Multiple sequence alignment - TraesCS4D01G023300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G023300 chr4D 100.000 3208 0 0 1 3208 10012088 10008881 0.000000e+00 5925.0
1 TraesCS4D01G023300 chr4D 80.860 721 113 12 1144 1846 9591951 9592664 7.830000e-151 544.0
2 TraesCS4D01G023300 chr4B 82.252 1927 214 76 1 1843 19152759 19154641 0.000000e+00 1546.0
3 TraesCS4D01G023300 chr4B 94.844 737 37 1 1108 1843 19008014 19008750 0.000000e+00 1149.0
4 TraesCS4D01G023300 chr4B 94.165 617 35 1 1211 1826 19513741 19513125 0.000000e+00 939.0
5 TraesCS4D01G023300 chr4B 95.992 524 21 0 1840 2363 19154710 19155233 0.000000e+00 852.0
6 TraesCS4D01G023300 chr4B 93.939 528 20 6 1840 2363 19418366 19417847 0.000000e+00 787.0
7 TraesCS4D01G023300 chr4B 93.702 524 30 2 1840 2363 19001938 19001418 0.000000e+00 782.0
8 TraesCS4D01G023300 chr4B 97.143 420 12 0 2365 2784 27975666 27975247 0.000000e+00 710.0
9 TraesCS4D01G023300 chr4B 95.529 425 18 1 2783 3206 19417868 19417444 0.000000e+00 678.0
10 TraesCS4D01G023300 chr4B 95.316 427 19 1 2783 3208 19155212 19155638 0.000000e+00 676.0
11 TraesCS4D01G023300 chr4B 94.614 427 22 1 2783 3208 19009289 19009715 0.000000e+00 660.0
12 TraesCS4D01G023300 chr4B 94.379 427 22 2 2783 3208 18856347 18855922 0.000000e+00 654.0
13 TraesCS4D01G023300 chr4B 93.677 427 25 2 2783 3208 19001439 19001014 3.490000e-179 638.0
14 TraesCS4D01G023300 chr4B 79.699 931 127 38 1 890 19003730 19002821 1.640000e-172 616.0
15 TraesCS4D01G023300 chr4B 88.636 528 29 20 1840 2363 19008810 19009310 5.880000e-172 614.0
16 TraesCS4D01G023300 chr4B 93.189 323 21 1 1522 1843 19002331 19002009 1.040000e-129 473.0
17 TraesCS4D01G023300 chr4B 88.041 393 32 6 1078 1464 19002719 19002336 4.880000e-123 451.0
18 TraesCS4D01G023300 chr4B 93.991 233 14 0 2131 2363 18856558 18856326 1.420000e-93 353.0
19 TraesCS4D01G023300 chr4B 80.135 443 66 13 1421 1846 19038495 19038932 8.640000e-81 311.0
20 TraesCS4D01G023300 chr4B 88.820 161 18 0 1154 1314 19036784 19036944 7.020000e-47 198.0
21 TraesCS4D01G023300 chrUn 90.439 774 56 9 1078 1843 52367950 52368713 0.000000e+00 1003.0
22 TraesCS4D01G023300 chrUn 90.439 774 56 9 1078 1843 151468509 151469272 0.000000e+00 1003.0
23 TraesCS4D01G023300 chrUn 93.702 524 30 2 1840 2363 151469343 151469863 0.000000e+00 782.0
24 TraesCS4D01G023300 chrUn 93.702 524 30 2 1840 2363 381924380 381923860 0.000000e+00 782.0
25 TraesCS4D01G023300 chrUn 94.379 427 23 1 2783 3208 151469842 151470268 0.000000e+00 654.0
26 TraesCS4D01G023300 chrUn 94.379 427 23 1 2783 3208 381923881 381923455 0.000000e+00 654.0
27 TraesCS4D01G023300 chrUn 94.145 427 24 1 2783 3208 385285818 385285392 0.000000e+00 649.0
28 TraesCS4D01G023300 chrUn 94.145 427 23 2 2783 3208 405017429 405017854 0.000000e+00 649.0
29 TraesCS4D01G023300 chrUn 79.225 929 115 42 1 887 151467374 151468266 2.780000e-160 575.0
30 TraesCS4D01G023300 chrUn 78.840 931 116 45 1 887 52366816 52367709 1.300000e-153 553.0
31 TraesCS4D01G023300 chrUn 88.889 423 32 6 1078 1494 406597543 406597956 1.030000e-139 507.0
32 TraesCS4D01G023300 chrUn 92.795 347 22 3 1499 1843 381924796 381924451 1.720000e-137 499.0
33 TraesCS4D01G023300 chrUn 93.667 300 19 0 2064 2363 385286096 385285797 1.760000e-122 449.0
34 TraesCS4D01G023300 chrUn 93.991 233 14 0 2131 2363 405017218 405017450 1.420000e-93 353.0
35 TraesCS4D01G023300 chrUn 95.833 48 2 0 944 991 389910960 389911007 9.540000e-11 78.7
36 TraesCS4D01G023300 chrUn 95.833 48 2 0 944 991 390438466 390438513 9.540000e-11 78.7
37 TraesCS4D01G023300 chr2D 99.045 419 4 0 2365 2783 396665841 396665423 0.000000e+00 752.0
38 TraesCS4D01G023300 chr2D 98.568 419 6 0 2365 2783 571922011 571922429 0.000000e+00 741.0
39 TraesCS4D01G023300 chr6D 98.807 419 4 1 2365 2783 13730662 13731079 0.000000e+00 745.0
40 TraesCS4D01G023300 chr3D 98.804 418 5 0 2365 2782 588825186 588824769 0.000000e+00 745.0
41 TraesCS4D01G023300 chr3D 98.293 410 6 1 2365 2774 405510641 405510233 0.000000e+00 717.0
42 TraesCS4D01G023300 chr5D 98.333 420 7 0 2365 2784 560922276 560921857 0.000000e+00 737.0
43 TraesCS4D01G023300 chr5D 98.091 419 8 0 2365 2783 14603360 14602942 0.000000e+00 730.0
44 TraesCS4D01G023300 chr7B 97.190 427 11 1 2363 2788 619081201 619080775 0.000000e+00 721.0
45 TraesCS4D01G023300 chr4A 87.842 329 34 4 2 326 593731978 593732304 6.490000e-102 381.0
46 TraesCS4D01G023300 chr3A 74.432 704 123 27 1156 1842 687644870 687644207 1.910000e-62 250.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G023300 chr4D 10008881 10012088 3207 True 5925.000000 5925 100.000000 1 3208 1 chr4D.!!$R1 3207
1 TraesCS4D01G023300 chr4D 9591951 9592664 713 False 544.000000 544 80.860000 1144 1846 1 chr4D.!!$F1 702
2 TraesCS4D01G023300 chr4B 19152759 19155638 2879 False 1024.666667 1546 91.186667 1 3208 3 chr4B.!!$F3 3207
3 TraesCS4D01G023300 chr4B 19513125 19513741 616 True 939.000000 939 94.165000 1211 1826 1 chr4B.!!$R1 615
4 TraesCS4D01G023300 chr4B 19008014 19009715 1701 False 807.666667 1149 92.698000 1108 3208 3 chr4B.!!$F1 2100
5 TraesCS4D01G023300 chr4B 19417444 19418366 922 True 732.500000 787 94.734000 1840 3206 2 chr4B.!!$R5 1366
6 TraesCS4D01G023300 chr4B 19001014 19003730 2716 True 592.000000 782 89.661600 1 3208 5 chr4B.!!$R4 3207
7 TraesCS4D01G023300 chr4B 18855922 18856558 636 True 503.500000 654 94.185000 2131 3208 2 chr4B.!!$R3 1077
8 TraesCS4D01G023300 chr4B 19036784 19038932 2148 False 254.500000 311 84.477500 1154 1846 2 chr4B.!!$F2 692
9 TraesCS4D01G023300 chrUn 52366816 52368713 1897 False 778.000000 1003 84.639500 1 1843 2 chrUn.!!$F4 1842
10 TraesCS4D01G023300 chrUn 151467374 151470268 2894 False 753.500000 1003 89.436250 1 3208 4 chrUn.!!$F5 3207
11 TraesCS4D01G023300 chrUn 381923455 381924796 1341 True 645.000000 782 93.625333 1499 3208 3 chrUn.!!$R1 1709
12 TraesCS4D01G023300 chrUn 385285392 385286096 704 True 549.000000 649 93.906000 2064 3208 2 chrUn.!!$R2 1144
13 TraesCS4D01G023300 chrUn 405017218 405017854 636 False 501.000000 649 94.068000 2131 3208 2 chrUn.!!$F6 1077
14 TraesCS4D01G023300 chr3A 687644207 687644870 663 True 250.000000 250 74.432000 1156 1842 1 chr3A.!!$R1 686

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
273 279 0.882042 AAGAGTCGTGCTTGCACAGG 60.882 55.0 22.97 9.82 0.00 4.00 F
1025 1124 0.107456 ATGCAAGAGCTATCCCACCG 59.893 55.0 0.00 0.00 42.74 4.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1324 1435 0.110486 GAAGAGCTTTGGTGGGTCCA 59.890 55.0 0.0 0.0 45.60 4.02 R
2755 4426 0.035343 GAAAAGGAGGAAGACCCCCG 60.035 60.0 0.0 0.0 36.73 5.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.166489 CGGCTTTCACCTACCTAAGAG 57.834 52.381 0.00 0.00 0.00 2.85
46 47 6.743773 GCACATCAATCTAGATCTTAGGCCTT 60.744 42.308 12.58 0.00 0.00 4.35
54 55 3.730269 AGATCTTAGGCCTTGTCCTCTT 58.270 45.455 12.58 0.00 37.66 2.85
55 56 3.454082 AGATCTTAGGCCTTGTCCTCTTG 59.546 47.826 12.58 0.00 37.66 3.02
76 77 3.002451 TGTTGTACCGTTGTAATGTGCAC 59.998 43.478 10.75 10.75 0.00 4.57
83 84 5.726397 ACCGTTGTAATGTGCACTCTATAA 58.274 37.500 19.41 10.55 0.00 0.98
85 86 5.579119 CCGTTGTAATGTGCACTCTATAACA 59.421 40.000 24.09 15.85 0.00 2.41
131 132 6.205464 CAGTGGATGGAAATATAGACGCAATT 59.795 38.462 0.00 0.00 0.00 2.32
137 138 7.477144 TGGAAATATAGACGCAATTACACAG 57.523 36.000 0.00 0.00 0.00 3.66
173 175 3.215151 TCCCTATTTGACGCAAAACACA 58.785 40.909 8.65 0.00 36.90 3.72
174 176 3.252215 TCCCTATTTGACGCAAAACACAG 59.748 43.478 8.65 5.09 36.90 3.66
213 215 2.545952 CCAATAGGATCTCGGTTCCACG 60.546 54.545 0.00 0.00 36.89 4.94
217 219 1.141234 GATCTCGGTTCCACGGGTC 59.859 63.158 0.00 0.00 35.42 4.46
244 248 6.128063 GCTCATGAGAAAATCCTATATGCCAC 60.128 42.308 27.04 0.00 0.00 5.01
250 254 5.244626 AGAAAATCCTATATGCCACATTGCC 59.755 40.000 0.00 0.00 0.00 4.52
267 271 1.205064 CCGCAAAGAGTCGTGCTTG 59.795 57.895 16.64 6.61 38.66 4.01
269 273 1.648720 GCAAAGAGTCGTGCTTGCA 59.351 52.632 12.94 0.00 37.78 4.08
273 279 0.882042 AAGAGTCGTGCTTGCACAGG 60.882 55.000 22.97 9.82 0.00 4.00
277 283 2.591429 CGTGCTTGCACAGGACCA 60.591 61.111 22.97 0.00 40.79 4.02
285 291 1.003355 GCACAGGACCAAGCTAGCA 60.003 57.895 18.83 0.00 0.00 3.49
286 292 1.023513 GCACAGGACCAAGCTAGCAG 61.024 60.000 18.83 8.92 0.00 4.24
297 303 6.407412 GGACCAAGCTAGCAGCATGATATATA 60.407 42.308 18.83 0.00 42.02 0.86
307 313 3.713764 AGCATGATATATAGGCAGACCCC 59.286 47.826 0.00 0.00 36.11 4.95
318 324 1.547901 GGCAGACCCCTTTTAGCAGTT 60.548 52.381 0.00 0.00 0.00 3.16
330 336 2.125106 GCAGTTAGGTGCTCCGGG 60.125 66.667 0.00 0.00 40.54 5.73
344 350 4.859784 CGGGTTTTCGGAACATGC 57.140 55.556 0.00 0.00 0.00 4.06
352 358 1.710013 TTCGGAACATGCGAGAAGTC 58.290 50.000 0.00 0.00 42.14 3.01
353 359 0.888619 TCGGAACATGCGAGAAGTCT 59.111 50.000 0.00 0.00 34.66 3.24
354 360 0.994995 CGGAACATGCGAGAAGTCTG 59.005 55.000 0.00 0.00 30.86 3.51
359 365 2.838736 ACATGCGAGAAGTCTGTGTTT 58.161 42.857 0.00 0.00 0.00 2.83
361 367 2.595124 TGCGAGAAGTCTGTGTTTGA 57.405 45.000 0.00 0.00 0.00 2.69
365 371 4.049186 GCGAGAAGTCTGTGTTTGAGTTA 58.951 43.478 0.00 0.00 0.00 2.24
369 375 7.630924 CGAGAAGTCTGTGTTTGAGTTATTTT 58.369 34.615 0.00 0.00 0.00 1.82
370 376 7.584123 CGAGAAGTCTGTGTTTGAGTTATTTTG 59.416 37.037 0.00 0.00 0.00 2.44
379 385 7.547370 TGTGTTTGAGTTATTTTGGTTTTGGAG 59.453 33.333 0.00 0.00 0.00 3.86
435 443 7.831691 TTTCATGTTGATTTCCTTTACTGGA 57.168 32.000 0.00 0.00 0.00 3.86
528 536 5.534407 GGTGTTTCCGGATTTGTACAAAAT 58.466 37.500 23.97 12.91 33.56 1.82
529 537 5.986741 GGTGTTTCCGGATTTGTACAAAATT 59.013 36.000 23.97 9.58 33.56 1.82
563 571 9.617975 TTTGTTCACATTTTCAAAAATTGTTCC 57.382 25.926 0.00 0.00 36.52 3.62
564 572 7.756558 TGTTCACATTTTCAAAAATTGTTCCC 58.243 30.769 0.00 0.00 36.52 3.97
565 573 7.609532 TGTTCACATTTTCAAAAATTGTTCCCT 59.390 29.630 0.00 0.00 36.52 4.20
622 632 9.489393 AAAAGCTTGAAATTTCGAATTTTGTTC 57.511 25.926 19.58 8.75 0.00 3.18
623 633 7.769272 AGCTTGAAATTTCGAATTTTGTTCA 57.231 28.000 19.58 10.85 0.00 3.18
624 634 7.621102 AGCTTGAAATTTCGAATTTTGTTCAC 58.379 30.769 19.58 8.02 0.00 3.18
626 636 7.902403 GCTTGAAATTTCGAATTTTGTTCACAA 59.098 29.630 19.58 15.30 0.00 3.33
627 637 9.919348 CTTGAAATTTCGAATTTTGTTCACAAT 57.081 25.926 19.58 0.00 35.55 2.71
665 676 8.638565 GTTCGGAATTTCAACTTGTTATTCATG 58.361 33.333 14.73 0.00 0.00 3.07
702 713 8.248945 TGTTCCCAATTTTAAGAAAACACGTTA 58.751 29.630 0.00 0.00 32.37 3.18
704 715 9.465985 TTCCCAATTTTAAGAAAACACGTTATC 57.534 29.630 0.00 0.00 32.37 1.75
794 807 9.656040 CATGGATCCAAAGAATGTTTCAATTTA 57.344 29.630 20.67 0.00 0.00 1.40
832 869 1.705337 CCCGCTCTGTACGCAATTGG 61.705 60.000 7.72 0.00 0.00 3.16
837 874 3.395470 CTGTACGCAATTGGCCGGC 62.395 63.158 21.18 21.18 40.31 6.13
887 924 2.277084 ACCAGATATCCAAACGCGTTC 58.723 47.619 26.77 11.08 0.00 3.95
890 927 3.001330 CCAGATATCCAAACGCGTTCTTC 59.999 47.826 26.77 14.76 0.00 2.87
892 929 4.026475 CAGATATCCAAACGCGTTCTTCTC 60.026 45.833 26.77 16.27 0.00 2.87
894 931 1.942677 TCCAAACGCGTTCTTCTCAA 58.057 45.000 26.77 4.07 0.00 3.02
895 932 2.281517 TCCAAACGCGTTCTTCTCAAA 58.718 42.857 26.77 2.43 0.00 2.69
897 934 3.127203 TCCAAACGCGTTCTTCTCAAAAA 59.873 39.130 26.77 0.00 0.00 1.94
922 983 3.924686 ACACGCGTAAAGGAAATAGACTG 59.075 43.478 13.44 0.00 0.00 3.51
931 992 1.410224 GGAAATAGACTGGGCCAAGGG 60.410 57.143 13.11 0.00 0.00 3.95
947 1019 2.884639 CAAGGGTCGGTCAGAATTTTGT 59.115 45.455 0.00 0.00 0.00 2.83
948 1020 2.504367 AGGGTCGGTCAGAATTTTGTG 58.496 47.619 0.00 0.00 0.00 3.33
955 1027 3.638484 GGTCAGAATTTTGTGGTTTCCG 58.362 45.455 0.00 0.00 0.00 4.30
997 1069 3.055719 CGGCTGGGACGTGCAAAT 61.056 61.111 9.96 0.00 32.38 2.32
1006 1105 7.214381 GGCTGGGACGTGCAAATATATATATA 58.786 38.462 9.96 4.92 32.38 0.86
1025 1124 0.107456 ATGCAAGAGCTATCCCACCG 59.893 55.000 0.00 0.00 42.74 4.94
1040 1139 4.143543 TCCCACCGTCGACATATACATTA 58.856 43.478 17.16 0.00 0.00 1.90
1045 1144 6.525628 CCACCGTCGACATATACATTACATAC 59.474 42.308 17.16 0.00 0.00 2.39
1047 1146 7.480855 CACCGTCGACATATACATTACATACTC 59.519 40.741 17.16 0.00 0.00 2.59
1049 1148 6.965500 CGTCGACATATACATTACATACTCCC 59.035 42.308 17.16 0.00 0.00 4.30
1051 1150 9.170734 GTCGACATATACATTACATACTCCCTA 57.829 37.037 11.55 0.00 0.00 3.53
1052 1151 9.170734 TCGACATATACATTACATACTCCCTAC 57.829 37.037 0.00 0.00 0.00 3.18
1053 1152 8.121086 CGACATATACATTACATACTCCCTACG 58.879 40.741 0.00 0.00 0.00 3.51
1054 1153 8.874744 ACATATACATTACATACTCCCTACGT 57.125 34.615 0.00 0.00 0.00 3.57
1055 1154 8.954350 ACATATACATTACATACTCCCTACGTC 58.046 37.037 0.00 0.00 0.00 4.34
1056 1155 6.830873 ATACATTACATACTCCCTACGTCC 57.169 41.667 0.00 0.00 0.00 4.79
1057 1156 3.893813 ACATTACATACTCCCTACGTCCC 59.106 47.826 0.00 0.00 0.00 4.46
1058 1157 3.668141 TTACATACTCCCTACGTCCCA 57.332 47.619 0.00 0.00 0.00 4.37
1059 1158 1.772836 ACATACTCCCTACGTCCCAC 58.227 55.000 0.00 0.00 0.00 4.61
1061 1160 2.104967 CATACTCCCTACGTCCCACAA 58.895 52.381 0.00 0.00 0.00 3.33
1062 1161 2.537633 TACTCCCTACGTCCCACAAT 57.462 50.000 0.00 0.00 0.00 2.71
1064 1163 3.042059 ACTCCCTACGTCCCACAATAT 57.958 47.619 0.00 0.00 0.00 1.28
1065 1164 4.188937 ACTCCCTACGTCCCACAATATA 57.811 45.455 0.00 0.00 0.00 0.86
1066 1165 4.549668 ACTCCCTACGTCCCACAATATAA 58.450 43.478 0.00 0.00 0.00 0.98
1068 1167 4.288398 TCCCTACGTCCCACAATATAACA 58.712 43.478 0.00 0.00 0.00 2.41
1069 1168 4.903049 TCCCTACGTCCCACAATATAACAT 59.097 41.667 0.00 0.00 0.00 2.71
1070 1169 5.011329 TCCCTACGTCCCACAATATAACATC 59.989 44.000 0.00 0.00 0.00 3.06
1071 1170 5.221561 CCCTACGTCCCACAATATAACATCA 60.222 44.000 0.00 0.00 0.00 3.07
1072 1171 6.464222 CCTACGTCCCACAATATAACATCAT 58.536 40.000 0.00 0.00 0.00 2.45
1073 1172 6.934645 CCTACGTCCCACAATATAACATCATT 59.065 38.462 0.00 0.00 0.00 2.57
1074 1173 7.444183 CCTACGTCCCACAATATAACATCATTT 59.556 37.037 0.00 0.00 0.00 2.32
1075 1174 7.639113 ACGTCCCACAATATAACATCATTTT 57.361 32.000 0.00 0.00 0.00 1.82
1076 1175 8.062065 ACGTCCCACAATATAACATCATTTTT 57.938 30.769 0.00 0.00 0.00 1.94
1118 1221 2.371841 TCACAAGGAAGCCATACACACT 59.628 45.455 0.00 0.00 0.00 3.55
1140 1245 1.000739 CAATCCATGGCCCTGGTGT 59.999 57.895 24.62 13.24 37.57 4.16
1177 1282 3.918220 CGACATCCTCGCTTGCGC 61.918 66.667 10.38 0.00 35.06 6.09
1324 1435 0.619832 TTCATGGAGGAGCTCTGCCT 60.620 55.000 14.64 2.25 38.81 4.75
1799 3376 2.067766 GATTTGTACACCGTTACGCCA 58.932 47.619 0.00 0.00 0.00 5.69
2141 3812 8.460428 AGCACAAGTACTAGTATCTCTTAACAC 58.540 37.037 5.75 0.00 0.00 3.32
2145 3816 7.014092 AGTACTAGTATCTCTTAACACGCAC 57.986 40.000 5.75 0.00 0.00 5.34
2192 3863 3.867857 TGCAGCATAACTTTATCGGACA 58.132 40.909 0.00 0.00 0.00 4.02
2241 3912 7.670364 CCAACAGGAAGTAAAATGGAAGATTT 58.330 34.615 0.00 0.00 0.00 2.17
2346 4017 3.758023 TGGTTGCTTACTGAATCATGTGG 59.242 43.478 0.00 0.00 0.00 4.17
2347 4018 3.758554 GGTTGCTTACTGAATCATGTGGT 59.241 43.478 0.00 0.00 0.00 4.16
2348 4019 4.941263 GGTTGCTTACTGAATCATGTGGTA 59.059 41.667 0.00 0.00 0.00 3.25
2349 4020 5.414454 GGTTGCTTACTGAATCATGTGGTAA 59.586 40.000 0.00 0.00 0.00 2.85
2350 4021 6.072175 GGTTGCTTACTGAATCATGTGGTAAA 60.072 38.462 0.00 0.00 0.00 2.01
2351 4022 7.362920 GGTTGCTTACTGAATCATGTGGTAAAT 60.363 37.037 0.00 0.00 0.00 1.40
2352 4023 7.087409 TGCTTACTGAATCATGTGGTAAATG 57.913 36.000 0.00 0.00 0.00 2.32
2353 4024 6.095300 TGCTTACTGAATCATGTGGTAAATGG 59.905 38.462 0.00 0.00 0.00 3.16
2354 4025 6.460123 GCTTACTGAATCATGTGGTAAATGGG 60.460 42.308 0.00 0.00 0.00 4.00
2355 4026 5.191727 ACTGAATCATGTGGTAAATGGGA 57.808 39.130 0.00 0.00 0.00 4.37
2356 4027 5.195940 ACTGAATCATGTGGTAAATGGGAG 58.804 41.667 0.00 0.00 0.00 4.30
2357 4028 5.191727 TGAATCATGTGGTAAATGGGAGT 57.808 39.130 0.00 0.00 0.00 3.85
2358 4029 4.949238 TGAATCATGTGGTAAATGGGAGTG 59.051 41.667 0.00 0.00 0.00 3.51
2359 4030 3.364460 TCATGTGGTAAATGGGAGTGG 57.636 47.619 0.00 0.00 0.00 4.00
2360 4031 2.025416 TCATGTGGTAAATGGGAGTGGG 60.025 50.000 0.00 0.00 0.00 4.61
2361 4032 1.451449 TGTGGTAAATGGGAGTGGGT 58.549 50.000 0.00 0.00 0.00 4.51
2362 4033 1.074727 TGTGGTAAATGGGAGTGGGTG 59.925 52.381 0.00 0.00 0.00 4.61
2363 4034 1.074889 GTGGTAAATGGGAGTGGGTGT 59.925 52.381 0.00 0.00 0.00 4.16
2364 4035 2.306512 GTGGTAAATGGGAGTGGGTGTA 59.693 50.000 0.00 0.00 0.00 2.90
2365 4036 2.574369 TGGTAAATGGGAGTGGGTGTAG 59.426 50.000 0.00 0.00 0.00 2.74
2366 4037 2.092592 GGTAAATGGGAGTGGGTGTAGG 60.093 54.545 0.00 0.00 0.00 3.18
2367 4038 2.053747 AAATGGGAGTGGGTGTAGGA 57.946 50.000 0.00 0.00 0.00 2.94
2368 4039 2.286935 AATGGGAGTGGGTGTAGGAT 57.713 50.000 0.00 0.00 0.00 3.24
2369 4040 1.511613 ATGGGAGTGGGTGTAGGATG 58.488 55.000 0.00 0.00 0.00 3.51
2370 4041 0.620410 TGGGAGTGGGTGTAGGATGG 60.620 60.000 0.00 0.00 0.00 3.51
2371 4042 0.620700 GGGAGTGGGTGTAGGATGGT 60.621 60.000 0.00 0.00 0.00 3.55
2372 4043 0.541863 GGAGTGGGTGTAGGATGGTG 59.458 60.000 0.00 0.00 0.00 4.17
2373 4044 0.541863 GAGTGGGTGTAGGATGGTGG 59.458 60.000 0.00 0.00 0.00 4.61
2374 4045 1.077716 GTGGGTGTAGGATGGTGGC 60.078 63.158 0.00 0.00 0.00 5.01
2375 4046 2.189521 GGGTGTAGGATGGTGGCG 59.810 66.667 0.00 0.00 0.00 5.69
2376 4047 2.513897 GGTGTAGGATGGTGGCGC 60.514 66.667 0.00 0.00 0.00 6.53
2377 4048 2.584608 GTGTAGGATGGTGGCGCT 59.415 61.111 7.64 0.00 0.00 5.92
2378 4049 1.815421 GTGTAGGATGGTGGCGCTG 60.815 63.158 7.64 0.00 0.00 5.18
2379 4050 2.290287 TGTAGGATGGTGGCGCTGT 61.290 57.895 7.64 0.00 0.00 4.40
2380 4051 1.078426 GTAGGATGGTGGCGCTGTT 60.078 57.895 7.64 0.00 0.00 3.16
2381 4052 0.676782 GTAGGATGGTGGCGCTGTTT 60.677 55.000 7.64 0.00 0.00 2.83
2382 4053 0.676466 TAGGATGGTGGCGCTGTTTG 60.676 55.000 7.64 0.00 0.00 2.93
2383 4054 2.568090 GATGGTGGCGCTGTTTGG 59.432 61.111 7.64 0.00 0.00 3.28
2384 4055 3.631487 GATGGTGGCGCTGTTTGGC 62.631 63.158 7.64 0.00 0.00 4.52
2392 4063 4.683334 GCTGTTTGGCGTCGTGGC 62.683 66.667 0.00 0.00 45.12 5.01
2409 4080 4.193334 CGGCGTCGATGGCAGAGA 62.193 66.667 28.16 0.00 39.00 3.10
2410 4081 2.279120 GGCGTCGATGGCAGAGAG 60.279 66.667 24.90 0.00 0.00 3.20
2411 4082 2.775856 GGCGTCGATGGCAGAGAGA 61.776 63.158 24.90 0.00 0.00 3.10
2412 4083 1.587613 GCGTCGATGGCAGAGAGAC 60.588 63.158 6.79 0.00 0.00 3.36
2413 4084 1.064946 CGTCGATGGCAGAGAGACC 59.935 63.158 0.00 0.00 0.00 3.85
2414 4085 1.380403 CGTCGATGGCAGAGAGACCT 61.380 60.000 0.00 0.00 0.00 3.85
2415 4086 0.102120 GTCGATGGCAGAGAGACCTG 59.898 60.000 0.00 0.00 37.23 4.00
2416 4087 1.039785 TCGATGGCAGAGAGACCTGG 61.040 60.000 0.00 0.00 34.82 4.45
2420 4091 2.125753 GCAGAGAGACCTGGCACG 60.126 66.667 0.00 0.00 34.82 5.34
2421 4092 2.575993 CAGAGAGACCTGGCACGG 59.424 66.667 0.00 2.01 0.00 4.94
2422 4093 2.118513 AGAGAGACCTGGCACGGT 59.881 61.111 8.14 8.14 37.88 4.83
2423 4094 1.534235 AGAGAGACCTGGCACGGTT 60.534 57.895 9.50 1.81 35.59 4.44
2424 4095 1.079750 GAGAGACCTGGCACGGTTC 60.080 63.158 9.50 9.00 35.59 3.62
2425 4096 1.816863 GAGAGACCTGGCACGGTTCA 61.817 60.000 9.50 0.00 35.59 3.18
2426 4097 1.194781 AGAGACCTGGCACGGTTCAT 61.195 55.000 9.50 1.19 35.59 2.57
2427 4098 1.003355 AGACCTGGCACGGTTCATG 60.003 57.895 9.50 0.00 35.59 3.07
2428 4099 2.672996 ACCTGGCACGGTTCATGC 60.673 61.111 0.00 0.00 42.62 4.06
2429 4100 2.672651 CCTGGCACGGTTCATGCA 60.673 61.111 0.00 0.00 45.27 3.96
2430 4101 2.267351 CCTGGCACGGTTCATGCAA 61.267 57.895 0.00 0.00 45.27 4.08
2431 4102 1.081242 CTGGCACGGTTCATGCAAC 60.081 57.895 0.00 0.00 45.27 4.17
2432 4103 1.794151 CTGGCACGGTTCATGCAACA 61.794 55.000 0.00 0.00 45.27 3.33
2433 4104 1.081242 GGCACGGTTCATGCAACAG 60.081 57.895 0.00 7.94 45.27 3.16
2434 4105 1.654220 GCACGGTTCATGCAACAGT 59.346 52.632 0.00 8.43 43.42 3.55
2435 4106 0.871722 GCACGGTTCATGCAACAGTA 59.128 50.000 11.26 0.00 40.99 2.74
2436 4107 1.399727 GCACGGTTCATGCAACAGTAC 60.400 52.381 11.26 5.27 40.99 2.73
2437 4108 1.870402 CACGGTTCATGCAACAGTACA 59.130 47.619 11.26 0.00 40.99 2.90
2438 4109 2.096268 CACGGTTCATGCAACAGTACAG 60.096 50.000 11.26 0.00 40.99 2.74
2439 4110 1.135972 CGGTTCATGCAACAGTACAGC 60.136 52.381 0.00 0.00 36.61 4.40
2440 4111 2.154462 GGTTCATGCAACAGTACAGCT 58.846 47.619 0.00 0.00 36.61 4.24
2441 4112 2.160417 GGTTCATGCAACAGTACAGCTC 59.840 50.000 0.00 0.00 36.61 4.09
2442 4113 3.070018 GTTCATGCAACAGTACAGCTCT 58.930 45.455 0.00 0.00 34.76 4.09
2443 4114 2.691927 TCATGCAACAGTACAGCTCTG 58.308 47.619 0.00 0.00 38.68 3.35
2444 4115 2.299867 TCATGCAACAGTACAGCTCTGA 59.700 45.455 7.84 0.00 36.81 3.27
2445 4116 2.908688 TGCAACAGTACAGCTCTGAA 57.091 45.000 7.84 0.00 36.81 3.02
2446 4117 2.759191 TGCAACAGTACAGCTCTGAAG 58.241 47.619 7.84 1.57 36.81 3.02
2447 4118 2.365293 TGCAACAGTACAGCTCTGAAGA 59.635 45.455 7.84 0.00 36.81 2.87
2448 4119 3.007290 TGCAACAGTACAGCTCTGAAGAT 59.993 43.478 7.84 0.00 36.81 2.40
2449 4120 3.370366 GCAACAGTACAGCTCTGAAGATG 59.630 47.826 7.84 0.00 44.61 2.90
2450 4121 3.883830 ACAGTACAGCTCTGAAGATGG 57.116 47.619 7.84 0.00 43.33 3.51
2451 4122 3.435275 ACAGTACAGCTCTGAAGATGGA 58.565 45.455 7.84 0.00 43.33 3.41
2452 4123 4.029520 ACAGTACAGCTCTGAAGATGGAT 58.970 43.478 7.84 0.00 43.33 3.41
2453 4124 4.469227 ACAGTACAGCTCTGAAGATGGATT 59.531 41.667 7.84 0.00 43.33 3.01
2454 4125 4.809958 CAGTACAGCTCTGAAGATGGATTG 59.190 45.833 3.60 0.00 43.33 2.67
2455 4126 4.713814 AGTACAGCTCTGAAGATGGATTGA 59.286 41.667 3.60 0.00 43.33 2.57
2456 4127 4.774660 ACAGCTCTGAAGATGGATTGAT 57.225 40.909 3.60 0.00 43.33 2.57
2457 4128 4.452825 ACAGCTCTGAAGATGGATTGATG 58.547 43.478 3.60 0.00 43.33 3.07
2458 4129 3.815962 CAGCTCTGAAGATGGATTGATGG 59.184 47.826 0.00 0.00 35.22 3.51
2459 4130 3.458857 AGCTCTGAAGATGGATTGATGGT 59.541 43.478 0.00 0.00 0.00 3.55
2460 4131 4.657504 AGCTCTGAAGATGGATTGATGGTA 59.342 41.667 0.00 0.00 0.00 3.25
2461 4132 4.754114 GCTCTGAAGATGGATTGATGGTAC 59.246 45.833 0.00 0.00 0.00 3.34
2462 4133 4.948847 TCTGAAGATGGATTGATGGTACG 58.051 43.478 0.00 0.00 0.00 3.67
2463 4134 4.405680 TCTGAAGATGGATTGATGGTACGT 59.594 41.667 0.00 0.00 0.00 3.57
2464 4135 4.441792 TGAAGATGGATTGATGGTACGTG 58.558 43.478 0.00 0.00 0.00 4.49
2465 4136 3.475566 AGATGGATTGATGGTACGTGG 57.524 47.619 0.00 0.00 0.00 4.94
2466 4137 1.873591 GATGGATTGATGGTACGTGGC 59.126 52.381 0.00 0.00 0.00 5.01
2467 4138 0.908910 TGGATTGATGGTACGTGGCT 59.091 50.000 0.00 0.00 0.00 4.75
2468 4139 1.299541 GGATTGATGGTACGTGGCTG 58.700 55.000 0.00 0.00 0.00 4.85
2469 4140 0.657840 GATTGATGGTACGTGGCTGC 59.342 55.000 0.00 0.00 0.00 5.25
2470 4141 1.089481 ATTGATGGTACGTGGCTGCG 61.089 55.000 0.00 0.93 37.94 5.18
2471 4142 2.890474 GATGGTACGTGGCTGCGG 60.890 66.667 0.00 0.00 35.98 5.69
2506 4177 2.778899 AGGGGTCCTGGTTGAAGAG 58.221 57.895 0.00 0.00 29.57 2.85
2507 4178 1.002011 GGGGTCCTGGTTGAAGAGC 60.002 63.158 0.00 0.00 0.00 4.09
2508 4179 1.761174 GGGTCCTGGTTGAAGAGCA 59.239 57.895 0.00 0.00 0.00 4.26
2509 4180 0.606673 GGGTCCTGGTTGAAGAGCAC 60.607 60.000 0.00 0.00 0.00 4.40
2510 4181 0.951040 GGTCCTGGTTGAAGAGCACG 60.951 60.000 0.00 0.00 0.00 5.34
2511 4182 1.301716 TCCTGGTTGAAGAGCACGC 60.302 57.895 0.00 0.00 0.00 5.34
2512 4183 2.328099 CCTGGTTGAAGAGCACGCC 61.328 63.158 0.00 0.00 0.00 5.68
2513 4184 2.664851 TGGTTGAAGAGCACGCCG 60.665 61.111 0.00 0.00 0.00 6.46
2514 4185 3.423154 GGTTGAAGAGCACGCCGG 61.423 66.667 0.00 0.00 0.00 6.13
2515 4186 2.357034 GTTGAAGAGCACGCCGGA 60.357 61.111 5.05 0.00 0.00 5.14
2516 4187 2.357034 TTGAAGAGCACGCCGGAC 60.357 61.111 5.05 0.00 0.00 4.79
2517 4188 2.867855 TTGAAGAGCACGCCGGACT 61.868 57.895 5.05 0.00 0.00 3.85
2518 4189 2.811317 GAAGAGCACGCCGGACTG 60.811 66.667 5.05 0.00 0.00 3.51
2519 4190 4.379243 AAGAGCACGCCGGACTGG 62.379 66.667 5.05 0.00 42.50 4.00
2544 4215 4.910585 CCATACCCGGCAGGCGTC 62.911 72.222 16.17 0.00 40.58 5.19
2545 4216 4.910585 CATACCCGGCAGGCGTCC 62.911 72.222 16.17 0.00 40.58 4.79
2560 4231 4.232905 TCCTGGTTGGGACCTCAG 57.767 61.111 0.00 0.00 46.66 3.35
2561 4232 1.538876 TCCTGGTTGGGACCTCAGG 60.539 63.158 15.03 15.03 46.66 3.86
2562 4233 1.847968 CCTGGTTGGGACCTCAGGT 60.848 63.158 0.00 0.00 46.66 4.00
2576 4247 4.949121 ACCTCAGGTCTTAGATGTTAGGT 58.051 43.478 0.00 4.26 0.00 3.08
2577 4248 5.342866 ACCTCAGGTCTTAGATGTTAGGTT 58.657 41.667 0.00 0.00 30.79 3.50
2578 4249 5.785940 ACCTCAGGTCTTAGATGTTAGGTTT 59.214 40.000 0.00 0.00 30.79 3.27
2579 4250 6.109359 CCTCAGGTCTTAGATGTTAGGTTTG 58.891 44.000 0.00 0.00 0.00 2.93
2580 4251 6.070767 CCTCAGGTCTTAGATGTTAGGTTTGA 60.071 42.308 0.00 0.00 0.00 2.69
2581 4252 6.698380 TCAGGTCTTAGATGTTAGGTTTGAC 58.302 40.000 0.00 0.00 0.00 3.18
2582 4253 6.497259 TCAGGTCTTAGATGTTAGGTTTGACT 59.503 38.462 0.00 0.00 0.00 3.41
2583 4254 6.591834 CAGGTCTTAGATGTTAGGTTTGACTG 59.408 42.308 0.00 0.00 0.00 3.51
2584 4255 6.270231 AGGTCTTAGATGTTAGGTTTGACTGT 59.730 38.462 0.00 0.00 0.00 3.55
2585 4256 6.369065 GGTCTTAGATGTTAGGTTTGACTGTG 59.631 42.308 0.00 0.00 0.00 3.66
2586 4257 7.152645 GTCTTAGATGTTAGGTTTGACTGTGA 58.847 38.462 0.00 0.00 0.00 3.58
2587 4258 7.329717 GTCTTAGATGTTAGGTTTGACTGTGAG 59.670 40.741 0.00 0.00 0.00 3.51
2588 4259 4.899502 AGATGTTAGGTTTGACTGTGAGG 58.100 43.478 0.00 0.00 0.00 3.86
2589 4260 4.348168 AGATGTTAGGTTTGACTGTGAGGT 59.652 41.667 0.00 0.00 0.00 3.85
2590 4261 4.067972 TGTTAGGTTTGACTGTGAGGTC 57.932 45.455 0.00 0.00 36.81 3.85
2591 4262 3.709653 TGTTAGGTTTGACTGTGAGGTCT 59.290 43.478 0.00 0.00 37.16 3.85
2592 4263 2.918712 AGGTTTGACTGTGAGGTCTG 57.081 50.000 0.00 0.00 37.16 3.51
2593 4264 2.119495 AGGTTTGACTGTGAGGTCTGT 58.881 47.619 0.00 0.00 37.16 3.41
2594 4265 2.505819 AGGTTTGACTGTGAGGTCTGTT 59.494 45.455 0.00 0.00 37.16 3.16
2595 4266 3.054361 AGGTTTGACTGTGAGGTCTGTTT 60.054 43.478 0.00 0.00 37.16 2.83
2596 4267 3.065371 GGTTTGACTGTGAGGTCTGTTTG 59.935 47.826 0.00 0.00 37.16 2.93
2597 4268 2.620251 TGACTGTGAGGTCTGTTTGG 57.380 50.000 0.00 0.00 37.16 3.28
2598 4269 1.837439 TGACTGTGAGGTCTGTTTGGT 59.163 47.619 0.00 0.00 37.16 3.67
2599 4270 3.035363 TGACTGTGAGGTCTGTTTGGTA 58.965 45.455 0.00 0.00 37.16 3.25
2600 4271 3.646162 TGACTGTGAGGTCTGTTTGGTAT 59.354 43.478 0.00 0.00 37.16 2.73
2601 4272 4.102524 TGACTGTGAGGTCTGTTTGGTATT 59.897 41.667 0.00 0.00 37.16 1.89
2602 4273 5.305902 TGACTGTGAGGTCTGTTTGGTATTA 59.694 40.000 0.00 0.00 37.16 0.98
2603 4274 5.794894 ACTGTGAGGTCTGTTTGGTATTAG 58.205 41.667 0.00 0.00 0.00 1.73
2604 4275 5.160607 TGTGAGGTCTGTTTGGTATTAGG 57.839 43.478 0.00 0.00 0.00 2.69
2605 4276 3.939592 GTGAGGTCTGTTTGGTATTAGGC 59.060 47.826 0.00 0.00 0.00 3.93
2606 4277 3.054655 TGAGGTCTGTTTGGTATTAGGCC 60.055 47.826 0.00 0.00 35.18 5.19
2607 4278 2.241430 AGGTCTGTTTGGTATTAGGCCC 59.759 50.000 0.00 0.00 35.54 5.80
2608 4279 2.025699 GGTCTGTTTGGTATTAGGCCCA 60.026 50.000 0.00 0.00 0.00 5.36
2609 4280 3.279434 GTCTGTTTGGTATTAGGCCCAG 58.721 50.000 0.00 0.00 31.04 4.45
2610 4281 3.054655 GTCTGTTTGGTATTAGGCCCAGA 60.055 47.826 0.00 0.00 31.04 3.86
2611 4282 3.054655 TCTGTTTGGTATTAGGCCCAGAC 60.055 47.826 0.00 0.00 36.61 3.51
2612 4283 2.916934 TGTTTGGTATTAGGCCCAGACT 59.083 45.455 0.00 0.00 36.91 3.24
2613 4284 4.105577 TGTTTGGTATTAGGCCCAGACTA 58.894 43.478 0.00 0.00 36.91 2.59
2614 4285 4.724798 TGTTTGGTATTAGGCCCAGACTAT 59.275 41.667 0.00 0.00 36.91 2.12
2615 4286 5.163237 TGTTTGGTATTAGGCCCAGACTATC 60.163 44.000 0.00 0.00 36.91 2.08
2616 4287 4.207698 TGGTATTAGGCCCAGACTATCA 57.792 45.455 0.00 0.00 0.00 2.15
2617 4288 4.160329 TGGTATTAGGCCCAGACTATCAG 58.840 47.826 0.00 0.00 0.00 2.90
2618 4289 3.055747 GGTATTAGGCCCAGACTATCAGC 60.056 52.174 0.00 0.00 0.00 4.26
2619 4290 1.040646 TTAGGCCCAGACTATCAGCG 58.959 55.000 0.00 0.00 0.00 5.18
2620 4291 1.464376 TAGGCCCAGACTATCAGCGC 61.464 60.000 0.00 0.00 0.00 5.92
2621 4292 2.280457 GCCCAGACTATCAGCGCC 60.280 66.667 2.29 0.00 0.00 6.53
2622 4293 2.423446 CCCAGACTATCAGCGCCC 59.577 66.667 2.29 0.00 0.00 6.13
2623 4294 2.423446 CCAGACTATCAGCGCCCC 59.577 66.667 2.29 0.00 0.00 5.80
2624 4295 2.136878 CCAGACTATCAGCGCCCCT 61.137 63.158 2.29 0.00 0.00 4.79
2625 4296 1.690219 CCAGACTATCAGCGCCCCTT 61.690 60.000 2.29 0.00 0.00 3.95
2626 4297 0.249657 CAGACTATCAGCGCCCCTTC 60.250 60.000 2.29 0.00 0.00 3.46
2627 4298 0.687757 AGACTATCAGCGCCCCTTCA 60.688 55.000 2.29 0.00 0.00 3.02
2628 4299 0.394565 GACTATCAGCGCCCCTTCAT 59.605 55.000 2.29 0.00 0.00 2.57
2629 4300 0.394565 ACTATCAGCGCCCCTTCATC 59.605 55.000 2.29 0.00 0.00 2.92
2630 4301 0.394192 CTATCAGCGCCCCTTCATCA 59.606 55.000 2.29 0.00 0.00 3.07
2631 4302 0.394192 TATCAGCGCCCCTTCATCAG 59.606 55.000 2.29 0.00 0.00 2.90
2632 4303 1.630126 ATCAGCGCCCCTTCATCAGT 61.630 55.000 2.29 0.00 0.00 3.41
2633 4304 1.377725 CAGCGCCCCTTCATCAGTT 60.378 57.895 2.29 0.00 0.00 3.16
2634 4305 0.107703 CAGCGCCCCTTCATCAGTTA 60.108 55.000 2.29 0.00 0.00 2.24
2635 4306 0.179000 AGCGCCCCTTCATCAGTTAG 59.821 55.000 2.29 0.00 0.00 2.34
2636 4307 0.178068 GCGCCCCTTCATCAGTTAGA 59.822 55.000 0.00 0.00 0.00 2.10
2637 4308 1.202698 GCGCCCCTTCATCAGTTAGAT 60.203 52.381 0.00 0.00 37.48 1.98
2638 4309 2.037251 GCGCCCCTTCATCAGTTAGATA 59.963 50.000 0.00 0.00 34.43 1.98
2639 4310 3.862642 GCGCCCCTTCATCAGTTAGATAG 60.863 52.174 0.00 0.00 34.43 2.08
2640 4311 3.306364 CGCCCCTTCATCAGTTAGATAGG 60.306 52.174 0.00 0.00 34.43 2.57
2641 4312 3.904339 GCCCCTTCATCAGTTAGATAGGA 59.096 47.826 0.00 0.00 35.35 2.94
2642 4313 4.020662 GCCCCTTCATCAGTTAGATAGGAG 60.021 50.000 0.00 0.00 35.35 3.69
2643 4314 5.151454 CCCCTTCATCAGTTAGATAGGAGT 58.849 45.833 0.00 0.00 35.35 3.85
2644 4315 6.315714 CCCCTTCATCAGTTAGATAGGAGTA 58.684 44.000 0.00 0.00 35.35 2.59
2645 4316 6.435904 CCCCTTCATCAGTTAGATAGGAGTAG 59.564 46.154 0.00 0.00 35.35 2.57
2646 4317 6.071616 CCCTTCATCAGTTAGATAGGAGTAGC 60.072 46.154 0.00 0.00 35.35 3.58
2647 4318 6.348950 CCTTCATCAGTTAGATAGGAGTAGCG 60.349 46.154 0.00 0.00 35.35 4.26
2648 4319 5.866207 TCATCAGTTAGATAGGAGTAGCGA 58.134 41.667 0.00 0.00 34.43 4.93
2649 4320 5.701750 TCATCAGTTAGATAGGAGTAGCGAC 59.298 44.000 0.00 0.00 34.43 5.19
2650 4321 5.032327 TCAGTTAGATAGGAGTAGCGACA 57.968 43.478 0.00 0.00 0.00 4.35
2651 4322 5.057819 TCAGTTAGATAGGAGTAGCGACAG 58.942 45.833 0.00 0.00 0.00 3.51
2652 4323 5.057819 CAGTTAGATAGGAGTAGCGACAGA 58.942 45.833 0.00 0.00 0.00 3.41
2653 4324 5.178623 CAGTTAGATAGGAGTAGCGACAGAG 59.821 48.000 0.00 0.00 0.00 3.35
2654 4325 3.134574 AGATAGGAGTAGCGACAGAGG 57.865 52.381 0.00 0.00 0.00 3.69
2655 4326 2.440253 AGATAGGAGTAGCGACAGAGGT 59.560 50.000 0.00 0.00 0.00 3.85
2656 4327 2.803030 TAGGAGTAGCGACAGAGGTT 57.197 50.000 0.00 0.00 0.00 3.50
2657 4328 1.178276 AGGAGTAGCGACAGAGGTTG 58.822 55.000 0.00 0.00 0.00 3.77
2662 4333 3.159984 GCGACAGAGGTTGCGAAG 58.840 61.111 0.00 0.00 44.12 3.79
2663 4334 1.372997 GCGACAGAGGTTGCGAAGA 60.373 57.895 0.00 0.00 44.12 2.87
2664 4335 0.737715 GCGACAGAGGTTGCGAAGAT 60.738 55.000 0.00 0.00 44.12 2.40
2665 4336 0.994995 CGACAGAGGTTGCGAAGATG 59.005 55.000 0.00 0.00 0.00 2.90
2666 4337 1.363744 GACAGAGGTTGCGAAGATGG 58.636 55.000 0.00 0.00 0.00 3.51
2667 4338 0.687354 ACAGAGGTTGCGAAGATGGT 59.313 50.000 0.00 0.00 0.00 3.55
2668 4339 1.081892 CAGAGGTTGCGAAGATGGTG 58.918 55.000 0.00 0.00 0.00 4.17
2669 4340 0.036010 AGAGGTTGCGAAGATGGTGG 60.036 55.000 0.00 0.00 0.00 4.61
2670 4341 1.648467 GAGGTTGCGAAGATGGTGGC 61.648 60.000 0.00 0.00 0.00 5.01
2671 4342 1.675641 GGTTGCGAAGATGGTGGCT 60.676 57.895 0.00 0.00 0.00 4.75
2672 4343 1.244019 GGTTGCGAAGATGGTGGCTT 61.244 55.000 0.00 0.00 0.00 4.35
2673 4344 0.598065 GTTGCGAAGATGGTGGCTTT 59.402 50.000 0.00 0.00 0.00 3.51
2674 4345 0.597568 TTGCGAAGATGGTGGCTTTG 59.402 50.000 0.00 0.00 0.00 2.77
2675 4346 1.243342 TGCGAAGATGGTGGCTTTGG 61.243 55.000 0.00 0.00 0.00 3.28
2676 4347 1.244019 GCGAAGATGGTGGCTTTGGT 61.244 55.000 0.00 0.00 0.00 3.67
2677 4348 0.804989 CGAAGATGGTGGCTTTGGTC 59.195 55.000 0.00 0.00 0.00 4.02
2678 4349 1.611673 CGAAGATGGTGGCTTTGGTCT 60.612 52.381 0.00 0.00 0.00 3.85
2679 4350 2.519013 GAAGATGGTGGCTTTGGTCTT 58.481 47.619 0.00 0.00 0.00 3.01
2680 4351 3.686016 GAAGATGGTGGCTTTGGTCTTA 58.314 45.455 0.00 0.00 0.00 2.10
2681 4352 3.073274 AGATGGTGGCTTTGGTCTTAC 57.927 47.619 0.00 0.00 0.00 2.34
2682 4353 2.644798 AGATGGTGGCTTTGGTCTTACT 59.355 45.455 0.00 0.00 0.00 2.24
2683 4354 2.270352 TGGTGGCTTTGGTCTTACTG 57.730 50.000 0.00 0.00 0.00 2.74
2684 4355 1.493022 TGGTGGCTTTGGTCTTACTGT 59.507 47.619 0.00 0.00 0.00 3.55
2685 4356 2.092103 TGGTGGCTTTGGTCTTACTGTT 60.092 45.455 0.00 0.00 0.00 3.16
2686 4357 2.293399 GGTGGCTTTGGTCTTACTGTTG 59.707 50.000 0.00 0.00 0.00 3.33
2687 4358 2.949644 GTGGCTTTGGTCTTACTGTTGT 59.050 45.455 0.00 0.00 0.00 3.32
2688 4359 4.131596 GTGGCTTTGGTCTTACTGTTGTA 58.868 43.478 0.00 0.00 0.00 2.41
2689 4360 4.024302 GTGGCTTTGGTCTTACTGTTGTAC 60.024 45.833 0.00 0.00 0.00 2.90
2690 4361 3.185797 GGCTTTGGTCTTACTGTTGTACG 59.814 47.826 0.00 0.00 0.00 3.67
2691 4362 4.053295 GCTTTGGTCTTACTGTTGTACGA 58.947 43.478 0.00 0.00 0.00 3.43
2692 4363 4.084693 GCTTTGGTCTTACTGTTGTACGAC 60.085 45.833 6.27 6.27 43.16 4.34
2693 4364 4.924305 TTGGTCTTACTGTTGTACGACT 57.076 40.909 14.38 0.00 43.31 4.18
2694 4365 4.924305 TGGTCTTACTGTTGTACGACTT 57.076 40.909 14.38 4.26 43.31 3.01
2695 4366 5.266733 TGGTCTTACTGTTGTACGACTTT 57.733 39.130 14.38 3.93 43.31 2.66
2696 4367 5.045215 TGGTCTTACTGTTGTACGACTTTG 58.955 41.667 14.38 7.24 43.31 2.77
2697 4368 5.045872 GGTCTTACTGTTGTACGACTTTGT 58.954 41.667 14.38 12.01 43.31 2.83
2698 4369 6.183360 TGGTCTTACTGTTGTACGACTTTGTA 60.183 38.462 14.38 11.16 43.31 2.41
2699 4370 6.697019 GGTCTTACTGTTGTACGACTTTGTAA 59.303 38.462 14.38 16.43 43.31 2.41
2700 4371 7.096312 GGTCTTACTGTTGTACGACTTTGTAAG 60.096 40.741 26.64 26.64 43.31 2.34
2701 4372 6.919662 TCTTACTGTTGTACGACTTTGTAAGG 59.080 38.462 28.76 20.15 37.36 2.69
2702 4373 5.014808 ACTGTTGTACGACTTTGTAAGGT 57.985 39.130 14.38 0.00 0.00 3.50
2703 4374 5.045872 ACTGTTGTACGACTTTGTAAGGTC 58.954 41.667 14.38 0.00 0.00 3.85
2704 4375 5.163478 ACTGTTGTACGACTTTGTAAGGTCT 60.163 40.000 14.38 0.00 0.00 3.85
2705 4376 5.663456 TGTTGTACGACTTTGTAAGGTCTT 58.337 37.500 14.38 0.00 0.00 3.01
2706 4377 5.521010 TGTTGTACGACTTTGTAAGGTCTTG 59.479 40.000 14.38 0.00 0.00 3.02
2707 4378 5.266733 TGTACGACTTTGTAAGGTCTTGT 57.733 39.130 5.52 0.63 0.00 3.16
2708 4379 5.045215 TGTACGACTTTGTAAGGTCTTGTG 58.955 41.667 5.52 0.00 0.00 3.33
2709 4380 4.133013 ACGACTTTGTAAGGTCTTGTGT 57.867 40.909 5.52 0.00 0.00 3.72
2710 4381 4.510571 ACGACTTTGTAAGGTCTTGTGTT 58.489 39.130 5.52 0.00 0.00 3.32
2711 4382 5.663456 ACGACTTTGTAAGGTCTTGTGTTA 58.337 37.500 5.52 0.00 0.00 2.41
2712 4383 6.108015 ACGACTTTGTAAGGTCTTGTGTTAA 58.892 36.000 5.52 0.00 0.00 2.01
2713 4384 6.764560 ACGACTTTGTAAGGTCTTGTGTTAAT 59.235 34.615 5.52 0.00 0.00 1.40
2714 4385 7.927629 ACGACTTTGTAAGGTCTTGTGTTAATA 59.072 33.333 5.52 0.00 0.00 0.98
2715 4386 8.767085 CGACTTTGTAAGGTCTTGTGTTAATAA 58.233 33.333 5.52 0.00 0.00 1.40
2738 4409 9.801873 ATAATTAATAAATTGGCCGTATGCATC 57.198 29.630 0.19 0.00 37.85 3.91
2739 4410 3.829886 ATAAATTGGCCGTATGCATCG 57.170 42.857 0.19 7.03 43.89 3.84
2740 4411 1.388547 AAATTGGCCGTATGCATCGT 58.611 45.000 0.19 0.00 43.89 3.73
2741 4412 0.944386 AATTGGCCGTATGCATCGTC 59.056 50.000 0.19 0.00 43.89 4.20
2742 4413 0.884704 ATTGGCCGTATGCATCGTCC 60.885 55.000 0.19 7.07 43.89 4.79
2743 4414 2.108157 GGCCGTATGCATCGTCCA 59.892 61.111 0.19 0.00 43.89 4.02
2744 4415 1.956170 GGCCGTATGCATCGTCCAG 60.956 63.158 0.19 0.00 43.89 3.86
2745 4416 1.067416 GCCGTATGCATCGTCCAGA 59.933 57.895 0.19 0.00 40.77 3.86
2746 4417 0.319900 GCCGTATGCATCGTCCAGAT 60.320 55.000 0.19 0.00 41.01 2.90
2754 4425 1.445095 ATCGTCCAGATGCAGAGGC 59.555 57.895 0.00 0.00 38.36 4.70
2755 4426 2.037620 ATCGTCCAGATGCAGAGGCC 62.038 60.000 0.00 0.00 38.36 5.19
2756 4427 2.202987 GTCCAGATGCAGAGGCCG 60.203 66.667 0.00 0.00 40.13 6.13
2757 4428 3.473647 TCCAGATGCAGAGGCCGG 61.474 66.667 0.00 0.00 40.13 6.13
2758 4429 4.559063 CCAGATGCAGAGGCCGGG 62.559 72.222 2.18 0.00 40.13 5.73
2759 4430 4.559063 CAGATGCAGAGGCCGGGG 62.559 72.222 2.18 0.00 40.13 5.73
2765 4436 3.787001 CAGAGGCCGGGGGTCTTC 61.787 72.222 2.18 0.00 38.01 2.87
2775 4446 3.553109 GGGGTCTTCCTCCTTTTCG 57.447 57.895 0.00 0.00 35.33 3.46
2776 4447 0.981943 GGGGTCTTCCTCCTTTTCGA 59.018 55.000 0.00 0.00 35.33 3.71
2777 4448 1.350019 GGGGTCTTCCTCCTTTTCGAA 59.650 52.381 0.00 0.00 35.33 3.71
2778 4449 2.224695 GGGGTCTTCCTCCTTTTCGAAA 60.225 50.000 6.47 6.47 35.33 3.46
2779 4450 3.483421 GGGTCTTCCTCCTTTTCGAAAA 58.517 45.455 21.35 21.35 0.00 2.29
2780 4451 3.887110 GGGTCTTCCTCCTTTTCGAAAAA 59.113 43.478 22.67 9.49 0.00 1.94
2902 4573 5.355350 GTGGATCTTACAGAAAGGTGATTGG 59.645 44.000 0.00 0.00 35.75 3.16
3014 4685 7.053498 TGAATCTGACGATATGAATTTGGGAA 58.947 34.615 0.00 0.00 0.00 3.97
3022 4693 5.916883 CGATATGAATTTGGGAATGCTTCAC 59.083 40.000 0.00 0.00 0.00 3.18
3073 4744 5.957771 TTATCTTCCTATGGACACAAGCT 57.042 39.130 0.00 0.00 0.00 3.74
3133 4804 0.400594 ACTTGGGCCAGTTACCTGTC 59.599 55.000 6.23 0.00 36.95 3.51
3175 4847 0.246360 CTACACACCATGCTGGACGA 59.754 55.000 8.91 0.00 40.96 4.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 4.934602 GCCTAAGATCTAGATTGATGTGCC 59.065 45.833 6.70 0.00 0.00 5.01
46 47 2.168936 ACAACGGTACAACAAGAGGACA 59.831 45.455 0.00 0.00 0.00 4.02
54 55 3.002451 GTGCACATTACAACGGTACAACA 59.998 43.478 13.17 0.00 0.00 3.33
55 56 3.249080 AGTGCACATTACAACGGTACAAC 59.751 43.478 21.04 0.00 0.00 3.32
83 84 7.232118 TGTCTAGCAGTGTATATATGCATGT 57.768 36.000 10.16 5.06 42.45 3.21
108 109 6.560253 AATTGCGTCTATATTTCCATCCAC 57.440 37.500 0.00 0.00 0.00 4.02
111 112 8.083462 TGTGTAATTGCGTCTATATTTCCATC 57.917 34.615 0.00 0.00 0.00 3.51
113 114 7.045416 ACTGTGTAATTGCGTCTATATTTCCA 58.955 34.615 0.00 0.00 0.00 3.53
114 115 7.307219 GGACTGTGTAATTGCGTCTATATTTCC 60.307 40.741 0.00 0.00 0.00 3.13
116 117 7.045416 TGGACTGTGTAATTGCGTCTATATTT 58.955 34.615 0.00 0.00 0.00 1.40
131 132 6.844388 AGGGATCATATTAGTTGGACTGTGTA 59.156 38.462 0.00 0.00 0.00 2.90
137 138 9.220767 GTCAAATAGGGATCATATTAGTTGGAC 57.779 37.037 0.00 0.00 0.00 4.02
173 175 2.648304 TGGACCGGAGCTCCTATATACT 59.352 50.000 29.73 4.41 0.00 2.12
174 176 3.083122 TGGACCGGAGCTCCTATATAC 57.917 52.381 29.73 13.57 0.00 1.47
213 215 2.948315 GGATTTTCTCATGAGCAGACCC 59.052 50.000 18.36 11.80 0.00 4.46
217 219 6.093771 GGCATATAGGATTTTCTCATGAGCAG 59.906 42.308 18.36 0.00 0.00 4.24
244 248 0.453282 CACGACTCTTTGCGGCAATG 60.453 55.000 17.19 18.38 0.00 2.82
250 254 1.439365 GCAAGCACGACTCTTTGCG 60.439 57.895 0.00 0.00 43.87 4.85
267 271 1.003355 TGCTAGCTTGGTCCTGTGC 60.003 57.895 17.23 0.00 0.00 4.57
269 273 1.298014 GCTGCTAGCTTGGTCCTGT 59.702 57.895 17.23 0.00 38.45 4.00
273 279 1.964552 ATCATGCTGCTAGCTTGGTC 58.035 50.000 17.23 1.09 43.91 4.02
277 283 5.129980 TGCCTATATATCATGCTGCTAGCTT 59.870 40.000 17.23 0.00 42.97 3.74
285 291 3.713764 GGGGTCTGCCTATATATCATGCT 59.286 47.826 0.00 0.00 34.45 3.79
286 292 3.713764 AGGGGTCTGCCTATATATCATGC 59.286 47.826 0.00 0.00 34.45 4.06
297 303 0.329596 CTGCTAAAAGGGGTCTGCCT 59.670 55.000 0.00 0.00 34.45 4.75
318 324 1.294138 CGAAAACCCGGAGCACCTA 59.706 57.895 0.73 0.00 0.00 3.08
328 334 0.168128 CTCGCATGTTCCGAAAACCC 59.832 55.000 0.00 0.00 33.92 4.11
330 336 2.223377 ACTTCTCGCATGTTCCGAAAAC 59.777 45.455 0.00 0.00 33.92 2.43
337 343 2.408050 ACACAGACTTCTCGCATGTTC 58.592 47.619 0.00 0.00 0.00 3.18
341 347 3.062763 CTCAAACACAGACTTCTCGCAT 58.937 45.455 0.00 0.00 0.00 4.73
344 350 6.771188 AATAACTCAAACACAGACTTCTCG 57.229 37.500 0.00 0.00 0.00 4.04
352 358 7.547370 TCCAAAACCAAAATAACTCAAACACAG 59.453 33.333 0.00 0.00 0.00 3.66
353 359 7.386851 TCCAAAACCAAAATAACTCAAACACA 58.613 30.769 0.00 0.00 0.00 3.72
354 360 7.762159 TCTCCAAAACCAAAATAACTCAAACAC 59.238 33.333 0.00 0.00 0.00 3.32
359 365 6.133356 AGGTCTCCAAAACCAAAATAACTCA 58.867 36.000 0.00 0.00 39.39 3.41
361 367 6.609616 TGAAGGTCTCCAAAACCAAAATAACT 59.390 34.615 0.00 0.00 39.39 2.24
365 371 5.660864 TCTTGAAGGTCTCCAAAACCAAAAT 59.339 36.000 0.00 0.00 39.39 1.82
369 375 3.943671 TCTTGAAGGTCTCCAAAACCA 57.056 42.857 0.00 0.00 39.39 3.67
370 376 3.570125 CCTTCTTGAAGGTCTCCAAAACC 59.430 47.826 18.52 0.00 35.22 3.27
409 415 8.869109 TCCAGTAAAGGAAATCAACATGAAAAT 58.131 29.630 0.00 0.00 33.93 1.82
410 416 8.243961 TCCAGTAAAGGAAATCAACATGAAAA 57.756 30.769 0.00 0.00 33.93 2.29
505 513 4.571372 TTTGTACAAATCCGGAAACACC 57.429 40.909 17.01 0.00 0.00 4.16
506 514 7.471657 AAATTTTGTACAAATCCGGAAACAC 57.528 32.000 21.17 3.03 0.00 3.32
507 515 9.595823 TTAAAATTTTGTACAAATCCGGAAACA 57.404 25.926 21.17 5.52 0.00 2.83
539 547 7.609532 AGGGAACAATTTTTGAAAATGTGAACA 59.390 29.630 7.75 0.00 38.53 3.18
540 548 7.984391 AGGGAACAATTTTTGAAAATGTGAAC 58.016 30.769 7.75 0.58 38.53 3.18
543 551 9.636879 AAAAAGGGAACAATTTTTGAAAATGTG 57.363 25.926 2.71 6.27 37.37 3.21
596 606 9.489393 GAACAAAATTCGAAATTTCAAGCTTTT 57.511 25.926 17.99 13.16 0.00 2.27
600 610 7.397970 TGTGAACAAAATTCGAAATTTCAAGC 58.602 30.769 17.99 0.56 0.00 4.01
601 611 9.919348 ATTGTGAACAAAATTCGAAATTTCAAG 57.081 25.926 17.99 3.07 39.55 3.02
631 641 9.541143 ACAAGTTGAAATTCCGAACATTTAATT 57.459 25.926 10.54 0.00 0.00 1.40
632 642 9.541143 AACAAGTTGAAATTCCGAACATTTAAT 57.459 25.926 10.54 0.00 0.00 1.40
633 643 8.934507 AACAAGTTGAAATTCCGAACATTTAA 57.065 26.923 10.54 0.00 0.00 1.52
642 652 8.519492 AACATGAATAACAAGTTGAAATTCCG 57.481 30.769 21.43 17.27 38.67 4.30
673 684 8.608317 CGTGTTTTCTTAAAATTGGGAACATTT 58.392 29.630 0.00 0.00 42.32 2.32
674 685 7.766738 ACGTGTTTTCTTAAAATTGGGAACATT 59.233 29.630 0.00 0.00 42.32 2.71
675 686 7.269316 ACGTGTTTTCTTAAAATTGGGAACAT 58.731 30.769 0.00 0.00 42.32 2.71
676 687 6.631962 ACGTGTTTTCTTAAAATTGGGAACA 58.368 32.000 0.00 0.00 39.83 3.18
677 688 7.528481 AACGTGTTTTCTTAAAATTGGGAAC 57.472 32.000 0.00 0.00 32.22 3.62
679 690 8.083462 GGATAACGTGTTTTCTTAAAATTGGGA 58.917 33.333 0.00 0.00 32.22 4.37
680 691 7.868415 TGGATAACGTGTTTTCTTAAAATTGGG 59.132 33.333 0.00 0.00 32.22 4.12
681 692 8.804688 TGGATAACGTGTTTTCTTAAAATTGG 57.195 30.769 0.00 0.00 32.22 3.16
767 780 6.669125 TTGAAACATTCTTTGGATCCATGT 57.331 33.333 17.06 13.78 0.00 3.21
787 800 7.606349 AGCGAGATATGCAGTCTATAAATTGA 58.394 34.615 4.53 0.00 33.85 2.57
794 807 2.757868 GGGAGCGAGATATGCAGTCTAT 59.242 50.000 4.53 0.00 33.85 1.98
796 809 0.965439 GGGAGCGAGATATGCAGTCT 59.035 55.000 4.21 4.21 33.85 3.24
797 810 0.387878 CGGGAGCGAGATATGCAGTC 60.388 60.000 0.00 0.00 33.85 3.51
798 811 1.662608 CGGGAGCGAGATATGCAGT 59.337 57.895 0.00 0.00 33.85 4.40
799 812 4.567435 CGGGAGCGAGATATGCAG 57.433 61.111 0.00 0.00 33.85 4.41
856 893 0.595053 ATATCTGGTTCGTGAGCGCG 60.595 55.000 0.00 0.00 38.14 6.86
862 899 2.030457 GCGTTTGGATATCTGGTTCGTG 59.970 50.000 2.05 0.00 0.00 4.35
897 934 5.467735 AGTCTATTTCCTTTACGCGTGTTTT 59.532 36.000 24.59 0.00 0.00 2.43
898 935 4.992951 AGTCTATTTCCTTTACGCGTGTTT 59.007 37.500 24.59 0.00 0.00 2.83
900 937 3.924686 CAGTCTATTTCCTTTACGCGTGT 59.075 43.478 24.59 6.91 0.00 4.49
903 940 2.864343 CCCAGTCTATTTCCTTTACGCG 59.136 50.000 3.53 3.53 0.00 6.01
904 941 2.612672 GCCCAGTCTATTTCCTTTACGC 59.387 50.000 0.00 0.00 0.00 4.42
905 942 3.203716 GGCCCAGTCTATTTCCTTTACG 58.796 50.000 0.00 0.00 0.00 3.18
906 943 4.230745 TGGCCCAGTCTATTTCCTTTAC 57.769 45.455 0.00 0.00 0.00 2.01
907 944 4.325030 CCTTGGCCCAGTCTATTTCCTTTA 60.325 45.833 0.00 0.00 0.00 1.85
909 946 2.024941 CCTTGGCCCAGTCTATTTCCTT 60.025 50.000 0.00 0.00 0.00 3.36
922 983 4.410400 CTGACCGACCCTTGGCCC 62.410 72.222 0.00 0.00 0.00 5.80
931 992 3.982576 AACCACAAAATTCTGACCGAC 57.017 42.857 0.00 0.00 0.00 4.79
936 997 2.625790 CCCGGAAACCACAAAATTCTGA 59.374 45.455 0.73 0.00 32.39 3.27
979 1051 6.887486 TATATATTTGCACGTCCCAGCCGG 62.887 50.000 0.00 0.00 0.00 6.13
982 1054 8.712363 CATATATATATATTTGCACGTCCCAGC 58.288 37.037 11.83 0.00 0.00 4.85
983 1055 8.712363 GCATATATATATATTTGCACGTCCCAG 58.288 37.037 28.76 4.44 43.02 4.45
984 1056 8.207545 TGCATATATATATATTTGCACGTCCCA 58.792 33.333 30.86 16.59 45.84 4.37
985 1057 8.601845 TGCATATATATATATTTGCACGTCCC 57.398 34.615 30.86 13.30 45.84 4.46
1006 1105 0.107456 CGGTGGGATAGCTCTTGCAT 59.893 55.000 0.00 0.00 42.74 3.96
1025 1124 8.053026 AGGGAGTATGTAATGTATATGTCGAC 57.947 38.462 9.11 9.11 0.00 4.20
1040 1139 1.006281 TGTGGGACGTAGGGAGTATGT 59.994 52.381 0.00 0.00 33.18 2.29
1045 1144 4.342951 TGTTATATTGTGGGACGTAGGGAG 59.657 45.833 0.00 0.00 0.00 4.30
1047 1146 4.675976 TGTTATATTGTGGGACGTAGGG 57.324 45.455 0.00 0.00 0.00 3.53
1049 1148 7.962964 AATGATGTTATATTGTGGGACGTAG 57.037 36.000 0.00 0.00 0.00 3.51
1051 1150 7.639113 AAAATGATGTTATATTGTGGGACGT 57.361 32.000 0.00 0.00 0.00 4.34
1052 1151 8.187480 TGAAAAATGATGTTATATTGTGGGACG 58.813 33.333 0.00 0.00 0.00 4.79
1062 1161 8.495148 CGGACGATGATGAAAAATGATGTTATA 58.505 33.333 0.00 0.00 0.00 0.98
1064 1163 6.315144 ACGGACGATGATGAAAAATGATGTTA 59.685 34.615 0.00 0.00 0.00 2.41
1065 1164 5.123820 ACGGACGATGATGAAAAATGATGTT 59.876 36.000 0.00 0.00 0.00 2.71
1066 1165 4.635765 ACGGACGATGATGAAAAATGATGT 59.364 37.500 0.00 0.00 0.00 3.06
1068 1167 5.118990 AGACGGACGATGATGAAAAATGAT 58.881 37.500 0.00 0.00 0.00 2.45
1069 1168 4.503910 AGACGGACGATGATGAAAAATGA 58.496 39.130 0.00 0.00 0.00 2.57
1070 1169 4.568359 AGAGACGGACGATGATGAAAAATG 59.432 41.667 0.00 0.00 0.00 2.32
1071 1170 4.568359 CAGAGACGGACGATGATGAAAAAT 59.432 41.667 0.00 0.00 0.00 1.82
1072 1171 3.926527 CAGAGACGGACGATGATGAAAAA 59.073 43.478 0.00 0.00 0.00 1.94
1073 1172 3.056821 ACAGAGACGGACGATGATGAAAA 60.057 43.478 0.00 0.00 0.00 2.29
1074 1173 2.492088 ACAGAGACGGACGATGATGAAA 59.508 45.455 0.00 0.00 0.00 2.69
1075 1174 2.092323 ACAGAGACGGACGATGATGAA 58.908 47.619 0.00 0.00 0.00 2.57
1076 1175 1.751437 ACAGAGACGGACGATGATGA 58.249 50.000 0.00 0.00 0.00 2.92
1118 1221 0.186630 CCAGGGCCATGGATTGATCA 59.813 55.000 33.03 0.00 43.57 2.92
1324 1435 0.110486 GAAGAGCTTTGGTGGGTCCA 59.890 55.000 0.00 0.00 45.60 4.02
1512 3079 3.716195 CTCCATCCCGGTGCACCA 61.716 66.667 34.16 16.87 35.57 4.17
1578 3151 3.251729 GGAATATGGAGCACGTCGTAGTA 59.748 47.826 0.00 0.00 0.00 1.82
1799 3376 3.663198 AGATGGCTCCTTTCCAGTAGAT 58.337 45.455 0.00 0.00 36.98 1.98
2104 3771 4.588899 AGTACTTGTGCTCCATAATGCAA 58.411 39.130 0.00 0.00 41.10 4.08
2141 3812 3.744942 CAGATGGATGAAGATAAGGTGCG 59.255 47.826 0.00 0.00 0.00 5.34
2145 3816 9.736414 AAACATATCAGATGGATGAAGATAAGG 57.264 33.333 0.81 0.00 36.72 2.69
2192 3863 6.018994 GGCGATTTAATCACTTCATACGAACT 60.019 38.462 5.76 0.00 0.00 3.01
2241 3912 8.101309 TGATTTCCCTAGATGAAGATTGGTAA 57.899 34.615 0.00 0.00 0.00 2.85
2346 4017 2.841881 TCCTACACCCACTCCCATTTAC 59.158 50.000 0.00 0.00 0.00 2.01
2347 4018 3.208570 TCCTACACCCACTCCCATTTA 57.791 47.619 0.00 0.00 0.00 1.40
2348 4019 2.053747 TCCTACACCCACTCCCATTT 57.946 50.000 0.00 0.00 0.00 2.32
2349 4020 1.846439 CATCCTACACCCACTCCCATT 59.154 52.381 0.00 0.00 0.00 3.16
2350 4021 1.511613 CATCCTACACCCACTCCCAT 58.488 55.000 0.00 0.00 0.00 4.00
2351 4022 0.620410 CCATCCTACACCCACTCCCA 60.620 60.000 0.00 0.00 0.00 4.37
2352 4023 0.620700 ACCATCCTACACCCACTCCC 60.621 60.000 0.00 0.00 0.00 4.30
2353 4024 0.541863 CACCATCCTACACCCACTCC 59.458 60.000 0.00 0.00 0.00 3.85
2354 4025 0.541863 CCACCATCCTACACCCACTC 59.458 60.000 0.00 0.00 0.00 3.51
2355 4026 1.562672 GCCACCATCCTACACCCACT 61.563 60.000 0.00 0.00 0.00 4.00
2356 4027 1.077716 GCCACCATCCTACACCCAC 60.078 63.158 0.00 0.00 0.00 4.61
2357 4028 2.665089 CGCCACCATCCTACACCCA 61.665 63.158 0.00 0.00 0.00 4.51
2358 4029 2.189521 CGCCACCATCCTACACCC 59.810 66.667 0.00 0.00 0.00 4.61
2359 4030 2.513897 GCGCCACCATCCTACACC 60.514 66.667 0.00 0.00 0.00 4.16
2360 4031 1.815421 CAGCGCCACCATCCTACAC 60.815 63.158 2.29 0.00 0.00 2.90
2361 4032 1.836999 AACAGCGCCACCATCCTACA 61.837 55.000 2.29 0.00 0.00 2.74
2362 4033 0.676782 AAACAGCGCCACCATCCTAC 60.677 55.000 2.29 0.00 0.00 3.18
2363 4034 0.676466 CAAACAGCGCCACCATCCTA 60.676 55.000 2.29 0.00 0.00 2.94
2364 4035 1.973281 CAAACAGCGCCACCATCCT 60.973 57.895 2.29 0.00 0.00 3.24
2365 4036 2.568090 CAAACAGCGCCACCATCC 59.432 61.111 2.29 0.00 0.00 3.51
2366 4037 2.568090 CCAAACAGCGCCACCATC 59.432 61.111 2.29 0.00 0.00 3.51
2367 4038 3.683937 GCCAAACAGCGCCACCAT 61.684 61.111 2.29 0.00 0.00 3.55
2375 4046 4.683334 GCCACGACGCCAAACAGC 62.683 66.667 0.00 0.00 0.00 4.40
2376 4047 4.368808 CGCCACGACGCCAAACAG 62.369 66.667 0.00 0.00 0.00 3.16
2392 4063 4.193334 TCTCTGCCATCGACGCCG 62.193 66.667 4.01 0.00 37.07 6.46
2393 4064 2.279120 CTCTCTGCCATCGACGCC 60.279 66.667 4.01 0.00 0.00 5.68
2394 4065 1.587613 GTCTCTCTGCCATCGACGC 60.588 63.158 0.00 0.00 0.00 5.19
2395 4066 1.064946 GGTCTCTCTGCCATCGACG 59.935 63.158 0.00 0.00 0.00 5.12
2396 4067 0.102120 CAGGTCTCTCTGCCATCGAC 59.898 60.000 0.00 0.00 0.00 4.20
2397 4068 1.039785 CCAGGTCTCTCTGCCATCGA 61.040 60.000 0.00 0.00 33.64 3.59
2398 4069 1.440893 CCAGGTCTCTCTGCCATCG 59.559 63.158 0.00 0.00 33.64 3.84
2399 4070 1.145819 GCCAGGTCTCTCTGCCATC 59.854 63.158 0.00 0.00 33.64 3.51
2400 4071 1.614525 TGCCAGGTCTCTCTGCCAT 60.615 57.895 0.00 0.00 33.64 4.40
2401 4072 2.203832 TGCCAGGTCTCTCTGCCA 60.204 61.111 0.00 0.00 33.64 4.92
2402 4073 2.267324 GTGCCAGGTCTCTCTGCC 59.733 66.667 0.00 0.00 33.64 4.85
2403 4074 2.125753 CGTGCCAGGTCTCTCTGC 60.126 66.667 0.00 0.00 33.64 4.26
2404 4075 1.821061 AACCGTGCCAGGTCTCTCTG 61.821 60.000 0.40 0.00 45.21 3.35
2405 4076 1.534235 AACCGTGCCAGGTCTCTCT 60.534 57.895 0.40 0.00 45.21 3.10
2406 4077 1.079750 GAACCGTGCCAGGTCTCTC 60.080 63.158 0.40 0.00 45.21 3.20
2407 4078 1.194781 ATGAACCGTGCCAGGTCTCT 61.195 55.000 0.40 0.00 45.21 3.10
2408 4079 1.021390 CATGAACCGTGCCAGGTCTC 61.021 60.000 0.40 2.80 45.21 3.36
2409 4080 1.003355 CATGAACCGTGCCAGGTCT 60.003 57.895 0.40 0.00 45.21 3.85
2410 4081 2.690778 GCATGAACCGTGCCAGGTC 61.691 63.158 0.00 0.00 45.21 3.85
2411 4082 2.974692 TTGCATGAACCGTGCCAGGT 62.975 55.000 0.00 0.00 44.81 4.00
2412 4083 2.267351 TTGCATGAACCGTGCCAGG 61.267 57.895 0.00 0.00 44.81 4.45
2413 4084 1.081242 GTTGCATGAACCGTGCCAG 60.081 57.895 0.00 0.00 44.81 4.85
2414 4085 1.794151 CTGTTGCATGAACCGTGCCA 61.794 55.000 0.00 0.52 44.81 4.92
2415 4086 1.081242 CTGTTGCATGAACCGTGCC 60.081 57.895 0.00 0.00 44.81 5.01
2416 4087 0.871722 TACTGTTGCATGAACCGTGC 59.128 50.000 0.00 4.34 45.53 5.34
2417 4088 1.870402 TGTACTGTTGCATGAACCGTG 59.130 47.619 0.00 0.00 34.25 4.94
2418 4089 2.143122 CTGTACTGTTGCATGAACCGT 58.857 47.619 0.00 3.85 36.18 4.83
2419 4090 1.135972 GCTGTACTGTTGCATGAACCG 60.136 52.381 0.00 0.00 33.07 4.44
2420 4091 2.154462 AGCTGTACTGTTGCATGAACC 58.846 47.619 0.00 0.00 33.07 3.62
2421 4092 3.070018 AGAGCTGTACTGTTGCATGAAC 58.930 45.455 0.00 0.00 34.84 3.18
2422 4093 3.069289 CAGAGCTGTACTGTTGCATGAA 58.931 45.455 0.00 0.00 0.00 2.57
2423 4094 2.299867 TCAGAGCTGTACTGTTGCATGA 59.700 45.455 0.00 3.95 36.81 3.07
2424 4095 2.691927 TCAGAGCTGTACTGTTGCATG 58.308 47.619 0.00 0.00 36.81 4.06
2425 4096 3.007290 TCTTCAGAGCTGTACTGTTGCAT 59.993 43.478 0.00 0.00 36.81 3.96
2426 4097 2.365293 TCTTCAGAGCTGTACTGTTGCA 59.635 45.455 0.00 0.00 36.81 4.08
2427 4098 3.032017 TCTTCAGAGCTGTACTGTTGC 57.968 47.619 0.00 0.00 36.81 4.17
2428 4099 3.931468 CCATCTTCAGAGCTGTACTGTTG 59.069 47.826 0.00 0.00 36.81 3.33
2429 4100 3.834813 TCCATCTTCAGAGCTGTACTGTT 59.165 43.478 0.00 0.00 36.81 3.16
2430 4101 3.435275 TCCATCTTCAGAGCTGTACTGT 58.565 45.455 0.00 0.00 36.81 3.55
2431 4102 4.669206 ATCCATCTTCAGAGCTGTACTG 57.331 45.455 0.00 0.00 36.80 2.74
2432 4103 4.713814 TCAATCCATCTTCAGAGCTGTACT 59.286 41.667 0.00 0.00 0.00 2.73
2433 4104 5.016051 TCAATCCATCTTCAGAGCTGTAC 57.984 43.478 0.00 0.00 0.00 2.90
2434 4105 5.454329 CCATCAATCCATCTTCAGAGCTGTA 60.454 44.000 0.00 0.00 0.00 2.74
2435 4106 4.452825 CATCAATCCATCTTCAGAGCTGT 58.547 43.478 0.00 0.00 0.00 4.40
2436 4107 3.815962 CCATCAATCCATCTTCAGAGCTG 59.184 47.826 0.00 0.00 0.00 4.24
2437 4108 3.458857 ACCATCAATCCATCTTCAGAGCT 59.541 43.478 0.00 0.00 0.00 4.09
2438 4109 3.818180 ACCATCAATCCATCTTCAGAGC 58.182 45.455 0.00 0.00 0.00 4.09
2439 4110 4.987285 CGTACCATCAATCCATCTTCAGAG 59.013 45.833 0.00 0.00 0.00 3.35
2440 4111 4.405680 ACGTACCATCAATCCATCTTCAGA 59.594 41.667 0.00 0.00 0.00 3.27
2441 4112 4.509230 CACGTACCATCAATCCATCTTCAG 59.491 45.833 0.00 0.00 0.00 3.02
2442 4113 4.441792 CACGTACCATCAATCCATCTTCA 58.558 43.478 0.00 0.00 0.00 3.02
2443 4114 3.809832 CCACGTACCATCAATCCATCTTC 59.190 47.826 0.00 0.00 0.00 2.87
2444 4115 3.808728 CCACGTACCATCAATCCATCTT 58.191 45.455 0.00 0.00 0.00 2.40
2445 4116 2.485479 GCCACGTACCATCAATCCATCT 60.485 50.000 0.00 0.00 0.00 2.90
2446 4117 1.873591 GCCACGTACCATCAATCCATC 59.126 52.381 0.00 0.00 0.00 3.51
2447 4118 1.490490 AGCCACGTACCATCAATCCAT 59.510 47.619 0.00 0.00 0.00 3.41
2448 4119 0.908910 AGCCACGTACCATCAATCCA 59.091 50.000 0.00 0.00 0.00 3.41
2449 4120 1.299541 CAGCCACGTACCATCAATCC 58.700 55.000 0.00 0.00 0.00 3.01
2450 4121 0.657840 GCAGCCACGTACCATCAATC 59.342 55.000 0.00 0.00 0.00 2.67
2451 4122 1.089481 CGCAGCCACGTACCATCAAT 61.089 55.000 0.00 0.00 0.00 2.57
2452 4123 1.739929 CGCAGCCACGTACCATCAA 60.740 57.895 0.00 0.00 0.00 2.57
2453 4124 2.125713 CGCAGCCACGTACCATCA 60.126 61.111 0.00 0.00 0.00 3.07
2454 4125 2.890474 CCGCAGCCACGTACCATC 60.890 66.667 0.00 0.00 0.00 3.51
2488 4159 1.492993 GCTCTTCAACCAGGACCCCT 61.493 60.000 0.00 0.00 0.00 4.79
2489 4160 1.002011 GCTCTTCAACCAGGACCCC 60.002 63.158 0.00 0.00 0.00 4.95
2490 4161 0.606673 GTGCTCTTCAACCAGGACCC 60.607 60.000 0.00 0.00 0.00 4.46
2491 4162 0.951040 CGTGCTCTTCAACCAGGACC 60.951 60.000 0.00 0.00 0.00 4.46
2492 4163 1.569479 GCGTGCTCTTCAACCAGGAC 61.569 60.000 0.00 0.00 0.00 3.85
2493 4164 1.301716 GCGTGCTCTTCAACCAGGA 60.302 57.895 0.00 0.00 0.00 3.86
2494 4165 2.328099 GGCGTGCTCTTCAACCAGG 61.328 63.158 0.00 0.00 0.00 4.45
2495 4166 2.671177 CGGCGTGCTCTTCAACCAG 61.671 63.158 0.00 0.00 0.00 4.00
2496 4167 2.664851 CGGCGTGCTCTTCAACCA 60.665 61.111 0.00 0.00 0.00 3.67
2497 4168 3.423154 CCGGCGTGCTCTTCAACC 61.423 66.667 6.01 0.00 0.00 3.77
2498 4169 2.357034 TCCGGCGTGCTCTTCAAC 60.357 61.111 6.01 0.00 0.00 3.18
2499 4170 2.357034 GTCCGGCGTGCTCTTCAA 60.357 61.111 6.01 0.00 0.00 2.69
2500 4171 3.303135 AGTCCGGCGTGCTCTTCA 61.303 61.111 6.01 0.00 0.00 3.02
2501 4172 2.811317 CAGTCCGGCGTGCTCTTC 60.811 66.667 6.01 0.00 0.00 2.87
2502 4173 4.379243 CCAGTCCGGCGTGCTCTT 62.379 66.667 6.01 0.00 0.00 2.85
2527 4198 4.910585 GACGCCTGCCGGGTATGG 62.911 72.222 2.18 0.00 42.52 2.74
2528 4199 4.910585 GGACGCCTGCCGGGTATG 62.911 72.222 2.18 0.00 42.52 2.39
2538 4209 3.637273 GTCCCAACCAGGACGCCT 61.637 66.667 0.00 0.00 46.57 5.52
2554 4225 4.949121 ACCTAACATCTAAGACCTGAGGT 58.051 43.478 2.41 2.41 39.44 3.85
2555 4226 5.941555 AACCTAACATCTAAGACCTGAGG 57.058 43.478 0.00 0.00 0.00 3.86
2556 4227 6.814146 GTCAAACCTAACATCTAAGACCTGAG 59.186 42.308 0.00 0.00 0.00 3.35
2557 4228 6.497259 AGTCAAACCTAACATCTAAGACCTGA 59.503 38.462 0.00 0.00 0.00 3.86
2558 4229 6.591834 CAGTCAAACCTAACATCTAAGACCTG 59.408 42.308 0.00 0.00 0.00 4.00
2559 4230 6.270231 ACAGTCAAACCTAACATCTAAGACCT 59.730 38.462 0.00 0.00 0.00 3.85
2560 4231 6.369065 CACAGTCAAACCTAACATCTAAGACC 59.631 42.308 0.00 0.00 0.00 3.85
2561 4232 7.152645 TCACAGTCAAACCTAACATCTAAGAC 58.847 38.462 0.00 0.00 0.00 3.01
2562 4233 7.297936 TCACAGTCAAACCTAACATCTAAGA 57.702 36.000 0.00 0.00 0.00 2.10
2563 4234 6.591834 CCTCACAGTCAAACCTAACATCTAAG 59.408 42.308 0.00 0.00 0.00 2.18
2564 4235 6.042781 ACCTCACAGTCAAACCTAACATCTAA 59.957 38.462 0.00 0.00 0.00 2.10
2565 4236 5.542635 ACCTCACAGTCAAACCTAACATCTA 59.457 40.000 0.00 0.00 0.00 1.98
2566 4237 4.348168 ACCTCACAGTCAAACCTAACATCT 59.652 41.667 0.00 0.00 0.00 2.90
2567 4238 4.642429 ACCTCACAGTCAAACCTAACATC 58.358 43.478 0.00 0.00 0.00 3.06
2568 4239 4.348168 AGACCTCACAGTCAAACCTAACAT 59.652 41.667 0.00 0.00 39.34 2.71
2569 4240 3.709653 AGACCTCACAGTCAAACCTAACA 59.290 43.478 0.00 0.00 39.34 2.41
2570 4241 4.058817 CAGACCTCACAGTCAAACCTAAC 58.941 47.826 0.00 0.00 39.34 2.34
2571 4242 3.709653 ACAGACCTCACAGTCAAACCTAA 59.290 43.478 0.00 0.00 39.34 2.69
2572 4243 3.305720 ACAGACCTCACAGTCAAACCTA 58.694 45.455 0.00 0.00 39.34 3.08
2573 4244 2.119495 ACAGACCTCACAGTCAAACCT 58.881 47.619 0.00 0.00 39.34 3.50
2574 4245 2.622064 ACAGACCTCACAGTCAAACC 57.378 50.000 0.00 0.00 39.34 3.27
2575 4246 3.065371 CCAAACAGACCTCACAGTCAAAC 59.935 47.826 0.00 0.00 39.34 2.93
2576 4247 3.278574 CCAAACAGACCTCACAGTCAAA 58.721 45.455 0.00 0.00 39.34 2.69
2577 4248 2.238646 ACCAAACAGACCTCACAGTCAA 59.761 45.455 0.00 0.00 39.34 3.18
2578 4249 1.837439 ACCAAACAGACCTCACAGTCA 59.163 47.619 0.00 0.00 39.34 3.41
2579 4250 2.622064 ACCAAACAGACCTCACAGTC 57.378 50.000 0.00 0.00 37.01 3.51
2580 4251 4.706842 AATACCAAACAGACCTCACAGT 57.293 40.909 0.00 0.00 0.00 3.55
2581 4252 5.178797 CCTAATACCAAACAGACCTCACAG 58.821 45.833 0.00 0.00 0.00 3.66
2582 4253 4.564821 GCCTAATACCAAACAGACCTCACA 60.565 45.833 0.00 0.00 0.00 3.58
2583 4254 3.939592 GCCTAATACCAAACAGACCTCAC 59.060 47.826 0.00 0.00 0.00 3.51
2584 4255 3.054655 GGCCTAATACCAAACAGACCTCA 60.055 47.826 0.00 0.00 0.00 3.86
2585 4256 3.542648 GGCCTAATACCAAACAGACCTC 58.457 50.000 0.00 0.00 0.00 3.85
2586 4257 2.241430 GGGCCTAATACCAAACAGACCT 59.759 50.000 0.84 0.00 0.00 3.85
2587 4258 2.025699 TGGGCCTAATACCAAACAGACC 60.026 50.000 4.53 0.00 32.89 3.85
2588 4259 3.054655 TCTGGGCCTAATACCAAACAGAC 60.055 47.826 4.53 0.00 36.09 3.51
2589 4260 3.054655 GTCTGGGCCTAATACCAAACAGA 60.055 47.826 4.53 0.00 36.09 3.41
2590 4261 3.054361 AGTCTGGGCCTAATACCAAACAG 60.054 47.826 4.53 0.00 36.09 3.16
2591 4262 2.916934 AGTCTGGGCCTAATACCAAACA 59.083 45.455 4.53 0.00 36.09 2.83
2592 4263 3.646736 AGTCTGGGCCTAATACCAAAC 57.353 47.619 4.53 0.00 36.09 2.93
2593 4264 4.972568 TGATAGTCTGGGCCTAATACCAAA 59.027 41.667 4.53 0.00 36.09 3.28
2594 4265 4.562767 TGATAGTCTGGGCCTAATACCAA 58.437 43.478 4.53 0.00 36.09 3.67
2595 4266 4.160329 CTGATAGTCTGGGCCTAATACCA 58.840 47.826 4.53 0.00 35.05 3.25
2596 4267 3.055747 GCTGATAGTCTGGGCCTAATACC 60.056 52.174 4.53 0.00 0.00 2.73
2597 4268 3.367498 CGCTGATAGTCTGGGCCTAATAC 60.367 52.174 4.53 0.00 0.00 1.89
2598 4269 2.826128 CGCTGATAGTCTGGGCCTAATA 59.174 50.000 4.53 0.00 0.00 0.98
2599 4270 1.620819 CGCTGATAGTCTGGGCCTAAT 59.379 52.381 4.53 0.00 0.00 1.73
2600 4271 1.040646 CGCTGATAGTCTGGGCCTAA 58.959 55.000 4.53 0.00 0.00 2.69
2601 4272 1.464376 GCGCTGATAGTCTGGGCCTA 61.464 60.000 4.53 0.00 44.44 3.93
2602 4273 2.801631 GCGCTGATAGTCTGGGCCT 61.802 63.158 4.53 0.00 44.44 5.19
2603 4274 2.280457 GCGCTGATAGTCTGGGCC 60.280 66.667 0.00 0.00 44.44 5.80
2605 4276 2.423446 GGGCGCTGATAGTCTGGG 59.577 66.667 7.64 0.00 0.00 4.45
2606 4277 1.690219 AAGGGGCGCTGATAGTCTGG 61.690 60.000 7.64 0.00 0.00 3.86
2607 4278 0.249657 GAAGGGGCGCTGATAGTCTG 60.250 60.000 7.64 0.00 0.00 3.51
2608 4279 0.687757 TGAAGGGGCGCTGATAGTCT 60.688 55.000 7.64 0.00 0.00 3.24
2609 4280 0.394565 ATGAAGGGGCGCTGATAGTC 59.605 55.000 7.64 0.00 0.00 2.59
2610 4281 0.394565 GATGAAGGGGCGCTGATAGT 59.605 55.000 7.64 0.00 0.00 2.12
2611 4282 0.394192 TGATGAAGGGGCGCTGATAG 59.606 55.000 7.64 0.00 0.00 2.08
2612 4283 0.394192 CTGATGAAGGGGCGCTGATA 59.606 55.000 7.64 0.00 0.00 2.15
2613 4284 1.147824 CTGATGAAGGGGCGCTGAT 59.852 57.895 7.64 0.00 0.00 2.90
2614 4285 1.841302 AACTGATGAAGGGGCGCTGA 61.841 55.000 7.64 0.00 0.00 4.26
2615 4286 0.107703 TAACTGATGAAGGGGCGCTG 60.108 55.000 7.64 0.00 0.00 5.18
2616 4287 0.179000 CTAACTGATGAAGGGGCGCT 59.821 55.000 7.64 0.00 0.00 5.92
2617 4288 0.178068 TCTAACTGATGAAGGGGCGC 59.822 55.000 0.00 0.00 0.00 6.53
2618 4289 2.918712 ATCTAACTGATGAAGGGGCG 57.081 50.000 0.00 0.00 33.43 6.13
2619 4290 3.904339 TCCTATCTAACTGATGAAGGGGC 59.096 47.826 0.00 0.00 33.64 5.80
2620 4291 5.151454 ACTCCTATCTAACTGATGAAGGGG 58.849 45.833 0.00 0.00 37.40 4.79
2621 4292 6.071616 GCTACTCCTATCTAACTGATGAAGGG 60.072 46.154 0.00 0.00 33.64 3.95
2622 4293 6.348950 CGCTACTCCTATCTAACTGATGAAGG 60.349 46.154 0.00 0.00 36.65 3.46
2623 4294 6.428465 TCGCTACTCCTATCTAACTGATGAAG 59.572 42.308 0.00 0.00 36.65 3.02
2624 4295 6.205076 GTCGCTACTCCTATCTAACTGATGAA 59.795 42.308 0.00 0.00 36.65 2.57
2625 4296 5.701750 GTCGCTACTCCTATCTAACTGATGA 59.298 44.000 0.00 0.00 36.65 2.92
2626 4297 5.470437 TGTCGCTACTCCTATCTAACTGATG 59.530 44.000 0.00 0.00 36.65 3.07
2627 4298 5.622180 TGTCGCTACTCCTATCTAACTGAT 58.378 41.667 0.00 0.00 39.11 2.90
2628 4299 5.032327 TGTCGCTACTCCTATCTAACTGA 57.968 43.478 0.00 0.00 0.00 3.41
2629 4300 5.057819 TCTGTCGCTACTCCTATCTAACTG 58.942 45.833 0.00 0.00 0.00 3.16
2630 4301 5.293319 TCTGTCGCTACTCCTATCTAACT 57.707 43.478 0.00 0.00 0.00 2.24
2631 4302 4.453136 CCTCTGTCGCTACTCCTATCTAAC 59.547 50.000 0.00 0.00 0.00 2.34
2632 4303 4.102838 ACCTCTGTCGCTACTCCTATCTAA 59.897 45.833 0.00 0.00 0.00 2.10
2633 4304 3.647113 ACCTCTGTCGCTACTCCTATCTA 59.353 47.826 0.00 0.00 0.00 1.98
2634 4305 2.440253 ACCTCTGTCGCTACTCCTATCT 59.560 50.000 0.00 0.00 0.00 1.98
2635 4306 2.853705 ACCTCTGTCGCTACTCCTATC 58.146 52.381 0.00 0.00 0.00 2.08
2636 4307 2.952978 CAACCTCTGTCGCTACTCCTAT 59.047 50.000 0.00 0.00 0.00 2.57
2637 4308 2.366533 CAACCTCTGTCGCTACTCCTA 58.633 52.381 0.00 0.00 0.00 2.94
2638 4309 1.178276 CAACCTCTGTCGCTACTCCT 58.822 55.000 0.00 0.00 0.00 3.69
2639 4310 0.458716 GCAACCTCTGTCGCTACTCC 60.459 60.000 0.00 0.00 0.00 3.85
2640 4311 0.798771 CGCAACCTCTGTCGCTACTC 60.799 60.000 0.00 0.00 0.00 2.59
2641 4312 1.213013 CGCAACCTCTGTCGCTACT 59.787 57.895 0.00 0.00 0.00 2.57
2642 4313 0.388134 TTCGCAACCTCTGTCGCTAC 60.388 55.000 0.00 0.00 0.00 3.58
2643 4314 0.109272 CTTCGCAACCTCTGTCGCTA 60.109 55.000 0.00 0.00 0.00 4.26
2644 4315 1.373497 CTTCGCAACCTCTGTCGCT 60.373 57.895 0.00 0.00 0.00 4.93
2645 4316 0.737715 ATCTTCGCAACCTCTGTCGC 60.738 55.000 0.00 0.00 0.00 5.19
2646 4317 0.994995 CATCTTCGCAACCTCTGTCG 59.005 55.000 0.00 0.00 0.00 4.35
2647 4318 1.338200 ACCATCTTCGCAACCTCTGTC 60.338 52.381 0.00 0.00 0.00 3.51
2648 4319 0.687354 ACCATCTTCGCAACCTCTGT 59.313 50.000 0.00 0.00 0.00 3.41
2649 4320 1.081892 CACCATCTTCGCAACCTCTG 58.918 55.000 0.00 0.00 0.00 3.35
2650 4321 0.036010 CCACCATCTTCGCAACCTCT 60.036 55.000 0.00 0.00 0.00 3.69
2651 4322 1.648467 GCCACCATCTTCGCAACCTC 61.648 60.000 0.00 0.00 0.00 3.85
2652 4323 1.675641 GCCACCATCTTCGCAACCT 60.676 57.895 0.00 0.00 0.00 3.50
2653 4324 1.244019 AAGCCACCATCTTCGCAACC 61.244 55.000 0.00 0.00 0.00 3.77
2654 4325 0.598065 AAAGCCACCATCTTCGCAAC 59.402 50.000 0.00 0.00 0.00 4.17
2655 4326 0.597568 CAAAGCCACCATCTTCGCAA 59.402 50.000 0.00 0.00 0.00 4.85
2656 4327 1.243342 CCAAAGCCACCATCTTCGCA 61.243 55.000 0.00 0.00 0.00 5.10
2657 4328 1.244019 ACCAAAGCCACCATCTTCGC 61.244 55.000 0.00 0.00 0.00 4.70
2658 4329 0.804989 GACCAAAGCCACCATCTTCG 59.195 55.000 0.00 0.00 0.00 3.79
2659 4330 2.206576 AGACCAAAGCCACCATCTTC 57.793 50.000 0.00 0.00 0.00 2.87
2660 4331 2.683211 AAGACCAAAGCCACCATCTT 57.317 45.000 0.00 0.00 0.00 2.40
2661 4332 2.644798 AGTAAGACCAAAGCCACCATCT 59.355 45.455 0.00 0.00 0.00 2.90
2662 4333 2.749621 CAGTAAGACCAAAGCCACCATC 59.250 50.000 0.00 0.00 0.00 3.51
2663 4334 2.108250 ACAGTAAGACCAAAGCCACCAT 59.892 45.455 0.00 0.00 0.00 3.55
2664 4335 1.493022 ACAGTAAGACCAAAGCCACCA 59.507 47.619 0.00 0.00 0.00 4.17
2665 4336 2.271944 ACAGTAAGACCAAAGCCACC 57.728 50.000 0.00 0.00 0.00 4.61
2666 4337 2.949644 ACAACAGTAAGACCAAAGCCAC 59.050 45.455 0.00 0.00 0.00 5.01
2667 4338 3.290948 ACAACAGTAAGACCAAAGCCA 57.709 42.857 0.00 0.00 0.00 4.75
2668 4339 3.185797 CGTACAACAGTAAGACCAAAGCC 59.814 47.826 0.00 0.00 0.00 4.35
2669 4340 4.053295 TCGTACAACAGTAAGACCAAAGC 58.947 43.478 0.00 0.00 0.00 3.51
2670 4341 5.287226 AGTCGTACAACAGTAAGACCAAAG 58.713 41.667 14.87 0.00 43.63 2.77
2671 4342 5.266733 AGTCGTACAACAGTAAGACCAAA 57.733 39.130 14.87 0.00 43.63 3.28
2672 4343 4.924305 AGTCGTACAACAGTAAGACCAA 57.076 40.909 14.87 0.00 43.63 3.67
2673 4344 4.924305 AAGTCGTACAACAGTAAGACCA 57.076 40.909 14.87 0.00 43.63 4.02
2674 4345 5.045872 ACAAAGTCGTACAACAGTAAGACC 58.954 41.667 14.87 2.34 43.63 3.85
2675 4346 7.096312 CCTTACAAAGTCGTACAACAGTAAGAC 60.096 40.741 17.98 11.88 43.23 3.01
2676 4347 6.919662 CCTTACAAAGTCGTACAACAGTAAGA 59.080 38.462 17.98 0.00 39.45 2.10
2677 4348 6.698766 ACCTTACAAAGTCGTACAACAGTAAG 59.301 38.462 12.97 12.97 37.80 2.34
2678 4349 6.572519 ACCTTACAAAGTCGTACAACAGTAA 58.427 36.000 0.00 0.00 0.00 2.24
2679 4350 6.039717 AGACCTTACAAAGTCGTACAACAGTA 59.960 38.462 0.00 0.00 0.00 2.74
2680 4351 5.014808 ACCTTACAAAGTCGTACAACAGT 57.985 39.130 0.00 0.00 0.00 3.55
2681 4352 5.287226 AGACCTTACAAAGTCGTACAACAG 58.713 41.667 0.00 0.00 0.00 3.16
2682 4353 5.266733 AGACCTTACAAAGTCGTACAACA 57.733 39.130 0.00 0.00 0.00 3.33
2683 4354 5.521372 ACAAGACCTTACAAAGTCGTACAAC 59.479 40.000 0.00 0.00 0.00 3.32
2684 4355 5.521010 CACAAGACCTTACAAAGTCGTACAA 59.479 40.000 0.00 0.00 0.00 2.41
2685 4356 5.045215 CACAAGACCTTACAAAGTCGTACA 58.955 41.667 0.00 0.00 0.00 2.90
2686 4357 5.045872 ACACAAGACCTTACAAAGTCGTAC 58.954 41.667 0.00 0.00 0.00 3.67
2687 4358 5.266733 ACACAAGACCTTACAAAGTCGTA 57.733 39.130 0.00 0.00 0.00 3.43
2688 4359 4.133013 ACACAAGACCTTACAAAGTCGT 57.867 40.909 0.00 0.00 0.00 4.34
2689 4360 6.592798 TTAACACAAGACCTTACAAAGTCG 57.407 37.500 0.00 0.00 0.00 4.18
2712 4383 9.801873 GATGCATACGGCCAATTTATTAATTAT 57.198 29.630 2.24 0.00 43.89 1.28
2713 4384 7.965655 CGATGCATACGGCCAATTTATTAATTA 59.034 33.333 2.24 0.00 43.89 1.40
2714 4385 6.806249 CGATGCATACGGCCAATTTATTAATT 59.194 34.615 2.24 0.00 43.89 1.40
2715 4386 6.072175 ACGATGCATACGGCCAATTTATTAAT 60.072 34.615 18.34 0.00 43.89 1.40
2716 4387 5.239744 ACGATGCATACGGCCAATTTATTAA 59.760 36.000 18.34 0.00 43.89 1.40
2717 4388 4.757657 ACGATGCATACGGCCAATTTATTA 59.242 37.500 18.34 0.00 43.89 0.98
2718 4389 3.568007 ACGATGCATACGGCCAATTTATT 59.432 39.130 18.34 0.00 43.89 1.40
2719 4390 3.146066 ACGATGCATACGGCCAATTTAT 58.854 40.909 18.34 0.00 43.89 1.40
2720 4391 2.546368 GACGATGCATACGGCCAATTTA 59.454 45.455 18.34 0.00 43.89 1.40
2721 4392 1.333619 GACGATGCATACGGCCAATTT 59.666 47.619 18.34 1.14 43.89 1.82
2722 4393 0.944386 GACGATGCATACGGCCAATT 59.056 50.000 18.34 0.00 43.89 2.32
2723 4394 2.616969 GACGATGCATACGGCCAAT 58.383 52.632 18.34 0.00 43.89 3.16
2724 4395 4.118480 GACGATGCATACGGCCAA 57.882 55.556 18.34 0.00 43.89 4.52
2727 4398 0.319900 ATCTGGACGATGCATACGGC 60.320 55.000 18.34 16.22 45.13 5.68
2728 4399 1.422388 CATCTGGACGATGCATACGG 58.578 55.000 18.34 6.85 42.75 4.02
2736 4407 1.445095 GCCTCTGCATCTGGACGAT 59.555 57.895 0.00 0.00 37.47 3.73
2737 4408 2.725312 GGCCTCTGCATCTGGACGA 61.725 63.158 0.00 0.00 40.13 4.20
2738 4409 2.202987 GGCCTCTGCATCTGGACG 60.203 66.667 0.00 0.00 40.13 4.79
2739 4410 2.202987 CGGCCTCTGCATCTGGAC 60.203 66.667 0.00 0.35 40.13 4.02
2740 4411 3.473647 CCGGCCTCTGCATCTGGA 61.474 66.667 0.00 0.00 40.13 3.86
2741 4412 4.559063 CCCGGCCTCTGCATCTGG 62.559 72.222 0.00 0.00 40.13 3.86
2742 4413 4.559063 CCCCGGCCTCTGCATCTG 62.559 72.222 0.00 0.00 40.13 2.90
2748 4419 3.787001 GAAGACCCCCGGCCTCTG 61.787 72.222 0.00 0.00 0.00 3.35
2754 4425 1.498176 AAAAGGAGGAAGACCCCCGG 61.498 60.000 0.00 0.00 36.73 5.73
2755 4426 0.035343 GAAAAGGAGGAAGACCCCCG 60.035 60.000 0.00 0.00 36.73 5.73
2756 4427 0.035343 CGAAAAGGAGGAAGACCCCC 60.035 60.000 0.00 0.00 36.73 5.40
2757 4428 0.981943 TCGAAAAGGAGGAAGACCCC 59.018 55.000 0.00 0.00 36.73 4.95
2758 4429 2.853235 TTCGAAAAGGAGGAAGACCC 57.147 50.000 0.00 0.00 36.73 4.46
2778 4449 4.285775 CCCACTCCCATTTACCACATTTTT 59.714 41.667 0.00 0.00 0.00 1.94
2779 4450 3.837731 CCCACTCCCATTTACCACATTTT 59.162 43.478 0.00 0.00 0.00 1.82
2780 4451 3.181412 ACCCACTCCCATTTACCACATTT 60.181 43.478 0.00 0.00 0.00 2.32
2781 4452 2.381961 ACCCACTCCCATTTACCACATT 59.618 45.455 0.00 0.00 0.00 2.71
2782 4453 2.000048 ACCCACTCCCATTTACCACAT 59.000 47.619 0.00 0.00 0.00 3.21
2783 4454 1.074727 CACCCACTCCCATTTACCACA 59.925 52.381 0.00 0.00 0.00 4.17
2784 4455 1.834188 CACCCACTCCCATTTACCAC 58.166 55.000 0.00 0.00 0.00 4.16
2785 4456 0.039035 GCACCCACTCCCATTTACCA 59.961 55.000 0.00 0.00 0.00 3.25
2786 4457 0.331616 AGCACCCACTCCCATTTACC 59.668 55.000 0.00 0.00 0.00 2.85
2902 4573 4.336713 GGTGCTTCCTTAACATCTTCATCC 59.663 45.833 0.00 0.00 0.00 3.51
2933 4604 6.280643 TGTCGAAGTCCCATTCATAGTTATG 58.719 40.000 0.00 0.00 35.04 1.90
3014 4685 4.410099 TGAAATCCAAGGAAGTGAAGCAT 58.590 39.130 0.00 0.00 0.00 3.79
3053 4724 4.346418 CCTAGCTTGTGTCCATAGGAAGAT 59.654 45.833 0.00 0.00 35.97 2.40
3062 4733 2.301870 CAACTACCCTAGCTTGTGTCCA 59.698 50.000 0.00 0.00 0.00 4.02
3133 4804 3.139077 GGAAACACTTCCTACACACTGG 58.861 50.000 0.00 0.00 46.80 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.