Multiple sequence alignment - TraesCS4D01G026700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G026700 chr4D 100.000 8581 0 0 1 8581 11854340 11862920 0.000000e+00 15847.0
1 TraesCS4D01G026700 chr4D 100.000 33 0 0 7025 7057 13372893 13372861 2.590000e-05 62.1
2 TraesCS4D01G026700 chr4D 100.000 33 0 0 7025 7057 456266824 456266856 2.590000e-05 62.1
3 TraesCS4D01G026700 chr4D 89.796 49 2 1 6423 6471 243768517 243768472 9.300000e-05 60.2
4 TraesCS4D01G026700 chr4A 96.583 4829 119 20 1077 5887 590667725 590662925 0.000000e+00 7962.0
5 TraesCS4D01G026700 chr4A 96.676 1113 32 4 5922 7032 590662928 590661819 0.000000e+00 1845.0
6 TraesCS4D01G026700 chr4A 90.119 1093 57 22 7198 8282 590661525 590660476 0.000000e+00 1373.0
7 TraesCS4D01G026700 chr4A 87.525 505 27 15 528 1021 590668386 590667907 1.260000e-152 551.0
8 TraesCS4D01G026700 chr4A 87.870 338 15 13 8261 8581 590660543 590660215 2.920000e-99 374.0
9 TraesCS4D01G026700 chr4A 97.143 175 5 0 7025 7199 590661785 590661611 6.510000e-76 296.0
10 TraesCS4D01G026700 chr4A 82.331 266 22 9 4161 4413 67175040 67175293 3.140000e-49 207.0
11 TraesCS4D01G026700 chr4A 80.214 187 28 9 6317 6498 329187159 329186977 1.940000e-26 132.0
12 TraesCS4D01G026700 chr4B 94.876 2791 70 16 1957 4728 21943228 21940492 0.000000e+00 4294.0
13 TraesCS4D01G026700 chr4B 95.618 2145 71 10 4763 6891 21939901 21937764 0.000000e+00 3419.0
14 TraesCS4D01G026700 chr4B 92.832 865 52 5 1080 1940 21944075 21943217 0.000000e+00 1245.0
15 TraesCS4D01G026700 chr4B 91.591 773 49 11 7270 8036 21937756 21936994 0.000000e+00 1053.0
16 TraesCS4D01G026700 chr4B 90.748 508 23 9 8084 8581 21936989 21936496 0.000000e+00 656.0
17 TraesCS4D01G026700 chr4B 87.879 330 19 12 528 857 21944699 21944391 1.360000e-97 368.0
18 TraesCS4D01G026700 chr4B 82.877 292 30 10 4134 4413 472392663 472392946 2.390000e-60 244.0
19 TraesCS4D01G026700 chr4B 88.095 84 10 0 26 109 323780195 323780112 5.480000e-17 100.0
20 TraesCS4D01G026700 chr4B 79.545 132 25 2 4891 5021 95681489 95681619 9.170000e-15 93.5
21 TraesCS4D01G026700 chr5A 86.369 895 84 23 4142 5003 39733306 39734195 0.000000e+00 942.0
22 TraesCS4D01G026700 chr5A 95.122 41 2 0 6614 6654 706424420 706424380 2.000000e-06 65.8
23 TraesCS4D01G026700 chr5D 85.111 900 95 19 4142 5003 50319393 50320291 0.000000e+00 883.0
24 TraesCS4D01G026700 chr5D 78.472 144 20 10 6334 6470 472264835 472264974 5.520000e-12 84.2
25 TraesCS4D01G026700 chr5B 88.412 466 44 5 4142 4599 53020150 53020613 3.500000e-153 553.0
26 TraesCS4D01G026700 chr5B 81.188 404 46 15 4629 5003 53020594 53020996 1.810000e-76 298.0
27 TraesCS4D01G026700 chr5B 92.857 70 5 0 26 95 672808416 672808347 1.520000e-17 102.0
28 TraesCS4D01G026700 chr5B 78.947 133 24 4 4891 5021 259550600 259550730 4.270000e-13 87.9
29 TraesCS4D01G026700 chr6B 84.670 561 40 23 4134 4675 382771903 382771370 1.280000e-142 518.0
30 TraesCS4D01G026700 chr6B 88.043 92 8 3 4659 4747 382771356 382771265 1.180000e-18 106.0
31 TraesCS4D01G026700 chr6B 80.000 100 13 6 4869 4964 267021429 267021525 5.560000e-07 67.6
32 TraesCS4D01G026700 chr6B 90.476 42 1 2 6428 6469 261533423 261533385 1.600000e-02 52.8
33 TraesCS4D01G026700 chr6D 83.540 565 41 20 4134 4675 223941566 223942101 1.680000e-131 481.0
34 TraesCS4D01G026700 chr6D 94.203 69 4 0 4665 4733 223942123 223942191 1.180000e-18 106.0
35 TraesCS4D01G026700 chr6D 86.957 92 10 2 6604 6693 417896977 417896886 1.520000e-17 102.0
36 TraesCS4D01G026700 chr6D 85.938 64 7 2 49 111 6957427 6957489 5.560000e-07 67.6
37 TraesCS4D01G026700 chr6A 92.405 79 5 1 4655 4733 277279100 277279177 2.530000e-20 111.0
38 TraesCS4D01G026700 chr6A 87.879 66 6 2 6601 6664 18519871 18519806 9.240000e-10 76.8
39 TraesCS4D01G026700 chr7A 91.250 80 7 0 26 105 406442158 406442237 9.110000e-20 110.0
40 TraesCS4D01G026700 chr7A 79.545 132 25 2 4891 5021 53264103 53264233 9.170000e-15 93.5
41 TraesCS4D01G026700 chr2A 89.535 86 8 1 26 111 433481867 433481783 3.280000e-19 108.0
42 TraesCS4D01G026700 chr2A 86.364 88 10 2 26 112 83203610 83203696 2.550000e-15 95.3
43 TraesCS4D01G026700 chr2A 87.500 80 8 2 27 105 156360992 156361070 3.300000e-14 91.6
44 TraesCS4D01G026700 chr1D 77.368 190 28 9 6314 6498 339289361 339289540 1.970000e-16 99.0
45 TraesCS4D01G026700 chr1D 100.000 35 0 0 4398 4432 222339407 222339373 2.000000e-06 65.8
46 TraesCS4D01G026700 chr1A 87.805 82 4 1 1341 1416 588143240 588143159 3.300000e-14 91.6
47 TraesCS4D01G026700 chr1A 100.000 35 0 0 4398 4432 288513061 288513027 2.000000e-06 65.8
48 TraesCS4D01G026700 chr3B 91.803 61 5 0 51 111 91146626 91146566 1.530000e-12 86.1
49 TraesCS4D01G026700 chr3B 83.516 91 12 3 6605 6694 76488493 76488405 1.990000e-11 82.4
50 TraesCS4D01G026700 chr3B 91.111 45 2 1 6423 6467 746798807 746798849 9.300000e-05 60.2
51 TraesCS4D01G026700 chrUn 94.000 50 3 0 6605 6654 29907590 29907541 9.240000e-10 76.8
52 TraesCS4D01G026700 chr1B 94.000 50 3 0 6605 6654 588285170 588285219 9.240000e-10 76.8
53 TraesCS4D01G026700 chr1B 91.892 37 3 0 7031 7067 585543934 585543898 1.600000e-02 52.8
54 TraesCS4D01G026700 chr2B 82.558 86 14 1 26 111 397056386 397056302 3.320000e-09 75.0
55 TraesCS4D01G026700 chr2B 82.667 75 12 1 4891 4964 247931985 247932059 2.000000e-06 65.8
56 TraesCS4D01G026700 chr7B 91.667 48 3 1 5497 5543 115682371 115682324 2.000000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G026700 chr4D 11854340 11862920 8580 False 15847.000000 15847 100.000000 1 8581 1 chr4D.!!$F1 8580
1 TraesCS4D01G026700 chr4A 590660215 590668386 8171 True 2066.833333 7962 92.652667 528 8581 6 chr4A.!!$R2 8053
2 TraesCS4D01G026700 chr4B 21936496 21944699 8203 True 1839.166667 4294 92.257333 528 8581 6 chr4B.!!$R2 8053
3 TraesCS4D01G026700 chr5A 39733306 39734195 889 False 942.000000 942 86.369000 4142 5003 1 chr5A.!!$F1 861
4 TraesCS4D01G026700 chr5D 50319393 50320291 898 False 883.000000 883 85.111000 4142 5003 1 chr5D.!!$F1 861
5 TraesCS4D01G026700 chr5B 53020150 53020996 846 False 425.500000 553 84.800000 4142 5003 2 chr5B.!!$F2 861
6 TraesCS4D01G026700 chr6B 382771265 382771903 638 True 312.000000 518 86.356500 4134 4747 2 chr6B.!!$R2 613
7 TraesCS4D01G026700 chr6D 223941566 223942191 625 False 293.500000 481 88.871500 4134 4733 2 chr6D.!!$F2 599

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
871 878 0.034960 TGACGAGCTGGCTCTACTCT 60.035 55.000 18.57 0.00 40.69 3.24 F
1281 1430 1.000486 CCAGGAGGAGGTCGAGGAA 60.000 63.158 0.00 0.00 36.89 3.36 F
2549 2704 0.258774 TCCTTCCAAGCTAATGGCCC 59.741 55.000 0.00 0.00 43.05 5.80 F
2581 2736 9.109393 TGTTAAATCTCTTACAATACATGGAGC 57.891 33.333 0.00 0.00 0.00 4.70 F
3376 3534 1.001378 CCTTTGAGCAGAAAACCACCG 60.001 52.381 0.00 0.00 0.00 4.94 F
3821 3986 1.447217 CCTGCATCATACCCTCGCA 59.553 57.895 0.00 0.00 0.00 5.10 F
4714 4944 2.159819 ATCTGCTCGAGCGTGGTTGT 62.160 55.000 30.75 10.68 45.83 3.32 F
5626 6420 1.004277 GCCAAGTAAGTCCATGTCCCA 59.996 52.381 0.00 0.00 0.00 4.37 F
6164 6970 2.671396 GTGATGACACGTGTCCATAACC 59.329 50.000 38.12 22.69 44.15 2.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1894 2046 0.651610 CGCGGAGAATCGAAAATGCG 60.652 55.000 0.00 0.0 38.28 4.73 R
2606 2761 2.298610 GGGGCAACTATTAACAGAGGC 58.701 52.381 0.00 0.0 0.00 4.70 R
3376 3534 0.531974 TGTCCAGGTCAGCACGTTTC 60.532 55.000 0.00 0.0 0.00 2.78 R
4011 4176 3.120121 GCGAAATCACAACATTGCAAGAC 59.880 43.478 4.94 0.0 0.00 3.01 R
5261 6055 1.486310 TCCCAATCATCAGAGAACCCG 59.514 52.381 0.00 0.0 0.00 5.28 R
5617 6411 2.431954 AGCAGAGAATTGGGACATGG 57.568 50.000 0.00 0.0 39.30 3.66 R
5932 6737 3.726837 ACCCCCTCTGTAATATGGACT 57.273 47.619 0.00 0.0 0.00 3.85 R
6931 7738 1.202268 GCTGGCTGATCTGAATTGTGC 60.202 52.381 3.42 0.0 0.00 4.57 R
7715 8656 0.108186 CCAAGTCATGCGTGGCTCTA 60.108 55.000 14.59 0.0 40.00 2.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.550830 CGGGGGATTACCATCTTGAG 57.449 55.000 0.00 0.00 42.91 3.02
20 21 1.768870 CGGGGGATTACCATCTTGAGT 59.231 52.381 0.00 0.00 42.91 3.41
21 22 2.969950 CGGGGGATTACCATCTTGAGTA 59.030 50.000 0.00 0.00 42.91 2.59
22 23 3.244112 CGGGGGATTACCATCTTGAGTAC 60.244 52.174 0.00 0.00 42.91 2.73
23 24 3.244112 GGGGGATTACCATCTTGAGTACG 60.244 52.174 0.00 0.00 42.91 3.67
24 25 3.640029 GGGGATTACCATCTTGAGTACGA 59.360 47.826 0.00 0.00 42.91 3.43
25 26 4.501058 GGGGATTACCATCTTGAGTACGAC 60.501 50.000 0.00 0.00 42.91 4.34
26 27 4.098960 GGGATTACCATCTTGAGTACGACA 59.901 45.833 0.00 0.00 39.85 4.35
27 28 5.221461 GGGATTACCATCTTGAGTACGACAT 60.221 44.000 0.00 0.00 39.85 3.06
28 29 6.281405 GGATTACCATCTTGAGTACGACATT 58.719 40.000 0.00 0.00 35.97 2.71
29 30 6.421202 GGATTACCATCTTGAGTACGACATTC 59.579 42.308 0.00 0.00 35.97 2.67
30 31 6.525578 TTACCATCTTGAGTACGACATTCT 57.474 37.500 0.00 0.00 0.00 2.40
31 32 5.407407 ACCATCTTGAGTACGACATTCTT 57.593 39.130 0.00 0.00 0.00 2.52
32 33 5.411781 ACCATCTTGAGTACGACATTCTTC 58.588 41.667 0.00 0.00 0.00 2.87
33 34 5.047306 ACCATCTTGAGTACGACATTCTTCA 60.047 40.000 0.00 0.00 0.00 3.02
34 35 5.518128 CCATCTTGAGTACGACATTCTTCAG 59.482 44.000 0.00 0.00 0.00 3.02
35 36 5.707242 TCTTGAGTACGACATTCTTCAGT 57.293 39.130 0.00 0.00 0.00 3.41
36 37 6.085555 TCTTGAGTACGACATTCTTCAGTT 57.914 37.500 0.00 0.00 0.00 3.16
37 38 5.920840 TCTTGAGTACGACATTCTTCAGTTG 59.079 40.000 0.00 0.00 0.00 3.16
38 39 5.196341 TGAGTACGACATTCTTCAGTTGT 57.804 39.130 0.00 0.00 36.40 3.32
39 40 5.597806 TGAGTACGACATTCTTCAGTTGTT 58.402 37.500 0.00 0.00 34.37 2.83
40 41 5.462068 TGAGTACGACATTCTTCAGTTGTTG 59.538 40.000 0.00 0.00 34.37 3.33
41 42 4.750098 AGTACGACATTCTTCAGTTGTTGG 59.250 41.667 0.00 0.00 34.37 3.77
42 43 3.541632 ACGACATTCTTCAGTTGTTGGT 58.458 40.909 0.00 0.00 0.00 3.67
43 44 4.699637 ACGACATTCTTCAGTTGTTGGTA 58.300 39.130 0.00 0.00 0.00 3.25
44 45 4.750098 ACGACATTCTTCAGTTGTTGGTAG 59.250 41.667 0.00 0.00 0.00 3.18
45 46 4.152402 CGACATTCTTCAGTTGTTGGTAGG 59.848 45.833 0.00 0.00 0.00 3.18
46 47 5.048846 ACATTCTTCAGTTGTTGGTAGGT 57.951 39.130 0.00 0.00 0.00 3.08
47 48 5.063880 ACATTCTTCAGTTGTTGGTAGGTC 58.936 41.667 0.00 0.00 0.00 3.85
48 49 3.764237 TCTTCAGTTGTTGGTAGGTCC 57.236 47.619 0.00 0.00 0.00 4.46
49 50 3.314693 TCTTCAGTTGTTGGTAGGTCCT 58.685 45.455 0.00 0.00 37.07 3.85
50 51 3.323979 TCTTCAGTTGTTGGTAGGTCCTC 59.676 47.826 0.00 0.00 37.07 3.71
51 52 1.616865 TCAGTTGTTGGTAGGTCCTCG 59.383 52.381 0.00 0.00 37.07 4.63
52 53 0.974383 AGTTGTTGGTAGGTCCTCGG 59.026 55.000 0.00 0.00 37.07 4.63
53 54 0.672711 GTTGTTGGTAGGTCCTCGGC 60.673 60.000 0.00 0.00 37.07 5.54
54 55 1.833787 TTGTTGGTAGGTCCTCGGCC 61.834 60.000 0.00 0.00 37.07 6.13
55 56 2.686106 TTGGTAGGTCCTCGGCCC 60.686 66.667 0.00 0.00 37.07 5.80
57 58 4.828296 GGTAGGTCCTCGGCCCGA 62.828 72.222 5.37 5.37 0.00 5.14
58 59 3.525545 GTAGGTCCTCGGCCCGAC 61.526 72.222 0.00 0.00 0.00 4.79
65 66 3.781307 CTCGGCCCGACCCATGAA 61.781 66.667 0.00 0.00 33.26 2.57
66 67 3.087253 TCGGCCCGACCCATGAAT 61.087 61.111 0.00 0.00 33.26 2.57
67 68 2.901840 CGGCCCGACCCATGAATG 60.902 66.667 0.00 0.00 33.26 2.67
69 70 3.219198 GCCCGACCCATGAATGGC 61.219 66.667 3.62 0.00 46.70 4.40
70 71 2.901840 CCCGACCCATGAATGGCG 60.902 66.667 3.62 3.40 46.70 5.69
71 72 2.901840 CCGACCCATGAATGGCGG 60.902 66.667 12.18 12.18 46.70 6.13
72 73 2.901840 CGACCCATGAATGGCGGG 60.902 66.667 3.62 0.00 46.70 6.13
73 74 3.219198 GACCCATGAATGGCGGGC 61.219 66.667 3.62 0.00 46.70 6.13
74 75 4.839706 ACCCATGAATGGCGGGCC 62.840 66.667 1.86 1.86 46.70 5.80
76 77 4.873810 CCATGAATGGCGGGCCGA 62.874 66.667 33.44 10.70 41.75 5.54
77 78 3.585990 CATGAATGGCGGGCCGAC 61.586 66.667 33.44 31.09 39.42 4.79
97 98 4.657952 GGTGTGCACCCCCTAATC 57.342 61.111 15.69 0.00 45.68 1.75
98 99 1.076995 GGTGTGCACCCCCTAATCC 60.077 63.158 15.69 0.49 45.68 3.01
99 100 1.688811 GTGTGCACCCCCTAATCCA 59.311 57.895 15.69 0.00 0.00 3.41
100 101 0.394352 GTGTGCACCCCCTAATCCAG 60.394 60.000 15.69 0.00 0.00 3.86
101 102 1.227383 GTGCACCCCCTAATCCAGG 59.773 63.158 5.22 0.00 45.07 4.45
112 113 3.099267 CTAATCCAGGACATCGTCACC 57.901 52.381 0.00 0.00 33.68 4.02
113 114 0.541863 AATCCAGGACATCGTCACCC 59.458 55.000 0.00 0.00 33.68 4.61
114 115 1.676678 ATCCAGGACATCGTCACCCG 61.677 60.000 0.00 0.00 33.68 5.28
115 116 2.509336 CAGGACATCGTCACCCGC 60.509 66.667 0.00 0.00 33.68 6.13
116 117 3.771160 AGGACATCGTCACCCGCC 61.771 66.667 0.00 0.00 33.68 6.13
118 119 4.124351 GACATCGTCACCCGCCGA 62.124 66.667 0.00 0.00 37.51 5.54
119 120 4.430765 ACATCGTCACCCGCCGAC 62.431 66.667 0.00 0.00 35.69 4.79
132 133 3.138798 CCGACCACCTCGACGGAT 61.139 66.667 3.98 0.00 46.14 4.18
133 134 2.408022 CGACCACCTCGACGGATC 59.592 66.667 7.76 0.00 46.14 3.36
134 135 2.806237 GACCACCTCGACGGATCC 59.194 66.667 0.00 0.00 36.31 3.36
135 136 2.758737 ACCACCTCGACGGATCCC 60.759 66.667 6.06 0.00 36.31 3.85
136 137 2.758327 CCACCTCGACGGATCCCA 60.758 66.667 6.06 0.00 36.31 4.37
137 138 2.355986 CCACCTCGACGGATCCCAA 61.356 63.158 6.06 0.00 36.31 4.12
138 139 1.153628 CACCTCGACGGATCCCAAC 60.154 63.158 6.06 0.00 36.31 3.77
139 140 1.608336 ACCTCGACGGATCCCAACA 60.608 57.895 6.06 0.00 36.31 3.33
140 141 1.189524 ACCTCGACGGATCCCAACAA 61.190 55.000 6.06 0.00 36.31 2.83
141 142 0.036765 CCTCGACGGATCCCAACAAA 60.037 55.000 6.06 0.00 33.16 2.83
142 143 1.359848 CTCGACGGATCCCAACAAAG 58.640 55.000 6.06 0.00 0.00 2.77
143 144 0.682852 TCGACGGATCCCAACAAAGT 59.317 50.000 6.06 0.00 0.00 2.66
144 145 1.076332 CGACGGATCCCAACAAAGTC 58.924 55.000 6.06 4.92 0.00 3.01
145 146 1.450025 GACGGATCCCAACAAAGTCC 58.550 55.000 6.06 0.00 0.00 3.85
146 147 2.466867 CGGATCCCAACAAAGTCCG 58.533 57.895 6.06 0.00 44.72 4.79
147 148 1.644786 CGGATCCCAACAAAGTCCGC 61.645 60.000 6.06 0.00 44.27 5.54
148 149 1.313091 GGATCCCAACAAAGTCCGCC 61.313 60.000 0.00 0.00 0.00 6.13
149 150 1.304134 ATCCCAACAAAGTCCGCCC 60.304 57.895 0.00 0.00 0.00 6.13
150 151 2.075355 ATCCCAACAAAGTCCGCCCA 62.075 55.000 0.00 0.00 0.00 5.36
151 152 2.561037 CCCAACAAAGTCCGCCCAC 61.561 63.158 0.00 0.00 0.00 4.61
152 153 1.528309 CCAACAAAGTCCGCCCACT 60.528 57.895 0.00 0.00 0.00 4.00
153 154 1.654220 CAACAAAGTCCGCCCACTG 59.346 57.895 0.00 0.00 0.00 3.66
154 155 0.817634 CAACAAAGTCCGCCCACTGA 60.818 55.000 0.00 0.00 0.00 3.41
155 156 0.535102 AACAAAGTCCGCCCACTGAG 60.535 55.000 0.00 0.00 0.00 3.35
156 157 1.672356 CAAAGTCCGCCCACTGAGG 60.672 63.158 0.00 0.00 34.75 3.86
157 158 1.841556 AAAGTCCGCCCACTGAGGA 60.842 57.895 0.00 0.00 41.10 3.71
160 161 4.316823 TCCGCCCACTGAGGACCT 62.317 66.667 0.00 0.00 38.11 3.85
161 162 3.775654 CCGCCCACTGAGGACCTC 61.776 72.222 15.13 15.13 41.22 3.85
162 163 4.135153 CGCCCACTGAGGACCTCG 62.135 72.222 16.81 13.32 41.22 4.63
163 164 2.680352 GCCCACTGAGGACCTCGA 60.680 66.667 16.81 5.36 41.22 4.04
164 165 2.060980 GCCCACTGAGGACCTCGAT 61.061 63.158 16.81 4.24 41.22 3.59
165 166 1.819229 CCCACTGAGGACCTCGATG 59.181 63.158 16.81 15.80 41.22 3.84
166 167 1.680522 CCCACTGAGGACCTCGATGG 61.681 65.000 26.70 26.70 41.22 3.51
167 168 1.680522 CCACTGAGGACCTCGATGGG 61.681 65.000 26.24 17.27 41.22 4.00
168 169 1.381872 ACTGAGGACCTCGATGGGG 60.382 63.158 16.81 5.21 41.11 4.96
169 170 1.075970 CTGAGGACCTCGATGGGGA 60.076 63.158 16.81 0.00 41.11 4.81
170 171 1.381327 TGAGGACCTCGATGGGGAC 60.381 63.158 16.81 0.00 41.11 4.46
171 172 2.163021 TGAGGACCTCGATGGGGACA 62.163 60.000 16.81 0.00 41.11 4.02
191 192 3.712881 GTCGGCGTTGCACACCTC 61.713 66.667 6.85 0.00 0.00 3.85
192 193 3.923864 TCGGCGTTGCACACCTCT 61.924 61.111 6.85 0.00 0.00 3.69
193 194 2.972505 CGGCGTTGCACACCTCTT 60.973 61.111 0.00 0.00 0.00 2.85
194 195 2.946762 GGCGTTGCACACCTCTTC 59.053 61.111 0.00 0.00 0.00 2.87
195 196 2.617274 GGCGTTGCACACCTCTTCC 61.617 63.158 0.00 0.00 0.00 3.46
196 197 2.617274 GCGTTGCACACCTCTTCCC 61.617 63.158 0.00 0.00 0.00 3.97
197 198 2.317609 CGTTGCACACCTCTTCCCG 61.318 63.158 0.00 0.00 0.00 5.14
198 199 2.281484 TTGCACACCTCTTCCCGC 60.281 61.111 0.00 0.00 0.00 6.13
199 200 4.680237 TGCACACCTCTTCCCGCG 62.680 66.667 0.00 0.00 0.00 6.46
203 204 4.821589 CACCTCTTCCCGCGCCTC 62.822 72.222 0.00 0.00 0.00 4.70
235 236 3.727146 CGGCCTTATACCGCCAAC 58.273 61.111 0.00 0.00 46.04 3.77
236 237 1.890510 CGGCCTTATACCGCCAACC 60.891 63.158 0.00 0.00 46.04 3.77
237 238 1.225148 GGCCTTATACCGCCAACCA 59.775 57.895 0.00 0.00 45.01 3.67
238 239 1.099295 GGCCTTATACCGCCAACCAC 61.099 60.000 0.00 0.00 45.01 4.16
239 240 1.099295 GCCTTATACCGCCAACCACC 61.099 60.000 0.00 0.00 0.00 4.61
240 241 0.544697 CCTTATACCGCCAACCACCT 59.455 55.000 0.00 0.00 0.00 4.00
241 242 1.663695 CTTATACCGCCAACCACCTG 58.336 55.000 0.00 0.00 0.00 4.00
242 243 0.253610 TTATACCGCCAACCACCTGG 59.746 55.000 0.00 0.00 39.71 4.45
252 253 4.722700 CCACCTGGTGCGGAAGGG 62.723 72.222 21.47 1.76 37.94 3.95
253 254 3.636231 CACCTGGTGCGGAAGGGA 61.636 66.667 14.87 0.00 37.94 4.20
254 255 2.852075 ACCTGGTGCGGAAGGGAA 60.852 61.111 0.00 0.00 37.94 3.97
255 256 2.359975 CCTGGTGCGGAAGGGAAC 60.360 66.667 0.00 0.00 0.00 3.62
256 257 2.742372 CTGGTGCGGAAGGGAACG 60.742 66.667 0.00 0.00 0.00 3.95
257 258 3.234630 CTGGTGCGGAAGGGAACGA 62.235 63.158 0.00 0.00 0.00 3.85
258 259 2.434359 GGTGCGGAAGGGAACGAG 60.434 66.667 0.00 0.00 0.00 4.18
259 260 2.654877 GTGCGGAAGGGAACGAGA 59.345 61.111 0.00 0.00 0.00 4.04
260 261 1.446272 GTGCGGAAGGGAACGAGAG 60.446 63.158 0.00 0.00 0.00 3.20
261 262 1.605451 TGCGGAAGGGAACGAGAGA 60.605 57.895 0.00 0.00 0.00 3.10
262 263 1.139947 GCGGAAGGGAACGAGAGAG 59.860 63.158 0.00 0.00 0.00 3.20
263 264 1.596895 GCGGAAGGGAACGAGAGAGT 61.597 60.000 0.00 0.00 0.00 3.24
264 265 0.171455 CGGAAGGGAACGAGAGAGTG 59.829 60.000 0.00 0.00 0.00 3.51
265 266 1.258676 GGAAGGGAACGAGAGAGTGT 58.741 55.000 0.00 0.00 0.00 3.55
266 267 1.067495 GGAAGGGAACGAGAGAGTGTG 60.067 57.143 0.00 0.00 0.00 3.82
267 268 0.969894 AAGGGAACGAGAGAGTGTGG 59.030 55.000 0.00 0.00 0.00 4.17
268 269 0.112606 AGGGAACGAGAGAGTGTGGA 59.887 55.000 0.00 0.00 0.00 4.02
269 270 0.244178 GGGAACGAGAGAGTGTGGAC 59.756 60.000 0.00 0.00 0.00 4.02
270 271 0.109689 GGAACGAGAGAGTGTGGACG 60.110 60.000 0.00 0.00 0.00 4.79
271 272 0.109689 GAACGAGAGAGTGTGGACGG 60.110 60.000 0.00 0.00 0.00 4.79
272 273 1.524863 AACGAGAGAGTGTGGACGGG 61.525 60.000 0.00 0.00 0.00 5.28
273 274 2.701780 CGAGAGAGTGTGGACGGGG 61.702 68.421 0.00 0.00 0.00 5.73
274 275 1.304217 GAGAGAGTGTGGACGGGGA 60.304 63.158 0.00 0.00 0.00 4.81
275 276 0.898789 GAGAGAGTGTGGACGGGGAA 60.899 60.000 0.00 0.00 0.00 3.97
276 277 0.252284 AGAGAGTGTGGACGGGGAAT 60.252 55.000 0.00 0.00 0.00 3.01
277 278 0.175989 GAGAGTGTGGACGGGGAATC 59.824 60.000 0.00 0.00 0.00 2.52
278 279 1.153628 GAGTGTGGACGGGGAATCG 60.154 63.158 0.00 0.00 0.00 3.34
279 280 1.601419 GAGTGTGGACGGGGAATCGA 61.601 60.000 0.00 0.00 0.00 3.59
280 281 1.447314 GTGTGGACGGGGAATCGAC 60.447 63.158 0.00 0.00 0.00 4.20
281 282 2.186125 GTGGACGGGGAATCGACC 59.814 66.667 0.00 0.00 43.24 4.79
287 288 2.107141 GGGGAATCGACCGAGCTG 59.893 66.667 0.00 0.00 0.00 4.24
288 289 2.107141 GGGAATCGACCGAGCTGG 59.893 66.667 0.00 0.00 46.41 4.85
297 298 4.087892 CCGAGCTGGTGGGGTGAG 62.088 72.222 0.00 0.00 0.00 3.51
298 299 2.997315 CGAGCTGGTGGGGTGAGA 60.997 66.667 0.00 0.00 0.00 3.27
299 300 2.985456 GAGCTGGTGGGGTGAGAG 59.015 66.667 0.00 0.00 0.00 3.20
300 301 2.608988 AGCTGGTGGGGTGAGAGG 60.609 66.667 0.00 0.00 0.00 3.69
301 302 3.721706 GCTGGTGGGGTGAGAGGG 61.722 72.222 0.00 0.00 0.00 4.30
302 303 3.721706 CTGGTGGGGTGAGAGGGC 61.722 72.222 0.00 0.00 0.00 5.19
303 304 4.590553 TGGTGGGGTGAGAGGGCA 62.591 66.667 0.00 0.00 0.00 5.36
304 305 4.035102 GGTGGGGTGAGAGGGCAC 62.035 72.222 0.00 0.00 38.05 5.01
305 306 2.930562 GTGGGGTGAGAGGGCACT 60.931 66.667 0.00 0.00 38.78 4.40
306 307 2.121963 TGGGGTGAGAGGGCACTT 60.122 61.111 0.00 0.00 38.78 3.16
307 308 2.224159 TGGGGTGAGAGGGCACTTC 61.224 63.158 0.00 0.00 38.78 3.01
308 309 2.224159 GGGGTGAGAGGGCACTTCA 61.224 63.158 0.00 0.00 38.78 3.02
309 310 1.298014 GGGTGAGAGGGCACTTCAG 59.702 63.158 0.00 0.00 38.78 3.02
310 311 1.376553 GGTGAGAGGGCACTTCAGC 60.377 63.158 12.39 12.39 38.78 4.26
311 312 1.739562 GTGAGAGGGCACTTCAGCG 60.740 63.158 0.00 0.00 35.91 5.18
312 313 2.817396 GAGAGGGCACTTCAGCGC 60.817 66.667 0.00 0.00 46.61 5.92
319 320 4.988598 CACTTCAGCGCCCCACGT 62.989 66.667 2.29 0.00 46.11 4.49
320 321 4.250305 ACTTCAGCGCCCCACGTT 62.250 61.111 2.29 0.00 46.11 3.99
321 322 3.423154 CTTCAGCGCCCCACGTTC 61.423 66.667 2.29 0.00 46.11 3.95
334 335 2.755095 CGTTCGCGTCGTTCTCAC 59.245 61.111 5.77 0.00 35.57 3.51
335 336 1.724929 CGTTCGCGTCGTTCTCACT 60.725 57.895 5.77 0.00 35.57 3.41
336 337 1.653920 CGTTCGCGTCGTTCTCACTC 61.654 60.000 5.77 0.00 35.57 3.51
337 338 1.439858 TTCGCGTCGTTCTCACTCG 60.440 57.895 5.77 0.00 0.00 4.18
338 339 2.775359 TTCGCGTCGTTCTCACTCGG 62.775 60.000 5.77 0.00 0.00 4.63
339 340 2.559840 GCGTCGTTCTCACTCGGA 59.440 61.111 0.00 0.00 0.00 4.55
340 341 1.081641 GCGTCGTTCTCACTCGGAA 60.082 57.895 0.00 0.00 0.00 4.30
341 342 1.335697 GCGTCGTTCTCACTCGGAAC 61.336 60.000 0.00 0.00 39.49 3.62
354 355 3.192922 GGAACGAATGGCCGGTCG 61.193 66.667 22.39 22.39 46.39 4.79
355 356 2.125832 GAACGAATGGCCGGTCGA 60.126 61.111 28.65 0.00 39.64 4.20
356 357 2.433664 AACGAATGGCCGGTCGAC 60.434 61.111 28.65 7.13 39.64 4.20
357 358 4.789075 ACGAATGGCCGGTCGACG 62.789 66.667 28.65 16.62 39.64 5.12
382 383 4.412933 GGCATACGACTTGCGCTA 57.587 55.556 9.73 0.00 46.04 4.26
383 384 2.673074 GGCATACGACTTGCGCTAA 58.327 52.632 9.73 0.00 46.04 3.09
384 385 0.577269 GGCATACGACTTGCGCTAAG 59.423 55.000 9.73 13.21 46.04 2.18
385 386 1.556564 GCATACGACTTGCGCTAAGA 58.443 50.000 21.19 4.51 46.04 2.10
386 387 2.128035 GCATACGACTTGCGCTAAGAT 58.872 47.619 21.19 11.37 46.04 2.40
387 388 2.154007 GCATACGACTTGCGCTAAGATC 59.846 50.000 21.19 14.67 46.04 2.75
388 389 2.486951 TACGACTTGCGCTAAGATCC 57.513 50.000 21.19 11.36 46.04 3.36
389 390 0.525668 ACGACTTGCGCTAAGATCCG 60.526 55.000 21.19 20.14 46.04 4.18
390 391 0.525668 CGACTTGCGCTAAGATCCGT 60.526 55.000 21.19 3.12 39.76 4.69
391 392 0.924090 GACTTGCGCTAAGATCCGTG 59.076 55.000 21.19 0.00 39.76 4.94
392 393 1.084370 ACTTGCGCTAAGATCCGTGC 61.084 55.000 21.19 6.01 39.76 5.34
393 394 1.766143 CTTGCGCTAAGATCCGTGCC 61.766 60.000 9.73 0.00 38.76 5.01
394 395 3.330853 GCGCTAAGATCCGTGCCG 61.331 66.667 0.00 0.00 0.00 5.69
395 396 3.330853 CGCTAAGATCCGTGCCGC 61.331 66.667 0.00 0.00 0.00 6.53
396 397 2.967615 GCTAAGATCCGTGCCGCC 60.968 66.667 0.00 0.00 0.00 6.13
397 398 2.499205 CTAAGATCCGTGCCGCCA 59.501 61.111 0.00 0.00 0.00 5.69
398 399 1.883084 CTAAGATCCGTGCCGCCAC 60.883 63.158 0.00 0.00 38.62 5.01
399 400 2.572095 CTAAGATCCGTGCCGCCACA 62.572 60.000 0.00 0.00 42.17 4.17
400 401 2.173758 TAAGATCCGTGCCGCCACAA 62.174 55.000 0.00 0.00 42.17 3.33
401 402 2.819984 AAGATCCGTGCCGCCACAAT 62.820 55.000 0.00 0.00 42.17 2.71
402 403 2.823829 GATCCGTGCCGCCACAATC 61.824 63.158 0.00 0.00 42.17 2.67
405 406 3.361158 CGTGCCGCCACAATCCAA 61.361 61.111 0.00 0.00 42.17 3.53
406 407 2.258286 GTGCCGCCACAATCCAAC 59.742 61.111 0.00 0.00 41.67 3.77
407 408 3.361158 TGCCGCCACAATCCAACG 61.361 61.111 0.00 0.00 0.00 4.10
408 409 4.114997 GCCGCCACAATCCAACGG 62.115 66.667 0.00 0.00 46.50 4.44
409 410 2.671619 CCGCCACAATCCAACGGT 60.672 61.111 0.00 0.00 39.05 4.83
410 411 2.265182 CCGCCACAATCCAACGGTT 61.265 57.895 0.00 0.00 39.05 4.44
411 412 1.209127 CGCCACAATCCAACGGTTC 59.791 57.895 0.00 0.00 0.00 3.62
412 413 1.234615 CGCCACAATCCAACGGTTCT 61.235 55.000 0.00 0.00 0.00 3.01
413 414 1.816074 GCCACAATCCAACGGTTCTA 58.184 50.000 0.00 0.00 0.00 2.10
414 415 2.156098 GCCACAATCCAACGGTTCTAA 58.844 47.619 0.00 0.00 0.00 2.10
415 416 2.095415 GCCACAATCCAACGGTTCTAAC 60.095 50.000 0.00 0.00 0.00 2.34
416 417 2.158841 CCACAATCCAACGGTTCTAACG 59.841 50.000 0.00 0.00 37.36 3.18
418 419 3.989167 CACAATCCAACGGTTCTAACGTA 59.011 43.478 0.00 0.00 44.83 3.57
419 420 4.090930 CACAATCCAACGGTTCTAACGTAG 59.909 45.833 0.00 0.00 44.83 3.51
432 433 3.993382 ACGTAGTTCGCTGGGAAAA 57.007 47.368 8.84 0.00 37.78 2.29
433 434 1.505425 ACGTAGTTCGCTGGGAAAAC 58.495 50.000 8.84 9.37 37.78 2.43
434 435 0.437295 CGTAGTTCGCTGGGAAAACG 59.563 55.000 20.79 20.79 38.85 3.60
435 436 1.505425 GTAGTTCGCTGGGAAAACGT 58.495 50.000 8.84 0.00 36.14 3.99
436 437 1.458445 GTAGTTCGCTGGGAAAACGTC 59.542 52.381 8.84 0.00 36.14 4.34
444 445 3.053896 GGAAAACGTCCCCGGCTG 61.054 66.667 0.00 0.00 41.10 4.85
445 446 3.733960 GAAAACGTCCCCGGCTGC 61.734 66.667 0.00 0.00 38.78 5.25
461 462 2.263540 GCCGTCGGCCAGTTAAGA 59.736 61.111 26.23 0.00 44.06 2.10
462 463 1.153429 GCCGTCGGCCAGTTAAGAT 60.153 57.895 26.23 0.00 44.06 2.40
463 464 0.743345 GCCGTCGGCCAGTTAAGATT 60.743 55.000 26.23 0.00 44.06 2.40
464 465 1.734163 CCGTCGGCCAGTTAAGATTT 58.266 50.000 2.24 0.00 0.00 2.17
465 466 1.664151 CCGTCGGCCAGTTAAGATTTC 59.336 52.381 2.24 0.00 0.00 2.17
466 467 1.664151 CGTCGGCCAGTTAAGATTTCC 59.336 52.381 2.24 0.00 0.00 3.13
467 468 2.014857 GTCGGCCAGTTAAGATTTCCC 58.985 52.381 2.24 0.00 0.00 3.97
468 469 1.913419 TCGGCCAGTTAAGATTTCCCT 59.087 47.619 2.24 0.00 0.00 4.20
469 470 2.307686 TCGGCCAGTTAAGATTTCCCTT 59.692 45.455 2.24 0.00 0.00 3.95
470 471 2.683362 CGGCCAGTTAAGATTTCCCTTC 59.317 50.000 2.24 0.00 0.00 3.46
471 472 3.622455 CGGCCAGTTAAGATTTCCCTTCT 60.622 47.826 2.24 0.00 0.00 2.85
472 473 4.344978 GGCCAGTTAAGATTTCCCTTCTT 58.655 43.478 0.00 0.00 37.25 2.52
473 474 4.772624 GGCCAGTTAAGATTTCCCTTCTTT 59.227 41.667 0.00 0.00 35.19 2.52
474 475 5.246203 GGCCAGTTAAGATTTCCCTTCTTTT 59.754 40.000 0.00 0.00 35.19 2.27
475 476 6.436218 GGCCAGTTAAGATTTCCCTTCTTTTA 59.564 38.462 0.00 0.00 35.19 1.52
476 477 7.363007 GGCCAGTTAAGATTTCCCTTCTTTTAG 60.363 40.741 0.00 0.00 35.19 1.85
477 478 7.539436 CCAGTTAAGATTTCCCTTCTTTTAGC 58.461 38.462 0.00 0.00 35.19 3.09
478 479 7.394641 CCAGTTAAGATTTCCCTTCTTTTAGCT 59.605 37.037 0.00 0.00 35.19 3.32
479 480 8.454894 CAGTTAAGATTTCCCTTCTTTTAGCTC 58.545 37.037 0.00 0.00 35.19 4.09
480 481 8.387039 AGTTAAGATTTCCCTTCTTTTAGCTCT 58.613 33.333 0.00 0.00 35.19 4.09
481 482 8.454894 GTTAAGATTTCCCTTCTTTTAGCTCTG 58.545 37.037 0.00 0.00 35.19 3.35
482 483 4.946772 AGATTTCCCTTCTTTTAGCTCTGC 59.053 41.667 0.00 0.00 0.00 4.26
483 484 2.386661 TCCCTTCTTTTAGCTCTGCG 57.613 50.000 0.00 0.00 0.00 5.18
484 485 1.623811 TCCCTTCTTTTAGCTCTGCGT 59.376 47.619 0.00 0.00 0.00 5.24
485 486 2.038557 TCCCTTCTTTTAGCTCTGCGTT 59.961 45.455 0.00 0.00 0.00 4.84
486 487 2.814336 CCCTTCTTTTAGCTCTGCGTTT 59.186 45.455 0.00 0.00 0.00 3.60
487 488 4.000988 CCCTTCTTTTAGCTCTGCGTTTA 58.999 43.478 0.00 0.00 0.00 2.01
488 489 4.093556 CCCTTCTTTTAGCTCTGCGTTTAG 59.906 45.833 0.00 0.00 0.00 1.85
505 506 6.729104 CGTTTAGCAAATACTCCGTACTAG 57.271 41.667 0.00 0.00 0.00 2.57
506 507 6.489675 CGTTTAGCAAATACTCCGTACTAGA 58.510 40.000 0.00 0.00 0.00 2.43
507 508 6.413235 CGTTTAGCAAATACTCCGTACTAGAC 59.587 42.308 0.00 0.00 0.00 2.59
508 509 7.253422 GTTTAGCAAATACTCCGTACTAGACA 58.747 38.462 0.00 0.00 0.00 3.41
509 510 5.909621 AGCAAATACTCCGTACTAGACAA 57.090 39.130 0.00 0.00 0.00 3.18
510 511 6.276832 AGCAAATACTCCGTACTAGACAAA 57.723 37.500 0.00 0.00 0.00 2.83
511 512 6.694447 AGCAAATACTCCGTACTAGACAAAA 58.306 36.000 0.00 0.00 0.00 2.44
512 513 7.156673 AGCAAATACTCCGTACTAGACAAAAA 58.843 34.615 0.00 0.00 0.00 1.94
513 514 7.331193 AGCAAATACTCCGTACTAGACAAAAAG 59.669 37.037 0.00 0.00 0.00 2.27
514 515 7.412672 GCAAATACTCCGTACTAGACAAAAAGG 60.413 40.741 0.00 0.00 0.00 3.11
515 516 6.847421 ATACTCCGTACTAGACAAAAAGGT 57.153 37.500 0.00 0.00 0.00 3.50
516 517 7.944729 ATACTCCGTACTAGACAAAAAGGTA 57.055 36.000 0.00 0.00 0.00 3.08
517 518 6.264841 ACTCCGTACTAGACAAAAAGGTAG 57.735 41.667 0.00 0.00 0.00 3.18
518 519 6.006449 ACTCCGTACTAGACAAAAAGGTAGA 58.994 40.000 0.00 0.00 0.00 2.59
519 520 6.150809 ACTCCGTACTAGACAAAAAGGTAGAG 59.849 42.308 0.00 0.00 0.00 2.43
520 521 5.416952 TCCGTACTAGACAAAAAGGTAGAGG 59.583 44.000 0.00 0.00 0.00 3.69
521 522 5.393896 CCGTACTAGACAAAAAGGTAGAGGG 60.394 48.000 0.00 0.00 0.00 4.30
522 523 5.416952 CGTACTAGACAAAAAGGTAGAGGGA 59.583 44.000 0.00 0.00 0.00 4.20
523 524 6.071728 CGTACTAGACAAAAAGGTAGAGGGAA 60.072 42.308 0.00 0.00 0.00 3.97
524 525 6.361768 ACTAGACAAAAAGGTAGAGGGAAG 57.638 41.667 0.00 0.00 0.00 3.46
525 526 5.845065 ACTAGACAAAAAGGTAGAGGGAAGT 59.155 40.000 0.00 0.00 0.00 3.01
526 527 5.648330 AGACAAAAAGGTAGAGGGAAGTT 57.352 39.130 0.00 0.00 0.00 2.66
530 531 5.130350 CAAAAAGGTAGAGGGAAGTTCACA 58.870 41.667 8.09 0.00 0.00 3.58
533 534 2.303311 AGGTAGAGGGAAGTTCACAAGC 59.697 50.000 8.09 2.25 0.00 4.01
618 623 2.765250 ATCTTTCGTCACGCCGTGCT 62.765 55.000 13.39 0.00 32.98 4.40
627 632 2.514592 CGCCGTGCTTCCATCCAT 60.515 61.111 0.00 0.00 0.00 3.41
629 634 2.189499 GCCGTGCTTCCATCCATCC 61.189 63.158 0.00 0.00 0.00 3.51
631 636 0.179009 CCGTGCTTCCATCCATCCAT 60.179 55.000 0.00 0.00 0.00 3.41
632 637 1.233019 CGTGCTTCCATCCATCCATC 58.767 55.000 0.00 0.00 0.00 3.51
633 638 1.613836 GTGCTTCCATCCATCCATCC 58.386 55.000 0.00 0.00 0.00 3.51
634 639 0.109153 TGCTTCCATCCATCCATCCG 59.891 55.000 0.00 0.00 0.00 4.18
782 787 1.379443 TCGACCAGGCCGACATACT 60.379 57.895 0.00 0.00 0.00 2.12
857 864 4.034258 GCGACAGGGACGTGACGA 62.034 66.667 13.70 0.00 37.74 4.20
859 866 2.126424 GACAGGGACGTGACGAGC 60.126 66.667 13.70 2.67 0.00 5.03
860 867 2.597805 ACAGGGACGTGACGAGCT 60.598 61.111 13.70 0.00 0.00 4.09
861 868 2.126307 CAGGGACGTGACGAGCTG 60.126 66.667 13.70 0.00 0.00 4.24
862 869 3.374402 AGGGACGTGACGAGCTGG 61.374 66.667 13.70 0.00 0.00 4.85
864 871 4.057428 GGACGTGACGAGCTGGCT 62.057 66.667 13.70 0.00 0.00 4.75
865 872 2.505118 GACGTGACGAGCTGGCTC 60.505 66.667 13.70 12.09 39.55 4.70
866 873 2.983930 GACGTGACGAGCTGGCTCT 61.984 63.158 13.70 7.46 40.69 4.09
867 874 1.645704 GACGTGACGAGCTGGCTCTA 61.646 60.000 13.70 4.45 40.69 2.43
868 875 1.226435 CGTGACGAGCTGGCTCTAC 60.226 63.158 18.57 13.53 40.69 2.59
869 876 1.649390 CGTGACGAGCTGGCTCTACT 61.649 60.000 18.57 3.12 40.69 2.57
870 877 0.099791 GTGACGAGCTGGCTCTACTC 59.900 60.000 18.57 11.28 40.69 2.59
871 878 0.034960 TGACGAGCTGGCTCTACTCT 60.035 55.000 18.57 0.00 40.69 3.24
872 879 1.209747 TGACGAGCTGGCTCTACTCTA 59.790 52.381 18.57 0.00 40.69 2.43
873 880 1.600485 GACGAGCTGGCTCTACTCTAC 59.400 57.143 18.57 1.52 40.69 2.59
874 881 1.210967 ACGAGCTGGCTCTACTCTACT 59.789 52.381 18.57 0.00 40.69 2.57
875 882 2.435069 ACGAGCTGGCTCTACTCTACTA 59.565 50.000 18.57 0.00 40.69 1.82
942 953 4.507916 TCCCTCCTCCGCTCTCCG 62.508 72.222 0.00 0.00 0.00 4.63
1021 1032 3.157949 CCCCCTTCCTCCTCTCGC 61.158 72.222 0.00 0.00 0.00 5.03
1022 1033 2.042435 CCCCTTCCTCCTCTCGCT 60.042 66.667 0.00 0.00 0.00 4.93
1023 1034 2.430610 CCCCTTCCTCCTCTCGCTG 61.431 68.421 0.00 0.00 0.00 5.18
1024 1035 1.684049 CCCTTCCTCCTCTCGCTGT 60.684 63.158 0.00 0.00 0.00 4.40
1025 1036 1.671901 CCCTTCCTCCTCTCGCTGTC 61.672 65.000 0.00 0.00 0.00 3.51
1026 1037 1.671901 CCTTCCTCCTCTCGCTGTCC 61.672 65.000 0.00 0.00 0.00 4.02
1027 1038 1.671901 CTTCCTCCTCTCGCTGTCCC 61.672 65.000 0.00 0.00 0.00 4.46
1028 1039 2.043450 CCTCCTCTCGCTGTCCCT 60.043 66.667 0.00 0.00 0.00 4.20
1029 1040 2.124693 CCTCCTCTCGCTGTCCCTC 61.125 68.421 0.00 0.00 0.00 4.30
1030 1041 2.043852 TCCTCTCGCTGTCCCTCC 60.044 66.667 0.00 0.00 0.00 4.30
1031 1042 3.151022 CCTCTCGCTGTCCCTCCC 61.151 72.222 0.00 0.00 0.00 4.30
1032 1043 2.363018 CTCTCGCTGTCCCTCCCA 60.363 66.667 0.00 0.00 0.00 4.37
1033 1044 2.363018 TCTCGCTGTCCCTCCCAG 60.363 66.667 0.00 0.00 0.00 4.45
1038 1049 2.368594 CTGTCCCTCCCAGCCCTA 59.631 66.667 0.00 0.00 0.00 3.53
1039 1050 1.306997 CTGTCCCTCCCAGCCCTAA 60.307 63.158 0.00 0.00 0.00 2.69
1040 1051 1.615424 TGTCCCTCCCAGCCCTAAC 60.615 63.158 0.00 0.00 0.00 2.34
1041 1052 2.042261 TCCCTCCCAGCCCTAACC 59.958 66.667 0.00 0.00 0.00 2.85
1042 1053 3.097162 CCCTCCCAGCCCTAACCC 61.097 72.222 0.00 0.00 0.00 4.11
1043 1054 2.042930 CCTCCCAGCCCTAACCCT 59.957 66.667 0.00 0.00 0.00 4.34
1044 1055 1.316969 CCTCCCAGCCCTAACCCTA 59.683 63.158 0.00 0.00 0.00 3.53
1045 1056 1.054978 CCTCCCAGCCCTAACCCTAC 61.055 65.000 0.00 0.00 0.00 3.18
1046 1057 1.003835 TCCCAGCCCTAACCCTACC 59.996 63.158 0.00 0.00 0.00 3.18
1047 1058 2.076803 CCCAGCCCTAACCCTACCC 61.077 68.421 0.00 0.00 0.00 3.69
1048 1059 2.076803 CCAGCCCTAACCCTACCCC 61.077 68.421 0.00 0.00 0.00 4.95
1049 1060 1.004361 CAGCCCTAACCCTACCCCT 59.996 63.158 0.00 0.00 0.00 4.79
1050 1061 1.004361 AGCCCTAACCCTACCCCTG 59.996 63.158 0.00 0.00 0.00 4.45
1051 1062 2.753884 GCCCTAACCCTACCCCTGC 61.754 68.421 0.00 0.00 0.00 4.85
1052 1063 2.076803 CCCTAACCCTACCCCTGCC 61.077 68.421 0.00 0.00 0.00 4.85
1053 1064 1.004361 CCTAACCCTACCCCTGCCT 59.996 63.158 0.00 0.00 0.00 4.75
1054 1065 1.054978 CCTAACCCTACCCCTGCCTC 61.055 65.000 0.00 0.00 0.00 4.70
1055 1066 1.003835 TAACCCTACCCCTGCCTCC 59.996 63.158 0.00 0.00 0.00 4.30
1056 1067 2.556608 TAACCCTACCCCTGCCTCCC 62.557 65.000 0.00 0.00 0.00 4.30
1281 1430 1.000486 CCAGGAGGAGGTCGAGGAA 60.000 63.158 0.00 0.00 36.89 3.36
1564 1713 1.805945 GTAACCGAGCCGCTCTGTG 60.806 63.158 17.04 8.67 28.95 3.66
1569 1718 2.163390 CGAGCCGCTCTGTGATGTG 61.163 63.158 18.14 0.00 0.00 3.21
1576 1725 3.780902 CCGCTCTGTGATGTGTAATGTA 58.219 45.455 0.00 0.00 0.00 2.29
1748 1900 6.928492 TGTTGGTTCCTTATTGATTTTGCTTC 59.072 34.615 0.00 0.00 0.00 3.86
1785 1937 3.615811 AGGGAGGCAGGGTCTGGA 61.616 66.667 0.00 0.00 31.21 3.86
1910 2062 0.373716 ACGCGCATTTTCGATTCTCC 59.626 50.000 5.73 0.00 0.00 3.71
1948 2100 3.573598 TGTGTTGTTTTCAGTTGTGCAG 58.426 40.909 0.00 0.00 0.00 4.41
2017 2169 2.613133 CACCAACTTTTGCAACCAATGG 59.387 45.455 15.38 15.38 34.84 3.16
2051 2203 3.817084 GCATAGAGCTCATTGTGCCATAA 59.183 43.478 17.77 0.00 41.15 1.90
2076 2228 1.125711 AGTTACAGCCCGTGGAAGGT 61.126 55.000 0.00 0.00 25.26 3.50
2077 2229 0.953960 GTTACAGCCCGTGGAAGGTG 60.954 60.000 0.00 0.00 37.50 4.00
2078 2230 2.119484 TTACAGCCCGTGGAAGGTGG 62.119 60.000 0.00 0.00 35.82 4.61
2084 2236 0.958876 CCCGTGGAAGGTGGCTTAAC 60.959 60.000 0.00 0.00 0.00 2.01
2139 2294 2.032681 GCAGGAAGGAAGTGCCGT 59.967 61.111 0.00 0.00 43.43 5.68
2140 2295 1.600916 GCAGGAAGGAAGTGCCGTT 60.601 57.895 0.00 0.00 43.43 4.44
2196 2351 1.923909 CCGGACTTCCCTTTCCCCT 60.924 63.158 0.00 0.00 0.00 4.79
2216 2371 7.016914 TCCCCTGACATATATAACTAGCAGTT 58.983 38.462 6.74 6.74 41.97 3.16
2301 2456 9.817809 TCTATGTCGCATTCTAAAAATAGAAGT 57.182 29.630 4.78 0.00 39.19 3.01
2362 2517 0.663269 TGTCGTCGTGCTACTGCTTG 60.663 55.000 0.00 0.00 40.48 4.01
2549 2704 0.258774 TCCTTCCAAGCTAATGGCCC 59.741 55.000 0.00 0.00 43.05 5.80
2581 2736 9.109393 TGTTAAATCTCTTACAATACATGGAGC 57.891 33.333 0.00 0.00 0.00 4.70
3376 3534 1.001378 CCTTTGAGCAGAAAACCACCG 60.001 52.381 0.00 0.00 0.00 4.94
3686 3851 6.890663 TTTGCATTCAGTTTTCTTCACTTG 57.109 33.333 0.00 0.00 0.00 3.16
3821 3986 1.447217 CCTGCATCATACCCTCGCA 59.553 57.895 0.00 0.00 0.00 5.10
3927 4092 4.291540 TGCAGTCTGACAACATGAAAAC 57.708 40.909 10.88 0.00 0.00 2.43
4053 4218 4.556912 TCGCAACGCAAACAAATGATTATC 59.443 37.500 0.00 0.00 0.00 1.75
4129 4294 2.613133 AGGAAGTAGTTAGCTAGTCGCG 59.387 50.000 0.00 0.00 45.59 5.87
4338 4522 8.663911 CCATTTGTTGTATTGTTTTTCAAGTGT 58.336 29.630 0.00 0.00 39.55 3.55
4714 4944 2.159819 ATCTGCTCGAGCGTGGTTGT 62.160 55.000 30.75 10.68 45.83 3.32
4742 4972 4.974438 TTGAGTCCAGGGGGCGGT 62.974 66.667 0.00 0.00 0.00 5.68
4895 5685 3.130340 TCCCAGCTGTGTCTTTGTTTTTC 59.870 43.478 13.81 0.00 0.00 2.29
5261 6055 3.424962 GCGAAGAAGCAGATGTGGTAAAC 60.425 47.826 0.00 0.00 37.05 2.01
5623 6417 3.412386 ACAAGCCAAGTAAGTCCATGTC 58.588 45.455 0.00 0.00 0.00 3.06
5626 6420 1.004277 GCCAAGTAAGTCCATGTCCCA 59.996 52.381 0.00 0.00 0.00 4.37
5885 6690 8.409371 TCTTAATGAGTGCAAAACAAACACATA 58.591 29.630 0.00 0.00 36.76 2.29
5896 6701 7.042791 GCAAAACAAACACATACAGCAAGTTAT 60.043 33.333 0.00 0.00 0.00 1.89
5907 6712 7.283127 ACATACAGCAAGTTATATGGAAACCTG 59.717 37.037 0.00 0.00 30.71 4.00
5950 6755 3.580458 CTCCAGTCCATATTACAGAGGGG 59.420 52.174 0.00 0.00 0.00 4.79
6096 6902 7.259290 TGTTTCTAGGAGTAAAGCAAGTTTG 57.741 36.000 0.00 0.00 0.00 2.93
6164 6970 2.671396 GTGATGACACGTGTCCATAACC 59.329 50.000 38.12 22.69 44.15 2.85
6187 6993 7.212274 ACCTTTGTGTTAGAAATACTACGTGT 58.788 34.615 0.00 0.00 0.00 4.49
6322 7129 6.568869 TGTATTGGTTTGTTGGAAAGTCAAG 58.431 36.000 0.00 0.00 0.00 3.02
6428 7235 4.723789 AGGGTCTGATGATACTGATTTGGT 59.276 41.667 0.00 0.00 0.00 3.67
6667 7474 7.226720 AGAGTCTATGACAATGTGAAAAACGTT 59.773 33.333 0.00 0.00 34.60 3.99
6690 7497 6.435292 TTCATATTAAGTTAGGGAGGGAGC 57.565 41.667 0.00 0.00 0.00 4.70
6931 7738 1.135199 GCATTTCCATGGAGCACACAG 60.135 52.381 15.53 3.56 0.00 3.66
6967 7774 4.937620 CAGCCAGCAGAAGAATGTTAGTAA 59.062 41.667 0.00 0.00 0.00 2.24
7008 7815 9.478768 GGTTCTAGAGTAAGAAATATTACCTGC 57.521 37.037 0.00 0.00 37.24 4.85
7193 8040 2.558795 TGTGTACTGCAGGAAGTCTCTC 59.441 50.000 19.93 0.00 0.00 3.20
7234 8168 3.573538 TGTGTTTGCCTGCTTAATCACAT 59.426 39.130 0.00 0.00 33.80 3.21
7246 8180 5.711506 TGCTTAATCACATTCTGTTCCATGT 59.288 36.000 0.00 0.00 33.72 3.21
7247 8181 6.127925 TGCTTAATCACATTCTGTTCCATGTC 60.128 38.462 0.00 0.00 30.90 3.06
7248 8182 6.127925 GCTTAATCACATTCTGTTCCATGTCA 60.128 38.462 0.00 0.00 30.90 3.58
7293 8231 2.242769 TACATCGTCATCGCTATCGC 57.757 50.000 0.00 0.00 36.96 4.58
7325 8263 9.031537 TCTTGAGTATAATCAAACACTGGACTA 57.968 33.333 15.76 0.00 34.02 2.59
7424 8363 2.240493 ATGAGGTAATGGCGTGCTAC 57.760 50.000 0.00 0.00 0.00 3.58
7432 8371 0.460987 ATGGCGTGCTACTCTGCTTC 60.461 55.000 0.00 0.00 0.00 3.86
7443 8382 4.382040 GCTACTCTGCTTCCATTGTCACTA 60.382 45.833 0.00 0.00 0.00 2.74
7451 8390 4.515191 GCTTCCATTGTCACTACTTTCACA 59.485 41.667 0.00 0.00 0.00 3.58
7471 8410 4.813161 CACATCATCTGATAGTGGGTGTTC 59.187 45.833 11.61 0.00 33.75 3.18
7586 8525 1.896220 TGATTGTCACTTGACCTGCC 58.104 50.000 6.91 0.00 44.15 4.85
7587 8526 1.421268 TGATTGTCACTTGACCTGCCT 59.579 47.619 6.91 0.00 44.15 4.75
7588 8527 1.808945 GATTGTCACTTGACCTGCCTG 59.191 52.381 6.91 0.00 44.15 4.85
7589 8528 0.819259 TTGTCACTTGACCTGCCTGC 60.819 55.000 6.91 0.00 44.15 4.85
7600 8539 0.254178 CCTGCCTGCATCCTTGTAGT 59.746 55.000 0.00 0.00 34.08 2.73
7656 8595 2.905075 TGGTGCCAACTGATTAGATCG 58.095 47.619 0.00 0.00 0.00 3.69
7676 8615 2.416893 CGCTTCTTTCTTCCTTGTAGCC 59.583 50.000 0.00 0.00 0.00 3.93
7678 8617 3.438434 GCTTCTTTCTTCCTTGTAGCCTG 59.562 47.826 0.00 0.00 0.00 4.85
7709 8650 1.135972 CCGCCTGTCGTTTCTTGATTG 60.136 52.381 0.00 0.00 36.19 2.67
7714 8655 4.441087 GCCTGTCGTTTCTTGATTGTTTTC 59.559 41.667 0.00 0.00 0.00 2.29
7715 8656 5.733373 GCCTGTCGTTTCTTGATTGTTTTCT 60.733 40.000 0.00 0.00 0.00 2.52
7727 8668 2.472695 TGTTTTCTAGAGCCACGCAT 57.527 45.000 0.00 0.00 0.00 4.73
7733 8674 1.134995 TCTAGAGCCACGCATGACTTG 60.135 52.381 0.00 0.00 0.00 3.16
7761 8703 1.222567 AGGGTCAGGGTGTTGTCTTT 58.777 50.000 0.00 0.00 0.00 2.52
7762 8704 1.143073 AGGGTCAGGGTGTTGTCTTTC 59.857 52.381 0.00 0.00 0.00 2.62
7763 8705 1.133915 GGGTCAGGGTGTTGTCTTTCA 60.134 52.381 0.00 0.00 0.00 2.69
7847 8789 1.418334 TCTCCCTGGAGAAGCATAGC 58.582 55.000 13.47 0.00 46.89 2.97
7901 8843 2.158959 GTTCGCCATCGGTGTCTCG 61.159 63.158 0.00 0.00 34.40 4.04
7946 8888 2.416547 CTGGTGATAGCAAAGTTGTCCG 59.583 50.000 0.00 0.00 0.00 4.79
8047 8991 5.665916 TCTGATAGAACAGAGCATGTCAA 57.334 39.130 0.00 0.00 43.00 3.18
8048 8992 6.041423 TCTGATAGAACAGAGCATGTCAAA 57.959 37.500 0.00 0.00 43.00 2.69
8049 8993 6.647229 TCTGATAGAACAGAGCATGTCAAAT 58.353 36.000 0.00 0.00 43.00 2.32
8050 8994 6.537660 TCTGATAGAACAGAGCATGTCAAATG 59.462 38.462 0.00 0.00 43.00 2.32
8051 8995 3.844577 AGAACAGAGCATGTCAAATGC 57.155 42.857 0.00 0.00 43.00 3.56
8052 8996 3.151554 AGAACAGAGCATGTCAAATGCA 58.848 40.909 1.67 0.00 46.77 3.96
8054 8998 4.219944 AGAACAGAGCATGTCAAATGCATT 59.780 37.500 5.99 5.99 46.77 3.56
8055 8999 3.845178 ACAGAGCATGTCAAATGCATTG 58.155 40.909 13.82 7.57 46.77 2.82
8056 9000 3.186909 CAGAGCATGTCAAATGCATTGG 58.813 45.455 13.82 10.58 46.77 3.16
8057 9001 2.829720 AGAGCATGTCAAATGCATTGGT 59.170 40.909 13.82 5.37 46.77 3.67
8060 9004 2.417239 GCATGTCAAATGCATTGGTTGG 59.583 45.455 13.82 2.97 44.00 3.77
8061 9005 2.835580 TGTCAAATGCATTGGTTGGG 57.164 45.000 13.82 0.00 39.62 4.12
8080 9024 3.330701 TGGGATTGGTTGGGATAGCTATC 59.669 47.826 23.23 23.23 0.00 2.08
8082 9026 3.600388 GATTGGTTGGGATAGCTATCGG 58.400 50.000 24.05 0.00 33.52 4.18
8095 9039 0.030908 CTATCGGTCGGCAGAAGGTC 59.969 60.000 0.00 0.00 0.00 3.85
8121 9065 2.979813 GCTCAGGCACAAATACAAAACG 59.020 45.455 0.00 0.00 38.54 3.60
8129 9073 3.974401 CACAAATACAAAACGCAGTGGAG 59.026 43.478 0.00 0.00 45.00 3.86
8164 9108 1.758280 TGGGTCGTCACAGTACAGTTT 59.242 47.619 0.00 0.00 0.00 2.66
8165 9109 2.132762 GGGTCGTCACAGTACAGTTTG 58.867 52.381 0.00 0.00 0.00 2.93
8167 9111 3.450578 GGTCGTCACAGTACAGTTTGAA 58.549 45.455 0.00 0.00 0.00 2.69
8169 9113 3.489785 GTCGTCACAGTACAGTTTGAAGG 59.510 47.826 0.00 0.00 0.00 3.46
8170 9114 2.221055 CGTCACAGTACAGTTTGAAGGC 59.779 50.000 0.00 0.00 0.00 4.35
8171 9115 3.202906 GTCACAGTACAGTTTGAAGGCA 58.797 45.455 0.00 0.00 0.00 4.75
8172 9116 3.815401 GTCACAGTACAGTTTGAAGGCAT 59.185 43.478 0.00 0.00 0.00 4.40
8173 9117 3.814842 TCACAGTACAGTTTGAAGGCATG 59.185 43.478 0.00 0.00 0.00 4.06
8174 9118 2.554032 ACAGTACAGTTTGAAGGCATGC 59.446 45.455 9.90 9.90 0.00 4.06
8188 9132 3.429043 CATGCATGCCTGAAACACC 57.571 52.632 17.08 0.00 0.00 4.16
8223 9167 9.398170 ACAGTGAAATCGTTTATCTTTCATTTG 57.602 29.630 0.00 0.00 40.05 2.32
8271 9219 6.889177 ACCCCATTGTTGTTTCTTTCATTTTT 59.111 30.769 0.00 0.00 0.00 1.94
8300 9248 2.884320 ACAAGGAATTAACCACCCCAC 58.116 47.619 0.00 0.00 0.00 4.61
8354 9302 2.834549 CCCGCCCACTTCATCTATAGAT 59.165 50.000 9.57 9.57 34.56 1.98
8363 9314 9.381033 CCCACTTCATCTATAGATTGATTGATC 57.619 37.037 12.75 0.00 31.21 2.92
8471 9427 5.105853 TGACCTTATTCTACCCCCTTCTTT 58.894 41.667 0.00 0.00 0.00 2.52
8472 9428 5.554350 TGACCTTATTCTACCCCCTTCTTTT 59.446 40.000 0.00 0.00 0.00 2.27
8473 9429 5.827756 ACCTTATTCTACCCCCTTCTTTTG 58.172 41.667 0.00 0.00 0.00 2.44
8474 9430 5.554350 ACCTTATTCTACCCCCTTCTTTTGA 59.446 40.000 0.00 0.00 0.00 2.69
8475 9431 6.219772 ACCTTATTCTACCCCCTTCTTTTGAT 59.780 38.462 0.00 0.00 0.00 2.57
8476 9432 6.773200 CCTTATTCTACCCCCTTCTTTTGATC 59.227 42.308 0.00 0.00 0.00 2.92
8477 9433 5.796502 ATTCTACCCCCTTCTTTTGATCA 57.203 39.130 0.00 0.00 0.00 2.92
8478 9434 5.796502 TTCTACCCCCTTCTTTTGATCAT 57.203 39.130 0.00 0.00 0.00 2.45
8479 9435 5.373812 TCTACCCCCTTCTTTTGATCATC 57.626 43.478 0.00 0.00 0.00 2.92
8480 9436 3.388552 ACCCCCTTCTTTTGATCATCC 57.611 47.619 0.00 0.00 0.00 3.51
8481 9437 2.654385 ACCCCCTTCTTTTGATCATCCA 59.346 45.455 0.00 0.00 0.00 3.41
8482 9438 3.077391 ACCCCCTTCTTTTGATCATCCAA 59.923 43.478 0.00 0.00 0.00 3.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.768870 ACTCAAGATGGTAATCCCCCG 59.231 52.381 0.00 0.00 32.77 5.73
1 2 3.244112 CGTACTCAAGATGGTAATCCCCC 60.244 52.174 0.00 0.00 32.77 5.40
2 3 3.640029 TCGTACTCAAGATGGTAATCCCC 59.360 47.826 0.00 0.00 32.77 4.81
3 4 4.098960 TGTCGTACTCAAGATGGTAATCCC 59.901 45.833 0.00 0.00 32.77 3.85
4 5 5.258456 TGTCGTACTCAAGATGGTAATCC 57.742 43.478 0.00 0.00 32.77 3.01
5 6 7.203910 AGAATGTCGTACTCAAGATGGTAATC 58.796 38.462 0.00 0.00 0.00 1.75
6 7 7.113658 AGAATGTCGTACTCAAGATGGTAAT 57.886 36.000 0.00 0.00 0.00 1.89
7 8 6.525578 AGAATGTCGTACTCAAGATGGTAA 57.474 37.500 0.00 0.00 0.00 2.85
8 9 6.152154 TGAAGAATGTCGTACTCAAGATGGTA 59.848 38.462 0.00 0.00 0.00 3.25
9 10 5.047306 TGAAGAATGTCGTACTCAAGATGGT 60.047 40.000 0.00 0.00 0.00 3.55
10 11 5.410924 TGAAGAATGTCGTACTCAAGATGG 58.589 41.667 0.00 0.00 0.00 3.51
11 12 6.096036 ACTGAAGAATGTCGTACTCAAGATG 58.904 40.000 0.00 0.00 0.00 2.90
12 13 6.274157 ACTGAAGAATGTCGTACTCAAGAT 57.726 37.500 0.00 0.00 0.00 2.40
13 14 5.707242 ACTGAAGAATGTCGTACTCAAGA 57.293 39.130 0.00 0.00 0.00 3.02
14 15 5.692204 ACAACTGAAGAATGTCGTACTCAAG 59.308 40.000 0.00 0.00 0.00 3.02
15 16 5.597806 ACAACTGAAGAATGTCGTACTCAA 58.402 37.500 0.00 0.00 0.00 3.02
16 17 5.196341 ACAACTGAAGAATGTCGTACTCA 57.804 39.130 0.00 0.00 0.00 3.41
17 18 5.107453 CCAACAACTGAAGAATGTCGTACTC 60.107 44.000 0.00 0.00 0.00 2.59
18 19 4.750098 CCAACAACTGAAGAATGTCGTACT 59.250 41.667 0.00 0.00 0.00 2.73
19 20 4.510340 ACCAACAACTGAAGAATGTCGTAC 59.490 41.667 0.00 0.00 0.00 3.67
20 21 4.699637 ACCAACAACTGAAGAATGTCGTA 58.300 39.130 0.00 0.00 0.00 3.43
21 22 3.541632 ACCAACAACTGAAGAATGTCGT 58.458 40.909 0.00 0.00 0.00 4.34
22 23 4.152402 CCTACCAACAACTGAAGAATGTCG 59.848 45.833 0.00 0.00 0.00 4.35
23 24 5.063880 ACCTACCAACAACTGAAGAATGTC 58.936 41.667 0.00 0.00 0.00 3.06
24 25 5.048846 ACCTACCAACAACTGAAGAATGT 57.951 39.130 0.00 0.00 0.00 2.71
25 26 4.455877 GGACCTACCAACAACTGAAGAATG 59.544 45.833 0.00 0.00 38.79 2.67
26 27 4.351111 AGGACCTACCAACAACTGAAGAAT 59.649 41.667 0.00 0.00 42.04 2.40
27 28 3.714798 AGGACCTACCAACAACTGAAGAA 59.285 43.478 0.00 0.00 42.04 2.52
28 29 3.314693 AGGACCTACCAACAACTGAAGA 58.685 45.455 0.00 0.00 42.04 2.87
29 30 3.665190 GAGGACCTACCAACAACTGAAG 58.335 50.000 0.00 0.00 42.04 3.02
30 31 2.036733 CGAGGACCTACCAACAACTGAA 59.963 50.000 0.00 0.00 42.04 3.02
31 32 1.616865 CGAGGACCTACCAACAACTGA 59.383 52.381 0.00 0.00 42.04 3.41
32 33 1.337823 CCGAGGACCTACCAACAACTG 60.338 57.143 0.00 0.00 42.04 3.16
33 34 0.974383 CCGAGGACCTACCAACAACT 59.026 55.000 0.00 0.00 42.04 3.16
34 35 0.672711 GCCGAGGACCTACCAACAAC 60.673 60.000 0.00 0.00 42.04 3.32
35 36 1.675219 GCCGAGGACCTACCAACAA 59.325 57.895 0.00 0.00 42.04 2.83
36 37 2.288025 GGCCGAGGACCTACCAACA 61.288 63.158 0.00 0.00 42.04 3.33
37 38 2.582978 GGCCGAGGACCTACCAAC 59.417 66.667 0.00 0.00 42.04 3.77
38 39 2.686106 GGGCCGAGGACCTACCAA 60.686 66.667 6.80 0.00 41.04 3.67
40 41 4.828296 TCGGGCCGAGGACCTACC 62.828 72.222 27.46 0.00 42.41 3.18
41 42 3.525545 GTCGGGCCGAGGACCTAC 61.526 72.222 31.98 12.88 42.41 3.18
48 49 3.106986 ATTCATGGGTCGGGCCGAG 62.107 63.158 31.98 17.75 36.23 4.63
49 50 3.087253 ATTCATGGGTCGGGCCGA 61.087 61.111 27.46 27.46 38.44 5.54
50 51 2.901840 CATTCATGGGTCGGGCCG 60.902 66.667 22.51 22.51 38.44 6.13
51 52 2.519302 CCATTCATGGGTCGGGCC 60.519 66.667 0.00 0.00 44.31 5.80
60 61 3.585990 GTCGGCCCGCCATTCATG 61.586 66.667 6.52 0.00 35.37 3.07
81 82 0.394352 CTGGATTAGGGGGTGCACAC 60.394 60.000 20.43 16.45 0.00 3.82
82 83 1.570857 CCTGGATTAGGGGGTGCACA 61.571 60.000 20.43 0.00 43.33 4.57
83 84 1.227383 CCTGGATTAGGGGGTGCAC 59.773 63.158 8.80 8.80 43.33 4.57
84 85 3.754043 CCTGGATTAGGGGGTGCA 58.246 61.111 0.00 0.00 43.33 4.57
92 93 2.224066 GGGTGACGATGTCCTGGATTAG 60.224 54.545 0.00 0.00 0.00 1.73
93 94 1.760613 GGGTGACGATGTCCTGGATTA 59.239 52.381 0.00 0.00 0.00 1.75
94 95 0.541863 GGGTGACGATGTCCTGGATT 59.458 55.000 0.00 0.00 0.00 3.01
95 96 2.212327 GGGTGACGATGTCCTGGAT 58.788 57.895 0.00 0.00 0.00 3.41
96 97 3.708210 GGGTGACGATGTCCTGGA 58.292 61.111 0.00 0.00 0.00 3.86
117 118 2.783288 GGGATCCGTCGAGGTGGTC 61.783 68.421 5.45 1.79 41.99 4.02
118 119 2.758737 GGGATCCGTCGAGGTGGT 60.759 66.667 5.45 0.00 41.99 4.16
119 120 2.355986 TTGGGATCCGTCGAGGTGG 61.356 63.158 5.45 0.00 41.99 4.61
120 121 1.153628 GTTGGGATCCGTCGAGGTG 60.154 63.158 5.45 0.00 41.99 4.00
121 122 1.189524 TTGTTGGGATCCGTCGAGGT 61.190 55.000 5.45 0.00 41.99 3.85
122 123 0.036765 TTTGTTGGGATCCGTCGAGG 60.037 55.000 5.45 0.00 42.97 4.63
123 124 1.337823 ACTTTGTTGGGATCCGTCGAG 60.338 52.381 5.45 1.55 0.00 4.04
124 125 0.682852 ACTTTGTTGGGATCCGTCGA 59.317 50.000 5.45 0.00 0.00 4.20
125 126 1.076332 GACTTTGTTGGGATCCGTCG 58.924 55.000 5.45 0.00 0.00 5.12
126 127 1.450025 GGACTTTGTTGGGATCCGTC 58.550 55.000 5.45 5.43 0.00 4.79
127 128 0.321298 CGGACTTTGTTGGGATCCGT 60.321 55.000 5.45 0.00 45.73 4.69
128 129 2.466867 CGGACTTTGTTGGGATCCG 58.533 57.895 5.45 0.00 45.61 4.18
129 130 1.313091 GGCGGACTTTGTTGGGATCC 61.313 60.000 1.92 1.92 0.00 3.36
130 131 1.313091 GGGCGGACTTTGTTGGGATC 61.313 60.000 0.00 0.00 0.00 3.36
131 132 1.304134 GGGCGGACTTTGTTGGGAT 60.304 57.895 0.00 0.00 0.00 3.85
132 133 2.114411 GGGCGGACTTTGTTGGGA 59.886 61.111 0.00 0.00 0.00 4.37
133 134 2.203422 TGGGCGGACTTTGTTGGG 60.203 61.111 0.00 0.00 0.00 4.12
134 135 1.528309 AGTGGGCGGACTTTGTTGG 60.528 57.895 0.00 0.00 0.00 3.77
135 136 0.817634 TCAGTGGGCGGACTTTGTTG 60.818 55.000 0.00 0.00 0.00 3.33
136 137 0.535102 CTCAGTGGGCGGACTTTGTT 60.535 55.000 0.00 0.00 0.00 2.83
137 138 1.071471 CTCAGTGGGCGGACTTTGT 59.929 57.895 0.00 0.00 0.00 2.83
138 139 1.672356 CCTCAGTGGGCGGACTTTG 60.672 63.158 0.00 0.00 0.00 2.77
139 140 1.841556 TCCTCAGTGGGCGGACTTT 60.842 57.895 0.00 0.00 36.20 2.66
140 141 2.203788 TCCTCAGTGGGCGGACTT 60.204 61.111 0.00 0.00 36.20 3.01
141 142 2.997897 GTCCTCAGTGGGCGGACT 60.998 66.667 15.52 0.00 42.99 3.85
142 143 4.083862 GGTCCTCAGTGGGCGGAC 62.084 72.222 14.84 14.84 42.62 4.79
143 144 4.316823 AGGTCCTCAGTGGGCGGA 62.317 66.667 0.00 0.00 42.62 5.54
144 145 3.775654 GAGGTCCTCAGTGGGCGG 61.776 72.222 14.46 0.00 42.62 6.13
145 146 4.135153 CGAGGTCCTCAGTGGGCG 62.135 72.222 19.15 0.00 42.62 6.13
146 147 2.060980 ATCGAGGTCCTCAGTGGGC 61.061 63.158 19.15 0.00 40.45 5.36
147 148 1.680522 CCATCGAGGTCCTCAGTGGG 61.681 65.000 23.26 13.84 33.69 4.61
148 149 1.680522 CCCATCGAGGTCCTCAGTGG 61.681 65.000 23.73 23.73 35.66 4.00
149 150 1.680522 CCCCATCGAGGTCCTCAGTG 61.681 65.000 19.15 15.00 34.66 3.66
150 151 1.381872 CCCCATCGAGGTCCTCAGT 60.382 63.158 19.15 3.48 34.66 3.41
151 152 1.075970 TCCCCATCGAGGTCCTCAG 60.076 63.158 19.15 11.37 34.66 3.35
152 153 1.381327 GTCCCCATCGAGGTCCTCA 60.381 63.158 19.15 6.59 34.66 3.86
153 154 1.381327 TGTCCCCATCGAGGTCCTC 60.381 63.158 9.05 9.05 34.66 3.71
154 155 1.381872 CTGTCCCCATCGAGGTCCT 60.382 63.158 0.00 0.00 34.66 3.85
155 156 3.095347 GCTGTCCCCATCGAGGTCC 62.095 68.421 0.00 0.00 34.66 4.46
156 157 2.501610 GCTGTCCCCATCGAGGTC 59.498 66.667 0.00 0.00 34.66 3.85
157 158 3.461773 CGCTGTCCCCATCGAGGT 61.462 66.667 0.00 0.00 32.09 3.85
158 159 3.432051 GACGCTGTCCCCATCGAGG 62.432 68.421 0.00 0.00 34.45 4.63
159 160 2.105128 GACGCTGTCCCCATCGAG 59.895 66.667 0.00 0.00 34.45 4.04
160 161 3.822192 CGACGCTGTCCCCATCGA 61.822 66.667 0.00 0.00 34.45 3.59
161 162 4.873129 CCGACGCTGTCCCCATCG 62.873 72.222 0.00 0.00 36.33 3.84
179 180 2.317609 CGGGAAGAGGTGTGCAACG 61.318 63.158 0.00 0.00 42.39 4.10
180 181 2.617274 GCGGGAAGAGGTGTGCAAC 61.617 63.158 0.00 0.00 37.35 4.17
181 182 2.281484 GCGGGAAGAGGTGTGCAA 60.281 61.111 0.00 0.00 0.00 4.08
182 183 4.680237 CGCGGGAAGAGGTGTGCA 62.680 66.667 0.00 0.00 0.00 4.57
186 187 4.821589 GAGGCGCGGGAAGAGGTG 62.822 72.222 8.83 0.00 0.00 4.00
220 221 1.099295 GGTGGTTGGCGGTATAAGGC 61.099 60.000 0.00 0.00 0.00 4.35
221 222 0.544697 AGGTGGTTGGCGGTATAAGG 59.455 55.000 0.00 0.00 0.00 2.69
222 223 1.663695 CAGGTGGTTGGCGGTATAAG 58.336 55.000 0.00 0.00 0.00 1.73
223 224 0.253610 CCAGGTGGTTGGCGGTATAA 59.746 55.000 0.00 0.00 0.00 0.98
224 225 1.909228 CCAGGTGGTTGGCGGTATA 59.091 57.895 0.00 0.00 0.00 1.47
225 226 2.674754 CCAGGTGGTTGGCGGTAT 59.325 61.111 0.00 0.00 0.00 2.73
236 237 3.190738 TTCCCTTCCGCACCAGGTG 62.191 63.158 16.16 16.16 36.51 4.00
237 238 2.852075 TTCCCTTCCGCACCAGGT 60.852 61.111 0.00 0.00 0.00 4.00
238 239 2.359975 GTTCCCTTCCGCACCAGG 60.360 66.667 0.00 0.00 0.00 4.45
239 240 2.742372 CGTTCCCTTCCGCACCAG 60.742 66.667 0.00 0.00 0.00 4.00
240 241 3.234630 CTCGTTCCCTTCCGCACCA 62.235 63.158 0.00 0.00 0.00 4.17
241 242 2.434359 CTCGTTCCCTTCCGCACC 60.434 66.667 0.00 0.00 0.00 5.01
242 243 1.446272 CTCTCGTTCCCTTCCGCAC 60.446 63.158 0.00 0.00 0.00 5.34
243 244 1.595993 CTCTCTCGTTCCCTTCCGCA 61.596 60.000 0.00 0.00 0.00 5.69
244 245 1.139947 CTCTCTCGTTCCCTTCCGC 59.860 63.158 0.00 0.00 0.00 5.54
245 246 0.171455 CACTCTCTCGTTCCCTTCCG 59.829 60.000 0.00 0.00 0.00 4.30
246 247 1.067495 CACACTCTCTCGTTCCCTTCC 60.067 57.143 0.00 0.00 0.00 3.46
247 248 1.067495 CCACACTCTCTCGTTCCCTTC 60.067 57.143 0.00 0.00 0.00 3.46
248 249 0.969894 CCACACTCTCTCGTTCCCTT 59.030 55.000 0.00 0.00 0.00 3.95
249 250 0.112606 TCCACACTCTCTCGTTCCCT 59.887 55.000 0.00 0.00 0.00 4.20
250 251 0.244178 GTCCACACTCTCTCGTTCCC 59.756 60.000 0.00 0.00 0.00 3.97
251 252 0.109689 CGTCCACACTCTCTCGTTCC 60.110 60.000 0.00 0.00 0.00 3.62
252 253 0.109689 CCGTCCACACTCTCTCGTTC 60.110 60.000 0.00 0.00 0.00 3.95
253 254 1.524863 CCCGTCCACACTCTCTCGTT 61.525 60.000 0.00 0.00 0.00 3.85
254 255 1.972223 CCCGTCCACACTCTCTCGT 60.972 63.158 0.00 0.00 0.00 4.18
255 256 2.701780 CCCCGTCCACACTCTCTCG 61.702 68.421 0.00 0.00 0.00 4.04
256 257 0.898789 TTCCCCGTCCACACTCTCTC 60.899 60.000 0.00 0.00 0.00 3.20
257 258 0.252284 ATTCCCCGTCCACACTCTCT 60.252 55.000 0.00 0.00 0.00 3.10
258 259 0.175989 GATTCCCCGTCCACACTCTC 59.824 60.000 0.00 0.00 0.00 3.20
259 260 1.605058 CGATTCCCCGTCCACACTCT 61.605 60.000 0.00 0.00 0.00 3.24
260 261 1.153628 CGATTCCCCGTCCACACTC 60.154 63.158 0.00 0.00 0.00 3.51
261 262 1.608336 TCGATTCCCCGTCCACACT 60.608 57.895 0.00 0.00 0.00 3.55
262 263 1.447314 GTCGATTCCCCGTCCACAC 60.447 63.158 0.00 0.00 0.00 3.82
263 264 2.652095 GGTCGATTCCCCGTCCACA 61.652 63.158 0.00 0.00 37.61 4.17
264 265 2.186125 GGTCGATTCCCCGTCCAC 59.814 66.667 0.00 0.00 37.61 4.02
265 266 3.454573 CGGTCGATTCCCCGTCCA 61.455 66.667 4.14 0.00 39.38 4.02
266 267 3.135056 CTCGGTCGATTCCCCGTCC 62.135 68.421 11.42 0.00 44.51 4.79
267 268 2.412112 CTCGGTCGATTCCCCGTC 59.588 66.667 11.42 0.00 44.51 4.79
268 269 3.834799 GCTCGGTCGATTCCCCGT 61.835 66.667 11.42 0.00 44.51 5.28
269 270 3.528370 AGCTCGGTCGATTCCCCG 61.528 66.667 5.87 5.87 45.55 5.73
270 271 2.107141 CAGCTCGGTCGATTCCCC 59.893 66.667 0.00 0.00 0.00 4.81
271 272 2.107141 CCAGCTCGGTCGATTCCC 59.893 66.667 0.00 0.00 0.00 3.97
280 281 4.087892 CTCACCCCACCAGCTCGG 62.088 72.222 1.16 1.16 42.50 4.63
281 282 2.997315 TCTCACCCCACCAGCTCG 60.997 66.667 0.00 0.00 0.00 5.03
282 283 2.664081 CCTCTCACCCCACCAGCTC 61.664 68.421 0.00 0.00 0.00 4.09
283 284 2.608988 CCTCTCACCCCACCAGCT 60.609 66.667 0.00 0.00 0.00 4.24
284 285 3.721706 CCCTCTCACCCCACCAGC 61.722 72.222 0.00 0.00 0.00 4.85
285 286 3.721706 GCCCTCTCACCCCACCAG 61.722 72.222 0.00 0.00 0.00 4.00
286 287 4.590553 TGCCCTCTCACCCCACCA 62.591 66.667 0.00 0.00 0.00 4.17
287 288 4.035102 GTGCCCTCTCACCCCACC 62.035 72.222 0.00 0.00 0.00 4.61
288 289 2.470938 GAAGTGCCCTCTCACCCCAC 62.471 65.000 0.00 0.00 37.68 4.61
289 290 2.121963 AAGTGCCCTCTCACCCCA 60.122 61.111 0.00 0.00 37.68 4.96
290 291 2.190488 CTGAAGTGCCCTCTCACCCC 62.190 65.000 0.00 0.00 37.68 4.95
291 292 1.298014 CTGAAGTGCCCTCTCACCC 59.702 63.158 0.00 0.00 37.68 4.61
292 293 1.376553 GCTGAAGTGCCCTCTCACC 60.377 63.158 0.00 0.00 37.68 4.02
293 294 1.739562 CGCTGAAGTGCCCTCTCAC 60.740 63.158 0.00 0.00 37.24 3.51
294 295 2.659016 CGCTGAAGTGCCCTCTCA 59.341 61.111 0.00 0.00 0.00 3.27
295 296 2.817396 GCGCTGAAGTGCCCTCTC 60.817 66.667 0.00 0.00 45.15 3.20
302 303 4.988598 ACGTGGGGCGCTGAAGTG 62.989 66.667 7.64 0.00 46.11 3.16
303 304 4.250305 AACGTGGGGCGCTGAAGT 62.250 61.111 7.64 0.00 46.11 3.01
304 305 3.423154 GAACGTGGGGCGCTGAAG 61.423 66.667 7.64 0.00 46.11 3.02
318 319 1.653920 CGAGTGAGAACGACGCGAAC 61.654 60.000 15.93 5.44 38.71 3.95
319 320 1.439858 CGAGTGAGAACGACGCGAA 60.440 57.895 15.93 0.00 38.71 4.70
320 321 2.172659 CGAGTGAGAACGACGCGA 59.827 61.111 15.93 0.00 38.71 5.87
321 322 2.775359 TTCCGAGTGAGAACGACGCG 62.775 60.000 3.53 3.53 36.52 6.01
322 323 1.081641 TTCCGAGTGAGAACGACGC 60.082 57.895 0.00 0.00 0.00 5.19
323 324 2.709631 GTTCCGAGTGAGAACGACG 58.290 57.895 0.00 0.00 34.76 5.12
327 328 1.993370 CCATTCGTTCCGAGTGAGAAC 59.007 52.381 10.20 0.00 44.29 3.01
328 329 1.671850 GCCATTCGTTCCGAGTGAGAA 60.672 52.381 10.20 0.00 44.29 2.87
329 330 0.108804 GCCATTCGTTCCGAGTGAGA 60.109 55.000 10.20 0.00 44.29 3.27
330 331 1.084370 GGCCATTCGTTCCGAGTGAG 61.084 60.000 10.20 2.97 44.29 3.51
331 332 1.079405 GGCCATTCGTTCCGAGTGA 60.079 57.895 10.20 0.00 44.29 3.41
332 333 2.452813 CGGCCATTCGTTCCGAGTG 61.453 63.158 2.24 2.60 45.53 3.51
333 334 2.125673 CGGCCATTCGTTCCGAGT 60.126 61.111 2.24 0.00 45.53 4.18
334 335 2.890474 CCGGCCATTCGTTCCGAG 60.890 66.667 2.24 0.00 45.53 4.63
335 336 3.652539 GACCGGCCATTCGTTCCGA 62.653 63.158 0.00 0.00 45.53 4.55
336 337 3.192922 GACCGGCCATTCGTTCCG 61.193 66.667 0.00 0.00 42.58 4.30
337 338 3.192922 CGACCGGCCATTCGTTCC 61.193 66.667 13.65 0.00 0.00 3.62
338 339 2.125832 TCGACCGGCCATTCGTTC 60.126 61.111 19.53 0.00 36.60 3.95
339 340 2.433664 GTCGACCGGCCATTCGTT 60.434 61.111 19.53 0.00 36.60 3.85
340 341 4.789075 CGTCGACCGGCCATTCGT 62.789 66.667 19.53 2.39 36.60 3.85
359 360 2.578713 AAGTCGTATGCCGCGTCG 60.579 61.111 4.92 1.93 36.19 5.12
360 361 2.995482 CAAGTCGTATGCCGCGTC 59.005 61.111 4.92 0.00 36.19 5.19
361 362 3.186047 GCAAGTCGTATGCCGCGT 61.186 61.111 4.92 0.00 37.85 6.01
362 363 4.265630 CGCAAGTCGTATGCCGCG 62.266 66.667 0.00 0.00 40.72 6.46
363 364 4.575245 GCGCAAGTCGTATGCCGC 62.575 66.667 0.30 0.00 40.72 6.53
364 365 1.143373 TTAGCGCAAGTCGTATGCCG 61.143 55.000 11.47 0.00 40.72 5.69
365 366 0.577269 CTTAGCGCAAGTCGTATGCC 59.423 55.000 11.47 0.00 40.72 4.40
366 367 1.556564 TCTTAGCGCAAGTCGTATGC 58.443 50.000 11.47 0.00 41.07 3.14
367 368 2.726760 GGATCTTAGCGCAAGTCGTATG 59.273 50.000 11.47 0.00 41.07 2.39
368 369 2.604855 CGGATCTTAGCGCAAGTCGTAT 60.605 50.000 11.47 0.95 41.07 3.06
369 370 1.268386 CGGATCTTAGCGCAAGTCGTA 60.268 52.381 11.47 0.00 41.07 3.43
370 371 0.525668 CGGATCTTAGCGCAAGTCGT 60.526 55.000 11.47 2.87 41.07 4.34
371 372 0.525668 ACGGATCTTAGCGCAAGTCG 60.526 55.000 11.47 16.88 42.12 4.18
372 373 0.924090 CACGGATCTTAGCGCAAGTC 59.076 55.000 11.47 10.82 41.68 3.01
373 374 1.084370 GCACGGATCTTAGCGCAAGT 61.084 55.000 11.47 2.64 41.68 3.16
374 375 1.638467 GCACGGATCTTAGCGCAAG 59.362 57.895 11.47 11.67 35.38 4.01
375 376 1.813753 GGCACGGATCTTAGCGCAA 60.814 57.895 11.47 0.50 0.00 4.85
376 377 2.202878 GGCACGGATCTTAGCGCA 60.203 61.111 11.47 0.00 0.00 6.09
389 390 2.258286 GTTGGATTGTGGCGGCAC 59.742 61.111 33.07 33.07 0.00 5.01
390 391 3.361158 CGTTGGATTGTGGCGGCA 61.361 61.111 7.97 7.97 0.00 5.69
391 392 4.114997 CCGTTGGATTGTGGCGGC 62.115 66.667 0.00 0.00 35.90 6.53
392 393 2.195123 GAACCGTTGGATTGTGGCGG 62.195 60.000 0.00 0.00 46.83 6.13
393 394 1.209127 GAACCGTTGGATTGTGGCG 59.791 57.895 0.00 0.00 0.00 5.69
394 395 1.816074 TAGAACCGTTGGATTGTGGC 58.184 50.000 0.00 0.00 0.00 5.01
395 396 2.158841 CGTTAGAACCGTTGGATTGTGG 59.841 50.000 0.00 0.00 0.00 4.17
396 397 2.803956 ACGTTAGAACCGTTGGATTGTG 59.196 45.455 0.00 0.00 34.28 3.33
397 398 3.116079 ACGTTAGAACCGTTGGATTGT 57.884 42.857 0.00 0.00 34.28 2.71
398 399 4.240096 ACTACGTTAGAACCGTTGGATTG 58.760 43.478 0.00 0.00 39.60 2.67
399 400 4.525912 ACTACGTTAGAACCGTTGGATT 57.474 40.909 0.00 0.00 39.60 3.01
400 401 4.488879 GAACTACGTTAGAACCGTTGGAT 58.511 43.478 0.00 0.00 39.60 3.41
401 402 3.609175 CGAACTACGTTAGAACCGTTGGA 60.609 47.826 0.00 0.00 39.60 3.53
402 403 2.658325 CGAACTACGTTAGAACCGTTGG 59.342 50.000 0.00 0.00 39.60 3.77
403 404 2.089581 GCGAACTACGTTAGAACCGTTG 59.910 50.000 0.00 0.00 44.60 4.10
404 405 2.030805 AGCGAACTACGTTAGAACCGTT 60.031 45.455 0.00 0.00 44.60 4.44
405 406 1.537202 AGCGAACTACGTTAGAACCGT 59.463 47.619 0.00 0.00 44.60 4.83
406 407 1.909532 CAGCGAACTACGTTAGAACCG 59.090 52.381 0.00 0.00 44.60 4.44
407 408 2.257034 CCAGCGAACTACGTTAGAACC 58.743 52.381 0.00 0.00 44.60 3.62
408 409 2.095059 TCCCAGCGAACTACGTTAGAAC 60.095 50.000 0.00 0.00 44.60 3.01
409 410 2.161855 TCCCAGCGAACTACGTTAGAA 58.838 47.619 0.00 0.00 44.60 2.10
410 411 1.825090 TCCCAGCGAACTACGTTAGA 58.175 50.000 0.00 0.00 44.60 2.10
411 412 2.642139 TTCCCAGCGAACTACGTTAG 57.358 50.000 0.00 0.00 44.60 2.34
412 413 3.059166 GTTTTCCCAGCGAACTACGTTA 58.941 45.455 0.00 0.00 44.60 3.18
413 414 1.869132 GTTTTCCCAGCGAACTACGTT 59.131 47.619 0.00 0.00 44.60 3.99
414 415 1.505425 GTTTTCCCAGCGAACTACGT 58.495 50.000 0.00 0.00 44.60 3.57
415 416 0.437295 CGTTTTCCCAGCGAACTACG 59.563 55.000 0.00 0.00 45.66 3.51
416 417 1.458445 GACGTTTTCCCAGCGAACTAC 59.542 52.381 0.00 0.00 0.00 2.73
417 418 1.606224 GGACGTTTTCCCAGCGAACTA 60.606 52.381 0.00 0.00 38.70 2.24
418 419 0.883370 GGACGTTTTCCCAGCGAACT 60.883 55.000 0.00 0.00 38.70 3.01
419 420 1.572941 GGACGTTTTCCCAGCGAAC 59.427 57.895 0.00 0.00 38.70 3.95
420 421 4.052519 GGACGTTTTCCCAGCGAA 57.947 55.556 0.00 0.00 38.70 4.70
445 446 1.664151 GAAATCTTAACTGGCCGACGG 59.336 52.381 10.29 10.29 0.00 4.79
446 447 1.664151 GGAAATCTTAACTGGCCGACG 59.336 52.381 0.00 0.00 0.00 5.12
447 448 2.014857 GGGAAATCTTAACTGGCCGAC 58.985 52.381 0.00 0.00 0.00 4.79
448 449 1.913419 AGGGAAATCTTAACTGGCCGA 59.087 47.619 0.00 0.00 0.00 5.54
449 450 2.420058 AGGGAAATCTTAACTGGCCG 57.580 50.000 0.00 0.00 0.00 6.13
450 451 3.969553 AGAAGGGAAATCTTAACTGGCC 58.030 45.455 0.00 0.00 0.00 5.36
451 452 5.984695 AAAGAAGGGAAATCTTAACTGGC 57.015 39.130 0.00 0.00 36.14 4.85
452 453 7.394641 AGCTAAAAGAAGGGAAATCTTAACTGG 59.605 37.037 0.00 0.00 36.14 4.00
453 454 8.341892 AGCTAAAAGAAGGGAAATCTTAACTG 57.658 34.615 0.00 0.00 36.14 3.16
454 455 8.387039 AGAGCTAAAAGAAGGGAAATCTTAACT 58.613 33.333 0.00 0.00 36.14 2.24
455 456 8.454894 CAGAGCTAAAAGAAGGGAAATCTTAAC 58.545 37.037 0.00 0.00 36.14 2.01
456 457 7.121315 GCAGAGCTAAAAGAAGGGAAATCTTAA 59.879 37.037 0.00 0.00 36.14 1.85
457 458 6.599638 GCAGAGCTAAAAGAAGGGAAATCTTA 59.400 38.462 0.00 0.00 36.14 2.10
458 459 5.417266 GCAGAGCTAAAAGAAGGGAAATCTT 59.583 40.000 0.00 0.00 38.75 2.40
459 460 4.946772 GCAGAGCTAAAAGAAGGGAAATCT 59.053 41.667 0.00 0.00 0.00 2.40
460 461 4.201861 CGCAGAGCTAAAAGAAGGGAAATC 60.202 45.833 0.00 0.00 0.00 2.17
461 462 3.691609 CGCAGAGCTAAAAGAAGGGAAAT 59.308 43.478 0.00 0.00 0.00 2.17
462 463 3.074412 CGCAGAGCTAAAAGAAGGGAAA 58.926 45.455 0.00 0.00 0.00 3.13
463 464 2.038557 ACGCAGAGCTAAAAGAAGGGAA 59.961 45.455 0.00 0.00 0.00 3.97
464 465 1.623811 ACGCAGAGCTAAAAGAAGGGA 59.376 47.619 0.00 0.00 0.00 4.20
465 466 2.100605 ACGCAGAGCTAAAAGAAGGG 57.899 50.000 0.00 0.00 0.00 3.95
466 467 4.436183 GCTAAACGCAGAGCTAAAAGAAGG 60.436 45.833 0.00 0.00 38.92 3.46
467 468 4.152402 TGCTAAACGCAGAGCTAAAAGAAG 59.848 41.667 4.87 0.00 45.47 2.85
468 469 4.062293 TGCTAAACGCAGAGCTAAAAGAA 58.938 39.130 4.87 0.00 45.47 2.52
469 470 3.659786 TGCTAAACGCAGAGCTAAAAGA 58.340 40.909 4.87 0.00 45.47 2.52
477 478 5.438401 ACGGAGTATTTGCTAAACGCAGAG 61.438 45.833 0.00 0.00 46.63 3.35
478 479 3.615592 ACGGAGTATTTGCTAAACGCAGA 60.616 43.478 0.00 0.00 46.63 4.26
479 480 2.671396 ACGGAGTATTTGCTAAACGCAG 59.329 45.455 0.00 0.00 46.63 5.18
480 481 2.690786 ACGGAGTATTTGCTAAACGCA 58.309 42.857 0.00 0.00 44.82 5.24
493 494 7.168219 TCTACCTTTTTGTCTAGTACGGAGTA 58.832 38.462 0.00 0.00 45.11 2.59
495 496 6.404513 CCTCTACCTTTTTGTCTAGTACGGAG 60.405 46.154 0.00 0.00 0.00 4.63
496 497 5.416952 CCTCTACCTTTTTGTCTAGTACGGA 59.583 44.000 0.00 0.00 0.00 4.69
497 498 5.393896 CCCTCTACCTTTTTGTCTAGTACGG 60.394 48.000 0.00 0.00 0.00 4.02
498 499 5.416952 TCCCTCTACCTTTTTGTCTAGTACG 59.583 44.000 0.00 0.00 0.00 3.67
499 500 6.847421 TCCCTCTACCTTTTTGTCTAGTAC 57.153 41.667 0.00 0.00 0.00 2.73
500 501 7.015064 ACTTCCCTCTACCTTTTTGTCTAGTA 58.985 38.462 0.00 0.00 0.00 1.82
501 502 5.845065 ACTTCCCTCTACCTTTTTGTCTAGT 59.155 40.000 0.00 0.00 0.00 2.57
502 503 6.361768 ACTTCCCTCTACCTTTTTGTCTAG 57.638 41.667 0.00 0.00 0.00 2.43
503 504 6.328148 TGAACTTCCCTCTACCTTTTTGTCTA 59.672 38.462 0.00 0.00 0.00 2.59
504 505 5.132144 TGAACTTCCCTCTACCTTTTTGTCT 59.868 40.000 0.00 0.00 0.00 3.41
505 506 5.238868 GTGAACTTCCCTCTACCTTTTTGTC 59.761 44.000 0.00 0.00 0.00 3.18
506 507 5.131067 GTGAACTTCCCTCTACCTTTTTGT 58.869 41.667 0.00 0.00 0.00 2.83
507 508 5.130350 TGTGAACTTCCCTCTACCTTTTTG 58.870 41.667 0.00 0.00 0.00 2.44
508 509 5.382664 TGTGAACTTCCCTCTACCTTTTT 57.617 39.130 0.00 0.00 0.00 1.94
509 510 5.377478 CTTGTGAACTTCCCTCTACCTTTT 58.623 41.667 0.00 0.00 0.00 2.27
510 511 4.747009 GCTTGTGAACTTCCCTCTACCTTT 60.747 45.833 0.00 0.00 0.00 3.11
511 512 3.244596 GCTTGTGAACTTCCCTCTACCTT 60.245 47.826 0.00 0.00 0.00 3.50
512 513 2.303311 GCTTGTGAACTTCCCTCTACCT 59.697 50.000 0.00 0.00 0.00 3.08
513 514 2.038557 TGCTTGTGAACTTCCCTCTACC 59.961 50.000 0.00 0.00 0.00 3.18
514 515 3.006967 TCTGCTTGTGAACTTCCCTCTAC 59.993 47.826 0.00 0.00 0.00 2.59
515 516 3.239449 TCTGCTTGTGAACTTCCCTCTA 58.761 45.455 0.00 0.00 0.00 2.43
516 517 2.038295 CTCTGCTTGTGAACTTCCCTCT 59.962 50.000 0.00 0.00 0.00 3.69
517 518 2.421619 CTCTGCTTGTGAACTTCCCTC 58.578 52.381 0.00 0.00 0.00 4.30
518 519 1.544314 GCTCTGCTTGTGAACTTCCCT 60.544 52.381 0.00 0.00 0.00 4.20
519 520 0.877743 GCTCTGCTTGTGAACTTCCC 59.122 55.000 0.00 0.00 0.00 3.97
520 521 0.877743 GGCTCTGCTTGTGAACTTCC 59.122 55.000 0.00 0.00 0.00 3.46
521 522 0.514691 CGGCTCTGCTTGTGAACTTC 59.485 55.000 0.00 0.00 0.00 3.01
522 523 0.179045 ACGGCTCTGCTTGTGAACTT 60.179 50.000 0.00 0.00 0.00 2.66
523 524 0.601311 GACGGCTCTGCTTGTGAACT 60.601 55.000 0.00 0.00 0.00 3.01
524 525 1.862806 GACGGCTCTGCTTGTGAAC 59.137 57.895 0.00 0.00 0.00 3.18
525 526 1.664649 CGACGGCTCTGCTTGTGAA 60.665 57.895 0.00 0.00 0.00 3.18
526 527 2.049156 CGACGGCTCTGCTTGTGA 60.049 61.111 0.00 0.00 0.00 3.58
618 623 0.392706 CGACGGATGGATGGATGGAA 59.607 55.000 0.00 0.00 0.00 3.53
627 632 3.535280 TTTGATTGATCGACGGATGGA 57.465 42.857 0.00 0.00 31.51 3.41
629 634 4.031028 GCTTTTTGATTGATCGACGGATG 58.969 43.478 0.00 0.00 31.51 3.51
631 636 3.070748 TGCTTTTTGATTGATCGACGGA 58.929 40.909 0.00 0.00 0.00 4.69
632 637 3.469899 TGCTTTTTGATTGATCGACGG 57.530 42.857 0.00 0.00 0.00 4.79
633 638 4.201428 GCTTTGCTTTTTGATTGATCGACG 60.201 41.667 0.00 0.00 0.00 5.12
634 639 4.919754 AGCTTTGCTTTTTGATTGATCGAC 59.080 37.500 0.00 0.00 33.89 4.20
747 752 1.741770 GACTGCCACGCTTACCCTG 60.742 63.158 0.00 0.00 0.00 4.45
749 754 2.813908 CGACTGCCACGCTTACCC 60.814 66.667 0.00 0.00 0.00 3.69
750 755 2.092882 GTCGACTGCCACGCTTACC 61.093 63.158 8.70 0.00 0.00 2.85
751 756 2.092882 GGTCGACTGCCACGCTTAC 61.093 63.158 16.46 0.00 0.00 2.34
752 757 2.260434 GGTCGACTGCCACGCTTA 59.740 61.111 16.46 0.00 0.00 3.09
753 758 3.865929 CTGGTCGACTGCCACGCTT 62.866 63.158 16.46 0.00 31.85 4.68
782 787 2.129146 CCCTCGGCGTATGGGTGTA 61.129 63.158 20.79 0.00 36.32 2.90
857 864 3.434453 CCACTAGTAGAGTAGAGCCAGCT 60.434 52.174 3.59 0.00 35.64 4.24
859 866 3.880490 CACCACTAGTAGAGTAGAGCCAG 59.120 52.174 3.59 0.00 35.64 4.85
860 867 3.371702 CCACCACTAGTAGAGTAGAGCCA 60.372 52.174 3.59 0.00 35.64 4.75
861 868 3.215975 CCACCACTAGTAGAGTAGAGCC 58.784 54.545 3.59 0.00 35.64 4.70
862 869 3.628487 CACCACCACTAGTAGAGTAGAGC 59.372 52.174 3.59 0.00 35.64 4.09
863 870 4.080469 TCCACCACCACTAGTAGAGTAGAG 60.080 50.000 3.59 0.00 35.64 2.43
864 871 3.848377 TCCACCACCACTAGTAGAGTAGA 59.152 47.826 3.59 0.00 35.64 2.59
865 872 3.946558 GTCCACCACCACTAGTAGAGTAG 59.053 52.174 3.59 0.00 35.64 2.57
866 873 3.620719 CGTCCACCACCACTAGTAGAGTA 60.621 52.174 3.59 0.00 35.64 2.59
867 874 2.805194 GTCCACCACCACTAGTAGAGT 58.195 52.381 3.59 0.00 39.82 3.24
868 875 1.743958 CGTCCACCACCACTAGTAGAG 59.256 57.143 3.59 0.00 0.00 2.43
869 876 1.615116 CCGTCCACCACCACTAGTAGA 60.615 57.143 3.59 0.00 0.00 2.59
870 877 0.815734 CCGTCCACCACCACTAGTAG 59.184 60.000 0.00 0.00 0.00 2.57
871 878 1.252904 GCCGTCCACCACCACTAGTA 61.253 60.000 0.00 0.00 0.00 1.82
872 879 2.580601 GCCGTCCACCACCACTAGT 61.581 63.158 0.00 0.00 0.00 2.57
873 880 2.264794 GCCGTCCACCACCACTAG 59.735 66.667 0.00 0.00 0.00 2.57
874 881 3.687102 CGCCGTCCACCACCACTA 61.687 66.667 0.00 0.00 0.00 2.74
915 922 1.572689 GGAGGAGGGAGGGGGAAAAC 61.573 65.000 0.00 0.00 0.00 2.43
916 923 1.230182 GGAGGAGGGAGGGGGAAAA 60.230 63.158 0.00 0.00 0.00 2.29
942 953 2.045242 GGGAGCTTTCCCGGAACC 60.045 66.667 0.73 0.00 40.59 3.62
1016 1027 2.363018 CTGGGAGGGACAGCGAGA 60.363 66.667 0.00 0.00 0.00 4.04
1021 1032 1.306997 TTAGGGCTGGGAGGGACAG 60.307 63.158 0.00 0.00 38.95 3.51
1022 1033 1.615424 GTTAGGGCTGGGAGGGACA 60.615 63.158 0.00 0.00 0.00 4.02
1023 1034 2.376165 GGTTAGGGCTGGGAGGGAC 61.376 68.421 0.00 0.00 0.00 4.46
1024 1035 2.042261 GGTTAGGGCTGGGAGGGA 59.958 66.667 0.00 0.00 0.00 4.20
1025 1036 2.265890 TAGGGTTAGGGCTGGGAGGG 62.266 65.000 0.00 0.00 0.00 4.30
1026 1037 1.054978 GTAGGGTTAGGGCTGGGAGG 61.055 65.000 0.00 0.00 0.00 4.30
1027 1038 1.054978 GGTAGGGTTAGGGCTGGGAG 61.055 65.000 0.00 0.00 0.00 4.30
1028 1039 1.003835 GGTAGGGTTAGGGCTGGGA 59.996 63.158 0.00 0.00 0.00 4.37
1029 1040 2.076803 GGGTAGGGTTAGGGCTGGG 61.077 68.421 0.00 0.00 0.00 4.45
1030 1041 2.076803 GGGGTAGGGTTAGGGCTGG 61.077 68.421 0.00 0.00 0.00 4.85
1031 1042 1.004361 AGGGGTAGGGTTAGGGCTG 59.996 63.158 0.00 0.00 0.00 4.85
1032 1043 1.004361 CAGGGGTAGGGTTAGGGCT 59.996 63.158 0.00 0.00 0.00 5.19
1033 1044 2.753884 GCAGGGGTAGGGTTAGGGC 61.754 68.421 0.00 0.00 0.00 5.19
1034 1045 2.076803 GGCAGGGGTAGGGTTAGGG 61.077 68.421 0.00 0.00 0.00 3.53
1035 1046 1.004361 AGGCAGGGGTAGGGTTAGG 59.996 63.158 0.00 0.00 0.00 2.69
1036 1047 1.054978 GGAGGCAGGGGTAGGGTTAG 61.055 65.000 0.00 0.00 0.00 2.34
1037 1048 1.003835 GGAGGCAGGGGTAGGGTTA 59.996 63.158 0.00 0.00 0.00 2.85
1038 1049 2.286197 GGAGGCAGGGGTAGGGTT 60.286 66.667 0.00 0.00 0.00 4.11
1039 1050 4.433194 GGGAGGCAGGGGTAGGGT 62.433 72.222 0.00 0.00 0.00 4.34
1273 1422 0.935898 TCGTAGATCGCTTCCTCGAC 59.064 55.000 0.00 0.00 41.62 4.20
1281 1430 1.598183 CGCATGAAGTCGTAGATCGCT 60.598 52.381 0.00 0.00 40.67 4.93
1564 1713 4.755266 ACAGAGGGGTACATTACACATC 57.245 45.455 0.00 0.00 42.81 3.06
1569 1718 4.335594 GCAATCAACAGAGGGGTACATTAC 59.664 45.833 0.00 0.00 0.00 1.89
1576 1725 1.004044 CAGAGCAATCAACAGAGGGGT 59.996 52.381 0.00 0.00 0.00 4.95
1748 1900 1.933181 TGCAATCGATTACGGAGCAAG 59.067 47.619 15.35 0.68 37.72 4.01
1785 1937 2.286732 ATTCCCTCCAGGCCTGCT 60.287 61.111 28.39 2.02 34.51 4.24
1894 2046 0.651610 CGCGGAGAATCGAAAATGCG 60.652 55.000 0.00 0.00 38.28 4.73
1948 2100 2.933495 TGCAAAGAAGATGCTCATGC 57.067 45.000 0.00 0.00 44.14 4.06
2051 2203 2.303600 TCCACGGGCTGTAACTAAACAT 59.696 45.455 0.00 0.00 0.00 2.71
2084 2236 4.913924 GCATTAATTTTATCCAGCAGAGCG 59.086 41.667 0.00 0.00 0.00 5.03
2216 2371 3.671008 TGGAAAGCGCTAAACTACTGA 57.329 42.857 12.05 0.00 0.00 3.41
2301 2456 9.859427 CATGAGAAATAAAGTTCTAATGCCAAA 57.141 29.630 4.93 0.00 38.88 3.28
2302 2457 9.241919 TCATGAGAAATAAAGTTCTAATGCCAA 57.758 29.630 11.15 0.00 42.72 4.52
2605 2760 2.356741 GGGGCAACTATTAACAGAGGCA 60.357 50.000 6.79 0.00 0.00 4.75
2606 2761 2.298610 GGGGCAACTATTAACAGAGGC 58.701 52.381 0.00 0.00 0.00 4.70
2607 2762 2.509964 AGGGGGCAACTATTAACAGAGG 59.490 50.000 0.00 0.00 0.00 3.69
2887 3043 8.974060 AACCAACACTATTTTCTACTCTTTCA 57.026 30.769 0.00 0.00 0.00 2.69
2898 3054 9.487790 CCATCAATAACAAACCAACACTATTTT 57.512 29.630 0.00 0.00 0.00 1.82
2899 3055 8.865090 TCCATCAATAACAAACCAACACTATTT 58.135 29.630 0.00 0.00 0.00 1.40
2900 3056 8.303876 GTCCATCAATAACAAACCAACACTATT 58.696 33.333 0.00 0.00 0.00 1.73
2905 3061 6.097554 AGTTGTCCATCAATAACAAACCAACA 59.902 34.615 0.00 0.00 38.38 3.33
3186 3342 3.365969 GGCCGAACTACTTGATTTGTTGG 60.366 47.826 0.00 0.00 0.00 3.77
3376 3534 0.531974 TGTCCAGGTCAGCACGTTTC 60.532 55.000 0.00 0.00 0.00 2.78
3630 3795 5.815233 AATCTCAAGATCACGTATCCCAT 57.185 39.130 0.00 0.00 34.90 4.00
3686 3851 7.171447 TGCATAAACAACTTTACAAATGCAC 57.829 32.000 2.75 0.00 32.75 4.57
3927 4092 3.305110 GTTGGCAAATGAACTTGTACCG 58.695 45.455 0.00 0.00 0.00 4.02
4011 4176 3.120121 GCGAAATCACAACATTGCAAGAC 59.880 43.478 4.94 0.00 0.00 3.01
4053 4218 5.617751 GCACTGCAAGGGAATATTATTAGCG 60.618 44.000 0.00 0.00 43.23 4.26
4129 4294 7.652105 TGTCTCCGTATCTGTGCTTTTTATATC 59.348 37.037 0.00 0.00 0.00 1.63
4338 4522 9.690913 AGAGGATCAATTAATTCAGTCATTGAA 57.309 29.630 0.00 0.00 43.97 2.69
4714 4944 2.577059 GACTCAACCGCCCGATGA 59.423 61.111 0.00 0.00 0.00 2.92
4895 5685 8.907885 CCCTGATTTCCTAATTAAAGAAAGGAG 58.092 37.037 13.06 11.00 39.25 3.69
5066 5860 9.675464 CCTACCAGTAATACAATGGTTCTAAAA 57.325 33.333 9.22 0.00 44.98 1.52
5174 5968 9.606631 AGAACAAGTATATTGCCTCTAGAAAAG 57.393 33.333 0.00 0.00 0.00 2.27
5261 6055 1.486310 TCCCAATCATCAGAGAACCCG 59.514 52.381 0.00 0.00 0.00 5.28
5369 6163 8.806429 ATTGTGAGTGACCATACATTATTTCA 57.194 30.769 0.00 0.00 0.00 2.69
5617 6411 2.431954 AGCAGAGAATTGGGACATGG 57.568 50.000 0.00 0.00 39.30 3.66
5662 6456 4.279671 TGCCACCCATTTTGTAGTTACTTG 59.720 41.667 0.00 0.00 0.00 3.16
5665 6459 3.824443 ACTGCCACCCATTTTGTAGTTAC 59.176 43.478 0.00 0.00 0.00 2.50
5896 6701 4.044308 TCCCTAAGATGCAGGTTTCCATA 58.956 43.478 0.00 0.00 0.00 2.74
5932 6737 3.726837 ACCCCCTCTGTAATATGGACT 57.273 47.619 0.00 0.00 0.00 3.85
5950 6755 7.081976 GTGTGAACCACATCAAATTAAGTACC 58.918 38.462 2.95 0.00 46.32 3.34
6096 6902 5.405269 GCACCAACAACCAAAATCAGATTAC 59.595 40.000 0.00 0.00 0.00 1.89
6322 7129 5.515797 AACTTGGTCAAAGGTAGAAAAGC 57.484 39.130 0.00 0.00 40.51 3.51
6667 7474 5.908831 TGCTCCCTCCCTAACTTAATATGAA 59.091 40.000 0.00 0.00 0.00 2.57
6690 7497 9.429359 CAGCTAAAGGTACCAGATAAAGATATG 57.571 37.037 15.94 0.00 0.00 1.78
6931 7738 1.202268 GCTGGCTGATCTGAATTGTGC 60.202 52.381 3.42 0.00 0.00 4.57
7008 7815 6.816640 TGTCTTAGATCAAGTAATTTGGGACG 59.183 38.462 0.00 0.00 37.39 4.79
7042 7889 3.771577 AATTCATACTCCATCCGTCCC 57.228 47.619 0.00 0.00 0.00 4.46
7050 7897 7.658525 AATGGCATAACAAATTCATACTCCA 57.341 32.000 0.00 0.00 0.00 3.86
7137 7984 6.319658 AGACAACATTCCATGGACATTCATAC 59.680 38.462 15.91 3.30 33.60 2.39
7216 8150 5.063180 CAGAATGTGATTAAGCAGGCAAA 57.937 39.130 0.00 0.00 0.00 3.68
7234 8168 4.080413 TCATAGGCATGACATGGAACAGAA 60.080 41.667 17.03 0.00 37.87 3.02
7246 8180 3.407698 ACAAAACGTGTCATAGGCATGA 58.592 40.909 0.00 0.00 34.38 3.07
7247 8181 3.829886 ACAAAACGTGTCATAGGCATG 57.170 42.857 0.00 0.00 34.38 4.06
7424 8363 4.199432 AGTAGTGACAATGGAAGCAGAG 57.801 45.455 0.00 0.00 0.00 3.35
7432 8371 6.596888 AGATGATGTGAAAGTAGTGACAATGG 59.403 38.462 0.00 0.00 0.00 3.16
7443 8382 5.190528 ACCCACTATCAGATGATGTGAAAGT 59.809 40.000 18.66 7.71 36.54 2.66
7451 8390 3.706594 ACGAACACCCACTATCAGATGAT 59.293 43.478 0.31 0.31 38.51 2.45
7471 8410 9.941991 CAATAAATTTAATCTGAAGCACAAACG 57.058 29.630 1.21 0.00 0.00 3.60
7586 8525 4.569943 ACACAGTTACTACAAGGATGCAG 58.430 43.478 0.00 0.00 0.00 4.41
7587 8526 4.617253 ACACAGTTACTACAAGGATGCA 57.383 40.909 0.00 0.00 0.00 3.96
7588 8527 5.962433 TCTACACAGTTACTACAAGGATGC 58.038 41.667 0.00 0.00 0.00 3.91
7656 8595 3.438434 CAGGCTACAAGGAAGAAAGAAGC 59.562 47.826 0.00 0.00 0.00 3.86
7676 8615 0.318107 CAGGCGGCAAAAACTGACAG 60.318 55.000 13.08 0.00 28.94 3.51
7678 8617 0.317854 GACAGGCGGCAAAAACTGAC 60.318 55.000 13.08 0.00 35.08 3.51
7709 8650 2.094417 GTCATGCGTGGCTCTAGAAAAC 59.906 50.000 2.46 0.00 0.00 2.43
7714 8655 1.284657 CAAGTCATGCGTGGCTCTAG 58.715 55.000 14.59 3.34 40.00 2.43
7715 8656 0.108186 CCAAGTCATGCGTGGCTCTA 60.108 55.000 14.59 0.00 40.00 2.43
7727 8668 1.968493 GACCCTACACTGTCCAAGTCA 59.032 52.381 0.00 0.00 36.83 3.41
7733 8674 0.544595 ACCCTGACCCTACACTGTCC 60.545 60.000 0.00 0.00 0.00 4.02
7761 8703 3.083349 CCCATCTCAGCGGGGTGA 61.083 66.667 0.22 0.22 38.95 4.02
7762 8704 3.083349 TCCCATCTCAGCGGGGTG 61.083 66.667 0.00 0.00 43.29 4.61
7763 8705 2.765807 CTCCCATCTCAGCGGGGT 60.766 66.667 0.00 0.00 43.29 4.95
7890 8832 1.906824 ACACACCCGAGACACCGAT 60.907 57.895 0.00 0.00 0.00 4.18
7901 8843 6.821665 AGATATGTACATTGTTACACACACCC 59.178 38.462 14.77 0.00 33.98 4.61
7927 8869 2.159627 CACGGACAACTTTGCTATCACC 59.840 50.000 0.00 0.00 0.00 4.02
7946 8888 3.066203 CACCACCTTGACAAACTAACCAC 59.934 47.826 0.00 0.00 0.00 4.16
8013 8957 2.598565 TCTATCAGATGAGTTCCCGGG 58.401 52.381 16.85 16.85 0.00 5.73
8047 8991 2.268107 ACCAATCCCAACCAATGCATT 58.732 42.857 5.99 5.99 0.00 3.56
8048 8992 1.955451 ACCAATCCCAACCAATGCAT 58.045 45.000 0.00 0.00 0.00 3.96
8049 8993 1.347050 CAACCAATCCCAACCAATGCA 59.653 47.619 0.00 0.00 0.00 3.96
8050 8994 1.338960 CCAACCAATCCCAACCAATGC 60.339 52.381 0.00 0.00 0.00 3.56
8051 8995 1.278699 CCCAACCAATCCCAACCAATG 59.721 52.381 0.00 0.00 0.00 2.82
8052 8996 1.150986 TCCCAACCAATCCCAACCAAT 59.849 47.619 0.00 0.00 0.00 3.16
8054 8998 0.789687 ATCCCAACCAATCCCAACCA 59.210 50.000 0.00 0.00 0.00 3.67
8055 8999 2.666317 CTATCCCAACCAATCCCAACC 58.334 52.381 0.00 0.00 0.00 3.77
8056 9000 2.031870 GCTATCCCAACCAATCCCAAC 58.968 52.381 0.00 0.00 0.00 3.77
8057 9001 1.929494 AGCTATCCCAACCAATCCCAA 59.071 47.619 0.00 0.00 0.00 4.12
8060 9004 3.600388 CGATAGCTATCCCAACCAATCC 58.400 50.000 24.73 0.00 0.00 3.01
8061 9005 3.008049 ACCGATAGCTATCCCAACCAATC 59.992 47.826 24.73 2.23 0.00 2.67
8080 9024 2.125912 CTGACCTTCTGCCGACCG 60.126 66.667 0.00 0.00 0.00 4.79
8082 9026 1.739562 CTGCTGACCTTCTGCCGAC 60.740 63.158 3.00 0.00 40.10 4.79
8095 9039 1.131883 GTATTTGTGCCTGAGCTGCTG 59.868 52.381 7.01 0.00 40.80 4.41
8121 9065 0.461693 GAGGCTCACATCTCCACTGC 60.462 60.000 10.25 0.00 0.00 4.40
8129 9073 0.257039 ACCCAATGGAGGCTCACATC 59.743 55.000 17.69 0.00 34.81 3.06
8150 9094 3.202906 TGCCTTCAAACTGTACTGTGAC 58.797 45.455 6.13 0.00 0.00 3.67
8170 9114 0.108520 GGGTGTTTCAGGCATGCATG 60.109 55.000 25.78 25.78 0.00 4.06
8171 9115 1.259840 GGGGTGTTTCAGGCATGCAT 61.260 55.000 21.36 10.32 0.00 3.96
8172 9116 1.907807 GGGGTGTTTCAGGCATGCA 60.908 57.895 21.36 0.00 0.00 3.96
8173 9117 1.907807 TGGGGTGTTTCAGGCATGC 60.908 57.895 9.90 9.90 0.00 4.06
8174 9118 0.827089 TGTGGGGTGTTTCAGGCATG 60.827 55.000 0.00 0.00 0.00 4.06
8186 9130 3.751518 GATTTCACTGTACTTGTGGGGT 58.248 45.455 15.77 5.85 36.21 4.95
8187 9131 2.742053 CGATTTCACTGTACTTGTGGGG 59.258 50.000 15.77 2.80 36.21 4.96
8188 9132 3.399330 ACGATTTCACTGTACTTGTGGG 58.601 45.455 15.77 6.76 36.21 4.61
8223 9167 6.695713 GGTGGTTGATTTCTTGTAAGTTGTTC 59.304 38.462 0.00 0.00 0.00 3.18
8241 9189 2.433970 AGAAACAACAATGGGGTGGTTG 59.566 45.455 0.00 0.00 45.52 3.77
8271 9219 7.231115 GGGTGGTTAATTCCTTGTAAGTTGTTA 59.769 37.037 0.00 0.00 0.00 2.41
8285 9233 3.227614 ACAACAGTGGGGTGGTTAATTC 58.772 45.455 0.00 0.00 0.00 2.17
8354 9302 7.280652 TCTGCTGTTATGAAATCGATCAATCAA 59.719 33.333 0.00 0.00 32.06 2.57
8363 9314 4.944962 TGGTTCTGCTGTTATGAAATCG 57.055 40.909 0.00 0.00 0.00 3.34
8400 9351 4.142381 CCACAGTAGCTATTTCCCTTTTGC 60.142 45.833 0.00 0.00 0.00 3.68
8471 9427 5.113383 GCTTGATGCAATTTGGATGATCAA 58.887 37.500 8.23 6.68 42.31 2.57
8472 9428 4.689071 GCTTGATGCAATTTGGATGATCA 58.311 39.130 8.23 0.00 42.31 2.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.