Multiple sequence alignment - TraesCS4D01G027300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G027300 chr4D 100.000 2500 0 0 1 2500 12139909 12137410 0.000000e+00 4617.0
1 TraesCS4D01G027300 chr4D 84.725 1401 181 18 1077 2458 12988868 12990254 0.000000e+00 1371.0
2 TraesCS4D01G027300 chr4D 94.273 454 22 4 2 453 121470927 121471378 0.000000e+00 691.0
3 TraesCS4D01G027300 chr4D 81.545 466 64 12 1680 2142 12992355 12992801 5.080000e-97 364.0
4 TraesCS4D01G027300 chr4D 87.387 222 11 4 481 686 4038428 4038208 3.210000e-59 239.0
5 TraesCS4D01G027300 chr4D 85.778 225 13 9 481 689 43159416 43159637 1.160000e-53 220.0
6 TraesCS4D01G027300 chr4D 80.667 150 20 6 690 837 12973710 12973852 9.460000e-20 108.0
7 TraesCS4D01G027300 chr4B 87.688 1194 125 14 723 1907 22176824 22178004 0.000000e+00 1371.0
8 TraesCS4D01G027300 chr4B 94.872 702 30 3 855 1553 22254157 22254855 0.000000e+00 1092.0
9 TraesCS4D01G027300 chr4B 88.393 224 7 6 481 685 62946915 62947138 4.130000e-63 252.0
10 TraesCS4D01G027300 chr4B 90.244 123 9 1 736 855 22250920 22251042 9.260000e-35 158.0
11 TraesCS4D01G027300 chr4B 94.545 55 1 2 2447 2500 22254941 22254994 1.590000e-12 84.2
12 TraesCS4D01G027300 chr4A 85.285 965 127 6 1000 1955 589486131 589487089 0.000000e+00 981.0
13 TraesCS4D01G027300 chr4A 95.312 64 3 0 2022 2085 589487087 589487150 4.400000e-18 102.0
14 TraesCS4D01G027300 chr4A 81.373 102 14 5 738 837 589485931 589486029 7.410000e-11 78.7
15 TraesCS4D01G027300 chr5D 94.714 454 21 3 1 453 26807516 26807065 0.000000e+00 702.0
16 TraesCS4D01G027300 chr5D 93.846 455 24 3 1 453 68706608 68706156 0.000000e+00 682.0
17 TraesCS4D01G027300 chr5D 93.612 454 28 1 1 453 333347197 333347650 0.000000e+00 676.0
18 TraesCS4D01G027300 chr5D 96.875 32 0 1 454 485 371278346 371278376 4.000000e-03 52.8
19 TraesCS4D01G027300 chr1D 94.518 456 22 3 1 454 408698395 408697941 0.000000e+00 701.0
20 TraesCS4D01G027300 chr2D 93.886 458 27 1 1 457 530307563 530307106 0.000000e+00 689.0
21 TraesCS4D01G027300 chr2D 93.626 455 27 2 1 454 575382592 575382139 0.000000e+00 678.0
22 TraesCS4D01G027300 chr7D 93.534 464 24 4 1 460 108156346 108156807 0.000000e+00 686.0
23 TraesCS4D01G027300 chr7D 93.612 454 24 2 1 453 467635307 467635756 0.000000e+00 673.0
24 TraesCS4D01G027300 chr2B 88.053 226 11 3 481 690 683776759 683776984 1.150000e-63 254.0
25 TraesCS4D01G027300 chr6A 87.330 221 12 4 481 685 384964004 384964224 3.210000e-59 239.0
26 TraesCS4D01G027300 chr6A 100.000 32 0 0 454 485 41079981 41080012 2.690000e-05 60.2
27 TraesCS4D01G027300 chr6D 86.344 227 14 4 481 690 433277402 433277628 5.380000e-57 231.0
28 TraesCS4D01G027300 chr7A 85.973 221 15 4 481 685 485713116 485712896 3.240000e-54 222.0
29 TraesCS4D01G027300 chr7A 94.382 89 5 0 500 588 176272940 176273028 1.210000e-28 137.0
30 TraesCS4D01G027300 chr3A 92.308 143 10 1 477 619 727520437 727520578 4.220000e-48 202.0
31 TraesCS4D01G027300 chr3A 100.000 28 0 0 456 483 476569477 476569450 4.000000e-03 52.8
32 TraesCS4D01G027300 chr5B 100.000 29 0 0 456 484 710170024 710169996 1.000000e-03 54.7
33 TraesCS4D01G027300 chr7B 100.000 28 0 0 454 481 47364147 47364120 4.000000e-03 52.8
34 TraesCS4D01G027300 chr2A 96.774 31 1 0 455 485 733414934 733414904 4.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G027300 chr4D 12137410 12139909 2499 True 4617.000000 4617 100.000000 1 2500 1 chr4D.!!$R2 2499
1 TraesCS4D01G027300 chr4D 12988868 12992801 3933 False 867.500000 1371 83.135000 1077 2458 2 chr4D.!!$F4 1381
2 TraesCS4D01G027300 chr4B 22176824 22178004 1180 False 1371.000000 1371 87.688000 723 1907 1 chr4B.!!$F1 1184
3 TraesCS4D01G027300 chr4B 22250920 22254994 4074 False 444.733333 1092 93.220333 736 2500 3 chr4B.!!$F3 1764
4 TraesCS4D01G027300 chr4A 589485931 589487150 1219 False 387.233333 981 87.323333 738 2085 3 chr4A.!!$F1 1347

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
444 445 0.03392 CCAGCCAAAGCCCTGTTTTC 59.966 55.0 0.0 0.0 41.25 2.29 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1604 4743 0.03213 GACAGTGACGACTCCTGCAA 59.968 55.0 0.0 0.0 0.0 4.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.570234 CGAGAGGAGAAAGCTTAACTAGT 57.430 43.478 0.00 0.00 0.00 2.57
23 24 5.336744 CGAGAGGAGAAAGCTTAACTAGTG 58.663 45.833 0.00 0.00 0.00 2.74
24 25 5.106078 CGAGAGGAGAAAGCTTAACTAGTGT 60.106 44.000 0.00 0.00 0.00 3.55
25 26 6.031751 AGAGGAGAAAGCTTAACTAGTGTG 57.968 41.667 0.00 0.00 0.00 3.82
26 27 5.046950 AGAGGAGAAAGCTTAACTAGTGTGG 60.047 44.000 0.00 0.00 0.00 4.17
27 28 3.685272 GGAGAAAGCTTAACTAGTGTGGC 59.315 47.826 0.00 0.90 0.00 5.01
28 29 4.563786 GGAGAAAGCTTAACTAGTGTGGCT 60.564 45.833 0.00 3.47 0.00 4.75
29 30 4.570930 AGAAAGCTTAACTAGTGTGGCTC 58.429 43.478 14.28 6.38 30.99 4.70
30 31 2.656560 AGCTTAACTAGTGTGGCTCG 57.343 50.000 0.00 0.00 0.00 5.03
31 32 1.204941 AGCTTAACTAGTGTGGCTCGG 59.795 52.381 0.00 0.00 0.00 4.63
32 33 1.739371 GCTTAACTAGTGTGGCTCGGG 60.739 57.143 0.00 0.00 0.00 5.14
33 34 0.248289 TTAACTAGTGTGGCTCGGGC 59.752 55.000 0.00 0.00 37.82 6.13
34 35 0.901114 TAACTAGTGTGGCTCGGGCA 60.901 55.000 10.74 2.21 40.87 5.36
35 36 1.553690 AACTAGTGTGGCTCGGGCAT 61.554 55.000 10.74 0.00 40.92 4.40
36 37 1.221840 CTAGTGTGGCTCGGGCATT 59.778 57.895 10.74 0.00 40.92 3.56
37 38 0.392998 CTAGTGTGGCTCGGGCATTT 60.393 55.000 10.74 0.00 40.92 2.32
38 39 0.037590 TAGTGTGGCTCGGGCATTTT 59.962 50.000 10.74 0.00 40.92 1.82
39 40 0.037590 AGTGTGGCTCGGGCATTTTA 59.962 50.000 10.74 0.00 40.92 1.52
40 41 1.102978 GTGTGGCTCGGGCATTTTAT 58.897 50.000 10.74 0.00 40.92 1.40
41 42 1.065551 GTGTGGCTCGGGCATTTTATC 59.934 52.381 10.74 0.00 40.92 1.75
42 43 0.307760 GTGGCTCGGGCATTTTATCG 59.692 55.000 10.74 0.00 40.92 2.92
43 44 0.179234 TGGCTCGGGCATTTTATCGA 59.821 50.000 10.74 0.00 40.87 3.59
44 45 1.305201 GGCTCGGGCATTTTATCGAA 58.695 50.000 10.74 0.00 40.87 3.71
45 46 1.002792 GGCTCGGGCATTTTATCGAAC 60.003 52.381 10.74 0.00 40.87 3.95
46 47 1.668751 GCTCGGGCATTTTATCGAACA 59.331 47.619 0.00 0.00 38.54 3.18
47 48 2.538939 GCTCGGGCATTTTATCGAACAC 60.539 50.000 0.00 0.00 38.54 3.32
48 49 2.011222 TCGGGCATTTTATCGAACACC 58.989 47.619 0.00 0.00 0.00 4.16
49 50 2.014128 CGGGCATTTTATCGAACACCT 58.986 47.619 0.00 0.00 0.00 4.00
50 51 2.031683 CGGGCATTTTATCGAACACCTC 59.968 50.000 0.00 0.00 0.00 3.85
51 52 3.013921 GGGCATTTTATCGAACACCTCA 58.986 45.455 0.00 0.00 0.00 3.86
52 53 3.632145 GGGCATTTTATCGAACACCTCAT 59.368 43.478 0.00 0.00 0.00 2.90
53 54 4.498009 GGGCATTTTATCGAACACCTCATG 60.498 45.833 0.00 0.00 0.00 3.07
54 55 4.096382 GGCATTTTATCGAACACCTCATGT 59.904 41.667 0.00 0.00 46.42 3.21
66 67 2.251409 CCTCATGTGCATAGGAGGTG 57.749 55.000 29.58 10.75 41.58 4.00
67 68 1.764723 CCTCATGTGCATAGGAGGTGA 59.235 52.381 29.58 9.38 41.58 4.02
68 69 2.224233 CCTCATGTGCATAGGAGGTGAG 60.224 54.545 29.58 17.28 41.58 3.51
69 70 1.139654 TCATGTGCATAGGAGGTGAGC 59.860 52.381 0.00 0.00 0.00 4.26
70 71 1.140452 CATGTGCATAGGAGGTGAGCT 59.860 52.381 0.00 0.00 0.00 4.09
71 72 2.159179 TGTGCATAGGAGGTGAGCTA 57.841 50.000 0.00 0.00 0.00 3.32
72 73 2.034878 TGTGCATAGGAGGTGAGCTAG 58.965 52.381 0.00 0.00 0.00 3.42
73 74 2.311463 GTGCATAGGAGGTGAGCTAGA 58.689 52.381 0.00 0.00 0.00 2.43
74 75 2.295909 GTGCATAGGAGGTGAGCTAGAG 59.704 54.545 0.00 0.00 0.00 2.43
75 76 1.272212 GCATAGGAGGTGAGCTAGAGC 59.728 57.143 0.00 0.00 42.49 4.09
76 77 2.591923 CATAGGAGGTGAGCTAGAGCA 58.408 52.381 4.01 0.00 45.16 4.26
77 78 2.060050 TAGGAGGTGAGCTAGAGCAC 57.940 55.000 4.01 0.00 45.16 4.40
82 83 3.914984 GTGAGCTAGAGCACCACAA 57.085 52.632 16.95 0.00 45.16 3.33
83 84 2.169832 GTGAGCTAGAGCACCACAAA 57.830 50.000 16.95 0.00 45.16 2.83
84 85 2.072298 GTGAGCTAGAGCACCACAAAG 58.928 52.381 16.95 0.00 45.16 2.77
85 86 1.082690 GAGCTAGAGCACCACAAAGC 58.917 55.000 4.01 0.00 45.16 3.51
86 87 0.689623 AGCTAGAGCACCACAAAGCT 59.310 50.000 4.01 0.00 45.16 3.74
90 91 4.809070 AGCACCACAAAGCTCTCC 57.191 55.556 0.00 0.00 36.00 3.71
91 92 1.073897 AGCACCACAAAGCTCTCCC 59.926 57.895 0.00 0.00 36.00 4.30
92 93 1.973812 GCACCACAAAGCTCTCCCC 60.974 63.158 0.00 0.00 0.00 4.81
93 94 1.763770 CACCACAAAGCTCTCCCCT 59.236 57.895 0.00 0.00 0.00 4.79
94 95 0.322008 CACCACAAAGCTCTCCCCTC 60.322 60.000 0.00 0.00 0.00 4.30
95 96 1.078848 CCACAAAGCTCTCCCCTCG 60.079 63.158 0.00 0.00 0.00 4.63
96 97 1.743252 CACAAAGCTCTCCCCTCGC 60.743 63.158 0.00 0.00 0.00 5.03
97 98 2.124942 CAAAGCTCTCCCCTCGCC 60.125 66.667 0.00 0.00 0.00 5.54
98 99 3.775654 AAAGCTCTCCCCTCGCCG 61.776 66.667 0.00 0.00 0.00 6.46
107 108 4.715523 CCCTCGCCGGCCAGAAAA 62.716 66.667 23.78 0.00 0.00 2.29
108 109 2.671619 CCTCGCCGGCCAGAAAAA 60.672 61.111 23.78 0.00 0.00 1.94
132 133 0.036577 AGCACTGTGGAGTGATCTGC 60.037 55.000 10.21 0.00 45.95 4.26
133 134 2.445984 AGCACTGTGGAGTGATCTGCT 61.446 52.381 10.21 0.00 45.95 4.24
134 135 4.305661 AGCACTGTGGAGTGATCTGCTC 62.306 54.545 10.21 8.68 45.95 4.26
135 136 0.529833 ACTGTGGAGTGATCTGCTCG 59.470 55.000 10.31 2.23 34.00 5.03
136 137 0.805322 CTGTGGAGTGATCTGCTCGC 60.805 60.000 10.31 7.49 34.00 5.03
137 138 1.216444 GTGGAGTGATCTGCTCGCA 59.784 57.895 10.31 0.00 36.81 5.10
138 139 0.805322 GTGGAGTGATCTGCTCGCAG 60.805 60.000 12.54 12.54 44.86 5.18
139 140 1.227205 GGAGTGATCTGCTCGCAGG 60.227 63.158 17.93 1.13 43.75 4.85
140 141 1.882167 GAGTGATCTGCTCGCAGGC 60.882 63.158 17.93 11.32 43.75 4.85
141 142 3.260483 GTGATCTGCTCGCAGGCG 61.260 66.667 17.93 7.46 43.75 5.52
142 143 3.451894 TGATCTGCTCGCAGGCGA 61.452 61.111 16.15 16.15 46.87 5.54
150 151 2.196502 TCGCAGGCGAGGGGTATA 59.803 61.111 12.94 0.00 44.01 1.47
151 152 1.228769 TCGCAGGCGAGGGGTATAT 60.229 57.895 12.94 0.00 44.01 0.86
152 153 0.038599 TCGCAGGCGAGGGGTATATA 59.961 55.000 12.94 0.00 44.01 0.86
153 154 1.112113 CGCAGGCGAGGGGTATATAT 58.888 55.000 8.15 0.00 42.83 0.86
154 155 2.092267 TCGCAGGCGAGGGGTATATATA 60.092 50.000 12.94 0.00 44.01 0.86
155 156 2.293677 CGCAGGCGAGGGGTATATATAG 59.706 54.545 8.15 0.00 42.83 1.31
156 157 2.628657 GCAGGCGAGGGGTATATATAGG 59.371 54.545 0.00 0.00 0.00 2.57
157 158 2.628657 CAGGCGAGGGGTATATATAGGC 59.371 54.545 0.00 0.00 0.00 3.93
158 159 2.246588 AGGCGAGGGGTATATATAGGCA 59.753 50.000 0.00 0.00 0.00 4.75
159 160 3.036091 GGCGAGGGGTATATATAGGCAA 58.964 50.000 0.00 0.00 0.00 4.52
160 161 3.453353 GGCGAGGGGTATATATAGGCAAA 59.547 47.826 0.00 0.00 0.00 3.68
161 162 4.102681 GGCGAGGGGTATATATAGGCAAAT 59.897 45.833 0.00 0.00 0.00 2.32
162 163 5.298347 GCGAGGGGTATATATAGGCAAATC 58.702 45.833 0.00 0.00 0.00 2.17
163 164 5.163343 GCGAGGGGTATATATAGGCAAATCA 60.163 44.000 0.00 0.00 0.00 2.57
164 165 6.464465 GCGAGGGGTATATATAGGCAAATCAT 60.464 42.308 0.00 0.00 0.00 2.45
165 166 7.509546 CGAGGGGTATATATAGGCAAATCATT 58.490 38.462 0.00 0.00 0.00 2.57
166 167 7.442364 CGAGGGGTATATATAGGCAAATCATTG 59.558 40.741 0.00 0.00 39.65 2.82
167 168 7.586349 AGGGGTATATATAGGCAAATCATTGG 58.414 38.462 0.00 0.00 37.02 3.16
168 169 7.186409 AGGGGTATATATAGGCAAATCATTGGT 59.814 37.037 0.00 0.00 37.02 3.67
169 170 7.502561 GGGGTATATATAGGCAAATCATTGGTC 59.497 40.741 0.00 0.00 37.02 4.02
170 171 7.502561 GGGTATATATAGGCAAATCATTGGTCC 59.497 40.741 0.00 0.00 37.02 4.46
171 172 7.502561 GGTATATATAGGCAAATCATTGGTCCC 59.497 40.741 0.00 0.00 37.02 4.46
172 173 2.051334 TAGGCAAATCATTGGTCCCG 57.949 50.000 0.00 0.00 37.02 5.14
173 174 0.684153 AGGCAAATCATTGGTCCCGG 60.684 55.000 0.00 0.00 37.02 5.73
174 175 0.970427 GGCAAATCATTGGTCCCGGT 60.970 55.000 0.00 0.00 37.02 5.28
175 176 0.894835 GCAAATCATTGGTCCCGGTT 59.105 50.000 0.00 0.00 37.02 4.44
176 177 1.135112 GCAAATCATTGGTCCCGGTTC 60.135 52.381 0.00 0.00 37.02 3.62
177 178 2.166829 CAAATCATTGGTCCCGGTTCA 58.833 47.619 0.00 0.00 32.69 3.18
178 179 2.760092 CAAATCATTGGTCCCGGTTCAT 59.240 45.455 0.00 0.00 32.69 2.57
179 180 3.943671 AATCATTGGTCCCGGTTCATA 57.056 42.857 0.00 0.00 0.00 2.15
180 181 3.492102 ATCATTGGTCCCGGTTCATAG 57.508 47.619 0.00 0.00 0.00 2.23
181 182 1.134220 TCATTGGTCCCGGTTCATAGC 60.134 52.381 0.00 0.00 0.00 2.97
182 183 1.134098 CATTGGTCCCGGTTCATAGCT 60.134 52.381 0.00 0.00 0.00 3.32
183 184 0.251916 TTGGTCCCGGTTCATAGCTG 59.748 55.000 0.00 0.00 0.00 4.24
184 185 1.146263 GGTCCCGGTTCATAGCTGG 59.854 63.158 0.00 0.00 0.00 4.85
185 186 1.335132 GGTCCCGGTTCATAGCTGGA 61.335 60.000 0.00 0.00 33.46 3.86
186 187 0.539986 GTCCCGGTTCATAGCTGGAA 59.460 55.000 0.00 0.00 36.99 3.53
187 188 0.539986 TCCCGGTTCATAGCTGGAAC 59.460 55.000 19.29 19.29 42.99 3.62
191 192 3.080647 GTTCATAGCTGGAACCGGG 57.919 57.895 17.60 0.00 38.92 5.73
192 193 0.539986 GTTCATAGCTGGAACCGGGA 59.460 55.000 17.60 0.00 38.92 5.14
193 194 0.539986 TTCATAGCTGGAACCGGGAC 59.460 55.000 6.32 0.00 0.00 4.46
194 195 0.325296 TCATAGCTGGAACCGGGACT 60.325 55.000 6.32 0.00 0.00 3.85
195 196 1.063492 TCATAGCTGGAACCGGGACTA 60.063 52.381 6.32 0.00 0.00 2.59
196 197 1.760613 CATAGCTGGAACCGGGACTAA 59.239 52.381 6.32 0.00 0.00 2.24
197 198 1.941377 TAGCTGGAACCGGGACTAAA 58.059 50.000 6.32 0.00 0.00 1.85
198 199 0.613777 AGCTGGAACCGGGACTAAAG 59.386 55.000 6.32 0.00 0.00 1.85
199 200 0.392595 GCTGGAACCGGGACTAAAGG 60.393 60.000 6.32 0.00 0.00 3.11
200 201 1.272807 CTGGAACCGGGACTAAAGGA 58.727 55.000 6.32 0.00 0.00 3.36
201 202 0.978907 TGGAACCGGGACTAAAGGAC 59.021 55.000 6.32 0.00 0.00 3.85
202 203 0.251354 GGAACCGGGACTAAAGGACC 59.749 60.000 6.32 0.00 0.00 4.46
203 204 0.251354 GAACCGGGACTAAAGGACCC 59.749 60.000 6.32 0.00 40.17 4.46
204 205 1.203441 AACCGGGACTAAAGGACCCC 61.203 60.000 6.32 0.00 40.43 4.95
205 206 2.372890 CCGGGACTAAAGGACCCCC 61.373 68.421 0.00 0.00 40.43 5.40
215 216 3.464494 GGACCCCCTTACGTCCCG 61.464 72.222 0.00 0.00 42.39 5.14
216 217 3.464494 GACCCCCTTACGTCCCGG 61.464 72.222 0.00 0.00 0.00 5.73
217 218 4.321515 ACCCCCTTACGTCCCGGT 62.322 66.667 0.00 0.00 0.00 5.28
218 219 3.004946 CCCCCTTACGTCCCGGTT 61.005 66.667 0.00 0.00 0.00 4.44
219 220 2.580815 CCCCTTACGTCCCGGTTC 59.419 66.667 0.00 0.00 0.00 3.62
220 221 1.986210 CCCCTTACGTCCCGGTTCT 60.986 63.158 0.00 0.00 0.00 3.01
221 222 0.684153 CCCCTTACGTCCCGGTTCTA 60.684 60.000 0.00 0.00 0.00 2.10
222 223 0.743097 CCCTTACGTCCCGGTTCTAG 59.257 60.000 0.00 0.00 0.00 2.43
223 224 0.743097 CCTTACGTCCCGGTTCTAGG 59.257 60.000 0.00 0.00 0.00 3.02
224 225 0.101939 CTTACGTCCCGGTTCTAGGC 59.898 60.000 0.00 0.00 0.00 3.93
225 226 0.611618 TTACGTCCCGGTTCTAGGCA 60.612 55.000 0.00 0.00 0.00 4.75
226 227 1.315257 TACGTCCCGGTTCTAGGCAC 61.315 60.000 0.00 0.00 0.00 5.01
227 228 2.183555 GTCCCGGTTCTAGGCACG 59.816 66.667 0.00 0.00 0.00 5.34
228 229 2.036098 TCCCGGTTCTAGGCACGA 59.964 61.111 0.00 0.00 0.00 4.35
229 230 1.607178 TCCCGGTTCTAGGCACGAA 60.607 57.895 0.00 0.00 0.00 3.85
230 231 1.447314 CCCGGTTCTAGGCACGAAC 60.447 63.158 0.00 9.57 39.92 3.95
233 234 4.180496 GTTCTAGGCACGAACCGG 57.820 61.111 0.00 0.00 35.81 5.28
234 235 1.447314 GTTCTAGGCACGAACCGGG 60.447 63.158 6.32 0.00 35.81 5.73
235 236 1.607178 TTCTAGGCACGAACCGGGA 60.607 57.895 6.32 0.00 28.17 5.14
236 237 1.880819 TTCTAGGCACGAACCGGGAC 61.881 60.000 6.32 0.00 39.41 4.46
237 238 3.366739 CTAGGCACGAACCGGGACC 62.367 68.421 6.32 0.00 40.38 4.46
239 240 4.629523 GGCACGAACCGGGACCAA 62.630 66.667 6.32 0.00 28.34 3.67
240 241 2.359478 GCACGAACCGGGACCAAT 60.359 61.111 6.32 0.00 28.17 3.16
241 242 2.686816 GCACGAACCGGGACCAATG 61.687 63.158 6.32 0.00 28.17 2.82
242 243 1.302192 CACGAACCGGGACCAATGT 60.302 57.895 6.32 0.00 28.17 2.71
243 244 1.004200 ACGAACCGGGACCAATGTC 60.004 57.895 6.32 0.00 40.98 3.06
244 245 1.295423 CGAACCGGGACCAATGTCT 59.705 57.895 6.32 0.00 41.47 3.41
245 246 1.019278 CGAACCGGGACCAATGTCTG 61.019 60.000 6.32 0.00 41.47 3.51
246 247 0.036306 GAACCGGGACCAATGTCTGT 59.964 55.000 6.32 0.00 41.47 3.41
247 248 0.250727 AACCGGGACCAATGTCTGTG 60.251 55.000 6.32 0.00 41.47 3.66
248 249 1.377202 CCGGGACCAATGTCTGTGG 60.377 63.158 0.00 0.00 41.47 4.17
249 250 1.377202 CGGGACCAATGTCTGTGGG 60.377 63.158 0.00 0.00 40.75 4.61
250 251 1.678970 GGGACCAATGTCTGTGGGC 60.679 63.158 0.00 0.00 44.26 5.36
251 252 4.002797 GACCAATGTCTGTGGGCC 57.997 61.111 0.00 0.00 38.35 5.80
252 253 1.074775 GACCAATGTCTGTGGGCCA 59.925 57.895 0.00 0.00 38.35 5.36
253 254 0.962356 GACCAATGTCTGTGGGCCAG 60.962 60.000 6.40 0.00 38.35 4.85
254 255 2.345760 CCAATGTCTGTGGGCCAGC 61.346 63.158 6.40 2.28 41.25 4.85
255 256 1.604308 CAATGTCTGTGGGCCAGCA 60.604 57.895 6.40 7.61 41.25 4.41
256 257 1.153524 AATGTCTGTGGGCCAGCAA 59.846 52.632 6.40 0.00 41.25 3.91
257 258 1.181098 AATGTCTGTGGGCCAGCAAC 61.181 55.000 6.40 5.75 41.25 4.17
258 259 3.357079 GTCTGTGGGCCAGCAACG 61.357 66.667 6.40 0.00 41.25 4.10
259 260 3.555324 TCTGTGGGCCAGCAACGA 61.555 61.111 6.40 0.20 41.25 3.85
260 261 3.052082 CTGTGGGCCAGCAACGAG 61.052 66.667 6.40 0.00 33.59 4.18
261 262 4.641645 TGTGGGCCAGCAACGAGG 62.642 66.667 6.40 0.00 0.00 4.63
262 263 4.643387 GTGGGCCAGCAACGAGGT 62.643 66.667 6.40 0.00 0.00 3.85
263 264 4.329545 TGGGCCAGCAACGAGGTC 62.330 66.667 0.00 0.00 0.00 3.85
265 266 4.329545 GGCCAGCAACGAGGTCCA 62.330 66.667 0.00 0.00 0.00 4.02
266 267 2.045926 GCCAGCAACGAGGTCCAT 60.046 61.111 0.00 0.00 0.00 3.41
267 268 1.675641 GCCAGCAACGAGGTCCATT 60.676 57.895 0.00 0.00 0.00 3.16
268 269 1.926511 GCCAGCAACGAGGTCCATTG 61.927 60.000 0.00 0.00 0.00 2.82
269 270 1.308069 CCAGCAACGAGGTCCATTGG 61.308 60.000 0.00 0.00 0.00 3.16
270 271 0.606401 CAGCAACGAGGTCCATTGGT 60.606 55.000 1.86 0.00 34.52 3.67
271 272 0.321653 AGCAACGAGGTCCATTGGTC 60.322 55.000 1.86 0.00 28.17 4.02
272 273 1.305930 GCAACGAGGTCCATTGGTCC 61.306 60.000 10.66 10.66 0.00 4.46
273 274 0.676782 CAACGAGGTCCATTGGTCCC 60.677 60.000 14.46 10.07 31.29 4.46
274 275 2.180159 AACGAGGTCCATTGGTCCCG 62.180 60.000 19.92 19.92 31.29 5.14
275 276 2.590092 GAGGTCCATTGGTCCCGG 59.410 66.667 14.46 0.00 31.29 5.73
276 277 2.204090 AGGTCCATTGGTCCCGGT 60.204 61.111 14.46 0.00 31.29 5.28
277 278 1.848886 GAGGTCCATTGGTCCCGGTT 61.849 60.000 14.46 0.00 31.29 4.44
278 279 1.378119 GGTCCATTGGTCCCGGTTC 60.378 63.158 7.68 0.00 0.00 3.62
279 280 1.743995 GTCCATTGGTCCCGGTTCG 60.744 63.158 0.00 0.00 0.00 3.95
280 281 2.218454 TCCATTGGTCCCGGTTCGT 61.218 57.895 0.00 0.00 0.00 3.85
281 282 2.038269 CCATTGGTCCCGGTTCGTG 61.038 63.158 0.00 0.00 0.00 4.35
282 283 2.359478 ATTGGTCCCGGTTCGTGC 60.359 61.111 0.00 0.00 0.00 5.34
283 284 3.912745 ATTGGTCCCGGTTCGTGCC 62.913 63.158 0.00 0.00 0.00 5.01
288 289 4.323477 CCCGGTTCGTGCCTGGAA 62.323 66.667 0.00 0.00 35.22 3.53
289 290 3.047877 CCGGTTCGTGCCTGGAAC 61.048 66.667 0.00 0.00 42.32 3.62
292 293 3.047877 GTTCGTGCCTGGAACCGG 61.048 66.667 0.00 0.00 38.23 5.28
293 294 4.323477 TTCGTGCCTGGAACCGGG 62.323 66.667 13.91 13.91 45.07 5.73
296 297 3.948719 GTGCCTGGAACCGGGACA 61.949 66.667 21.51 15.19 45.10 4.02
297 298 3.172106 TGCCTGGAACCGGGACAA 61.172 61.111 21.51 4.27 45.10 3.18
298 299 2.114411 GCCTGGAACCGGGACAAA 59.886 61.111 21.51 0.00 45.10 2.83
299 300 1.304134 GCCTGGAACCGGGACAAAT 60.304 57.895 21.51 0.00 45.10 2.32
300 301 1.595093 GCCTGGAACCGGGACAAATG 61.595 60.000 21.51 0.00 45.10 2.32
301 302 0.965363 CCTGGAACCGGGACAAATGG 60.965 60.000 13.03 0.00 45.10 3.16
302 303 0.965363 CTGGAACCGGGACAAATGGG 60.965 60.000 6.32 0.00 0.00 4.00
303 304 1.076014 GGAACCGGGACAAATGGGT 59.924 57.895 6.32 0.00 0.00 4.51
304 305 0.963856 GGAACCGGGACAAATGGGTC 60.964 60.000 6.32 0.00 38.82 4.46
311 312 3.315765 GACAAATGGGTCCACACGA 57.684 52.632 0.00 0.00 0.00 4.35
312 313 1.600023 GACAAATGGGTCCACACGAA 58.400 50.000 0.00 0.00 0.00 3.85
313 314 1.265905 GACAAATGGGTCCACACGAAC 59.734 52.381 0.00 0.00 0.00 3.95
317 318 4.692475 GGGTCCACACGAACCGGG 62.692 72.222 6.32 0.00 39.05 5.73
318 319 3.618750 GGTCCACACGAACCGGGA 61.619 66.667 6.32 0.00 32.98 5.14
319 320 2.356673 GTCCACACGAACCGGGAC 60.357 66.667 6.32 0.00 42.60 4.46
320 321 2.838693 TCCACACGAACCGGGACA 60.839 61.111 6.32 0.00 32.98 4.02
321 322 2.109387 CCACACGAACCGGGACAA 59.891 61.111 6.32 0.00 32.98 3.18
322 323 1.524165 CCACACGAACCGGGACAAA 60.524 57.895 6.32 0.00 32.98 2.83
323 324 0.887387 CCACACGAACCGGGACAAAT 60.887 55.000 6.32 0.00 32.98 2.32
324 325 0.237235 CACACGAACCGGGACAAATG 59.763 55.000 6.32 0.00 32.98 2.32
325 326 1.209127 CACGAACCGGGACAAATGC 59.791 57.895 6.32 0.00 28.17 3.56
326 327 1.969589 ACGAACCGGGACAAATGCC 60.970 57.895 6.32 0.00 0.00 4.40
327 328 1.674322 CGAACCGGGACAAATGCCT 60.674 57.895 6.32 0.00 33.05 4.75
328 329 1.644786 CGAACCGGGACAAATGCCTC 61.645 60.000 6.32 0.00 33.05 4.70
329 330 1.304134 AACCGGGACAAATGCCTCC 60.304 57.895 6.32 0.00 33.05 4.30
330 331 2.440247 CCGGGACAAATGCCTCCC 60.440 66.667 0.00 0.09 42.73 4.30
332 333 2.674754 GGGACAAATGCCTCCCGA 59.325 61.111 0.00 0.00 36.97 5.14
333 334 1.452108 GGGACAAATGCCTCCCGAG 60.452 63.158 0.00 0.00 36.97 4.63
381 382 1.677552 GGGACGTATGCCCCATAGG 59.322 63.158 0.55 4.03 42.24 2.57
382 383 1.125711 GGGACGTATGCCCCATAGGT 61.126 60.000 0.55 9.52 44.54 3.08
383 384 3.908737 GACGTATGCCCCATAGGTC 57.091 57.895 17.09 17.09 46.91 3.85
384 385 2.448749 ACGTATGCCCCATAGGTCC 58.551 57.895 5.12 0.00 40.04 4.46
385 386 1.125711 ACGTATGCCCCATAGGTCCC 61.126 60.000 5.12 0.00 40.04 4.46
386 387 1.677552 GTATGCCCCATAGGTCCCG 59.322 63.158 0.00 0.00 38.26 5.14
387 388 1.537889 TATGCCCCATAGGTCCCGG 60.538 63.158 0.00 0.00 38.26 5.73
388 389 2.335134 TATGCCCCATAGGTCCCGGT 62.335 60.000 0.00 0.00 38.26 5.28
389 390 3.094498 GCCCCATAGGTCCCGGTT 61.094 66.667 0.00 0.00 38.26 4.44
390 391 3.116137 GCCCCATAGGTCCCGGTTC 62.116 68.421 0.00 0.00 38.26 3.62
391 392 2.803817 CCCCATAGGTCCCGGTTCG 61.804 68.421 0.00 0.00 0.00 3.95
392 393 2.062177 CCCATAGGTCCCGGTTCGT 61.062 63.158 0.00 0.00 0.00 3.85
393 394 1.143183 CCATAGGTCCCGGTTCGTG 59.857 63.158 0.00 0.00 0.00 4.35
394 395 1.324740 CCATAGGTCCCGGTTCGTGA 61.325 60.000 0.00 0.00 0.00 4.35
395 396 0.179119 CATAGGTCCCGGTTCGTGAC 60.179 60.000 0.00 0.00 33.83 3.67
396 397 0.612732 ATAGGTCCCGGTTCGTGACA 60.613 55.000 0.00 0.00 36.08 3.58
397 398 1.246056 TAGGTCCCGGTTCGTGACAG 61.246 60.000 0.00 0.00 36.08 3.51
398 399 2.567497 GGTCCCGGTTCGTGACAGA 61.567 63.158 0.00 0.00 36.08 3.41
399 400 1.364901 GTCCCGGTTCGTGACAGAA 59.635 57.895 0.00 0.00 34.65 3.02
404 405 3.946907 GTTCGTGACAGAACCGGG 58.053 61.111 6.32 0.00 43.33 5.73
405 406 1.364901 GTTCGTGACAGAACCGGGA 59.635 57.895 6.32 0.00 43.33 5.14
406 407 0.037605 GTTCGTGACAGAACCGGGAT 60.038 55.000 6.32 0.00 43.33 3.85
407 408 0.682852 TTCGTGACAGAACCGGGATT 59.317 50.000 6.32 0.00 0.00 3.01
408 409 1.548081 TCGTGACAGAACCGGGATTA 58.452 50.000 6.32 0.00 0.00 1.75
409 410 1.894466 TCGTGACAGAACCGGGATTAA 59.106 47.619 6.32 0.00 0.00 1.40
410 411 2.498481 TCGTGACAGAACCGGGATTAAT 59.502 45.455 6.32 0.00 0.00 1.40
411 412 2.607635 CGTGACAGAACCGGGATTAATG 59.392 50.000 6.32 0.00 0.00 1.90
412 413 2.943033 GTGACAGAACCGGGATTAATGG 59.057 50.000 6.32 0.00 0.00 3.16
413 414 2.092646 TGACAGAACCGGGATTAATGGG 60.093 50.000 6.32 0.00 0.00 4.00
414 415 1.318576 CAGAACCGGGATTAATGGGC 58.681 55.000 6.32 0.00 0.00 5.36
415 416 1.133792 CAGAACCGGGATTAATGGGCT 60.134 52.381 6.32 0.00 0.00 5.19
416 417 1.133792 AGAACCGGGATTAATGGGCTG 60.134 52.381 6.32 0.00 0.00 4.85
417 418 0.106217 AACCGGGATTAATGGGCTGG 60.106 55.000 6.32 0.00 0.00 4.85
418 419 1.903404 CCGGGATTAATGGGCTGGC 60.903 63.158 0.00 0.00 0.00 4.85
419 420 1.903404 CGGGATTAATGGGCTGGCC 60.903 63.158 14.23 14.23 0.00 5.36
420 421 1.232792 GGGATTAATGGGCTGGCCA 59.767 57.895 26.08 26.08 37.98 5.36
421 422 0.829182 GGGATTAATGGGCTGGCCAG 60.829 60.000 29.34 29.34 37.98 4.85
422 423 0.829182 GGATTAATGGGCTGGCCAGG 60.829 60.000 33.46 15.81 37.98 4.45
440 441 4.305956 CCCCAGCCAAAGCCCTGT 62.306 66.667 0.00 0.00 41.25 4.00
441 442 2.203684 CCCAGCCAAAGCCCTGTT 60.204 61.111 0.00 0.00 41.25 3.16
442 443 1.838396 CCCAGCCAAAGCCCTGTTT 60.838 57.895 0.00 0.00 41.25 2.83
443 444 1.410050 CCCAGCCAAAGCCCTGTTTT 61.410 55.000 0.00 0.00 41.25 2.43
444 445 0.033920 CCAGCCAAAGCCCTGTTTTC 59.966 55.000 0.00 0.00 41.25 2.29
445 446 1.043022 CAGCCAAAGCCCTGTTTTCT 58.957 50.000 0.00 0.00 41.25 2.52
446 447 2.238521 CAGCCAAAGCCCTGTTTTCTA 58.761 47.619 0.00 0.00 41.25 2.10
447 448 2.029918 CAGCCAAAGCCCTGTTTTCTAC 60.030 50.000 0.00 0.00 41.25 2.59
448 449 2.158460 AGCCAAAGCCCTGTTTTCTACT 60.158 45.455 0.00 0.00 41.25 2.57
449 450 3.073946 AGCCAAAGCCCTGTTTTCTACTA 59.926 43.478 0.00 0.00 41.25 1.82
450 451 3.440522 GCCAAAGCCCTGTTTTCTACTAG 59.559 47.826 0.00 0.00 0.00 2.57
451 452 4.652822 CCAAAGCCCTGTTTTCTACTAGT 58.347 43.478 0.00 0.00 0.00 2.57
452 453 4.455877 CCAAAGCCCTGTTTTCTACTAGTG 59.544 45.833 5.39 0.00 0.00 2.74
453 454 3.983044 AGCCCTGTTTTCTACTAGTGG 57.017 47.619 5.39 1.87 0.00 4.00
454 455 3.248888 AGCCCTGTTTTCTACTAGTGGT 58.751 45.455 5.39 0.00 0.00 4.16
455 456 3.651423 AGCCCTGTTTTCTACTAGTGGTT 59.349 43.478 5.39 0.00 0.00 3.67
456 457 3.751698 GCCCTGTTTTCTACTAGTGGTTG 59.248 47.826 5.39 0.00 0.00 3.77
457 458 3.751698 CCCTGTTTTCTACTAGTGGTTGC 59.248 47.826 5.39 0.00 0.00 4.17
458 459 4.385825 CCTGTTTTCTACTAGTGGTTGCA 58.614 43.478 5.39 1.15 0.00 4.08
459 460 4.819630 CCTGTTTTCTACTAGTGGTTGCAA 59.180 41.667 5.39 0.00 0.00 4.08
460 461 5.277828 CCTGTTTTCTACTAGTGGTTGCAAC 60.278 44.000 21.59 21.59 0.00 4.17
461 462 4.271533 TGTTTTCTACTAGTGGTTGCAACG 59.728 41.667 22.67 11.30 0.00 4.10
462 463 2.074547 TCTACTAGTGGTTGCAACGC 57.925 50.000 22.67 17.34 0.00 4.84
463 464 1.341852 TCTACTAGTGGTTGCAACGCA 59.658 47.619 22.67 18.09 36.47 5.24
464 465 1.459592 CTACTAGTGGTTGCAACGCAC 59.540 52.381 28.96 28.96 38.71 5.34
465 466 1.204062 CTAGTGGTTGCAACGCACG 59.796 57.895 29.24 19.74 38.71 5.34
466 467 2.170260 CTAGTGGTTGCAACGCACGG 62.170 60.000 29.24 24.41 38.71 4.94
467 468 4.622456 GTGGTTGCAACGCACGGG 62.622 66.667 25.24 0.00 38.71 5.28
470 471 4.341502 GTTGCAACGCACGGGCAT 62.342 61.111 14.90 0.00 38.71 4.40
471 472 3.600694 TTGCAACGCACGGGCATT 61.601 55.556 11.77 0.00 38.71 3.56
472 473 3.144120 TTGCAACGCACGGGCATTT 62.144 52.632 11.77 0.00 38.71 2.32
473 474 1.796190 TTGCAACGCACGGGCATTTA 61.796 50.000 11.77 0.00 38.71 1.40
474 475 1.138671 GCAACGCACGGGCATTTAT 59.861 52.632 11.77 0.00 41.24 1.40
475 476 0.378962 GCAACGCACGGGCATTTATA 59.621 50.000 11.77 0.00 41.24 0.98
476 477 1.858399 GCAACGCACGGGCATTTATAC 60.858 52.381 11.77 0.00 41.24 1.47
477 478 1.668751 CAACGCACGGGCATTTATACT 59.331 47.619 11.77 0.00 41.24 2.12
478 479 2.867368 CAACGCACGGGCATTTATACTA 59.133 45.455 11.77 0.00 41.24 1.82
479 480 2.750948 ACGCACGGGCATTTATACTAG 58.249 47.619 11.77 0.00 41.24 2.57
480 481 2.101917 ACGCACGGGCATTTATACTAGT 59.898 45.455 11.77 0.00 41.24 2.57
481 482 3.318839 ACGCACGGGCATTTATACTAGTA 59.681 43.478 11.77 4.77 41.24 1.82
482 483 4.021719 ACGCACGGGCATTTATACTAGTAT 60.022 41.667 19.07 19.07 41.24 2.12
483 484 4.927425 CGCACGGGCATTTATACTAGTATT 59.073 41.667 20.21 0.12 41.24 1.89
484 485 6.094719 CGCACGGGCATTTATACTAGTATTA 58.905 40.000 20.21 9.07 41.24 0.98
485 486 6.755141 CGCACGGGCATTTATACTAGTATTAT 59.245 38.462 20.21 11.50 41.24 1.28
486 487 7.043590 CGCACGGGCATTTATACTAGTATTATC 60.044 40.741 20.21 6.31 41.24 1.75
487 488 7.762615 GCACGGGCATTTATACTAGTATTATCA 59.237 37.037 20.21 0.00 40.72 2.15
488 489 9.302345 CACGGGCATTTATACTAGTATTATCAG 57.698 37.037 20.21 8.69 0.00 2.90
489 490 9.251440 ACGGGCATTTATACTAGTATTATCAGA 57.749 33.333 20.21 0.00 0.00 3.27
490 491 9.737427 CGGGCATTTATACTAGTATTATCAGAG 57.263 37.037 20.21 6.39 0.00 3.35
500 501 8.932434 ACTAGTATTATCAGAGAGATCAAGCA 57.068 34.615 0.00 0.00 38.19 3.91
501 502 9.360901 ACTAGTATTATCAGAGAGATCAAGCAA 57.639 33.333 0.00 0.00 38.19 3.91
504 505 8.703743 AGTATTATCAGAGAGATCAAGCAAAGT 58.296 33.333 0.00 0.00 38.19 2.66
505 506 9.973450 GTATTATCAGAGAGATCAAGCAAAGTA 57.027 33.333 0.00 0.00 38.19 2.24
507 508 8.883954 TTATCAGAGAGATCAAGCAAAGTATG 57.116 34.615 0.00 0.00 38.19 2.39
508 509 5.668471 TCAGAGAGATCAAGCAAAGTATGG 58.332 41.667 0.00 0.00 0.00 2.74
509 510 5.423290 TCAGAGAGATCAAGCAAAGTATGGA 59.577 40.000 0.00 0.00 0.00 3.41
510 511 5.754406 CAGAGAGATCAAGCAAAGTATGGAG 59.246 44.000 0.00 0.00 0.00 3.86
511 512 5.033589 AGAGATCAAGCAAAGTATGGAGG 57.966 43.478 0.00 0.00 0.00 4.30
512 513 4.718774 AGAGATCAAGCAAAGTATGGAGGA 59.281 41.667 0.00 0.00 0.00 3.71
513 514 5.190528 AGAGATCAAGCAAAGTATGGAGGAA 59.809 40.000 0.00 0.00 0.00 3.36
514 515 5.189180 AGATCAAGCAAAGTATGGAGGAAC 58.811 41.667 0.00 0.00 0.00 3.62
515 516 3.334691 TCAAGCAAAGTATGGAGGAACG 58.665 45.455 0.00 0.00 0.00 3.95
516 517 3.074412 CAAGCAAAGTATGGAGGAACGT 58.926 45.455 0.00 0.00 0.00 3.99
517 518 2.699954 AGCAAAGTATGGAGGAACGTG 58.300 47.619 0.00 0.00 0.00 4.49
518 519 2.301870 AGCAAAGTATGGAGGAACGTGA 59.698 45.455 0.00 0.00 0.00 4.35
519 520 2.415512 GCAAAGTATGGAGGAACGTGAC 59.584 50.000 0.00 0.00 0.00 3.67
520 521 3.864921 GCAAAGTATGGAGGAACGTGACT 60.865 47.826 0.00 0.00 0.00 3.41
521 522 3.870633 AAGTATGGAGGAACGTGACTC 57.129 47.619 10.41 10.41 0.00 3.36
522 523 3.088789 AGTATGGAGGAACGTGACTCT 57.911 47.619 16.41 4.00 34.22 3.24
523 524 3.432378 AGTATGGAGGAACGTGACTCTT 58.568 45.455 16.41 9.21 34.22 2.85
524 525 3.444388 AGTATGGAGGAACGTGACTCTTC 59.556 47.826 16.41 4.82 34.22 2.87
525 526 1.996798 TGGAGGAACGTGACTCTTCT 58.003 50.000 16.41 0.00 34.22 2.85
526 527 3.150458 TGGAGGAACGTGACTCTTCTA 57.850 47.619 16.41 0.61 34.22 2.10
527 528 3.698289 TGGAGGAACGTGACTCTTCTAT 58.302 45.455 16.41 0.00 34.22 1.98
528 529 4.087182 TGGAGGAACGTGACTCTTCTATT 58.913 43.478 16.41 0.00 34.22 1.73
529 530 5.258841 TGGAGGAACGTGACTCTTCTATTA 58.741 41.667 16.41 0.00 34.22 0.98
530 531 5.125097 TGGAGGAACGTGACTCTTCTATTAC 59.875 44.000 16.41 2.11 34.22 1.89
531 532 5.357596 GGAGGAACGTGACTCTTCTATTACT 59.642 44.000 16.41 0.00 34.22 2.24
532 533 6.439675 AGGAACGTGACTCTTCTATTACTC 57.560 41.667 0.00 0.00 0.00 2.59
533 534 5.064962 AGGAACGTGACTCTTCTATTACTCG 59.935 44.000 0.00 0.00 0.00 4.18
534 535 5.163774 GGAACGTGACTCTTCTATTACTCGT 60.164 44.000 0.00 0.00 0.00 4.18
535 536 6.036517 GGAACGTGACTCTTCTATTACTCGTA 59.963 42.308 0.00 0.00 0.00 3.43
536 537 7.254727 GGAACGTGACTCTTCTATTACTCGTAT 60.255 40.741 0.00 0.00 0.00 3.06
537 538 8.654230 AACGTGACTCTTCTATTACTCGTATA 57.346 34.615 0.00 0.00 0.00 1.47
538 539 8.830201 ACGTGACTCTTCTATTACTCGTATAT 57.170 34.615 0.00 0.00 0.00 0.86
539 540 8.710551 ACGTGACTCTTCTATTACTCGTATATG 58.289 37.037 0.00 0.00 0.00 1.78
540 541 8.710551 CGTGACTCTTCTATTACTCGTATATGT 58.289 37.037 0.00 0.00 0.00 2.29
542 543 8.923683 TGACTCTTCTATTACTCGTATATGTCG 58.076 37.037 0.00 0.00 0.00 4.35
543 544 8.830201 ACTCTTCTATTACTCGTATATGTCGT 57.170 34.615 0.00 0.00 0.00 4.34
544 545 9.920133 ACTCTTCTATTACTCGTATATGTCGTA 57.080 33.333 0.00 0.00 0.00 3.43
546 547 9.920133 TCTTCTATTACTCGTATATGTCGTAGT 57.080 33.333 0.00 0.35 0.00 2.73
547 548 9.955310 CTTCTATTACTCGTATATGTCGTAGTG 57.045 37.037 12.40 0.00 0.00 2.74
548 549 8.471361 TCTATTACTCGTATATGTCGTAGTGG 57.529 38.462 12.40 0.00 0.00 4.00
549 550 3.892918 ACTCGTATATGTCGTAGTGGC 57.107 47.619 0.00 0.00 0.00 5.01
550 551 3.208594 ACTCGTATATGTCGTAGTGGCA 58.791 45.455 0.00 0.00 0.00 4.92
551 552 3.628942 ACTCGTATATGTCGTAGTGGCAA 59.371 43.478 0.00 0.00 0.00 4.52
552 553 4.277672 ACTCGTATATGTCGTAGTGGCAAT 59.722 41.667 0.00 0.00 0.00 3.56
553 554 5.471116 ACTCGTATATGTCGTAGTGGCAATA 59.529 40.000 0.00 0.00 0.00 1.90
554 555 5.934921 TCGTATATGTCGTAGTGGCAATAG 58.065 41.667 0.00 0.00 0.00 1.73
555 556 5.471116 TCGTATATGTCGTAGTGGCAATAGT 59.529 40.000 0.00 0.00 0.00 2.12
556 557 5.567915 CGTATATGTCGTAGTGGCAATAGTG 59.432 44.000 0.00 0.00 0.00 2.74
557 558 3.887621 ATGTCGTAGTGGCAATAGTGT 57.112 42.857 0.00 0.00 0.00 3.55
558 559 3.671008 TGTCGTAGTGGCAATAGTGTT 57.329 42.857 0.00 0.00 0.00 3.32
559 560 4.787260 TGTCGTAGTGGCAATAGTGTTA 57.213 40.909 0.00 0.00 0.00 2.41
560 561 4.740268 TGTCGTAGTGGCAATAGTGTTAG 58.260 43.478 0.00 0.00 0.00 2.34
561 562 4.219070 TGTCGTAGTGGCAATAGTGTTAGT 59.781 41.667 0.00 0.00 0.00 2.24
562 563 4.797349 GTCGTAGTGGCAATAGTGTTAGTC 59.203 45.833 0.00 0.00 0.00 2.59
563 564 4.460034 TCGTAGTGGCAATAGTGTTAGTCA 59.540 41.667 0.00 0.00 0.00 3.41
564 565 5.126545 TCGTAGTGGCAATAGTGTTAGTCAT 59.873 40.000 0.00 0.00 0.00 3.06
565 566 5.810587 CGTAGTGGCAATAGTGTTAGTCATT 59.189 40.000 0.00 0.00 0.00 2.57
566 567 6.019801 CGTAGTGGCAATAGTGTTAGTCATTC 60.020 42.308 0.00 0.00 0.00 2.67
567 568 5.186198 AGTGGCAATAGTGTTAGTCATTCC 58.814 41.667 0.00 0.00 0.00 3.01
568 569 4.941263 GTGGCAATAGTGTTAGTCATTCCA 59.059 41.667 0.00 0.00 0.00 3.53
569 570 5.590259 GTGGCAATAGTGTTAGTCATTCCAT 59.410 40.000 0.00 0.00 0.00 3.41
570 571 5.589855 TGGCAATAGTGTTAGTCATTCCATG 59.410 40.000 0.00 0.00 0.00 3.66
571 572 5.009010 GGCAATAGTGTTAGTCATTCCATGG 59.991 44.000 4.97 4.97 0.00 3.66
572 573 5.506317 GCAATAGTGTTAGTCATTCCATGGC 60.506 44.000 6.96 0.00 34.38 4.40
573 574 3.719268 AGTGTTAGTCATTCCATGGCA 57.281 42.857 6.96 0.00 37.34 4.92
574 575 4.032960 AGTGTTAGTCATTCCATGGCAA 57.967 40.909 6.96 2.77 37.34 4.52
575 576 4.406456 AGTGTTAGTCATTCCATGGCAAA 58.594 39.130 6.96 0.00 37.34 3.68
576 577 4.218417 AGTGTTAGTCATTCCATGGCAAAC 59.782 41.667 6.96 2.54 37.34 2.93
577 578 4.218417 GTGTTAGTCATTCCATGGCAAACT 59.782 41.667 6.96 10.16 37.34 2.66
578 579 4.832266 TGTTAGTCATTCCATGGCAAACTT 59.168 37.500 6.96 0.00 37.34 2.66
579 580 5.304101 TGTTAGTCATTCCATGGCAAACTTT 59.696 36.000 6.96 0.00 37.34 2.66
580 581 4.261578 AGTCATTCCATGGCAAACTTTG 57.738 40.909 6.96 0.00 37.34 2.77
581 582 3.007182 AGTCATTCCATGGCAAACTTTGG 59.993 43.478 6.96 0.00 37.34 3.28
582 583 2.971330 TCATTCCATGGCAAACTTTGGT 59.029 40.909 6.96 0.00 0.00 3.67
583 584 4.021544 GTCATTCCATGGCAAACTTTGGTA 60.022 41.667 6.96 0.00 34.33 3.25
584 585 4.220382 TCATTCCATGGCAAACTTTGGTAG 59.780 41.667 6.96 0.00 0.00 3.18
585 586 2.524306 TCCATGGCAAACTTTGGTAGG 58.476 47.619 6.96 0.00 0.00 3.18
586 587 1.550072 CCATGGCAAACTTTGGTAGGG 59.450 52.381 0.00 0.00 0.00 3.53
587 588 1.066929 CATGGCAAACTTTGGTAGGGC 60.067 52.381 3.69 0.00 0.00 5.19
588 589 0.187361 TGGCAAACTTTGGTAGGGCT 59.813 50.000 3.69 0.00 0.00 5.19
589 590 1.425831 TGGCAAACTTTGGTAGGGCTA 59.574 47.619 3.69 0.00 0.00 3.93
590 591 2.158445 TGGCAAACTTTGGTAGGGCTAA 60.158 45.455 3.69 0.00 0.00 3.09
591 592 3.096852 GGCAAACTTTGGTAGGGCTAAT 58.903 45.455 3.69 0.00 0.00 1.73
592 593 3.119137 GGCAAACTTTGGTAGGGCTAATG 60.119 47.826 3.69 0.00 0.00 1.90
593 594 3.119137 GCAAACTTTGGTAGGGCTAATGG 60.119 47.826 3.69 0.00 0.00 3.16
594 595 4.086457 CAAACTTTGGTAGGGCTAATGGT 58.914 43.478 0.00 0.00 0.00 3.55
595 596 3.646736 ACTTTGGTAGGGCTAATGGTC 57.353 47.619 0.00 0.00 0.00 4.02
596 597 2.093128 ACTTTGGTAGGGCTAATGGTCG 60.093 50.000 0.00 0.00 0.00 4.79
597 598 1.868713 TTGGTAGGGCTAATGGTCGA 58.131 50.000 0.00 0.00 0.00 4.20
598 599 1.868713 TGGTAGGGCTAATGGTCGAA 58.131 50.000 0.00 0.00 0.00 3.71
599 600 1.483415 TGGTAGGGCTAATGGTCGAAC 59.517 52.381 0.00 0.00 0.00 3.95
600 601 1.761198 GGTAGGGCTAATGGTCGAACT 59.239 52.381 0.33 0.00 0.00 3.01
601 602 2.961062 GGTAGGGCTAATGGTCGAACTA 59.039 50.000 0.33 0.00 0.00 2.24
602 603 3.577415 GGTAGGGCTAATGGTCGAACTAT 59.423 47.826 0.33 0.00 0.00 2.12
603 604 3.753294 AGGGCTAATGGTCGAACTATG 57.247 47.619 0.33 0.00 0.00 2.23
604 605 2.368875 AGGGCTAATGGTCGAACTATGG 59.631 50.000 0.33 0.00 0.00 2.74
605 606 2.550208 GGGCTAATGGTCGAACTATGGG 60.550 54.545 0.33 0.00 0.00 4.00
606 607 2.104281 GGCTAATGGTCGAACTATGGGT 59.896 50.000 0.33 0.00 0.00 4.51
607 608 3.433173 GGCTAATGGTCGAACTATGGGTT 60.433 47.826 0.33 0.00 41.40 4.11
608 609 3.560068 GCTAATGGTCGAACTATGGGTTG 59.440 47.826 0.33 0.00 38.41 3.77
609 610 2.710096 ATGGTCGAACTATGGGTTGG 57.290 50.000 0.33 0.00 38.41 3.77
610 611 0.035820 TGGTCGAACTATGGGTTGGC 60.036 55.000 0.33 0.00 38.41 4.52
611 612 0.252197 GGTCGAACTATGGGTTGGCT 59.748 55.000 0.00 0.00 38.41 4.75
612 613 1.483415 GGTCGAACTATGGGTTGGCTA 59.517 52.381 0.00 0.00 38.41 3.93
613 614 2.483188 GGTCGAACTATGGGTTGGCTAG 60.483 54.545 0.00 0.00 38.41 3.42
614 615 1.760613 TCGAACTATGGGTTGGCTAGG 59.239 52.381 0.00 0.00 38.41 3.02
615 616 1.202651 CGAACTATGGGTTGGCTAGGG 60.203 57.143 0.00 0.00 38.41 3.53
616 617 1.844497 GAACTATGGGTTGGCTAGGGT 59.156 52.381 0.00 0.00 38.41 4.34
617 618 1.508256 ACTATGGGTTGGCTAGGGTC 58.492 55.000 0.00 0.00 0.00 4.46
618 619 0.765510 CTATGGGTTGGCTAGGGTCC 59.234 60.000 0.00 0.00 0.00 4.46
619 620 1.052124 TATGGGTTGGCTAGGGTCCG 61.052 60.000 0.00 0.00 0.00 4.79
620 621 3.793888 GGGTTGGCTAGGGTCCGG 61.794 72.222 0.00 0.00 0.00 5.14
621 622 4.484872 GGTTGGCTAGGGTCCGGC 62.485 72.222 0.00 0.00 0.00 6.13
622 623 3.400054 GTTGGCTAGGGTCCGGCT 61.400 66.667 0.00 0.00 0.00 5.52
623 624 3.081409 TTGGCTAGGGTCCGGCTC 61.081 66.667 0.00 0.00 0.00 4.70
624 625 3.618855 TTGGCTAGGGTCCGGCTCT 62.619 63.158 0.00 0.00 0.00 4.09
625 626 3.541713 GGCTAGGGTCCGGCTCTG 61.542 72.222 8.35 1.04 0.00 3.35
626 627 2.760385 GCTAGGGTCCGGCTCTGT 60.760 66.667 8.35 0.00 0.00 3.41
627 628 2.359967 GCTAGGGTCCGGCTCTGTT 61.360 63.158 8.35 0.00 0.00 3.16
628 629 1.517832 CTAGGGTCCGGCTCTGTTG 59.482 63.158 8.35 0.00 0.00 3.33
629 630 2.579684 CTAGGGTCCGGCTCTGTTGC 62.580 65.000 8.35 0.00 0.00 4.17
630 631 4.021925 GGGTCCGGCTCTGTTGCT 62.022 66.667 0.00 0.00 0.00 3.91
631 632 2.435059 GGTCCGGCTCTGTTGCTC 60.435 66.667 0.00 0.00 0.00 4.26
632 633 2.659610 GTCCGGCTCTGTTGCTCT 59.340 61.111 0.00 0.00 0.00 4.09
633 634 1.605058 GGTCCGGCTCTGTTGCTCTA 61.605 60.000 0.00 0.00 0.00 2.43
634 635 0.458716 GTCCGGCTCTGTTGCTCTAC 60.459 60.000 0.00 0.00 0.00 2.59
635 636 1.517257 CCGGCTCTGTTGCTCTACG 60.517 63.158 0.00 0.00 0.00 3.51
636 637 1.506718 CGGCTCTGTTGCTCTACGA 59.493 57.895 0.00 0.00 0.00 3.43
637 638 0.524392 CGGCTCTGTTGCTCTACGAG 60.524 60.000 0.00 0.00 0.00 4.18
638 639 0.811915 GGCTCTGTTGCTCTACGAGA 59.188 55.000 0.00 0.00 0.00 4.04
639 640 1.407258 GGCTCTGTTGCTCTACGAGAT 59.593 52.381 0.00 0.00 0.00 2.75
640 641 2.159170 GGCTCTGTTGCTCTACGAGATT 60.159 50.000 0.00 0.00 0.00 2.40
641 642 2.857152 GCTCTGTTGCTCTACGAGATTG 59.143 50.000 0.00 0.00 0.00 2.67
642 643 3.674682 GCTCTGTTGCTCTACGAGATTGT 60.675 47.826 0.00 0.00 0.00 2.71
643 644 4.438880 GCTCTGTTGCTCTACGAGATTGTA 60.439 45.833 0.00 0.00 0.00 2.41
644 645 4.982999 TCTGTTGCTCTACGAGATTGTAC 58.017 43.478 0.00 0.00 0.00 2.90
645 646 4.700692 TCTGTTGCTCTACGAGATTGTACT 59.299 41.667 0.00 0.00 0.00 2.73
646 647 4.982999 TGTTGCTCTACGAGATTGTACTC 58.017 43.478 0.00 0.00 0.00 2.59
647 648 4.142447 TGTTGCTCTACGAGATTGTACTCC 60.142 45.833 0.00 0.00 33.83 3.85
648 649 3.617284 TGCTCTACGAGATTGTACTCCA 58.383 45.455 0.00 0.00 33.83 3.86
649 650 4.207955 TGCTCTACGAGATTGTACTCCAT 58.792 43.478 0.00 0.00 33.83 3.41
650 651 5.374071 TGCTCTACGAGATTGTACTCCATA 58.626 41.667 0.00 0.00 33.83 2.74
651 652 5.826208 TGCTCTACGAGATTGTACTCCATAA 59.174 40.000 0.00 0.00 33.83 1.90
652 653 6.490381 TGCTCTACGAGATTGTACTCCATAAT 59.510 38.462 0.00 0.00 33.83 1.28
653 654 7.014326 TGCTCTACGAGATTGTACTCCATAATT 59.986 37.037 0.00 0.00 33.83 1.40
654 655 7.868415 GCTCTACGAGATTGTACTCCATAATTT 59.132 37.037 0.00 0.00 33.83 1.82
655 656 9.751542 CTCTACGAGATTGTACTCCATAATTTT 57.248 33.333 0.00 0.00 33.83 1.82
703 704 5.890424 AAAAGAAAAACTCGTCTCAACCA 57.110 34.783 0.00 0.00 0.00 3.67
704 705 5.485662 AAAGAAAAACTCGTCTCAACCAG 57.514 39.130 0.00 0.00 0.00 4.00
705 706 4.138487 AGAAAAACTCGTCTCAACCAGT 57.862 40.909 0.00 0.00 0.00 4.00
706 707 4.514401 AGAAAAACTCGTCTCAACCAGTT 58.486 39.130 0.00 0.00 38.31 3.16
707 708 4.941873 AGAAAAACTCGTCTCAACCAGTTT 59.058 37.500 0.00 0.00 45.17 2.66
708 709 4.877323 AAAACTCGTCTCAACCAGTTTC 57.123 40.909 2.55 0.00 43.31 2.78
709 710 2.528041 ACTCGTCTCAACCAGTTTCC 57.472 50.000 0.00 0.00 0.00 3.13
710 711 1.760613 ACTCGTCTCAACCAGTTTCCA 59.239 47.619 0.00 0.00 0.00 3.53
711 712 2.169769 ACTCGTCTCAACCAGTTTCCAA 59.830 45.455 0.00 0.00 0.00 3.53
712 713 2.802816 CTCGTCTCAACCAGTTTCCAAG 59.197 50.000 0.00 0.00 0.00 3.61
713 714 2.432874 TCGTCTCAACCAGTTTCCAAGA 59.567 45.455 0.00 0.00 0.00 3.02
714 715 3.118555 TCGTCTCAACCAGTTTCCAAGAA 60.119 43.478 0.00 0.00 0.00 2.52
715 716 3.625764 CGTCTCAACCAGTTTCCAAGAAA 59.374 43.478 0.00 0.00 0.00 2.52
716 717 4.095782 CGTCTCAACCAGTTTCCAAGAAAA 59.904 41.667 0.00 0.00 0.00 2.29
717 718 5.392595 CGTCTCAACCAGTTTCCAAGAAAAA 60.393 40.000 0.00 0.00 0.00 1.94
774 775 1.337071 ACGCATCAGATTCGTATCCGT 59.663 47.619 6.28 0.00 34.41 4.69
775 776 2.223735 ACGCATCAGATTCGTATCCGTT 60.224 45.455 6.28 0.00 34.41 4.44
778 779 4.518217 GCATCAGATTCGTATCCGTTTTG 58.482 43.478 0.00 0.00 35.01 2.44
953 4087 3.785499 GCCGGCTTCGTTTCCGTC 61.785 66.667 22.15 0.00 43.87 4.79
981 4115 0.456142 CGCCGACTTCGATCACTTCA 60.456 55.000 0.00 0.00 43.02 3.02
984 4118 1.272781 CGACTTCGATCACTTCAGCC 58.727 55.000 0.00 0.00 43.02 4.85
1052 4189 1.588239 AGATGCATGTCTCCTTCCCA 58.412 50.000 2.46 0.00 0.00 4.37
1053 4190 1.489649 AGATGCATGTCTCCTTCCCAG 59.510 52.381 2.46 0.00 0.00 4.45
1054 4191 0.106819 ATGCATGTCTCCTTCCCAGC 60.107 55.000 0.00 0.00 0.00 4.85
1081 4218 2.597217 CAACCCGGTGCACCACAT 60.597 61.111 34.16 16.36 35.86 3.21
1428 4567 6.013379 TCAGGAACCACTGTATTCTTGATTCT 60.013 38.462 12.07 0.00 36.39 2.40
1557 4696 0.546507 AAATGCCCGGGGGAACAAAT 60.547 50.000 25.28 2.07 37.50 2.32
1568 4707 1.243902 GGAACAAATTGGTCGCTCCA 58.756 50.000 4.81 0.00 45.60 3.86
1599 4738 2.544480 TCATCTCTACGTGTGCTTCG 57.456 50.000 0.00 0.00 0.00 3.79
1604 4743 2.124903 CTCTACGTGTGCTTCGTTTGT 58.875 47.619 0.00 0.00 41.72 2.83
1620 4759 0.464036 TTGTTGCAGGAGTCGTCACT 59.536 50.000 0.00 0.00 34.57 3.41
1641 4780 8.228464 GTCACTGTCTTGCTTACCTTTAATAAC 58.772 37.037 0.00 0.00 0.00 1.89
1656 4795 6.071391 CCTTTAATAACTTTGATGGTGTGGCT 60.071 38.462 0.00 0.00 0.00 4.75
1676 4815 1.291033 TGTGGCTACCTCCCTAGACAT 59.709 52.381 0.00 0.00 34.15 3.06
1717 4856 2.672996 AATGCCCAGCGTGGTCAC 60.673 61.111 3.82 0.00 35.17 3.67
1761 4900 5.801531 AGCTATACGTGGTTGATATTCCA 57.198 39.130 0.00 0.00 0.00 3.53
1763 4902 5.538813 AGCTATACGTGGTTGATATTCCAGA 59.461 40.000 0.00 0.00 34.16 3.86
1776 4915 5.691754 TGATATTCCAGAAATCGATGTGACG 59.308 40.000 0.00 0.00 0.00 4.35
1798 4943 2.253603 GTGCACCAATGATTTTCGAGC 58.746 47.619 5.22 0.00 0.00 5.03
1806 4951 0.320334 TGATTTTCGAGCTGGACGCA 60.320 50.000 0.00 0.00 42.61 5.24
1833 4984 0.606401 ACCATCGAGCCACACCAAAG 60.606 55.000 0.00 0.00 0.00 2.77
1851 5002 0.106819 AGCTGATCTTCACATGCCCC 60.107 55.000 0.00 0.00 0.00 5.80
1852 5003 0.394762 GCTGATCTTCACATGCCCCA 60.395 55.000 0.00 0.00 0.00 4.96
1853 5004 1.676746 CTGATCTTCACATGCCCCAG 58.323 55.000 0.00 0.00 0.00 4.45
1860 5011 0.907486 TCACATGCCCCAGAGAGAAG 59.093 55.000 0.00 0.00 0.00 2.85
1912 5066 2.168728 GGCTCGGAGATCTTAGTGGTTT 59.831 50.000 9.69 0.00 33.89 3.27
1959 5115 7.178628 TCCCATATTACTGTCTATAGACTTGCC 59.821 40.741 28.53 7.31 44.99 4.52
1962 5118 6.902771 ATTACTGTCTATAGACTTGCCGAT 57.097 37.500 28.53 14.63 44.99 4.18
1963 5119 4.839668 ACTGTCTATAGACTTGCCGATC 57.160 45.455 28.53 4.62 44.99 3.69
1974 5130 0.322456 TTGCCGATCTTGTCTTGGGG 60.322 55.000 0.00 0.00 0.00 4.96
1995 5151 5.746307 GGAAATTTATCCCGGTAACAGAC 57.254 43.478 0.00 0.00 33.05 3.51
2007 5163 3.367025 CGGTAACAGACATCGGAGAAAAC 59.633 47.826 0.00 0.00 43.58 2.43
2010 5166 3.753294 ACAGACATCGGAGAAAACACT 57.247 42.857 0.00 0.00 43.58 3.55
2013 5169 6.525578 ACAGACATCGGAGAAAACACTATA 57.474 37.500 0.00 0.00 43.58 1.31
2065 5221 1.006832 CAAGGCATTTCCTACCGTCG 58.993 55.000 0.00 0.00 46.94 5.12
2085 5241 5.221130 GTCGAGGCCAATACTATTGTCTAC 58.779 45.833 5.01 0.00 0.00 2.59
2095 5251 4.142609 ACTATTGTCTACTACCGTCCGA 57.857 45.455 0.00 0.00 0.00 4.55
2101 5257 3.201290 GTCTACTACCGTCCGATCAAGA 58.799 50.000 0.00 0.00 0.00 3.02
2104 5260 1.475682 ACTACCGTCCGATCAAGAACC 59.524 52.381 0.00 0.00 0.00 3.62
2115 5271 2.842208 TCAAGAACCGTTTTGCACAG 57.158 45.000 0.00 0.00 0.00 3.66
2119 5275 1.944709 AGAACCGTTTTGCACAGTACC 59.055 47.619 0.00 0.00 0.00 3.34
2121 5277 1.975660 ACCGTTTTGCACAGTACCAT 58.024 45.000 0.00 0.00 0.00 3.55
2125 5281 3.687212 CCGTTTTGCACAGTACCATATCA 59.313 43.478 0.00 0.00 0.00 2.15
2129 5285 6.091577 CGTTTTGCACAGTACCATATCAGTAA 59.908 38.462 0.00 0.00 0.00 2.24
2130 5286 6.978343 TTTGCACAGTACCATATCAGTAAC 57.022 37.500 0.00 0.00 0.00 2.50
2132 5288 4.049186 GCACAGTACCATATCAGTAACCG 58.951 47.826 0.00 0.00 0.00 4.44
2158 5314 0.387929 GTCACGGGCATTAGATCGGA 59.612 55.000 0.00 0.00 0.00 4.55
2164 5320 0.952984 GGCATTAGATCGGAGCAGCC 60.953 60.000 0.00 0.00 0.00 4.85
2165 5321 0.034616 GCATTAGATCGGAGCAGCCT 59.965 55.000 0.00 0.00 0.00 4.58
2169 5325 4.573900 CATTAGATCGGAGCAGCCTAAAT 58.426 43.478 0.00 0.00 0.00 1.40
2199 5355 3.637273 GGCCCCCGTAGCCCTATG 61.637 72.222 0.00 0.00 45.16 2.23
2206 5362 2.244695 CCCGTAGCCCTATGTGTCATA 58.755 52.381 0.00 0.00 0.00 2.15
2214 5370 7.309255 CGTAGCCCTATGTGTCATATCTTAACT 60.309 40.741 0.00 0.00 0.00 2.24
2220 5376 5.801350 TGTGTCATATCTTAACTTGCTGC 57.199 39.130 0.00 0.00 0.00 5.25
2222 5378 5.582269 TGTGTCATATCTTAACTTGCTGCTC 59.418 40.000 0.00 0.00 0.00 4.26
2249 5408 3.362596 GCGCATTGGTACGTACATATGTG 60.363 47.826 29.40 29.40 34.75 3.21
2250 5409 3.183574 CGCATTGGTACGTACATATGTGG 59.816 47.826 27.75 20.29 31.35 4.17
2255 5414 4.757594 TGGTACGTACATATGTGGGTTTC 58.242 43.478 26.02 11.29 0.00 2.78
2261 5420 5.182380 ACGTACATATGTGGGTTTCTTTTGG 59.818 40.000 18.81 0.00 0.00 3.28
2266 5425 2.114616 TGTGGGTTTCTTTTGGTGCAT 58.885 42.857 0.00 0.00 0.00 3.96
2267 5426 2.158986 TGTGGGTTTCTTTTGGTGCATG 60.159 45.455 0.00 0.00 0.00 4.06
2271 5430 4.590647 TGGGTTTCTTTTGGTGCATGATAA 59.409 37.500 0.00 0.00 0.00 1.75
2274 5433 6.980397 GGGTTTCTTTTGGTGCATGATAATAG 59.020 38.462 0.00 0.00 0.00 1.73
2275 5434 6.476706 GGTTTCTTTTGGTGCATGATAATAGC 59.523 38.462 0.00 0.00 0.00 2.97
2277 5436 6.772360 TCTTTTGGTGCATGATAATAGCAA 57.228 33.333 0.00 0.00 40.35 3.91
2278 5437 6.563422 TCTTTTGGTGCATGATAATAGCAAC 58.437 36.000 0.00 0.00 45.81 4.17
2279 5438 4.916983 TTGGTGCATGATAATAGCAACC 57.083 40.909 0.00 0.00 45.04 3.77
2280 5439 3.895998 TGGTGCATGATAATAGCAACCA 58.104 40.909 0.00 0.00 45.04 3.67
2281 5440 4.472496 TGGTGCATGATAATAGCAACCAT 58.528 39.130 0.00 0.00 45.04 3.55
2282 5441 5.629125 TGGTGCATGATAATAGCAACCATA 58.371 37.500 0.00 0.00 45.04 2.74
2284 5443 6.720748 TGGTGCATGATAATAGCAACCATATT 59.279 34.615 0.00 0.00 45.04 1.28
2285 5444 7.031372 GGTGCATGATAATAGCAACCATATTG 58.969 38.462 0.00 0.00 39.98 1.90
2286 5445 7.309377 GGTGCATGATAATAGCAACCATATTGT 60.309 37.037 0.00 0.00 39.98 2.71
2287 5446 8.084073 GTGCATGATAATAGCAACCATATTGTT 58.916 33.333 0.00 0.00 40.35 2.83
2288 5447 9.294614 TGCATGATAATAGCAACCATATTGTTA 57.705 29.630 0.00 0.00 34.97 2.41
2319 5478 3.634910 ACACTTGGTTAACCATGGTTGTC 59.365 43.478 35.49 26.32 46.97 3.18
2324 5483 5.941555 TGGTTAACCATGGTTGTCTTTTT 57.058 34.783 35.49 13.17 42.01 1.94
2351 5510 3.211045 TGTGCTTGTAGGAACAAAGGAC 58.789 45.455 0.00 0.00 44.79 3.85
2352 5511 3.118038 TGTGCTTGTAGGAACAAAGGACT 60.118 43.478 7.61 0.00 44.79 3.85
2361 5520 5.695424 AGGAACAAAGGACTAGATTACCC 57.305 43.478 0.00 0.00 0.00 3.69
2363 5522 5.731678 AGGAACAAAGGACTAGATTACCCAT 59.268 40.000 0.00 0.00 0.00 4.00
2368 5527 6.901300 ACAAAGGACTAGATTACCCATCTACA 59.099 38.462 0.00 0.00 40.85 2.74
2390 5549 1.067776 GTTGTAGACGACCAGAGTGGG 60.068 57.143 0.00 0.00 43.37 4.61
2392 5551 1.096416 GTAGACGACCAGAGTGGGAG 58.904 60.000 0.00 0.00 43.37 4.30
2422 5581 2.701951 AGAGTTTCGAACTGGGGTACAA 59.298 45.455 0.00 0.00 43.03 2.41
2426 5585 0.752054 TCGAACTGGGGTACAAACGT 59.248 50.000 0.00 0.00 0.00 3.99
2427 5586 1.142474 CGAACTGGGGTACAAACGTC 58.858 55.000 0.00 0.00 0.00 4.34
2432 5591 2.105134 ACTGGGGTACAAACGTCATCAA 59.895 45.455 0.00 0.00 0.00 2.57
2433 5592 3.244770 ACTGGGGTACAAACGTCATCAAT 60.245 43.478 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.106078 ACACTAGTTAAGCTTTCTCCTCTCG 60.106 44.000 3.20 0.00 0.00 4.04
1 2 6.096695 CACACTAGTTAAGCTTTCTCCTCTC 58.903 44.000 3.20 0.00 0.00 3.20
2 3 5.046950 CCACACTAGTTAAGCTTTCTCCTCT 60.047 44.000 3.20 0.00 0.00 3.69
3 4 5.172205 CCACACTAGTTAAGCTTTCTCCTC 58.828 45.833 3.20 0.00 0.00 3.71
4 5 4.563786 GCCACACTAGTTAAGCTTTCTCCT 60.564 45.833 3.20 0.00 0.00 3.69
5 6 3.685272 GCCACACTAGTTAAGCTTTCTCC 59.315 47.826 3.20 0.00 0.00 3.71
6 7 4.570930 AGCCACACTAGTTAAGCTTTCTC 58.429 43.478 3.20 0.00 0.00 2.87
7 8 4.570930 GAGCCACACTAGTTAAGCTTTCT 58.429 43.478 3.20 6.68 0.00 2.52
8 9 3.368236 CGAGCCACACTAGTTAAGCTTTC 59.632 47.826 3.20 0.00 0.00 2.62
9 10 3.326747 CGAGCCACACTAGTTAAGCTTT 58.673 45.455 3.20 0.00 0.00 3.51
10 11 2.353803 CCGAGCCACACTAGTTAAGCTT 60.354 50.000 3.48 3.48 0.00 3.74
11 12 1.204941 CCGAGCCACACTAGTTAAGCT 59.795 52.381 9.46 9.46 0.00 3.74
12 13 1.641577 CCGAGCCACACTAGTTAAGC 58.358 55.000 0.00 0.00 0.00 3.09
13 14 1.739371 GCCCGAGCCACACTAGTTAAG 60.739 57.143 0.00 0.00 0.00 1.85
14 15 0.248289 GCCCGAGCCACACTAGTTAA 59.752 55.000 0.00 0.00 0.00 2.01
15 16 0.901114 TGCCCGAGCCACACTAGTTA 60.901 55.000 0.00 0.00 38.69 2.24
16 17 1.553690 ATGCCCGAGCCACACTAGTT 61.554 55.000 0.00 0.00 38.69 2.24
17 18 1.553690 AATGCCCGAGCCACACTAGT 61.554 55.000 0.00 0.00 38.69 2.57
18 19 0.392998 AAATGCCCGAGCCACACTAG 60.393 55.000 0.00 0.00 38.69 2.57
19 20 0.037590 AAAATGCCCGAGCCACACTA 59.962 50.000 0.00 0.00 38.69 2.74
20 21 0.037590 TAAAATGCCCGAGCCACACT 59.962 50.000 0.00 0.00 38.69 3.55
21 22 1.065551 GATAAAATGCCCGAGCCACAC 59.934 52.381 0.00 0.00 38.69 3.82
22 23 1.388547 GATAAAATGCCCGAGCCACA 58.611 50.000 0.00 0.00 38.69 4.17
23 24 0.307760 CGATAAAATGCCCGAGCCAC 59.692 55.000 0.00 0.00 38.69 5.01
24 25 0.179234 TCGATAAAATGCCCGAGCCA 59.821 50.000 0.00 0.00 38.69 4.75
25 26 1.002792 GTTCGATAAAATGCCCGAGCC 60.003 52.381 0.00 0.00 38.69 4.70
26 27 1.668751 TGTTCGATAAAATGCCCGAGC 59.331 47.619 0.00 0.00 40.48 5.03
27 28 2.031683 GGTGTTCGATAAAATGCCCGAG 59.968 50.000 0.00 0.00 32.41 4.63
28 29 2.011222 GGTGTTCGATAAAATGCCCGA 58.989 47.619 0.00 0.00 0.00 5.14
29 30 2.014128 AGGTGTTCGATAAAATGCCCG 58.986 47.619 0.00 0.00 0.00 6.13
30 31 3.013921 TGAGGTGTTCGATAAAATGCCC 58.986 45.455 0.00 0.00 0.00 5.36
31 32 4.096382 ACATGAGGTGTTCGATAAAATGCC 59.904 41.667 0.00 0.00 38.01 4.40
32 33 5.030295 CACATGAGGTGTTCGATAAAATGC 58.970 41.667 0.00 0.00 42.75 3.56
48 49 2.806019 GCTCACCTCCTATGCACATGAG 60.806 54.545 0.00 0.00 36.11 2.90
49 50 1.139654 GCTCACCTCCTATGCACATGA 59.860 52.381 0.00 0.00 0.00 3.07
50 51 1.140452 AGCTCACCTCCTATGCACATG 59.860 52.381 0.00 0.00 0.00 3.21
51 52 1.504912 AGCTCACCTCCTATGCACAT 58.495 50.000 0.00 0.00 0.00 3.21
52 53 2.034878 CTAGCTCACCTCCTATGCACA 58.965 52.381 0.00 0.00 0.00 4.57
53 54 2.295909 CTCTAGCTCACCTCCTATGCAC 59.704 54.545 0.00 0.00 0.00 4.57
54 55 2.591923 CTCTAGCTCACCTCCTATGCA 58.408 52.381 0.00 0.00 0.00 3.96
55 56 1.272212 GCTCTAGCTCACCTCCTATGC 59.728 57.143 0.00 0.00 38.21 3.14
56 57 2.295909 GTGCTCTAGCTCACCTCCTATG 59.704 54.545 3.26 0.00 42.66 2.23
57 58 2.593026 GTGCTCTAGCTCACCTCCTAT 58.407 52.381 3.26 0.00 42.66 2.57
58 59 1.410365 GGTGCTCTAGCTCACCTCCTA 60.410 57.143 19.69 0.00 46.90 2.94
59 60 0.686112 GGTGCTCTAGCTCACCTCCT 60.686 60.000 19.69 0.00 46.90 3.69
60 61 1.819905 GGTGCTCTAGCTCACCTCC 59.180 63.158 19.69 0.00 46.90 4.30
64 65 2.072298 CTTTGTGGTGCTCTAGCTCAC 58.928 52.381 16.47 16.47 41.99 3.51
65 66 1.609061 GCTTTGTGGTGCTCTAGCTCA 60.609 52.381 3.26 0.00 42.66 4.26
66 67 1.082690 GCTTTGTGGTGCTCTAGCTC 58.917 55.000 3.26 0.00 42.66 4.09
67 68 0.689623 AGCTTTGTGGTGCTCTAGCT 59.310 50.000 3.26 0.00 42.66 3.32
68 69 3.239861 AGCTTTGTGGTGCTCTAGC 57.760 52.632 0.00 0.00 42.50 3.42
73 74 1.073897 GGGAGAGCTTTGTGGTGCT 59.926 57.895 0.00 0.00 42.82 4.40
74 75 1.973812 GGGGAGAGCTTTGTGGTGC 60.974 63.158 0.00 0.00 0.00 5.01
75 76 0.322008 GAGGGGAGAGCTTTGTGGTG 60.322 60.000 0.00 0.00 0.00 4.17
76 77 1.831652 CGAGGGGAGAGCTTTGTGGT 61.832 60.000 0.00 0.00 0.00 4.16
77 78 1.078848 CGAGGGGAGAGCTTTGTGG 60.079 63.158 0.00 0.00 0.00 4.17
78 79 1.743252 GCGAGGGGAGAGCTTTGTG 60.743 63.158 0.00 0.00 0.00 3.33
79 80 2.665603 GCGAGGGGAGAGCTTTGT 59.334 61.111 0.00 0.00 0.00 2.83
80 81 2.124942 GGCGAGGGGAGAGCTTTG 60.125 66.667 0.00 0.00 0.00 2.77
81 82 3.775654 CGGCGAGGGGAGAGCTTT 61.776 66.667 0.00 0.00 0.00 3.51
90 91 4.715523 TTTTCTGGCCGGCGAGGG 62.716 66.667 34.26 14.73 41.48 4.30
91 92 2.671619 TTTTTCTGGCCGGCGAGG 60.672 61.111 34.26 20.12 44.97 4.63
111 112 1.935799 AGATCACTCCACAGTGCTCT 58.064 50.000 3.23 3.23 46.73 4.09
116 117 0.529833 CGAGCAGATCACTCCACAGT 59.470 55.000 9.47 0.00 0.00 3.55
117 118 0.805322 GCGAGCAGATCACTCCACAG 60.805 60.000 9.47 0.00 0.00 3.66
118 119 1.216444 GCGAGCAGATCACTCCACA 59.784 57.895 9.47 0.00 0.00 4.17
119 120 0.805322 CTGCGAGCAGATCACTCCAC 60.805 60.000 19.40 4.16 46.30 4.02
120 121 1.514553 CTGCGAGCAGATCACTCCA 59.485 57.895 19.40 7.91 46.30 3.86
121 122 1.227205 CCTGCGAGCAGATCACTCC 60.227 63.158 24.93 4.52 46.30 3.85
122 123 1.882167 GCCTGCGAGCAGATCACTC 60.882 63.158 24.93 5.85 46.30 3.51
123 124 2.186384 GCCTGCGAGCAGATCACT 59.814 61.111 24.93 0.00 46.30 3.41
124 125 3.260483 CGCCTGCGAGCAGATCAC 61.260 66.667 24.93 10.97 46.30 3.06
125 126 3.451894 TCGCCTGCGAGCAGATCA 61.452 61.111 24.93 6.24 46.30 2.92
133 134 0.038599 TATATACCCCTCGCCTGCGA 59.961 55.000 14.13 14.13 46.87 5.10
134 135 1.112113 ATATATACCCCTCGCCTGCG 58.888 55.000 4.92 4.92 41.35 5.18
135 136 2.628657 CCTATATATACCCCTCGCCTGC 59.371 54.545 0.00 0.00 0.00 4.85
136 137 2.628657 GCCTATATATACCCCTCGCCTG 59.371 54.545 0.00 0.00 0.00 4.85
137 138 2.246588 TGCCTATATATACCCCTCGCCT 59.753 50.000 0.00 0.00 0.00 5.52
138 139 2.674420 TGCCTATATATACCCCTCGCC 58.326 52.381 0.00 0.00 0.00 5.54
139 140 4.748277 TTTGCCTATATATACCCCTCGC 57.252 45.455 0.00 0.00 0.00 5.03
140 141 6.479972 TGATTTGCCTATATATACCCCTCG 57.520 41.667 0.00 0.00 0.00 4.63
141 142 7.721399 CCAATGATTTGCCTATATATACCCCTC 59.279 40.741 0.00 0.00 0.00 4.30
142 143 7.186409 ACCAATGATTTGCCTATATATACCCCT 59.814 37.037 0.00 0.00 0.00 4.79
143 144 7.354312 ACCAATGATTTGCCTATATATACCCC 58.646 38.462 0.00 0.00 0.00 4.95
144 145 7.502561 GGACCAATGATTTGCCTATATATACCC 59.497 40.741 0.00 0.00 0.00 3.69
145 146 7.502561 GGGACCAATGATTTGCCTATATATACC 59.497 40.741 0.00 0.00 0.00 2.73
146 147 7.226720 CGGGACCAATGATTTGCCTATATATAC 59.773 40.741 0.00 0.00 0.00 1.47
147 148 7.279615 CGGGACCAATGATTTGCCTATATATA 58.720 38.462 0.00 0.00 0.00 0.86
148 149 6.122277 CGGGACCAATGATTTGCCTATATAT 58.878 40.000 0.00 0.00 0.00 0.86
149 150 5.496556 CGGGACCAATGATTTGCCTATATA 58.503 41.667 0.00 0.00 0.00 0.86
150 151 4.335416 CGGGACCAATGATTTGCCTATAT 58.665 43.478 0.00 0.00 0.00 0.86
151 152 3.497763 CCGGGACCAATGATTTGCCTATA 60.498 47.826 0.00 0.00 0.00 1.31
152 153 2.586425 CGGGACCAATGATTTGCCTAT 58.414 47.619 0.00 0.00 0.00 2.57
153 154 1.409521 CCGGGACCAATGATTTGCCTA 60.410 52.381 0.00 0.00 0.00 3.93
154 155 0.684153 CCGGGACCAATGATTTGCCT 60.684 55.000 0.00 0.00 0.00 4.75
155 156 0.970427 ACCGGGACCAATGATTTGCC 60.970 55.000 6.32 0.00 0.00 4.52
156 157 0.894835 AACCGGGACCAATGATTTGC 59.105 50.000 6.32 0.00 0.00 3.68
157 158 2.166829 TGAACCGGGACCAATGATTTG 58.833 47.619 6.32 0.00 0.00 2.32
158 159 2.595750 TGAACCGGGACCAATGATTT 57.404 45.000 6.32 0.00 0.00 2.17
159 160 2.826674 ATGAACCGGGACCAATGATT 57.173 45.000 6.32 0.00 0.00 2.57
160 161 2.487265 GCTATGAACCGGGACCAATGAT 60.487 50.000 6.32 0.00 0.00 2.45
161 162 1.134220 GCTATGAACCGGGACCAATGA 60.134 52.381 6.32 0.00 0.00 2.57
162 163 1.134098 AGCTATGAACCGGGACCAATG 60.134 52.381 6.32 0.00 0.00 2.82
163 164 1.134098 CAGCTATGAACCGGGACCAAT 60.134 52.381 6.32 0.00 0.00 3.16
164 165 0.251916 CAGCTATGAACCGGGACCAA 59.748 55.000 6.32 0.00 0.00 3.67
165 166 1.622607 CCAGCTATGAACCGGGACCA 61.623 60.000 6.32 0.00 0.00 4.02
166 167 1.146263 CCAGCTATGAACCGGGACC 59.854 63.158 6.32 0.00 0.00 4.46
167 168 0.539986 TTCCAGCTATGAACCGGGAC 59.460 55.000 6.32 0.00 0.00 4.46
168 169 0.539986 GTTCCAGCTATGAACCGGGA 59.460 55.000 6.32 0.00 36.87 5.14
169 170 3.080647 GTTCCAGCTATGAACCGGG 57.919 57.895 6.32 0.00 36.87 5.73
173 174 0.539986 TCCCGGTTCCAGCTATGAAC 59.460 55.000 16.26 16.26 41.05 3.18
174 175 0.539986 GTCCCGGTTCCAGCTATGAA 59.460 55.000 0.00 0.00 0.00 2.57
175 176 0.325296 AGTCCCGGTTCCAGCTATGA 60.325 55.000 0.00 0.00 0.00 2.15
176 177 1.410004 TAGTCCCGGTTCCAGCTATG 58.590 55.000 0.00 0.00 0.00 2.23
177 178 2.170012 TTAGTCCCGGTTCCAGCTAT 57.830 50.000 0.00 0.00 0.00 2.97
178 179 1.829222 CTTTAGTCCCGGTTCCAGCTA 59.171 52.381 0.00 0.00 0.00 3.32
179 180 0.613777 CTTTAGTCCCGGTTCCAGCT 59.386 55.000 0.00 0.00 0.00 4.24
180 181 0.392595 CCTTTAGTCCCGGTTCCAGC 60.393 60.000 0.00 0.00 0.00 4.85
181 182 1.066358 GTCCTTTAGTCCCGGTTCCAG 60.066 57.143 0.00 0.00 0.00 3.86
182 183 0.978907 GTCCTTTAGTCCCGGTTCCA 59.021 55.000 0.00 0.00 0.00 3.53
183 184 0.251354 GGTCCTTTAGTCCCGGTTCC 59.749 60.000 0.00 0.00 0.00 3.62
184 185 0.251354 GGGTCCTTTAGTCCCGGTTC 59.749 60.000 0.00 0.00 0.00 3.62
185 186 1.203441 GGGGTCCTTTAGTCCCGGTT 61.203 60.000 0.00 0.00 41.92 4.44
186 187 1.614525 GGGGTCCTTTAGTCCCGGT 60.615 63.158 0.00 0.00 41.92 5.28
187 188 2.372890 GGGGGTCCTTTAGTCCCGG 61.373 68.421 0.00 0.00 41.92 5.73
188 189 1.306739 AGGGGGTCCTTTAGTCCCG 60.307 63.158 0.00 0.00 41.56 5.14
189 190 4.935925 AGGGGGTCCTTTAGTCCC 57.064 61.111 0.00 0.00 41.56 4.46
210 211 1.880819 TTCGTGCCTAGAACCGGGAC 61.881 60.000 6.32 0.00 39.24 4.46
211 212 1.607178 TTCGTGCCTAGAACCGGGA 60.607 57.895 6.32 0.00 0.00 5.14
212 213 1.447314 GTTCGTGCCTAGAACCGGG 60.447 63.158 6.32 0.00 41.38 5.73
213 214 4.180496 GTTCGTGCCTAGAACCGG 57.820 61.111 0.00 0.00 41.38 5.28
216 217 1.447314 CCCGGTTCGTGCCTAGAAC 60.447 63.158 0.00 7.30 45.16 3.01
217 218 1.607178 TCCCGGTTCGTGCCTAGAA 60.607 57.895 0.00 0.00 0.00 2.10
218 219 2.036098 TCCCGGTTCGTGCCTAGA 59.964 61.111 0.00 0.00 0.00 2.43
219 220 2.183555 GTCCCGGTTCGTGCCTAG 59.816 66.667 0.00 0.00 0.00 3.02
220 221 3.384532 GGTCCCGGTTCGTGCCTA 61.385 66.667 0.00 0.00 0.00 3.93
222 223 3.912745 ATTGGTCCCGGTTCGTGCC 62.913 63.158 0.00 0.00 0.00 5.01
223 224 2.359478 ATTGGTCCCGGTTCGTGC 60.359 61.111 0.00 0.00 0.00 5.34
224 225 1.296056 GACATTGGTCCCGGTTCGTG 61.296 60.000 0.00 0.00 38.12 4.35
225 226 1.004200 GACATTGGTCCCGGTTCGT 60.004 57.895 0.00 0.00 38.12 3.85
226 227 1.019278 CAGACATTGGTCCCGGTTCG 61.019 60.000 0.00 0.00 45.48 3.95
227 228 0.036306 ACAGACATTGGTCCCGGTTC 59.964 55.000 0.00 0.00 45.48 3.62
228 229 0.250727 CACAGACATTGGTCCCGGTT 60.251 55.000 0.00 0.00 45.48 4.44
229 230 1.374947 CACAGACATTGGTCCCGGT 59.625 57.895 0.00 0.00 45.48 5.28
230 231 1.377202 CCACAGACATTGGTCCCGG 60.377 63.158 0.00 0.00 45.48 5.73
231 232 1.377202 CCCACAGACATTGGTCCCG 60.377 63.158 0.00 0.00 45.48 5.14
232 233 1.678970 GCCCACAGACATTGGTCCC 60.679 63.158 0.00 0.00 45.48 4.46
233 234 1.678970 GGCCCACAGACATTGGTCC 60.679 63.158 0.00 0.00 45.48 4.46
234 235 1.074775 TGGCCCACAGACATTGGTC 59.925 57.895 0.00 0.00 44.66 4.02
235 236 3.260297 TGGCCCACAGACATTGGT 58.740 55.556 0.00 0.00 31.46 3.67
244 245 4.641645 CCTCGTTGCTGGCCCACA 62.642 66.667 0.00 0.00 0.00 4.17
245 246 4.643387 ACCTCGTTGCTGGCCCAC 62.643 66.667 0.00 0.00 0.00 4.61
246 247 4.329545 GACCTCGTTGCTGGCCCA 62.330 66.667 0.00 0.00 0.00 5.36
248 249 3.628646 ATGGACCTCGTTGCTGGCC 62.629 63.158 0.00 0.00 0.00 5.36
249 250 1.675641 AATGGACCTCGTTGCTGGC 60.676 57.895 0.00 0.00 0.00 4.85
250 251 1.308069 CCAATGGACCTCGTTGCTGG 61.308 60.000 0.00 0.00 40.20 4.85
251 252 0.606401 ACCAATGGACCTCGTTGCTG 60.606 55.000 6.16 0.00 40.20 4.41
252 253 0.321653 GACCAATGGACCTCGTTGCT 60.322 55.000 6.16 0.00 40.20 3.91
253 254 1.305930 GGACCAATGGACCTCGTTGC 61.306 60.000 13.46 0.00 40.20 4.17
254 255 0.676782 GGGACCAATGGACCTCGTTG 60.677 60.000 19.42 0.00 40.98 4.10
255 256 1.683441 GGGACCAATGGACCTCGTT 59.317 57.895 19.42 0.00 37.65 3.85
256 257 2.656069 CGGGACCAATGGACCTCGT 61.656 63.158 19.42 0.00 37.65 4.18
257 258 2.186903 CGGGACCAATGGACCTCG 59.813 66.667 19.42 16.50 37.65 4.63
258 259 1.848886 AACCGGGACCAATGGACCTC 61.849 60.000 19.42 9.44 37.65 3.85
259 260 1.848886 GAACCGGGACCAATGGACCT 61.849 60.000 19.42 0.28 37.65 3.85
260 261 1.378119 GAACCGGGACCAATGGACC 60.378 63.158 12.37 12.37 36.82 4.46
261 262 1.743995 CGAACCGGGACCAATGGAC 60.744 63.158 6.16 0.00 0.00 4.02
262 263 2.218454 ACGAACCGGGACCAATGGA 61.218 57.895 6.16 0.00 0.00 3.41
263 264 2.038269 CACGAACCGGGACCAATGG 61.038 63.158 6.32 0.00 28.17 3.16
264 265 2.686816 GCACGAACCGGGACCAATG 61.687 63.158 6.32 0.00 28.17 2.82
265 266 2.359478 GCACGAACCGGGACCAAT 60.359 61.111 6.32 0.00 28.17 3.16
266 267 4.629523 GGCACGAACCGGGACCAA 62.630 66.667 6.32 0.00 28.34 3.67
271 272 4.323477 TTCCAGGCACGAACCGGG 62.323 66.667 6.32 10.44 45.63 5.73
272 273 3.047877 GTTCCAGGCACGAACCGG 61.048 66.667 0.00 0.00 34.75 5.28
275 276 3.047877 CCGGTTCCAGGCACGAAC 61.048 66.667 7.88 7.88 39.12 3.95
276 277 4.323477 CCCGGTTCCAGGCACGAA 62.323 66.667 0.00 0.00 0.00 3.85
279 280 2.969300 TTTGTCCCGGTTCCAGGCAC 62.969 60.000 0.00 0.00 0.00 5.01
280 281 2.075355 ATTTGTCCCGGTTCCAGGCA 62.075 55.000 0.00 0.00 0.00 4.75
281 282 1.304134 ATTTGTCCCGGTTCCAGGC 60.304 57.895 0.00 0.00 0.00 4.85
282 283 0.965363 CCATTTGTCCCGGTTCCAGG 60.965 60.000 0.00 0.00 0.00 4.45
283 284 0.965363 CCCATTTGTCCCGGTTCCAG 60.965 60.000 0.00 0.00 0.00 3.86
284 285 1.075836 CCCATTTGTCCCGGTTCCA 59.924 57.895 0.00 0.00 0.00 3.53
285 286 0.963856 GACCCATTTGTCCCGGTTCC 60.964 60.000 0.00 0.00 0.00 3.62
286 287 2.563297 GACCCATTTGTCCCGGTTC 58.437 57.895 0.00 0.00 0.00 3.62
287 288 4.834911 GACCCATTTGTCCCGGTT 57.165 55.556 0.00 0.00 0.00 4.44
293 294 1.265905 GTTCGTGTGGACCCATTTGTC 59.734 52.381 0.00 0.00 34.42 3.18
294 295 1.314730 GTTCGTGTGGACCCATTTGT 58.685 50.000 0.00 0.00 0.00 2.83
295 296 0.596082 GGTTCGTGTGGACCCATTTG 59.404 55.000 0.00 0.00 0.00 2.32
296 297 0.887387 CGGTTCGTGTGGACCCATTT 60.887 55.000 0.00 0.00 0.00 2.32
297 298 1.302192 CGGTTCGTGTGGACCCATT 60.302 57.895 0.00 0.00 0.00 3.16
298 299 2.345991 CGGTTCGTGTGGACCCAT 59.654 61.111 0.00 0.00 0.00 4.00
299 300 3.931247 CCGGTTCGTGTGGACCCA 61.931 66.667 0.00 0.00 0.00 4.51
300 301 4.692475 CCCGGTTCGTGTGGACCC 62.692 72.222 0.00 0.00 0.00 4.46
301 302 3.618750 TCCCGGTTCGTGTGGACC 61.619 66.667 0.00 0.00 0.00 4.46
302 303 2.356673 GTCCCGGTTCGTGTGGAC 60.357 66.667 0.00 0.00 40.40 4.02
303 304 1.969200 TTTGTCCCGGTTCGTGTGGA 61.969 55.000 0.00 0.00 0.00 4.02
304 305 0.887387 ATTTGTCCCGGTTCGTGTGG 60.887 55.000 0.00 0.00 0.00 4.17
305 306 0.237235 CATTTGTCCCGGTTCGTGTG 59.763 55.000 0.00 0.00 0.00 3.82
306 307 1.512156 GCATTTGTCCCGGTTCGTGT 61.512 55.000 0.00 0.00 0.00 4.49
307 308 1.209127 GCATTTGTCCCGGTTCGTG 59.791 57.895 0.00 0.00 0.00 4.35
308 309 1.969589 GGCATTTGTCCCGGTTCGT 60.970 57.895 0.00 0.00 0.00 3.85
309 310 1.644786 GAGGCATTTGTCCCGGTTCG 61.645 60.000 0.00 0.00 0.00 3.95
310 311 1.313091 GGAGGCATTTGTCCCGGTTC 61.313 60.000 0.00 0.00 0.00 3.62
311 312 1.304134 GGAGGCATTTGTCCCGGTT 60.304 57.895 0.00 0.00 0.00 4.44
312 313 2.355115 GGAGGCATTTGTCCCGGT 59.645 61.111 0.00 0.00 0.00 5.28
313 314 2.440247 GGGAGGCATTTGTCCCGG 60.440 66.667 0.00 0.00 43.27 5.73
316 317 1.452108 CCTCGGGAGGCATTTGTCC 60.452 63.158 1.02 0.00 42.44 4.02
317 318 4.225497 CCTCGGGAGGCATTTGTC 57.775 61.111 1.02 0.00 42.44 3.18
353 354 3.688475 ATACGTCCCGGTTCGTGCG 62.688 63.158 24.43 11.66 40.50 5.34
354 355 2.162754 CATACGTCCCGGTTCGTGC 61.163 63.158 24.43 0.00 40.50 5.34
355 356 2.162754 GCATACGTCCCGGTTCGTG 61.163 63.158 24.43 13.76 40.50 4.35
356 357 2.182537 GCATACGTCCCGGTTCGT 59.817 61.111 21.14 21.14 42.82 3.85
357 358 2.584143 GGCATACGTCCCGGTTCG 60.584 66.667 12.74 12.74 0.00 3.95
358 359 2.202974 GGGCATACGTCCCGGTTC 60.203 66.667 0.00 0.00 33.43 3.62
364 365 0.320697 GACCTATGGGGCATACGTCC 59.679 60.000 0.00 0.00 41.30 4.79
365 366 0.320697 GGACCTATGGGGCATACGTC 59.679 60.000 2.17 0.00 44.19 4.34
366 367 1.125711 GGGACCTATGGGGCATACGT 61.126 60.000 2.17 0.00 44.19 3.57
367 368 1.677552 GGGACCTATGGGGCATACG 59.322 63.158 2.17 0.00 44.19 3.06
368 369 1.677552 CGGGACCTATGGGGCATAC 59.322 63.158 2.17 0.00 44.19 2.39
369 370 1.537889 CCGGGACCTATGGGGCATA 60.538 63.158 2.17 0.00 44.19 3.14
370 371 2.854032 CCGGGACCTATGGGGCAT 60.854 66.667 2.17 0.00 44.19 4.40
371 372 3.954740 AACCGGGACCTATGGGGCA 62.955 63.158 6.32 0.00 44.19 5.36
372 373 3.094498 AACCGGGACCTATGGGGC 61.094 66.667 6.32 0.00 40.80 5.80
373 374 2.803817 CGAACCGGGACCTATGGGG 61.804 68.421 6.32 0.00 41.89 4.96
374 375 2.062177 ACGAACCGGGACCTATGGG 61.062 63.158 6.32 0.00 38.88 4.00
375 376 1.143183 CACGAACCGGGACCTATGG 59.857 63.158 6.32 0.00 28.17 2.74
376 377 2.195389 TCACGAACCGGGACCTATG 58.805 57.895 6.32 0.00 32.99 2.23
377 378 4.770540 TCACGAACCGGGACCTAT 57.229 55.556 6.32 0.00 32.99 2.57
382 383 1.364901 GTTCTGTCACGAACCGGGA 59.635 57.895 6.32 0.00 36.75 5.14
383 384 3.946907 GTTCTGTCACGAACCGGG 58.053 61.111 6.32 0.00 37.82 5.73
387 388 0.037605 ATCCCGGTTCTGTCACGAAC 60.038 55.000 0.00 4.51 41.91 3.95
388 389 0.682852 AATCCCGGTTCTGTCACGAA 59.317 50.000 0.00 0.00 0.00 3.85
389 390 1.548081 TAATCCCGGTTCTGTCACGA 58.452 50.000 0.00 0.00 0.00 4.35
390 391 2.373540 TTAATCCCGGTTCTGTCACG 57.626 50.000 0.00 0.00 0.00 4.35
391 392 2.943033 CCATTAATCCCGGTTCTGTCAC 59.057 50.000 0.00 0.00 0.00 3.67
392 393 2.092646 CCCATTAATCCCGGTTCTGTCA 60.093 50.000 0.00 0.00 0.00 3.58
393 394 2.572290 CCCATTAATCCCGGTTCTGTC 58.428 52.381 0.00 0.00 0.00 3.51
394 395 1.409661 GCCCATTAATCCCGGTTCTGT 60.410 52.381 0.00 0.00 0.00 3.41
395 396 1.133792 AGCCCATTAATCCCGGTTCTG 60.134 52.381 0.00 0.00 0.00 3.02
396 397 1.133792 CAGCCCATTAATCCCGGTTCT 60.134 52.381 0.00 0.00 0.00 3.01
397 398 1.318576 CAGCCCATTAATCCCGGTTC 58.681 55.000 0.00 0.00 0.00 3.62
398 399 0.106217 CCAGCCCATTAATCCCGGTT 60.106 55.000 0.00 0.00 0.00 4.44
399 400 1.536676 CCAGCCCATTAATCCCGGT 59.463 57.895 0.00 0.00 0.00 5.28
400 401 1.903404 GCCAGCCCATTAATCCCGG 60.903 63.158 0.00 0.00 0.00 5.73
401 402 1.903404 GGCCAGCCCATTAATCCCG 60.903 63.158 0.00 0.00 0.00 5.14
402 403 0.829182 CTGGCCAGCCCATTAATCCC 60.829 60.000 22.33 0.00 44.33 3.85
403 404 0.829182 CCTGGCCAGCCCATTAATCC 60.829 60.000 28.39 0.00 44.33 3.01
404 405 1.466851 GCCTGGCCAGCCCATTAATC 61.467 60.000 28.39 3.17 44.33 1.75
405 406 1.458209 GCCTGGCCAGCCCATTAAT 60.458 57.895 28.39 0.00 44.33 1.40
406 407 2.043046 GCCTGGCCAGCCCATTAA 60.043 61.111 28.39 0.00 44.33 1.40
423 424 3.833553 AACAGGGCTTTGGCTGGGG 62.834 63.158 0.00 0.00 38.73 4.96
424 425 1.410050 AAAACAGGGCTTTGGCTGGG 61.410 55.000 0.00 0.00 38.73 4.45
425 426 0.033920 GAAAACAGGGCTTTGGCTGG 59.966 55.000 0.00 0.00 38.73 4.85
426 427 1.043022 AGAAAACAGGGCTTTGGCTG 58.957 50.000 0.00 0.00 38.73 4.85
427 428 2.158460 AGTAGAAAACAGGGCTTTGGCT 60.158 45.455 0.00 0.00 38.73 4.75
428 429 2.239400 AGTAGAAAACAGGGCTTTGGC 58.761 47.619 0.00 0.00 37.82 4.52
429 430 4.455877 CACTAGTAGAAAACAGGGCTTTGG 59.544 45.833 3.59 0.00 0.00 3.28
430 431 4.455877 CCACTAGTAGAAAACAGGGCTTTG 59.544 45.833 3.59 0.00 0.00 2.77
431 432 4.104261 ACCACTAGTAGAAAACAGGGCTTT 59.896 41.667 3.59 0.00 0.00 3.51
432 433 3.651423 ACCACTAGTAGAAAACAGGGCTT 59.349 43.478 3.59 0.00 0.00 4.35
433 434 3.248888 ACCACTAGTAGAAAACAGGGCT 58.751 45.455 3.59 0.00 0.00 5.19
434 435 3.697619 ACCACTAGTAGAAAACAGGGC 57.302 47.619 3.59 0.00 0.00 5.19
435 436 3.751698 GCAACCACTAGTAGAAAACAGGG 59.248 47.826 3.59 0.00 0.00 4.45
436 437 4.385825 TGCAACCACTAGTAGAAAACAGG 58.614 43.478 3.59 0.00 0.00 4.00
437 438 5.558273 CGTTGCAACCACTAGTAGAAAACAG 60.558 44.000 23.42 0.00 0.00 3.16
438 439 4.271533 CGTTGCAACCACTAGTAGAAAACA 59.728 41.667 23.42 0.00 0.00 2.83
439 440 4.769215 CGTTGCAACCACTAGTAGAAAAC 58.231 43.478 23.42 0.00 0.00 2.43
440 441 3.249080 GCGTTGCAACCACTAGTAGAAAA 59.751 43.478 23.42 0.00 0.00 2.29
441 442 2.803956 GCGTTGCAACCACTAGTAGAAA 59.196 45.455 23.42 0.00 0.00 2.52
442 443 2.224090 TGCGTTGCAACCACTAGTAGAA 60.224 45.455 23.42 0.00 34.76 2.10
443 444 1.341852 TGCGTTGCAACCACTAGTAGA 59.658 47.619 23.42 0.00 34.76 2.59
444 445 1.459592 GTGCGTTGCAACCACTAGTAG 59.540 52.381 28.90 14.97 41.47 2.57
445 446 1.504359 GTGCGTTGCAACCACTAGTA 58.496 50.000 28.90 13.57 41.47 1.82
446 447 1.495584 CGTGCGTTGCAACCACTAGT 61.496 55.000 30.84 0.00 41.47 2.57
447 448 1.204062 CGTGCGTTGCAACCACTAG 59.796 57.895 30.84 20.73 41.47 2.57
448 449 2.248135 CCGTGCGTTGCAACCACTA 61.248 57.895 30.84 14.31 41.47 2.74
449 450 3.582120 CCGTGCGTTGCAACCACT 61.582 61.111 30.84 0.00 41.47 4.00
450 451 4.622456 CCCGTGCGTTGCAACCAC 62.622 66.667 27.55 27.55 41.47 4.16
453 454 3.839642 AATGCCCGTGCGTTGCAAC 62.840 57.895 19.89 19.89 44.90 4.17
454 455 1.796190 TAAATGCCCGTGCGTTGCAA 61.796 50.000 0.00 0.00 45.88 4.08
455 456 1.590610 ATAAATGCCCGTGCGTTGCA 61.591 50.000 0.00 8.11 45.88 4.08
456 457 0.378962 TATAAATGCCCGTGCGTTGC 59.621 50.000 0.00 0.00 45.88 4.17
457 458 1.668751 AGTATAAATGCCCGTGCGTTG 59.331 47.619 0.00 0.00 45.88 4.10
459 460 2.101917 ACTAGTATAAATGCCCGTGCGT 59.898 45.455 0.00 0.00 41.78 5.24
460 461 2.750948 ACTAGTATAAATGCCCGTGCG 58.249 47.619 0.00 0.00 41.78 5.34
461 462 7.762615 TGATAATACTAGTATAAATGCCCGTGC 59.237 37.037 15.74 1.33 38.26 5.34
462 463 9.302345 CTGATAATACTAGTATAAATGCCCGTG 57.698 37.037 15.74 0.00 0.00 4.94
463 464 9.251440 TCTGATAATACTAGTATAAATGCCCGT 57.749 33.333 15.74 0.00 0.00 5.28
464 465 9.737427 CTCTGATAATACTAGTATAAATGCCCG 57.263 37.037 15.74 1.50 0.00 6.13
475 476 8.932434 TGCTTGATCTCTCTGATAATACTAGT 57.068 34.615 0.00 0.00 35.14 2.57
478 479 8.703743 ACTTTGCTTGATCTCTCTGATAATACT 58.296 33.333 0.00 0.00 35.14 2.12
479 480 8.885494 ACTTTGCTTGATCTCTCTGATAATAC 57.115 34.615 0.00 0.00 35.14 1.89
481 482 9.491675 CATACTTTGCTTGATCTCTCTGATAAT 57.508 33.333 0.00 0.00 35.14 1.28
482 483 7.930325 CCATACTTTGCTTGATCTCTCTGATAA 59.070 37.037 0.00 0.00 35.14 1.75
483 484 7.288621 TCCATACTTTGCTTGATCTCTCTGATA 59.711 37.037 0.00 0.00 35.14 2.15
484 485 6.099413 TCCATACTTTGCTTGATCTCTCTGAT 59.901 38.462 0.00 0.00 38.27 2.90
485 486 5.423290 TCCATACTTTGCTTGATCTCTCTGA 59.577 40.000 0.00 0.00 0.00 3.27
486 487 5.668471 TCCATACTTTGCTTGATCTCTCTG 58.332 41.667 0.00 0.00 0.00 3.35
487 488 5.163322 CCTCCATACTTTGCTTGATCTCTCT 60.163 44.000 0.00 0.00 0.00 3.10
488 489 5.055812 CCTCCATACTTTGCTTGATCTCTC 58.944 45.833 0.00 0.00 0.00 3.20
489 490 4.718774 TCCTCCATACTTTGCTTGATCTCT 59.281 41.667 0.00 0.00 0.00 3.10
490 491 5.028549 TCCTCCATACTTTGCTTGATCTC 57.971 43.478 0.00 0.00 0.00 2.75
491 492 5.189180 GTTCCTCCATACTTTGCTTGATCT 58.811 41.667 0.00 0.00 0.00 2.75
492 493 4.034510 CGTTCCTCCATACTTTGCTTGATC 59.965 45.833 0.00 0.00 0.00 2.92
493 494 3.941483 CGTTCCTCCATACTTTGCTTGAT 59.059 43.478 0.00 0.00 0.00 2.57
494 495 3.244422 ACGTTCCTCCATACTTTGCTTGA 60.244 43.478 0.00 0.00 0.00 3.02
495 496 3.074412 ACGTTCCTCCATACTTTGCTTG 58.926 45.455 0.00 0.00 0.00 4.01
496 497 3.074412 CACGTTCCTCCATACTTTGCTT 58.926 45.455 0.00 0.00 0.00 3.91
497 498 2.301870 TCACGTTCCTCCATACTTTGCT 59.698 45.455 0.00 0.00 0.00 3.91
498 499 2.415512 GTCACGTTCCTCCATACTTTGC 59.584 50.000 0.00 0.00 0.00 3.68
499 500 3.926616 AGTCACGTTCCTCCATACTTTG 58.073 45.455 0.00 0.00 0.00 2.77
500 501 3.833070 AGAGTCACGTTCCTCCATACTTT 59.167 43.478 7.45 0.00 0.00 2.66
501 502 3.432378 AGAGTCACGTTCCTCCATACTT 58.568 45.455 7.45 0.00 0.00 2.24
502 503 3.088789 AGAGTCACGTTCCTCCATACT 57.911 47.619 7.45 0.00 0.00 2.12
503 504 3.444388 AGAAGAGTCACGTTCCTCCATAC 59.556 47.826 7.45 0.00 0.00 2.39
504 505 3.698289 AGAAGAGTCACGTTCCTCCATA 58.302 45.455 7.45 0.00 0.00 2.74
505 506 2.530701 AGAAGAGTCACGTTCCTCCAT 58.469 47.619 7.45 0.00 0.00 3.41
506 507 1.996798 AGAAGAGTCACGTTCCTCCA 58.003 50.000 7.45 0.00 0.00 3.86
507 508 4.722361 AATAGAAGAGTCACGTTCCTCC 57.278 45.455 7.45 0.00 0.00 4.30
508 509 6.439675 AGTAATAGAAGAGTCACGTTCCTC 57.560 41.667 3.53 3.53 0.00 3.71
509 510 5.064962 CGAGTAATAGAAGAGTCACGTTCCT 59.935 44.000 0.00 0.00 0.00 3.36
510 511 5.163774 ACGAGTAATAGAAGAGTCACGTTCC 60.164 44.000 0.00 0.00 0.00 3.62
511 512 5.867166 ACGAGTAATAGAAGAGTCACGTTC 58.133 41.667 0.00 0.00 0.00 3.95
512 513 5.876612 ACGAGTAATAGAAGAGTCACGTT 57.123 39.130 0.00 0.00 0.00 3.99
513 514 8.710551 CATATACGAGTAATAGAAGAGTCACGT 58.289 37.037 0.00 0.00 0.00 4.49
514 515 8.710551 ACATATACGAGTAATAGAAGAGTCACG 58.289 37.037 0.00 0.00 0.00 4.35
516 517 8.923683 CGACATATACGAGTAATAGAAGAGTCA 58.076 37.037 0.00 0.00 0.00 3.41
517 518 8.924691 ACGACATATACGAGTAATAGAAGAGTC 58.075 37.037 8.17 0.00 34.70 3.36
518 519 8.830201 ACGACATATACGAGTAATAGAAGAGT 57.170 34.615 8.17 0.00 34.70 3.24
520 521 9.920133 ACTACGACATATACGAGTAATAGAAGA 57.080 33.333 8.17 0.00 34.70 2.87
521 522 9.955310 CACTACGACATATACGAGTAATAGAAG 57.045 37.037 8.17 0.00 34.70 2.85
522 523 8.929746 CCACTACGACATATACGAGTAATAGAA 58.070 37.037 8.17 0.00 34.70 2.10
523 524 7.063898 GCCACTACGACATATACGAGTAATAGA 59.936 40.741 8.17 0.00 34.70 1.98
524 525 7.148523 TGCCACTACGACATATACGAGTAATAG 60.149 40.741 8.17 2.94 34.70 1.73
525 526 6.650390 TGCCACTACGACATATACGAGTAATA 59.350 38.462 8.17 0.00 34.70 0.98
526 527 5.471116 TGCCACTACGACATATACGAGTAAT 59.529 40.000 8.17 0.00 34.70 1.89
527 528 4.815846 TGCCACTACGACATATACGAGTAA 59.184 41.667 8.17 0.00 34.70 2.24
528 529 4.379652 TGCCACTACGACATATACGAGTA 58.620 43.478 8.17 0.00 34.70 2.59
529 530 3.208594 TGCCACTACGACATATACGAGT 58.791 45.455 8.17 5.22 34.70 4.18
530 531 3.891056 TGCCACTACGACATATACGAG 57.109 47.619 8.17 4.74 34.70 4.18
531 532 4.841443 ATTGCCACTACGACATATACGA 57.159 40.909 8.17 0.00 34.70 3.43
532 533 5.567915 CACTATTGCCACTACGACATATACG 59.432 44.000 0.00 0.00 0.00 3.06
533 534 6.444633 ACACTATTGCCACTACGACATATAC 58.555 40.000 0.00 0.00 0.00 1.47
534 535 6.644248 ACACTATTGCCACTACGACATATA 57.356 37.500 0.00 0.00 0.00 0.86
535 536 5.531122 ACACTATTGCCACTACGACATAT 57.469 39.130 0.00 0.00 0.00 1.78
536 537 4.994907 ACACTATTGCCACTACGACATA 57.005 40.909 0.00 0.00 0.00 2.29
537 538 3.887621 ACACTATTGCCACTACGACAT 57.112 42.857 0.00 0.00 0.00 3.06
538 539 3.671008 AACACTATTGCCACTACGACA 57.329 42.857 0.00 0.00 0.00 4.35
539 540 4.741342 ACTAACACTATTGCCACTACGAC 58.259 43.478 0.00 0.00 0.00 4.34
540 541 4.460034 TGACTAACACTATTGCCACTACGA 59.540 41.667 0.00 0.00 0.00 3.43
541 542 4.740268 TGACTAACACTATTGCCACTACG 58.260 43.478 0.00 0.00 0.00 3.51
542 543 6.258068 GGAATGACTAACACTATTGCCACTAC 59.742 42.308 0.00 0.00 0.00 2.73
543 544 6.070481 TGGAATGACTAACACTATTGCCACTA 60.070 38.462 0.00 0.00 0.00 2.74
544 545 5.186198 GGAATGACTAACACTATTGCCACT 58.814 41.667 0.00 0.00 0.00 4.00
545 546 4.941263 TGGAATGACTAACACTATTGCCAC 59.059 41.667 0.00 0.00 0.00 5.01
546 547 5.172687 TGGAATGACTAACACTATTGCCA 57.827 39.130 0.00 0.00 0.00 4.92
562 563 3.405823 ACCAAAGTTTGCCATGGAATG 57.594 42.857 18.40 0.00 46.21 2.67
563 564 3.515104 CCTACCAAAGTTTGCCATGGAAT 59.485 43.478 18.40 0.00 36.75 3.01
564 565 2.896685 CCTACCAAAGTTTGCCATGGAA 59.103 45.455 18.40 0.00 36.75 3.53
565 566 2.524306 CCTACCAAAGTTTGCCATGGA 58.476 47.619 18.40 0.00 36.75 3.41
566 567 1.550072 CCCTACCAAAGTTTGCCATGG 59.450 52.381 7.63 7.63 38.91 3.66
567 568 1.066929 GCCCTACCAAAGTTTGCCATG 60.067 52.381 10.25 0.00 0.00 3.66
568 569 1.203174 AGCCCTACCAAAGTTTGCCAT 60.203 47.619 10.25 0.73 0.00 4.40
569 570 0.187361 AGCCCTACCAAAGTTTGCCA 59.813 50.000 10.25 0.00 0.00 4.92
570 571 2.209690 TAGCCCTACCAAAGTTTGCC 57.790 50.000 10.25 0.00 0.00 4.52
571 572 3.119137 CCATTAGCCCTACCAAAGTTTGC 60.119 47.826 10.25 0.00 0.00 3.68
572 573 4.086457 ACCATTAGCCCTACCAAAGTTTG 58.914 43.478 8.73 8.73 0.00 2.93
573 574 4.341487 GACCATTAGCCCTACCAAAGTTT 58.659 43.478 0.00 0.00 0.00 2.66
574 575 3.621461 CGACCATTAGCCCTACCAAAGTT 60.621 47.826 0.00 0.00 0.00 2.66
575 576 2.093128 CGACCATTAGCCCTACCAAAGT 60.093 50.000 0.00 0.00 0.00 2.66
576 577 2.169769 TCGACCATTAGCCCTACCAAAG 59.830 50.000 0.00 0.00 0.00 2.77
577 578 2.189676 TCGACCATTAGCCCTACCAAA 58.810 47.619 0.00 0.00 0.00 3.28
578 579 1.868713 TCGACCATTAGCCCTACCAA 58.131 50.000 0.00 0.00 0.00 3.67
579 580 1.483415 GTTCGACCATTAGCCCTACCA 59.517 52.381 0.00 0.00 0.00 3.25
580 581 1.761198 AGTTCGACCATTAGCCCTACC 59.239 52.381 0.00 0.00 0.00 3.18
581 582 4.557205 CATAGTTCGACCATTAGCCCTAC 58.443 47.826 0.00 0.00 0.00 3.18
582 583 3.576982 CCATAGTTCGACCATTAGCCCTA 59.423 47.826 0.00 0.00 0.00 3.53
583 584 2.368875 CCATAGTTCGACCATTAGCCCT 59.631 50.000 0.00 0.00 0.00 5.19
584 585 2.550208 CCCATAGTTCGACCATTAGCCC 60.550 54.545 0.00 0.00 0.00 5.19
585 586 2.104281 ACCCATAGTTCGACCATTAGCC 59.896 50.000 0.00 0.00 0.00 3.93
586 587 3.470645 ACCCATAGTTCGACCATTAGC 57.529 47.619 0.00 0.00 0.00 3.09
587 588 4.127171 CCAACCCATAGTTCGACCATTAG 58.873 47.826 0.00 0.00 36.18 1.73
588 589 3.683281 GCCAACCCATAGTTCGACCATTA 60.683 47.826 0.00 0.00 36.18 1.90
589 590 2.944094 GCCAACCCATAGTTCGACCATT 60.944 50.000 0.00 0.00 36.18 3.16
590 591 1.408266 GCCAACCCATAGTTCGACCAT 60.408 52.381 0.00 0.00 36.18 3.55
591 592 0.035820 GCCAACCCATAGTTCGACCA 60.036 55.000 0.00 0.00 36.18 4.02
592 593 0.252197 AGCCAACCCATAGTTCGACC 59.748 55.000 0.00 0.00 36.18 4.79
593 594 2.483188 CCTAGCCAACCCATAGTTCGAC 60.483 54.545 0.00 0.00 36.18 4.20
594 595 1.760613 CCTAGCCAACCCATAGTTCGA 59.239 52.381 0.00 0.00 36.18 3.71
595 596 1.202651 CCCTAGCCAACCCATAGTTCG 60.203 57.143 0.00 0.00 36.18 3.95
596 597 1.844497 ACCCTAGCCAACCCATAGTTC 59.156 52.381 0.00 0.00 36.18 3.01
597 598 1.844497 GACCCTAGCCAACCCATAGTT 59.156 52.381 0.00 0.00 40.16 2.24
598 599 1.508256 GACCCTAGCCAACCCATAGT 58.492 55.000 0.00 0.00 0.00 2.12
599 600 0.765510 GGACCCTAGCCAACCCATAG 59.234 60.000 0.00 0.00 0.00 2.23
600 601 1.052124 CGGACCCTAGCCAACCCATA 61.052 60.000 0.00 0.00 0.00 2.74
601 602 2.375345 CGGACCCTAGCCAACCCAT 61.375 63.158 0.00 0.00 0.00 4.00
602 603 3.006728 CGGACCCTAGCCAACCCA 61.007 66.667 0.00 0.00 0.00 4.51
603 604 3.793888 CCGGACCCTAGCCAACCC 61.794 72.222 0.00 0.00 0.00 4.11
604 605 4.484872 GCCGGACCCTAGCCAACC 62.485 72.222 5.05 0.00 0.00 3.77
605 606 3.387225 GAGCCGGACCCTAGCCAAC 62.387 68.421 5.05 0.00 0.00 3.77
606 607 3.081409 GAGCCGGACCCTAGCCAA 61.081 66.667 5.05 0.00 0.00 4.52
607 608 4.075793 AGAGCCGGACCCTAGCCA 62.076 66.667 5.05 0.00 0.00 4.75
608 609 3.541713 CAGAGCCGGACCCTAGCC 61.542 72.222 5.05 0.00 0.00 3.93
609 610 2.359967 AACAGAGCCGGACCCTAGC 61.360 63.158 5.05 0.00 0.00 3.42
610 611 1.517832 CAACAGAGCCGGACCCTAG 59.482 63.158 5.05 0.00 0.00 3.02
611 612 2.656069 GCAACAGAGCCGGACCCTA 61.656 63.158 5.05 0.00 0.00 3.53
612 613 4.021925 GCAACAGAGCCGGACCCT 62.022 66.667 5.05 0.00 0.00 4.34
613 614 3.959991 GAGCAACAGAGCCGGACCC 62.960 68.421 5.05 0.00 34.23 4.46
614 615 1.605058 TAGAGCAACAGAGCCGGACC 61.605 60.000 5.05 0.00 34.23 4.46
615 616 0.458716 GTAGAGCAACAGAGCCGGAC 60.459 60.000 5.05 0.00 34.23 4.79
616 617 1.890894 GTAGAGCAACAGAGCCGGA 59.109 57.895 5.05 0.00 34.23 5.14
617 618 1.517257 CGTAGAGCAACAGAGCCGG 60.517 63.158 0.00 0.00 34.23 6.13
618 619 1.506718 TCGTAGAGCAACAGAGCCG 59.493 57.895 0.00 0.00 34.23 5.52
680 681 6.072119 ACTGGTTGAGACGAGTTTTTCTTTTT 60.072 34.615 0.00 0.00 41.35 1.94
681 682 5.414765 ACTGGTTGAGACGAGTTTTTCTTTT 59.585 36.000 0.00 0.00 41.35 2.27
682 683 4.941873 ACTGGTTGAGACGAGTTTTTCTTT 59.058 37.500 0.00 0.00 41.35 2.52
683 684 4.514401 ACTGGTTGAGACGAGTTTTTCTT 58.486 39.130 0.00 0.00 41.35 2.52
684 685 4.138487 ACTGGTTGAGACGAGTTTTTCT 57.862 40.909 0.00 0.00 41.35 2.52
690 691 1.760613 TGGAAACTGGTTGAGACGAGT 59.239 47.619 0.00 0.00 45.31 4.18
691 692 2.526304 TGGAAACTGGTTGAGACGAG 57.474 50.000 0.00 0.00 37.60 4.18
692 693 2.432874 TCTTGGAAACTGGTTGAGACGA 59.567 45.455 0.00 0.00 0.00 4.20
693 694 2.833794 TCTTGGAAACTGGTTGAGACG 58.166 47.619 0.00 0.00 0.00 4.18
694 695 5.576447 TTTTCTTGGAAACTGGTTGAGAC 57.424 39.130 0.00 0.00 0.00 3.36
714 715 7.333423 TCGATCGAATCCAGTTATTCTGTTTTT 59.667 33.333 16.99 0.00 42.19 1.94
715 716 6.816640 TCGATCGAATCCAGTTATTCTGTTTT 59.183 34.615 16.99 0.00 42.19 2.43
716 717 6.338146 TCGATCGAATCCAGTTATTCTGTTT 58.662 36.000 16.99 0.00 42.19 2.83
717 718 5.902681 TCGATCGAATCCAGTTATTCTGTT 58.097 37.500 16.99 0.00 42.19 3.16
718 719 5.067936 ACTCGATCGAATCCAGTTATTCTGT 59.932 40.000 19.92 5.20 42.19 3.41
719 720 5.524284 ACTCGATCGAATCCAGTTATTCTG 58.476 41.667 19.92 4.54 43.27 3.02
720 721 5.278561 GGACTCGATCGAATCCAGTTATTCT 60.279 44.000 34.11 0.64 40.00 2.40
721 722 4.918583 GGACTCGATCGAATCCAGTTATTC 59.081 45.833 34.11 9.66 40.00 1.75
724 725 3.552875 AGGACTCGATCGAATCCAGTTA 58.447 45.455 38.12 7.71 42.43 2.24
729 730 5.157781 CAAGATAAGGACTCGATCGAATCC 58.842 45.833 32.66 32.66 40.50 3.01
817 823 7.436430 AGAGCATCGACTACTTAATTATCGA 57.564 36.000 9.77 9.77 45.01 3.59
981 4115 5.009631 TGCATCTTGTTGTTAACTATGGCT 58.990 37.500 7.22 0.00 0.00 4.75
984 4118 7.485913 GTGGAATGCATCTTGTTGTTAACTATG 59.514 37.037 7.22 2.99 0.00 2.23
1163 4300 1.633915 ATCTCCTCTGGCCAGCAAGG 61.634 60.000 27.54 27.54 41.84 3.61
1428 4567 1.610673 GAGGAGGAGGCCACAGACA 60.611 63.158 5.01 0.00 0.00 3.41
1590 4729 1.191096 CTGCAACAAACGAAGCACAC 58.809 50.000 0.00 0.00 32.87 3.82
1592 4731 0.380378 TCCTGCAACAAACGAAGCAC 59.620 50.000 0.00 0.00 32.87 4.40
1599 4738 1.003866 GTGACGACTCCTGCAACAAAC 60.004 52.381 0.00 0.00 0.00 2.93
1604 4743 0.032130 GACAGTGACGACTCCTGCAA 59.968 55.000 0.00 0.00 0.00 4.08
1620 4759 9.344772 TCAAAGTTATTAAAGGTAAGCAAGACA 57.655 29.630 0.00 0.00 0.00 3.41
1641 4780 0.599558 CCACAGCCACACCATCAAAG 59.400 55.000 0.00 0.00 0.00 2.77
1647 4786 2.429930 GTAGCCACAGCCACACCA 59.570 61.111 0.00 0.00 41.25 4.17
1656 4795 0.708209 TGTCTAGGGAGGTAGCCACA 59.292 55.000 0.00 0.00 0.00 4.17
1676 4815 1.913778 ACTGAGCATTGTCCATTGCA 58.086 45.000 14.45 0.00 39.42 4.08
1686 4825 1.188863 GGCATTCCCAACTGAGCATT 58.811 50.000 0.00 0.00 0.00 3.56
1709 4848 0.601576 TGAAACCGGATGTGACCACG 60.602 55.000 9.46 0.00 0.00 4.94
1717 4856 1.063469 GCCGTGTAATGAAACCGGATG 59.937 52.381 9.46 0.00 41.08 3.51
1761 4900 2.007049 GCACCCGTCACATCGATTTCT 61.007 52.381 0.00 0.00 0.00 2.52
1763 4902 0.321210 TGCACCCGTCACATCGATTT 60.321 50.000 0.00 0.00 0.00 2.17
1776 4915 1.543802 TCGAAAATCATTGGTGCACCC 59.456 47.619 32.62 15.42 34.29 4.61
1798 4943 2.809601 GTGGTACGCTGCGTCCAG 60.810 66.667 31.72 8.02 41.54 3.86
1806 4951 2.494918 GCTCGATGGTGGTACGCT 59.505 61.111 0.00 0.00 39.78 5.07
1809 4954 0.739813 GTGTGGCTCGATGGTGGTAC 60.740 60.000 0.00 0.00 0.00 3.34
1833 4984 0.394762 TGGGGCATGTGAAGATCAGC 60.395 55.000 0.00 0.00 0.00 4.26
1851 5002 1.333619 GAGTAGAGGCGCTTCTCTCTG 59.666 57.143 26.60 0.00 42.57 3.35
1852 5003 1.675552 GAGTAGAGGCGCTTCTCTCT 58.324 55.000 26.60 23.12 42.57 3.10
1853 5004 0.306533 CGAGTAGAGGCGCTTCTCTC 59.693 60.000 26.60 25.73 42.57 3.20
1860 5011 0.386226 GATAGCACGAGTAGAGGCGC 60.386 60.000 0.00 0.00 0.00 6.53
1912 5066 0.249120 AGGAAATCGTCGTCATGGCA 59.751 50.000 0.00 0.00 0.00 4.92
1959 5115 6.238759 GGATAAATTTCCCCAAGACAAGATCG 60.239 42.308 0.00 0.00 0.00 3.69
1974 5130 6.292703 CGATGTCTGTTACCGGGATAAATTTC 60.293 42.308 6.32 0.00 0.00 2.17
1987 5143 4.989168 AGTGTTTTCTCCGATGTCTGTTAC 59.011 41.667 0.00 0.00 0.00 2.50
1995 5151 7.095060 CCCATGAATATAGTGTTTTCTCCGATG 60.095 40.741 0.00 0.00 0.00 3.84
2007 5163 9.745018 ATATTCCTTTGTCCCATGAATATAGTG 57.255 33.333 0.00 0.00 37.04 2.74
2010 5166 9.964354 CAGATATTCCTTTGTCCCATGAATATA 57.036 33.333 0.00 0.00 38.23 0.86
2013 5169 6.548622 CACAGATATTCCTTTGTCCCATGAAT 59.451 38.462 0.00 0.00 0.00 2.57
2034 5190 4.096984 GGAAATGCCTTGGAAGATACACAG 59.903 45.833 0.00 0.00 0.00 3.66
2065 5221 6.569994 CGGTAGTAGACAATAGTATTGGCCTC 60.570 46.154 22.67 16.14 0.00 4.70
2085 5241 1.533338 CGGTTCTTGATCGGACGGTAG 60.533 57.143 0.00 0.00 0.00 3.18
2095 5251 2.687935 ACTGTGCAAAACGGTTCTTGAT 59.312 40.909 15.26 0.00 46.79 2.57
2101 5257 1.752683 TGGTACTGTGCAAAACGGTT 58.247 45.000 0.00 0.00 46.79 4.44
2104 5260 4.391830 ACTGATATGGTACTGTGCAAAACG 59.608 41.667 0.00 0.00 0.00 3.60
2115 5271 3.069158 AGGTGCGGTTACTGATATGGTAC 59.931 47.826 0.00 0.00 0.00 3.34
2119 5275 2.158957 ACCAGGTGCGGTTACTGATATG 60.159 50.000 0.00 0.00 34.91 1.78
2121 5277 1.479323 GACCAGGTGCGGTTACTGATA 59.521 52.381 0.00 0.00 40.22 2.15
2125 5281 1.370064 GTGACCAGGTGCGGTTACT 59.630 57.895 0.00 0.00 41.22 2.24
2132 5288 2.813226 TAATGCCCGTGACCAGGTGC 62.813 60.000 0.00 0.00 0.00 5.01
2145 5301 0.952984 GGCTGCTCCGATCTAATGCC 60.953 60.000 0.00 0.00 0.00 4.40
2149 5305 3.244215 CCATTTAGGCTGCTCCGATCTAA 60.244 47.826 0.00 0.00 40.77 2.10
2151 5307 1.071385 CCATTTAGGCTGCTCCGATCT 59.929 52.381 0.00 0.00 40.77 2.75
2164 5320 0.171007 CCTTGTGCACGGCCATTTAG 59.829 55.000 13.13 0.00 0.00 1.85
2165 5321 1.872197 GCCTTGTGCACGGCCATTTA 61.872 55.000 21.37 0.00 39.58 1.40
2195 5351 7.440556 AGCAGCAAGTTAAGATATGACACATAG 59.559 37.037 0.00 0.00 0.00 2.23
2199 5355 5.814705 AGAGCAGCAAGTTAAGATATGACAC 59.185 40.000 0.00 0.00 0.00 3.67
2206 5362 2.419297 CGGGAGAGCAGCAAGTTAAGAT 60.419 50.000 0.00 0.00 0.00 2.40
2220 5376 1.883084 GTACCAATGCGCGGGAGAG 60.883 63.158 18.00 0.23 0.00 3.20
2222 5378 2.616786 TACGTACCAATGCGCGGGAG 62.617 60.000 18.00 11.17 37.46 4.30
2249 5408 3.683365 ATCATGCACCAAAAGAAACCC 57.317 42.857 0.00 0.00 0.00 4.11
2250 5409 6.476706 GCTATTATCATGCACCAAAAGAAACC 59.523 38.462 0.00 0.00 0.00 3.27
2255 5414 5.750067 GGTTGCTATTATCATGCACCAAAAG 59.250 40.000 0.00 0.00 36.37 2.27
2261 5420 7.596494 ACAATATGGTTGCTATTATCATGCAC 58.404 34.615 0.00 0.00 36.37 4.57
2324 5483 4.415881 TGTTCCTACAAGCACAGAGAAA 57.584 40.909 0.00 0.00 0.00 2.52
2329 5488 3.251004 GTCCTTTGTTCCTACAAGCACAG 59.749 47.826 0.00 0.00 44.56 3.66
2339 5498 5.098663 TGGGTAATCTAGTCCTTTGTTCCT 58.901 41.667 0.00 0.00 0.00 3.36
2351 5510 6.732896 ACAACCTGTAGATGGGTAATCTAG 57.267 41.667 0.00 0.00 46.40 2.43
2368 5527 1.887198 CACTCTGGTCGTCTACAACCT 59.113 52.381 0.00 0.00 36.47 3.50
2383 5542 2.370189 CTCTTGTTTCACCTCCCACTCT 59.630 50.000 0.00 0.00 0.00 3.24
2411 5570 1.695242 TGATGACGTTTGTACCCCAGT 59.305 47.619 0.00 0.00 0.00 4.00
2422 5581 9.823647 ATCAAGTAGAATAAGATTGATGACGTT 57.176 29.630 0.00 0.00 38.74 3.99


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.