.453155 ATCACCATTCGTGCAGGAAC 58.547 50.000 23.02 0.00 42.69 3.62
3822 4835 3.205338 CATATCACCATTCGTGCAGGAA 58.795 45.455 22.83 22.83 42.69 3.36
3823 4836 2.485302 CCATATCACCATTCGTGCAGGA 60.485 50.000 4.68 4.68 42.69 3.86
3830 4843 2.613595 CCACACACCATATCACCATTCG 59.386 50.000 0.00 0.00 0.00 3.34
4001 6776 4.378774 TGCAACCAATTCAAAATGGACTG 58.621 39.130 3.87 2.56 39.12 3.51
4029 6804 1.318576 AAGGAAGGCAAAACTGTCCG 58.681 50.000 0.00 0.00 33.38 4.79
4032 6807 2.170397 CCCAAAAGGAAGGCAAAACTGT 59.830 45.455 0.00 0.00 38.24 3.55
4035 6810 1.765904 TCCCCAAAAGGAAGGCAAAAC 59.234 47.619 0.00 0.00 38.24 2.43
4038 6813 0.178935 CCTCCCCAAAAGGAAGGCAA 60.179 55.000 0.00 0.00 38.24 4.52
4045 6820 1.244019 CGTGCTTCCTCCCCAAAAGG 61.244 60.000 0.00 0.00 35.05 3.11
4069 6845 2.486951 GCCATGTGCATAGCTCAAAG 57.513 50.000 0.00 0.00 40.77 2.77
4082 6858 1.106351 TGTTCTTTGGCGTGCCATGT 61.106 50.000 15.40 0.00 46.64 3.21
4085 6861 2.829206 CGTGTTCTTTGGCGTGCCA 61.829 57.895 10.06 10.06 45.63 4.92
4089 6865 1.063469 CAAAGTCGTGTTCTTTGGCGT 59.937 47.619 9.61 0.00 44.33 5.68
4093 6869 2.450160 GTGCCAAAGTCGTGTTCTTTG 58.550 47.619 10.29 10.29 46.27 2.77
4102 6878 4.701956 ATATTTGAAGGTGCCAAAGTCG 57.298 40.909 0.00 0.00 37.00 4.18
4141 6917 7.957484 CGAAACCTAAACACATTCATACAGAAG 59.043 37.037 0.00 0.00 40.15 2.85
4144 6920 6.542852 CCGAAACCTAAACACATTCATACAG 58.457 40.000 0.00 0.00 0.00 2.74
4185 7066 0.824595 AAACAACGGGCCCTTACCAC 60.825 55.000 22.43 0.00 0.00 4.16
4186 7067 0.106116 AAAACAACGGGCCCTTACCA 60.106 50.000 22.43 0.00 0.00 3.25
4187 7068 1.042229 AAAAACAACGGGCCCTTACC 58.958 50.000 22.43 0.00 0.00 2.85
4234 7120 8.641499 TTTAATTTTCACCTGTTAGCAAAGTG 57.359 30.769 3.76 3.76 32.99 3.16
4235 7121 9.660180 TTTTTAATTTTCACCTGTTAGCAAAGT 57.340 25.926 0.00 0.00 0.00 2.66
4287 7190 7.669722 AGCCAGATTAATTTTCACCTCAACTAA 59.330 33.333 0.00 0.00 0.00 2.24
4288 7191 7.175104 AGCCAGATTAATTTTCACCTCAACTA 58.825 34.615 0.00 0.00 0.00 2.24
4289 7192 6.012745 AGCCAGATTAATTTTCACCTCAACT 58.987 36.000 0.00 0.00 0.00 3.16
4291 7194 6.071391 GGAAGCCAGATTAATTTTCACCTCAA 60.071 38.462 0.00 0.00 0.00 3.02
4292 7195 5.418840 GGAAGCCAGATTAATTTTCACCTCA 59.581 40.000 0.00 0.00 0.00 3.86
4323 7248 3.394719 GAAGCGAGATTAATGACCCCTC 58.605 50.000 0.00 0.00 0.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.