Multiple sequence alignment - TraesCS4D01G029400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G029400 chr4D 100.000 4627 0 0 1 4627 13060350 13055724 0.000000e+00 8545.0
1 TraesCS4D01G029400 chr4D 98.990 198 2 0 4388 4585 13046693 13046496 5.690000e-94 355.0
2 TraesCS4D01G029400 chr4D 91.255 263 19 4 4366 4627 333000825 333001084 5.690000e-94 355.0
3 TraesCS4D01G029400 chr4B 88.669 1518 113 30 2499 3987 23663028 23661541 0.000000e+00 1796.0
4 TraesCS4D01G029400 chr4B 83.851 1963 142 80 101 1990 23665341 23663481 0.000000e+00 1707.0
5 TraesCS4D01G029400 chr4B 92.875 407 19 7 3988 4387 23661454 23661051 2.400000e-162 582.0
6 TraesCS4D01G029400 chr4B 87.726 277 15 5 2224 2500 23663344 23663087 5.820000e-79 305.0
7 TraesCS4D01G029400 chr4B 82.963 135 17 6 2562 2693 510827793 510827662 2.930000e-22 117.0
8 TraesCS4D01G029400 chr4A 86.424 1348 67 48 767 2069 589501937 589500661 0.000000e+00 1369.0
9 TraesCS4D01G029400 chr4A 90.815 871 47 15 2856 3722 589500079 589499238 0.000000e+00 1134.0
10 TraesCS4D01G029400 chr4A 85.025 394 38 14 310 692 589502712 589502329 9.390000e-102 381.0
11 TraesCS4D01G029400 chr4A 84.577 402 23 15 2102 2493 589500656 589500284 3.400000e-96 363.0
12 TraesCS4D01G029400 chr4A 89.020 255 18 6 3880 4130 589499052 589498804 1.620000e-79 307.0
13 TraesCS4D01G029400 chr4A 89.669 242 20 3 4388 4627 511033831 511033593 2.090000e-78 303.0
14 TraesCS4D01G029400 chr4A 93.970 199 8 3 4123 4318 589498644 589498447 9.730000e-77 298.0
15 TraesCS4D01G029400 chr4A 90.370 135 12 1 97 230 589503072 589502938 4.760000e-40 176.0
16 TraesCS4D01G029400 chr4A 92.473 93 5 2 1 92 588805098 588805189 1.040000e-26 132.0
17 TraesCS4D01G029400 chr4A 98.529 68 1 0 4320 4387 589498177 589498110 2.260000e-23 121.0
18 TraesCS4D01G029400 chr4A 98.039 51 1 0 243 293 589502814 589502764 6.380000e-14 89.8
19 TraesCS4D01G029400 chr7B 87.978 366 35 4 1238 1603 731101458 731101814 1.540000e-114 424.0
20 TraesCS4D01G029400 chr7B 84.167 120 15 4 2560 2678 59069228 59069344 3.780000e-21 113.0
21 TraesCS4D01G029400 chr7B 79.562 137 19 2 1863 1990 686539582 686539718 6.380000e-14 89.8
22 TraesCS4D01G029400 chr7B 79.562 137 19 2 1863 1990 731102080 731102216 6.380000e-14 89.8
23 TraesCS4D01G029400 chr7A 86.757 370 39 4 1235 1603 725162045 725162405 2.000000e-108 403.0
24 TraesCS4D01G029400 chr7A 89.837 246 19 5 4384 4627 511696955 511696714 1.250000e-80 311.0
25 TraesCS4D01G029400 chr7A 81.793 357 47 9 1247 1603 725212643 725212305 2.730000e-72 283.0
26 TraesCS4D01G029400 chr7A 95.402 87 4 0 1 87 689536008 689536094 6.240000e-29 139.0
27 TraesCS4D01G029400 chr7A 92.473 93 5 2 1 92 140895066 140895157 1.040000e-26 132.0
28 TraesCS4D01G029400 chr7A 92.473 93 5 2 1 92 141469330 141469421 1.040000e-26 132.0
29 TraesCS4D01G029400 chr7A 92.473 93 5 2 1 92 141761717 141761808 1.040000e-26 132.0
30 TraesCS4D01G029400 chr7D 86.096 374 41 5 1230 1603 629098557 629098195 4.340000e-105 392.0
31 TraesCS4D01G029400 chr7D 90.000 240 21 1 4388 4627 231339108 231339344 1.620000e-79 307.0
32 TraesCS4D01G029400 chr7D 80.697 373 67 5 3011 3381 629295924 629296293 7.580000e-73 285.0
33 TraesCS4D01G029400 chr7D 92.308 91 7 0 1 91 166205279 166205189 3.760000e-26 130.0
34 TraesCS4D01G029400 chr7D 83.453 139 13 9 2562 2695 509615290 509615423 2.260000e-23 121.0
35 TraesCS4D01G029400 chr6B 93.496 246 15 1 4383 4627 704533394 704533149 9.460000e-97 364.0
36 TraesCS4D01G029400 chr6B 80.255 157 24 5 2542 2695 449452054 449452206 1.360000e-20 111.0
37 TraesCS4D01G029400 chr3D 92.917 240 16 1 4388 4627 498719393 498719155 9.530000e-92 348.0
38 TraesCS4D01G029400 chr3D 94.313 211 12 0 4417 4627 446213814 446213604 1.610000e-84 324.0
39 TraesCS4D01G029400 chr5B 78.967 542 85 18 3011 3545 5054032 5053513 4.430000e-90 342.0
40 TraesCS4D01G029400 chr5B 79.328 387 76 4 1219 1603 5055725 5055341 7.630000e-68 268.0
41 TraesCS4D01G029400 chr3A 89.754 244 17 5 4388 4627 747675256 747675495 5.820000e-79 305.0
42 TraesCS4D01G029400 chr3A 95.238 84 4 0 1 84 136643740 136643657 2.900000e-27 134.0
43 TraesCS4D01G029400 chr3A 81.132 159 22 7 2545 2699 178133372 178133526 2.260000e-23 121.0
44 TraesCS4D01G029400 chr5D 79.947 379 75 1 1225 1603 3568889 3568512 1.270000e-70 278.0
45 TraesCS4D01G029400 chr5D 94.186 86 5 0 1 86 296966220 296966305 1.040000e-26 132.0
46 TraesCS4D01G029400 chr5A 79.016 386 79 2 1219 1603 2412301 2411917 3.550000e-66 263.0
47 TraesCS4D01G029400 chr1A 83.544 158 21 5 2541 2695 516787041 516787196 4.830000e-30 143.0
48 TraesCS4D01G029400 chr1A 94.444 36 1 1 1952 1987 219385124 219385090 2.000000e-03 54.7
49 TraesCS4D01G029400 chr1A 94.444 36 1 1 1952 1987 219385759 219385725 2.000000e-03 54.7
50 TraesCS4D01G029400 chr1D 90.566 106 10 0 2541 2646 420554438 420554543 1.740000e-29 141.0
51 TraesCS4D01G029400 chr1D 94.444 36 1 1 1952 1987 188344035 188344069 2.000000e-03 54.7
52 TraesCS4D01G029400 chr2D 95.238 84 4 0 1 84 409529420 409529503 2.900000e-27 134.0
53 TraesCS4D01G029400 chr6D 84.426 122 14 4 2577 2695 296196886 296197005 1.050000e-21 115.0
54 TraesCS4D01G029400 chr6D 80.690 145 22 5 2535 2678 355103842 355103981 1.760000e-19 108.0
55 TraesCS4D01G029400 chr6D 95.833 48 2 0 4327 4374 10461063 10461016 1.380000e-10 78.7
56 TraesCS4D01G029400 chr3B 85.526 76 9 2 4300 4374 309877432 309877506 1.380000e-10 78.7
57 TraesCS4D01G029400 chr2A 87.143 70 7 2 4306 4374 445990225 445990293 1.380000e-10 78.7
58 TraesCS4D01G029400 chr1B 94.444 36 1 1 1952 1987 262532223 262532257 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G029400 chr4D 13055724 13060350 4626 True 8545.000000 8545 100.000000 1 4627 1 chr4D.!!$R2 4626
1 TraesCS4D01G029400 chr4B 23661051 23665341 4290 True 1097.500000 1796 88.280250 101 4387 4 chr4B.!!$R2 4286
2 TraesCS4D01G029400 chr4A 589498110 589503072 4962 True 470.977778 1369 90.752111 97 4387 9 chr4A.!!$R2 4290
3 TraesCS4D01G029400 chr7B 731101458 731102216 758 False 256.900000 424 83.770000 1238 1990 2 chr7B.!!$F3 752
4 TraesCS4D01G029400 chr5B 5053513 5055725 2212 True 305.000000 342 79.147500 1219 3545 2 chr5B.!!$R1 2326

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
885 1406 0.103208 CTTCGTCATCCCTCCCTTCG 59.897 60.0 0.0 0.0 0.0 3.79 F
1693 2325 0.040425 AGATTTTTGTCGTGCGTGCC 60.040 50.0 0.0 0.0 0.0 5.01 F
2213 2883 0.178831 ATCCCTGACCTTGTCCCCTT 60.179 55.0 0.0 0.0 0.0 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1851 2506 0.179004 AACCTGCCAACGATCACCAA 60.179 50.0 0.00 0.0 0.00 3.67 R
2812 3612 2.035961 GCCATCTAGATGTTCTGCCGTA 59.964 50.0 27.03 0.0 37.11 4.02 R
3862 4983 0.182299 CCAGGCTCTCCAATTCCTCC 59.818 60.0 0.00 0.0 33.74 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.830651 ACTCCCCACTGTAGAGGTAG 57.169 55.000 6.62 0.00 31.70 3.18
22 23 2.001558 ACTCCCCACTGTAGAGGTAGT 58.998 52.381 6.62 0.00 31.70 2.73
23 24 3.196300 ACTCCCCACTGTAGAGGTAGTA 58.804 50.000 6.62 0.00 31.70 1.82
24 25 3.595138 ACTCCCCACTGTAGAGGTAGTAA 59.405 47.826 6.62 0.00 31.70 2.24
25 26 3.952967 CTCCCCACTGTAGAGGTAGTAAC 59.047 52.174 0.00 0.00 0.00 2.50
26 27 3.334581 TCCCCACTGTAGAGGTAGTAACA 59.665 47.826 0.00 0.00 0.00 2.41
27 28 4.016851 TCCCCACTGTAGAGGTAGTAACAT 60.017 45.833 0.00 0.00 0.00 2.71
28 29 5.194334 TCCCCACTGTAGAGGTAGTAACATA 59.806 44.000 0.00 0.00 0.00 2.29
29 30 5.535406 CCCCACTGTAGAGGTAGTAACATAG 59.465 48.000 0.00 0.00 0.00 2.23
30 31 6.127793 CCCACTGTAGAGGTAGTAACATAGT 58.872 44.000 0.00 0.00 0.00 2.12
31 32 6.262720 CCCACTGTAGAGGTAGTAACATAGTC 59.737 46.154 0.00 0.00 0.00 2.59
32 33 7.055378 CCACTGTAGAGGTAGTAACATAGTCT 58.945 42.308 0.00 0.00 0.00 3.24
33 34 8.209584 CCACTGTAGAGGTAGTAACATAGTCTA 58.790 40.741 0.00 0.00 0.00 2.59
34 35 9.263538 CACTGTAGAGGTAGTAACATAGTCTAG 57.736 40.741 0.00 0.00 0.00 2.43
35 36 7.933033 ACTGTAGAGGTAGTAACATAGTCTAGC 59.067 40.741 0.00 0.00 33.92 3.42
36 37 7.799081 TGTAGAGGTAGTAACATAGTCTAGCA 58.201 38.462 0.00 0.00 35.48 3.49
37 38 8.270030 TGTAGAGGTAGTAACATAGTCTAGCAA 58.730 37.037 0.00 0.00 35.48 3.91
38 39 7.571080 AGAGGTAGTAACATAGTCTAGCAAC 57.429 40.000 0.00 0.00 35.48 4.17
39 40 7.117397 AGAGGTAGTAACATAGTCTAGCAACA 58.883 38.462 0.00 0.00 35.48 3.33
40 41 7.780745 AGAGGTAGTAACATAGTCTAGCAACAT 59.219 37.037 0.00 0.00 35.48 2.71
41 42 7.717568 AGGTAGTAACATAGTCTAGCAACATG 58.282 38.462 0.00 0.00 35.48 3.21
42 43 6.924060 GGTAGTAACATAGTCTAGCAACATGG 59.076 42.308 0.00 0.00 33.92 3.66
43 44 5.918608 AGTAACATAGTCTAGCAACATGGG 58.081 41.667 0.00 0.00 0.00 4.00
44 45 3.199880 ACATAGTCTAGCAACATGGGC 57.800 47.619 0.00 0.00 0.00 5.36
45 46 2.505407 ACATAGTCTAGCAACATGGGCA 59.495 45.455 13.20 0.50 0.00 5.36
46 47 3.137176 ACATAGTCTAGCAACATGGGCAT 59.863 43.478 13.20 2.67 0.00 4.40
47 48 2.048444 AGTCTAGCAACATGGGCATG 57.952 50.000 13.20 0.00 44.15 4.06
59 60 4.630644 CATGGGCATGTTCCTAGTCTAT 57.369 45.455 8.34 0.00 34.23 1.98
60 61 4.321718 CATGGGCATGTTCCTAGTCTATG 58.678 47.826 8.34 0.00 34.23 2.23
61 62 3.384168 TGGGCATGTTCCTAGTCTATGT 58.616 45.455 8.34 0.00 0.00 2.29
62 63 3.780294 TGGGCATGTTCCTAGTCTATGTT 59.220 43.478 8.34 0.00 0.00 2.71
63 64 4.966168 TGGGCATGTTCCTAGTCTATGTTA 59.034 41.667 8.34 0.00 0.00 2.41
64 65 5.163343 TGGGCATGTTCCTAGTCTATGTTAC 60.163 44.000 8.34 0.00 0.00 2.50
65 66 5.070580 GGGCATGTTCCTAGTCTATGTTACT 59.929 44.000 0.00 0.00 0.00 2.24
66 67 6.267014 GGGCATGTTCCTAGTCTATGTTACTA 59.733 42.308 0.00 0.00 0.00 1.82
67 68 7.038941 GGGCATGTTCCTAGTCTATGTTACTAT 60.039 40.741 0.00 0.00 0.00 2.12
68 69 8.030106 GGCATGTTCCTAGTCTATGTTACTATC 58.970 40.741 0.00 0.00 0.00 2.08
69 70 8.030106 GCATGTTCCTAGTCTATGTTACTATCC 58.970 40.741 0.00 0.00 0.00 2.59
70 71 9.078990 CATGTTCCTAGTCTATGTTACTATCCA 57.921 37.037 0.00 0.00 0.00 3.41
71 72 9.830186 ATGTTCCTAGTCTATGTTACTATCCAT 57.170 33.333 0.00 0.00 0.00 3.41
72 73 9.656323 TGTTCCTAGTCTATGTTACTATCCATT 57.344 33.333 0.00 0.00 0.00 3.16
73 74 9.915629 GTTCCTAGTCTATGTTACTATCCATTG 57.084 37.037 0.00 0.00 0.00 2.82
74 75 9.656323 TTCCTAGTCTATGTTACTATCCATTGT 57.344 33.333 0.00 0.00 0.00 2.71
75 76 9.078990 TCCTAGTCTATGTTACTATCCATTGTG 57.921 37.037 0.00 0.00 0.00 3.33
76 77 8.307483 CCTAGTCTATGTTACTATCCATTGTGG 58.693 40.741 0.00 0.00 39.43 4.17
77 78 6.525629 AGTCTATGTTACTATCCATTGTGGC 58.474 40.000 0.00 0.00 37.47 5.01
78 79 6.327626 AGTCTATGTTACTATCCATTGTGGCT 59.672 38.462 0.00 0.00 37.47 4.75
79 80 7.509318 AGTCTATGTTACTATCCATTGTGGCTA 59.491 37.037 0.00 0.00 37.47 3.93
80 81 7.815068 GTCTATGTTACTATCCATTGTGGCTAG 59.185 40.741 5.55 5.55 40.94 3.42
82 83 5.914033 TGTTACTATCCATTGTGGCTAGTC 58.086 41.667 13.92 4.48 43.73 2.59
83 84 5.661312 TGTTACTATCCATTGTGGCTAGTCT 59.339 40.000 13.92 0.00 43.73 3.24
84 85 6.837048 TGTTACTATCCATTGTGGCTAGTCTA 59.163 38.462 13.92 4.09 43.73 2.59
85 86 7.343574 TGTTACTATCCATTGTGGCTAGTCTAA 59.656 37.037 13.92 4.20 43.73 2.10
86 87 6.412362 ACTATCCATTGTGGCTAGTCTAAG 57.588 41.667 6.67 0.00 43.73 2.18
87 88 6.136857 ACTATCCATTGTGGCTAGTCTAAGA 58.863 40.000 6.67 0.00 43.73 2.10
88 89 4.737855 TCCATTGTGGCTAGTCTAAGAC 57.262 45.455 0.00 0.00 37.47 3.01
89 90 4.093743 TCCATTGTGGCTAGTCTAAGACA 58.906 43.478 0.00 0.00 37.47 3.41
90 91 4.160439 TCCATTGTGGCTAGTCTAAGACAG 59.840 45.833 0.00 0.00 34.35 3.51
91 92 4.081420 CCATTGTGGCTAGTCTAAGACAGT 60.081 45.833 0.00 0.00 34.35 3.55
92 93 5.482908 CATTGTGGCTAGTCTAAGACAGTT 58.517 41.667 0.00 0.00 34.35 3.16
93 94 4.521130 TGTGGCTAGTCTAAGACAGTTG 57.479 45.455 0.00 0.00 34.35 3.16
94 95 3.895656 TGTGGCTAGTCTAAGACAGTTGT 59.104 43.478 0.00 0.00 34.35 3.32
95 96 4.238514 GTGGCTAGTCTAAGACAGTTGTG 58.761 47.826 0.00 0.00 34.35 3.33
99 100 4.218852 GCTAGTCTAAGACAGTTGTGGACT 59.781 45.833 8.08 8.08 39.89 3.85
121 122 2.035704 GTGGTGCCAATGAATGTGTTGA 59.964 45.455 0.00 0.00 0.00 3.18
149 153 0.391263 GGGTCGGCTTTGTCCTAGTG 60.391 60.000 0.00 0.00 0.00 2.74
159 163 3.290948 TTGTCCTAGTGCCAACTTGTT 57.709 42.857 0.00 0.00 37.88 2.83
161 165 2.948979 TGTCCTAGTGCCAACTTGTTTG 59.051 45.455 0.00 0.00 37.88 2.93
162 166 1.953686 TCCTAGTGCCAACTTGTTTGC 59.046 47.619 3.07 3.07 37.88 3.68
163 167 1.334960 CCTAGTGCCAACTTGTTTGCG 60.335 52.381 5.35 0.00 37.88 4.85
164 168 1.601903 CTAGTGCCAACTTGTTTGCGA 59.398 47.619 5.35 0.00 37.88 5.10
231 345 6.183360 CGGCTTGAATGAATTTCTGCTACTAA 60.183 38.462 0.00 0.00 35.95 2.24
233 347 8.193438 GGCTTGAATGAATTTCTGCTACTAATT 58.807 33.333 0.00 0.00 35.95 1.40
234 348 9.578439 GCTTGAATGAATTTCTGCTACTAATTT 57.422 29.630 0.00 0.00 35.23 1.82
239 353 6.630071 TGAATTTCTGCTACTAATTTTGGGC 58.370 36.000 0.00 0.00 0.00 5.36
240 354 4.695217 TTTCTGCTACTAATTTTGGGCG 57.305 40.909 0.00 0.00 0.00 6.13
241 355 2.639065 TCTGCTACTAATTTTGGGCGG 58.361 47.619 0.00 0.00 0.00 6.13
280 399 1.758906 GAGAAGACGGGAGGGAGGG 60.759 68.421 0.00 0.00 0.00 4.30
340 494 1.595466 TTAACAACCGAATGCCACGT 58.405 45.000 0.00 0.00 0.00 4.49
344 498 1.595929 AACCGAATGCCACGTTCGT 60.596 52.632 17.68 6.30 45.05 3.85
358 512 1.461888 CGTTCGTTTCATTCTGCGGTC 60.462 52.381 0.00 0.00 0.00 4.79
362 516 0.179215 GTTTCATTCTGCGGTCGCTG 60.179 55.000 16.36 15.37 42.51 5.18
376 534 2.191641 GCTGGTGATCCTGGAGCC 59.808 66.667 9.83 8.48 33.97 4.70
389 547 3.558411 GAGCCATCGTGCAGACGC 61.558 66.667 0.00 0.00 45.68 5.19
403 561 2.515057 ACGCGTCCACAGCCAAAA 60.515 55.556 5.58 0.00 0.00 2.44
409 567 0.958822 GTCCACAGCCAAAACCGAAT 59.041 50.000 0.00 0.00 0.00 3.34
444 607 7.573968 AAAAACTCCTTATAGCCTGCTAATG 57.426 36.000 2.52 0.00 31.73 1.90
474 643 4.543590 TTTCTAGGCACCAGAAGAGAAG 57.456 45.455 0.00 0.00 33.72 2.85
526 695 1.707200 GGGAGGGGAGGTCTCTTCT 59.293 63.158 0.00 0.00 0.00 2.85
539 708 0.177604 CTCTTCTTGGCCTGCTCGAT 59.822 55.000 3.32 0.00 0.00 3.59
592 761 1.589716 AACCAAGCGAGCAGAATGGC 61.590 55.000 0.00 0.00 35.86 4.40
611 780 9.011095 AGAATGGCATCAAATGATACTCTAATG 57.989 33.333 0.00 0.00 32.63 1.90
613 782 9.529823 AATGGCATCAAATGATACTCTAATGAT 57.470 29.630 0.00 0.00 32.63 2.45
614 783 8.557592 TGGCATCAAATGATACTCTAATGATC 57.442 34.615 0.00 0.00 32.63 2.92
624 793 8.976986 TGATACTCTAATGATCATCATTGTCG 57.023 34.615 21.30 11.68 45.77 4.35
643 813 5.406649 TGTCGTTGGATGCCATTATTTTTC 58.593 37.500 0.00 0.00 31.53 2.29
644 814 4.803613 GTCGTTGGATGCCATTATTTTTCC 59.196 41.667 0.00 0.00 31.53 3.13
645 815 4.464244 TCGTTGGATGCCATTATTTTTCCA 59.536 37.500 0.00 0.00 31.53 3.53
651 821 4.484537 TGCCATTATTTTTCCATGGGTG 57.515 40.909 13.02 0.00 38.37 4.61
656 826 1.350071 ATTTTTCCATGGGTGCTGCA 58.650 45.000 13.02 0.00 0.00 4.41
657 827 0.392336 TTTTTCCATGGGTGCTGCAC 59.608 50.000 24.02 24.02 0.00 4.57
660 830 3.066190 CCATGGGTGCTGCACAGG 61.066 66.667 31.35 22.37 35.86 4.00
661 831 2.282674 CATGGGTGCTGCACAGGT 60.283 61.111 31.35 14.91 35.86 4.00
663 833 1.028330 CATGGGTGCTGCACAGGTAG 61.028 60.000 31.35 14.54 35.86 3.18
664 834 2.045926 GGGTGCTGCACAGGTAGG 60.046 66.667 31.35 0.00 35.86 3.18
665 835 2.750350 GGTGCTGCACAGGTAGGT 59.250 61.111 31.35 0.00 35.86 3.08
666 836 1.550130 GGGTGCTGCACAGGTAGGTA 61.550 60.000 31.35 0.00 35.86 3.08
667 837 0.108138 GGTGCTGCACAGGTAGGTAG 60.108 60.000 31.35 0.00 35.86 3.18
669 839 0.544357 TGCTGCACAGGTAGGTAGGT 60.544 55.000 0.00 0.00 0.00 3.08
670 840 1.272816 TGCTGCACAGGTAGGTAGGTA 60.273 52.381 0.00 0.00 0.00 3.08
671 841 1.136500 GCTGCACAGGTAGGTAGGTAC 59.864 57.143 0.00 0.00 0.00 3.34
697 867 1.360551 CGTGCTCGTCCTCCTATGG 59.639 63.158 0.00 0.00 0.00 2.74
753 1258 2.943345 GACTATTCGCCGCGGCATG 61.943 63.158 45.26 31.90 42.06 4.06
755 1260 1.663388 CTATTCGCCGCGGCATGTA 60.663 57.895 45.26 31.31 42.06 2.29
756 1261 1.218875 CTATTCGCCGCGGCATGTAA 61.219 55.000 45.26 32.41 42.06 2.41
757 1262 0.601576 TATTCGCCGCGGCATGTAAT 60.602 50.000 45.26 35.38 42.06 1.89
758 1263 0.601576 ATTCGCCGCGGCATGTAATA 60.602 50.000 45.26 23.50 42.06 0.98
772 1277 7.144661 CGGCATGTAATAAATCATTGGCTTTA 58.855 34.615 0.00 0.00 0.00 1.85
848 1358 3.442977 GCATGCATGGTTCTTCTCTTCTT 59.557 43.478 27.34 0.00 0.00 2.52
876 1397 4.621068 TGAAATGATTGCTTCGTCATCC 57.379 40.909 0.00 0.00 34.14 3.51
877 1398 3.378112 TGAAATGATTGCTTCGTCATCCC 59.622 43.478 0.00 0.00 34.14 3.85
878 1399 3.287867 AATGATTGCTTCGTCATCCCT 57.712 42.857 0.00 0.00 34.14 4.20
879 1400 2.315925 TGATTGCTTCGTCATCCCTC 57.684 50.000 0.00 0.00 0.00 4.30
880 1401 1.134401 TGATTGCTTCGTCATCCCTCC 60.134 52.381 0.00 0.00 0.00 4.30
881 1402 0.181350 ATTGCTTCGTCATCCCTCCC 59.819 55.000 0.00 0.00 0.00 4.30
882 1403 0.909610 TTGCTTCGTCATCCCTCCCT 60.910 55.000 0.00 0.00 0.00 4.20
883 1404 0.909610 TGCTTCGTCATCCCTCCCTT 60.910 55.000 0.00 0.00 0.00 3.95
884 1405 0.179070 GCTTCGTCATCCCTCCCTTC 60.179 60.000 0.00 0.00 0.00 3.46
885 1406 0.103208 CTTCGTCATCCCTCCCTTCG 59.897 60.000 0.00 0.00 0.00 3.79
886 1407 0.613853 TTCGTCATCCCTCCCTTCGT 60.614 55.000 0.00 0.00 0.00 3.85
887 1408 1.141881 CGTCATCCCTCCCTTCGTG 59.858 63.158 0.00 0.00 0.00 4.35
888 1409 1.153349 GTCATCCCTCCCTTCGTGC 60.153 63.158 0.00 0.00 0.00 5.34
889 1410 1.306141 TCATCCCTCCCTTCGTGCT 60.306 57.895 0.00 0.00 0.00 4.40
890 1411 1.144936 CATCCCTCCCTTCGTGCTC 59.855 63.158 0.00 0.00 0.00 4.26
891 1412 1.002274 ATCCCTCCCTTCGTGCTCT 59.998 57.895 0.00 0.00 0.00 4.09
892 1413 1.045911 ATCCCTCCCTTCGTGCTCTC 61.046 60.000 0.00 0.00 0.00 3.20
893 1414 2.726351 CCCTCCCTTCGTGCTCTCC 61.726 68.421 0.00 0.00 0.00 3.71
894 1415 2.726351 CCTCCCTTCGTGCTCTCCC 61.726 68.421 0.00 0.00 0.00 4.30
895 1416 1.684049 CTCCCTTCGTGCTCTCCCT 60.684 63.158 0.00 0.00 0.00 4.20
896 1417 1.671901 CTCCCTTCGTGCTCTCCCTC 61.672 65.000 0.00 0.00 0.00 4.30
897 1418 1.984570 CCCTTCGTGCTCTCCCTCA 60.985 63.158 0.00 0.00 0.00 3.86
904 1425 0.980231 GTGCTCTCCCTCACTCCCAT 60.980 60.000 0.00 0.00 0.00 4.00
948 1472 1.793414 TGATCCATCCATCCACGTCT 58.207 50.000 0.00 0.00 0.00 4.18
950 1474 1.001406 GATCCATCCATCCACGTCTCC 59.999 57.143 0.00 0.00 0.00 3.71
972 1496 3.970610 CCACGGTATATAAACACGAGTCG 59.029 47.826 11.85 11.85 0.00 4.18
973 1497 4.260743 CCACGGTATATAAACACGAGTCGA 60.261 45.833 21.50 0.00 0.00 4.20
1004 1532 1.148157 CGCTCGATCACACCCATGTC 61.148 60.000 0.00 0.00 36.72 3.06
1110 1644 3.114647 CTTCCTCCTCGTCGCCTCG 62.115 68.421 0.00 0.00 0.00 4.63
1202 1748 1.000607 CAAGAACCTCTTCGTCGACCA 60.001 52.381 10.58 0.00 33.78 4.02
1618 2173 4.025401 GTGCGTCGCCCTTGGTTG 62.025 66.667 15.88 0.00 0.00 3.77
1624 2240 2.668212 CGCCCTTGGTTGCTTCGA 60.668 61.111 0.00 0.00 0.00 3.71
1633 2249 1.089481 GGTTGCTTCGATCGCCATGA 61.089 55.000 11.09 0.00 0.00 3.07
1634 2250 0.940126 GTTGCTTCGATCGCCATGAT 59.060 50.000 11.09 0.00 41.06 2.45
1655 2271 4.873746 TCTCCTACTGTTCTTGGTGAAG 57.126 45.455 0.00 0.00 35.01 3.02
1656 2272 4.480115 TCTCCTACTGTTCTTGGTGAAGA 58.520 43.478 0.00 0.00 36.36 2.87
1658 2274 5.011125 TCTCCTACTGTTCTTGGTGAAGAAG 59.989 44.000 0.00 0.00 46.63 2.85
1659 2275 3.748568 CCTACTGTTCTTGGTGAAGAAGC 59.251 47.826 0.00 0.00 46.63 3.86
1660 2276 2.576615 ACTGTTCTTGGTGAAGAAGCC 58.423 47.619 0.00 0.00 46.63 4.35
1661 2277 2.092429 ACTGTTCTTGGTGAAGAAGCCA 60.092 45.455 0.00 0.00 46.63 4.75
1662 2278 2.551459 CTGTTCTTGGTGAAGAAGCCAG 59.449 50.000 0.00 0.00 46.63 4.85
1663 2279 2.092429 TGTTCTTGGTGAAGAAGCCAGT 60.092 45.455 0.00 0.00 46.63 4.00
1664 2280 3.135712 TGTTCTTGGTGAAGAAGCCAGTA 59.864 43.478 0.00 0.00 46.63 2.74
1665 2281 4.134563 GTTCTTGGTGAAGAAGCCAGTAA 58.865 43.478 0.00 0.00 46.63 2.24
1666 2282 4.008074 TCTTGGTGAAGAAGCCAGTAAG 57.992 45.455 0.00 0.00 35.14 2.34
1667 2283 3.646162 TCTTGGTGAAGAAGCCAGTAAGA 59.354 43.478 0.00 0.00 35.14 2.10
1669 2285 3.942829 TGGTGAAGAAGCCAGTAAGATG 58.057 45.455 0.00 0.00 0.00 2.90
1670 2286 3.582647 TGGTGAAGAAGCCAGTAAGATGA 59.417 43.478 0.00 0.00 0.00 2.92
1671 2287 4.225942 TGGTGAAGAAGCCAGTAAGATGAT 59.774 41.667 0.00 0.00 0.00 2.45
1672 2288 5.189180 GGTGAAGAAGCCAGTAAGATGATT 58.811 41.667 0.00 0.00 0.00 2.57
1676 2292 7.766278 GTGAAGAAGCCAGTAAGATGATTTAGA 59.234 37.037 0.00 0.00 0.00 2.10
1678 2294 9.336171 GAAGAAGCCAGTAAGATGATTTAGATT 57.664 33.333 0.00 0.00 0.00 2.40
1679 2295 9.692325 AAGAAGCCAGTAAGATGATTTAGATTT 57.308 29.630 0.00 0.00 0.00 2.17
1683 2299 9.247861 AGCCAGTAAGATGATTTAGATTTTTGT 57.752 29.630 0.00 0.00 0.00 2.83
1684 2300 9.508567 GCCAGTAAGATGATTTAGATTTTTGTC 57.491 33.333 0.00 0.00 0.00 3.18
1685 2301 9.708222 CCAGTAAGATGATTTAGATTTTTGTCG 57.292 33.333 0.00 0.00 0.00 4.35
1688 2304 9.000018 GTAAGATGATTTAGATTTTTGTCGTGC 58.000 33.333 0.00 0.00 0.00 5.34
1689 2305 6.250819 AGATGATTTAGATTTTTGTCGTGCG 58.749 36.000 0.00 0.00 0.00 5.34
1693 2325 0.040425 AGATTTTTGTCGTGCGTGCC 60.040 50.000 0.00 0.00 0.00 5.01
1785 2417 2.171940 GAAAGCGTGCGTGCTCTG 59.828 61.111 2.72 0.00 46.60 3.35
1813 2468 1.851304 TGATTTGATTGGAGGGCCAC 58.149 50.000 6.18 0.00 45.94 5.01
1835 2490 2.670789 GCGGTGCATCTTTTTACATGCA 60.671 45.455 2.47 2.47 46.29 3.96
1843 2498 7.656412 TGCATCTTTTTACATGCAAGTTTCTA 58.344 30.769 0.00 0.00 45.61 2.10
1844 2499 8.140628 TGCATCTTTTTACATGCAAGTTTCTAA 58.859 29.630 0.00 0.00 45.61 2.10
1853 2508 7.992180 ACATGCAAGTTTCTAAAAGTTCTTG 57.008 32.000 0.00 0.00 36.42 3.02
1854 2509 6.980397 ACATGCAAGTTTCTAAAAGTTCTTGG 59.020 34.615 0.00 0.00 34.69 3.61
1856 2511 6.329496 TGCAAGTTTCTAAAAGTTCTTGGTG 58.671 36.000 0.00 0.00 34.69 4.17
1857 2512 6.151985 TGCAAGTTTCTAAAAGTTCTTGGTGA 59.848 34.615 0.00 0.00 34.69 4.02
1858 2513 7.147915 TGCAAGTTTCTAAAAGTTCTTGGTGAT 60.148 33.333 0.00 0.00 34.69 3.06
1859 2514 7.379797 GCAAGTTTCTAAAAGTTCTTGGTGATC 59.620 37.037 0.00 0.00 34.69 2.92
1861 2516 6.766467 AGTTTCTAAAAGTTCTTGGTGATCGT 59.234 34.615 0.00 0.00 0.00 3.73
2009 2674 1.001974 TCTGAACGAATCTGTGGGTGG 59.998 52.381 0.00 0.00 0.00 4.61
2084 2754 6.684131 CACGTAGCAAAACATATCATCAACTG 59.316 38.462 0.00 0.00 0.00 3.16
2151 2821 6.524101 TTTTGGGATATTTAGTTGTGCTCC 57.476 37.500 0.00 0.00 0.00 4.70
2154 2824 5.132502 TGGGATATTTAGTTGTGCTCCATG 58.867 41.667 0.00 0.00 0.00 3.66
2201 2871 2.731571 GCACGGCACCTATCCCTGA 61.732 63.158 0.00 0.00 0.00 3.86
2205 2875 1.338136 CGGCACCTATCCCTGACCTT 61.338 60.000 0.00 0.00 0.00 3.50
2206 2876 0.181350 GGCACCTATCCCTGACCTTG 59.819 60.000 0.00 0.00 0.00 3.61
2207 2877 0.912486 GCACCTATCCCTGACCTTGT 59.088 55.000 0.00 0.00 0.00 3.16
2211 2881 1.132500 CTATCCCTGACCTTGTCCCC 58.868 60.000 0.00 0.00 0.00 4.81
2213 2883 0.178831 ATCCCTGACCTTGTCCCCTT 60.179 55.000 0.00 0.00 0.00 3.95
2215 2885 1.132332 TCCCTGACCTTGTCCCCTTAA 60.132 52.381 0.00 0.00 0.00 1.85
2216 2886 1.282157 CCCTGACCTTGTCCCCTTAAG 59.718 57.143 0.00 0.00 0.00 1.85
2217 2887 1.340114 CCTGACCTTGTCCCCTTAAGC 60.340 57.143 0.00 0.00 0.00 3.09
2218 2888 1.351017 CTGACCTTGTCCCCTTAAGCA 59.649 52.381 0.00 0.00 0.00 3.91
2219 2889 1.992557 TGACCTTGTCCCCTTAAGCAT 59.007 47.619 0.00 0.00 0.00 3.79
2245 2915 1.336148 CGTGTGTGCTGCCAATCATTT 60.336 47.619 0.00 0.00 0.00 2.32
2277 2947 4.745649 GGGTCTAATAGCCAGCTTATACG 58.254 47.826 0.00 0.00 45.71 3.06
2278 2948 4.220163 GGGTCTAATAGCCAGCTTATACGT 59.780 45.833 0.00 0.00 45.71 3.57
2280 2950 6.320944 GGTCTAATAGCCAGCTTATACGTAC 58.679 44.000 0.00 0.00 0.00 3.67
2281 2951 6.150809 GGTCTAATAGCCAGCTTATACGTACT 59.849 42.308 0.00 0.00 0.00 2.73
2283 2953 5.786264 AATAGCCAGCTTATACGTACTGT 57.214 39.130 0.00 0.00 0.00 3.55
2284 2954 3.712091 AGCCAGCTTATACGTACTGTC 57.288 47.619 0.00 0.00 0.00 3.51
2285 2955 2.033049 AGCCAGCTTATACGTACTGTCG 59.967 50.000 0.00 0.00 0.00 4.35
2296 2966 2.327343 TACTGTCGGTCGGTCACGG 61.327 63.158 0.00 0.00 41.39 4.94
2318 2988 3.627237 GCATTTCCCAGGGAGGAATTGTA 60.627 47.826 8.67 0.00 45.30 2.41
2319 2989 4.808042 CATTTCCCAGGGAGGAATTGTAT 58.192 43.478 8.67 0.00 45.30 2.29
2322 2992 3.197983 TCCCAGGGAGGAATTGTATTGT 58.802 45.455 3.01 0.00 41.22 2.71
2438 3116 1.488812 TGATAATCCCACCGTCCCTTG 59.511 52.381 0.00 0.00 0.00 3.61
2445 3123 1.555992 CCCACCGTCCCTTGTTACATA 59.444 52.381 0.00 0.00 0.00 2.29
2544 3285 8.617290 AAGTATTCAACTTCGTTGGAAACTAT 57.383 30.769 6.86 0.00 45.64 2.12
2563 3304 9.209175 GAAACTATTCCATCTGTTCGCTATTAT 57.791 33.333 0.00 0.00 0.00 1.28
2570 3311 7.896811 TCCATCTGTTCGCTATTATAAGATGT 58.103 34.615 8.47 0.00 38.45 3.06
2637 3378 6.071952 AGTGTGTTTGTTCACTCATTTCAGTT 60.072 34.615 0.00 0.00 40.28 3.16
2638 3379 6.251376 GTGTGTTTGTTCACTCATTTCAGTTC 59.749 38.462 0.00 0.00 38.90 3.01
2640 3381 5.123186 TGTTTGTTCACTCATTTCAGTTCGT 59.877 36.000 0.00 0.00 0.00 3.85
2701 3454 4.760530 TGAACAGAGGGAGTATGAATGG 57.239 45.455 0.00 0.00 0.00 3.16
2704 3502 5.128827 TGAACAGAGGGAGTATGAATGGTAC 59.871 44.000 0.00 0.00 0.00 3.34
2790 3588 5.941555 ATAGACAAAGGGAGTTCCACTAG 57.058 43.478 0.00 0.00 38.24 2.57
2791 3589 3.858135 AGACAAAGGGAGTTCCACTAGA 58.142 45.455 0.00 0.00 38.24 2.43
2792 3590 3.579151 AGACAAAGGGAGTTCCACTAGAC 59.421 47.826 0.00 0.00 38.24 2.59
2793 3591 3.314693 ACAAAGGGAGTTCCACTAGACA 58.685 45.455 0.00 0.00 38.24 3.41
2794 3592 3.910627 ACAAAGGGAGTTCCACTAGACAT 59.089 43.478 0.00 0.00 38.24 3.06
2836 3699 1.069204 GCAGAACATCTAGATGGCCGA 59.931 52.381 31.19 0.00 42.91 5.54
2861 3790 3.745458 ACAACCAAGCACAAAAACAACAG 59.255 39.130 0.00 0.00 0.00 3.16
3561 4666 5.346281 CAGTGCAAAGTAGCAGTAGTAGAAC 59.654 44.000 0.00 0.00 45.92 3.01
3617 4722 2.830321 TCCCTCGGAAAAGGTAGAAGAC 59.170 50.000 0.00 0.00 34.34 3.01
3636 4741 4.473444 AGACCATCACTGAAACAATTGGT 58.527 39.130 10.83 0.00 38.64 3.67
3637 4742 4.895297 AGACCATCACTGAAACAATTGGTT 59.105 37.500 8.88 8.88 42.98 3.67
3668 4773 7.827236 ACATTCTTTCCGGATGTCATTTTAGTA 59.173 33.333 4.15 0.00 0.00 1.82
3745 4864 0.599558 TACGGGTCGAACTCAAGTGG 59.400 55.000 0.00 0.00 0.00 4.00
3756 4875 4.612259 CGAACTCAAGTGGCATTTTCTCTG 60.612 45.833 0.00 0.00 0.00 3.35
3776 4895 4.216257 TCTGCTTGGCATCTTTAACTTGTC 59.784 41.667 0.00 0.00 38.13 3.18
3792 4911 2.270352 TGTCTAAGGGCAACACCAAG 57.730 50.000 0.00 0.00 42.05 3.61
3822 4941 1.063469 CAAACGGACGCAGAAAGTGTT 59.937 47.619 0.00 0.00 42.04 3.32
3823 4942 1.375551 AACGGACGCAGAAAGTGTTT 58.624 45.000 0.00 0.00 42.04 2.83
3856 4977 1.676678 GCCAGACAGATAGGCGTCCA 61.677 60.000 0.00 0.00 38.86 4.02
3857 4978 1.043816 CCAGACAGATAGGCGTCCAT 58.956 55.000 0.00 0.00 32.33 3.41
3862 4983 1.414181 ACAGATAGGCGTCCATCCAAG 59.586 52.381 0.00 0.00 0.00 3.61
3881 5002 0.182299 GGAGGAATTGGAGAGCCTGG 59.818 60.000 0.00 0.00 34.31 4.45
3889 5010 2.867109 TGGAGAGCCTGGAAGAAAAG 57.133 50.000 0.00 0.00 34.07 2.27
3926 5047 8.991783 AATGATTGATCAATGGAGTACAGATT 57.008 30.769 25.37 5.78 40.69 2.40
3931 5052 7.423844 TGATCAATGGAGTACAGATTAGTGT 57.576 36.000 0.00 0.00 34.21 3.55
3966 5087 3.128242 GGTGATGTGAGATTCAAGGCAAG 59.872 47.826 0.00 0.00 0.00 4.01
3976 5097 8.037166 GTGAGATTCAAGGCAAGGAAATTTTAT 58.963 33.333 0.00 0.00 0.00 1.40
3978 5099 9.741647 GAGATTCAAGGCAAGGAAATTTTATAG 57.258 33.333 0.00 0.00 0.00 1.31
3982 5103 7.610865 TCAAGGCAAGGAAATTTTATAGGTTG 58.389 34.615 0.00 0.00 0.00 3.77
3987 5108 7.973944 GGCAAGGAAATTTTATAGGTTGTACTG 59.026 37.037 0.00 0.00 0.00 2.74
3988 5109 8.520351 GCAAGGAAATTTTATAGGTTGTACTGT 58.480 33.333 0.00 0.00 0.00 3.55
4016 5137 6.578023 TCAGAAATTTAAACCACCCAAAGTG 58.422 36.000 0.00 0.00 46.83 3.16
4072 5437 0.177836 ACACAAGGGTTTTGCTTGGC 59.822 50.000 0.00 0.00 32.86 4.52
4114 5479 7.148641 AGTCAATACCAGAGATTTACTATGCG 58.851 38.462 0.00 0.00 36.61 4.73
4173 5706 0.118346 TCTGCCCCTCTGGTTCCTTA 59.882 55.000 0.00 0.00 36.04 2.69
4282 5815 8.387190 CAACTATGCAAGAGATGATGGAATTA 57.613 34.615 6.02 0.00 0.00 1.40
4290 5823 5.383476 AGAGATGATGGAATTAGCCCAAAG 58.617 41.667 0.00 0.00 37.22 2.77
4310 5846 1.202867 GGGAATCATCAGCCCCTCTTC 60.203 57.143 0.00 0.00 35.76 2.87
4387 6192 6.112058 GCTACTTTGAGAAGATCAGACCATT 58.888 40.000 0.00 0.00 39.68 3.16
4388 6193 6.036953 GCTACTTTGAGAAGATCAGACCATTG 59.963 42.308 0.00 0.00 39.68 2.82
4389 6194 5.874093 ACTTTGAGAAGATCAGACCATTGT 58.126 37.500 0.00 0.00 39.68 2.71
4390 6195 6.302269 ACTTTGAGAAGATCAGACCATTGTT 58.698 36.000 0.00 0.00 39.68 2.83
4391 6196 7.453393 ACTTTGAGAAGATCAGACCATTGTTA 58.547 34.615 0.00 0.00 39.68 2.41
4392 6197 7.605691 ACTTTGAGAAGATCAGACCATTGTTAG 59.394 37.037 0.00 0.00 39.68 2.34
4393 6198 6.857437 TGAGAAGATCAGACCATTGTTAGA 57.143 37.500 0.00 0.00 32.77 2.10
4394 6199 7.429374 TGAGAAGATCAGACCATTGTTAGAT 57.571 36.000 0.00 0.00 32.77 1.98
4395 6200 7.270779 TGAGAAGATCAGACCATTGTTAGATG 58.729 38.462 0.00 0.00 32.77 2.90
4396 6201 7.124750 TGAGAAGATCAGACCATTGTTAGATGA 59.875 37.037 0.00 0.00 32.77 2.92
4397 6202 8.032045 AGAAGATCAGACCATTGTTAGATGAT 57.968 34.615 0.00 0.00 0.00 2.45
4398 6203 9.152327 AGAAGATCAGACCATTGTTAGATGATA 57.848 33.333 0.00 0.00 0.00 2.15
4399 6204 9.941325 GAAGATCAGACCATTGTTAGATGATAT 57.059 33.333 0.00 0.00 0.00 1.63
4401 6206 9.722184 AGATCAGACCATTGTTAGATGATATTG 57.278 33.333 0.00 0.00 0.00 1.90
4402 6207 9.499479 GATCAGACCATTGTTAGATGATATTGT 57.501 33.333 0.00 0.00 0.00 2.71
4418 6223 9.349713 GATGATATTGTATAGAGGTAGGAGAGG 57.650 40.741 0.00 0.00 0.00 3.69
4419 6224 8.233349 TGATATTGTATAGAGGTAGGAGAGGT 57.767 38.462 0.00 0.00 0.00 3.85
4420 6225 8.110271 TGATATTGTATAGAGGTAGGAGAGGTG 58.890 40.741 0.00 0.00 0.00 4.00
4421 6226 5.728937 TTGTATAGAGGTAGGAGAGGTGT 57.271 43.478 0.00 0.00 0.00 4.16
4422 6227 5.728937 TGTATAGAGGTAGGAGAGGTGTT 57.271 43.478 0.00 0.00 0.00 3.32
4423 6228 6.088541 TGTATAGAGGTAGGAGAGGTGTTT 57.911 41.667 0.00 0.00 0.00 2.83
4424 6229 7.217028 TGTATAGAGGTAGGAGAGGTGTTTA 57.783 40.000 0.00 0.00 0.00 2.01
4425 6230 7.645942 TGTATAGAGGTAGGAGAGGTGTTTAA 58.354 38.462 0.00 0.00 0.00 1.52
4426 6231 8.117956 TGTATAGAGGTAGGAGAGGTGTTTAAA 58.882 37.037 0.00 0.00 0.00 1.52
4427 6232 5.741962 AGAGGTAGGAGAGGTGTTTAAAC 57.258 43.478 11.54 11.54 0.00 2.01
4428 6233 4.531339 AGAGGTAGGAGAGGTGTTTAAACC 59.469 45.833 15.59 1.86 40.85 3.27
4452 6257 9.487442 ACCTTGTATCTTTCTATCTCTTCTTCT 57.513 33.333 0.00 0.00 0.00 2.85
4453 6258 9.748708 CCTTGTATCTTTCTATCTCTTCTTCTG 57.251 37.037 0.00 0.00 0.00 3.02
4460 6265 9.915629 TCTTTCTATCTCTTCTTCTGTTGTAAC 57.084 33.333 0.00 0.00 0.00 2.50
4461 6266 9.921637 CTTTCTATCTCTTCTTCTGTTGTAACT 57.078 33.333 0.00 0.00 0.00 2.24
4463 6268 9.915629 TTCTATCTCTTCTTCTGTTGTAACTTC 57.084 33.333 0.00 0.00 0.00 3.01
4464 6269 8.524487 TCTATCTCTTCTTCTGTTGTAACTTCC 58.476 37.037 0.00 0.00 0.00 3.46
4465 6270 5.855045 TCTCTTCTTCTGTTGTAACTTCCC 58.145 41.667 0.00 0.00 0.00 3.97
4466 6271 4.969484 TCTTCTTCTGTTGTAACTTCCCC 58.031 43.478 0.00 0.00 0.00 4.81
4467 6272 4.410883 TCTTCTTCTGTTGTAACTTCCCCA 59.589 41.667 0.00 0.00 0.00 4.96
4468 6273 4.781775 TCTTCTGTTGTAACTTCCCCAA 57.218 40.909 0.00 0.00 0.00 4.12
4469 6274 5.319043 TCTTCTGTTGTAACTTCCCCAAT 57.681 39.130 0.00 0.00 0.00 3.16
4470 6275 5.313712 TCTTCTGTTGTAACTTCCCCAATC 58.686 41.667 0.00 0.00 0.00 2.67
4471 6276 4.993705 TCTGTTGTAACTTCCCCAATCT 57.006 40.909 0.00 0.00 0.00 2.40
4472 6277 4.906618 TCTGTTGTAACTTCCCCAATCTC 58.093 43.478 0.00 0.00 0.00 2.75
4473 6278 4.010349 CTGTTGTAACTTCCCCAATCTCC 58.990 47.826 0.00 0.00 0.00 3.71
4474 6279 3.655777 TGTTGTAACTTCCCCAATCTCCT 59.344 43.478 0.00 0.00 0.00 3.69
4475 6280 4.010349 GTTGTAACTTCCCCAATCTCCTG 58.990 47.826 0.00 0.00 0.00 3.86
4476 6281 3.256704 TGTAACTTCCCCAATCTCCTGT 58.743 45.455 0.00 0.00 0.00 4.00
4477 6282 4.431378 TGTAACTTCCCCAATCTCCTGTA 58.569 43.478 0.00 0.00 0.00 2.74
4478 6283 4.847512 TGTAACTTCCCCAATCTCCTGTAA 59.152 41.667 0.00 0.00 0.00 2.41
4479 6284 4.302559 AACTTCCCCAATCTCCTGTAAC 57.697 45.455 0.00 0.00 0.00 2.50
4480 6285 2.236395 ACTTCCCCAATCTCCTGTAACG 59.764 50.000 0.00 0.00 0.00 3.18
4481 6286 2.241281 TCCCCAATCTCCTGTAACGA 57.759 50.000 0.00 0.00 0.00 3.85
4482 6287 2.759355 TCCCCAATCTCCTGTAACGAT 58.241 47.619 0.00 0.00 0.00 3.73
4483 6288 2.698797 TCCCCAATCTCCTGTAACGATC 59.301 50.000 0.00 0.00 0.00 3.69
4484 6289 2.434336 CCCCAATCTCCTGTAACGATCA 59.566 50.000 0.00 0.00 0.00 2.92
4485 6290 3.458189 CCCAATCTCCTGTAACGATCAC 58.542 50.000 0.00 0.00 0.00 3.06
4486 6291 3.116300 CCAATCTCCTGTAACGATCACG 58.884 50.000 0.00 0.00 45.75 4.35
4487 6292 3.181490 CCAATCTCCTGTAACGATCACGA 60.181 47.826 0.00 0.00 42.66 4.35
4488 6293 4.499865 CCAATCTCCTGTAACGATCACGAT 60.500 45.833 0.00 0.00 42.66 3.73
4489 6294 3.965292 TCTCCTGTAACGATCACGATC 57.035 47.619 0.00 0.00 42.66 3.69
4501 6306 4.014847 GATCACGATCGATCTCCTCATC 57.985 50.000 24.34 12.26 39.02 2.92
4502 6307 1.801178 TCACGATCGATCTCCTCATCG 59.199 52.381 24.34 11.20 45.91 3.84
4513 6318 6.567687 GATCTCCTCATCGATCTCTTGTAA 57.432 41.667 0.00 0.00 34.59 2.41
4514 6319 6.573664 ATCTCCTCATCGATCTCTTGTAAG 57.426 41.667 0.00 0.00 0.00 2.34
4515 6320 4.277174 TCTCCTCATCGATCTCTTGTAAGC 59.723 45.833 0.00 0.00 0.00 3.09
4516 6321 3.319405 TCCTCATCGATCTCTTGTAAGCC 59.681 47.826 0.00 0.00 0.00 4.35
4517 6322 3.068732 CCTCATCGATCTCTTGTAAGCCA 59.931 47.826 0.00 0.00 0.00 4.75
4518 6323 4.046938 TCATCGATCTCTTGTAAGCCAC 57.953 45.455 0.00 0.00 0.00 5.01
4519 6324 2.561733 TCGATCTCTTGTAAGCCACG 57.438 50.000 0.00 0.00 0.00 4.94
4520 6325 1.134367 TCGATCTCTTGTAAGCCACGG 59.866 52.381 0.00 0.00 0.00 4.94
4521 6326 1.291132 GATCTCTTGTAAGCCACGGC 58.709 55.000 0.00 0.00 42.33 5.68
4522 6327 0.613260 ATCTCTTGTAAGCCACGGCA 59.387 50.000 11.35 0.00 44.88 5.69
4523 6328 0.320421 TCTCTTGTAAGCCACGGCAC 60.320 55.000 11.35 0.91 44.88 5.01
4524 6329 0.602638 CTCTTGTAAGCCACGGCACA 60.603 55.000 11.35 3.87 44.88 4.57
4525 6330 0.036164 TCTTGTAAGCCACGGCACAT 59.964 50.000 11.35 0.00 44.88 3.21
4526 6331 1.276705 TCTTGTAAGCCACGGCACATA 59.723 47.619 11.35 0.00 44.88 2.29
4527 6332 2.093181 TCTTGTAAGCCACGGCACATAT 60.093 45.455 11.35 0.00 44.88 1.78
4528 6333 1.662517 TGTAAGCCACGGCACATATG 58.337 50.000 11.35 0.00 44.88 1.78
4529 6334 1.208293 TGTAAGCCACGGCACATATGA 59.792 47.619 10.38 0.00 44.88 2.15
4530 6335 2.158827 TGTAAGCCACGGCACATATGAT 60.159 45.455 10.38 0.00 44.88 2.45
4531 6336 2.928801 AAGCCACGGCACATATGATA 57.071 45.000 10.38 0.00 44.88 2.15
4532 6337 3.423539 AAGCCACGGCACATATGATAT 57.576 42.857 10.38 0.00 44.88 1.63
4533 6338 4.551702 AAGCCACGGCACATATGATATA 57.448 40.909 10.38 0.00 44.88 0.86
4534 6339 4.551702 AGCCACGGCACATATGATATAA 57.448 40.909 10.38 0.00 44.88 0.98
4535 6340 4.905429 AGCCACGGCACATATGATATAAA 58.095 39.130 10.38 0.00 44.88 1.40
4536 6341 5.500234 AGCCACGGCACATATGATATAAAT 58.500 37.500 10.38 0.00 44.88 1.40
4537 6342 6.649155 AGCCACGGCACATATGATATAAATA 58.351 36.000 10.38 0.00 44.88 1.40
4538 6343 7.282585 AGCCACGGCACATATGATATAAATAT 58.717 34.615 10.38 0.00 44.88 1.28
4539 6344 8.428852 AGCCACGGCACATATGATATAAATATA 58.571 33.333 10.38 0.00 44.88 0.86
4540 6345 8.712363 GCCACGGCACATATGATATAAATATAG 58.288 37.037 10.38 0.00 41.49 1.31
4541 6346 9.981114 CCACGGCACATATGATATAAATATAGA 57.019 33.333 10.38 0.00 0.00 1.98
4548 6353 9.658799 ACATATGATATAAATATAGATGCGGCC 57.341 33.333 10.38 0.00 0.00 6.13
4549 6354 9.102757 CATATGATATAAATATAGATGCGGCCC 57.897 37.037 0.00 0.00 0.00 5.80
4550 6355 5.538118 TGATATAAATATAGATGCGGCCCG 58.462 41.667 0.00 0.00 0.00 6.13
4551 6356 5.303333 TGATATAAATATAGATGCGGCCCGA 59.697 40.000 7.68 0.00 0.00 5.14
4552 6357 2.386661 AAATATAGATGCGGCCCGAG 57.613 50.000 7.68 0.00 0.00 4.63
4553 6358 0.108138 AATATAGATGCGGCCCGAGC 60.108 55.000 7.68 0.00 38.76 5.03
4564 6369 4.492604 CCCGAGCAAAGGGTTCAA 57.507 55.556 3.29 0.00 43.89 2.69
4565 6370 1.956802 CCCGAGCAAAGGGTTCAAC 59.043 57.895 3.29 0.00 43.89 3.18
4566 6371 1.574428 CCGAGCAAAGGGTTCAACG 59.426 57.895 0.00 0.00 0.00 4.10
4567 6372 1.082104 CGAGCAAAGGGTTCAACGC 60.082 57.895 0.00 0.00 0.00 4.84
4568 6373 1.507141 CGAGCAAAGGGTTCAACGCT 61.507 55.000 0.16 0.16 43.70 5.07
4573 6378 3.745723 AAGGGTTCAACGCTTCCAT 57.254 47.368 13.89 0.00 46.59 3.41
4574 6379 1.534729 AAGGGTTCAACGCTTCCATC 58.465 50.000 13.89 0.00 46.59 3.51
4575 6380 0.673644 AGGGTTCAACGCTTCCATCG 60.674 55.000 0.16 0.00 38.28 3.84
4576 6381 0.672401 GGGTTCAACGCTTCCATCGA 60.672 55.000 0.00 0.00 0.00 3.59
4577 6382 0.442699 GGTTCAACGCTTCCATCGAC 59.557 55.000 0.00 0.00 0.00 4.20
4578 6383 0.093026 GTTCAACGCTTCCATCGACG 59.907 55.000 0.00 0.00 0.00 5.12
4579 6384 0.319211 TTCAACGCTTCCATCGACGT 60.319 50.000 0.00 0.00 41.16 4.34
4580 6385 4.667420 AACGCTTCCATCGACGTT 57.333 50.000 3.70 3.70 43.32 3.99
4581 6386 0.511221 CAACGCTTCCATCGACGTTT 59.489 50.000 6.51 0.00 45.62 3.60
4582 6387 1.722464 CAACGCTTCCATCGACGTTTA 59.278 47.619 6.51 0.00 45.62 2.01
4583 6388 1.343506 ACGCTTCCATCGACGTTTAC 58.656 50.000 0.00 0.00 34.62 2.01
4584 6389 1.336148 ACGCTTCCATCGACGTTTACA 60.336 47.619 0.00 0.00 34.62 2.41
4585 6390 1.924524 CGCTTCCATCGACGTTTACAT 59.075 47.619 0.00 0.00 0.00 2.29
4586 6391 2.285026 CGCTTCCATCGACGTTTACATG 60.285 50.000 0.00 0.00 0.00 3.21
4587 6392 2.030457 GCTTCCATCGACGTTTACATGG 59.970 50.000 6.24 6.24 37.70 3.66
4588 6393 3.259064 CTTCCATCGACGTTTACATGGT 58.741 45.455 11.10 0.00 37.62 3.55
4589 6394 4.426416 CTTCCATCGACGTTTACATGGTA 58.574 43.478 11.10 2.97 37.62 3.25
4590 6395 4.453177 TCCATCGACGTTTACATGGTAA 57.547 40.909 11.10 0.00 37.62 2.85
4591 6396 4.175516 TCCATCGACGTTTACATGGTAAC 58.824 43.478 11.10 0.00 37.62 2.50
4604 6409 2.327325 TGGTAACAGAGCCTCTTCCT 57.673 50.000 0.00 0.00 46.17 3.36
4605 6410 2.180276 TGGTAACAGAGCCTCTTCCTC 58.820 52.381 0.00 0.00 46.17 3.71
4606 6411 1.135333 GGTAACAGAGCCTCTTCCTCG 59.865 57.143 0.00 0.00 34.56 4.63
4607 6412 2.093106 GTAACAGAGCCTCTTCCTCGA 58.907 52.381 0.00 0.00 34.56 4.04
4608 6413 1.859302 AACAGAGCCTCTTCCTCGAT 58.141 50.000 0.00 0.00 34.56 3.59
4609 6414 2.738587 ACAGAGCCTCTTCCTCGATA 57.261 50.000 0.00 0.00 34.56 2.92
4610 6415 3.019799 ACAGAGCCTCTTCCTCGATAA 57.980 47.619 0.00 0.00 34.56 1.75
4611 6416 2.955660 ACAGAGCCTCTTCCTCGATAAG 59.044 50.000 0.00 2.08 34.56 1.73
4612 6417 2.955660 CAGAGCCTCTTCCTCGATAAGT 59.044 50.000 0.00 0.00 34.56 2.24
4613 6418 3.383185 CAGAGCCTCTTCCTCGATAAGTT 59.617 47.826 0.00 0.00 34.56 2.66
4614 6419 3.383185 AGAGCCTCTTCCTCGATAAGTTG 59.617 47.826 7.35 2.77 34.56 3.16
4615 6420 2.432510 AGCCTCTTCCTCGATAAGTTGG 59.567 50.000 7.35 10.66 0.00 3.77
4616 6421 2.431057 GCCTCTTCCTCGATAAGTTGGA 59.569 50.000 17.59 5.92 0.00 3.53
4617 6422 3.070302 GCCTCTTCCTCGATAAGTTGGAT 59.930 47.826 17.59 0.00 0.00 3.41
4618 6423 4.281182 GCCTCTTCCTCGATAAGTTGGATA 59.719 45.833 17.59 1.57 0.00 2.59
4619 6424 5.565834 GCCTCTTCCTCGATAAGTTGGATAG 60.566 48.000 17.59 8.30 0.00 2.08
4620 6425 5.770663 CCTCTTCCTCGATAAGTTGGATAGA 59.229 44.000 7.35 4.95 0.00 1.98
4621 6426 6.072175 CCTCTTCCTCGATAAGTTGGATAGAG 60.072 46.154 14.49 14.49 35.77 2.43
4622 6427 6.602278 TCTTCCTCGATAAGTTGGATAGAGA 58.398 40.000 7.35 0.00 30.11 3.10
4623 6428 7.235079 TCTTCCTCGATAAGTTGGATAGAGAT 58.765 38.462 7.35 0.00 30.11 2.75
4624 6429 7.392113 TCTTCCTCGATAAGTTGGATAGAGATC 59.608 40.741 7.35 0.00 30.11 2.75
4625 6430 5.644206 TCCTCGATAAGTTGGATAGAGATCG 59.356 44.000 0.00 0.00 36.83 3.69
4626 6431 5.298197 TCGATAAGTTGGATAGAGATCGC 57.702 43.478 0.00 0.00 35.78 4.58
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.595138 ACTACCTCTACAGTGGGGAGTAA 59.405 47.826 0.00 0.00 31.54 2.24
1 2 3.196300 ACTACCTCTACAGTGGGGAGTA 58.804 50.000 0.00 0.00 31.54 2.59
2 3 2.001558 ACTACCTCTACAGTGGGGAGT 58.998 52.381 11.75 4.90 33.22 3.85
7 8 7.055378 AGACTATGTTACTACCTCTACAGTGG 58.945 42.308 0.00 0.00 34.99 4.00
8 9 9.263538 CTAGACTATGTTACTACCTCTACAGTG 57.736 40.741 0.00 0.00 0.00 3.66
9 10 7.933033 GCTAGACTATGTTACTACCTCTACAGT 59.067 40.741 0.00 0.00 0.00 3.55
10 11 7.932491 TGCTAGACTATGTTACTACCTCTACAG 59.068 40.741 0.00 0.00 0.00 2.74
11 12 7.799081 TGCTAGACTATGTTACTACCTCTACA 58.201 38.462 0.00 0.00 0.00 2.74
12 13 8.558700 GTTGCTAGACTATGTTACTACCTCTAC 58.441 40.741 0.00 0.00 0.00 2.59
13 14 8.270030 TGTTGCTAGACTATGTTACTACCTCTA 58.730 37.037 0.00 0.00 0.00 2.43
14 15 7.117397 TGTTGCTAGACTATGTTACTACCTCT 58.883 38.462 0.00 0.00 0.00 3.69
15 16 7.330900 TGTTGCTAGACTATGTTACTACCTC 57.669 40.000 0.00 0.00 0.00 3.85
16 17 7.201920 CCATGTTGCTAGACTATGTTACTACCT 60.202 40.741 0.00 0.00 0.00 3.08
17 18 6.924060 CCATGTTGCTAGACTATGTTACTACC 59.076 42.308 0.00 0.00 0.00 3.18
18 19 6.924060 CCCATGTTGCTAGACTATGTTACTAC 59.076 42.308 0.00 0.00 0.00 2.73
19 20 6.462487 GCCCATGTTGCTAGACTATGTTACTA 60.462 42.308 0.00 0.00 0.00 1.82
20 21 5.685075 GCCCATGTTGCTAGACTATGTTACT 60.685 44.000 0.00 0.00 0.00 2.24
21 22 4.511826 GCCCATGTTGCTAGACTATGTTAC 59.488 45.833 0.00 0.00 0.00 2.50
22 23 4.163268 TGCCCATGTTGCTAGACTATGTTA 59.837 41.667 0.00 0.00 0.00 2.41
23 24 3.054434 TGCCCATGTTGCTAGACTATGTT 60.054 43.478 0.00 0.00 0.00 2.71
24 25 2.505407 TGCCCATGTTGCTAGACTATGT 59.495 45.455 0.00 0.00 0.00 2.29
25 26 3.198409 TGCCCATGTTGCTAGACTATG 57.802 47.619 0.00 0.00 0.00 2.23
26 27 3.748083 CATGCCCATGTTGCTAGACTAT 58.252 45.455 0.00 0.00 34.23 2.12
27 28 3.198409 CATGCCCATGTTGCTAGACTA 57.802 47.619 0.00 0.00 34.23 2.59
28 29 2.048444 CATGCCCATGTTGCTAGACT 57.952 50.000 0.00 0.00 34.23 3.24
38 39 4.202398 ACATAGACTAGGAACATGCCCATG 60.202 45.833 6.71 6.71 44.15 3.66
39 40 3.976654 ACATAGACTAGGAACATGCCCAT 59.023 43.478 0.22 0.00 0.00 4.00
40 41 3.384168 ACATAGACTAGGAACATGCCCA 58.616 45.455 0.22 0.00 0.00 5.36
41 42 4.423625 AACATAGACTAGGAACATGCCC 57.576 45.455 0.22 0.00 0.00 5.36
42 43 6.163135 AGTAACATAGACTAGGAACATGCC 57.837 41.667 0.22 0.00 0.00 4.40
43 44 8.030106 GGATAGTAACATAGACTAGGAACATGC 58.970 40.741 0.22 0.00 33.03 4.06
44 45 9.078990 TGGATAGTAACATAGACTAGGAACATG 57.921 37.037 0.22 0.00 33.03 3.21
45 46 9.830186 ATGGATAGTAACATAGACTAGGAACAT 57.170 33.333 0.22 0.00 33.03 2.71
46 47 9.656323 AATGGATAGTAACATAGACTAGGAACA 57.344 33.333 0.22 0.00 33.03 3.18
47 48 9.915629 CAATGGATAGTAACATAGACTAGGAAC 57.084 37.037 0.22 0.00 33.03 3.62
48 49 9.656323 ACAATGGATAGTAACATAGACTAGGAA 57.344 33.333 0.22 0.00 33.03 3.36
49 50 9.078990 CACAATGGATAGTAACATAGACTAGGA 57.921 37.037 0.22 0.00 33.03 2.94
50 51 8.307483 CCACAATGGATAGTAACATAGACTAGG 58.693 40.741 0.00 0.00 40.96 3.02
51 52 7.815068 GCCACAATGGATAGTAACATAGACTAG 59.185 40.741 0.00 0.00 40.96 2.57
52 53 7.509318 AGCCACAATGGATAGTAACATAGACTA 59.491 37.037 0.00 0.00 40.96 2.59
53 54 6.327626 AGCCACAATGGATAGTAACATAGACT 59.672 38.462 0.00 0.00 40.96 3.24
54 55 6.525629 AGCCACAATGGATAGTAACATAGAC 58.474 40.000 0.00 0.00 40.96 2.59
55 56 6.747414 AGCCACAATGGATAGTAACATAGA 57.253 37.500 0.00 0.00 40.96 1.98
65 66 5.897250 TGTCTTAGACTAGCCACAATGGATA 59.103 40.000 13.86 0.00 37.36 2.59
66 67 4.716784 TGTCTTAGACTAGCCACAATGGAT 59.283 41.667 13.86 0.00 40.55 3.41
67 68 4.093743 TGTCTTAGACTAGCCACAATGGA 58.906 43.478 13.86 0.00 34.75 3.41
68 69 4.081420 ACTGTCTTAGACTAGCCACAATGG 60.081 45.833 13.86 0.00 35.45 3.16
69 70 5.078411 ACTGTCTTAGACTAGCCACAATG 57.922 43.478 13.86 0.00 33.15 2.82
70 71 5.012148 ACAACTGTCTTAGACTAGCCACAAT 59.988 40.000 13.86 0.00 33.15 2.71
71 72 4.344102 ACAACTGTCTTAGACTAGCCACAA 59.656 41.667 13.86 0.00 33.15 3.33
72 73 3.895656 ACAACTGTCTTAGACTAGCCACA 59.104 43.478 13.86 0.00 33.15 4.17
73 74 4.238514 CACAACTGTCTTAGACTAGCCAC 58.761 47.826 13.86 0.00 33.15 5.01
74 75 3.258372 CCACAACTGTCTTAGACTAGCCA 59.742 47.826 13.86 0.00 33.15 4.75
75 76 3.510360 TCCACAACTGTCTTAGACTAGCC 59.490 47.826 13.86 0.00 33.15 3.93
76 77 4.218852 AGTCCACAACTGTCTTAGACTAGC 59.781 45.833 13.86 0.00 36.65 3.42
77 78 5.968528 AGTCCACAACTGTCTTAGACTAG 57.031 43.478 13.86 11.17 36.65 2.57
89 90 1.152963 GGCACCACAGTCCACAACT 60.153 57.895 0.00 0.00 39.44 3.16
90 91 1.034838 TTGGCACCACAGTCCACAAC 61.035 55.000 0.00 0.00 0.00 3.32
91 92 0.106268 ATTGGCACCACAGTCCACAA 60.106 50.000 0.00 0.00 0.00 3.33
92 93 0.822944 CATTGGCACCACAGTCCACA 60.823 55.000 0.00 0.00 0.00 4.17
93 94 0.537143 TCATTGGCACCACAGTCCAC 60.537 55.000 0.00 0.00 0.00 4.02
94 95 0.184692 TTCATTGGCACCACAGTCCA 59.815 50.000 0.00 0.00 0.00 4.02
95 96 1.203052 CATTCATTGGCACCACAGTCC 59.797 52.381 0.00 0.00 0.00 3.85
99 100 1.702182 ACACATTCATTGGCACCACA 58.298 45.000 0.00 0.00 0.00 4.17
149 153 0.249031 AGCTTCGCAAACAAGTTGGC 60.249 50.000 7.96 2.17 37.73 4.52
159 163 2.203195 ACCACTGCAGCTTCGCAA 60.203 55.556 15.27 0.00 42.45 4.85
161 165 4.395583 GCACCACTGCAGCTTCGC 62.396 66.667 15.27 8.38 43.62 4.70
162 166 2.256591 AAGCACCACTGCAGCTTCG 61.257 57.895 15.27 1.09 44.67 3.79
163 167 1.285023 CAAGCACCACTGCAGCTTC 59.715 57.895 15.27 0.00 46.01 3.86
175 183 1.497722 GCTAGCCGAACACAAGCAC 59.502 57.895 2.29 0.00 33.38 4.40
179 187 2.047655 CGGGCTAGCCGAACACAA 60.048 61.111 27.24 0.00 36.85 3.33
280 399 2.147133 GCAAGACGACGACGAGCTC 61.147 63.158 15.32 2.73 42.66 4.09
340 494 0.787787 CGACCGCAGAATGAAACGAA 59.212 50.000 0.00 0.00 39.69 3.85
344 498 1.298157 CCAGCGACCGCAGAATGAAA 61.298 55.000 16.97 0.00 44.88 2.69
358 512 2.202987 GCTCCAGGATCACCAGCG 60.203 66.667 0.00 0.00 38.94 5.18
362 516 1.070445 CGATGGCTCCAGGATCACC 59.930 63.158 0.00 0.00 0.00 4.02
389 547 1.440938 TTCGGTTTTGGCTGTGGACG 61.441 55.000 0.00 0.00 0.00 4.79
423 581 5.131142 ACACATTAGCAGGCTATAAGGAGTT 59.869 40.000 1.24 0.00 0.00 3.01
427 585 3.990469 CGACACATTAGCAGGCTATAAGG 59.010 47.826 1.24 0.00 0.00 2.69
428 586 4.621991 ACGACACATTAGCAGGCTATAAG 58.378 43.478 1.24 0.00 0.00 1.73
429 587 4.098807 TGACGACACATTAGCAGGCTATAA 59.901 41.667 1.24 0.00 0.00 0.98
444 607 2.000447 GGTGCCTAGAAATGACGACAC 59.000 52.381 0.00 0.00 0.00 3.67
526 695 3.723235 GAGCGATCGAGCAGGCCAA 62.723 63.158 21.57 0.00 40.15 4.52
539 708 0.588737 CGAGATCAAGATCGGAGCGA 59.411 55.000 4.54 0.00 42.48 4.93
611 780 3.304257 GGCATCCAACGACAATGATGATC 60.304 47.826 0.00 0.00 37.40 2.92
613 782 2.016318 GGCATCCAACGACAATGATGA 58.984 47.619 0.00 0.00 37.40 2.92
614 783 1.744522 TGGCATCCAACGACAATGATG 59.255 47.619 0.00 0.00 38.08 3.07
618 787 5.596836 AAATAATGGCATCCAACGACAAT 57.403 34.783 0.00 0.00 36.95 2.71
619 788 5.398603 AAAATAATGGCATCCAACGACAA 57.601 34.783 0.00 0.00 36.95 3.18
622 791 4.464244 TGGAAAAATAATGGCATCCAACGA 59.536 37.500 0.00 0.00 36.95 3.85
624 793 5.528320 CCATGGAAAAATAATGGCATCCAAC 59.472 40.000 5.56 0.00 40.11 3.77
643 813 2.482796 TACCTGTGCAGCACCCATGG 62.483 60.000 23.06 19.56 32.73 3.66
644 814 1.002257 TACCTGTGCAGCACCCATG 60.002 57.895 23.06 10.62 32.73 3.66
645 815 1.300963 CTACCTGTGCAGCACCCAT 59.699 57.895 23.06 10.13 32.73 4.00
651 821 1.136500 GTACCTACCTACCTGTGCAGC 59.864 57.143 0.00 0.00 0.00 5.25
656 826 2.236395 ACGTACGTACCTACCTACCTGT 59.764 50.000 21.41 5.07 0.00 4.00
657 827 2.906354 ACGTACGTACCTACCTACCTG 58.094 52.381 21.41 4.45 0.00 4.00
756 1261 9.971922 GCACTAATCTTAAAGCCAATGATTTAT 57.028 29.630 0.00 0.00 32.78 1.40
757 1262 9.189156 AGCACTAATCTTAAAGCCAATGATTTA 57.811 29.630 0.00 0.00 31.44 1.40
758 1263 7.977853 CAGCACTAATCTTAAAGCCAATGATTT 59.022 33.333 0.00 0.00 33.93 2.17
772 1277 1.270839 ACGTGTGGCAGCACTAATCTT 60.271 47.619 14.98 0.00 37.24 2.40
822 1327 2.089980 AGAAGAACCATGCATGCAGTC 58.910 47.619 26.69 18.69 0.00 3.51
848 1358 1.766494 AGCAATCATTTCATGGCGGA 58.234 45.000 0.00 0.00 0.00 5.54
872 1393 1.144936 GAGCACGAAGGGAGGGATG 59.855 63.158 0.00 0.00 0.00 3.51
873 1394 1.002274 AGAGCACGAAGGGAGGGAT 59.998 57.895 0.00 0.00 0.00 3.85
875 1396 2.726351 GGAGAGCACGAAGGGAGGG 61.726 68.421 0.00 0.00 0.00 4.30
876 1397 2.726351 GGGAGAGCACGAAGGGAGG 61.726 68.421 0.00 0.00 0.00 4.30
877 1398 1.671901 GAGGGAGAGCACGAAGGGAG 61.672 65.000 0.00 0.00 0.00 4.30
878 1399 1.682684 GAGGGAGAGCACGAAGGGA 60.683 63.158 0.00 0.00 0.00 4.20
879 1400 1.984570 TGAGGGAGAGCACGAAGGG 60.985 63.158 0.00 0.00 0.00 3.95
880 1401 1.216710 GTGAGGGAGAGCACGAAGG 59.783 63.158 0.00 0.00 0.00 3.46
881 1402 0.172352 GAGTGAGGGAGAGCACGAAG 59.828 60.000 0.00 0.00 39.88 3.79
882 1403 1.251527 GGAGTGAGGGAGAGCACGAA 61.252 60.000 0.00 0.00 39.88 3.85
883 1404 1.679305 GGAGTGAGGGAGAGCACGA 60.679 63.158 0.00 0.00 39.88 4.35
884 1405 2.716017 GGGAGTGAGGGAGAGCACG 61.716 68.421 0.00 0.00 39.88 5.34
885 1406 0.980231 ATGGGAGTGAGGGAGAGCAC 60.980 60.000 0.00 0.00 35.30 4.40
886 1407 0.689080 GATGGGAGTGAGGGAGAGCA 60.689 60.000 0.00 0.00 0.00 4.26
887 1408 1.406860 GGATGGGAGTGAGGGAGAGC 61.407 65.000 0.00 0.00 0.00 4.09
888 1409 0.264359 AGGATGGGAGTGAGGGAGAG 59.736 60.000 0.00 0.00 0.00 3.20
889 1410 0.263172 GAGGATGGGAGTGAGGGAGA 59.737 60.000 0.00 0.00 0.00 3.71
890 1411 0.031716 TGAGGATGGGAGTGAGGGAG 60.032 60.000 0.00 0.00 0.00 4.30
891 1412 0.325671 GTGAGGATGGGAGTGAGGGA 60.326 60.000 0.00 0.00 0.00 4.20
892 1413 1.680522 CGTGAGGATGGGAGTGAGGG 61.681 65.000 0.00 0.00 0.00 4.30
893 1414 1.819229 CGTGAGGATGGGAGTGAGG 59.181 63.158 0.00 0.00 0.00 3.86
894 1415 1.142748 GCGTGAGGATGGGAGTGAG 59.857 63.158 0.00 0.00 0.00 3.51
895 1416 1.305297 AGCGTGAGGATGGGAGTGA 60.305 57.895 0.00 0.00 0.00 3.41
896 1417 1.142748 GAGCGTGAGGATGGGAGTG 59.857 63.158 0.00 0.00 0.00 3.51
897 1418 2.060980 GGAGCGTGAGGATGGGAGT 61.061 63.158 0.00 0.00 0.00 3.85
904 1425 2.710902 CCGTCATGGAGCGTGAGGA 61.711 63.158 0.00 0.00 42.00 3.71
948 1472 3.953612 ACTCGTGTTTATATACCGTGGGA 59.046 43.478 0.00 0.00 0.00 4.37
950 1474 3.970610 CGACTCGTGTTTATATACCGTGG 59.029 47.826 0.00 0.00 0.00 4.94
954 1478 4.036734 TGGGTCGACTCGTGTTTATATACC 59.963 45.833 16.46 3.16 0.00 2.73
1004 1532 2.115510 TCCATGGAGGACGACATCG 58.884 57.895 11.44 0.00 43.07 3.84
1611 2166 1.298157 TGGCGATCGAAGCAACCAAG 61.298 55.000 21.57 0.00 36.08 3.61
1614 2169 1.089481 TCATGGCGATCGAAGCAACC 61.089 55.000 21.57 9.87 36.08 3.77
1615 2170 0.940126 ATCATGGCGATCGAAGCAAC 59.060 50.000 21.57 0.00 36.08 4.17
1624 2240 2.603021 ACAGTAGGAGATCATGGCGAT 58.397 47.619 0.00 0.00 36.91 4.58
1633 2249 5.087323 TCTTCACCAAGAACAGTAGGAGAT 58.913 41.667 0.00 0.00 35.57 2.75
1634 2250 4.480115 TCTTCACCAAGAACAGTAGGAGA 58.520 43.478 0.00 0.00 35.57 3.71
1635 2251 4.873746 TCTTCACCAAGAACAGTAGGAG 57.126 45.455 0.00 0.00 35.57 3.69
1637 2253 3.748568 GCTTCTTCACCAAGAACAGTAGG 59.251 47.826 0.00 0.00 42.66 3.18
1640 2256 2.092429 TGGCTTCTTCACCAAGAACAGT 60.092 45.455 0.00 0.00 42.66 3.55
1643 2259 2.576615 ACTGGCTTCTTCACCAAGAAC 58.423 47.619 0.00 0.00 42.66 3.01
1658 2274 9.508567 GACAAAAATCTAAATCATCTTACTGGC 57.491 33.333 0.00 0.00 0.00 4.85
1659 2275 9.708222 CGACAAAAATCTAAATCATCTTACTGG 57.292 33.333 0.00 0.00 0.00 4.00
1662 2278 9.000018 GCACGACAAAAATCTAAATCATCTTAC 58.000 33.333 0.00 0.00 0.00 2.34
1663 2279 7.902917 CGCACGACAAAAATCTAAATCATCTTA 59.097 33.333 0.00 0.00 0.00 2.10
1664 2280 6.742718 CGCACGACAAAAATCTAAATCATCTT 59.257 34.615 0.00 0.00 0.00 2.40
1665 2281 6.128282 ACGCACGACAAAAATCTAAATCATCT 60.128 34.615 0.00 0.00 0.00 2.90
1666 2282 6.021596 ACGCACGACAAAAATCTAAATCATC 58.978 36.000 0.00 0.00 0.00 2.92
1667 2283 5.794945 CACGCACGACAAAAATCTAAATCAT 59.205 36.000 0.00 0.00 0.00 2.45
1669 2285 4.029087 GCACGCACGACAAAAATCTAAATC 59.971 41.667 0.00 0.00 0.00 2.17
1670 2286 3.911964 GCACGCACGACAAAAATCTAAAT 59.088 39.130 0.00 0.00 0.00 1.40
1671 2287 3.293262 GCACGCACGACAAAAATCTAAA 58.707 40.909 0.00 0.00 0.00 1.85
1672 2288 2.350007 GGCACGCACGACAAAAATCTAA 60.350 45.455 0.00 0.00 0.00 2.10
1676 2292 4.626225 GGCACGCACGACAAAAAT 57.374 50.000 0.00 0.00 0.00 1.82
1689 2305 1.436600 CTCCATCATATCTGCGGCAC 58.563 55.000 0.00 0.00 0.00 5.01
1693 2325 2.827800 ACACCTCCATCATATCTGCG 57.172 50.000 0.00 0.00 0.00 5.18
1785 2417 4.202090 CCTCCAATCAAATCAAAGCTAGCC 60.202 45.833 12.13 0.00 0.00 3.93
1813 2468 2.176369 CATGTAAAAAGATGCACCGCG 58.824 47.619 0.00 0.00 0.00 6.46
1835 2490 7.282450 ACGATCACCAAGAACTTTTAGAAACTT 59.718 33.333 0.00 0.00 0.00 2.66
1836 2491 6.766467 ACGATCACCAAGAACTTTTAGAAACT 59.234 34.615 0.00 0.00 0.00 2.66
1839 2494 6.017440 CCAACGATCACCAAGAACTTTTAGAA 60.017 38.462 0.00 0.00 0.00 2.10
1843 2498 3.243401 GCCAACGATCACCAAGAACTTTT 60.243 43.478 0.00 0.00 0.00 2.27
1844 2499 2.293399 GCCAACGATCACCAAGAACTTT 59.707 45.455 0.00 0.00 0.00 2.66
1848 2503 1.522668 CTGCCAACGATCACCAAGAA 58.477 50.000 0.00 0.00 0.00 2.52
1849 2504 0.321564 CCTGCCAACGATCACCAAGA 60.322 55.000 0.00 0.00 0.00 3.02
1850 2505 0.606401 ACCTGCCAACGATCACCAAG 60.606 55.000 0.00 0.00 0.00 3.61
1851 2506 0.179004 AACCTGCCAACGATCACCAA 60.179 50.000 0.00 0.00 0.00 3.67
1852 2507 0.605319 GAACCTGCCAACGATCACCA 60.605 55.000 0.00 0.00 0.00 4.17
1853 2508 1.635663 CGAACCTGCCAACGATCACC 61.636 60.000 0.00 0.00 0.00 4.02
1854 2509 1.787847 CGAACCTGCCAACGATCAC 59.212 57.895 0.00 0.00 0.00 3.06
1856 2511 2.785258 GCGAACCTGCCAACGATC 59.215 61.111 0.00 0.00 0.00 3.69
1857 2512 3.118454 CGCGAACCTGCCAACGAT 61.118 61.111 0.00 0.00 0.00 3.73
1858 2513 4.287781 TCGCGAACCTGCCAACGA 62.288 61.111 6.20 0.00 0.00 3.85
1859 2514 3.777925 CTCGCGAACCTGCCAACG 61.778 66.667 11.33 0.00 0.00 4.10
1861 2516 4.697756 CCCTCGCGAACCTGCCAA 62.698 66.667 11.33 0.00 0.00 4.52
1992 2657 1.439679 GTCCACCCACAGATTCGTTC 58.560 55.000 0.00 0.00 0.00 3.95
1996 2661 1.745489 GCCGTCCACCCACAGATTC 60.745 63.158 0.00 0.00 0.00 2.52
2009 2674 2.027625 CAGGGAGAAACGTGCCGTC 61.028 63.158 0.00 0.00 39.99 4.79
2151 2821 0.660005 CAACGGCGACAAACACCATG 60.660 55.000 16.62 0.00 0.00 3.66
2154 2824 1.298041 CACAACGGCGACAAACACC 60.298 57.895 16.62 0.00 0.00 4.16
2201 2871 3.688414 GCATATGCTTAAGGGGACAAGGT 60.688 47.826 20.64 0.00 38.21 3.50
2205 2875 1.144913 GGGCATATGCTTAAGGGGACA 59.855 52.381 26.12 0.00 41.70 4.02
2206 2876 1.882352 CGGGCATATGCTTAAGGGGAC 60.882 57.143 26.12 6.93 41.70 4.46
2207 2877 0.400213 CGGGCATATGCTTAAGGGGA 59.600 55.000 26.12 0.00 41.70 4.81
2211 2881 2.032054 CACACACGGGCATATGCTTAAG 59.968 50.000 26.12 16.61 41.70 1.85
2213 2883 1.662517 CACACACGGGCATATGCTTA 58.337 50.000 26.12 0.00 41.70 3.09
2215 2885 2.114670 GCACACACGGGCATATGCT 61.115 57.895 26.12 4.80 41.70 3.79
2216 2886 2.114670 AGCACACACGGGCATATGC 61.115 57.895 19.79 19.79 41.14 3.14
2217 2887 1.723273 CAGCACACACGGGCATATG 59.277 57.895 0.00 0.00 0.00 1.78
2218 2888 2.114670 GCAGCACACACGGGCATAT 61.115 57.895 0.00 0.00 0.00 1.78
2219 2889 2.745884 GCAGCACACACGGGCATA 60.746 61.111 0.00 0.00 0.00 3.14
2277 2947 1.154338 CGTGACCGACCGACAGTAC 60.154 63.158 0.00 0.00 35.63 2.73
2278 2948 2.327343 CCGTGACCGACCGACAGTA 61.327 63.158 0.00 0.00 35.63 2.74
2283 2953 3.229156 AAATGCCGTGACCGACCGA 62.229 57.895 0.00 0.00 35.63 4.69
2284 2954 2.736682 GAAATGCCGTGACCGACCG 61.737 63.158 0.00 0.00 35.63 4.79
2285 2955 2.396157 GGAAATGCCGTGACCGACC 61.396 63.158 0.00 0.00 35.63 4.79
2296 2966 1.758862 CAATTCCTCCCTGGGAAATGC 59.241 52.381 17.81 0.00 46.73 3.56
2319 2989 6.884832 ACGGAAGGATATTGTAATGAGACAA 58.115 36.000 0.00 0.00 43.23 3.18
2322 2992 6.183360 ACGAACGGAAGGATATTGTAATGAGA 60.183 38.462 0.00 0.00 0.00 3.27
2337 3007 3.479269 GCGAGCCACGAACGGAAG 61.479 66.667 5.11 0.00 45.77 3.46
2379 3049 2.021039 CGCACCGGCCATGTTTTTG 61.021 57.895 0.00 0.00 36.38 2.44
2423 3101 0.616891 GTAACAAGGGACGGTGGGAT 59.383 55.000 0.00 0.00 0.00 3.85
2438 3116 4.954442 GCAAAACGAGGACACTATGTAAC 58.046 43.478 0.00 0.00 0.00 2.50
2544 3285 8.367911 ACATCTTATAATAGCGAACAGATGGAA 58.632 33.333 10.23 0.00 40.24 3.53
2604 3345 4.881273 AGTGAACAAACACACTAGATTGCA 59.119 37.500 0.00 0.00 44.06 4.08
2605 3346 5.007626 TGAGTGAACAAACACACTAGATTGC 59.992 40.000 0.00 0.00 45.54 3.56
2606 3347 6.603237 TGAGTGAACAAACACACTAGATTG 57.397 37.500 0.00 0.00 45.54 2.67
2608 3349 7.498900 TGAAATGAGTGAACAAACACACTAGAT 59.501 33.333 0.00 0.00 45.54 1.98
2610 3351 7.015226 TGAAATGAGTGAACAAACACACTAG 57.985 36.000 0.00 0.00 45.54 2.57
2679 3432 4.723789 ACCATTCATACTCCCTCTGTTCAT 59.276 41.667 0.00 0.00 0.00 2.57
2684 3437 4.202264 GGTGTACCATTCATACTCCCTCTG 60.202 50.000 0.00 0.00 32.40 3.35
2688 3441 4.772886 AAGGTGTACCATTCATACTCCC 57.227 45.455 3.56 0.00 37.04 4.30
2812 3612 2.035961 GCCATCTAGATGTTCTGCCGTA 59.964 50.000 27.03 0.00 37.11 4.02
2836 3699 2.037772 TGTTTTTGTGCTTGGTTGTGGT 59.962 40.909 0.00 0.00 0.00 4.16
2861 3790 7.533289 AGATTAAGGGAGATAGAGTAGTTGC 57.467 40.000 0.00 0.00 0.00 4.17
2976 4017 7.277760 GCAAGCGGTTCATCCTTAATTAAAAAT 59.722 33.333 0.00 0.00 0.00 1.82
2996 4037 4.093952 CCTGGCACGAAGCAAGCG 62.094 66.667 6.91 0.00 43.40 4.68
3617 4722 5.199024 TGAACCAATTGTTTCAGTGATGG 57.801 39.130 13.79 6.64 37.29 3.51
3630 4735 6.435904 TCCGGAAAGAATGTATTGAACCAATT 59.564 34.615 0.00 0.00 35.54 2.32
3636 4741 6.176896 TGACATCCGGAAAGAATGTATTGAA 58.823 36.000 9.01 0.00 0.00 2.69
3637 4742 5.739959 TGACATCCGGAAAGAATGTATTGA 58.260 37.500 9.01 0.00 0.00 2.57
3642 4747 5.982890 AAAATGACATCCGGAAAGAATGT 57.017 34.783 9.01 8.03 0.00 2.71
3736 4848 2.555757 GCAGAGAAAATGCCACTTGAGT 59.444 45.455 0.00 0.00 37.73 3.41
3745 4864 2.165845 AGATGCCAAGCAGAGAAAATGC 59.834 45.455 0.00 0.00 43.65 3.56
3756 4875 4.773323 AGACAAGTTAAAGATGCCAAGC 57.227 40.909 0.00 0.00 0.00 4.01
3776 4895 0.611896 CCCCTTGGTGTTGCCCTTAG 60.612 60.000 0.00 0.00 36.04 2.18
3798 4917 1.161563 TTTCTGCGTCCGTTTGGGTC 61.162 55.000 0.00 0.00 37.00 4.46
3802 4921 0.655733 ACACTTTCTGCGTCCGTTTG 59.344 50.000 0.00 0.00 0.00 2.93
3831 4950 1.350351 GCCTATCTGTCTGGCCATCAT 59.650 52.381 5.51 0.00 40.71 2.45
3833 4952 0.320247 CGCCTATCTGTCTGGCCATC 60.320 60.000 5.51 3.08 43.42 3.51
3834 4953 1.050988 ACGCCTATCTGTCTGGCCAT 61.051 55.000 5.51 0.00 43.42 4.40
3835 4954 1.676678 GACGCCTATCTGTCTGGCCA 61.677 60.000 4.71 4.71 43.42 5.36
3836 4955 1.068250 GACGCCTATCTGTCTGGCC 59.932 63.158 0.00 0.00 43.42 5.36
3837 4956 1.068250 GGACGCCTATCTGTCTGGC 59.932 63.158 0.00 0.00 42.94 4.85
3838 4957 1.000283 GATGGACGCCTATCTGTCTGG 60.000 57.143 0.00 0.00 35.45 3.86
3839 4958 1.000283 GGATGGACGCCTATCTGTCTG 60.000 57.143 0.00 0.00 35.45 3.51
3847 4968 1.048724 CCTCCTTGGATGGACGCCTA 61.049 60.000 0.00 0.00 38.35 3.93
3851 4972 2.292267 CAATTCCTCCTTGGATGGACG 58.708 52.381 7.16 0.00 45.68 4.79
3862 4983 0.182299 CCAGGCTCTCCAATTCCTCC 59.818 60.000 0.00 0.00 33.74 4.30
3881 5002 5.812642 TCATTACCAGATCGAGCTTTTCTTC 59.187 40.000 0.00 0.00 0.00 2.87
3889 5010 5.233225 TGATCAATCATTACCAGATCGAGC 58.767 41.667 0.00 0.00 38.28 5.03
3926 5047 5.570205 TCACCCCAACAAAGAATACACTA 57.430 39.130 0.00 0.00 0.00 2.74
3931 5052 4.991776 TCACATCACCCCAACAAAGAATA 58.008 39.130 0.00 0.00 0.00 1.75
3982 5103 9.821662 GTGGTTTAAATTTCTGATGTACAGTAC 57.178 33.333 0.33 3.49 45.86 2.73
3987 5108 7.222000 TGGGTGGTTTAAATTTCTGATGTAC 57.778 36.000 0.00 0.00 0.00 2.90
3988 5109 7.841282 TTGGGTGGTTTAAATTTCTGATGTA 57.159 32.000 0.00 0.00 0.00 2.29
3989 5110 6.739331 TTGGGTGGTTTAAATTTCTGATGT 57.261 33.333 0.00 0.00 0.00 3.06
3990 5111 7.171337 CACTTTGGGTGGTTTAAATTTCTGATG 59.829 37.037 0.00 0.00 41.90 3.07
3991 5112 7.216494 CACTTTGGGTGGTTTAAATTTCTGAT 58.784 34.615 0.00 0.00 41.90 2.90
4016 5137 4.009675 TGTCTTCCAAACCATAGTGATGC 58.990 43.478 0.00 0.00 0.00 3.91
4048 5413 3.245518 AGCAAAACCCTTGTGTTTCAC 57.754 42.857 0.00 0.00 37.46 3.18
4072 5437 9.046296 GGTATTGACTCTGTCCATAAACATTAG 57.954 37.037 0.00 0.00 0.00 1.73
4114 5479 3.006752 TCACCAATGTCAAAATGCCTTCC 59.993 43.478 0.00 0.00 0.00 3.46
4173 5706 5.128919 AGAACAGATGCTTGTTTGTCTCTT 58.871 37.500 3.90 0.00 41.15 2.85
4222 5755 6.070881 CCCAGTGGATATGAATTTTGTTCCAA 60.071 38.462 11.95 0.00 35.19 3.53
4282 5815 1.687368 GCTGATGATTCCCTTTGGGCT 60.687 52.381 0.00 0.00 43.94 5.19
4290 5823 0.849417 AAGAGGGGCTGATGATTCCC 59.151 55.000 0.00 0.00 39.67 3.97
4310 5846 5.927689 TGCTGCCAAAATAACATTCTCTTTG 59.072 36.000 0.00 0.00 0.00 2.77
4318 5854 4.020396 TGTTCCATGCTGCCAAAATAACAT 60.020 37.500 0.00 0.00 0.00 2.71
4392 6197 9.349713 CCTCTCCTACCTCTATACAATATCATC 57.650 40.741 0.00 0.00 0.00 2.92
4393 6198 8.851876 ACCTCTCCTACCTCTATACAATATCAT 58.148 37.037 0.00 0.00 0.00 2.45
4394 6199 8.110271 CACCTCTCCTACCTCTATACAATATCA 58.890 40.741 0.00 0.00 0.00 2.15
4395 6200 8.110908 ACACCTCTCCTACCTCTATACAATATC 58.889 40.741 0.00 0.00 0.00 1.63
4396 6201 8.002431 ACACCTCTCCTACCTCTATACAATAT 57.998 38.462 0.00 0.00 0.00 1.28
4397 6202 7.403837 ACACCTCTCCTACCTCTATACAATA 57.596 40.000 0.00 0.00 0.00 1.90
4398 6203 6.282568 ACACCTCTCCTACCTCTATACAAT 57.717 41.667 0.00 0.00 0.00 2.71
4399 6204 5.728937 ACACCTCTCCTACCTCTATACAA 57.271 43.478 0.00 0.00 0.00 2.41
4400 6205 5.728937 AACACCTCTCCTACCTCTATACA 57.271 43.478 0.00 0.00 0.00 2.29
4401 6206 8.412456 GTTTAAACACCTCTCCTACCTCTATAC 58.588 40.741 13.51 0.00 0.00 1.47
4402 6207 7.562821 GGTTTAAACACCTCTCCTACCTCTATA 59.437 40.741 19.57 0.00 33.50 1.31
4403 6208 6.383436 GGTTTAAACACCTCTCCTACCTCTAT 59.617 42.308 19.57 0.00 33.50 1.98
4404 6209 5.718607 GGTTTAAACACCTCTCCTACCTCTA 59.281 44.000 19.57 0.00 33.50 2.43
4405 6210 4.531339 GGTTTAAACACCTCTCCTACCTCT 59.469 45.833 19.57 0.00 33.50 3.69
4406 6211 4.531339 AGGTTTAAACACCTCTCCTACCTC 59.469 45.833 19.57 0.00 44.63 3.85
4407 6212 4.500452 AGGTTTAAACACCTCTCCTACCT 58.500 43.478 19.57 1.11 44.63 3.08
4408 6213 4.904895 AGGTTTAAACACCTCTCCTACC 57.095 45.455 19.57 0.00 44.63 3.18
4426 6231 9.487442 AGAAGAAGAGATAGAAAGATACAAGGT 57.513 33.333 0.00 0.00 0.00 3.50
4427 6232 9.748708 CAGAAGAAGAGATAGAAAGATACAAGG 57.251 37.037 0.00 0.00 0.00 3.61
4434 6239 9.915629 GTTACAACAGAAGAAGAGATAGAAAGA 57.084 33.333 0.00 0.00 0.00 2.52
4435 6240 9.921637 AGTTACAACAGAAGAAGAGATAGAAAG 57.078 33.333 0.00 0.00 0.00 2.62
4437 6242 9.915629 GAAGTTACAACAGAAGAAGAGATAGAA 57.084 33.333 0.00 0.00 0.00 2.10
4438 6243 8.524487 GGAAGTTACAACAGAAGAAGAGATAGA 58.476 37.037 0.00 0.00 0.00 1.98
4439 6244 7.762159 GGGAAGTTACAACAGAAGAAGAGATAG 59.238 40.741 0.00 0.00 0.00 2.08
4440 6245 7.310485 GGGGAAGTTACAACAGAAGAAGAGATA 60.310 40.741 0.00 0.00 0.00 1.98
4441 6246 6.468543 GGGAAGTTACAACAGAAGAAGAGAT 58.531 40.000 0.00 0.00 0.00 2.75
4442 6247 5.221661 GGGGAAGTTACAACAGAAGAAGAGA 60.222 44.000 0.00 0.00 0.00 3.10
4443 6248 4.998033 GGGGAAGTTACAACAGAAGAAGAG 59.002 45.833 0.00 0.00 0.00 2.85
4444 6249 4.410883 TGGGGAAGTTACAACAGAAGAAGA 59.589 41.667 0.00 0.00 0.00 2.87
4445 6250 4.714632 TGGGGAAGTTACAACAGAAGAAG 58.285 43.478 0.00 0.00 0.00 2.85
4446 6251 4.781775 TGGGGAAGTTACAACAGAAGAA 57.218 40.909 0.00 0.00 0.00 2.52
4447 6252 4.781775 TTGGGGAAGTTACAACAGAAGA 57.218 40.909 0.00 0.00 0.00 2.87
4448 6253 5.316987 AGATTGGGGAAGTTACAACAGAAG 58.683 41.667 0.00 0.00 0.00 2.85
4449 6254 5.313712 GAGATTGGGGAAGTTACAACAGAA 58.686 41.667 0.00 0.00 0.00 3.02
4450 6255 4.263331 GGAGATTGGGGAAGTTACAACAGA 60.263 45.833 0.00 0.00 0.00 3.41
4451 6256 4.010349 GGAGATTGGGGAAGTTACAACAG 58.990 47.826 0.00 0.00 0.00 3.16
4452 6257 3.655777 AGGAGATTGGGGAAGTTACAACA 59.344 43.478 0.00 0.00 0.00 3.33
4453 6258 4.010349 CAGGAGATTGGGGAAGTTACAAC 58.990 47.826 0.00 0.00 0.00 3.32
4454 6259 3.655777 ACAGGAGATTGGGGAAGTTACAA 59.344 43.478 0.00 0.00 0.00 2.41
4455 6260 3.256704 ACAGGAGATTGGGGAAGTTACA 58.743 45.455 0.00 0.00 0.00 2.41
4456 6261 5.183969 GTTACAGGAGATTGGGGAAGTTAC 58.816 45.833 0.00 0.00 0.00 2.50
4457 6262 4.081309 CGTTACAGGAGATTGGGGAAGTTA 60.081 45.833 0.00 0.00 0.00 2.24
4458 6263 3.307480 CGTTACAGGAGATTGGGGAAGTT 60.307 47.826 0.00 0.00 0.00 2.66
4459 6264 2.236395 CGTTACAGGAGATTGGGGAAGT 59.764 50.000 0.00 0.00 0.00 3.01
4460 6265 2.500098 TCGTTACAGGAGATTGGGGAAG 59.500 50.000 0.00 0.00 0.00 3.46
4461 6266 2.542550 TCGTTACAGGAGATTGGGGAA 58.457 47.619 0.00 0.00 0.00 3.97
4462 6267 2.241281 TCGTTACAGGAGATTGGGGA 57.759 50.000 0.00 0.00 0.00 4.81
4463 6268 2.434336 TGATCGTTACAGGAGATTGGGG 59.566 50.000 0.00 0.00 0.00 4.96
4464 6269 3.458189 GTGATCGTTACAGGAGATTGGG 58.542 50.000 0.00 0.00 0.00 4.12
4465 6270 3.116300 CGTGATCGTTACAGGAGATTGG 58.884 50.000 0.00 0.00 0.00 3.16
4466 6271 4.028852 TCGTGATCGTTACAGGAGATTG 57.971 45.455 0.00 0.00 38.33 2.67
4467 6272 4.861210 GATCGTGATCGTTACAGGAGATT 58.139 43.478 0.00 0.00 36.02 2.40
4468 6273 4.491234 GATCGTGATCGTTACAGGAGAT 57.509 45.455 0.00 0.00 36.02 2.75
4469 6274 3.965292 GATCGTGATCGTTACAGGAGA 57.035 47.619 0.00 0.00 36.02 3.71
4480 6285 3.485051 CGATGAGGAGATCGATCGTGATC 60.485 52.174 19.33 14.89 46.72 2.92
4481 6286 2.418280 CGATGAGGAGATCGATCGTGAT 59.582 50.000 19.33 8.24 46.72 3.06
4482 6287 1.801178 CGATGAGGAGATCGATCGTGA 59.199 52.381 19.33 3.60 46.72 4.35
4483 6288 2.239751 CGATGAGGAGATCGATCGTG 57.760 55.000 19.33 1.55 46.72 4.35
4489 6294 3.501828 ACAAGAGATCGATGAGGAGATCG 59.498 47.826 0.54 0.00 45.68 3.69
4490 6295 6.567687 TTACAAGAGATCGATGAGGAGATC 57.432 41.667 0.54 0.00 42.52 2.75
4491 6296 5.048083 GCTTACAAGAGATCGATGAGGAGAT 60.048 44.000 0.54 0.00 0.00 2.75
4492 6297 4.277174 GCTTACAAGAGATCGATGAGGAGA 59.723 45.833 0.54 0.00 0.00 3.71
4493 6298 4.545610 GCTTACAAGAGATCGATGAGGAG 58.454 47.826 0.54 0.00 0.00 3.69
4494 6299 3.319405 GGCTTACAAGAGATCGATGAGGA 59.681 47.826 0.54 0.00 0.00 3.71
4495 6300 3.068732 TGGCTTACAAGAGATCGATGAGG 59.931 47.826 0.54 0.00 0.00 3.86
4496 6301 4.047822 GTGGCTTACAAGAGATCGATGAG 58.952 47.826 0.54 0.00 0.00 2.90
4497 6302 3.489229 CGTGGCTTACAAGAGATCGATGA 60.489 47.826 0.54 0.00 0.00 2.92
4498 6303 2.791560 CGTGGCTTACAAGAGATCGATG 59.208 50.000 0.54 0.00 0.00 3.84
4499 6304 2.223829 CCGTGGCTTACAAGAGATCGAT 60.224 50.000 0.00 0.00 0.00 3.59
4500 6305 1.134367 CCGTGGCTTACAAGAGATCGA 59.866 52.381 0.00 0.00 0.00 3.59
4501 6306 1.560923 CCGTGGCTTACAAGAGATCG 58.439 55.000 0.00 0.00 0.00 3.69
4502 6307 1.291132 GCCGTGGCTTACAAGAGATC 58.709 55.000 2.98 0.00 38.26 2.75
4503 6308 0.613260 TGCCGTGGCTTACAAGAGAT 59.387 50.000 12.84 0.00 42.51 2.75
4504 6309 0.320421 GTGCCGTGGCTTACAAGAGA 60.320 55.000 12.84 0.00 42.51 3.10
4505 6310 0.602638 TGTGCCGTGGCTTACAAGAG 60.603 55.000 12.84 0.00 42.51 2.85
4506 6311 0.036164 ATGTGCCGTGGCTTACAAGA 59.964 50.000 12.84 0.00 42.51 3.02
4507 6312 1.732941 TATGTGCCGTGGCTTACAAG 58.267 50.000 12.84 0.00 42.51 3.16
4508 6313 2.013400 CATATGTGCCGTGGCTTACAA 58.987 47.619 12.84 1.48 42.51 2.41
4509 6314 1.208293 TCATATGTGCCGTGGCTTACA 59.792 47.619 12.84 9.40 42.51 2.41
4510 6315 1.948104 TCATATGTGCCGTGGCTTAC 58.052 50.000 12.84 3.37 42.51 2.34
4511 6316 2.928801 ATCATATGTGCCGTGGCTTA 57.071 45.000 12.84 1.19 42.51 3.09
4512 6317 2.928801 TATCATATGTGCCGTGGCTT 57.071 45.000 12.84 0.00 42.51 4.35
4513 6318 4.551702 TTATATCATATGTGCCGTGGCT 57.448 40.909 12.84 0.00 42.51 4.75
4514 6319 5.818136 ATTTATATCATATGTGCCGTGGC 57.182 39.130 3.30 3.30 42.35 5.01
4515 6320 9.981114 TCTATATTTATATCATATGTGCCGTGG 57.019 33.333 1.90 0.00 0.00 4.94
4522 6327 9.658799 GGCCGCATCTATATTTATATCATATGT 57.341 33.333 1.90 0.00 0.00 2.29
4523 6328 9.102757 GGGCCGCATCTATATTTATATCATATG 57.897 37.037 0.00 0.00 0.00 1.78
4524 6329 7.981789 CGGGCCGCATCTATATTTATATCATAT 59.018 37.037 15.42 0.00 0.00 1.78
4525 6330 7.177744 TCGGGCCGCATCTATATTTATATCATA 59.822 37.037 23.83 0.00 0.00 2.15
4526 6331 6.014584 TCGGGCCGCATCTATATTTATATCAT 60.015 38.462 23.83 0.00 0.00 2.45
4527 6332 5.303333 TCGGGCCGCATCTATATTTATATCA 59.697 40.000 23.83 0.00 0.00 2.15
4528 6333 5.779922 TCGGGCCGCATCTATATTTATATC 58.220 41.667 23.83 0.00 0.00 1.63
4529 6334 5.784177 CTCGGGCCGCATCTATATTTATAT 58.216 41.667 23.83 0.00 0.00 0.86
4530 6335 4.500887 GCTCGGGCCGCATCTATATTTATA 60.501 45.833 23.83 0.00 0.00 0.98
4531 6336 3.741388 GCTCGGGCCGCATCTATATTTAT 60.741 47.826 23.83 0.00 0.00 1.40
4532 6337 2.418197 GCTCGGGCCGCATCTATATTTA 60.418 50.000 23.83 0.00 0.00 1.40
4533 6338 1.676014 GCTCGGGCCGCATCTATATTT 60.676 52.381 23.83 0.00 0.00 1.40
4534 6339 0.108138 GCTCGGGCCGCATCTATATT 60.108 55.000 23.83 0.00 0.00 1.28
4535 6340 1.257750 TGCTCGGGCCGCATCTATAT 61.258 55.000 23.83 0.00 37.74 0.86
4536 6341 1.468506 TTGCTCGGGCCGCATCTATA 61.469 55.000 23.83 0.00 37.22 1.31
4537 6342 2.324014 TTTGCTCGGGCCGCATCTAT 62.324 55.000 23.83 0.00 37.22 1.98
4538 6343 2.923426 CTTTGCTCGGGCCGCATCTA 62.923 60.000 23.83 1.73 37.22 1.98
4539 6344 4.408821 TTTGCTCGGGCCGCATCT 62.409 61.111 23.83 0.00 37.22 2.90
4540 6345 3.880846 CTTTGCTCGGGCCGCATC 61.881 66.667 23.83 12.91 37.22 3.91
4545 6350 3.062466 GAACCCTTTGCTCGGGCC 61.062 66.667 3.94 0.00 46.04 5.80
4546 6351 1.901464 TTGAACCCTTTGCTCGGGC 60.901 57.895 0.00 0.00 46.04 6.13
4548 6353 1.574428 CGTTGAACCCTTTGCTCGG 59.426 57.895 0.00 0.00 0.00 4.63
4549 6354 1.082104 GCGTTGAACCCTTTGCTCG 60.082 57.895 0.00 0.00 0.00 5.03
4550 6355 0.668535 AAGCGTTGAACCCTTTGCTC 59.331 50.000 0.00 0.00 0.00 4.26
4551 6356 0.668535 GAAGCGTTGAACCCTTTGCT 59.331 50.000 0.00 0.00 0.00 3.91
4552 6357 0.318699 GGAAGCGTTGAACCCTTTGC 60.319 55.000 0.00 0.00 0.00 3.68
4553 6358 1.028905 TGGAAGCGTTGAACCCTTTG 58.971 50.000 0.00 0.00 0.00 2.77
4554 6359 1.886542 GATGGAAGCGTTGAACCCTTT 59.113 47.619 0.00 0.00 0.00 3.11
4555 6360 1.534729 GATGGAAGCGTTGAACCCTT 58.465 50.000 0.00 0.00 0.00 3.95
4556 6361 0.673644 CGATGGAAGCGTTGAACCCT 60.674 55.000 0.00 0.00 43.21 4.34
4557 6362 1.794222 CGATGGAAGCGTTGAACCC 59.206 57.895 0.00 0.00 43.21 4.11
4566 6371 2.030457 CCATGTAAACGTCGATGGAAGC 59.970 50.000 9.90 0.00 38.10 3.86
4567 6372 3.259064 ACCATGTAAACGTCGATGGAAG 58.741 45.455 14.82 0.00 38.10 3.46
4568 6373 3.322211 ACCATGTAAACGTCGATGGAA 57.678 42.857 14.82 0.00 38.10 3.53
4569 6374 4.175516 GTTACCATGTAAACGTCGATGGA 58.824 43.478 14.82 0.00 38.10 3.41
4570 6375 3.927758 TGTTACCATGTAAACGTCGATGG 59.072 43.478 9.90 3.63 41.11 3.51
4571 6376 4.860352 TCTGTTACCATGTAAACGTCGATG 59.140 41.667 2.26 2.26 0.00 3.84
4572 6377 5.063180 TCTGTTACCATGTAAACGTCGAT 57.937 39.130 0.00 0.00 0.00 3.59
4573 6378 4.478699 CTCTGTTACCATGTAAACGTCGA 58.521 43.478 0.00 0.00 0.00 4.20
4574 6379 3.060363 GCTCTGTTACCATGTAAACGTCG 59.940 47.826 0.00 0.00 0.00 5.12
4575 6380 3.370061 GGCTCTGTTACCATGTAAACGTC 59.630 47.826 0.00 0.00 0.00 4.34
4576 6381 3.007614 AGGCTCTGTTACCATGTAAACGT 59.992 43.478 0.00 0.00 0.00 3.99
4577 6382 3.596214 AGGCTCTGTTACCATGTAAACG 58.404 45.455 0.00 0.00 0.00 3.60
4578 6383 4.833390 AGAGGCTCTGTTACCATGTAAAC 58.167 43.478 17.96 0.00 0.00 2.01
4579 6384 5.488341 GAAGAGGCTCTGTTACCATGTAAA 58.512 41.667 19.53 0.00 0.00 2.01
4580 6385 4.081087 GGAAGAGGCTCTGTTACCATGTAA 60.081 45.833 19.53 0.00 0.00 2.41
4581 6386 3.451178 GGAAGAGGCTCTGTTACCATGTA 59.549 47.826 19.53 0.00 0.00 2.29
4582 6387 2.237392 GGAAGAGGCTCTGTTACCATGT 59.763 50.000 19.53 0.00 0.00 3.21
4583 6388 2.503356 AGGAAGAGGCTCTGTTACCATG 59.497 50.000 19.53 0.00 0.00 3.66
4584 6389 2.769095 GAGGAAGAGGCTCTGTTACCAT 59.231 50.000 19.53 0.00 0.00 3.55
4585 6390 2.180276 GAGGAAGAGGCTCTGTTACCA 58.820 52.381 19.53 0.00 0.00 3.25
4586 6391 1.135333 CGAGGAAGAGGCTCTGTTACC 59.865 57.143 19.53 17.86 0.00 2.85
4587 6392 2.093106 TCGAGGAAGAGGCTCTGTTAC 58.907 52.381 19.53 3.72 0.00 2.50
4588 6393 2.509166 TCGAGGAAGAGGCTCTGTTA 57.491 50.000 19.53 0.00 0.00 2.41
4589 6394 1.859302 ATCGAGGAAGAGGCTCTGTT 58.141 50.000 19.53 2.40 0.00 3.16
4590 6395 2.738587 TATCGAGGAAGAGGCTCTGT 57.261 50.000 19.53 8.35 0.00 3.41
4591 6396 2.955660 ACTTATCGAGGAAGAGGCTCTG 59.044 50.000 19.53 5.02 0.00 3.35
4592 6397 3.306472 ACTTATCGAGGAAGAGGCTCT 57.694 47.619 12.24 12.24 0.00 4.09
4593 6398 3.491792 CCAACTTATCGAGGAAGAGGCTC 60.492 52.174 14.91 6.34 0.00 4.70
4594 6399 2.432510 CCAACTTATCGAGGAAGAGGCT 59.567 50.000 14.91 0.00 0.00 4.58
4595 6400 2.431057 TCCAACTTATCGAGGAAGAGGC 59.569 50.000 14.91 0.00 0.00 4.70
4596 6401 4.946478 ATCCAACTTATCGAGGAAGAGG 57.054 45.455 14.91 14.57 33.17 3.69
4597 6402 6.712998 TCTCTATCCAACTTATCGAGGAAGAG 59.287 42.308 14.91 14.90 37.09 2.85
4598 6403 6.602278 TCTCTATCCAACTTATCGAGGAAGA 58.398 40.000 14.91 8.18 33.17 2.87
4599 6404 6.885952 TCTCTATCCAACTTATCGAGGAAG 57.114 41.667 8.03 8.03 33.17 3.46
4600 6405 6.149640 CGATCTCTATCCAACTTATCGAGGAA 59.850 42.308 0.00 0.00 37.52 3.36
4601 6406 5.644206 CGATCTCTATCCAACTTATCGAGGA 59.356 44.000 0.00 0.00 37.52 3.71
4602 6407 5.675071 GCGATCTCTATCCAACTTATCGAGG 60.675 48.000 0.00 0.00 37.52 4.63
4603 6408 5.328691 GCGATCTCTATCCAACTTATCGAG 58.671 45.833 0.00 0.00 37.52 4.04
4604 6409 5.298197 GCGATCTCTATCCAACTTATCGA 57.702 43.478 0.00 0.00 37.52 3.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.