Multiple sequence alignment - TraesCS4D01G030600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G030600 chr4D 100.000 2675 0 0 1 2675 14435399 14432725 0.000000e+00 4940.0
1 TraesCS4D01G030600 chr4D 91.911 989 67 9 732 1717 14914366 14915344 0.000000e+00 1371.0
2 TraesCS4D01G030600 chr4D 91.165 996 67 10 732 1717 14460005 14459021 0.000000e+00 1332.0
3 TraesCS4D01G030600 chr4D 90.433 993 77 11 726 1715 14909121 14910098 0.000000e+00 1291.0
4 TraesCS4D01G030600 chr4D 90.404 990 76 14 732 1715 14862547 14863523 0.000000e+00 1284.0
5 TraesCS4D01G030600 chr4D 88.506 957 75 15 764 1715 14857704 14858630 0.000000e+00 1125.0
6 TraesCS4D01G030600 chr4D 84.682 927 105 22 779 1695 14839410 14838511 0.000000e+00 891.0
7 TraesCS4D01G030600 chr4D 89.666 658 39 10 1891 2534 14915336 14915978 0.000000e+00 811.0
8 TraesCS4D01G030600 chr4D 88.622 624 52 8 1903 2514 14896157 14896773 0.000000e+00 741.0
9 TraesCS4D01G030600 chr4D 86.626 658 68 15 1892 2533 14852047 14852700 0.000000e+00 710.0
10 TraesCS4D01G030600 chr4D 86.604 642 56 17 1891 2506 14863517 14864154 0.000000e+00 682.0
11 TraesCS4D01G030600 chr4D 79.825 570 82 24 1891 2436 14473930 14474490 4.180000e-103 385.0
12 TraesCS4D01G030600 chr4D 85.350 314 34 9 2203 2514 14458738 14458435 5.560000e-82 315.0
13 TraesCS4D01G030600 chr4D 93.689 206 8 5 1708 1910 329878788 329878585 1.200000e-78 303.0
14 TraesCS4D01G030600 chr4D 85.075 134 12 6 764 897 14517461 14517586 2.160000e-26 130.0
15 TraesCS4D01G030600 chr4D 84.328 134 13 4 1903 2028 14838513 14838380 1.010000e-24 124.0
16 TraesCS4D01G030600 chr4B 91.810 989 65 10 725 1711 24759173 24760147 0.000000e+00 1363.0
17 TraesCS4D01G030600 chr4B 88.477 998 68 28 724 1715 24741401 24742357 0.000000e+00 1162.0
18 TraesCS4D01G030600 chr4B 88.088 999 90 14 724 1717 24733012 24733986 0.000000e+00 1158.0
19 TraesCS4D01G030600 chr4B 88.153 996 83 20 726 1714 24745528 24746495 0.000000e+00 1153.0
20 TraesCS4D01G030600 chr4B 87.773 777 69 9 1891 2653 24746490 24747254 0.000000e+00 885.0
21 TraesCS4D01G030600 chr4B 88.365 636 53 7 1899 2519 24760153 24760782 0.000000e+00 745.0
22 TraesCS4D01G030600 chr4B 93.689 206 8 4 1708 1910 206242910 206242707 1.200000e-78 303.0
23 TraesCS4D01G030600 chr4B 93.204 206 9 5 1708 1910 300587665 300587462 5.600000e-77 298.0
24 TraesCS4D01G030600 chr4B 87.500 128 14 1 1903 2028 24680904 24680777 2.150000e-31 147.0
25 TraesCS4D01G030600 chr4B 94.937 79 4 0 192 270 24759072 24759150 1.010000e-24 124.0
26 TraesCS4D01G030600 chr4A 91.247 914 67 6 789 1699 456450174 456449271 0.000000e+00 1232.0
27 TraesCS4D01G030600 chr4A 87.084 782 64 16 1891 2653 586682024 586681261 0.000000e+00 850.0
28 TraesCS4D01G030600 chr4A 86.609 575 56 12 1891 2448 586699190 586698620 1.360000e-172 616.0
29 TraesCS4D01G030600 chr4A 87.173 421 29 11 2241 2653 456420488 456420085 3.140000e-124 455.0
30 TraesCS4D01G030600 chr4A 87.705 366 32 6 1891 2245 456436429 456436066 5.330000e-112 414.0
31 TraesCS4D01G030600 chr3B 88.288 999 81 19 724 1714 452717200 452716230 0.000000e+00 1164.0
32 TraesCS4D01G030600 chr3B 87.147 778 73 10 1891 2653 452716235 452715470 0.000000e+00 857.0
33 TraesCS4D01G030600 chr3B 84.043 94 8 6 730 820 452728679 452728768 1.710000e-12 84.2
34 TraesCS4D01G030600 chr5D 91.990 412 28 5 317 727 507857017 507857424 8.310000e-160 573.0
35 TraesCS4D01G030600 chr5D 91.727 411 29 5 316 723 541960120 541959712 1.390000e-157 566.0
36 TraesCS4D01G030600 chr5D 91.198 409 28 6 317 723 508274530 508274128 1.400000e-152 549.0
37 TraesCS4D01G030600 chr7D 91.262 412 30 5 317 725 54198107 54198515 8.370000e-155 556.0
38 TraesCS4D01G030600 chr2D 91.220 410 30 6 317 723 637586301 637586707 1.080000e-153 553.0
39 TraesCS4D01G030600 chr2D 93.204 206 9 5 1708 1910 610329856 610329653 5.600000e-77 298.0
40 TraesCS4D01G030600 chr3D 91.315 403 31 3 326 726 475257066 475256666 5.030000e-152 547.0
41 TraesCS4D01G030600 chr1D 90.557 413 33 4 317 726 491107555 491107146 2.340000e-150 542.0
42 TraesCS4D01G030600 chr6B 90.488 410 36 3 317 723 495348984 495349393 3.030000e-149 538.0
43 TraesCS4D01G030600 chr5A 90.686 408 32 5 317 721 26817648 26818052 3.030000e-149 538.0
44 TraesCS4D01G030600 chr2B 96.373 193 7 0 1705 1897 377538813 377539005 4.300000e-83 318.0
45 TraesCS4D01G030600 chr2B 92.488 213 10 6 1708 1917 701671326 701671535 1.560000e-77 300.0
46 TraesCS4D01G030600 chr2B 92.019 213 11 6 1708 1917 343396977 343397186 7.240000e-76 294.0
47 TraesCS4D01G030600 chr6D 94.388 196 8 3 1708 1902 468312460 468312653 5.600000e-77 298.0
48 TraesCS4D01G030600 chr1B 93.204 206 9 5 1708 1910 174407504 174407301 5.600000e-77 298.0
49 TraesCS4D01G030600 chr5B 80.556 144 12 11 11 150 615008295 615008426 2.190000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G030600 chr4D 14432725 14435399 2674 True 4940.000000 4940 100.000000 1 2675 1 chr4D.!!$R1 2674
1 TraesCS4D01G030600 chr4D 14909121 14910098 977 False 1291.000000 1291 90.433000 726 1715 1 chr4D.!!$F5 989
2 TraesCS4D01G030600 chr4D 14914366 14915978 1612 False 1091.000000 1371 90.788500 732 2534 2 chr4D.!!$F7 1802
3 TraesCS4D01G030600 chr4D 14857704 14864154 6450 False 1030.333333 1284 88.504667 732 2506 3 chr4D.!!$F6 1774
4 TraesCS4D01G030600 chr4D 14458435 14460005 1570 True 823.500000 1332 88.257500 732 2514 2 chr4D.!!$R3 1782
5 TraesCS4D01G030600 chr4D 14896157 14896773 616 False 741.000000 741 88.622000 1903 2514 1 chr4D.!!$F4 611
6 TraesCS4D01G030600 chr4D 14852047 14852700 653 False 710.000000 710 86.626000 1892 2533 1 chr4D.!!$F3 641
7 TraesCS4D01G030600 chr4D 14838380 14839410 1030 True 507.500000 891 84.505000 779 2028 2 chr4D.!!$R4 1249
8 TraesCS4D01G030600 chr4D 14473930 14474490 560 False 385.000000 385 79.825000 1891 2436 1 chr4D.!!$F1 545
9 TraesCS4D01G030600 chr4B 24733012 24733986 974 False 1158.000000 1158 88.088000 724 1717 1 chr4B.!!$F1 993
10 TraesCS4D01G030600 chr4B 24741401 24747254 5853 False 1066.666667 1162 88.134333 724 2653 3 chr4B.!!$F2 1929
11 TraesCS4D01G030600 chr4B 24759072 24760782 1710 False 744.000000 1363 91.704000 192 2519 3 chr4B.!!$F3 2327
12 TraesCS4D01G030600 chr4A 456449271 456450174 903 True 1232.000000 1232 91.247000 789 1699 1 chr4A.!!$R3 910
13 TraesCS4D01G030600 chr4A 586681261 586682024 763 True 850.000000 850 87.084000 1891 2653 1 chr4A.!!$R4 762
14 TraesCS4D01G030600 chr4A 586698620 586699190 570 True 616.000000 616 86.609000 1891 2448 1 chr4A.!!$R5 557
15 TraesCS4D01G030600 chr3B 452715470 452717200 1730 True 1010.500000 1164 87.717500 724 2653 2 chr3B.!!$R1 1929

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
171 172 0.107214 CTCTGGGCGCCATTTCCTTA 60.107 55.0 30.85 2.96 30.82 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1804 10093 0.394938 ATACAACCCACGTCAGCACA 59.605 50.0 0.0 0.0 0.0 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
71 72 4.840005 GCGGCGGGAGGAGGAAAG 62.840 72.222 9.78 0.00 0.00 2.62
73 74 3.798511 GGCGGGAGGAGGAAAGGG 61.799 72.222 0.00 0.00 0.00 3.95
75 76 2.736826 GCGGGAGGAGGAAAGGGAG 61.737 68.421 0.00 0.00 0.00 4.30
76 77 2.066999 CGGGAGGAGGAAAGGGAGG 61.067 68.421 0.00 0.00 0.00 4.30
78 79 2.736826 GGAGGAGGAAAGGGAGGCG 61.737 68.421 0.00 0.00 0.00 5.52
79 80 2.689034 AGGAGGAAAGGGAGGCGG 60.689 66.667 0.00 0.00 0.00 6.13
80 81 3.798511 GGAGGAAAGGGAGGCGGG 61.799 72.222 0.00 0.00 0.00 6.13
100 101 4.232878 CGAGGGCCTGGCTGCTAG 62.233 72.222 12.95 5.98 0.00 3.42
101 102 3.871395 GAGGGCCTGGCTGCTAGG 61.871 72.222 25.93 25.93 38.39 3.02
104 105 3.174265 GGCCTGGCTGCTAGGGAT 61.174 66.667 29.87 0.00 35.80 3.85
105 106 2.761465 GGCCTGGCTGCTAGGGATT 61.761 63.158 29.87 0.00 35.80 3.01
106 107 1.228094 GCCTGGCTGCTAGGGATTC 60.228 63.158 29.87 12.21 35.80 2.52
108 109 1.453669 CTGGCTGCTAGGGATTCCC 59.546 63.158 14.42 14.42 45.90 3.97
150 151 2.104921 GGGAGGGGGAGGGGAGATA 61.105 68.421 0.00 0.00 0.00 1.98
151 152 1.471999 GGAGGGGGAGGGGAGATAG 59.528 68.421 0.00 0.00 0.00 2.08
152 153 1.229368 GAGGGGGAGGGGAGATAGC 60.229 68.421 0.00 0.00 0.00 2.97
153 154 1.710709 AGGGGGAGGGGAGATAGCT 60.711 63.158 0.00 0.00 0.00 3.32
155 156 1.745879 GGGGGAGGGGAGATAGCTCT 61.746 65.000 8.10 0.00 41.06 4.09
156 157 0.544120 GGGGAGGGGAGATAGCTCTG 60.544 65.000 8.10 0.00 41.06 3.35
157 158 0.544120 GGGAGGGGAGATAGCTCTGG 60.544 65.000 8.10 0.00 41.06 3.86
158 159 0.544120 GGAGGGGAGATAGCTCTGGG 60.544 65.000 8.10 0.00 41.06 4.45
159 160 1.152139 AGGGGAGATAGCTCTGGGC 60.152 63.158 8.10 0.00 41.06 5.36
168 169 3.521796 GCTCTGGGCGCCATTTCC 61.522 66.667 30.85 11.16 30.82 3.13
169 170 2.273449 CTCTGGGCGCCATTTCCT 59.727 61.111 30.85 0.00 30.82 3.36
170 171 1.379044 CTCTGGGCGCCATTTCCTT 60.379 57.895 30.85 0.00 30.82 3.36
171 172 0.107214 CTCTGGGCGCCATTTCCTTA 60.107 55.000 30.85 2.96 30.82 2.69
172 173 0.107214 TCTGGGCGCCATTTCCTTAG 60.107 55.000 30.85 12.15 30.82 2.18
174 175 1.752694 GGGCGCCATTTCCTTAGCA 60.753 57.895 30.85 0.00 0.00 3.49
175 176 1.728490 GGGCGCCATTTCCTTAGCAG 61.728 60.000 30.85 0.00 0.00 4.24
176 177 1.032114 GGCGCCATTTCCTTAGCAGT 61.032 55.000 24.80 0.00 0.00 4.40
177 178 0.378610 GCGCCATTTCCTTAGCAGTC 59.621 55.000 0.00 0.00 0.00 3.51
178 179 0.652592 CGCCATTTCCTTAGCAGTCG 59.347 55.000 0.00 0.00 0.00 4.18
179 180 1.017387 GCCATTTCCTTAGCAGTCGG 58.983 55.000 0.00 0.00 0.00 4.79
180 181 1.017387 CCATTTCCTTAGCAGTCGGC 58.983 55.000 0.00 0.00 45.30 5.54
195 196 2.202987 GGCGGTGGCTCTGAGATG 60.203 66.667 9.28 0.00 39.81 2.90
218 219 2.251818 CCTCCTCCTTGTCTCTGTTCA 58.748 52.381 0.00 0.00 0.00 3.18
223 224 2.746362 CTCCTTGTCTCTGTTCATTGGC 59.254 50.000 0.00 0.00 0.00 4.52
239 240 0.411452 TGGCCCCATTTCCTTAGCAA 59.589 50.000 0.00 0.00 0.00 3.91
271 272 0.676466 TTGACTATGGCCTTGCACGG 60.676 55.000 4.51 4.51 0.00 4.94
272 273 1.078426 GACTATGGCCTTGCACGGT 60.078 57.895 11.38 0.00 0.00 4.83
273 274 0.676782 GACTATGGCCTTGCACGGTT 60.677 55.000 11.38 0.00 0.00 4.44
274 275 0.960364 ACTATGGCCTTGCACGGTTG 60.960 55.000 11.38 0.00 0.00 3.77
284 285 4.079446 CACGGTTGCACCCATCTT 57.921 55.556 0.00 0.00 33.75 2.40
293 294 4.322953 GGTTGCACCCATCTTCATTTTCAT 60.323 41.667 0.00 0.00 30.04 2.57
295 296 4.823157 TGCACCCATCTTCATTTTCATTG 58.177 39.130 0.00 0.00 0.00 2.82
306 307 4.484236 TCATTTTCATTGCAAGTTAGGCG 58.516 39.130 4.94 0.00 0.00 5.52
307 308 4.217334 TCATTTTCATTGCAAGTTAGGCGA 59.783 37.500 4.94 0.00 0.00 5.54
311 312 3.198068 TCATTGCAAGTTAGGCGATCTC 58.802 45.455 4.94 0.00 33.09 2.75
312 313 1.640428 TTGCAAGTTAGGCGATCTCG 58.360 50.000 0.00 0.00 43.27 4.04
313 314 0.815095 TGCAAGTTAGGCGATCTCGA 59.185 50.000 3.33 0.00 43.02 4.04
330 331 4.295119 ACGGAGTGCGGCGTTTCT 62.295 61.111 9.37 4.45 42.51 2.52
331 332 3.777925 CGGAGTGCGGCGTTTCTG 61.778 66.667 9.37 5.33 0.00 3.02
341 342 4.394712 CGTTTCTGCTCCCGGGCT 62.395 66.667 18.49 0.00 0.00 5.19
342 343 2.436824 GTTTCTGCTCCCGGGCTC 60.437 66.667 18.49 10.53 0.00 4.70
343 344 2.927856 TTTCTGCTCCCGGGCTCA 60.928 61.111 18.49 15.04 0.00 4.26
344 345 2.525124 TTTCTGCTCCCGGGCTCAA 61.525 57.895 18.49 0.00 0.00 3.02
345 346 2.748058 TTTCTGCTCCCGGGCTCAAC 62.748 60.000 18.49 3.09 0.00 3.18
346 347 3.710722 CTGCTCCCGGGCTCAACT 61.711 66.667 18.49 0.00 0.00 3.16
349 350 2.656069 GCTCCCGGGCTCAACTACA 61.656 63.158 18.49 0.00 0.00 2.74
350 351 1.218316 CTCCCGGGCTCAACTACAC 59.782 63.158 18.49 0.00 0.00 2.90
351 352 2.240162 CTCCCGGGCTCAACTACACC 62.240 65.000 18.49 0.00 0.00 4.16
355 356 2.813908 GGCTCAACTACACCCGCG 60.814 66.667 0.00 0.00 0.00 6.46
357 358 2.261671 CTCAACTACACCCGCGCT 59.738 61.111 5.56 0.00 0.00 5.92
358 359 2.048597 TCAACTACACCCGCGCTG 60.049 61.111 5.56 0.00 0.00 5.18
359 360 2.048597 CAACTACACCCGCGCTGA 60.049 61.111 5.56 0.00 0.00 4.26
360 361 1.447838 CAACTACACCCGCGCTGAT 60.448 57.895 5.56 0.00 0.00 2.90
361 362 1.447838 AACTACACCCGCGCTGATG 60.448 57.895 5.56 0.00 0.00 3.07
363 364 1.153647 CTACACCCGCGCTGATGAA 60.154 57.895 5.56 0.00 0.00 2.57
364 365 0.739462 CTACACCCGCGCTGATGAAA 60.739 55.000 5.56 0.00 0.00 2.69
365 366 0.320858 TACACCCGCGCTGATGAAAA 60.321 50.000 5.56 0.00 0.00 2.29
368 369 1.169661 ACCCGCGCTGATGAAAACAA 61.170 50.000 5.56 0.00 0.00 2.83
369 370 0.171007 CCCGCGCTGATGAAAACAAT 59.829 50.000 5.56 0.00 0.00 2.71
370 371 1.538276 CCGCGCTGATGAAAACAATC 58.462 50.000 5.56 0.00 0.00 2.67
371 372 1.135717 CCGCGCTGATGAAAACAATCA 60.136 47.619 5.56 0.00 33.13 2.57
372 373 2.583739 CGCGCTGATGAAAACAATCAA 58.416 42.857 5.56 0.00 33.76 2.57
373 374 2.979151 CGCGCTGATGAAAACAATCAAA 59.021 40.909 5.56 0.00 33.76 2.69
374 375 3.058520 CGCGCTGATGAAAACAATCAAAG 59.941 43.478 5.56 0.00 33.76 2.77
375 376 3.983344 GCGCTGATGAAAACAATCAAAGT 59.017 39.130 0.00 0.00 33.76 2.66
376 377 5.153513 GCGCTGATGAAAACAATCAAAGTA 58.846 37.500 0.00 0.00 33.76 2.24
377 378 5.629020 GCGCTGATGAAAACAATCAAAGTAA 59.371 36.000 0.00 0.00 33.76 2.24
378 379 6.143758 GCGCTGATGAAAACAATCAAAGTAAA 59.856 34.615 0.00 0.00 33.76 2.01
379 380 7.148755 GCGCTGATGAAAACAATCAAAGTAAAT 60.149 33.333 0.00 0.00 33.76 1.40
380 381 9.340695 CGCTGATGAAAACAATCAAAGTAAATA 57.659 29.630 0.00 0.00 33.76 1.40
420 421 9.513906 AAAAATTCCAATTTTATTGGGTGGTAG 57.486 29.630 16.22 0.00 45.16 3.18
422 423 8.622572 AATTCCAATTTTATTGGGTGGTAGAT 57.377 30.769 16.22 0.99 39.96 1.98
423 424 9.722317 AATTCCAATTTTATTGGGTGGTAGATA 57.278 29.630 16.22 0.00 39.96 1.98
425 426 9.722317 TTCCAATTTTATTGGGTGGTAGATAAT 57.278 29.630 16.22 0.00 39.96 1.28
426 427 9.722317 TCCAATTTTATTGGGTGGTAGATAATT 57.278 29.630 16.22 0.00 39.96 1.40
432 433 6.715347 ATTGGGTGGTAGATAATTTGAAGC 57.285 37.500 0.00 0.00 0.00 3.86
433 434 4.196193 TGGGTGGTAGATAATTTGAAGCG 58.804 43.478 0.00 0.00 0.00 4.68
434 435 4.196971 GGGTGGTAGATAATTTGAAGCGT 58.803 43.478 0.00 0.00 0.00 5.07
435 436 4.035208 GGGTGGTAGATAATTTGAAGCGTG 59.965 45.833 0.00 0.00 0.00 5.34
437 438 5.006746 GGTGGTAGATAATTTGAAGCGTGAG 59.993 44.000 0.00 0.00 0.00 3.51
438 439 5.006746 GTGGTAGATAATTTGAAGCGTGAGG 59.993 44.000 0.00 0.00 0.00 3.86
447 448 2.821685 AGCGTGAGGTTCACTGCA 59.178 55.556 19.79 0.00 44.85 4.41
448 449 1.146041 AGCGTGAGGTTCACTGCAA 59.854 52.632 19.79 0.00 44.85 4.08
449 450 0.463654 AGCGTGAGGTTCACTGCAAA 60.464 50.000 19.79 0.00 44.85 3.68
450 451 0.593128 GCGTGAGGTTCACTGCAAAT 59.407 50.000 15.71 0.00 44.85 2.32
451 452 1.001378 GCGTGAGGTTCACTGCAAATT 60.001 47.619 15.71 0.00 44.85 1.82
453 454 2.290367 CGTGAGGTTCACTGCAAATTCA 59.710 45.455 7.52 0.00 44.85 2.57
454 455 3.243035 CGTGAGGTTCACTGCAAATTCAA 60.243 43.478 7.52 0.00 44.85 2.69
455 456 4.044426 GTGAGGTTCACTGCAAATTCAAC 58.956 43.478 2.08 0.00 43.73 3.18
456 457 3.953612 TGAGGTTCACTGCAAATTCAACT 59.046 39.130 0.00 0.00 0.00 3.16
458 459 3.953612 AGGTTCACTGCAAATTCAACTCA 59.046 39.130 0.00 0.00 0.00 3.41
459 460 4.586001 AGGTTCACTGCAAATTCAACTCAT 59.414 37.500 0.00 0.00 0.00 2.90
460 461 5.069516 AGGTTCACTGCAAATTCAACTCATT 59.930 36.000 0.00 0.00 0.00 2.57
461 462 5.754890 GGTTCACTGCAAATTCAACTCATTT 59.245 36.000 0.00 0.00 0.00 2.32
462 463 6.292488 GGTTCACTGCAAATTCAACTCATTTG 60.292 38.462 1.73 1.73 42.32 2.32
464 465 5.068855 TCACTGCAAATTCAACTCATTTGGA 59.931 36.000 7.34 4.02 40.55 3.53
465 466 5.176223 CACTGCAAATTCAACTCATTTGGAC 59.824 40.000 7.34 0.00 40.55 4.02
466 467 5.163426 ACTGCAAATTCAACTCATTTGGACA 60.163 36.000 7.34 0.00 40.55 4.02
467 468 5.856156 TGCAAATTCAACTCATTTGGACAT 58.144 33.333 7.34 0.00 40.55 3.06
468 469 6.289834 TGCAAATTCAACTCATTTGGACATT 58.710 32.000 7.34 0.00 40.55 2.71
469 470 6.766944 TGCAAATTCAACTCATTTGGACATTT 59.233 30.769 7.34 0.00 40.55 2.32
470 471 7.073265 GCAAATTCAACTCATTTGGACATTTG 58.927 34.615 7.34 0.00 40.55 2.32
471 472 7.041916 GCAAATTCAACTCATTTGGACATTTGA 60.042 33.333 14.67 0.00 40.55 2.69
472 473 8.492748 CAAATTCAACTCATTTGGACATTTGAG 58.507 33.333 9.26 9.26 38.37 3.02
473 474 5.125100 TCAACTCATTTGGACATTTGAGC 57.875 39.130 10.25 0.00 39.33 4.26
474 475 4.583907 TCAACTCATTTGGACATTTGAGCA 59.416 37.500 10.25 0.00 39.33 4.26
475 476 4.778534 ACTCATTTGGACATTTGAGCAG 57.221 40.909 10.25 0.00 39.33 4.24
477 478 3.159472 TCATTTGGACATTTGAGCAGCT 58.841 40.909 0.00 0.00 0.00 4.24
478 479 3.192001 TCATTTGGACATTTGAGCAGCTC 59.808 43.478 16.21 16.21 0.00 4.09
479 480 2.574006 TTGGACATTTGAGCAGCTCT 57.426 45.000 23.15 2.04 0.00 4.09
481 482 1.627329 TGGACATTTGAGCAGCTCTCT 59.373 47.619 23.15 5.13 42.38 3.10
482 483 2.008329 GGACATTTGAGCAGCTCTCTG 58.992 52.381 23.15 17.99 42.38 3.35
509 510 7.654022 AAAAAGACAAAATCAGGGTCTGTAA 57.346 32.000 0.00 0.00 40.80 2.41
510 511 7.654022 AAAAGACAAAATCAGGGTCTGTAAA 57.346 32.000 0.00 0.00 40.80 2.01
511 512 7.654022 AAAGACAAAATCAGGGTCTGTAAAA 57.346 32.000 0.00 0.00 40.80 1.52
512 513 7.654022 AAGACAAAATCAGGGTCTGTAAAAA 57.346 32.000 0.00 0.00 40.80 1.94
531 532 4.957759 AAAAGTTTACTGTTCACGCACT 57.042 36.364 0.00 0.00 0.00 4.40
532 533 3.944422 AAGTTTACTGTTCACGCACTG 57.056 42.857 0.00 0.00 0.00 3.66
533 534 2.901249 AGTTTACTGTTCACGCACTGT 58.099 42.857 0.00 0.00 33.75 3.55
534 535 3.267483 AGTTTACTGTTCACGCACTGTT 58.733 40.909 0.00 0.00 31.81 3.16
535 536 3.687698 AGTTTACTGTTCACGCACTGTTT 59.312 39.130 0.00 0.00 31.81 2.83
536 537 4.155280 AGTTTACTGTTCACGCACTGTTTT 59.845 37.500 0.00 0.00 31.81 2.43
537 538 2.542766 ACTGTTCACGCACTGTTTTG 57.457 45.000 0.00 0.00 0.00 2.44
538 539 2.080693 ACTGTTCACGCACTGTTTTGA 58.919 42.857 0.00 0.00 0.00 2.69
540 541 1.131504 TGTTCACGCACTGTTTTGACC 59.868 47.619 0.00 0.00 0.00 4.02
542 543 1.010125 CACGCACTGTTTTGACCCG 60.010 57.895 0.00 0.00 0.00 5.28
544 545 0.534203 ACGCACTGTTTTGACCCGAT 60.534 50.000 0.00 0.00 0.00 4.18
545 546 0.591170 CGCACTGTTTTGACCCGATT 59.409 50.000 0.00 0.00 0.00 3.34
546 547 1.001815 CGCACTGTTTTGACCCGATTT 60.002 47.619 0.00 0.00 0.00 2.17
547 548 2.393764 GCACTGTTTTGACCCGATTTG 58.606 47.619 0.00 0.00 0.00 2.32
550 551 3.315191 CACTGTTTTGACCCGATTTGTCT 59.685 43.478 0.00 0.00 33.83 3.41
551 552 3.951680 ACTGTTTTGACCCGATTTGTCTT 59.048 39.130 0.00 0.00 33.83 3.01
552 553 5.008217 CACTGTTTTGACCCGATTTGTCTTA 59.992 40.000 0.00 0.00 33.83 2.10
553 554 5.768164 ACTGTTTTGACCCGATTTGTCTTAT 59.232 36.000 0.00 0.00 33.83 1.73
554 555 6.264518 ACTGTTTTGACCCGATTTGTCTTATT 59.735 34.615 0.00 0.00 33.83 1.40
555 556 7.045126 TGTTTTGACCCGATTTGTCTTATTT 57.955 32.000 0.00 0.00 33.83 1.40
556 557 6.920758 TGTTTTGACCCGATTTGTCTTATTTG 59.079 34.615 0.00 0.00 33.83 2.32
557 558 4.695217 TGACCCGATTTGTCTTATTTGC 57.305 40.909 0.00 0.00 33.83 3.68
558 559 3.442273 TGACCCGATTTGTCTTATTTGCC 59.558 43.478 0.00 0.00 33.83 4.52
560 561 2.680841 CCCGATTTGTCTTATTTGCCGA 59.319 45.455 0.00 0.00 0.00 5.54
561 562 3.242739 CCCGATTTGTCTTATTTGCCGAG 60.243 47.826 0.00 0.00 0.00 4.63
563 564 4.260375 CCGATTTGTCTTATTTGCCGAGAG 60.260 45.833 0.00 0.00 0.00 3.20
565 566 3.334583 TTGTCTTATTTGCCGAGAGCT 57.665 42.857 0.00 0.00 44.23 4.09
566 567 2.621338 TGTCTTATTTGCCGAGAGCTG 58.379 47.619 0.00 0.00 44.23 4.24
567 568 1.328986 GTCTTATTTGCCGAGAGCTGC 59.671 52.381 0.00 0.00 44.23 5.25
568 569 1.208052 TCTTATTTGCCGAGAGCTGCT 59.792 47.619 0.00 0.00 44.23 4.24
569 570 1.596727 CTTATTTGCCGAGAGCTGCTC 59.403 52.381 21.72 21.72 44.23 4.26
570 571 0.536724 TATTTGCCGAGAGCTGCTCA 59.463 50.000 29.49 9.13 44.15 4.26
572 573 1.820010 TTTGCCGAGAGCTGCTCAGA 61.820 55.000 29.49 7.15 44.15 3.27
573 574 1.611474 TTGCCGAGAGCTGCTCAGAT 61.611 55.000 29.49 10.97 44.15 2.90
577 578 1.202114 CCGAGAGCTGCTCAGATATCC 59.798 57.143 29.49 9.58 44.15 2.59
578 579 1.885233 CGAGAGCTGCTCAGATATCCA 59.115 52.381 29.49 0.00 44.15 3.41
579 580 2.295629 CGAGAGCTGCTCAGATATCCAA 59.704 50.000 29.49 0.00 44.15 3.53
584 585 4.643463 AGCTGCTCAGATATCCAAATGAG 58.357 43.478 12.97 12.97 41.68 2.90
585 586 4.102838 AGCTGCTCAGATATCCAAATGAGT 59.897 41.667 16.70 0.36 41.00 3.41
586 587 4.820716 GCTGCTCAGATATCCAAATGAGTT 59.179 41.667 16.70 0.00 41.00 3.01
588 589 5.993055 TGCTCAGATATCCAAATGAGTTGA 58.007 37.500 16.70 4.21 41.00 3.18
589 590 6.417258 TGCTCAGATATCCAAATGAGTTGAA 58.583 36.000 16.70 3.54 41.00 2.69
591 592 7.558807 TGCTCAGATATCCAAATGAGTTGAAAT 59.441 33.333 16.70 0.00 41.00 2.17
592 593 8.411683 GCTCAGATATCCAAATGAGTTGAAATT 58.588 33.333 16.70 0.00 41.00 1.82
599 600 5.505165 CAAATGAGTTGAAATTTGGAGCG 57.495 39.130 0.00 0.00 39.87 5.03
601 602 2.857483 TGAGTTGAAATTTGGAGCGGA 58.143 42.857 0.00 0.00 0.00 5.54
602 603 2.552315 TGAGTTGAAATTTGGAGCGGAC 59.448 45.455 0.00 0.00 0.00 4.79
603 604 1.886542 AGTTGAAATTTGGAGCGGACC 59.113 47.619 0.00 0.00 0.00 4.46
604 605 1.886542 GTTGAAATTTGGAGCGGACCT 59.113 47.619 0.00 0.00 0.00 3.85
605 606 1.821216 TGAAATTTGGAGCGGACCTC 58.179 50.000 0.00 0.00 39.98 3.85
606 607 1.073125 TGAAATTTGGAGCGGACCTCA 59.927 47.619 0.00 0.00 42.62 3.86
608 609 0.673644 AATTTGGAGCGGACCTCACG 60.674 55.000 0.00 0.00 42.62 4.35
615 616 4.277239 CGGACCTCACGCATCAAA 57.723 55.556 0.00 0.00 0.00 2.69
616 617 2.767536 CGGACCTCACGCATCAAAT 58.232 52.632 0.00 0.00 0.00 2.32
618 619 2.276201 CGGACCTCACGCATCAAATTA 58.724 47.619 0.00 0.00 0.00 1.40
619 620 2.872245 CGGACCTCACGCATCAAATTAT 59.128 45.455 0.00 0.00 0.00 1.28
620 621 3.059597 CGGACCTCACGCATCAAATTATC 60.060 47.826 0.00 0.00 0.00 1.75
621 622 4.130118 GGACCTCACGCATCAAATTATCT 58.870 43.478 0.00 0.00 0.00 1.98
622 623 5.297547 GGACCTCACGCATCAAATTATCTA 58.702 41.667 0.00 0.00 0.00 1.98
624 625 5.057149 ACCTCACGCATCAAATTATCTACC 58.943 41.667 0.00 0.00 0.00 3.18
625 626 5.056480 CCTCACGCATCAAATTATCTACCA 58.944 41.667 0.00 0.00 0.00 3.25
626 627 5.702670 CCTCACGCATCAAATTATCTACCAT 59.297 40.000 0.00 0.00 0.00 3.55
627 628 6.873605 CCTCACGCATCAAATTATCTACCATA 59.126 38.462 0.00 0.00 0.00 2.74
628 629 7.148573 CCTCACGCATCAAATTATCTACCATAC 60.149 40.741 0.00 0.00 0.00 2.39
630 631 7.713073 TCACGCATCAAATTATCTACCATACAA 59.287 33.333 0.00 0.00 0.00 2.41
633 634 9.729023 CGCATCAAATTATCTACCATACAAAAA 57.271 29.630 0.00 0.00 0.00 1.94
685 686 8.934507 ACTATTTGTTTTGAATTGTTTTCCGA 57.065 26.923 0.00 0.00 0.00 4.55
686 687 8.813282 ACTATTTGTTTTGAATTGTTTTCCGAC 58.187 29.630 0.00 0.00 0.00 4.79
688 689 4.106197 TGTTTTGAATTGTTTTCCGACCG 58.894 39.130 0.00 0.00 0.00 4.79
689 690 3.357166 TTTGAATTGTTTTCCGACCGG 57.643 42.857 0.00 0.00 0.00 5.28
691 692 1.202782 TGAATTGTTTTCCGACCGGGA 60.203 47.619 6.32 0.00 45.40 5.14
698 699 3.147595 TCCGACCGGGAGCAGATG 61.148 66.667 6.32 0.00 40.94 2.90
699 700 3.147595 CCGACCGGGAGCAGATGA 61.148 66.667 6.32 0.00 38.47 2.92
700 701 2.415010 CGACCGGGAGCAGATGAG 59.585 66.667 6.32 0.00 0.00 2.90
703 704 1.000993 ACCGGGAGCAGATGAGTCT 59.999 57.895 6.32 0.00 34.14 3.24
751 4864 8.538409 TCTCGACGCAACTAATATACTATGTA 57.462 34.615 0.00 0.00 0.00 2.29
897 5030 1.203237 ACCTCACCACTCACTCATCCT 60.203 52.381 0.00 0.00 0.00 3.24
1025 5168 1.551883 GTACTCCAAAACCCTAGCGGA 59.448 52.381 4.45 0.00 34.64 5.54
1097 5240 2.000803 TGACCCTCTCCAGGACTTCTA 58.999 52.381 0.00 0.00 43.65 2.10
1156 5299 1.447140 CACACATGCAAGCCCATGC 60.447 57.895 8.91 4.92 44.98 4.06
1248 9528 2.492090 GCTGTGACGGAGCTCGAT 59.508 61.111 7.83 0.00 42.43 3.59
1468 9757 4.812476 CGTTCCTCATCCCGCGCA 62.812 66.667 8.75 0.00 0.00 6.09
1482 9771 3.271014 CGCAGCCTCATGCACTTT 58.729 55.556 0.00 0.00 46.87 2.66
1536 9825 0.756294 TCGTCTCCTTCAACAGCCAA 59.244 50.000 0.00 0.00 0.00 4.52
1551 9840 1.377463 CCAAAACCCCGGCATCGTA 60.377 57.895 0.00 0.00 33.95 3.43
1584 9873 1.682257 GCTCTTCAGCTCCAACCCT 59.318 57.895 0.00 0.00 43.09 4.34
1587 9876 0.178891 TCTTCAGCTCCAACCCTCCT 60.179 55.000 0.00 0.00 0.00 3.69
1590 9879 2.270434 TCAGCTCCAACCCTCCTATT 57.730 50.000 0.00 0.00 0.00 1.73
1734 10023 6.942532 ATTCAACAGTTTTGCTAGAACTCA 57.057 33.333 0.00 0.00 35.26 3.41
1735 10024 6.942532 TTCAACAGTTTTGCTAGAACTCAT 57.057 33.333 0.00 0.00 35.26 2.90
1736 10025 6.545504 TCAACAGTTTTGCTAGAACTCATC 57.454 37.500 0.00 0.00 35.26 2.92
1737 10026 6.291377 TCAACAGTTTTGCTAGAACTCATCT 58.709 36.000 0.00 0.00 42.48 2.90
1738 10027 7.441836 TCAACAGTTTTGCTAGAACTCATCTA 58.558 34.615 0.00 0.00 39.71 1.98
1777 10066 8.806429 TTGTTCTCATTCATCTTTTATAGCCA 57.194 30.769 0.00 0.00 0.00 4.75
1778 10067 8.985315 TGTTCTCATTCATCTTTTATAGCCAT 57.015 30.769 0.00 0.00 0.00 4.40
1779 10068 9.412460 TGTTCTCATTCATCTTTTATAGCCATT 57.588 29.630 0.00 0.00 0.00 3.16
1780 10069 9.674824 GTTCTCATTCATCTTTTATAGCCATTG 57.325 33.333 0.00 0.00 0.00 2.82
1781 10070 8.400184 TCTCATTCATCTTTTATAGCCATTGG 57.600 34.615 0.00 0.00 0.00 3.16
1782 10071 8.219868 TCTCATTCATCTTTTATAGCCATTGGA 58.780 33.333 6.95 0.00 0.00 3.53
1783 10072 8.945195 TCATTCATCTTTTATAGCCATTGGAT 57.055 30.769 6.95 1.78 0.00 3.41
1784 10073 8.799367 TCATTCATCTTTTATAGCCATTGGATG 58.201 33.333 6.95 0.00 0.00 3.51
1785 10074 8.582437 CATTCATCTTTTATAGCCATTGGATGT 58.418 33.333 6.95 0.10 33.39 3.06
1786 10075 7.514784 TCATCTTTTATAGCCATTGGATGTG 57.485 36.000 6.95 0.00 33.39 3.21
1787 10076 7.289310 TCATCTTTTATAGCCATTGGATGTGA 58.711 34.615 6.95 0.00 33.39 3.58
1788 10077 7.946219 TCATCTTTTATAGCCATTGGATGTGAT 59.054 33.333 6.95 0.00 33.39 3.06
1789 10078 7.514784 TCTTTTATAGCCATTGGATGTGATG 57.485 36.000 6.95 0.00 0.00 3.07
1790 10079 5.710513 TTTATAGCCATTGGATGTGATGC 57.289 39.130 6.95 0.00 0.00 3.91
1791 10080 3.520691 ATAGCCATTGGATGTGATGCT 57.479 42.857 6.95 0.00 0.00 3.79
1792 10081 4.645863 ATAGCCATTGGATGTGATGCTA 57.354 40.909 6.95 0.00 0.00 3.49
1793 10082 3.520691 AGCCATTGGATGTGATGCTAT 57.479 42.857 6.95 0.00 0.00 2.97
1794 10083 4.645863 AGCCATTGGATGTGATGCTATA 57.354 40.909 6.95 0.00 0.00 1.31
1795 10084 4.989277 AGCCATTGGATGTGATGCTATAA 58.011 39.130 6.95 0.00 0.00 0.98
1796 10085 5.008331 AGCCATTGGATGTGATGCTATAAG 58.992 41.667 6.95 0.00 0.00 1.73
1797 10086 5.005740 GCCATTGGATGTGATGCTATAAGA 58.994 41.667 6.95 0.00 0.00 2.10
1798 10087 5.651139 GCCATTGGATGTGATGCTATAAGAT 59.349 40.000 6.95 0.00 0.00 2.40
1799 10088 6.404403 GCCATTGGATGTGATGCTATAAGATG 60.404 42.308 6.95 0.00 0.00 2.90
1800 10089 6.404403 CCATTGGATGTGATGCTATAAGATGC 60.404 42.308 0.00 0.00 0.00 3.91
1801 10090 4.248058 TGGATGTGATGCTATAAGATGCG 58.752 43.478 0.00 0.00 0.00 4.73
1802 10091 4.248859 GGATGTGATGCTATAAGATGCGT 58.751 43.478 0.00 0.00 0.00 5.24
1803 10092 4.092529 GGATGTGATGCTATAAGATGCGTG 59.907 45.833 0.00 0.00 0.00 5.34
1804 10093 4.058721 TGTGATGCTATAAGATGCGTGT 57.941 40.909 0.00 0.00 0.00 4.49
1805 10094 3.803778 TGTGATGCTATAAGATGCGTGTG 59.196 43.478 0.00 0.00 0.00 3.82
1806 10095 3.804325 GTGATGCTATAAGATGCGTGTGT 59.196 43.478 0.00 0.00 0.00 3.72
1807 10096 3.803778 TGATGCTATAAGATGCGTGTGTG 59.196 43.478 0.00 0.00 0.00 3.82
1808 10097 1.933181 TGCTATAAGATGCGTGTGTGC 59.067 47.619 0.00 0.00 0.00 4.57
1809 10098 2.205074 GCTATAAGATGCGTGTGTGCT 58.795 47.619 0.00 0.00 35.36 4.40
1810 10099 2.033407 GCTATAAGATGCGTGTGTGCTG 60.033 50.000 0.00 0.00 35.36 4.41
1811 10100 2.385013 ATAAGATGCGTGTGTGCTGA 57.615 45.000 0.00 0.00 35.36 4.26
1812 10101 1.428448 TAAGATGCGTGTGTGCTGAC 58.572 50.000 0.00 0.00 35.36 3.51
1813 10102 1.560004 AAGATGCGTGTGTGCTGACG 61.560 55.000 0.00 0.00 38.63 4.35
1814 10103 2.280119 ATGCGTGTGTGCTGACGT 60.280 55.556 0.00 0.00 37.89 4.34
1815 10104 2.484631 GATGCGTGTGTGCTGACGTG 62.485 60.000 0.00 0.00 37.89 4.49
1816 10105 4.000557 GCGTGTGTGCTGACGTGG 62.001 66.667 0.00 0.00 37.89 4.94
1817 10106 3.337889 CGTGTGTGCTGACGTGGG 61.338 66.667 0.00 0.00 0.00 4.61
1818 10107 2.203015 GTGTGTGCTGACGTGGGT 60.203 61.111 0.00 0.00 0.00 4.51
1819 10108 1.817941 GTGTGTGCTGACGTGGGTT 60.818 57.895 0.00 0.00 0.00 4.11
1820 10109 1.817520 TGTGTGCTGACGTGGGTTG 60.818 57.895 0.00 0.00 0.00 3.77
1821 10110 1.817941 GTGTGCTGACGTGGGTTGT 60.818 57.895 0.00 0.00 0.00 3.32
1822 10111 0.531090 GTGTGCTGACGTGGGTTGTA 60.531 55.000 0.00 0.00 0.00 2.41
1823 10112 0.394938 TGTGCTGACGTGGGTTGTAT 59.605 50.000 0.00 0.00 0.00 2.29
1824 10113 1.076332 GTGCTGACGTGGGTTGTATC 58.924 55.000 0.00 0.00 0.00 2.24
1825 10114 0.973632 TGCTGACGTGGGTTGTATCT 59.026 50.000 0.00 0.00 0.00 1.98
1826 10115 1.337728 TGCTGACGTGGGTTGTATCTG 60.338 52.381 0.00 0.00 0.00 2.90
1827 10116 1.337823 GCTGACGTGGGTTGTATCTGT 60.338 52.381 0.00 0.00 0.00 3.41
1828 10117 2.870435 GCTGACGTGGGTTGTATCTGTT 60.870 50.000 0.00 0.00 0.00 3.16
1829 10118 2.993899 CTGACGTGGGTTGTATCTGTTC 59.006 50.000 0.00 0.00 0.00 3.18
1830 10119 2.631062 TGACGTGGGTTGTATCTGTTCT 59.369 45.455 0.00 0.00 0.00 3.01
1831 10120 3.070446 TGACGTGGGTTGTATCTGTTCTT 59.930 43.478 0.00 0.00 0.00 2.52
1832 10121 3.399330 ACGTGGGTTGTATCTGTTCTTG 58.601 45.455 0.00 0.00 0.00 3.02
1833 10122 3.181458 ACGTGGGTTGTATCTGTTCTTGT 60.181 43.478 0.00 0.00 0.00 3.16
1834 10123 3.813166 CGTGGGTTGTATCTGTTCTTGTT 59.187 43.478 0.00 0.00 0.00 2.83
1835 10124 4.274950 CGTGGGTTGTATCTGTTCTTGTTT 59.725 41.667 0.00 0.00 0.00 2.83
1836 10125 5.220970 CGTGGGTTGTATCTGTTCTTGTTTT 60.221 40.000 0.00 0.00 0.00 2.43
1837 10126 6.206498 GTGGGTTGTATCTGTTCTTGTTTTC 58.794 40.000 0.00 0.00 0.00 2.29
1838 10127 5.888724 TGGGTTGTATCTGTTCTTGTTTTCA 59.111 36.000 0.00 0.00 0.00 2.69
1839 10128 6.378564 TGGGTTGTATCTGTTCTTGTTTTCAA 59.621 34.615 0.00 0.00 38.21 2.69
1840 10129 7.093727 TGGGTTGTATCTGTTCTTGTTTTCAAA 60.094 33.333 0.00 0.00 39.47 2.69
1841 10130 7.435192 GGGTTGTATCTGTTCTTGTTTTCAAAG 59.565 37.037 0.00 0.00 39.47 2.77
1842 10131 7.973944 GGTTGTATCTGTTCTTGTTTTCAAAGT 59.026 33.333 0.00 0.00 39.47 2.66
1843 10132 8.798153 GTTGTATCTGTTCTTGTTTTCAAAGTG 58.202 33.333 0.00 0.00 39.47 3.16
1844 10133 8.275015 TGTATCTGTTCTTGTTTTCAAAGTGA 57.725 30.769 0.00 0.00 39.47 3.41
1845 10134 8.735315 TGTATCTGTTCTTGTTTTCAAAGTGAA 58.265 29.630 0.00 0.00 39.47 3.18
1846 10135 9.736023 GTATCTGTTCTTGTTTTCAAAGTGAAT 57.264 29.630 0.00 0.00 39.47 2.57
1847 10136 8.638685 ATCTGTTCTTGTTTTCAAAGTGAATG 57.361 30.769 0.00 0.00 39.47 2.67
1848 10137 7.825681 TCTGTTCTTGTTTTCAAAGTGAATGA 58.174 30.769 0.00 0.00 39.47 2.57
1849 10138 7.970061 TCTGTTCTTGTTTTCAAAGTGAATGAG 59.030 33.333 0.00 0.00 39.47 2.90
1850 10139 7.825681 TGTTCTTGTTTTCAAAGTGAATGAGA 58.174 30.769 0.00 0.00 39.47 3.27
1851 10140 7.754924 TGTTCTTGTTTTCAAAGTGAATGAGAC 59.245 33.333 0.00 0.00 39.47 3.36
1852 10141 6.795399 TCTTGTTTTCAAAGTGAATGAGACC 58.205 36.000 0.00 0.00 39.47 3.85
1853 10142 6.376864 TCTTGTTTTCAAAGTGAATGAGACCA 59.623 34.615 0.00 0.00 39.47 4.02
1854 10143 6.522625 TGTTTTCAAAGTGAATGAGACCAA 57.477 33.333 0.00 0.00 36.11 3.67
1855 10144 6.929625 TGTTTTCAAAGTGAATGAGACCAAA 58.070 32.000 0.00 0.00 36.11 3.28
1856 10145 7.555087 TGTTTTCAAAGTGAATGAGACCAAAT 58.445 30.769 0.00 0.00 36.11 2.32
1857 10146 8.040132 TGTTTTCAAAGTGAATGAGACCAAATT 58.960 29.630 0.00 0.00 36.11 1.82
1858 10147 9.528018 GTTTTCAAAGTGAATGAGACCAAATTA 57.472 29.630 0.00 0.00 36.11 1.40
1889 10178 9.344772 TCATCTAAATGAGTTCTAGGTACTCTC 57.655 37.037 19.80 9.23 41.99 3.20
2039 10348 8.383175 CCAATATGGGGAATTGTATGTACTACT 58.617 37.037 0.00 0.00 33.37 2.57
2128 10441 9.239551 GTCCCATTACCTTTTATAAGTCAAACT 57.760 33.333 0.00 0.00 0.00 2.66
2153 10466 4.836125 TCTAAGGTTTACGTCACGACTT 57.164 40.909 2.91 2.76 0.00 3.01
2249 10570 8.597227 CAAAATGTTCCATGTATTGTAGCAATG 58.403 33.333 4.78 0.00 0.00 2.82
2256 10577 6.316140 TCCATGTATTGTAGCAATGTCAAGAC 59.684 38.462 4.78 0.00 35.00 3.01
2305 10635 5.894298 TCTACCATGCACAGAATATCCTT 57.106 39.130 0.00 0.00 0.00 3.36
2319 10657 7.072961 ACAGAATATCCTTTACATGGATCCACT 59.927 37.037 18.99 7.86 42.74 4.00
2333 10671 0.813610 TCCACTGTCCGTTGTTGCTG 60.814 55.000 0.00 0.00 0.00 4.41
2470 10836 5.428783 ACTGCTTAGTTATATGGTGGACCTT 59.571 40.000 0.00 0.00 36.82 3.50
2484 10854 0.678048 GACCTTCATGCTCACCCACC 60.678 60.000 0.00 0.00 0.00 4.61
2521 10891 1.469335 TTCAAGGCGGTTCTCTCGGT 61.469 55.000 0.00 0.00 0.00 4.69
2560 10930 7.819415 TGACATGTTTTCTCTCTATCGATTTGT 59.181 33.333 1.71 0.00 0.00 2.83
2575 10952 3.588955 GATTTGTTGCAATGGGTCTTCC 58.411 45.455 0.59 0.00 0.00 3.46
2608 10985 7.803189 TCAACAAAATCATTAGAGCGTTTCTTC 59.197 33.333 0.00 0.00 37.36 2.87
2610 10987 7.522374 ACAAAATCATTAGAGCGTTTCTTCTC 58.478 34.615 0.00 0.00 37.36 2.87
2654 11031 2.196776 CCATCCCCATGGTCTGCC 59.803 66.667 11.73 0.00 44.46 4.85
2655 11032 2.389449 CCATCCCCATGGTCTGCCT 61.389 63.158 11.73 0.00 44.46 4.75
2656 11033 1.152819 CATCCCCATGGTCTGCCTG 60.153 63.158 11.73 0.00 35.27 4.85
2657 11034 2.389449 ATCCCCATGGTCTGCCTGG 61.389 63.158 11.73 2.53 34.73 4.45
2658 11035 2.863383 ATCCCCATGGTCTGCCTGGA 62.863 60.000 11.73 8.57 36.06 3.86
2659 11036 2.389449 CCCCATGGTCTGCCTGGAT 61.389 63.158 11.73 0.00 36.06 3.41
2660 11037 1.061905 CCCCATGGTCTGCCTGGATA 61.062 60.000 11.73 0.00 36.06 2.59
2661 11038 1.070604 CCCATGGTCTGCCTGGATAT 58.929 55.000 11.73 0.00 36.06 1.63
2662 11039 1.426598 CCCATGGTCTGCCTGGATATT 59.573 52.381 11.73 0.00 36.06 1.28
2663 11040 2.553904 CCCATGGTCTGCCTGGATATTC 60.554 54.545 11.73 0.00 36.06 1.75
2664 11041 2.107031 CCATGGTCTGCCTGGATATTCA 59.893 50.000 2.57 0.00 36.06 2.57
2665 11042 3.435457 CCATGGTCTGCCTGGATATTCAA 60.435 47.826 2.57 0.00 36.06 2.69
2666 11043 4.404640 CATGGTCTGCCTGGATATTCAAT 58.595 43.478 0.00 0.00 35.27 2.57
2667 11044 4.524802 TGGTCTGCCTGGATATTCAATT 57.475 40.909 0.00 0.00 35.27 2.32
2668 11045 4.464008 TGGTCTGCCTGGATATTCAATTC 58.536 43.478 0.00 0.00 35.27 2.17
2669 11046 4.079844 TGGTCTGCCTGGATATTCAATTCA 60.080 41.667 0.00 0.00 35.27 2.57
2670 11047 4.518211 GGTCTGCCTGGATATTCAATTCAG 59.482 45.833 0.00 0.00 0.00 3.02
2671 11048 5.371526 GTCTGCCTGGATATTCAATTCAGA 58.628 41.667 0.00 5.75 0.00 3.27
2672 11049 5.238214 GTCTGCCTGGATATTCAATTCAGAC 59.762 44.000 17.26 17.26 40.37 3.51
2673 11050 4.129380 TGCCTGGATATTCAATTCAGACG 58.871 43.478 0.00 0.00 0.00 4.18
2674 11051 4.130118 GCCTGGATATTCAATTCAGACGT 58.870 43.478 0.00 0.00 0.00 4.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 55 4.840005 CTTTCCTCCTCCCGCCGC 62.840 72.222 0.00 0.00 0.00 6.53
55 56 4.162690 CCTTTCCTCCTCCCGCCG 62.163 72.222 0.00 0.00 0.00 6.46
57 58 2.687566 TCCCTTTCCTCCTCCCGC 60.688 66.667 0.00 0.00 0.00 6.13
58 59 2.066999 CCTCCCTTTCCTCCTCCCG 61.067 68.421 0.00 0.00 0.00 5.14
59 60 2.379459 GCCTCCCTTTCCTCCTCCC 61.379 68.421 0.00 0.00 0.00 4.30
60 61 2.736826 CGCCTCCCTTTCCTCCTCC 61.737 68.421 0.00 0.00 0.00 4.30
61 62 2.736826 CCGCCTCCCTTTCCTCCTC 61.737 68.421 0.00 0.00 0.00 3.71
62 63 2.689034 CCGCCTCCCTTTCCTCCT 60.689 66.667 0.00 0.00 0.00 3.69
63 64 3.798511 CCCGCCTCCCTTTCCTCC 61.799 72.222 0.00 0.00 0.00 4.30
64 65 3.798511 CCCCGCCTCCCTTTCCTC 61.799 72.222 0.00 0.00 0.00 3.71
87 88 2.689035 GAATCCCTAGCAGCCAGGCC 62.689 65.000 8.22 0.00 0.00 5.19
88 89 1.228094 GAATCCCTAGCAGCCAGGC 60.228 63.158 1.84 1.84 0.00 4.85
89 90 1.453669 GGAATCCCTAGCAGCCAGG 59.546 63.158 0.00 0.00 0.00 4.45
90 91 1.453669 GGGAATCCCTAGCAGCCAG 59.546 63.158 11.95 0.00 41.34 4.85
132 133 2.104921 TATCTCCCCTCCCCCTCCC 61.105 68.421 0.00 0.00 0.00 4.30
133 134 1.471999 CTATCTCCCCTCCCCCTCC 59.528 68.421 0.00 0.00 0.00 4.30
134 135 1.229368 GCTATCTCCCCTCCCCCTC 60.229 68.421 0.00 0.00 0.00 4.30
136 137 1.229368 GAGCTATCTCCCCTCCCCC 60.229 68.421 0.00 0.00 33.19 5.40
137 138 0.544120 CAGAGCTATCTCCCCTCCCC 60.544 65.000 0.00 0.00 40.22 4.81
138 139 0.544120 CCAGAGCTATCTCCCCTCCC 60.544 65.000 0.00 0.00 40.22 4.30
139 140 0.544120 CCCAGAGCTATCTCCCCTCC 60.544 65.000 0.00 0.00 40.22 4.30
140 141 1.191489 GCCCAGAGCTATCTCCCCTC 61.191 65.000 0.00 0.00 40.22 4.30
141 142 1.152139 GCCCAGAGCTATCTCCCCT 60.152 63.158 0.00 0.00 40.22 4.79
142 143 2.578714 CGCCCAGAGCTATCTCCCC 61.579 68.421 0.00 0.00 40.22 4.81
143 144 3.055580 CGCCCAGAGCTATCTCCC 58.944 66.667 0.00 0.00 40.22 4.30
144 145 2.341911 GCGCCCAGAGCTATCTCC 59.658 66.667 0.00 0.00 40.22 3.71
145 146 1.825281 ATGGCGCCCAGAGCTATCTC 61.825 60.000 26.77 0.00 36.75 2.75
146 147 1.414061 AATGGCGCCCAGAGCTATCT 61.414 55.000 26.77 0.00 36.75 1.98
147 148 0.536006 AAATGGCGCCCAGAGCTATC 60.536 55.000 26.77 0.00 36.75 2.08
150 151 2.439156 GAAATGGCGCCCAGAGCT 60.439 61.111 26.77 1.52 36.75 4.09
151 152 3.521796 GGAAATGGCGCCCAGAGC 61.522 66.667 26.77 9.50 36.75 4.09
152 153 0.107214 TAAGGAAATGGCGCCCAGAG 60.107 55.000 26.77 0.00 36.75 3.35
153 154 0.107214 CTAAGGAAATGGCGCCCAGA 60.107 55.000 26.77 5.45 36.75 3.86
155 156 1.752694 GCTAAGGAAATGGCGCCCA 60.753 57.895 26.77 12.96 38.19 5.36
156 157 1.728490 CTGCTAAGGAAATGGCGCCC 61.728 60.000 26.77 8.13 0.00 6.13
157 158 1.032114 ACTGCTAAGGAAATGGCGCC 61.032 55.000 22.73 22.73 0.00 6.53
158 159 0.378610 GACTGCTAAGGAAATGGCGC 59.621 55.000 0.00 0.00 0.00 6.53
159 160 0.652592 CGACTGCTAAGGAAATGGCG 59.347 55.000 0.00 0.00 0.00 5.69
160 161 1.017387 CCGACTGCTAAGGAAATGGC 58.983 55.000 0.00 0.00 0.00 4.40
161 162 1.017387 GCCGACTGCTAAGGAAATGG 58.983 55.000 0.00 0.00 36.87 3.16
163 164 0.462047 CCGCCGACTGCTAAGGAAAT 60.462 55.000 0.00 0.00 38.05 2.17
166 167 2.678934 ACCGCCGACTGCTAAGGA 60.679 61.111 0.00 0.00 38.05 3.36
168 169 2.509336 CCACCGCCGACTGCTAAG 60.509 66.667 0.00 0.00 38.05 2.18
169 170 4.752879 GCCACCGCCGACTGCTAA 62.753 66.667 0.00 0.00 38.05 3.09
175 176 4.803426 CTCAGAGCCACCGCCGAC 62.803 72.222 0.00 0.00 34.57 4.79
177 178 3.842923 ATCTCAGAGCCACCGCCG 61.843 66.667 0.00 0.00 34.57 6.46
178 179 2.202987 CATCTCAGAGCCACCGCC 60.203 66.667 0.00 0.00 34.57 6.13
179 180 2.894387 GCATCTCAGAGCCACCGC 60.894 66.667 0.00 0.00 0.00 5.68
180 181 1.812922 GTGCATCTCAGAGCCACCG 60.813 63.158 0.00 0.00 0.00 4.94
181 182 1.451028 GGTGCATCTCAGAGCCACC 60.451 63.158 14.94 14.94 0.00 4.61
182 183 0.461693 GAGGTGCATCTCAGAGCCAC 60.462 60.000 22.32 0.00 34.13 5.01
183 184 1.620739 GGAGGTGCATCTCAGAGCCA 61.621 60.000 27.65 0.00 35.58 4.75
184 185 1.145819 GGAGGTGCATCTCAGAGCC 59.854 63.158 27.65 7.63 35.58 4.70
185 186 0.104671 GAGGAGGTGCATCTCAGAGC 59.895 60.000 27.65 10.86 35.58 4.09
190 191 0.908198 ACAAGGAGGAGGTGCATCTC 59.092 55.000 19.20 19.20 0.00 2.75
195 196 0.248843 CAGAGACAAGGAGGAGGTGC 59.751 60.000 0.00 0.00 0.00 5.01
218 219 1.008206 TGCTAAGGAAATGGGGCCAAT 59.992 47.619 4.39 0.00 0.00 3.16
223 224 1.102978 CGGTTGCTAAGGAAATGGGG 58.897 55.000 0.00 0.00 0.00 4.96
271 272 4.255833 TGAAAATGAAGATGGGTGCAAC 57.744 40.909 0.00 0.00 0.00 4.17
272 273 5.239351 CAATGAAAATGAAGATGGGTGCAA 58.761 37.500 0.00 0.00 0.00 4.08
273 274 4.823157 CAATGAAAATGAAGATGGGTGCA 58.177 39.130 0.00 0.00 0.00 4.57
274 275 3.619929 GCAATGAAAATGAAGATGGGTGC 59.380 43.478 0.00 0.00 0.00 5.01
275 276 4.823157 TGCAATGAAAATGAAGATGGGTG 58.177 39.130 0.00 0.00 0.00 4.61
276 277 5.012354 ACTTGCAATGAAAATGAAGATGGGT 59.988 36.000 0.00 0.00 0.00 4.51
278 279 7.277098 CCTAACTTGCAATGAAAATGAAGATGG 59.723 37.037 0.00 0.00 0.00 3.51
279 280 7.201496 GCCTAACTTGCAATGAAAATGAAGATG 60.201 37.037 0.00 0.00 0.00 2.90
280 281 6.815142 GCCTAACTTGCAATGAAAATGAAGAT 59.185 34.615 0.00 0.00 0.00 2.40
281 282 6.158598 GCCTAACTTGCAATGAAAATGAAGA 58.841 36.000 0.00 0.00 0.00 2.87
283 284 4.922692 CGCCTAACTTGCAATGAAAATGAA 59.077 37.500 0.00 0.00 0.00 2.57
284 285 4.217334 TCGCCTAACTTGCAATGAAAATGA 59.783 37.500 0.00 0.00 0.00 2.57
293 294 1.203758 TCGAGATCGCCTAACTTGCAA 59.796 47.619 0.00 0.00 39.60 4.08
295 296 1.201343 GTCGAGATCGCCTAACTTGC 58.799 55.000 0.00 0.00 39.60 4.01
306 307 2.024871 CCGCACTCCGTCGAGATC 59.975 66.667 0.00 0.00 38.52 2.75
307 308 4.194720 GCCGCACTCCGTCGAGAT 62.195 66.667 0.00 0.00 38.52 2.75
312 313 3.774702 GAAACGCCGCACTCCGTC 61.775 66.667 0.00 0.00 36.56 4.79
313 314 4.295119 AGAAACGCCGCACTCCGT 62.295 61.111 0.00 0.00 39.70 4.69
314 315 3.777925 CAGAAACGCCGCACTCCG 61.778 66.667 0.00 0.00 0.00 4.63
315 316 4.090057 GCAGAAACGCCGCACTCC 62.090 66.667 0.00 0.00 0.00 3.85
317 318 3.044305 GAGCAGAAACGCCGCACT 61.044 61.111 0.00 0.00 0.00 4.40
318 319 4.090057 GGAGCAGAAACGCCGCAC 62.090 66.667 0.00 0.00 0.00 5.34
326 327 2.525124 TTGAGCCCGGGAGCAGAAA 61.525 57.895 29.31 5.99 34.23 2.52
327 328 2.927856 TTGAGCCCGGGAGCAGAA 60.928 61.111 29.31 5.64 34.23 3.02
328 329 2.798445 TAGTTGAGCCCGGGAGCAGA 62.798 60.000 29.31 9.03 34.23 4.26
329 330 2.359169 TAGTTGAGCCCGGGAGCAG 61.359 63.158 29.31 0.00 34.23 4.24
330 331 2.284331 TAGTTGAGCCCGGGAGCA 60.284 61.111 29.31 18.94 34.23 4.26
331 332 2.187163 GTAGTTGAGCCCGGGAGC 59.813 66.667 29.31 16.09 0.00 4.70
332 333 1.218316 GTGTAGTTGAGCCCGGGAG 59.782 63.158 29.31 0.00 0.00 4.30
333 334 2.288025 GGTGTAGTTGAGCCCGGGA 61.288 63.158 29.31 0.00 0.00 5.14
334 335 2.267961 GGTGTAGTTGAGCCCGGG 59.732 66.667 19.09 19.09 0.00 5.73
337 338 2.436115 GCGGGTGTAGTTGAGCCC 60.436 66.667 0.00 0.00 37.79 5.19
338 339 2.813908 CGCGGGTGTAGTTGAGCC 60.814 66.667 0.00 0.00 0.00 4.70
339 340 3.488090 GCGCGGGTGTAGTTGAGC 61.488 66.667 8.83 0.00 0.00 4.26
340 341 2.094659 CAGCGCGGGTGTAGTTGAG 61.095 63.158 8.83 0.00 0.00 3.02
341 342 1.884075 ATCAGCGCGGGTGTAGTTGA 61.884 55.000 8.83 0.00 32.43 3.18
342 343 1.447838 ATCAGCGCGGGTGTAGTTG 60.448 57.895 8.83 0.00 32.43 3.16
343 344 1.447838 CATCAGCGCGGGTGTAGTT 60.448 57.895 13.01 0.00 32.43 2.24
344 345 1.884075 TTCATCAGCGCGGGTGTAGT 61.884 55.000 20.23 0.00 32.43 2.73
345 346 0.739462 TTTCATCAGCGCGGGTGTAG 60.739 55.000 20.23 0.00 32.43 2.74
346 347 0.320858 TTTTCATCAGCGCGGGTGTA 60.321 50.000 20.23 8.45 32.43 2.90
349 350 1.169661 TTGTTTTCATCAGCGCGGGT 61.170 50.000 8.83 0.00 0.00 5.28
350 351 0.171007 ATTGTTTTCATCAGCGCGGG 59.829 50.000 8.83 1.03 0.00 6.13
351 352 1.135717 TGATTGTTTTCATCAGCGCGG 60.136 47.619 8.83 0.00 0.00 6.46
353 354 3.983344 ACTTTGATTGTTTTCATCAGCGC 59.017 39.130 0.00 0.00 0.00 5.92
394 395 9.513906 CTACCACCCAATAAAATTGGAATTTTT 57.486 29.630 18.18 0.00 43.91 1.94
395 396 8.885346 TCTACCACCCAATAAAATTGGAATTTT 58.115 29.630 18.18 13.22 46.85 1.82
396 397 8.442660 TCTACCACCCAATAAAATTGGAATTT 57.557 30.769 18.18 4.71 42.06 1.82
397 398 8.622572 ATCTACCACCCAATAAAATTGGAATT 57.377 30.769 18.18 1.88 42.06 2.17
398 399 9.722317 TTATCTACCACCCAATAAAATTGGAAT 57.278 29.630 18.18 5.20 42.06 3.01
399 400 9.722317 ATTATCTACCACCCAATAAAATTGGAA 57.278 29.630 18.18 3.83 42.06 3.53
406 407 8.691797 GCTTCAAATTATCTACCACCCAATAAA 58.308 33.333 0.00 0.00 0.00 1.40
408 409 6.485313 CGCTTCAAATTATCTACCACCCAATA 59.515 38.462 0.00 0.00 0.00 1.90
409 410 5.299279 CGCTTCAAATTATCTACCACCCAAT 59.701 40.000 0.00 0.00 0.00 3.16
410 411 4.638421 CGCTTCAAATTATCTACCACCCAA 59.362 41.667 0.00 0.00 0.00 4.12
411 412 4.196193 CGCTTCAAATTATCTACCACCCA 58.804 43.478 0.00 0.00 0.00 4.51
412 413 4.035208 CACGCTTCAAATTATCTACCACCC 59.965 45.833 0.00 0.00 0.00 4.61
413 414 4.873827 TCACGCTTCAAATTATCTACCACC 59.126 41.667 0.00 0.00 0.00 4.61
415 416 5.116180 CCTCACGCTTCAAATTATCTACCA 58.884 41.667 0.00 0.00 0.00 3.25
416 417 5.116882 ACCTCACGCTTCAAATTATCTACC 58.883 41.667 0.00 0.00 0.00 3.18
417 418 6.312918 TGAACCTCACGCTTCAAATTATCTAC 59.687 38.462 0.00 0.00 0.00 2.59
418 419 6.312918 GTGAACCTCACGCTTCAAATTATCTA 59.687 38.462 0.00 0.00 37.67 1.98
419 420 5.122396 GTGAACCTCACGCTTCAAATTATCT 59.878 40.000 0.00 0.00 37.67 1.98
420 421 5.324697 GTGAACCTCACGCTTCAAATTATC 58.675 41.667 0.00 0.00 37.67 1.75
422 423 4.742438 GTGAACCTCACGCTTCAAATTA 57.258 40.909 0.00 0.00 37.67 1.40
423 424 3.626028 GTGAACCTCACGCTTCAAATT 57.374 42.857 0.00 0.00 37.67 1.82
434 435 3.953612 AGTTGAATTTGCAGTGAACCTCA 59.046 39.130 0.00 0.00 0.00 3.86
435 436 4.036734 TGAGTTGAATTTGCAGTGAACCTC 59.963 41.667 0.00 0.00 0.00 3.85
437 438 4.305989 TGAGTTGAATTTGCAGTGAACC 57.694 40.909 0.00 0.00 0.00 3.62
438 439 6.292488 CCAAATGAGTTGAATTTGCAGTGAAC 60.292 38.462 0.00 0.00 41.58 3.18
439 440 5.754406 CCAAATGAGTTGAATTTGCAGTGAA 59.246 36.000 0.00 0.00 41.58 3.18
440 441 5.068855 TCCAAATGAGTTGAATTTGCAGTGA 59.931 36.000 0.00 0.00 41.58 3.41
442 443 5.163426 TGTCCAAATGAGTTGAATTTGCAGT 60.163 36.000 0.00 0.00 41.58 4.40
444 445 5.273674 TGTCCAAATGAGTTGAATTTGCA 57.726 34.783 0.00 0.00 41.58 4.08
447 448 7.172019 GCTCAAATGTCCAAATGAGTTGAATTT 59.828 33.333 0.00 0.00 41.03 1.82
448 449 6.647895 GCTCAAATGTCCAAATGAGTTGAATT 59.352 34.615 0.00 0.00 41.03 2.17
449 450 6.161381 GCTCAAATGTCCAAATGAGTTGAAT 58.839 36.000 0.00 0.00 41.03 2.57
450 451 5.068855 TGCTCAAATGTCCAAATGAGTTGAA 59.931 36.000 0.00 0.00 41.03 2.69
451 452 4.583907 TGCTCAAATGTCCAAATGAGTTGA 59.416 37.500 0.00 0.00 41.03 3.18
453 454 4.560108 GCTGCTCAAATGTCCAAATGAGTT 60.560 41.667 11.79 0.00 41.03 3.01
454 455 3.057033 GCTGCTCAAATGTCCAAATGAGT 60.057 43.478 11.79 0.00 41.03 3.41
455 456 3.192844 AGCTGCTCAAATGTCCAAATGAG 59.807 43.478 0.00 7.82 41.69 2.90
456 457 3.159472 AGCTGCTCAAATGTCCAAATGA 58.841 40.909 0.00 0.00 0.00 2.57
458 459 3.428532 AGAGCTGCTCAAATGTCCAAAT 58.571 40.909 29.49 3.19 32.06 2.32
459 460 2.816087 GAGAGCTGCTCAAATGTCCAAA 59.184 45.455 29.49 0.00 43.38 3.28
460 461 2.039480 AGAGAGCTGCTCAAATGTCCAA 59.961 45.455 29.49 0.00 46.45 3.53
461 462 1.627329 AGAGAGCTGCTCAAATGTCCA 59.373 47.619 29.49 0.00 46.45 4.02
462 463 2.008329 CAGAGAGCTGCTCAAATGTCC 58.992 52.381 29.49 10.38 46.45 4.02
486 487 7.654022 TTTACAGACCCTGATTTTGTCTTTT 57.346 32.000 0.45 0.00 37.25 2.27
488 489 7.654022 TTTTTACAGACCCTGATTTTGTCTT 57.346 32.000 0.45 0.00 37.25 3.01
509 510 5.092781 CAGTGCGTGAACAGTAAACTTTTT 58.907 37.500 0.00 0.00 0.00 1.94
510 511 4.155280 ACAGTGCGTGAACAGTAAACTTTT 59.845 37.500 0.00 0.00 0.00 2.27
511 512 3.687698 ACAGTGCGTGAACAGTAAACTTT 59.312 39.130 0.00 0.00 0.00 2.66
512 513 3.267483 ACAGTGCGTGAACAGTAAACTT 58.733 40.909 0.00 0.00 0.00 2.66
513 514 2.901249 ACAGTGCGTGAACAGTAAACT 58.099 42.857 0.00 0.00 0.00 2.66
515 516 4.154375 TCAAAACAGTGCGTGAACAGTAAA 59.846 37.500 0.00 0.00 0.00 2.01
516 517 3.685272 TCAAAACAGTGCGTGAACAGTAA 59.315 39.130 0.00 0.00 0.00 2.24
518 519 2.080693 TCAAAACAGTGCGTGAACAGT 58.919 42.857 0.00 0.00 0.00 3.55
519 520 2.440501 GTCAAAACAGTGCGTGAACAG 58.559 47.619 0.00 0.00 0.00 3.16
520 521 1.131504 GGTCAAAACAGTGCGTGAACA 59.868 47.619 2.35 0.00 0.00 3.18
521 522 1.533129 GGGTCAAAACAGTGCGTGAAC 60.533 52.381 0.00 0.00 0.00 3.18
522 523 0.736053 GGGTCAAAACAGTGCGTGAA 59.264 50.000 0.00 0.00 0.00 3.18
523 524 1.433053 CGGGTCAAAACAGTGCGTGA 61.433 55.000 0.00 0.00 0.00 4.35
525 526 0.534203 ATCGGGTCAAAACAGTGCGT 60.534 50.000 0.00 0.00 0.00 5.24
526 527 0.591170 AATCGGGTCAAAACAGTGCG 59.409 50.000 0.00 0.00 0.00 5.34
528 529 3.315191 AGACAAATCGGGTCAAAACAGTG 59.685 43.478 0.00 0.00 37.74 3.66
529 530 3.551846 AGACAAATCGGGTCAAAACAGT 58.448 40.909 0.00 0.00 37.74 3.55
530 531 4.568152 AAGACAAATCGGGTCAAAACAG 57.432 40.909 0.00 0.00 37.74 3.16
531 532 6.642707 AATAAGACAAATCGGGTCAAAACA 57.357 33.333 0.00 0.00 37.74 2.83
532 533 6.128929 GCAAATAAGACAAATCGGGTCAAAAC 60.129 38.462 0.00 0.00 37.74 2.43
533 534 5.923684 GCAAATAAGACAAATCGGGTCAAAA 59.076 36.000 0.00 0.00 37.74 2.44
534 535 5.465935 GCAAATAAGACAAATCGGGTCAAA 58.534 37.500 0.00 0.00 37.74 2.69
535 536 4.082463 GGCAAATAAGACAAATCGGGTCAA 60.082 41.667 0.00 0.00 37.74 3.18
536 537 3.442273 GGCAAATAAGACAAATCGGGTCA 59.558 43.478 0.00 0.00 37.74 4.02
537 538 3.486875 CGGCAAATAAGACAAATCGGGTC 60.487 47.826 0.00 0.00 35.50 4.46
538 539 2.422127 CGGCAAATAAGACAAATCGGGT 59.578 45.455 0.00 0.00 0.00 5.28
540 541 3.621268 TCTCGGCAAATAAGACAAATCGG 59.379 43.478 0.00 0.00 0.00 4.18
542 543 4.333926 AGCTCTCGGCAAATAAGACAAATC 59.666 41.667 0.00 0.00 44.79 2.17
544 545 3.436704 CAGCTCTCGGCAAATAAGACAAA 59.563 43.478 0.00 0.00 44.79 2.83
545 546 3.002791 CAGCTCTCGGCAAATAAGACAA 58.997 45.455 0.00 0.00 44.79 3.18
546 547 2.621338 CAGCTCTCGGCAAATAAGACA 58.379 47.619 0.00 0.00 44.79 3.41
547 548 1.328986 GCAGCTCTCGGCAAATAAGAC 59.671 52.381 0.00 0.00 44.79 3.01
550 551 1.066215 TGAGCAGCTCTCGGCAAATAA 60.066 47.619 23.15 0.00 44.86 1.40
551 552 0.536724 TGAGCAGCTCTCGGCAAATA 59.463 50.000 23.15 0.00 44.86 1.40
552 553 0.743701 CTGAGCAGCTCTCGGCAAAT 60.744 55.000 23.15 0.00 44.86 2.32
553 554 1.375140 CTGAGCAGCTCTCGGCAAA 60.375 57.895 23.15 0.00 44.86 3.68
554 555 1.611474 ATCTGAGCAGCTCTCGGCAA 61.611 55.000 23.15 0.68 45.76 4.52
555 556 0.753111 TATCTGAGCAGCTCTCGGCA 60.753 55.000 23.15 2.15 45.76 5.69
556 557 0.602562 ATATCTGAGCAGCTCTCGGC 59.397 55.000 23.15 0.00 45.76 5.54
558 559 1.885233 TGGATATCTGAGCAGCTCTCG 59.115 52.381 23.15 13.93 44.86 4.04
560 561 4.347292 TCATTTGGATATCTGAGCAGCTCT 59.653 41.667 23.15 5.93 0.00 4.09
561 562 4.639334 TCATTTGGATATCTGAGCAGCTC 58.361 43.478 16.21 16.21 0.00 4.09
563 564 4.387598 ACTCATTTGGATATCTGAGCAGC 58.612 43.478 15.91 0.00 38.94 5.25
565 566 5.993055 TCAACTCATTTGGATATCTGAGCA 58.007 37.500 15.91 0.00 38.94 4.26
566 567 6.932356 TTCAACTCATTTGGATATCTGAGC 57.068 37.500 15.91 0.00 38.94 4.26
577 578 4.386652 CCGCTCCAAATTTCAACTCATTTG 59.613 41.667 0.00 0.00 39.25 2.32
578 579 4.280677 TCCGCTCCAAATTTCAACTCATTT 59.719 37.500 0.00 0.00 0.00 2.32
579 580 3.826157 TCCGCTCCAAATTTCAACTCATT 59.174 39.130 0.00 0.00 0.00 2.57
584 585 1.886542 AGGTCCGCTCCAAATTTCAAC 59.113 47.619 0.00 0.00 0.00 3.18
585 586 2.159382 GAGGTCCGCTCCAAATTTCAA 58.841 47.619 0.00 0.00 0.00 2.69
586 587 1.073125 TGAGGTCCGCTCCAAATTTCA 59.927 47.619 0.00 0.00 0.00 2.69
588 589 1.534729 GTGAGGTCCGCTCCAAATTT 58.465 50.000 0.00 0.00 0.00 1.82
589 590 0.673644 CGTGAGGTCCGCTCCAAATT 60.674 55.000 0.00 0.00 0.00 1.82
591 592 2.342279 CGTGAGGTCCGCTCCAAA 59.658 61.111 0.00 0.00 0.00 3.28
598 599 1.086696 AATTTGATGCGTGAGGTCCG 58.913 50.000 0.00 0.00 0.00 4.79
599 600 4.130118 AGATAATTTGATGCGTGAGGTCC 58.870 43.478 0.00 0.00 0.00 4.46
601 602 5.057149 GGTAGATAATTTGATGCGTGAGGT 58.943 41.667 0.00 0.00 0.00 3.85
602 603 5.056480 TGGTAGATAATTTGATGCGTGAGG 58.944 41.667 0.00 0.00 0.00 3.86
603 604 6.791887 ATGGTAGATAATTTGATGCGTGAG 57.208 37.500 0.00 0.00 0.00 3.51
604 605 7.213678 TGTATGGTAGATAATTTGATGCGTGA 58.786 34.615 0.00 0.00 0.00 4.35
605 606 7.420184 TGTATGGTAGATAATTTGATGCGTG 57.580 36.000 0.00 0.00 0.00 5.34
606 607 8.445275 TTTGTATGGTAGATAATTTGATGCGT 57.555 30.769 0.00 0.00 0.00 5.24
661 662 8.272866 GGTCGGAAAACAATTCAAAACAAATAG 58.727 33.333 0.00 0.00 0.00 1.73
662 663 7.043325 CGGTCGGAAAACAATTCAAAACAAATA 60.043 33.333 0.00 0.00 0.00 1.40
663 664 6.237969 CGGTCGGAAAACAATTCAAAACAAAT 60.238 34.615 0.00 0.00 0.00 2.32
664 665 5.062308 CGGTCGGAAAACAATTCAAAACAAA 59.938 36.000 0.00 0.00 0.00 2.83
665 666 4.563184 CGGTCGGAAAACAATTCAAAACAA 59.437 37.500 0.00 0.00 0.00 2.83
666 667 4.106197 CGGTCGGAAAACAATTCAAAACA 58.894 39.130 0.00 0.00 0.00 2.83
667 668 3.487942 CCGGTCGGAAAACAATTCAAAAC 59.512 43.478 2.83 0.00 37.50 2.43
669 670 2.034812 CCCGGTCGGAAAACAATTCAAA 59.965 45.455 11.39 0.00 37.50 2.69
670 671 1.609555 CCCGGTCGGAAAACAATTCAA 59.390 47.619 11.39 0.00 37.50 2.69
672 673 1.467342 CTCCCGGTCGGAAAACAATTC 59.533 52.381 11.39 0.00 41.40 2.17
674 675 0.958876 GCTCCCGGTCGGAAAACAAT 60.959 55.000 11.39 0.00 41.40 2.71
675 676 1.598685 GCTCCCGGTCGGAAAACAA 60.599 57.895 11.39 0.00 41.40 2.83
676 677 2.031465 GCTCCCGGTCGGAAAACA 59.969 61.111 11.39 0.00 41.40 2.83
677 678 2.031465 TGCTCCCGGTCGGAAAAC 59.969 61.111 11.39 0.00 41.40 2.43
678 679 1.550130 ATCTGCTCCCGGTCGGAAAA 61.550 55.000 11.39 0.00 41.40 2.29
679 680 1.987855 ATCTGCTCCCGGTCGGAAA 60.988 57.895 11.39 0.00 41.40 3.13
680 681 2.363795 ATCTGCTCCCGGTCGGAA 60.364 61.111 11.39 0.00 41.40 4.30
681 682 3.147595 CATCTGCTCCCGGTCGGA 61.148 66.667 11.39 0.00 38.83 4.55
682 683 3.144120 CTCATCTGCTCCCGGTCGG 62.144 68.421 0.00 1.86 0.00 4.79
683 684 2.343163 GACTCATCTGCTCCCGGTCG 62.343 65.000 0.00 0.00 0.00 4.79
684 685 1.040339 AGACTCATCTGCTCCCGGTC 61.040 60.000 0.00 0.00 32.29 4.79
685 686 1.000993 AGACTCATCTGCTCCCGGT 59.999 57.895 0.00 0.00 32.29 5.28
686 687 1.440893 CAGACTCATCTGCTCCCGG 59.559 63.158 0.00 0.00 45.83 5.73
694 695 0.689080 ATCGGTGCCCAGACTCATCT 60.689 55.000 0.00 0.00 34.57 2.90
695 696 0.179000 AATCGGTGCCCAGACTCATC 59.821 55.000 0.00 0.00 0.00 2.92
696 697 0.620556 AAATCGGTGCCCAGACTCAT 59.379 50.000 0.00 0.00 0.00 2.90
697 698 0.321564 CAAATCGGTGCCCAGACTCA 60.322 55.000 0.00 0.00 0.00 3.41
698 699 1.026718 CCAAATCGGTGCCCAGACTC 61.027 60.000 0.00 0.00 0.00 3.36
699 700 1.002134 CCAAATCGGTGCCCAGACT 60.002 57.895 0.00 0.00 0.00 3.24
700 701 0.394352 ATCCAAATCGGTGCCCAGAC 60.394 55.000 0.00 0.00 35.57 3.51
703 704 1.638529 AAAATCCAAATCGGTGCCCA 58.361 45.000 0.00 0.00 35.57 5.36
704 705 2.028567 TCAAAAATCCAAATCGGTGCCC 60.029 45.455 0.00 0.00 35.57 5.36
705 706 3.311486 TCAAAAATCCAAATCGGTGCC 57.689 42.857 0.00 0.00 35.57 5.01
707 708 5.030295 CGAGATCAAAAATCCAAATCGGTG 58.970 41.667 0.00 0.00 35.57 4.94
708 709 4.941263 TCGAGATCAAAAATCCAAATCGGT 59.059 37.500 0.00 0.00 35.57 4.69
709 710 5.266242 GTCGAGATCAAAAATCCAAATCGG 58.734 41.667 0.00 0.00 0.00 4.18
710 711 4.957967 CGTCGAGATCAAAAATCCAAATCG 59.042 41.667 0.00 0.00 0.00 3.34
713 714 3.500299 TGCGTCGAGATCAAAAATCCAAA 59.500 39.130 0.00 0.00 0.00 3.28
714 715 3.070748 TGCGTCGAGATCAAAAATCCAA 58.929 40.909 0.00 0.00 0.00 3.53
715 716 2.694213 TGCGTCGAGATCAAAAATCCA 58.306 42.857 0.00 0.00 0.00 3.41
716 717 3.125316 AGTTGCGTCGAGATCAAAAATCC 59.875 43.478 0.00 0.00 0.00 3.01
717 718 4.327854 AGTTGCGTCGAGATCAAAAATC 57.672 40.909 0.00 0.00 0.00 2.17
718 719 5.856126 TTAGTTGCGTCGAGATCAAAAAT 57.144 34.783 0.00 0.00 0.00 1.82
719 720 5.856126 ATTAGTTGCGTCGAGATCAAAAA 57.144 34.783 0.00 0.00 0.00 1.94
720 721 7.919091 AGTATATTAGTTGCGTCGAGATCAAAA 59.081 33.333 0.00 0.00 0.00 2.44
721 722 7.423199 AGTATATTAGTTGCGTCGAGATCAAA 58.577 34.615 0.00 0.00 0.00 2.69
722 723 6.967135 AGTATATTAGTTGCGTCGAGATCAA 58.033 36.000 0.00 0.00 0.00 2.57
751 4864 3.997021 CACACGAGGCAGAGAGTTATTTT 59.003 43.478 0.00 0.00 0.00 1.82
758 4871 0.387878 GACACACACGAGGCAGAGAG 60.388 60.000 0.00 0.00 0.00 3.20
877 5010 1.203237 AGGATGAGTGAGTGGTGAGGT 60.203 52.381 0.00 0.00 0.00 3.85
897 5030 1.339055 GCTAAGCTGTGGTGGATGACA 60.339 52.381 0.00 0.00 0.00 3.58
1362 9643 2.235898 GAGGAGCTCACCTTTCATCACT 59.764 50.000 17.19 0.00 40.73 3.41
1482 9771 2.287788 GGTCTTACCGACGTTGAACTGA 60.288 50.000 3.74 0.00 43.79 3.41
1509 9798 3.830178 TGTTGAAGGAGACGACCATAGAA 59.170 43.478 0.00 0.00 0.00 2.10
1512 9801 2.094182 GCTGTTGAAGGAGACGACCATA 60.094 50.000 0.00 0.00 0.00 2.74
1536 9825 1.099689 CAAATACGATGCCGGGGTTT 58.900 50.000 2.18 0.00 40.78 3.27
1751 10040 9.241919 TGGCTATAAAAGATGAATGAGAACAAA 57.758 29.630 0.00 0.00 0.00 2.83
1752 10041 8.806429 TGGCTATAAAAGATGAATGAGAACAA 57.194 30.769 0.00 0.00 0.00 2.83
1753 10042 8.985315 ATGGCTATAAAAGATGAATGAGAACA 57.015 30.769 0.00 0.00 0.00 3.18
1754 10043 9.674824 CAATGGCTATAAAAGATGAATGAGAAC 57.325 33.333 0.00 0.00 0.00 3.01
1755 10044 8.853126 CCAATGGCTATAAAAGATGAATGAGAA 58.147 33.333 0.00 0.00 0.00 2.87
1756 10045 8.219868 TCCAATGGCTATAAAAGATGAATGAGA 58.780 33.333 0.00 0.00 0.00 3.27
1757 10046 8.400184 TCCAATGGCTATAAAAGATGAATGAG 57.600 34.615 0.00 0.00 0.00 2.90
1758 10047 8.799367 CATCCAATGGCTATAAAAGATGAATGA 58.201 33.333 0.00 0.00 33.35 2.57
1759 10048 8.582437 ACATCCAATGGCTATAAAAGATGAATG 58.418 33.333 14.33 0.00 35.13 2.67
1760 10049 8.582437 CACATCCAATGGCTATAAAAGATGAAT 58.418 33.333 14.33 0.00 35.13 2.57
1761 10050 7.779326 TCACATCCAATGGCTATAAAAGATGAA 59.221 33.333 14.33 4.30 35.13 2.57
1762 10051 7.289310 TCACATCCAATGGCTATAAAAGATGA 58.711 34.615 14.33 1.03 35.13 2.92
1763 10052 7.514784 TCACATCCAATGGCTATAAAAGATG 57.485 36.000 0.00 8.84 36.73 2.90
1764 10053 7.309621 GCATCACATCCAATGGCTATAAAAGAT 60.310 37.037 0.00 0.00 33.60 2.40
1765 10054 6.016024 GCATCACATCCAATGGCTATAAAAGA 60.016 38.462 0.00 0.00 33.60 2.52
1766 10055 6.015688 AGCATCACATCCAATGGCTATAAAAG 60.016 38.462 0.00 0.00 33.60 2.27
1767 10056 5.834742 AGCATCACATCCAATGGCTATAAAA 59.165 36.000 0.00 0.00 33.60 1.52
1768 10057 5.387788 AGCATCACATCCAATGGCTATAAA 58.612 37.500 0.00 0.00 33.60 1.40
1769 10058 4.989277 AGCATCACATCCAATGGCTATAA 58.011 39.130 0.00 0.00 33.60 0.98
1770 10059 4.645863 AGCATCACATCCAATGGCTATA 57.354 40.909 0.00 0.00 33.60 1.31
1771 10060 3.520691 AGCATCACATCCAATGGCTAT 57.479 42.857 0.00 0.00 33.60 2.97
1772 10061 4.645863 ATAGCATCACATCCAATGGCTA 57.354 40.909 0.00 0.00 33.60 3.93
1773 10062 3.520691 ATAGCATCACATCCAATGGCT 57.479 42.857 0.00 0.00 33.60 4.75
1774 10063 5.005740 TCTTATAGCATCACATCCAATGGC 58.994 41.667 0.00 0.00 33.60 4.40
1775 10064 6.404403 GCATCTTATAGCATCACATCCAATGG 60.404 42.308 0.00 0.00 33.60 3.16
1776 10065 6.552629 GCATCTTATAGCATCACATCCAATG 58.447 40.000 0.00 0.00 0.00 2.82
1777 10066 5.353400 CGCATCTTATAGCATCACATCCAAT 59.647 40.000 0.00 0.00 0.00 3.16
1778 10067 4.692155 CGCATCTTATAGCATCACATCCAA 59.308 41.667 0.00 0.00 0.00 3.53
1779 10068 4.248058 CGCATCTTATAGCATCACATCCA 58.752 43.478 0.00 0.00 0.00 3.41
1780 10069 4.092529 CACGCATCTTATAGCATCACATCC 59.907 45.833 0.00 0.00 0.00 3.51
1781 10070 4.687948 ACACGCATCTTATAGCATCACATC 59.312 41.667 0.00 0.00 0.00 3.06
1782 10071 4.450080 CACACGCATCTTATAGCATCACAT 59.550 41.667 0.00 0.00 0.00 3.21
1783 10072 3.803778 CACACGCATCTTATAGCATCACA 59.196 43.478 0.00 0.00 0.00 3.58
1784 10073 3.804325 ACACACGCATCTTATAGCATCAC 59.196 43.478 0.00 0.00 0.00 3.06
1785 10074 3.803778 CACACACGCATCTTATAGCATCA 59.196 43.478 0.00 0.00 0.00 3.07
1786 10075 3.363378 GCACACACGCATCTTATAGCATC 60.363 47.826 0.00 0.00 0.00 3.91
1787 10076 2.545526 GCACACACGCATCTTATAGCAT 59.454 45.455 0.00 0.00 0.00 3.79
1788 10077 1.933181 GCACACACGCATCTTATAGCA 59.067 47.619 0.00 0.00 0.00 3.49
1789 10078 2.033407 CAGCACACACGCATCTTATAGC 60.033 50.000 0.00 0.00 0.00 2.97
1790 10079 3.243877 GTCAGCACACACGCATCTTATAG 59.756 47.826 0.00 0.00 0.00 1.31
1791 10080 3.186909 GTCAGCACACACGCATCTTATA 58.813 45.455 0.00 0.00 0.00 0.98
1792 10081 2.002586 GTCAGCACACACGCATCTTAT 58.997 47.619 0.00 0.00 0.00 1.73
1793 10082 1.428448 GTCAGCACACACGCATCTTA 58.572 50.000 0.00 0.00 0.00 2.10
1794 10083 1.560004 CGTCAGCACACACGCATCTT 61.560 55.000 0.00 0.00 0.00 2.40
1795 10084 2.023771 CGTCAGCACACACGCATCT 61.024 57.895 0.00 0.00 0.00 2.90
1796 10085 2.310233 ACGTCAGCACACACGCATC 61.310 57.895 0.00 0.00 39.73 3.91
1797 10086 2.280119 ACGTCAGCACACACGCAT 60.280 55.556 0.00 0.00 39.73 4.73
1798 10087 3.261216 CACGTCAGCACACACGCA 61.261 61.111 0.00 0.00 39.73 5.24
1799 10088 4.000557 CCACGTCAGCACACACGC 62.001 66.667 0.00 0.00 39.73 5.34
1800 10089 3.337889 CCCACGTCAGCACACACG 61.338 66.667 0.00 0.00 41.90 4.49
1801 10090 1.817941 AACCCACGTCAGCACACAC 60.818 57.895 0.00 0.00 0.00 3.82
1802 10091 1.817520 CAACCCACGTCAGCACACA 60.818 57.895 0.00 0.00 0.00 3.72
1803 10092 0.531090 TACAACCCACGTCAGCACAC 60.531 55.000 0.00 0.00 0.00 3.82
1804 10093 0.394938 ATACAACCCACGTCAGCACA 59.605 50.000 0.00 0.00 0.00 4.57
1805 10094 1.076332 GATACAACCCACGTCAGCAC 58.924 55.000 0.00 0.00 0.00 4.40
1806 10095 0.973632 AGATACAACCCACGTCAGCA 59.026 50.000 0.00 0.00 0.00 4.41
1807 10096 1.337823 ACAGATACAACCCACGTCAGC 60.338 52.381 0.00 0.00 0.00 4.26
1808 10097 2.743636 ACAGATACAACCCACGTCAG 57.256 50.000 0.00 0.00 0.00 3.51
1809 10098 2.631062 AGAACAGATACAACCCACGTCA 59.369 45.455 0.00 0.00 0.00 4.35
1810 10099 3.314541 AGAACAGATACAACCCACGTC 57.685 47.619 0.00 0.00 0.00 4.34
1811 10100 3.181458 ACAAGAACAGATACAACCCACGT 60.181 43.478 0.00 0.00 0.00 4.49
1812 10101 3.399330 ACAAGAACAGATACAACCCACG 58.601 45.455 0.00 0.00 0.00 4.94
1813 10102 5.767816 AAACAAGAACAGATACAACCCAC 57.232 39.130 0.00 0.00 0.00 4.61
1814 10103 5.888724 TGAAAACAAGAACAGATACAACCCA 59.111 36.000 0.00 0.00 0.00 4.51
1815 10104 6.385649 TGAAAACAAGAACAGATACAACCC 57.614 37.500 0.00 0.00 0.00 4.11
1816 10105 7.973944 ACTTTGAAAACAAGAACAGATACAACC 59.026 33.333 0.00 0.00 0.00 3.77
1817 10106 8.798153 CACTTTGAAAACAAGAACAGATACAAC 58.202 33.333 0.00 0.00 0.00 3.32
1818 10107 8.735315 TCACTTTGAAAACAAGAACAGATACAA 58.265 29.630 0.00 0.00 0.00 2.41
1819 10108 8.275015 TCACTTTGAAAACAAGAACAGATACA 57.725 30.769 0.00 0.00 0.00 2.29
1820 10109 9.736023 ATTCACTTTGAAAACAAGAACAGATAC 57.264 29.630 0.00 0.00 40.12 2.24
1821 10110 9.734620 CATTCACTTTGAAAACAAGAACAGATA 57.265 29.630 0.00 0.00 40.12 1.98
1822 10111 8.469200 TCATTCACTTTGAAAACAAGAACAGAT 58.531 29.630 0.00 0.00 40.12 2.90
1823 10112 7.825681 TCATTCACTTTGAAAACAAGAACAGA 58.174 30.769 0.00 0.00 40.12 3.41
1824 10113 7.970061 TCTCATTCACTTTGAAAACAAGAACAG 59.030 33.333 0.00 0.00 40.12 3.16
1825 10114 7.754924 GTCTCATTCACTTTGAAAACAAGAACA 59.245 33.333 0.00 0.00 40.12 3.18
1826 10115 7.220875 GGTCTCATTCACTTTGAAAACAAGAAC 59.779 37.037 0.00 0.00 40.12 3.01
1827 10116 7.093988 TGGTCTCATTCACTTTGAAAACAAGAA 60.094 33.333 0.00 0.00 40.12 2.52
1828 10117 6.376864 TGGTCTCATTCACTTTGAAAACAAGA 59.623 34.615 0.00 0.00 40.12 3.02
1829 10118 6.563422 TGGTCTCATTCACTTTGAAAACAAG 58.437 36.000 0.00 0.00 40.12 3.16
1830 10119 6.522625 TGGTCTCATTCACTTTGAAAACAA 57.477 33.333 0.00 0.00 40.12 2.83
1831 10120 6.522625 TTGGTCTCATTCACTTTGAAAACA 57.477 33.333 0.00 0.00 40.12 2.83
1832 10121 8.424274 AATTTGGTCTCATTCACTTTGAAAAC 57.576 30.769 0.00 0.00 40.12 2.43
1863 10152 9.344772 GAGAGTACCTAGAACTCATTTAGATGA 57.655 37.037 20.64 0.00 44.77 2.92
1864 10153 9.126151 TGAGAGTACCTAGAACTCATTTAGATG 57.874 37.037 20.64 0.00 44.77 2.90
1865 10154 9.875708 ATGAGAGTACCTAGAACTCATTTAGAT 57.124 33.333 20.64 4.96 44.77 1.98
1871 10160 9.647918 TGAATTATGAGAGTACCTAGAACTCAT 57.352 33.333 20.64 17.83 44.77 2.90
1872 10161 9.475620 TTGAATTATGAGAGTACCTAGAACTCA 57.524 33.333 20.64 13.73 44.77 3.41
1884 10173 9.682465 AGCATGCATATATTGAATTATGAGAGT 57.318 29.630 21.98 0.00 0.00 3.24
1887 10176 9.880064 GCTAGCATGCATATATTGAATTATGAG 57.120 33.333 21.98 0.00 0.00 2.90
1888 10177 9.398538 TGCTAGCATGCATATATTGAATTATGA 57.601 29.630 21.98 0.00 38.12 2.15
2128 10441 4.739716 GTCGTGACGTAAACCTTAGAACAA 59.260 41.667 4.40 0.00 0.00 2.83
2137 10450 2.410730 CCATGAAGTCGTGACGTAAACC 59.589 50.000 4.40 0.00 34.90 3.27
2153 10466 3.333029 TTTCGAGATTGCTCACCATGA 57.667 42.857 0.00 0.00 41.36 3.07
2249 10570 3.502191 TGTTTTTGGCACAGTCTTGAC 57.498 42.857 0.00 0.00 42.39 3.18
2256 10577 3.551454 CCACTCTCATGTTTTTGGCACAG 60.551 47.826 0.00 0.00 42.39 3.66
2305 10635 2.184533 ACGGACAGTGGATCCATGTAA 58.815 47.619 19.62 0.00 35.83 2.41
2319 10657 0.176910 TCTCACAGCAACAACGGACA 59.823 50.000 0.00 0.00 0.00 4.02
2448 10806 5.427157 TGAAGGTCCACCATATAACTAAGCA 59.573 40.000 0.00 0.00 38.89 3.91
2484 10854 2.627221 TGAACAACACAATCACCCCATG 59.373 45.455 0.00 0.00 0.00 3.66
2491 10861 1.336440 CCGCCTTGAACAACACAATCA 59.664 47.619 0.00 0.00 0.00 2.57
2549 10919 4.336433 AGACCCATTGCAACAAATCGATAG 59.664 41.667 0.00 0.00 0.00 2.08
2553 10923 3.244976 GAAGACCCATTGCAACAAATCG 58.755 45.455 0.00 0.00 0.00 3.34
2560 10930 1.133513 ACACTGGAAGACCCATTGCAA 60.134 47.619 0.00 0.00 46.27 4.08
2575 10952 7.020010 GCTCTAATGATTTTGTTGAGACACTG 58.980 38.462 0.00 0.00 34.98 3.66
2608 10985 1.472376 GGCTTCTTCAGATCCACGGAG 60.472 57.143 0.00 0.00 0.00 4.63
2610 10987 0.250234 TGGCTTCTTCAGATCCACGG 59.750 55.000 0.00 0.00 0.00 4.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.