Multiple sequence alignment - TraesCS4D01G034500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G034500 chr4D 100.000 5070 0 0 1 5070 15773059 15767990 0.000000e+00 9363
1 TraesCS4D01G034500 chr4A 91.858 4311 197 67 671 4904 584882122 584886355 0.000000e+00 5875
2 TraesCS4D01G034500 chr4B 91.018 4019 211 64 974 4904 26827516 26823560 0.000000e+00 5284
3 TraesCS4D01G034500 chr4B 84.410 449 51 11 110 557 628997261 628997691 1.690000e-114 424
4 TraesCS4D01G034500 chr4B 86.047 301 9 8 621 902 26828243 26827957 4.960000e-75 292
5 TraesCS4D01G034500 chr7B 88.788 1213 121 9 2008 3214 239091069 239092272 0.000000e+00 1472
6 TraesCS4D01G034500 chr7B 88.902 874 66 23 1569 2432 115811353 115812205 0.000000e+00 1048
7 TraesCS4D01G034500 chr7B 92.364 550 36 4 12 558 643266986 643266440 0.000000e+00 778
8 TraesCS4D01G034500 chr6D 87.721 1189 84 24 2646 3792 450653647 450654815 0.000000e+00 1330
9 TraesCS4D01G034500 chr6D 89.676 339 14 12 4268 4595 450654815 450655143 3.650000e-111 412
10 TraesCS4D01G034500 chr6D 94.574 129 6 1 4897 5025 9063693 9063566 1.110000e-46 198
11 TraesCS4D01G034500 chr6D 90.728 151 9 4 4888 5036 400083094 400082947 4.000000e-46 196
12 TraesCS4D01G034500 chr2B 89.208 871 65 20 1572 2432 334878470 334877619 0.000000e+00 1061
13 TraesCS4D01G034500 chr2B 88.774 873 63 24 1572 2432 267912405 267911556 0.000000e+00 1037
14 TraesCS4D01G034500 chr2B 87.234 188 10 9 1572 1756 334879561 334879385 8.610000e-48 202
15 TraesCS4D01G034500 chr2B 93.333 135 8 1 4901 5034 387105735 387105601 1.110000e-46 198
16 TraesCS4D01G034500 chr2D 89.418 567 45 8 1 555 469269255 469269818 0.000000e+00 701
17 TraesCS4D01G034500 chr2D 86.256 211 21 6 247 450 45673344 45673553 6.610000e-54 222
18 TraesCS4D01G034500 chr6B 87.174 460 50 8 103 556 184895607 184895151 9.730000e-142 514
19 TraesCS4D01G034500 chr1B 81.681 464 60 14 103 565 554001495 554001934 3.730000e-96 363
20 TraesCS4D01G034500 chr1B 95.200 125 5 1 4897 5021 330233051 330232928 4.000000e-46 196
21 TraesCS4D01G034500 chr5B 83.619 409 41 11 127 512 603633551 603633956 1.340000e-95 361
22 TraesCS4D01G034500 chr3D 88.192 271 28 4 119 387 9593290 9593022 2.280000e-83 320
23 TraesCS4D01G034500 chr3D 98.291 117 2 0 4901 5017 607000654 607000538 6.650000e-49 206
24 TraesCS4D01G034500 chr3D 97.479 119 3 0 4900 5018 337959508 337959626 2.390000e-48 204
25 TraesCS4D01G034500 chr2A 85.294 204 25 3 245 443 49163507 49163710 6.650000e-49 206
26 TraesCS4D01G034500 chr1A 94.488 127 6 1 4901 5026 23099107 23098981 1.440000e-45 195
27 TraesCS4D01G034500 chr1A 92.086 139 9 2 4889 5027 266770370 266770506 1.440000e-45 195
28 TraesCS4D01G034500 chr5D 94.400 125 7 0 4901 5025 498400416 498400292 5.180000e-45 193
29 TraesCS4D01G034500 chr3A 79.137 278 39 9 122 384 60863129 60862856 1.880000e-39 174
30 TraesCS4D01G034500 chrUn 82.741 197 30 3 103 297 68474853 68474659 6.750000e-39 172
31 TraesCS4D01G034500 chr7D 80.311 193 32 3 103 295 49640695 49640881 1.900000e-29 141


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G034500 chr4D 15767990 15773059 5069 True 9363.0 9363 100.0000 1 5070 1 chr4D.!!$R1 5069
1 TraesCS4D01G034500 chr4A 584882122 584886355 4233 False 5875.0 5875 91.8580 671 4904 1 chr4A.!!$F1 4233
2 TraesCS4D01G034500 chr4B 26823560 26828243 4683 True 2788.0 5284 88.5325 621 4904 2 chr4B.!!$R1 4283
3 TraesCS4D01G034500 chr7B 239091069 239092272 1203 False 1472.0 1472 88.7880 2008 3214 1 chr7B.!!$F2 1206
4 TraesCS4D01G034500 chr7B 115811353 115812205 852 False 1048.0 1048 88.9020 1569 2432 1 chr7B.!!$F1 863
5 TraesCS4D01G034500 chr7B 643266440 643266986 546 True 778.0 778 92.3640 12 558 1 chr7B.!!$R1 546
6 TraesCS4D01G034500 chr6D 450653647 450655143 1496 False 871.0 1330 88.6985 2646 4595 2 chr6D.!!$F1 1949
7 TraesCS4D01G034500 chr2B 267911556 267912405 849 True 1037.0 1037 88.7740 1572 2432 1 chr2B.!!$R1 860
8 TraesCS4D01G034500 chr2B 334877619 334879561 1942 True 631.5 1061 88.2210 1572 2432 2 chr2B.!!$R3 860
9 TraesCS4D01G034500 chr2D 469269255 469269818 563 False 701.0 701 89.4180 1 555 1 chr2D.!!$F2 554

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
741 776 0.602905 CGGTCCCACCTGTCAAAGAC 60.603 60.0 0.00 0.00 35.66 3.01 F
1214 1629 0.034896 TGCAAGGTCCGTCTTCTTCC 59.965 55.0 0.00 0.00 0.00 3.46 F
1460 1884 0.457443 GCTGCCTGGCTGGTATTTTC 59.543 55.0 24.37 4.77 38.35 2.29 F
2393 3943 1.195347 CGACGAGCATCACATCAGTC 58.805 55.0 0.00 0.00 33.17 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2301 3850 0.907486 CACCAGCAAGAGGATCCTGA 59.093 55.000 22.02 0.00 33.66 3.86 R
2302 3851 0.907486 TCACCAGCAAGAGGATCCTG 59.093 55.000 22.02 7.11 33.66 3.86 R
2513 4063 1.395635 ACATACCACTGGCATGCATG 58.604 50.000 22.70 22.70 0.00 4.06 R
4194 5803 1.003116 GCAATGAGTTAGCATGCCGAG 60.003 52.381 15.66 0.00 0.00 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 9.683069 TTTTTAATTTTCTGCAACAGAGATCTC 57.317 29.630 15.29 15.29 41.75 2.75
67 69 2.478894 CGCAACGAAGGTCTTGTTACAT 59.521 45.455 0.00 0.00 0.00 2.29
93 95 2.795175 AAAGATCACACGACACGAGT 57.205 45.000 0.00 0.00 0.00 4.18
100 102 1.263484 CACACGACACGAGTCTGTACT 59.737 52.381 11.25 0.00 42.73 2.73
101 103 1.945394 ACACGACACGAGTCTGTACTT 59.055 47.619 11.25 0.00 42.73 2.24
248 264 7.446769 TGTAGAACTTTTGCAACAGAGGTATA 58.553 34.615 19.17 5.87 0.00 1.47
266 282 6.166982 AGGTATAGTTGCAGAAGTTGTTCTC 58.833 40.000 0.00 0.00 41.40 2.87
372 388 5.774498 ACAGGGAGAATGTTTCAAAAGAC 57.226 39.130 0.00 0.00 0.00 3.01
398 416 2.870435 GCAACGACATCTACAACAGGGT 60.870 50.000 0.00 0.00 0.00 4.34
399 417 2.993899 CAACGACATCTACAACAGGGTC 59.006 50.000 0.00 0.00 0.00 4.46
407 425 1.697082 TACAACAGGGTCGGGTTGCA 61.697 55.000 4.57 0.00 46.31 4.08
419 437 3.804873 GTCGGGTTGCAAAAATGCTTTTA 59.195 39.130 0.00 0.00 32.85 1.52
446 464 0.662619 CGTCAAGTTGCAGGAAAGCA 59.337 50.000 0.00 0.00 43.99 3.91
487 505 3.458118 TCCCGACCACCTGATCAAATAAT 59.542 43.478 0.00 0.00 0.00 1.28
517 535 2.989824 CAGGGAGGTGGTCGACGT 60.990 66.667 9.92 0.00 0.00 4.34
558 576 3.577649 TGAACACAAGCGTTTTCCAAA 57.422 38.095 0.00 0.00 31.94 3.28
559 577 3.914312 TGAACACAAGCGTTTTCCAAAA 58.086 36.364 0.00 0.00 31.94 2.44
560 578 3.675698 TGAACACAAGCGTTTTCCAAAAC 59.324 39.130 5.04 5.04 43.61 2.43
561 579 3.305398 ACACAAGCGTTTTCCAAAACA 57.695 38.095 13.86 0.00 46.52 2.83
562 580 3.654414 ACACAAGCGTTTTCCAAAACAA 58.346 36.364 13.86 0.00 46.52 2.83
563 581 4.058817 ACACAAGCGTTTTCCAAAACAAA 58.941 34.783 13.86 0.00 46.52 2.83
564 582 4.511826 ACACAAGCGTTTTCCAAAACAAAA 59.488 33.333 13.86 0.00 46.52 2.44
565 583 5.007724 ACACAAGCGTTTTCCAAAACAAAAA 59.992 32.000 13.86 0.00 46.52 1.94
566 584 5.338297 CACAAGCGTTTTCCAAAACAAAAAC 59.662 36.000 13.86 0.00 46.52 2.43
567 585 5.007724 ACAAGCGTTTTCCAAAACAAAAACA 59.992 32.000 13.86 0.00 46.52 2.83
568 586 5.024768 AGCGTTTTCCAAAACAAAAACAC 57.975 34.783 13.86 2.21 46.52 3.32
569 587 4.083749 AGCGTTTTCCAAAACAAAAACACC 60.084 37.500 13.86 2.45 46.52 4.16
570 588 4.713806 CGTTTTCCAAAACAAAAACACCC 58.286 39.130 13.86 0.00 46.52 4.61
571 589 4.213482 CGTTTTCCAAAACAAAAACACCCA 59.787 37.500 13.86 0.00 46.52 4.51
572 590 5.106515 CGTTTTCCAAAACAAAAACACCCAT 60.107 36.000 13.86 0.00 46.52 4.00
573 591 5.886960 TTTCCAAAACAAAAACACCCATG 57.113 34.783 0.00 0.00 0.00 3.66
574 592 4.826274 TCCAAAACAAAAACACCCATGA 57.174 36.364 0.00 0.00 0.00 3.07
575 593 4.508662 TCCAAAACAAAAACACCCATGAC 58.491 39.130 0.00 0.00 0.00 3.06
576 594 4.020218 TCCAAAACAAAAACACCCATGACA 60.020 37.500 0.00 0.00 0.00 3.58
577 595 4.332268 CCAAAACAAAAACACCCATGACAG 59.668 41.667 0.00 0.00 0.00 3.51
578 596 2.888834 ACAAAAACACCCATGACAGC 57.111 45.000 0.00 0.00 0.00 4.40
579 597 2.106566 ACAAAAACACCCATGACAGCA 58.893 42.857 0.00 0.00 0.00 4.41
580 598 2.699846 ACAAAAACACCCATGACAGCAT 59.300 40.909 0.00 0.00 34.29 3.79
581 599 3.134442 ACAAAAACACCCATGACAGCATT 59.866 39.130 0.00 0.00 30.68 3.56
582 600 4.128643 CAAAAACACCCATGACAGCATTT 58.871 39.130 0.00 0.00 30.68 2.32
583 601 5.163364 ACAAAAACACCCATGACAGCATTTA 60.163 36.000 0.00 0.00 30.68 1.40
584 602 4.789012 AAACACCCATGACAGCATTTAG 57.211 40.909 0.00 0.00 30.68 1.85
585 603 3.719268 ACACCCATGACAGCATTTAGA 57.281 42.857 0.00 0.00 30.68 2.10
586 604 4.240881 ACACCCATGACAGCATTTAGAT 57.759 40.909 0.00 0.00 30.68 1.98
587 605 3.949754 ACACCCATGACAGCATTTAGATG 59.050 43.478 0.00 0.00 40.19 2.90
588 606 4.201657 CACCCATGACAGCATTTAGATGA 58.798 43.478 0.00 0.00 37.02 2.92
589 607 4.641541 CACCCATGACAGCATTTAGATGAA 59.358 41.667 0.00 0.00 37.02 2.57
590 608 5.125900 CACCCATGACAGCATTTAGATGAAA 59.874 40.000 0.00 0.00 37.02 2.69
591 609 5.895534 ACCCATGACAGCATTTAGATGAAAT 59.104 36.000 0.00 0.00 38.34 2.17
592 610 6.381994 ACCCATGACAGCATTTAGATGAAATT 59.618 34.615 0.00 0.00 35.45 1.82
593 611 7.093201 ACCCATGACAGCATTTAGATGAAATTT 60.093 33.333 0.00 0.00 35.45 1.82
594 612 7.767198 CCCATGACAGCATTTAGATGAAATTTT 59.233 33.333 0.00 0.00 35.45 1.82
595 613 9.158233 CCATGACAGCATTTAGATGAAATTTTT 57.842 29.630 0.00 0.00 35.45 1.94
596 614 9.967245 CATGACAGCATTTAGATGAAATTTTTG 57.033 29.630 0.00 0.00 35.45 2.44
597 615 9.932207 ATGACAGCATTTAGATGAAATTTTTGA 57.068 25.926 0.00 0.00 35.45 2.69
598 616 9.195411 TGACAGCATTTAGATGAAATTTTTGAC 57.805 29.630 0.00 0.00 35.45 3.18
599 617 9.195411 GACAGCATTTAGATGAAATTTTTGACA 57.805 29.630 0.00 0.00 35.45 3.58
600 618 9.545105 ACAGCATTTAGATGAAATTTTTGACAA 57.455 25.926 0.00 0.00 35.45 3.18
698 731 3.322466 CCTCGGCCCACCTTGACT 61.322 66.667 0.00 0.00 0.00 3.41
737 772 3.246112 CCCGGTCCCACCTGTCAA 61.246 66.667 0.00 0.00 35.66 3.18
738 773 2.824880 CCCGGTCCCACCTGTCAAA 61.825 63.158 0.00 0.00 35.66 2.69
741 776 0.602905 CGGTCCCACCTGTCAAAGAC 60.603 60.000 0.00 0.00 35.66 3.01
748 783 2.285083 CACCTGTCAAAGACACGGAAA 58.715 47.619 16.87 0.00 37.67 3.13
772 807 2.125673 GCGCCAAGTAAGCCGAGA 60.126 61.111 0.00 0.00 0.00 4.04
773 808 2.167861 GCGCCAAGTAAGCCGAGAG 61.168 63.158 0.00 0.00 0.00 3.20
934 980 4.506255 CCCACCCGCCAATCCTCC 62.506 72.222 0.00 0.00 0.00 4.30
935 981 3.411517 CCACCCGCCAATCCTCCT 61.412 66.667 0.00 0.00 0.00 3.69
936 982 2.677228 CACCCGCCAATCCTCCTT 59.323 61.111 0.00 0.00 0.00 3.36
969 1015 4.856607 CGCGCCCGAAGTCTCCTC 62.857 72.222 0.00 0.00 36.29 3.71
1207 1622 4.285851 CCTTCTGCAAGGTCCGTC 57.714 61.111 0.00 0.00 44.11 4.79
1209 1624 0.035458 CCTTCTGCAAGGTCCGTCTT 59.965 55.000 0.00 0.00 44.11 3.01
1212 1627 1.048601 TCTGCAAGGTCCGTCTTCTT 58.951 50.000 0.00 0.00 0.00 2.52
1213 1628 1.000955 TCTGCAAGGTCCGTCTTCTTC 59.999 52.381 0.00 0.00 0.00 2.87
1214 1629 0.034896 TGCAAGGTCCGTCTTCTTCC 59.965 55.000 0.00 0.00 0.00 3.46
1232 1647 8.033626 TCTTCTTCCCTCGTTTTAGTTAGATTC 58.966 37.037 0.00 0.00 0.00 2.52
1234 1649 5.902613 TCCCTCGTTTTAGTTAGATTCGA 57.097 39.130 0.00 0.00 0.00 3.71
1243 1658 0.594284 GTTAGATTCGACGAGGCCGG 60.594 60.000 0.00 0.00 40.78 6.13
1336 1751 1.660560 CCGACGAGGACGGGTATGTT 61.661 60.000 0.00 0.00 45.65 2.71
1378 1793 1.532794 CCTCCCCTCCAGATCCTCG 60.533 68.421 0.00 0.00 0.00 4.63
1407 1822 2.231721 AGAAGTCAGGTTAGCTTCGGTC 59.768 50.000 0.00 0.00 42.28 4.79
1440 1855 1.307355 TACGTAGTAGCAGCGTGCCA 61.307 55.000 6.39 0.00 43.90 4.92
1460 1884 0.457443 GCTGCCTGGCTGGTATTTTC 59.543 55.000 24.37 4.77 38.35 2.29
1473 1897 6.398095 GCTGGTATTTTCTGCTAAAATTGGT 58.602 36.000 13.24 0.00 32.64 3.67
1622 2066 2.160822 TCTCTGTTTCTCAGCAGTGC 57.839 50.000 7.13 7.13 43.32 4.40
1713 3249 2.877691 GCATCAGGCGACCAAACC 59.122 61.111 0.00 0.00 0.00 3.27
1770 3310 7.581213 TTTCTCACAACACCAACTATCATTT 57.419 32.000 0.00 0.00 0.00 2.32
1808 3348 5.200454 GTGCATAATCTCACTGTAATTGCG 58.800 41.667 0.00 0.00 0.00 4.85
1927 3467 3.149196 TCTTCAAATCCTGGTCAGTTGC 58.851 45.455 0.00 0.00 0.00 4.17
1944 3484 6.371548 GTCAGTTGCATATCTTGAACTTGGTA 59.628 38.462 0.00 0.00 0.00 3.25
1975 3515 2.308570 TGGGACATGTCTGCATAGGTTT 59.691 45.455 24.50 0.00 33.30 3.27
1983 3523 4.460263 TGTCTGCATAGGTTTGTGAACTT 58.540 39.130 0.00 0.00 36.03 2.66
2036 3576 7.533426 CAGATCTTATTGTTTCTGGTTCAAGG 58.467 38.462 0.00 0.00 33.54 3.61
2054 3594 2.519013 AGGGATGGTTCTTTTGCACTC 58.481 47.619 0.00 0.00 0.00 3.51
2156 3696 6.210385 TGCAATCTAAATGCTCCTTTTAACCA 59.790 34.615 0.00 0.00 44.14 3.67
2300 3849 6.419413 GTCTCGAGCAAAGGTATTGAATCTAG 59.581 42.308 7.81 0.00 0.00 2.43
2301 3850 6.096987 TCTCGAGCAAAGGTATTGAATCTAGT 59.903 38.462 7.81 0.00 0.00 2.57
2302 3851 6.273825 TCGAGCAAAGGTATTGAATCTAGTC 58.726 40.000 0.00 0.00 0.00 2.59
2305 3854 6.352516 AGCAAAGGTATTGAATCTAGTCAGG 58.647 40.000 0.00 0.00 0.00 3.86
2311 3860 6.723977 AGGTATTGAATCTAGTCAGGATCCTC 59.276 42.308 12.69 0.98 0.00 3.71
2322 3872 1.280133 CAGGATCCTCTTGCTGGTGAA 59.720 52.381 12.69 0.00 31.98 3.18
2324 3874 2.579860 AGGATCCTCTTGCTGGTGAATT 59.420 45.455 9.02 0.00 0.00 2.17
2393 3943 1.195347 CGACGAGCATCACATCAGTC 58.805 55.000 0.00 0.00 33.17 3.51
2454 4004 3.009723 GCTGCAGACAAGTAAGGCATTA 58.990 45.455 20.43 0.00 33.50 1.90
2457 4007 3.274288 GCAGACAAGTAAGGCATTAGCT 58.726 45.455 0.00 0.00 41.70 3.32
2476 4026 7.828508 TTAGCTCATCCAATTTATTCTGCAT 57.171 32.000 0.00 0.00 0.00 3.96
2485 4035 8.815565 TCCAATTTATTCTGCATTTACTACCA 57.184 30.769 0.00 0.00 0.00 3.25
2498 4048 9.899661 TGCATTTACTACCAAAGTTCATATAGT 57.100 29.630 0.00 0.00 39.80 2.12
2542 4092 7.469870 GCATGCCAGTGGTATGTTTCAATTATA 60.470 37.037 32.64 0.00 45.41 0.98
2545 4095 8.976353 TGCCAGTGGTATGTTTCAATTATAAAT 58.024 29.630 11.74 0.00 0.00 1.40
2552 4102 9.762933 GGTATGTTTCAATTATAAATGCACCAT 57.237 29.630 0.00 0.00 0.00 3.55
2572 4122 4.690280 CCATTTTAAACACAATGCACCTCC 59.310 41.667 0.00 0.00 0.00 4.30
2640 4190 9.456147 TTGTACTTACAATAAATGTATGCCAGT 57.544 29.630 0.00 0.00 43.84 4.00
3120 4683 9.282247 GCATATTCTTAGTTTCTTTCATGTGTG 57.718 33.333 0.00 0.00 0.00 3.82
3230 4793 4.234574 GTTTACTTGTGGCAGGTATTTGC 58.765 43.478 0.00 0.00 43.34 3.68
3562 5138 7.048629 TCATCTTAATGTTGCCTTGTCAAAA 57.951 32.000 0.00 0.00 34.32 2.44
3570 5146 5.971763 TGTTGCCTTGTCAAAAACTACAAT 58.028 33.333 0.00 0.00 35.21 2.71
3577 5156 7.309194 GCCTTGTCAAAAACTACAATATGGACT 60.309 37.037 0.00 0.00 35.21 3.85
3584 5163 8.950210 CAAAAACTACAATATGGACTCACTCAT 58.050 33.333 0.00 0.00 0.00 2.90
3585 5164 8.498054 AAAACTACAATATGGACTCACTCATG 57.502 34.615 0.00 0.00 0.00 3.07
3586 5165 7.423844 AACTACAATATGGACTCACTCATGA 57.576 36.000 0.00 0.00 0.00 3.07
3587 5166 6.810911 ACTACAATATGGACTCACTCATGAC 58.189 40.000 0.00 0.00 0.00 3.06
3588 5167 5.946942 ACAATATGGACTCACTCATGACT 57.053 39.130 0.00 0.00 0.00 3.41
3589 5168 5.911752 ACAATATGGACTCACTCATGACTC 58.088 41.667 0.00 0.00 0.00 3.36
3590 5169 4.844998 ATATGGACTCACTCATGACTCG 57.155 45.455 0.00 0.00 0.00 4.18
3607 5186 5.681639 TGACTCGTCTCACTATGATTAGGA 58.318 41.667 0.00 0.00 0.00 2.94
3636 5236 8.206126 TCCATAATATCTGTTGGCATCTAGAA 57.794 34.615 0.00 0.00 0.00 2.10
3679 5288 2.872245 GCTGCTGACACTTTGTTCTGTA 59.128 45.455 0.00 0.00 0.00 2.74
3772 5381 2.749621 GAGGGTAACTGCTCCAAACATG 59.250 50.000 0.00 0.00 0.00 3.21
3923 5532 0.110010 GCCTGAGTCTGCGAAAAAGC 60.110 55.000 0.00 0.00 37.71 3.51
4089 5698 7.530010 TCTTGAAGTCAAAACTTTCTGACAAG 58.470 34.615 14.17 0.00 45.80 3.16
4095 5704 8.738645 AGTCAAAACTTTCTGACAAGTAAGAT 57.261 30.769 14.17 0.00 43.64 2.40
4166 5775 6.899393 TGGTGAGAATCTTGTTTTTATGCT 57.101 33.333 0.00 0.00 34.92 3.79
4342 5951 2.535012 TGAAGTGCCGTTGTACATGA 57.465 45.000 0.00 0.00 0.00 3.07
4343 5952 3.052455 TGAAGTGCCGTTGTACATGAT 57.948 42.857 0.00 0.00 0.00 2.45
4381 5990 3.571401 ACCATCTGCCTTTTCTCTTTGTG 59.429 43.478 0.00 0.00 0.00 3.33
4651 6293 7.395772 TGTTGGTCAGCTTATAAAATGATCCAA 59.604 33.333 17.86 17.86 33.98 3.53
4689 6331 6.296030 ATAATGGAGATTATTTTGGCATGGCC 60.296 38.462 17.72 8.02 39.12 5.36
4706 6348 5.634859 GCATGGCCGGAATTATTAAGAAATG 59.365 40.000 5.05 0.00 0.00 2.32
4775 6417 0.886563 CCTCTGGAGCTTGCAAAAGG 59.113 55.000 0.00 0.00 0.00 3.11
4790 6432 3.206150 CAAAAGGACATATCGGTCTGGG 58.794 50.000 0.00 0.00 37.91 4.45
4797 6439 3.239449 ACATATCGGTCTGGGCTTATGA 58.761 45.455 0.00 0.00 0.00 2.15
4814 6458 7.348201 GGCTTATGATCAATAGTTGAAACTCG 58.652 38.462 0.00 0.00 43.95 4.18
4815 6459 7.224753 GGCTTATGATCAATAGTTGAAACTCGA 59.775 37.037 0.00 0.00 43.95 4.04
4847 6491 1.640670 ACCTGCCCTTACCATCAACAT 59.359 47.619 0.00 0.00 0.00 2.71
4864 6508 6.782298 TCAACATGGTTTGTGCAAAATATG 57.218 33.333 14.97 14.97 38.99 1.78
4866 6510 6.423302 TCAACATGGTTTGTGCAAAATATGTC 59.577 34.615 19.09 2.18 38.99 3.06
4904 6548 7.266922 AGTACTTCACTGCTAATAGCTACTC 57.733 40.000 13.88 0.00 42.97 2.59
4905 6549 5.523438 ACTTCACTGCTAATAGCTACTCC 57.477 43.478 13.88 0.00 42.97 3.85
4906 6550 4.342665 ACTTCACTGCTAATAGCTACTCCC 59.657 45.833 13.88 0.00 42.97 4.30
4907 6551 4.186077 TCACTGCTAATAGCTACTCCCT 57.814 45.455 13.88 0.00 42.97 4.20
4908 6552 4.145807 TCACTGCTAATAGCTACTCCCTC 58.854 47.826 13.88 0.00 42.97 4.30
4909 6553 4.141135 TCACTGCTAATAGCTACTCCCTCT 60.141 45.833 13.88 0.00 42.97 3.69
4910 6554 4.022416 CACTGCTAATAGCTACTCCCTCTG 60.022 50.000 13.88 0.00 42.97 3.35
4911 6555 4.148838 CTGCTAATAGCTACTCCCTCTGT 58.851 47.826 13.88 0.00 42.97 3.41
4912 6556 4.145807 TGCTAATAGCTACTCCCTCTGTC 58.854 47.826 13.88 0.00 42.97 3.51
4913 6557 3.508402 GCTAATAGCTACTCCCTCTGTCC 59.492 52.174 4.79 0.00 38.45 4.02
4914 6558 3.689872 AATAGCTACTCCCTCTGTCCA 57.310 47.619 0.00 0.00 0.00 4.02
4915 6559 2.738587 TAGCTACTCCCTCTGTCCAG 57.261 55.000 0.00 0.00 0.00 3.86
4916 6560 1.003646 AGCTACTCCCTCTGTCCAGA 58.996 55.000 0.00 0.00 35.85 3.86
4917 6561 1.359474 AGCTACTCCCTCTGTCCAGAA 59.641 52.381 0.00 0.00 36.94 3.02
4918 6562 2.180276 GCTACTCCCTCTGTCCAGAAA 58.820 52.381 0.00 0.00 36.94 2.52
4919 6563 2.769095 GCTACTCCCTCTGTCCAGAAAT 59.231 50.000 0.00 0.00 36.94 2.17
4920 6564 3.961408 GCTACTCCCTCTGTCCAGAAATA 59.039 47.826 0.00 0.00 36.94 1.40
4921 6565 4.202172 GCTACTCCCTCTGTCCAGAAATAC 60.202 50.000 0.00 0.00 36.94 1.89
4922 6566 4.067944 ACTCCCTCTGTCCAGAAATACT 57.932 45.455 0.00 0.00 36.94 2.12
4923 6567 4.430441 ACTCCCTCTGTCCAGAAATACTT 58.570 43.478 0.00 0.00 36.94 2.24
4924 6568 4.223923 ACTCCCTCTGTCCAGAAATACTTG 59.776 45.833 0.00 0.00 36.94 3.16
4925 6569 4.168101 TCCCTCTGTCCAGAAATACTTGT 58.832 43.478 0.00 0.00 36.94 3.16
4926 6570 4.223032 TCCCTCTGTCCAGAAATACTTGTC 59.777 45.833 0.00 0.00 36.94 3.18
4927 6571 4.508662 CCTCTGTCCAGAAATACTTGTCC 58.491 47.826 0.00 0.00 36.94 4.02
4928 6572 4.177026 CTCTGTCCAGAAATACTTGTCCG 58.823 47.826 0.00 0.00 36.94 4.79
4929 6573 3.830178 TCTGTCCAGAAATACTTGTCCGA 59.170 43.478 0.00 0.00 33.91 4.55
4930 6574 4.082190 TCTGTCCAGAAATACTTGTCCGAG 60.082 45.833 0.00 0.00 33.91 4.63
4931 6575 3.056107 TGTCCAGAAATACTTGTCCGAGG 60.056 47.826 0.00 0.00 0.00 4.63
4932 6576 3.194968 GTCCAGAAATACTTGTCCGAGGA 59.805 47.826 0.00 0.00 0.00 3.71
4933 6577 3.835978 TCCAGAAATACTTGTCCGAGGAA 59.164 43.478 0.00 0.00 0.00 3.36
4934 6578 4.469945 TCCAGAAATACTTGTCCGAGGAAT 59.530 41.667 0.00 0.00 0.00 3.01
4935 6579 4.572389 CCAGAAATACTTGTCCGAGGAATG 59.428 45.833 0.00 0.00 0.00 2.67
4936 6580 4.572389 CAGAAATACTTGTCCGAGGAATGG 59.428 45.833 0.00 0.00 0.00 3.16
4937 6581 4.469945 AGAAATACTTGTCCGAGGAATGGA 59.530 41.667 0.00 0.00 0.00 3.41
4938 6582 5.131142 AGAAATACTTGTCCGAGGAATGGAT 59.869 40.000 0.00 0.00 37.93 3.41
4939 6583 2.698855 ACTTGTCCGAGGAATGGATG 57.301 50.000 0.00 0.00 37.93 3.51
4940 6584 1.909302 ACTTGTCCGAGGAATGGATGT 59.091 47.619 0.00 0.00 37.93 3.06
4941 6585 3.104512 ACTTGTCCGAGGAATGGATGTA 58.895 45.455 0.00 0.00 37.93 2.29
4942 6586 3.711704 ACTTGTCCGAGGAATGGATGTAT 59.288 43.478 0.00 0.00 37.93 2.29
4943 6587 4.202264 ACTTGTCCGAGGAATGGATGTATC 60.202 45.833 0.00 0.00 37.93 2.24
4944 6588 3.576861 TGTCCGAGGAATGGATGTATCT 58.423 45.455 0.00 0.00 37.93 1.98
4945 6589 4.736473 TGTCCGAGGAATGGATGTATCTA 58.264 43.478 0.00 0.00 37.93 1.98
4946 6590 4.767409 TGTCCGAGGAATGGATGTATCTAG 59.233 45.833 0.00 0.00 37.93 2.43
4947 6591 5.010933 GTCCGAGGAATGGATGTATCTAGA 58.989 45.833 0.00 0.00 37.93 2.43
4948 6592 5.654650 GTCCGAGGAATGGATGTATCTAGAT 59.345 44.000 10.73 10.73 37.93 1.98
4949 6593 5.654209 TCCGAGGAATGGATGTATCTAGATG 59.346 44.000 15.79 0.00 0.00 2.90
4950 6594 5.420421 CCGAGGAATGGATGTATCTAGATGT 59.580 44.000 15.79 1.25 0.00 3.06
4951 6595 6.603599 CCGAGGAATGGATGTATCTAGATGTA 59.396 42.308 15.79 4.44 0.00 2.29
4952 6596 7.286546 CCGAGGAATGGATGTATCTAGATGTAT 59.713 40.741 15.79 9.11 0.00 2.29
4953 6597 8.690884 CGAGGAATGGATGTATCTAGATGTATT 58.309 37.037 15.79 6.57 0.00 1.89
4990 6634 7.496529 ACATCCATTTGTATCCATTTCTACG 57.503 36.000 0.00 0.00 0.00 3.51
4991 6635 7.279615 ACATCCATTTGTATCCATTTCTACGA 58.720 34.615 0.00 0.00 0.00 3.43
4992 6636 7.226720 ACATCCATTTGTATCCATTTCTACGAC 59.773 37.037 0.00 0.00 0.00 4.34
4993 6637 6.645306 TCCATTTGTATCCATTTCTACGACA 58.355 36.000 0.00 0.00 0.00 4.35
4994 6638 7.106890 TCCATTTGTATCCATTTCTACGACAA 58.893 34.615 0.00 0.00 0.00 3.18
4995 6639 7.065324 TCCATTTGTATCCATTTCTACGACAAC 59.935 37.037 0.00 0.00 0.00 3.32
4996 6640 7.065803 CCATTTGTATCCATTTCTACGACAACT 59.934 37.037 0.00 0.00 0.00 3.16
4997 6641 9.093970 CATTTGTATCCATTTCTACGACAACTA 57.906 33.333 0.00 0.00 0.00 2.24
4998 6642 9.832445 ATTTGTATCCATTTCTACGACAACTAT 57.168 29.630 0.00 0.00 0.00 2.12
4999 6643 9.661563 TTTGTATCCATTTCTACGACAACTATT 57.338 29.630 0.00 0.00 0.00 1.73
5000 6644 9.661563 TTGTATCCATTTCTACGACAACTATTT 57.338 29.630 0.00 0.00 0.00 1.40
5001 6645 9.309516 TGTATCCATTTCTACGACAACTATTTC 57.690 33.333 0.00 0.00 0.00 2.17
5002 6646 7.787725 ATCCATTTCTACGACAACTATTTCC 57.212 36.000 0.00 0.00 0.00 3.13
5003 6647 5.808540 TCCATTTCTACGACAACTATTTCCG 59.191 40.000 0.00 0.00 0.00 4.30
5004 6648 5.006358 CCATTTCTACGACAACTATTTCCGG 59.994 44.000 0.00 0.00 0.00 5.14
5005 6649 5.389859 TTTCTACGACAACTATTTCCGGA 57.610 39.130 0.00 0.00 0.00 5.14
5006 6650 4.361451 TCTACGACAACTATTTCCGGAC 57.639 45.455 1.83 0.00 0.00 4.79
5007 6651 1.986698 ACGACAACTATTTCCGGACG 58.013 50.000 1.83 3.25 0.00 4.79
5008 6652 1.274596 CGACAACTATTTCCGGACGG 58.725 55.000 1.83 3.96 0.00 4.79
5009 6653 1.135315 CGACAACTATTTCCGGACGGA 60.135 52.381 1.83 9.76 43.52 4.69
5010 6654 2.537401 GACAACTATTTCCGGACGGAG 58.463 52.381 13.64 3.57 46.06 4.63
5011 6655 1.206371 ACAACTATTTCCGGACGGAGG 59.794 52.381 13.64 8.21 46.06 4.30
5012 6656 0.828677 AACTATTTCCGGACGGAGGG 59.171 55.000 13.64 7.89 46.06 4.30
5013 6657 0.032813 ACTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
5014 6658 0.674534 CTATTTCCGGACGGAGGGAG 59.325 60.000 13.64 8.24 46.06 4.30
5015 6659 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
5016 6660 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
5017 6661 0.967380 TTTCCGGACGGAGGGAGTAC 60.967 60.000 13.64 0.00 46.06 2.73
5018 6662 1.856539 TTCCGGACGGAGGGAGTACT 61.857 60.000 13.64 0.00 46.06 2.73
5019 6663 0.982852 TCCGGACGGAGGGAGTACTA 60.983 60.000 9.76 0.00 39.76 1.82
5020 6664 0.534652 CCGGACGGAGGGAGTACTAG 60.535 65.000 4.40 0.00 37.50 2.57
5021 6665 1.165284 CGGACGGAGGGAGTACTAGC 61.165 65.000 0.00 0.00 0.00 3.42
5022 6666 0.183252 GGACGGAGGGAGTACTAGCT 59.817 60.000 0.00 0.00 0.00 3.32
5023 6667 1.409942 GGACGGAGGGAGTACTAGCTT 60.410 57.143 0.00 0.00 0.00 3.74
5024 6668 2.158696 GGACGGAGGGAGTACTAGCTTA 60.159 54.545 0.00 0.00 0.00 3.09
5025 6669 3.549794 GACGGAGGGAGTACTAGCTTAA 58.450 50.000 0.00 0.00 0.00 1.85
5026 6670 4.143543 GACGGAGGGAGTACTAGCTTAAT 58.856 47.826 0.00 0.00 0.00 1.40
5027 6671 3.890147 ACGGAGGGAGTACTAGCTTAATG 59.110 47.826 0.00 0.00 0.00 1.90
5028 6672 3.305471 CGGAGGGAGTACTAGCTTAATGC 60.305 52.174 0.00 0.00 43.29 3.56
5029 6673 3.007074 GGAGGGAGTACTAGCTTAATGCC 59.993 52.174 0.00 0.00 44.23 4.40
5030 6674 2.973406 AGGGAGTACTAGCTTAATGCCC 59.027 50.000 0.00 0.00 44.23 5.36
5031 6675 2.704065 GGGAGTACTAGCTTAATGCCCA 59.296 50.000 0.00 0.00 44.23 5.36
5032 6676 3.328050 GGGAGTACTAGCTTAATGCCCAT 59.672 47.826 0.00 0.00 44.23 4.00
5033 6677 4.530946 GGGAGTACTAGCTTAATGCCCATA 59.469 45.833 0.00 0.00 44.23 2.74
5034 6678 5.189934 GGGAGTACTAGCTTAATGCCCATAT 59.810 44.000 0.00 0.00 44.23 1.78
5035 6679 6.296489 GGGAGTACTAGCTTAATGCCCATATT 60.296 42.308 0.00 0.00 44.23 1.28
5036 6680 7.168905 GGAGTACTAGCTTAATGCCCATATTT 58.831 38.462 0.00 0.00 44.23 1.40
5037 6681 7.665974 GGAGTACTAGCTTAATGCCCATATTTT 59.334 37.037 0.00 0.00 44.23 1.82
5038 6682 8.996651 AGTACTAGCTTAATGCCCATATTTTT 57.003 30.769 0.00 0.00 44.23 1.94
5039 6683 9.067986 AGTACTAGCTTAATGCCCATATTTTTC 57.932 33.333 0.00 0.00 44.23 2.29
5040 6684 9.067986 GTACTAGCTTAATGCCCATATTTTTCT 57.932 33.333 0.00 0.00 44.23 2.52
5041 6685 8.539117 ACTAGCTTAATGCCCATATTTTTCTT 57.461 30.769 0.00 0.00 44.23 2.52
5042 6686 8.416329 ACTAGCTTAATGCCCATATTTTTCTTG 58.584 33.333 0.00 0.00 44.23 3.02
5043 6687 6.051074 AGCTTAATGCCCATATTTTTCTTGC 58.949 36.000 0.00 0.00 44.23 4.01
5044 6688 5.050837 GCTTAATGCCCATATTTTTCTTGCG 60.051 40.000 0.00 0.00 35.15 4.85
5045 6689 2.957491 TGCCCATATTTTTCTTGCGG 57.043 45.000 0.00 0.00 0.00 5.69
5046 6690 2.451490 TGCCCATATTTTTCTTGCGGA 58.549 42.857 0.00 0.00 0.00 5.54
5047 6691 3.030291 TGCCCATATTTTTCTTGCGGAT 58.970 40.909 0.00 0.00 0.00 4.18
5048 6692 3.068024 TGCCCATATTTTTCTTGCGGATC 59.932 43.478 0.00 0.00 0.00 3.36
5049 6693 3.068024 GCCCATATTTTTCTTGCGGATCA 59.932 43.478 0.00 0.00 0.00 2.92
5050 6694 4.610945 CCCATATTTTTCTTGCGGATCAC 58.389 43.478 0.00 0.00 0.00 3.06
5051 6695 4.097741 CCCATATTTTTCTTGCGGATCACA 59.902 41.667 0.00 0.00 0.00 3.58
5052 6696 5.394005 CCCATATTTTTCTTGCGGATCACAA 60.394 40.000 0.00 0.00 0.00 3.33
5053 6697 6.275335 CCATATTTTTCTTGCGGATCACAAT 58.725 36.000 0.00 0.00 0.00 2.71
5054 6698 6.418819 CCATATTTTTCTTGCGGATCACAATC 59.581 38.462 0.00 0.00 0.00 2.67
5055 6699 4.844998 TTTTTCTTGCGGATCACAATCA 57.155 36.364 0.00 0.00 33.21 2.57
5056 6700 5.389859 TTTTTCTTGCGGATCACAATCAT 57.610 34.783 0.00 0.00 33.21 2.45
5057 6701 6.507958 TTTTTCTTGCGGATCACAATCATA 57.492 33.333 0.00 0.00 33.21 2.15
5058 6702 6.698008 TTTTCTTGCGGATCACAATCATAT 57.302 33.333 0.00 0.00 33.21 1.78
5059 6703 6.698008 TTTCTTGCGGATCACAATCATATT 57.302 33.333 0.00 0.00 33.21 1.28
5060 6704 5.678132 TCTTGCGGATCACAATCATATTG 57.322 39.130 0.00 0.00 33.21 1.90
5061 6705 5.125356 TCTTGCGGATCACAATCATATTGT 58.875 37.500 0.00 0.00 33.21 2.71
5062 6706 5.589855 TCTTGCGGATCACAATCATATTGTT 59.410 36.000 2.59 0.00 33.21 2.83
5063 6707 5.833406 TGCGGATCACAATCATATTGTTT 57.167 34.783 2.59 0.00 33.21 2.83
5064 6708 5.580661 TGCGGATCACAATCATATTGTTTG 58.419 37.500 2.59 0.00 34.26 2.93
5065 6709 5.356470 TGCGGATCACAATCATATTGTTTGA 59.644 36.000 2.59 0.00 32.84 2.69
5066 6710 6.127786 TGCGGATCACAATCATATTGTTTGAA 60.128 34.615 2.59 0.00 32.84 2.69
5067 6711 6.197096 GCGGATCACAATCATATTGTTTGAAC 59.803 38.462 2.59 0.00 32.84 3.18
5068 6712 7.249858 CGGATCACAATCATATTGTTTGAACA 58.750 34.615 2.59 0.00 32.84 3.18
5069 6713 7.916977 CGGATCACAATCATATTGTTTGAACAT 59.083 33.333 2.59 0.00 34.62 2.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 3.373439 GCGAGATCTCTGTTGCAGAAAAT 59.627 43.478 20.26 0.00 40.18 1.82
67 69 7.383029 ACTCGTGTCGTGTGATCTTTAAAATTA 59.617 33.333 0.00 0.00 32.42 1.40
225 241 7.676947 ACTATACCTCTGTTGCAAAAGTTCTA 58.323 34.615 16.28 4.76 0.00 2.10
266 282 0.096976 CGCAACATTAGCTCCGTTGG 59.903 55.000 18.88 9.43 40.26 3.77
372 388 1.520787 GTAGATGTCGTTGCCGGGG 60.521 63.158 2.18 0.00 33.95 5.73
389 407 2.203294 GCAACCCGACCCTGTTGT 60.203 61.111 0.00 0.00 42.91 3.32
398 416 2.611225 AAAGCATTTTTGCAACCCGA 57.389 40.000 0.00 0.00 31.62 5.14
419 437 0.169230 TGCAACTTGACGCGTGTTTT 59.831 45.000 20.70 0.49 0.00 2.43
446 464 3.307269 GGGAGCCTACTTCCGTTACTTTT 60.307 47.826 0.00 0.00 29.47 2.27
487 505 1.480683 CCTCCCTGGCCGTTAGATCTA 60.481 57.143 0.00 0.00 0.00 1.98
558 576 2.499289 TGCTGTCATGGGTGTTTTTGTT 59.501 40.909 0.00 0.00 0.00 2.83
559 577 2.106566 TGCTGTCATGGGTGTTTTTGT 58.893 42.857 0.00 0.00 0.00 2.83
560 578 2.886862 TGCTGTCATGGGTGTTTTTG 57.113 45.000 0.00 0.00 0.00 2.44
561 579 4.420522 AAATGCTGTCATGGGTGTTTTT 57.579 36.364 0.00 0.00 32.23 1.94
562 580 4.832266 TCTAAATGCTGTCATGGGTGTTTT 59.168 37.500 0.00 0.00 32.23 2.43
563 581 4.406456 TCTAAATGCTGTCATGGGTGTTT 58.594 39.130 0.00 0.00 32.23 2.83
564 582 4.032960 TCTAAATGCTGTCATGGGTGTT 57.967 40.909 0.00 0.00 32.23 3.32
565 583 3.719268 TCTAAATGCTGTCATGGGTGT 57.281 42.857 0.00 0.00 32.23 4.16
566 584 4.201657 TCATCTAAATGCTGTCATGGGTG 58.798 43.478 0.00 0.00 32.23 4.61
567 585 4.508551 TCATCTAAATGCTGTCATGGGT 57.491 40.909 0.00 0.00 32.23 4.51
568 586 5.840243 TTTCATCTAAATGCTGTCATGGG 57.160 39.130 0.00 0.00 32.23 4.00
569 587 8.712285 AAAATTTCATCTAAATGCTGTCATGG 57.288 30.769 0.00 0.00 37.85 3.66
570 588 9.967245 CAAAAATTTCATCTAAATGCTGTCATG 57.033 29.630 0.00 0.00 37.85 3.07
571 589 9.932207 TCAAAAATTTCATCTAAATGCTGTCAT 57.068 25.926 0.00 0.00 37.85 3.06
572 590 9.195411 GTCAAAAATTTCATCTAAATGCTGTCA 57.805 29.630 0.00 0.00 37.85 3.58
573 591 9.195411 TGTCAAAAATTTCATCTAAATGCTGTC 57.805 29.630 0.00 0.00 37.85 3.51
574 592 9.545105 TTGTCAAAAATTTCATCTAAATGCTGT 57.455 25.926 0.00 0.00 37.85 4.40
643 661 0.460987 CTCGGGCCAGCTACAAAGAG 60.461 60.000 4.39 0.00 0.00 2.85
644 662 0.902984 TCTCGGGCCAGCTACAAAGA 60.903 55.000 4.39 0.00 0.00 2.52
698 731 2.741517 CGAATGTGTGAACATGTGGCTA 59.258 45.455 0.00 0.00 0.00 3.93
737 772 1.227734 CGTGGGGTTTCCGTGTCTT 60.228 57.895 0.00 0.00 38.76 3.01
738 773 2.424302 CGTGGGGTTTCCGTGTCT 59.576 61.111 0.00 0.00 38.76 3.41
748 783 3.894547 CTTACTTGGCGCGTGGGGT 62.895 63.158 8.43 5.07 0.00 4.95
772 807 2.046314 CGGCGGTGGTGAAATCCT 60.046 61.111 0.00 0.00 0.00 3.24
773 808 3.810896 GCGGCGGTGGTGAAATCC 61.811 66.667 9.78 0.00 0.00 3.01
884 930 3.076032 AGGTTTATGGGAGGAGTTTTGCT 59.924 43.478 0.00 0.00 0.00 3.91
934 980 0.965363 CGAATTGGGGTGGTGGGAAG 60.965 60.000 0.00 0.00 0.00 3.46
935 981 1.075836 CGAATTGGGGTGGTGGGAA 59.924 57.895 0.00 0.00 0.00 3.97
936 982 2.760477 CGAATTGGGGTGGTGGGA 59.240 61.111 0.00 0.00 0.00 4.37
963 1009 1.990160 GAGGGAGCGAGGAGAGGAGA 61.990 65.000 0.00 0.00 0.00 3.71
1203 1618 2.165319 AAAACGAGGGAAGAAGACGG 57.835 50.000 0.00 0.00 0.00 4.79
1207 1622 7.009357 CGAATCTAACTAAAACGAGGGAAGAAG 59.991 40.741 0.00 0.00 0.00 2.85
1209 1624 6.151648 TCGAATCTAACTAAAACGAGGGAAGA 59.848 38.462 0.00 0.00 0.00 2.87
1212 1627 5.644644 GTCGAATCTAACTAAAACGAGGGA 58.355 41.667 0.00 0.00 0.00 4.20
1213 1628 4.498323 CGTCGAATCTAACTAAAACGAGGG 59.502 45.833 0.00 0.00 33.03 4.30
1214 1629 5.327091 TCGTCGAATCTAACTAAAACGAGG 58.673 41.667 0.00 0.00 33.48 4.63
1336 1751 2.889617 CGGGTGTCGTAGATGGCA 59.110 61.111 0.00 0.00 40.67 4.92
1378 1793 4.647399 AGCTAACCTGACTTCTCTATGGAC 59.353 45.833 0.00 0.00 0.00 4.02
1424 1839 2.167861 GCTGGCACGCTGCTACTAC 61.168 63.158 9.31 0.00 44.28 2.73
1427 1842 3.494336 CAGCTGGCACGCTGCTAC 61.494 66.667 20.47 1.38 45.10 3.58
1440 1855 0.040204 AAAATACCAGCCAGGCAGCT 59.960 50.000 15.80 0.00 46.45 4.24
1449 1864 6.398095 ACCAATTTTAGCAGAAAATACCAGC 58.602 36.000 9.10 0.00 30.38 4.85
1460 1884 4.706476 TCAGATTGGGACCAATTTTAGCAG 59.294 41.667 17.04 2.64 45.50 4.24
1473 1897 3.267812 AGGAGCAAGATTTCAGATTGGGA 59.732 43.478 0.00 0.00 0.00 4.37
1622 2066 3.713858 TGCCAGAGACACACAAAAATG 57.286 42.857 0.00 0.00 0.00 2.32
1713 3249 6.407475 TTGATTGATCATGTTGTACTCACG 57.593 37.500 0.00 0.00 36.56 4.35
1808 3348 8.857098 TCCATATCTTTACCTGATACAGTACAC 58.143 37.037 0.00 0.00 30.38 2.90
1927 3467 9.167311 AGCTAAGTTTACCAAGTTCAAGATATG 57.833 33.333 0.00 0.00 0.00 1.78
1944 3484 4.074970 CAGACATGTCCCAAGCTAAGTTT 58.925 43.478 22.21 0.00 0.00 2.66
2005 3545 9.851686 AACCAGAAACAATAAGATCTGCATATA 57.148 29.630 0.00 0.00 38.34 0.86
2006 3546 8.757982 AACCAGAAACAATAAGATCTGCATAT 57.242 30.769 0.00 0.00 38.34 1.78
2036 3576 2.229784 CCAGAGTGCAAAAGAACCATCC 59.770 50.000 0.00 0.00 0.00 3.51
2054 3594 3.760580 GGGTCACATCTTAGATCCCAG 57.239 52.381 10.72 0.00 34.20 4.45
2156 3696 7.750229 ATTGCTACGGATATTTGATGATTGT 57.250 32.000 0.00 0.00 0.00 2.71
2300 3849 0.908198 ACCAGCAAGAGGATCCTGAC 59.092 55.000 22.02 5.53 33.66 3.51
2301 3850 0.907486 CACCAGCAAGAGGATCCTGA 59.093 55.000 22.02 0.00 33.66 3.86
2302 3851 0.907486 TCACCAGCAAGAGGATCCTG 59.093 55.000 22.02 7.11 33.66 3.86
2305 3854 4.943705 TGTAAATTCACCAGCAAGAGGATC 59.056 41.667 0.00 0.00 0.00 3.36
2311 3860 3.191371 GGGAGTGTAAATTCACCAGCAAG 59.809 47.826 0.00 0.00 38.91 4.01
2322 3872 4.675063 ATGAACCCAAGGGAGTGTAAAT 57.325 40.909 13.15 0.00 38.96 1.40
2324 3874 4.148838 CAAATGAACCCAAGGGAGTGTAA 58.851 43.478 13.15 0.00 38.96 2.41
2454 4004 6.726490 AATGCAGAATAAATTGGATGAGCT 57.274 33.333 0.00 0.00 0.00 4.09
2498 4048 5.336929 GGCATGCATGATCAGCCATATAAAA 60.337 40.000 30.64 0.00 44.59 1.52
2513 4063 1.395635 ACATACCACTGGCATGCATG 58.604 50.000 22.70 22.70 0.00 4.06
2542 4092 6.039047 TGCATTGTGTTTAAAATGGTGCATTT 59.961 30.769 10.57 0.00 44.62 2.32
2545 4095 4.272018 GTGCATTGTGTTTAAAATGGTGCA 59.728 37.500 10.57 10.57 37.69 4.57
2552 4102 5.606348 AAGGAGGTGCATTGTGTTTAAAA 57.394 34.783 0.00 0.00 0.00 1.52
2556 4106 2.765699 ACAAAGGAGGTGCATTGTGTTT 59.234 40.909 0.47 0.00 34.88 2.83
2629 4179 5.726980 AATTTCACAACACTGGCATACAT 57.273 34.783 0.00 0.00 0.00 2.29
2631 4181 5.177327 CCAAAATTTCACAACACTGGCATAC 59.823 40.000 0.00 0.00 0.00 2.39
2633 4183 4.128643 CCAAAATTTCACAACACTGGCAT 58.871 39.130 0.00 0.00 0.00 4.40
2640 4190 5.508153 CCGTGTATCCCAAAATTTCACAACA 60.508 40.000 0.00 0.00 0.00 3.33
2761 4311 3.330701 TCCCTGTTAGCCTTGAAACTGAT 59.669 43.478 0.00 0.00 0.00 2.90
3230 4793 9.788960 GTAAAAGAAAAGGTAATAGGAATGCAG 57.211 33.333 0.00 0.00 0.00 4.41
3294 4857 6.460953 GCTGATCCACCTACAAAAGTGAAAAA 60.461 38.462 0.00 0.00 36.01 1.94
3304 4867 1.951209 TCAGGCTGATCCACCTACAA 58.049 50.000 14.43 0.00 37.29 2.41
3562 5138 7.124901 AGTCATGAGTGAGTCCATATTGTAGTT 59.875 37.037 1.14 0.00 32.51 2.24
3577 5156 2.784347 AGTGAGACGAGTCATGAGTGA 58.216 47.619 8.05 0.00 0.00 3.41
3584 5163 5.681639 TCCTAATCATAGTGAGACGAGTCA 58.318 41.667 5.99 0.00 0.00 3.41
3585 5164 5.334569 GCTCCTAATCATAGTGAGACGAGTC 60.335 48.000 0.00 0.00 32.52 3.36
3586 5165 4.517453 GCTCCTAATCATAGTGAGACGAGT 59.483 45.833 0.00 0.00 32.52 4.18
3587 5166 4.517075 TGCTCCTAATCATAGTGAGACGAG 59.483 45.833 0.00 0.00 32.52 4.18
3588 5167 4.461198 TGCTCCTAATCATAGTGAGACGA 58.539 43.478 0.00 0.00 32.52 4.20
3589 5168 4.837896 TGCTCCTAATCATAGTGAGACG 57.162 45.455 0.00 0.00 32.52 4.18
3590 5169 5.244851 TGGATGCTCCTAATCATAGTGAGAC 59.755 44.000 4.21 0.00 37.46 3.36
3607 5186 4.989277 TGCCAACAGATATTATGGATGCT 58.011 39.130 0.00 0.00 34.82 3.79
3621 5200 7.044181 TCTAACTGAATTCTAGATGCCAACAG 58.956 38.462 7.05 0.00 0.00 3.16
3636 5236 7.862873 GCAGCAGTTTAAAGTTTCTAACTGAAT 59.137 33.333 29.44 20.46 46.43 2.57
3639 5239 6.634436 CAGCAGCAGTTTAAAGTTTCTAACTG 59.366 38.462 25.03 25.03 46.31 3.16
3640 5240 6.542370 TCAGCAGCAGTTTAAAGTTTCTAACT 59.458 34.615 9.20 9.20 45.46 2.24
3679 5288 3.007506 TGTTCCATACACGAACCTGATGT 59.992 43.478 0.00 0.00 39.10 3.06
3923 5532 1.326548 CCGAAATACCGAAAAGGCTCG 59.673 52.381 0.00 0.00 46.52 5.03
4095 5704 6.518032 GCAGCTCAGAAGAATCCATGATACTA 60.518 42.308 0.00 0.00 0.00 1.82
4162 5771 2.235650 TCAGCAGAGCAAGTTCTAGCAT 59.764 45.455 9.53 0.00 0.00 3.79
4166 5775 6.536582 GTCAATTATCAGCAGAGCAAGTTCTA 59.463 38.462 0.00 0.00 0.00 2.10
4194 5803 1.003116 GCAATGAGTTAGCATGCCGAG 60.003 52.381 15.66 0.00 0.00 4.63
4381 5990 5.803020 AACAAGCTCGATGAGGAAATAAC 57.197 39.130 0.00 0.00 0.00 1.89
4441 6057 5.358922 GGAAATCTCACAGAGATCTCCTTG 58.641 45.833 19.30 15.69 46.90 3.61
4507 6126 8.217131 TCCAAGAGATAATTGTCAACATCATG 57.783 34.615 4.92 0.00 0.00 3.07
4651 6293 1.858910 TCCATTATTGACCATGGCCCT 59.141 47.619 13.04 0.00 40.03 5.19
4739 6381 4.561938 CCAGAGGCATTGAAAGATTGCAAA 60.562 41.667 1.71 0.00 38.12 3.68
4775 6417 3.258372 TCATAAGCCCAGACCGATATGTC 59.742 47.826 0.00 0.00 35.43 3.06
4790 6432 8.131455 TCGAGTTTCAACTATTGATCATAAGC 57.869 34.615 0.00 0.00 39.88 3.09
4797 6439 6.313905 GTGTCCATCGAGTTTCAACTATTGAT 59.686 38.462 0.00 0.00 39.88 2.57
4814 6458 1.168714 GGCAGGTCAAAGTGTCCATC 58.831 55.000 0.00 0.00 0.00 3.51
4815 6459 0.251341 GGGCAGGTCAAAGTGTCCAT 60.251 55.000 0.00 0.00 38.41 3.41
4847 6491 5.781210 TCTGACATATTTTGCACAAACCA 57.219 34.783 0.00 0.00 0.00 3.67
4854 6498 7.833682 TCCCTCTAATTTCTGACATATTTTGCA 59.166 33.333 0.00 0.00 0.00 4.08
4855 6499 8.225603 TCCCTCTAATTTCTGACATATTTTGC 57.774 34.615 0.00 0.00 0.00 3.68
4864 6508 7.036829 GTGAAGTACTCCCTCTAATTTCTGAC 58.963 42.308 0.00 0.00 0.00 3.51
4866 6510 7.038659 CAGTGAAGTACTCCCTCTAATTTCTG 58.961 42.308 0.00 0.00 37.60 3.02
4904 6548 4.508662 GACAAGTATTTCTGGACAGAGGG 58.491 47.826 1.92 0.00 38.88 4.30
4905 6549 4.508662 GGACAAGTATTTCTGGACAGAGG 58.491 47.826 1.92 0.00 38.88 3.69
4906 6550 4.082190 TCGGACAAGTATTTCTGGACAGAG 60.082 45.833 1.92 0.00 38.88 3.35
4907 6551 3.830178 TCGGACAAGTATTTCTGGACAGA 59.170 43.478 0.00 0.00 35.27 3.41
4908 6552 4.177026 CTCGGACAAGTATTTCTGGACAG 58.823 47.826 0.00 0.00 0.00 3.51
4909 6553 3.056107 CCTCGGACAAGTATTTCTGGACA 60.056 47.826 0.00 0.00 0.00 4.02
4910 6554 3.194968 TCCTCGGACAAGTATTTCTGGAC 59.805 47.826 0.00 0.00 0.00 4.02
4911 6555 3.437213 TCCTCGGACAAGTATTTCTGGA 58.563 45.455 0.00 0.00 0.00 3.86
4912 6556 3.887621 TCCTCGGACAAGTATTTCTGG 57.112 47.619 0.00 0.00 0.00 3.86
4913 6557 4.572389 CCATTCCTCGGACAAGTATTTCTG 59.428 45.833 0.00 0.00 0.00 3.02
4914 6558 4.469945 TCCATTCCTCGGACAAGTATTTCT 59.530 41.667 0.00 0.00 0.00 2.52
4915 6559 4.766375 TCCATTCCTCGGACAAGTATTTC 58.234 43.478 0.00 0.00 0.00 2.17
4916 6560 4.837093 TCCATTCCTCGGACAAGTATTT 57.163 40.909 0.00 0.00 0.00 1.40
4917 6561 4.164221 ACATCCATTCCTCGGACAAGTATT 59.836 41.667 0.00 0.00 34.69 1.89
4918 6562 3.711704 ACATCCATTCCTCGGACAAGTAT 59.288 43.478 0.00 0.00 34.69 2.12
4919 6563 3.104512 ACATCCATTCCTCGGACAAGTA 58.895 45.455 0.00 0.00 34.69 2.24
4920 6564 1.909302 ACATCCATTCCTCGGACAAGT 59.091 47.619 0.00 0.00 34.69 3.16
4921 6565 2.698855 ACATCCATTCCTCGGACAAG 57.301 50.000 0.00 0.00 34.69 3.16
4922 6566 3.967326 AGATACATCCATTCCTCGGACAA 59.033 43.478 0.00 0.00 34.69 3.18
4923 6567 3.576861 AGATACATCCATTCCTCGGACA 58.423 45.455 0.00 0.00 34.69 4.02
4924 6568 5.010933 TCTAGATACATCCATTCCTCGGAC 58.989 45.833 0.00 0.00 34.69 4.79
4925 6569 5.256806 TCTAGATACATCCATTCCTCGGA 57.743 43.478 0.00 0.00 36.84 4.55
4926 6570 5.420421 ACATCTAGATACATCCATTCCTCGG 59.580 44.000 4.54 0.00 0.00 4.63
4927 6571 6.522625 ACATCTAGATACATCCATTCCTCG 57.477 41.667 4.54 0.00 0.00 4.63
4976 6620 8.762426 GGAAATAGTTGTCGTAGAAATGGATAC 58.238 37.037 0.00 0.00 39.69 2.24
4977 6621 7.650504 CGGAAATAGTTGTCGTAGAAATGGATA 59.349 37.037 0.00 0.00 39.69 2.59
4978 6622 6.479001 CGGAAATAGTTGTCGTAGAAATGGAT 59.521 38.462 0.00 0.00 39.69 3.41
4979 6623 5.808540 CGGAAATAGTTGTCGTAGAAATGGA 59.191 40.000 0.00 0.00 39.69 3.41
4980 6624 5.006358 CCGGAAATAGTTGTCGTAGAAATGG 59.994 44.000 0.00 0.00 39.69 3.16
4981 6625 5.808540 TCCGGAAATAGTTGTCGTAGAAATG 59.191 40.000 0.00 0.00 39.69 2.32
4982 6626 5.809051 GTCCGGAAATAGTTGTCGTAGAAAT 59.191 40.000 5.23 0.00 39.69 2.17
4983 6627 5.163513 GTCCGGAAATAGTTGTCGTAGAAA 58.836 41.667 5.23 0.00 39.69 2.52
4984 6628 4.672542 CGTCCGGAAATAGTTGTCGTAGAA 60.673 45.833 5.23 0.00 39.69 2.10
4985 6629 3.181507 CGTCCGGAAATAGTTGTCGTAGA 60.182 47.826 5.23 0.00 0.00 2.59
4986 6630 3.103738 CGTCCGGAAATAGTTGTCGTAG 58.896 50.000 5.23 0.00 0.00 3.51
4987 6631 2.159393 CCGTCCGGAAATAGTTGTCGTA 60.159 50.000 5.23 0.00 37.50 3.43
4988 6632 1.403249 CCGTCCGGAAATAGTTGTCGT 60.403 52.381 5.23 0.00 37.50 4.34
4989 6633 1.135315 TCCGTCCGGAAATAGTTGTCG 60.135 52.381 5.23 1.25 42.05 4.35
4990 6634 2.537401 CTCCGTCCGGAAATAGTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
4991 6635 1.206371 CCTCCGTCCGGAAATAGTTGT 59.794 52.381 5.23 0.00 44.66 3.32
4992 6636 1.472728 CCCTCCGTCCGGAAATAGTTG 60.473 57.143 5.23 0.00 44.66 3.16
4993 6637 0.828677 CCCTCCGTCCGGAAATAGTT 59.171 55.000 5.23 0.00 44.66 2.24
4994 6638 0.032813 TCCCTCCGTCCGGAAATAGT 60.033 55.000 5.23 0.00 44.66 2.12
4995 6639 0.674534 CTCCCTCCGTCCGGAAATAG 59.325 60.000 5.23 3.15 44.66 1.73
4996 6640 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
4997 6641 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
4998 6642 0.967380 GTACTCCCTCCGTCCGGAAA 60.967 60.000 5.23 0.00 44.66 3.13
4999 6643 1.379044 GTACTCCCTCCGTCCGGAA 60.379 63.158 5.23 0.00 44.66 4.30
5000 6644 0.982852 TAGTACTCCCTCCGTCCGGA 60.983 60.000 0.00 0.00 42.90 5.14
5001 6645 0.534652 CTAGTACTCCCTCCGTCCGG 60.535 65.000 0.00 0.00 0.00 5.14
5002 6646 1.165284 GCTAGTACTCCCTCCGTCCG 61.165 65.000 0.00 0.00 0.00 4.79
5003 6647 0.183252 AGCTAGTACTCCCTCCGTCC 59.817 60.000 0.00 0.00 0.00 4.79
5004 6648 2.055684 AAGCTAGTACTCCCTCCGTC 57.944 55.000 0.00 0.00 0.00 4.79
5005 6649 3.659183 TTAAGCTAGTACTCCCTCCGT 57.341 47.619 0.00 0.00 0.00 4.69
5006 6650 3.305471 GCATTAAGCTAGTACTCCCTCCG 60.305 52.174 0.00 0.00 41.15 4.63
5007 6651 3.007074 GGCATTAAGCTAGTACTCCCTCC 59.993 52.174 0.00 0.00 44.79 4.30
5008 6652 3.007074 GGGCATTAAGCTAGTACTCCCTC 59.993 52.174 0.00 0.00 44.79 4.30
5009 6653 2.973406 GGGCATTAAGCTAGTACTCCCT 59.027 50.000 0.00 0.00 44.79 4.20
5010 6654 2.704065 TGGGCATTAAGCTAGTACTCCC 59.296 50.000 0.00 0.52 44.79 4.30
5011 6655 4.625607 ATGGGCATTAAGCTAGTACTCC 57.374 45.455 0.00 0.00 44.79 3.85
5012 6656 8.622948 AAAATATGGGCATTAAGCTAGTACTC 57.377 34.615 0.00 0.00 44.79 2.59
5013 6657 8.996651 AAAAATATGGGCATTAAGCTAGTACT 57.003 30.769 0.00 0.00 44.79 2.73
5014 6658 9.067986 AGAAAAATATGGGCATTAAGCTAGTAC 57.932 33.333 0.00 0.00 44.79 2.73
5015 6659 9.640952 AAGAAAAATATGGGCATTAAGCTAGTA 57.359 29.630 0.00 0.00 44.79 1.82
5016 6660 8.416329 CAAGAAAAATATGGGCATTAAGCTAGT 58.584 33.333 0.00 0.00 44.79 2.57
5017 6661 7.383300 GCAAGAAAAATATGGGCATTAAGCTAG 59.617 37.037 0.00 0.00 44.79 3.42
5018 6662 7.209475 GCAAGAAAAATATGGGCATTAAGCTA 58.791 34.615 0.00 0.00 44.79 3.32
5019 6663 6.051074 GCAAGAAAAATATGGGCATTAAGCT 58.949 36.000 0.00 0.00 44.79 3.74
5020 6664 5.050837 CGCAAGAAAAATATGGGCATTAAGC 60.051 40.000 0.00 0.00 41.67 3.09
5021 6665 5.463061 CCGCAAGAAAAATATGGGCATTAAG 59.537 40.000 0.00 0.00 43.02 1.85
5022 6666 5.127845 TCCGCAAGAAAAATATGGGCATTAA 59.872 36.000 0.00 0.00 43.02 1.40
5023 6667 4.646945 TCCGCAAGAAAAATATGGGCATTA 59.353 37.500 0.00 0.00 43.02 1.90
5024 6668 3.450457 TCCGCAAGAAAAATATGGGCATT 59.550 39.130 0.00 0.00 43.02 3.56
5025 6669 3.030291 TCCGCAAGAAAAATATGGGCAT 58.970 40.909 0.00 0.00 43.02 4.40
5026 6670 2.451490 TCCGCAAGAAAAATATGGGCA 58.549 42.857 0.00 0.00 43.02 5.36
5027 6671 3.068024 TGATCCGCAAGAAAAATATGGGC 59.932 43.478 0.00 0.00 43.02 5.36
5028 6672 4.097741 TGTGATCCGCAAGAAAAATATGGG 59.902 41.667 0.00 0.00 43.02 4.00
5029 6673 5.247507 TGTGATCCGCAAGAAAAATATGG 57.752 39.130 0.00 0.00 43.02 2.74
5030 6674 6.974048 TGATTGTGATCCGCAAGAAAAATATG 59.026 34.615 6.10 0.00 37.28 1.78
5031 6675 7.099266 TGATTGTGATCCGCAAGAAAAATAT 57.901 32.000 6.10 0.00 37.28 1.28
5032 6676 6.507958 TGATTGTGATCCGCAAGAAAAATA 57.492 33.333 6.10 0.00 37.28 1.40
5033 6677 5.389859 TGATTGTGATCCGCAAGAAAAAT 57.610 34.783 6.10 0.00 37.28 1.82
5034 6678 4.844998 TGATTGTGATCCGCAAGAAAAA 57.155 36.364 6.10 0.00 37.28 1.94
5035 6679 6.698008 ATATGATTGTGATCCGCAAGAAAA 57.302 33.333 6.10 0.00 37.28 2.29
5036 6680 6.095300 ACAATATGATTGTGATCCGCAAGAAA 59.905 34.615 4.08 0.00 37.28 2.52
5037 6681 5.589855 ACAATATGATTGTGATCCGCAAGAA 59.410 36.000 4.08 0.00 37.28 2.52
5038 6682 5.125356 ACAATATGATTGTGATCCGCAAGA 58.875 37.500 4.08 0.00 37.28 3.02
5039 6683 5.428496 ACAATATGATTGTGATCCGCAAG 57.572 39.130 4.08 0.00 37.28 4.01
5040 6684 5.833406 AACAATATGATTGTGATCCGCAA 57.167 34.783 5.63 2.88 38.24 4.85
5041 6685 5.356470 TCAAACAATATGATTGTGATCCGCA 59.644 36.000 5.63 0.00 32.79 5.69
5042 6686 5.820131 TCAAACAATATGATTGTGATCCGC 58.180 37.500 5.63 0.00 32.79 5.54
5043 6687 7.249858 TGTTCAAACAATATGATTGTGATCCG 58.750 34.615 5.63 0.00 35.67 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.