Multiple sequence alignment - TraesCS4D01G021100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G021100 chr4D 100.000 3687 0 0 1 3687 9068403 9072089 0.000000e+00 6809.0
1 TraesCS4D01G021100 chr4D 76.119 268 37 16 3433 3678 323602253 323601991 9.130000e-22 115.0
2 TraesCS4D01G021100 chr4D 84.762 105 16 0 3580 3684 151963239 151963135 5.500000e-19 106.0
3 TraesCS4D01G021100 chr4D 100.000 52 0 0 3970 4021 9072372 9072423 3.310000e-16 97.1
4 TraesCS4D01G021100 chr4A 86.447 2730 193 82 714 3362 594352173 594349540 0.000000e+00 2828.0
5 TraesCS4D01G021100 chr4A 90.035 572 44 6 2690 3248 594345209 594344638 0.000000e+00 728.0
6 TraesCS4D01G021100 chr4A 80.478 251 34 7 3418 3654 437829934 437830183 1.150000e-40 178.0
7 TraesCS4D01G021100 chr4A 81.633 98 15 2 420 515 713851123 713851027 1.200000e-10 78.7
8 TraesCS4D01G021100 chr4B 86.642 2695 174 94 674 3257 17016761 17019380 0.000000e+00 2811.0
9 TraesCS4D01G021100 chr7B 96.347 219 5 3 106 321 648055887 648055669 1.370000e-94 357.0
10 TraesCS4D01G021100 chr7B 96.714 213 5 2 106 316 301590890 301591102 1.780000e-93 353.0
11 TraesCS4D01G021100 chr7B 96.714 213 5 2 106 316 706059563 706059351 1.780000e-93 353.0
12 TraesCS4D01G021100 chr5D 96.729 214 5 2 106 317 439659555 439659342 4.940000e-94 355.0
13 TraesCS4D01G021100 chr5D 96.729 214 4 3 106 316 164651730 164651517 1.780000e-93 353.0
14 TraesCS4D01G021100 chr5D 81.759 307 38 11 3386 3678 14600912 14601214 1.440000e-59 241.0
15 TraesCS4D01G021100 chr5D 82.331 266 30 9 3427 3678 486817641 486817379 8.750000e-52 215.0
16 TraesCS4D01G021100 chr5D 80.634 284 41 7 3414 3684 558714930 558714648 1.460000e-49 207.0
17 TraesCS4D01G021100 chr5D 81.437 167 22 8 987 1147 391730397 391730560 1.170000e-25 128.0
18 TraesCS4D01G021100 chr5D 80.172 116 18 5 420 532 411186941 411187054 9.260000e-12 82.4
19 TraesCS4D01G021100 chr7D 96.714 213 5 2 106 316 227049050 227048838 1.780000e-93 353.0
20 TraesCS4D01G021100 chr7D 83.214 280 28 8 3408 3671 337562920 337562644 5.190000e-59 239.0
21 TraesCS4D01G021100 chr6A 96.714 213 5 2 106 316 276454111 276453899 1.780000e-93 353.0
22 TraesCS4D01G021100 chr2B 96.244 213 6 2 106 316 103200390 103200602 8.270000e-92 348.0
23 TraesCS4D01G021100 chr2B 94.643 224 10 2 106 327 486984795 486984572 2.970000e-91 346.0
24 TraesCS4D01G021100 chr1D 82.857 280 34 7 3411 3678 22952826 22952549 5.190000e-59 239.0
25 TraesCS4D01G021100 chr7A 82.721 272 30 9 3430 3687 566986341 566986073 4.040000e-55 226.0
26 TraesCS4D01G021100 chr5A 80.456 307 42 8 3386 3678 11230724 11231026 6.770000e-53 219.0
27 TraesCS4D01G021100 chr5A 84.800 125 19 0 1023 1147 494863170 494863294 4.220000e-25 126.0
28 TraesCS4D01G021100 chr3B 79.299 314 38 17 3382 3678 671846158 671846461 1.140000e-45 195.0
29 TraesCS4D01G021100 chr1B 79.310 290 36 14 3393 3666 457326829 457327110 8.880000e-42 182.0
30 TraesCS4D01G021100 chr1B 86.207 58 7 1 458 515 684050737 684050681 1.210000e-05 62.1
31 TraesCS4D01G021100 chr6D 77.695 269 31 17 3427 3678 428981827 428982083 1.950000e-28 137.0
32 TraesCS4D01G021100 chr5B 84.800 125 19 0 1023 1147 471852462 471852586 4.220000e-25 126.0
33 TraesCS4D01G021100 chr5B 93.617 47 2 1 458 504 493661606 493661651 7.210000e-08 69.4
34 TraesCS4D01G021100 chr2D 83.673 98 12 4 404 499 485666808 485666713 5.540000e-14 89.8
35 TraesCS4D01G021100 chr2A 89.796 49 4 1 457 505 197921318 197921271 1.210000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G021100 chr4D 9068403 9072423 4020 False 3453.05 6809 100.000 1 4021 2 chr4D.!!$F1 4020
1 TraesCS4D01G021100 chr4A 594349540 594352173 2633 True 2828.00 2828 86.447 714 3362 1 chr4A.!!$R2 2648
2 TraesCS4D01G021100 chr4A 594344638 594345209 571 True 728.00 728 90.035 2690 3248 1 chr4A.!!$R1 558
3 TraesCS4D01G021100 chr4B 17016761 17019380 2619 False 2811.00 2811 86.642 674 3257 1 chr4B.!!$F1 2583

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
711 712 0.041535 ATGCTGGCTTTCCCATTGGA 59.958 50.0 3.62 0.0 44.33 3.53 F
1454 1530 0.465705 GCAGACCCATCCAGAATCGA 59.534 55.0 0.00 0.0 0.00 3.59 F
1992 2122 0.108377 TGTGTGTTCTCTGTGTGCGT 60.108 50.0 0.00 0.0 0.00 5.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1973 2103 0.108377 ACGCACACAGAGAACACACA 60.108 50.0 0.0 0.0 0.00 3.72 R
2599 2735 0.108992 CCGTGTACCGTGTGCATAGT 60.109 55.0 0.0 0.0 30.01 2.12 R
3557 3722 0.105964 CGATTGCGGGGGATGTTAGA 59.894 55.0 0.0 0.0 0.00 2.10 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
109 110 9.277565 CATGATTAATAGTTGTTCAAAACTCCG 57.722 33.333 0.00 0.00 40.77 4.63
110 111 8.385898 TGATTAATAGTTGTTCAAAACTCCGT 57.614 30.769 0.00 0.00 40.77 4.69
111 112 8.842280 TGATTAATAGTTGTTCAAAACTCCGTT 58.158 29.630 0.00 0.00 40.77 4.44
112 113 9.673454 GATTAATAGTTGTTCAAAACTCCGTTT 57.327 29.630 0.00 0.00 40.77 3.60
113 114 9.673454 ATTAATAGTTGTTCAAAACTCCGTTTC 57.327 29.630 0.00 0.00 40.77 2.78
114 115 6.687081 ATAGTTGTTCAAAACTCCGTTTCA 57.313 33.333 0.00 0.00 40.77 2.69
115 116 4.981794 AGTTGTTCAAAACTCCGTTTCAG 58.018 39.130 0.00 0.00 35.44 3.02
116 117 4.457949 AGTTGTTCAAAACTCCGTTTCAGT 59.542 37.500 0.00 0.00 35.44 3.41
117 118 5.048294 AGTTGTTCAAAACTCCGTTTCAGTT 60.048 36.000 0.00 0.00 35.44 3.16
118 119 5.379732 TGTTCAAAACTCCGTTTCAGTTT 57.620 34.783 0.00 0.00 44.34 2.66
119 120 6.497785 TGTTCAAAACTCCGTTTCAGTTTA 57.502 33.333 0.00 0.00 42.14 2.01
120 121 6.316319 TGTTCAAAACTCCGTTTCAGTTTAC 58.684 36.000 0.00 0.00 42.14 2.01
121 122 6.072618 TGTTCAAAACTCCGTTTCAGTTTACA 60.073 34.615 0.00 0.00 42.14 2.41
122 123 6.497785 TCAAAACTCCGTTTCAGTTTACAA 57.502 33.333 0.00 0.00 42.14 2.41
123 124 6.548171 TCAAAACTCCGTTTCAGTTTACAAG 58.452 36.000 0.00 0.00 42.14 3.16
124 125 6.149807 TCAAAACTCCGTTTCAGTTTACAAGT 59.850 34.615 0.00 0.00 42.14 3.16
125 126 5.729974 AACTCCGTTTCAGTTTACAAGTC 57.270 39.130 0.00 0.00 29.29 3.01
126 127 4.124970 ACTCCGTTTCAGTTTACAAGTCC 58.875 43.478 0.00 0.00 0.00 3.85
127 128 4.141779 ACTCCGTTTCAGTTTACAAGTCCT 60.142 41.667 0.00 0.00 0.00 3.85
128 129 4.124238 TCCGTTTCAGTTTACAAGTCCTG 58.876 43.478 0.00 0.00 0.00 3.86
129 130 3.303791 CCGTTTCAGTTTACAAGTCCTGC 60.304 47.826 0.00 0.00 0.00 4.85
130 131 3.603857 CGTTTCAGTTTACAAGTCCTGCG 60.604 47.826 0.00 0.00 0.00 5.18
131 132 1.508632 TCAGTTTACAAGTCCTGCGC 58.491 50.000 0.00 0.00 0.00 6.09
132 133 0.163788 CAGTTTACAAGTCCTGCGCG 59.836 55.000 0.00 0.00 0.00 6.86
133 134 0.249741 AGTTTACAAGTCCTGCGCGT 60.250 50.000 8.43 0.00 0.00 6.01
134 135 1.000060 AGTTTACAAGTCCTGCGCGTA 60.000 47.619 8.43 0.71 0.00 4.42
135 136 1.997606 GTTTACAAGTCCTGCGCGTAT 59.002 47.619 8.43 0.00 0.00 3.06
136 137 3.119388 AGTTTACAAGTCCTGCGCGTATA 60.119 43.478 8.43 0.00 0.00 1.47
137 138 2.480224 TACAAGTCCTGCGCGTATAC 57.520 50.000 8.43 4.74 0.00 1.47
138 139 0.179119 ACAAGTCCTGCGCGTATACC 60.179 55.000 8.43 0.00 0.00 2.73
139 140 0.102481 CAAGTCCTGCGCGTATACCT 59.898 55.000 8.43 0.00 0.00 3.08
140 141 1.335810 CAAGTCCTGCGCGTATACCTA 59.664 52.381 8.43 0.00 0.00 3.08
141 142 1.236628 AGTCCTGCGCGTATACCTAG 58.763 55.000 8.43 0.00 0.00 3.02
142 143 0.240411 GTCCTGCGCGTATACCTAGG 59.760 60.000 7.41 7.41 0.00 3.02
143 144 0.179009 TCCTGCGCGTATACCTAGGT 60.179 55.000 20.57 20.57 0.00 3.08
144 145 0.672342 CCTGCGCGTATACCTAGGTT 59.328 55.000 22.11 10.62 0.00 3.50
145 146 1.602165 CCTGCGCGTATACCTAGGTTG 60.602 57.143 22.11 9.15 0.00 3.77
146 147 0.249155 TGCGCGTATACCTAGGTTGC 60.249 55.000 22.11 17.41 0.00 4.17
147 148 0.249155 GCGCGTATACCTAGGTTGCA 60.249 55.000 22.11 1.66 0.00 4.08
148 149 1.803625 GCGCGTATACCTAGGTTGCAA 60.804 52.381 22.11 1.21 0.00 4.08
149 150 2.750948 CGCGTATACCTAGGTTGCAAT 58.249 47.619 22.11 10.05 0.00 3.56
150 151 3.128349 CGCGTATACCTAGGTTGCAATT 58.872 45.455 22.11 0.00 0.00 2.32
151 152 3.558418 CGCGTATACCTAGGTTGCAATTT 59.442 43.478 22.11 0.00 0.00 1.82
152 153 4.746115 CGCGTATACCTAGGTTGCAATTTA 59.254 41.667 22.11 0.00 0.00 1.40
153 154 5.407387 CGCGTATACCTAGGTTGCAATTTAT 59.593 40.000 22.11 7.27 0.00 1.40
154 155 6.400727 CGCGTATACCTAGGTTGCAATTTATC 60.401 42.308 22.11 0.00 0.00 1.75
155 156 6.425721 GCGTATACCTAGGTTGCAATTTATCA 59.574 38.462 22.11 0.00 0.00 2.15
156 157 7.119262 GCGTATACCTAGGTTGCAATTTATCAT 59.881 37.037 22.11 5.16 0.00 2.45
157 158 8.656849 CGTATACCTAGGTTGCAATTTATCATC 58.343 37.037 22.11 0.00 0.00 2.92
158 159 8.947115 GTATACCTAGGTTGCAATTTATCATCC 58.053 37.037 22.11 0.00 0.00 3.51
159 160 6.018433 ACCTAGGTTGCAATTTATCATCCT 57.982 37.500 9.21 4.18 36.61 3.24
160 161 7.149202 ACCTAGGTTGCAATTTATCATCCTA 57.851 36.000 9.21 5.23 34.98 2.94
161 162 7.582719 ACCTAGGTTGCAATTTATCATCCTAA 58.417 34.615 9.21 0.00 35.44 2.69
162 163 8.227507 ACCTAGGTTGCAATTTATCATCCTAAT 58.772 33.333 9.21 0.00 35.44 1.73
163 164 9.739276 CCTAGGTTGCAATTTATCATCCTAATA 57.261 33.333 0.59 0.00 35.44 0.98
210 211 7.668525 ATACCTTTTGAAAGTAGAAACTCCG 57.331 36.000 3.09 0.00 33.75 4.63
211 212 5.677567 ACCTTTTGAAAGTAGAAACTCCGA 58.322 37.500 3.09 0.00 33.75 4.55
212 213 6.117488 ACCTTTTGAAAGTAGAAACTCCGAA 58.883 36.000 3.09 0.00 33.75 4.30
213 214 6.260271 ACCTTTTGAAAGTAGAAACTCCGAAG 59.740 38.462 3.09 0.00 33.75 3.79
214 215 6.260271 CCTTTTGAAAGTAGAAACTCCGAAGT 59.740 38.462 3.09 0.00 33.75 3.01
215 216 7.201705 CCTTTTGAAAGTAGAAACTCCGAAGTT 60.202 37.037 3.09 0.00 39.62 2.66
230 231 9.457436 AACTCCGAAGTTTATGTTGGTATATTT 57.543 29.630 0.00 0.00 43.28 1.40
231 232 9.457436 ACTCCGAAGTTTATGTTGGTATATTTT 57.543 29.630 0.00 0.00 28.74 1.82
265 266 9.920946 ATATGACTTGTATTAGGTTGGTCAAAT 57.079 29.630 0.00 0.00 36.16 2.32
266 267 8.650143 ATGACTTGTATTAGGTTGGTCAAATT 57.350 30.769 0.00 0.00 36.16 1.82
267 268 7.881142 TGACTTGTATTAGGTTGGTCAAATTG 58.119 34.615 0.00 0.00 30.81 2.32
268 269 7.721842 TGACTTGTATTAGGTTGGTCAAATTGA 59.278 33.333 0.00 0.00 30.81 2.57
269 270 7.882179 ACTTGTATTAGGTTGGTCAAATTGAC 58.118 34.615 17.16 17.16 46.23 3.18
280 281 4.138487 GTCAAATTGACGATCTAGGGGT 57.862 45.455 10.58 0.00 37.67 4.95
281 282 5.272283 GTCAAATTGACGATCTAGGGGTA 57.728 43.478 10.58 0.00 37.67 3.69
282 283 5.048507 GTCAAATTGACGATCTAGGGGTAC 58.951 45.833 10.58 0.00 37.67 3.34
283 284 4.049186 CAAATTGACGATCTAGGGGTACG 58.951 47.826 0.00 0.00 0.00 3.67
284 285 1.027357 TTGACGATCTAGGGGTACGC 58.973 55.000 0.29 0.29 43.76 4.42
296 297 4.781959 GTACGCGCACGCCCTGTA 62.782 66.667 5.73 3.39 45.53 2.74
297 298 4.053526 TACGCGCACGCCCTGTAA 62.054 61.111 5.73 0.00 45.53 2.41
298 299 3.570621 TACGCGCACGCCCTGTAAA 62.571 57.895 5.73 0.00 45.53 2.01
299 300 4.439472 CGCGCACGCCCTGTAAAC 62.439 66.667 8.75 0.00 37.98 2.01
300 301 3.047877 GCGCACGCCCTGTAAACT 61.048 61.111 0.30 0.00 34.56 2.66
301 302 2.860293 CGCACGCCCTGTAAACTG 59.140 61.111 0.00 0.00 0.00 3.16
302 303 1.666553 CGCACGCCCTGTAAACTGA 60.667 57.895 0.00 0.00 0.00 3.41
303 304 1.626654 CGCACGCCCTGTAAACTGAG 61.627 60.000 0.00 0.00 0.00 3.35
304 305 1.912371 GCACGCCCTGTAAACTGAGC 61.912 60.000 0.00 0.00 0.00 4.26
305 306 3.474806 CGCCCTGTAAACTGAGCG 58.525 61.111 1.92 1.92 37.39 5.03
306 307 1.080093 CGCCCTGTAAACTGAGCGA 60.080 57.895 9.67 0.00 46.03 4.93
307 308 1.078759 CGCCCTGTAAACTGAGCGAG 61.079 60.000 9.67 0.00 46.03 5.03
308 309 0.246635 GCCCTGTAAACTGAGCGAGA 59.753 55.000 0.00 0.00 0.00 4.04
309 310 1.737363 GCCCTGTAAACTGAGCGAGAG 60.737 57.143 0.00 0.00 0.00 3.20
310 311 1.134965 CCCTGTAAACTGAGCGAGAGG 60.135 57.143 0.00 0.00 0.00 3.69
312 313 2.753452 CCTGTAAACTGAGCGAGAGGTA 59.247 50.000 0.00 0.00 45.11 3.08
313 314 3.181495 CCTGTAAACTGAGCGAGAGGTAG 60.181 52.174 0.00 0.00 45.11 3.18
314 315 3.418995 TGTAAACTGAGCGAGAGGTAGT 58.581 45.455 0.00 0.00 45.11 2.73
315 316 4.582869 TGTAAACTGAGCGAGAGGTAGTA 58.417 43.478 0.00 0.00 45.11 1.82
316 317 4.394300 TGTAAACTGAGCGAGAGGTAGTAC 59.606 45.833 0.00 0.00 45.11 2.73
317 318 2.041251 ACTGAGCGAGAGGTAGTACC 57.959 55.000 11.73 11.73 45.11 3.34
333 334 6.346896 GGTAGTACCTCTTATGTGAAAAGGG 58.653 44.000 12.41 0.00 34.73 3.95
335 336 5.098663 AGTACCTCTTATGTGAAAAGGGGA 58.901 41.667 8.70 0.00 46.01 4.81
336 337 5.550403 AGTACCTCTTATGTGAAAAGGGGAA 59.450 40.000 8.70 0.00 46.01 3.97
337 338 4.923415 ACCTCTTATGTGAAAAGGGGAAG 58.077 43.478 8.70 0.00 46.01 3.46
338 339 4.354087 ACCTCTTATGTGAAAAGGGGAAGT 59.646 41.667 8.70 0.00 46.01 3.01
339 340 5.550403 ACCTCTTATGTGAAAAGGGGAAGTA 59.450 40.000 8.70 0.00 46.01 2.24
340 341 6.045106 ACCTCTTATGTGAAAAGGGGAAGTAA 59.955 38.462 8.70 0.00 46.01 2.24
341 342 6.599638 CCTCTTATGTGAAAAGGGGAAGTAAG 59.400 42.308 0.00 0.00 46.01 2.34
342 343 7.086685 TCTTATGTGAAAAGGGGAAGTAAGT 57.913 36.000 0.00 0.00 0.00 2.24
343 344 6.940298 TCTTATGTGAAAAGGGGAAGTAAGTG 59.060 38.462 0.00 0.00 0.00 3.16
344 345 3.827722 TGTGAAAAGGGGAAGTAAGTGG 58.172 45.455 0.00 0.00 0.00 4.00
345 346 3.154710 GTGAAAAGGGGAAGTAAGTGGG 58.845 50.000 0.00 0.00 0.00 4.61
346 347 3.057586 TGAAAAGGGGAAGTAAGTGGGA 58.942 45.455 0.00 0.00 0.00 4.37
347 348 3.073946 TGAAAAGGGGAAGTAAGTGGGAG 59.926 47.826 0.00 0.00 0.00 4.30
348 349 0.992695 AAGGGGAAGTAAGTGGGAGC 59.007 55.000 0.00 0.00 0.00 4.70
349 350 0.178873 AGGGGAAGTAAGTGGGAGCA 60.179 55.000 0.00 0.00 0.00 4.26
350 351 0.919710 GGGGAAGTAAGTGGGAGCAT 59.080 55.000 0.00 0.00 0.00 3.79
351 352 1.408822 GGGGAAGTAAGTGGGAGCATG 60.409 57.143 0.00 0.00 0.00 4.06
352 353 1.282157 GGGAAGTAAGTGGGAGCATGT 59.718 52.381 0.00 0.00 0.00 3.21
353 354 2.504175 GGGAAGTAAGTGGGAGCATGTA 59.496 50.000 0.00 0.00 0.00 2.29
354 355 3.054655 GGGAAGTAAGTGGGAGCATGTAA 60.055 47.826 0.00 0.00 0.00 2.41
355 356 4.566907 GGGAAGTAAGTGGGAGCATGTAAA 60.567 45.833 0.00 0.00 0.00 2.01
356 357 4.636206 GGAAGTAAGTGGGAGCATGTAAAG 59.364 45.833 0.00 0.00 0.00 1.85
357 358 5.488341 GAAGTAAGTGGGAGCATGTAAAGA 58.512 41.667 0.00 0.00 0.00 2.52
358 359 5.499004 AGTAAGTGGGAGCATGTAAAGAA 57.501 39.130 0.00 0.00 0.00 2.52
359 360 5.876357 AGTAAGTGGGAGCATGTAAAGAAA 58.124 37.500 0.00 0.00 0.00 2.52
360 361 5.705905 AGTAAGTGGGAGCATGTAAAGAAAC 59.294 40.000 0.00 0.00 0.00 2.78
361 362 3.421844 AGTGGGAGCATGTAAAGAAACC 58.578 45.455 0.00 0.00 0.00 3.27
362 363 3.074538 AGTGGGAGCATGTAAAGAAACCT 59.925 43.478 0.00 0.00 0.00 3.50
363 364 3.440522 GTGGGAGCATGTAAAGAAACCTC 59.559 47.826 0.00 0.00 0.00 3.85
364 365 3.330701 TGGGAGCATGTAAAGAAACCTCT 59.669 43.478 0.00 0.00 0.00 3.69
365 366 4.202567 TGGGAGCATGTAAAGAAACCTCTT 60.203 41.667 0.00 0.00 44.11 2.85
366 367 5.013704 TGGGAGCATGTAAAGAAACCTCTTA 59.986 40.000 0.00 0.00 41.23 2.10
367 368 6.122964 GGGAGCATGTAAAGAAACCTCTTAT 58.877 40.000 0.00 0.00 41.23 1.73
368 369 6.603599 GGGAGCATGTAAAGAAACCTCTTATT 59.396 38.462 0.00 0.00 41.23 1.40
369 370 7.122799 GGGAGCATGTAAAGAAACCTCTTATTT 59.877 37.037 0.00 0.00 41.23 1.40
370 371 9.174166 GGAGCATGTAAAGAAACCTCTTATTTA 57.826 33.333 0.00 0.00 41.23 1.40
618 619 8.716674 ATGTATGCATGAGAAATATTTTCCCT 57.283 30.769 10.16 0.00 33.37 4.20
619 620 9.812347 ATGTATGCATGAGAAATATTTTCCCTA 57.188 29.630 10.16 0.00 33.37 3.53
620 621 9.812347 TGTATGCATGAGAAATATTTTCCCTAT 57.188 29.630 10.16 0.00 0.00 2.57
623 624 9.812347 ATGCATGAGAAATATTTTCCCTATACA 57.188 29.630 0.00 0.00 0.00 2.29
624 625 9.066892 TGCATGAGAAATATTTTCCCTATACAC 57.933 33.333 1.43 0.00 0.00 2.90
625 626 9.066892 GCATGAGAAATATTTTCCCTATACACA 57.933 33.333 1.43 0.00 0.00 3.72
667 668 5.365403 TTTTTATGTAAAGTGTCCTGGCG 57.635 39.130 0.00 0.00 0.00 5.69
668 669 2.018542 TATGTAAAGTGTCCTGGCGC 57.981 50.000 0.00 0.00 0.00 6.53
669 670 0.324943 ATGTAAAGTGTCCTGGCGCT 59.675 50.000 7.64 0.00 0.00 5.92
670 671 0.602638 TGTAAAGTGTCCTGGCGCTG 60.603 55.000 7.64 0.00 0.00 5.18
671 672 0.602905 GTAAAGTGTCCTGGCGCTGT 60.603 55.000 7.64 3.10 0.00 4.40
672 673 0.320421 TAAAGTGTCCTGGCGCTGTC 60.320 55.000 7.64 0.00 0.00 3.51
689 690 0.507358 GTCACGCTGGTTCGAGTTTC 59.493 55.000 0.00 0.00 0.00 2.78
691 692 0.600255 CACGCTGGTTCGAGTTTCCT 60.600 55.000 0.00 0.00 0.00 3.36
692 693 0.963962 ACGCTGGTTCGAGTTTCCTA 59.036 50.000 0.00 0.00 0.00 2.94
696 697 2.678190 GCTGGTTCGAGTTTCCTATGCT 60.678 50.000 0.00 0.00 0.00 3.79
711 712 0.041535 ATGCTGGCTTTCCCATTGGA 59.958 50.000 3.62 0.00 44.33 3.53
712 713 0.899717 TGCTGGCTTTCCCATTGGAC 60.900 55.000 3.62 0.00 44.33 4.02
813 833 3.489785 GCGTCGGATCTTTATTACAGGTG 59.510 47.826 0.00 0.00 0.00 4.00
975 1019 2.997315 CCCGCTCACCTCACCTCA 60.997 66.667 0.00 0.00 0.00 3.86
1256 1316 1.337817 CCGTTTCTGAGACTCGTGCG 61.338 60.000 0.00 0.00 0.00 5.34
1294 1361 2.423818 GCTCGTCGTTCGTCGTTCC 61.424 63.158 10.78 0.00 40.80 3.62
1295 1362 2.127646 TCGTCGTTCGTCGTTCCG 60.128 61.111 10.78 0.00 40.80 4.30
1390 1466 1.127951 GCACCGTGTAATGAACTTCGG 59.872 52.381 0.00 0.00 45.09 4.30
1451 1527 1.274703 ACCGCAGACCCATCCAGAAT 61.275 55.000 0.00 0.00 0.00 2.40
1454 1530 0.465705 GCAGACCCATCCAGAATCGA 59.534 55.000 0.00 0.00 0.00 3.59
1471 1547 1.542030 TCGAGAGGTGAGAGAAGCAAC 59.458 52.381 0.00 0.00 0.00 4.17
1477 1558 2.435805 AGGTGAGAGAAGCAACAACTCA 59.564 45.455 0.00 0.00 35.65 3.41
1485 1566 6.002704 AGAGAAGCAACAACTCATCTTCAAT 58.997 36.000 0.00 0.00 36.52 2.57
1515 1602 6.933514 TTTTTCCAAAATGAAGGAGGCTAT 57.066 33.333 0.00 0.00 34.91 2.97
1520 1607 4.214971 CCAAAATGAAGGAGGCTATGATCG 59.785 45.833 0.00 0.00 0.00 3.69
1522 1609 3.951775 ATGAAGGAGGCTATGATCGAC 57.048 47.619 0.00 0.00 0.00 4.20
1529 1616 1.959985 AGGCTATGATCGACCACTCAG 59.040 52.381 0.00 0.00 0.00 3.35
1530 1617 1.604185 GGCTATGATCGACCACTCAGC 60.604 57.143 1.96 1.96 0.00 4.26
1552 1639 0.669318 TCGCTCGTGTGACAAATCCC 60.669 55.000 0.00 0.00 0.00 3.85
1569 1656 2.195727 TCCCATGCAGTACCTCATCAA 58.804 47.619 0.00 0.00 0.00 2.57
1633 1723 5.295292 ACAGCTAGCAAAGTACTATGCATTG 59.705 40.000 18.83 5.32 44.95 2.82
1645 1735 3.947834 ACTATGCATTGTACCTTTGCTCC 59.052 43.478 12.24 0.00 37.28 4.70
1647 1737 2.161855 TGCATTGTACCTTTGCTCCAG 58.838 47.619 11.53 0.00 37.28 3.86
1704 1818 9.739276 TCCTATTTCACATCTTGTTTATGTTCT 57.261 29.630 0.00 0.00 35.39 3.01
1749 1863 1.032114 GGGGGCATTGAACGAGAAGG 61.032 60.000 0.00 0.00 0.00 3.46
1761 1875 0.741915 CGAGAAGGTAGAGGTGAGCC 59.258 60.000 0.00 0.00 0.00 4.70
1762 1876 1.116308 GAGAAGGTAGAGGTGAGCCC 58.884 60.000 0.00 0.00 34.57 5.19
1764 1878 1.930914 AGAAGGTAGAGGTGAGCCCTA 59.069 52.381 0.00 0.00 46.51 3.53
1777 1901 3.006940 TGAGCCCTAGCATTTTGTAACG 58.993 45.455 0.00 0.00 43.56 3.18
1781 1905 4.634443 AGCCCTAGCATTTTGTAACGTTAG 59.366 41.667 8.60 0.00 43.56 2.34
1782 1906 4.632688 GCCCTAGCATTTTGTAACGTTAGA 59.367 41.667 8.60 4.31 39.53 2.10
1783 1907 5.296035 GCCCTAGCATTTTGTAACGTTAGAT 59.704 40.000 8.60 0.00 39.53 1.98
1821 1948 7.238710 ACAAGGAAACCATCTTATTAACCAGT 58.761 34.615 0.00 0.00 0.00 4.00
1825 1952 6.596497 GGAAACCATCTTATTAACCAGTCGAA 59.404 38.462 0.00 0.00 0.00 3.71
1828 1955 7.787725 ACCATCTTATTAACCAGTCGAATTC 57.212 36.000 0.00 0.00 0.00 2.17
1829 1956 7.565680 ACCATCTTATTAACCAGTCGAATTCT 58.434 34.615 3.52 0.00 0.00 2.40
1830 1957 8.047310 ACCATCTTATTAACCAGTCGAATTCTT 58.953 33.333 3.52 0.00 0.00 2.52
1831 1958 8.552034 CCATCTTATTAACCAGTCGAATTCTTC 58.448 37.037 3.52 0.00 0.00 2.87
1832 1959 8.552034 CATCTTATTAACCAGTCGAATTCTTCC 58.448 37.037 3.52 0.00 0.00 3.46
1833 1960 7.617225 TCTTATTAACCAGTCGAATTCTTCCA 58.383 34.615 3.52 0.00 0.00 3.53
1834 1961 8.098286 TCTTATTAACCAGTCGAATTCTTCCAA 58.902 33.333 3.52 0.00 0.00 3.53
1925 2055 1.571215 GGTACAAACCAAGACCCGCG 61.571 60.000 0.00 0.00 45.98 6.46
1926 2056 1.962306 TACAAACCAAGACCCGCGC 60.962 57.895 0.00 0.00 0.00 6.86
1927 2057 4.038080 CAAACCAAGACCCGCGCC 62.038 66.667 0.00 0.00 0.00 6.53
1973 2103 2.150424 CGCGACCTTGATCGTGTTT 58.850 52.632 0.00 0.00 45.33 2.83
1981 2111 3.064820 ACCTTGATCGTGTTTGTGTGTTC 59.935 43.478 0.00 0.00 0.00 3.18
1992 2122 0.108377 TGTGTGTTCTCTGTGTGCGT 60.108 50.000 0.00 0.00 0.00 5.24
2035 2165 2.740826 CGCGTTCGGTTCCATGGT 60.741 61.111 12.58 0.00 0.00 3.55
2036 2166 2.322081 CGCGTTCGGTTCCATGGTT 61.322 57.895 12.58 0.00 0.00 3.67
2104 2234 3.002144 GTCGTCGAGAGGAAGGTACATAC 59.998 52.174 0.00 0.00 0.00 2.39
2105 2235 2.941064 CGTCGAGAGGAAGGTACATACA 59.059 50.000 0.00 0.00 0.00 2.29
2106 2236 3.242673 CGTCGAGAGGAAGGTACATACAC 60.243 52.174 0.00 0.00 0.00 2.90
2107 2237 3.693085 GTCGAGAGGAAGGTACATACACA 59.307 47.826 0.00 0.00 0.00 3.72
2108 2238 4.338682 GTCGAGAGGAAGGTACATACACAT 59.661 45.833 0.00 0.00 0.00 3.21
2112 2242 6.206829 CGAGAGGAAGGTACATACACATATGA 59.793 42.308 10.38 0.00 40.75 2.15
2138 2268 4.064388 CCACAAATTTGCCTCGGAAAAAT 58.936 39.130 18.12 0.00 0.00 1.82
2140 2270 5.698545 CCACAAATTTGCCTCGGAAAAATAA 59.301 36.000 18.12 0.00 0.00 1.40
2141 2271 6.347321 CCACAAATTTGCCTCGGAAAAATAAC 60.347 38.462 18.12 0.00 0.00 1.89
2142 2272 5.404066 ACAAATTTGCCTCGGAAAAATAACG 59.596 36.000 18.12 0.00 0.00 3.18
2143 2273 3.562567 TTTGCCTCGGAAAAATAACGG 57.437 42.857 0.00 0.00 0.00 4.44
2260 2391 4.910585 CGCCCGGGATGCAGGTAC 62.911 72.222 29.31 0.79 0.00 3.34
2268 2399 1.590792 GATGCAGGTACGTACGGCC 60.591 63.158 27.51 20.03 0.00 6.13
2290 2421 6.195165 GCCATCTTCGAGATCACATTTAAAC 58.805 40.000 0.00 0.00 31.32 2.01
2301 2432 4.751060 TCACATTTAAACGCGTAGGATCT 58.249 39.130 14.46 0.00 0.00 2.75
2310 2441 1.360551 CGTAGGATCTCCACGCTGG 59.639 63.158 0.00 0.00 39.43 4.85
2311 2442 1.101635 CGTAGGATCTCCACGCTGGA 61.102 60.000 6.57 6.57 45.98 3.86
2333 2464 1.248785 ATGCGCGGGATCCTACGTAT 61.249 55.000 22.22 20.70 0.00 3.06
2336 2470 1.133790 GCGCGGGATCCTACGTATTAT 59.866 52.381 22.22 0.00 0.00 1.28
2342 2476 4.561938 CGGGATCCTACGTATTATTGCCAA 60.562 45.833 12.58 0.00 0.00 4.52
2344 2478 4.694037 GGATCCTACGTATTATTGCCAACC 59.306 45.833 3.84 0.00 0.00 3.77
2347 2481 5.302360 TCCTACGTATTATTGCCAACCATC 58.698 41.667 0.00 0.00 0.00 3.51
2348 2482 5.060506 CCTACGTATTATTGCCAACCATCA 58.939 41.667 0.00 0.00 0.00 3.07
2350 2484 6.206634 CCTACGTATTATTGCCAACCATCAAT 59.793 38.462 0.00 0.00 36.87 2.57
2351 2485 5.830912 ACGTATTATTGCCAACCATCAATG 58.169 37.500 0.00 0.00 34.95 2.82
2352 2486 5.359576 ACGTATTATTGCCAACCATCAATGT 59.640 36.000 0.00 0.00 34.95 2.71
2353 2487 5.686841 CGTATTATTGCCAACCATCAATGTG 59.313 40.000 0.00 0.00 34.95 3.21
2354 2488 5.680594 ATTATTGCCAACCATCAATGTGT 57.319 34.783 0.00 0.00 34.95 3.72
2365 2499 2.334971 TCAATGTGTTTGATGCGCAG 57.665 45.000 18.32 0.00 39.44 5.18
2373 2507 3.605486 GTGTTTGATGCGCAGAAGATTTC 59.395 43.478 18.32 7.15 0.00 2.17
2375 2509 4.022935 TGTTTGATGCGCAGAAGATTTCTT 60.023 37.500 18.32 0.00 38.11 2.52
2400 2536 7.829725 TCATTTTACCCATGAAGATTGTCTTG 58.170 34.615 0.00 0.00 36.73 3.02
2402 2538 2.450476 ACCCATGAAGATTGTCTTGGC 58.550 47.619 0.00 0.00 40.09 4.52
2403 2539 1.402968 CCCATGAAGATTGTCTTGGCG 59.597 52.381 0.00 0.00 40.09 5.69
2404 2540 2.358957 CCATGAAGATTGTCTTGGCGA 58.641 47.619 0.00 0.00 36.73 5.54
2405 2541 2.947652 CCATGAAGATTGTCTTGGCGAT 59.052 45.455 0.00 0.00 36.73 4.58
2406 2542 3.242969 CCATGAAGATTGTCTTGGCGATG 60.243 47.826 0.00 0.00 36.73 3.84
2409 2545 0.254178 AGATTGTCTTGGCGATGGCT 59.746 50.000 0.00 0.00 39.81 4.75
2587 2723 3.567478 TACCTCAGGCACGTGCACG 62.567 63.158 38.60 35.99 44.36 5.34
2588 2724 4.662961 CCTCAGGCACGTGCACGA 62.663 66.667 42.94 30.70 44.36 4.35
2598 2734 1.130373 CACGTGCACGAATAATTGCCT 59.870 47.619 42.94 16.00 43.02 4.75
2599 2735 2.350192 CACGTGCACGAATAATTGCCTA 59.650 45.455 42.94 0.00 43.02 3.93
2600 2736 2.350498 ACGTGCACGAATAATTGCCTAC 59.650 45.455 42.94 0.00 43.02 3.18
2602 2738 3.799963 CGTGCACGAATAATTGCCTACTA 59.200 43.478 34.93 0.00 43.02 1.82
2604 2740 5.612492 CGTGCACGAATAATTGCCTACTATG 60.612 44.000 34.93 0.00 43.02 2.23
2606 2742 4.213270 GCACGAATAATTGCCTACTATGCA 59.787 41.667 0.00 0.00 36.84 3.96
2607 2743 5.679906 CACGAATAATTGCCTACTATGCAC 58.320 41.667 0.00 0.00 38.72 4.57
2608 2744 5.236263 CACGAATAATTGCCTACTATGCACA 59.764 40.000 0.00 0.00 38.72 4.57
2609 2745 5.236478 ACGAATAATTGCCTACTATGCACAC 59.764 40.000 0.00 0.00 38.72 3.82
2610 2746 5.612492 CGAATAATTGCCTACTATGCACACG 60.612 44.000 0.00 0.00 38.72 4.49
2612 2755 0.611200 TTGCCTACTATGCACACGGT 59.389 50.000 0.00 0.00 38.72 4.83
2626 2769 2.340809 CGGTACACGGCAACCTGA 59.659 61.111 0.00 0.00 39.42 3.86
2627 2770 1.736645 CGGTACACGGCAACCTGAG 60.737 63.158 0.00 0.00 39.42 3.35
2628 2771 1.370064 GGTACACGGCAACCTGAGT 59.630 57.895 0.00 0.00 32.72 3.41
2650 2793 6.561614 AGTACCTGACACGTCATTAGTAATG 58.438 40.000 15.56 15.56 39.13 1.90
2667 2810 8.624701 TTAGTAATGCTAATGTGTACGAGTTC 57.375 34.615 0.00 0.00 34.95 3.01
2673 2816 8.798748 ATGCTAATGTGTACGAGTTCTATTAC 57.201 34.615 0.00 0.00 0.00 1.89
2723 2866 4.028490 AAATCGCAGGTGGCCGGA 62.028 61.111 5.05 0.00 40.31 5.14
2942 3085 1.134401 GCCAGCTGCTCCTACAACATA 60.134 52.381 8.66 0.00 36.87 2.29
3029 3172 2.983136 CAACGTCGGCTGATCTCATATC 59.017 50.000 0.00 0.00 0.00 1.63
3030 3173 2.230660 ACGTCGGCTGATCTCATATCA 58.769 47.619 0.00 0.00 0.00 2.15
3031 3174 2.822561 ACGTCGGCTGATCTCATATCAT 59.177 45.455 0.00 0.00 0.00 2.45
3032 3175 4.010349 ACGTCGGCTGATCTCATATCATA 58.990 43.478 0.00 0.00 0.00 2.15
3055 3201 1.273606 CCCGCTGGTCCTATCTACATG 59.726 57.143 0.00 0.00 0.00 3.21
3060 3210 4.437524 CGCTGGTCCTATCTACATGTATCG 60.438 50.000 5.91 0.00 0.00 2.92
3064 3214 5.008331 GGTCCTATCTACATGTATCGTCCA 58.992 45.833 5.91 0.00 0.00 4.02
3191 3349 9.685828 ACTCTAGAGCGAAATCTTATTCATAAC 57.314 33.333 19.97 0.00 0.00 1.89
3250 3408 6.303970 CAGTCACTTAAATTCGCAGTGATTTG 59.696 38.462 14.21 12.35 46.56 2.32
3257 3418 6.393720 AAATTCGCAGTGATTTGCATTTAC 57.606 33.333 0.00 0.00 44.28 2.01
3262 3423 3.922240 GCAGTGATTTGCATTTACAGTGG 59.078 43.478 15.16 3.89 43.53 4.00
3264 3425 5.156355 CAGTGATTTGCATTTACAGTGGTC 58.844 41.667 0.00 0.00 0.00 4.02
3265 3426 4.218417 AGTGATTTGCATTTACAGTGGTCC 59.782 41.667 0.00 0.00 0.00 4.46
3268 3429 5.245751 TGATTTGCATTTACAGTGGTCCATT 59.754 36.000 0.00 0.00 0.00 3.16
3269 3430 5.543507 TTTGCATTTACAGTGGTCCATTT 57.456 34.783 0.00 0.00 0.00 2.32
3272 3433 7.946381 TTGCATTTACAGTGGTCCATTTATA 57.054 32.000 0.00 0.00 0.00 0.98
3278 3439 9.693739 ATTTACAGTGGTCCATTTATACATCAA 57.306 29.630 0.00 0.00 0.00 2.57
3280 3441 7.630242 ACAGTGGTCCATTTATACATCAAAG 57.370 36.000 0.00 0.00 0.00 2.77
3292 3453 1.963515 ACATCAAAGTTCCCAGCAACC 59.036 47.619 0.00 0.00 0.00 3.77
3296 3461 0.031616 AAAGTTCCCAGCAACCCCAA 60.032 50.000 0.00 0.00 0.00 4.12
3298 3463 1.152546 GTTCCCAGCAACCCCAACT 60.153 57.895 0.00 0.00 0.00 3.16
3302 3467 1.659794 CCAGCAACCCCAACTTTCG 59.340 57.895 0.00 0.00 0.00 3.46
3303 3468 1.007387 CAGCAACCCCAACTTTCGC 60.007 57.895 0.00 0.00 0.00 4.70
3310 3475 0.597377 CCCCAACTTTCGCTTTGCAC 60.597 55.000 0.00 0.00 0.00 4.57
3311 3476 0.934436 CCCAACTTTCGCTTTGCACG 60.934 55.000 0.00 0.00 0.00 5.34
3362 3527 3.803186 ATAGATGATGCTTGGAAGGGG 57.197 47.619 0.00 0.00 0.00 4.79
3363 3528 1.600058 AGATGATGCTTGGAAGGGGA 58.400 50.000 0.00 0.00 0.00 4.81
3364 3529 1.925255 AGATGATGCTTGGAAGGGGAA 59.075 47.619 0.00 0.00 0.00 3.97
3365 3530 2.312741 AGATGATGCTTGGAAGGGGAAA 59.687 45.455 0.00 0.00 0.00 3.13
3366 3531 1.923356 TGATGCTTGGAAGGGGAAAC 58.077 50.000 0.00 0.00 0.00 2.78
3367 3532 1.146774 TGATGCTTGGAAGGGGAAACA 59.853 47.619 0.00 0.00 0.00 2.83
3368 3533 2.247358 GATGCTTGGAAGGGGAAACAA 58.753 47.619 0.00 0.00 0.00 2.83
3369 3534 1.408969 TGCTTGGAAGGGGAAACAAC 58.591 50.000 0.00 0.00 0.00 3.32
3370 3535 1.342474 TGCTTGGAAGGGGAAACAACA 60.342 47.619 0.00 0.00 0.00 3.33
3371 3536 1.068588 GCTTGGAAGGGGAAACAACAC 59.931 52.381 0.00 0.00 0.00 3.32
3372 3537 2.666317 CTTGGAAGGGGAAACAACACT 58.334 47.619 0.00 0.00 0.00 3.55
3373 3538 3.827722 CTTGGAAGGGGAAACAACACTA 58.172 45.455 0.00 0.00 0.00 2.74
3374 3539 3.217681 TGGAAGGGGAAACAACACTAC 57.782 47.619 0.00 0.00 0.00 2.73
3375 3540 2.781174 TGGAAGGGGAAACAACACTACT 59.219 45.455 0.00 0.00 0.00 2.57
3376 3541 3.146847 GGAAGGGGAAACAACACTACTG 58.853 50.000 0.00 0.00 0.00 2.74
3377 3542 3.434596 GGAAGGGGAAACAACACTACTGT 60.435 47.826 0.00 0.00 0.00 3.55
3378 3543 3.945640 AGGGGAAACAACACTACTGTT 57.054 42.857 0.00 0.00 41.61 3.16
3379 3544 5.370679 GAAGGGGAAACAACACTACTGTTA 58.629 41.667 0.00 0.00 38.66 2.41
3380 3545 5.578157 AGGGGAAACAACACTACTGTTAT 57.422 39.130 0.00 0.00 38.66 1.89
3381 3546 5.948842 AGGGGAAACAACACTACTGTTATT 58.051 37.500 0.00 0.00 38.66 1.40
3382 3547 6.370453 AGGGGAAACAACACTACTGTTATTT 58.630 36.000 0.00 0.00 39.26 1.40
3383 3548 6.489022 AGGGGAAACAACACTACTGTTATTTC 59.511 38.462 9.31 9.31 46.48 2.17
3384 3549 6.489022 GGGGAAACAACACTACTGTTATTTCT 59.511 38.462 14.56 0.00 46.44 2.52
3385 3550 7.013942 GGGGAAACAACACTACTGTTATTTCTT 59.986 37.037 14.56 0.00 46.44 2.52
3386 3551 8.410912 GGGAAACAACACTACTGTTATTTCTTT 58.589 33.333 14.56 0.00 46.44 2.52
3387 3552 9.797556 GGAAACAACACTACTGTTATTTCTTTT 57.202 29.630 14.56 0.00 46.44 2.27
3407 3572 9.672673 TTCTTTTTGTAAGAGGAATAGAGGATG 57.327 33.333 0.00 0.00 0.00 3.51
3408 3573 9.046846 TCTTTTTGTAAGAGGAATAGAGGATGA 57.953 33.333 0.00 0.00 0.00 2.92
3409 3574 9.844257 CTTTTTGTAAGAGGAATAGAGGATGAT 57.156 33.333 0.00 0.00 0.00 2.45
3410 3575 9.618890 TTTTTGTAAGAGGAATAGAGGATGATG 57.381 33.333 0.00 0.00 0.00 3.07
3411 3576 8.553085 TTTGTAAGAGGAATAGAGGATGATGA 57.447 34.615 0.00 0.00 0.00 2.92
3412 3577 8.733092 TTGTAAGAGGAATAGAGGATGATGAT 57.267 34.615 0.00 0.00 0.00 2.45
3413 3578 8.733092 TGTAAGAGGAATAGAGGATGATGATT 57.267 34.615 0.00 0.00 0.00 2.57
3414 3579 8.591940 TGTAAGAGGAATAGAGGATGATGATTG 58.408 37.037 0.00 0.00 0.00 2.67
3415 3580 6.623979 AGAGGAATAGAGGATGATGATTGG 57.376 41.667 0.00 0.00 0.00 3.16
3416 3581 5.045724 AGAGGAATAGAGGATGATGATTGGC 60.046 44.000 0.00 0.00 0.00 4.52
3417 3582 3.937706 GGAATAGAGGATGATGATTGGCG 59.062 47.826 0.00 0.00 0.00 5.69
3418 3583 4.564406 GGAATAGAGGATGATGATTGGCGT 60.564 45.833 0.00 0.00 0.00 5.68
3419 3584 5.337571 GGAATAGAGGATGATGATTGGCGTA 60.338 44.000 0.00 0.00 0.00 4.42
3420 3585 5.745312 ATAGAGGATGATGATTGGCGTAA 57.255 39.130 0.00 0.00 0.00 3.18
3421 3586 4.630644 AGAGGATGATGATTGGCGTAAT 57.369 40.909 0.00 0.00 0.00 1.89
3422 3587 4.321718 AGAGGATGATGATTGGCGTAATG 58.678 43.478 0.00 0.00 0.00 1.90
3423 3588 2.816087 AGGATGATGATTGGCGTAATGC 59.184 45.455 0.00 0.00 45.38 3.56
3441 3606 9.694520 GCGTAATGCAGTGAATATATTATTGAG 57.305 33.333 0.00 0.00 45.45 3.02
3446 3611 8.748380 TGCAGTGAATATATTATTGAGTCTCG 57.252 34.615 0.00 0.00 0.00 4.04
3447 3612 8.576442 TGCAGTGAATATATTATTGAGTCTCGA 58.424 33.333 0.00 0.00 0.00 4.04
3448 3613 9.071221 GCAGTGAATATATTATTGAGTCTCGAG 57.929 37.037 5.93 5.93 0.00 4.04
3449 3614 9.566530 CAGTGAATATATTATTGAGTCTCGAGG 57.433 37.037 13.56 0.00 0.00 4.63
3450 3615 8.744652 AGTGAATATATTATTGAGTCTCGAGGG 58.255 37.037 13.56 0.00 0.00 4.30
3451 3616 8.524487 GTGAATATATTATTGAGTCTCGAGGGT 58.476 37.037 13.56 0.00 0.00 4.34
3452 3617 8.523658 TGAATATATTATTGAGTCTCGAGGGTG 58.476 37.037 13.56 0.00 0.00 4.61
3453 3618 8.651589 AATATATTATTGAGTCTCGAGGGTGA 57.348 34.615 13.56 0.00 0.00 4.02
3454 3619 4.927978 ATTATTGAGTCTCGAGGGTGAG 57.072 45.455 13.56 0.00 37.33 3.51
3455 3620 2.223803 ATTGAGTCTCGAGGGTGAGT 57.776 50.000 13.56 0.00 37.28 3.41
3456 3621 2.873094 TTGAGTCTCGAGGGTGAGTA 57.127 50.000 13.56 0.00 37.28 2.59
3457 3622 3.367646 TTGAGTCTCGAGGGTGAGTAT 57.632 47.619 13.56 0.00 37.28 2.12
3458 3623 4.498894 TTGAGTCTCGAGGGTGAGTATA 57.501 45.455 13.56 0.00 37.28 1.47
3459 3624 4.708576 TGAGTCTCGAGGGTGAGTATAT 57.291 45.455 13.56 0.00 37.28 0.86
3460 3625 5.050126 TGAGTCTCGAGGGTGAGTATATT 57.950 43.478 13.56 0.00 37.28 1.28
3461 3626 5.446860 TGAGTCTCGAGGGTGAGTATATTT 58.553 41.667 13.56 0.00 37.28 1.40
3462 3627 5.892119 TGAGTCTCGAGGGTGAGTATATTTT 59.108 40.000 13.56 0.00 37.28 1.82
3463 3628 6.150396 AGTCTCGAGGGTGAGTATATTTTG 57.850 41.667 13.56 0.00 37.28 2.44
3464 3629 5.892119 AGTCTCGAGGGTGAGTATATTTTGA 59.108 40.000 13.56 0.00 37.28 2.69
3465 3630 6.039941 AGTCTCGAGGGTGAGTATATTTTGAG 59.960 42.308 13.56 0.00 37.28 3.02
3466 3631 5.892119 TCTCGAGGGTGAGTATATTTTGAGT 59.108 40.000 13.56 0.00 37.28 3.41
3467 3632 7.013083 GTCTCGAGGGTGAGTATATTTTGAGTA 59.987 40.741 13.56 0.00 37.28 2.59
3468 3633 7.013083 TCTCGAGGGTGAGTATATTTTGAGTAC 59.987 40.741 13.56 0.00 37.28 2.73
3469 3634 6.040166 TCGAGGGTGAGTATATTTTGAGTACC 59.960 42.308 0.00 0.00 0.00 3.34
3470 3635 6.183360 CGAGGGTGAGTATATTTTGAGTACCA 60.183 42.308 0.00 0.00 0.00 3.25
3471 3636 7.504926 AGGGTGAGTATATTTTGAGTACCAA 57.495 36.000 0.00 0.00 0.00 3.67
3472 3637 7.924541 AGGGTGAGTATATTTTGAGTACCAAA 58.075 34.615 5.67 5.67 42.56 3.28
3491 3656 5.629079 CAAAATTGGAGGACTAAGACACC 57.371 43.478 0.00 0.00 0.00 4.16
3492 3657 5.316987 CAAAATTGGAGGACTAAGACACCT 58.683 41.667 0.00 0.00 36.68 4.00
3493 3658 4.828072 AATTGGAGGACTAAGACACCTC 57.172 45.455 0.00 0.00 46.44 3.85
3498 3663 4.506937 GAGGACTAAGACACCTCCTAGA 57.493 50.000 0.00 0.00 42.84 2.43
3499 3664 4.457466 GAGGACTAAGACACCTCCTAGAG 58.543 52.174 0.00 0.00 42.84 2.43
3500 3665 4.113085 AGGACTAAGACACCTCCTAGAGA 58.887 47.826 0.00 0.00 30.91 3.10
3501 3666 4.729881 AGGACTAAGACACCTCCTAGAGAT 59.270 45.833 0.00 0.00 30.91 2.75
3502 3667 5.912354 AGGACTAAGACACCTCCTAGAGATA 59.088 44.000 0.00 0.00 30.91 1.98
3503 3668 6.390461 AGGACTAAGACACCTCCTAGAGATAA 59.610 42.308 0.00 0.00 30.91 1.75
3504 3669 6.713450 GGACTAAGACACCTCCTAGAGATAAG 59.287 46.154 0.00 0.00 0.00 1.73
3505 3670 7.420446 GGACTAAGACACCTCCTAGAGATAAGA 60.420 44.444 0.00 0.00 0.00 2.10
3506 3671 8.052621 ACTAAGACACCTCCTAGAGATAAGAT 57.947 38.462 0.00 0.00 0.00 2.40
3507 3672 7.942341 ACTAAGACACCTCCTAGAGATAAGATG 59.058 40.741 0.00 0.00 0.00 2.90
3508 3673 5.640147 AGACACCTCCTAGAGATAAGATGG 58.360 45.833 0.00 0.00 0.00 3.51
3509 3674 5.374154 AGACACCTCCTAGAGATAAGATGGA 59.626 44.000 0.00 0.00 0.00 3.41
3510 3675 6.031964 ACACCTCCTAGAGATAAGATGGAA 57.968 41.667 0.00 0.00 0.00 3.53
3511 3676 6.444704 ACACCTCCTAGAGATAAGATGGAAA 58.555 40.000 0.00 0.00 0.00 3.13
3512 3677 6.325286 ACACCTCCTAGAGATAAGATGGAAAC 59.675 42.308 0.00 0.00 0.00 2.78
3532 3697 9.919416 TGGAAACAATTTCTATCTAATCATGGA 57.081 29.630 0.00 0.00 39.59 3.41
3539 3704 9.525826 AATTTCTATCTAATCATGGACAATCCC 57.474 33.333 0.00 0.00 35.03 3.85
3540 3705 7.878621 TTCTATCTAATCATGGACAATCCCT 57.121 36.000 0.00 0.00 35.03 4.20
3541 3706 8.972662 TTCTATCTAATCATGGACAATCCCTA 57.027 34.615 0.00 0.00 35.03 3.53
3542 3707 8.972662 TCTATCTAATCATGGACAATCCCTAA 57.027 34.615 0.00 0.00 35.03 2.69
3543 3708 8.816894 TCTATCTAATCATGGACAATCCCTAAC 58.183 37.037 0.00 0.00 35.03 2.34
3544 3709 7.639062 ATCTAATCATGGACAATCCCTAACT 57.361 36.000 0.00 0.00 35.03 2.24
3545 3710 8.742125 ATCTAATCATGGACAATCCCTAACTA 57.258 34.615 0.00 0.00 35.03 2.24
3546 3711 7.963532 TCTAATCATGGACAATCCCTAACTAC 58.036 38.462 0.00 0.00 35.03 2.73
3547 3712 5.568620 ATCATGGACAATCCCTAACTACC 57.431 43.478 0.00 0.00 35.03 3.18
3548 3713 4.367166 TCATGGACAATCCCTAACTACCA 58.633 43.478 0.00 0.00 35.03 3.25
3549 3714 4.785914 TCATGGACAATCCCTAACTACCAA 59.214 41.667 0.00 0.00 35.03 3.67
3550 3715 5.251932 TCATGGACAATCCCTAACTACCAAA 59.748 40.000 0.00 0.00 35.03 3.28
3551 3716 5.789574 TGGACAATCCCTAACTACCAAAT 57.210 39.130 0.00 0.00 35.03 2.32
3552 3717 6.894735 TGGACAATCCCTAACTACCAAATA 57.105 37.500 0.00 0.00 35.03 1.40
3553 3718 7.460214 TGGACAATCCCTAACTACCAAATAT 57.540 36.000 0.00 0.00 35.03 1.28
3554 3719 8.570038 TGGACAATCCCTAACTACCAAATATA 57.430 34.615 0.00 0.00 35.03 0.86
3555 3720 9.177927 TGGACAATCCCTAACTACCAAATATAT 57.822 33.333 0.00 0.00 35.03 0.86
3556 3721 9.668497 GGACAATCCCTAACTACCAAATATATC 57.332 37.037 0.00 0.00 0.00 1.63
3568 3733 9.047947 ACTACCAAATATATCTCTAACATCCCC 57.952 37.037 0.00 0.00 0.00 4.81
3569 3734 7.272144 ACCAAATATATCTCTAACATCCCCC 57.728 40.000 0.00 0.00 0.00 5.40
3570 3735 6.070194 ACCAAATATATCTCTAACATCCCCCG 60.070 42.308 0.00 0.00 0.00 5.73
3571 3736 5.615925 AATATATCTCTAACATCCCCCGC 57.384 43.478 0.00 0.00 0.00 6.13
3572 3737 2.391926 TATCTCTAACATCCCCCGCA 57.608 50.000 0.00 0.00 0.00 5.69
3573 3738 1.507140 ATCTCTAACATCCCCCGCAA 58.493 50.000 0.00 0.00 0.00 4.85
3574 3739 1.507140 TCTCTAACATCCCCCGCAAT 58.493 50.000 0.00 0.00 0.00 3.56
3575 3740 1.416401 TCTCTAACATCCCCCGCAATC 59.584 52.381 0.00 0.00 0.00 2.67
3576 3741 0.105964 TCTAACATCCCCCGCAATCG 59.894 55.000 0.00 0.00 0.00 3.34
3577 3742 0.179056 CTAACATCCCCCGCAATCGT 60.179 55.000 0.00 0.00 0.00 3.73
3578 3743 1.069513 CTAACATCCCCCGCAATCGTA 59.930 52.381 0.00 0.00 0.00 3.43
3579 3744 0.179056 AACATCCCCCGCAATCGTAG 60.179 55.000 0.00 0.00 0.00 3.51
3580 3745 1.046472 ACATCCCCCGCAATCGTAGA 61.046 55.000 0.00 0.00 45.75 2.59
3581 3746 0.105964 CATCCCCCGCAATCGTAGAA 59.894 55.000 0.00 0.00 43.58 2.10
3582 3747 0.106149 ATCCCCCGCAATCGTAGAAC 59.894 55.000 0.00 0.00 43.58 3.01
3583 3748 1.219664 CCCCCGCAATCGTAGAACA 59.780 57.895 0.00 0.00 43.58 3.18
3584 3749 0.391927 CCCCCGCAATCGTAGAACAA 60.392 55.000 0.00 0.00 43.58 2.83
3585 3750 0.725117 CCCCGCAATCGTAGAACAAC 59.275 55.000 0.00 0.00 43.58 3.32
3586 3751 1.434555 CCCGCAATCGTAGAACAACA 58.565 50.000 0.00 0.00 43.58 3.33
3587 3752 1.127951 CCCGCAATCGTAGAACAACAC 59.872 52.381 0.00 0.00 43.58 3.32
3588 3753 1.201769 CCGCAATCGTAGAACAACACG 60.202 52.381 0.00 0.00 43.58 4.49
3594 3759 2.990941 TCGTAGAACAACACGAGTGTC 58.009 47.619 9.48 0.00 44.13 3.67
3595 3760 1.707117 CGTAGAACAACACGAGTGTCG 59.293 52.381 9.48 0.59 44.13 4.35
3596 3761 1.450905 GTAGAACAACACGAGTGTCGC 59.549 52.381 9.48 0.35 45.12 5.19
3597 3762 0.179121 AGAACAACACGAGTGTCGCA 60.179 50.000 9.48 0.00 45.12 5.10
3598 3763 0.229753 GAACAACACGAGTGTCGCAG 59.770 55.000 9.48 3.46 45.12 5.18
3599 3764 0.179121 AACAACACGAGTGTCGCAGA 60.179 50.000 9.48 0.00 45.12 4.26
3611 3776 1.880894 TCGCAGACGGTTAGACTGG 59.119 57.895 0.00 0.00 41.73 4.00
3612 3777 0.607217 TCGCAGACGGTTAGACTGGA 60.607 55.000 0.00 0.00 41.73 3.86
3613 3778 0.242825 CGCAGACGGTTAGACTGGAA 59.757 55.000 0.00 0.00 41.73 3.53
3614 3779 1.336517 CGCAGACGGTTAGACTGGAAA 60.337 52.381 0.00 0.00 41.73 3.13
3615 3780 2.762745 GCAGACGGTTAGACTGGAAAA 58.237 47.619 0.00 0.00 41.73 2.29
3616 3781 3.135994 GCAGACGGTTAGACTGGAAAAA 58.864 45.455 0.00 0.00 41.73 1.94
3631 3796 2.477880 AAAAATAGCAGCCGACGGG 58.522 52.632 17.22 0.14 0.00 5.28
3641 3806 3.461773 CCGACGGGCTGACATCCT 61.462 66.667 5.81 0.00 0.00 3.24
3642 3807 2.105128 CGACGGGCTGACATCCTC 59.895 66.667 0.00 0.00 0.00 3.71
3643 3808 2.501610 GACGGGCTGACATCCTCC 59.498 66.667 0.00 0.00 0.00 4.30
3644 3809 3.083997 ACGGGCTGACATCCTCCC 61.084 66.667 0.00 0.00 35.42 4.30
3645 3810 3.083349 CGGGCTGACATCCTCCCA 61.083 66.667 0.00 0.00 38.68 4.37
3646 3811 2.592308 GGGCTGACATCCTCCCAC 59.408 66.667 0.00 0.00 38.62 4.61
3647 3812 2.300967 GGGCTGACATCCTCCCACA 61.301 63.158 0.00 0.00 38.62 4.17
3648 3813 1.222936 GGCTGACATCCTCCCACAG 59.777 63.158 0.00 0.00 0.00 3.66
3649 3814 1.557269 GGCTGACATCCTCCCACAGT 61.557 60.000 0.00 0.00 0.00 3.55
3650 3815 0.107945 GCTGACATCCTCCCACAGTC 60.108 60.000 0.00 0.00 0.00 3.51
3651 3816 0.174389 CTGACATCCTCCCACAGTCG 59.826 60.000 0.00 0.00 32.08 4.18
3652 3817 0.541998 TGACATCCTCCCACAGTCGT 60.542 55.000 0.00 0.00 32.08 4.34
3653 3818 1.272258 TGACATCCTCCCACAGTCGTA 60.272 52.381 0.00 0.00 32.08 3.43
3654 3819 1.134560 GACATCCTCCCACAGTCGTAC 59.865 57.143 0.00 0.00 0.00 3.67
3655 3820 0.460311 CATCCTCCCACAGTCGTACC 59.540 60.000 0.00 0.00 0.00 3.34
3656 3821 0.686769 ATCCTCCCACAGTCGTACCC 60.687 60.000 0.00 0.00 0.00 3.69
3657 3822 2.707849 CCTCCCACAGTCGTACCCG 61.708 68.421 0.00 0.00 0.00 5.28
3658 3823 2.677524 TCCCACAGTCGTACCCGG 60.678 66.667 0.00 0.00 33.95 5.73
3659 3824 2.677524 CCCACAGTCGTACCCGGA 60.678 66.667 0.73 0.00 33.95 5.14
3660 3825 2.707849 CCCACAGTCGTACCCGGAG 61.708 68.421 0.73 0.00 33.95 4.63
3661 3826 2.181021 CACAGTCGTACCCGGAGC 59.819 66.667 0.73 0.00 33.95 4.70
3662 3827 2.282674 ACAGTCGTACCCGGAGCA 60.283 61.111 0.73 0.00 33.95 4.26
3663 3828 1.681327 ACAGTCGTACCCGGAGCAT 60.681 57.895 0.73 0.00 33.95 3.79
3664 3829 1.065928 CAGTCGTACCCGGAGCATC 59.934 63.158 0.73 0.00 33.95 3.91
3665 3830 2.025727 GTCGTACCCGGAGCATCG 59.974 66.667 0.73 0.12 34.37 3.84
3666 3831 2.438975 TCGTACCCGGAGCATCGT 60.439 61.111 0.73 0.00 34.37 3.73
3667 3832 2.278596 CGTACCCGGAGCATCGTG 60.279 66.667 0.73 0.00 34.37 4.35
3668 3833 2.106332 GTACCCGGAGCATCGTGG 59.894 66.667 0.73 0.00 34.37 4.94
3669 3834 2.043752 TACCCGGAGCATCGTGGA 60.044 61.111 0.73 0.00 33.59 4.02
3670 3835 2.420568 TACCCGGAGCATCGTGGAC 61.421 63.158 0.73 0.00 33.59 4.02
3671 3836 4.873129 CCCGGAGCATCGTGGACG 62.873 72.222 0.73 0.00 41.45 4.79
3672 3837 4.873129 CCGGAGCATCGTGGACGG 62.873 72.222 0.00 0.00 40.29 4.79
3673 3838 4.129737 CGGAGCATCGTGGACGGT 62.130 66.667 0.00 0.00 40.29 4.83
3988 4153 2.231215 ACTCCAGAAGCGCATGATAC 57.769 50.000 11.47 0.00 0.00 2.24
3989 4154 1.759445 ACTCCAGAAGCGCATGATACT 59.241 47.619 11.47 0.00 0.00 2.12
3990 4155 2.133553 CTCCAGAAGCGCATGATACTG 58.866 52.381 11.47 9.13 0.00 2.74
3991 4156 0.585357 CCAGAAGCGCATGATACTGC 59.415 55.000 11.47 0.00 38.81 4.40
3992 4157 1.579698 CAGAAGCGCATGATACTGCT 58.420 50.000 11.47 0.00 40.06 4.24
3993 4158 2.546584 CCAGAAGCGCATGATACTGCTA 60.547 50.000 11.47 0.00 40.06 3.49
3994 4159 2.730404 CAGAAGCGCATGATACTGCTAG 59.270 50.000 11.47 0.00 40.06 3.42
3995 4160 2.064762 GAAGCGCATGATACTGCTAGG 58.935 52.381 11.47 0.00 40.06 3.02
3996 4161 1.332195 AGCGCATGATACTGCTAGGA 58.668 50.000 11.47 0.00 40.06 2.94
3997 4162 1.271934 AGCGCATGATACTGCTAGGAG 59.728 52.381 11.47 10.09 40.06 3.69
3998 4163 1.270826 GCGCATGATACTGCTAGGAGA 59.729 52.381 19.21 2.02 40.06 3.71
3999 4164 2.670789 GCGCATGATACTGCTAGGAGAG 60.671 54.545 19.21 0.00 40.06 3.20
4000 4165 2.816672 CGCATGATACTGCTAGGAGAGA 59.183 50.000 19.21 5.68 40.06 3.10
4001 4166 3.365868 CGCATGATACTGCTAGGAGAGAC 60.366 52.174 19.21 8.54 40.06 3.36
4002 4167 3.056891 GCATGATACTGCTAGGAGAGACC 60.057 52.174 19.21 4.73 39.12 3.85
4003 4168 3.231207 TGATACTGCTAGGAGAGACCC 57.769 52.381 19.21 3.05 40.05 4.46
4004 4169 2.514160 TGATACTGCTAGGAGAGACCCA 59.486 50.000 19.21 5.52 40.05 4.51
4005 4170 2.438800 TACTGCTAGGAGAGACCCAC 57.561 55.000 19.21 0.00 40.05 4.61
4006 4171 0.324830 ACTGCTAGGAGAGACCCACC 60.325 60.000 19.21 0.00 40.05 4.61
4007 4172 1.379977 TGCTAGGAGAGACCCACCG 60.380 63.158 0.00 0.00 40.05 4.94
4008 4173 2.787567 GCTAGGAGAGACCCACCGC 61.788 68.421 0.00 0.00 40.05 5.68
4009 4174 1.076632 CTAGGAGAGACCCACCGCT 60.077 63.158 0.00 0.00 40.05 5.52
4010 4175 0.183014 CTAGGAGAGACCCACCGCTA 59.817 60.000 0.00 0.00 40.05 4.26
4011 4176 0.627451 TAGGAGAGACCCACCGCTAA 59.373 55.000 0.00 0.00 40.05 3.09
4012 4177 0.032017 AGGAGAGACCCACCGCTAAT 60.032 55.000 0.00 0.00 40.05 1.73
4013 4178 0.105039 GGAGAGACCCACCGCTAATG 59.895 60.000 0.00 0.00 0.00 1.90
4014 4179 0.824759 GAGAGACCCACCGCTAATGT 59.175 55.000 0.00 0.00 0.00 2.71
4015 4180 1.207329 GAGAGACCCACCGCTAATGTT 59.793 52.381 0.00 0.00 0.00 2.71
4016 4181 1.066143 AGAGACCCACCGCTAATGTTG 60.066 52.381 0.00 0.00 0.00 3.33
4017 4182 0.676782 AGACCCACCGCTAATGTTGC 60.677 55.000 0.00 0.00 0.00 4.17
4018 4183 0.958382 GACCCACCGCTAATGTTGCA 60.958 55.000 0.00 0.00 0.00 4.08
4019 4184 0.538516 ACCCACCGCTAATGTTGCAA 60.539 50.000 0.00 0.00 0.00 4.08
4020 4185 0.171007 CCCACCGCTAATGTTGCAAG 59.829 55.000 0.00 0.00 0.00 4.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
83 84 9.277565 CGGAGTTTTGAACAACTATTAATCATG 57.722 33.333 0.00 0.00 37.11 3.07
84 85 9.010029 ACGGAGTTTTGAACAACTATTAATCAT 57.990 29.630 0.00 0.00 37.78 2.45
85 86 8.385898 ACGGAGTTTTGAACAACTATTAATCA 57.614 30.769 0.00 0.00 37.78 2.57
104 105 6.196649 CAGGACTTGTAAACTGAAACGGAGT 61.197 44.000 0.00 0.00 35.90 3.85
105 106 4.211374 CAGGACTTGTAAACTGAAACGGAG 59.789 45.833 0.00 0.00 32.86 4.63
106 107 4.124238 CAGGACTTGTAAACTGAAACGGA 58.876 43.478 0.00 0.00 32.86 4.69
107 108 3.303791 GCAGGACTTGTAAACTGAAACGG 60.304 47.826 0.00 0.00 32.86 4.44
108 109 3.603857 CGCAGGACTTGTAAACTGAAACG 60.604 47.826 0.00 0.00 32.86 3.60
109 110 3.848554 GCGCAGGACTTGTAAACTGAAAC 60.849 47.826 0.30 0.00 32.86 2.78
110 111 2.289547 GCGCAGGACTTGTAAACTGAAA 59.710 45.455 0.30 0.00 32.86 2.69
111 112 1.871039 GCGCAGGACTTGTAAACTGAA 59.129 47.619 0.30 0.00 32.86 3.02
112 113 1.508632 GCGCAGGACTTGTAAACTGA 58.491 50.000 0.30 0.00 32.86 3.41
113 114 0.163788 CGCGCAGGACTTGTAAACTG 59.836 55.000 8.75 0.00 0.00 3.16
114 115 0.249741 ACGCGCAGGACTTGTAAACT 60.250 50.000 5.73 0.00 0.00 2.66
115 116 1.421382 TACGCGCAGGACTTGTAAAC 58.579 50.000 5.73 0.00 0.00 2.01
116 117 2.373540 ATACGCGCAGGACTTGTAAA 57.626 45.000 5.73 0.00 0.00 2.01
117 118 2.480073 GGTATACGCGCAGGACTTGTAA 60.480 50.000 5.73 0.00 0.00 2.41
118 119 1.066002 GGTATACGCGCAGGACTTGTA 59.934 52.381 5.73 0.00 0.00 2.41
119 120 0.179119 GGTATACGCGCAGGACTTGT 60.179 55.000 5.73 0.00 0.00 3.16
120 121 0.102481 AGGTATACGCGCAGGACTTG 59.898 55.000 5.73 0.00 0.00 3.16
121 122 1.607628 CTAGGTATACGCGCAGGACTT 59.392 52.381 5.73 0.00 0.00 3.01
122 123 1.236628 CTAGGTATACGCGCAGGACT 58.763 55.000 5.73 1.68 0.00 3.85
123 124 0.240411 CCTAGGTATACGCGCAGGAC 59.760 60.000 5.73 0.00 0.00 3.85
124 125 0.179009 ACCTAGGTATACGCGCAGGA 60.179 55.000 14.41 0.00 0.00 3.86
125 126 0.672342 AACCTAGGTATACGCGCAGG 59.328 55.000 16.67 6.39 0.00 4.85
126 127 1.767289 CAACCTAGGTATACGCGCAG 58.233 55.000 16.67 2.42 0.00 5.18
127 128 0.249155 GCAACCTAGGTATACGCGCA 60.249 55.000 16.67 0.00 0.00 6.09
128 129 0.249155 TGCAACCTAGGTATACGCGC 60.249 55.000 16.67 11.52 0.00 6.86
129 130 2.212869 TTGCAACCTAGGTATACGCG 57.787 50.000 16.67 3.53 0.00 6.01
130 131 6.425721 TGATAAATTGCAACCTAGGTATACGC 59.574 38.462 16.67 15.74 0.00 4.42
131 132 7.956420 TGATAAATTGCAACCTAGGTATACG 57.044 36.000 16.67 5.52 0.00 3.06
132 133 8.947115 GGATGATAAATTGCAACCTAGGTATAC 58.053 37.037 16.67 8.33 0.00 1.47
133 134 8.890472 AGGATGATAAATTGCAACCTAGGTATA 58.110 33.333 16.67 1.31 35.79 1.47
134 135 7.759607 AGGATGATAAATTGCAACCTAGGTAT 58.240 34.615 16.67 1.27 35.79 2.73
135 136 7.149202 AGGATGATAAATTGCAACCTAGGTA 57.851 36.000 16.67 0.00 35.79 3.08
136 137 6.018433 AGGATGATAAATTGCAACCTAGGT 57.982 37.500 9.21 9.21 35.79 3.08
137 138 8.641498 ATTAGGATGATAAATTGCAACCTAGG 57.359 34.615 7.41 7.41 39.63 3.02
184 185 9.211485 CGGAGTTTCTACTTTCAAAAGGTATAA 57.789 33.333 7.37 0.00 40.31 0.98
185 186 8.587608 TCGGAGTTTCTACTTTCAAAAGGTATA 58.412 33.333 7.37 0.00 40.31 1.47
186 187 7.447594 TCGGAGTTTCTACTTTCAAAAGGTAT 58.552 34.615 7.37 0.00 40.31 2.73
187 188 6.819284 TCGGAGTTTCTACTTTCAAAAGGTA 58.181 36.000 7.37 0.00 40.31 3.08
188 189 5.677567 TCGGAGTTTCTACTTTCAAAAGGT 58.322 37.500 7.37 0.00 40.31 3.50
189 190 6.260271 ACTTCGGAGTTTCTACTTTCAAAAGG 59.740 38.462 7.37 0.00 34.81 3.11
190 191 7.247929 ACTTCGGAGTTTCTACTTTCAAAAG 57.752 36.000 0.00 0.97 35.92 2.27
191 192 7.619964 AACTTCGGAGTTTCTACTTTCAAAA 57.380 32.000 2.29 0.00 43.48 2.44
205 206 9.457436 AAAATATACCAACATAAACTTCGGAGT 57.543 29.630 0.00 0.00 37.87 3.85
239 240 9.920946 ATTTGACCAACCTAATACAAGTCATAT 57.079 29.630 0.00 0.00 33.21 1.78
240 241 9.747898 AATTTGACCAACCTAATACAAGTCATA 57.252 29.630 0.00 0.00 33.21 2.15
241 242 8.522830 CAATTTGACCAACCTAATACAAGTCAT 58.477 33.333 0.00 0.00 33.21 3.06
242 243 7.721842 TCAATTTGACCAACCTAATACAAGTCA 59.278 33.333 0.00 0.00 0.00 3.41
243 244 8.021396 GTCAATTTGACCAACCTAATACAAGTC 58.979 37.037 17.07 0.00 41.37 3.01
244 245 7.308348 CGTCAATTTGACCAACCTAATACAAGT 60.308 37.037 20.87 0.00 44.20 3.16
245 246 7.021196 CGTCAATTTGACCAACCTAATACAAG 58.979 38.462 20.87 1.46 44.20 3.16
246 247 6.711194 TCGTCAATTTGACCAACCTAATACAA 59.289 34.615 20.87 0.00 44.20 2.41
247 248 6.231951 TCGTCAATTTGACCAACCTAATACA 58.768 36.000 20.87 0.00 44.20 2.29
248 249 6.730960 TCGTCAATTTGACCAACCTAATAC 57.269 37.500 20.87 0.00 44.20 1.89
249 250 7.335627 AGATCGTCAATTTGACCAACCTAATA 58.664 34.615 20.87 0.16 44.20 0.98
250 251 6.180472 AGATCGTCAATTTGACCAACCTAAT 58.820 36.000 20.87 6.17 44.20 1.73
251 252 5.556915 AGATCGTCAATTTGACCAACCTAA 58.443 37.500 20.87 2.23 44.20 2.69
252 253 5.160607 AGATCGTCAATTTGACCAACCTA 57.839 39.130 20.87 3.68 44.20 3.08
253 254 4.021102 AGATCGTCAATTTGACCAACCT 57.979 40.909 20.87 11.55 44.20 3.50
254 255 4.332819 CCTAGATCGTCAATTTGACCAACC 59.667 45.833 20.87 9.81 44.20 3.77
255 256 4.332819 CCCTAGATCGTCAATTTGACCAAC 59.667 45.833 20.87 9.60 44.20 3.77
256 257 4.513442 CCCTAGATCGTCAATTTGACCAA 58.487 43.478 20.87 11.64 44.20 3.67
257 258 3.118408 CCCCTAGATCGTCAATTTGACCA 60.118 47.826 20.87 11.17 44.20 4.02
258 259 3.118371 ACCCCTAGATCGTCAATTTGACC 60.118 47.826 20.87 9.44 44.20 4.02
259 260 4.138487 ACCCCTAGATCGTCAATTTGAC 57.862 45.455 17.76 17.76 43.65 3.18
260 261 4.202080 CGTACCCCTAGATCGTCAATTTGA 60.202 45.833 0.00 0.00 0.00 2.69
261 262 4.049186 CGTACCCCTAGATCGTCAATTTG 58.951 47.826 0.00 0.00 0.00 2.32
262 263 3.492137 GCGTACCCCTAGATCGTCAATTT 60.492 47.826 0.00 0.00 0.00 1.82
263 264 2.035576 GCGTACCCCTAGATCGTCAATT 59.964 50.000 0.00 0.00 0.00 2.32
264 265 1.612463 GCGTACCCCTAGATCGTCAAT 59.388 52.381 0.00 0.00 0.00 2.57
265 266 1.027357 GCGTACCCCTAGATCGTCAA 58.973 55.000 0.00 0.00 0.00 3.18
266 267 1.162181 CGCGTACCCCTAGATCGTCA 61.162 60.000 0.00 0.00 0.00 4.35
267 268 1.573436 CGCGTACCCCTAGATCGTC 59.427 63.158 0.00 0.00 0.00 4.20
268 269 2.550101 GCGCGTACCCCTAGATCGT 61.550 63.158 8.43 0.00 0.00 3.73
269 270 2.254651 GCGCGTACCCCTAGATCG 59.745 66.667 8.43 0.00 0.00 3.69
270 271 1.007618 GTGCGCGTACCCCTAGATC 60.008 63.158 17.10 0.00 0.00 2.75
271 272 2.842256 CGTGCGCGTACCCCTAGAT 61.842 63.158 21.71 0.00 0.00 1.98
272 273 3.511595 CGTGCGCGTACCCCTAGA 61.512 66.667 21.71 0.00 0.00 2.43
279 280 4.781959 TACAGGGCGTGCGCGTAC 62.782 66.667 22.18 17.94 43.06 3.67
280 281 3.570621 TTTACAGGGCGTGCGCGTA 62.571 57.895 22.18 0.00 43.06 4.42
281 282 4.973055 TTTACAGGGCGTGCGCGT 62.973 61.111 22.18 2.94 43.06 6.01
282 283 4.439472 GTTTACAGGGCGTGCGCG 62.439 66.667 16.86 16.86 43.06 6.86
283 284 3.047877 AGTTTACAGGGCGTGCGC 61.048 61.111 7.17 8.17 41.06 6.09
284 285 1.626654 CTCAGTTTACAGGGCGTGCG 61.627 60.000 7.17 0.00 0.00 5.34
285 286 1.912371 GCTCAGTTTACAGGGCGTGC 61.912 60.000 7.17 0.00 0.00 5.34
286 287 1.626654 CGCTCAGTTTACAGGGCGTG 61.627 60.000 10.85 5.50 38.20 5.34
287 288 1.374252 CGCTCAGTTTACAGGGCGT 60.374 57.895 10.85 0.00 38.20 5.68
288 289 1.078759 CTCGCTCAGTTTACAGGGCG 61.079 60.000 12.58 12.58 43.22 6.13
289 290 0.246635 TCTCGCTCAGTTTACAGGGC 59.753 55.000 0.00 0.00 0.00 5.19
290 291 1.134965 CCTCTCGCTCAGTTTACAGGG 60.135 57.143 0.00 0.00 0.00 4.45
291 292 1.546476 ACCTCTCGCTCAGTTTACAGG 59.454 52.381 0.00 0.00 0.00 4.00
292 293 3.440872 ACTACCTCTCGCTCAGTTTACAG 59.559 47.826 0.00 0.00 0.00 2.74
293 294 3.418995 ACTACCTCTCGCTCAGTTTACA 58.581 45.455 0.00 0.00 0.00 2.41
294 295 4.201901 GGTACTACCTCTCGCTCAGTTTAC 60.202 50.000 0.00 0.00 34.73 2.01
295 296 3.944015 GGTACTACCTCTCGCTCAGTTTA 59.056 47.826 0.00 0.00 34.73 2.01
296 297 2.754002 GGTACTACCTCTCGCTCAGTTT 59.246 50.000 0.00 0.00 34.73 2.66
297 298 2.367486 GGTACTACCTCTCGCTCAGTT 58.633 52.381 0.00 0.00 34.73 3.16
298 299 2.041251 GGTACTACCTCTCGCTCAGT 57.959 55.000 0.00 0.00 34.73 3.41
309 310 6.346896 CCCTTTTCACATAAGAGGTACTACC 58.653 44.000 0.00 0.00 41.55 3.18
310 311 6.155737 TCCCCTTTTCACATAAGAGGTACTAC 59.844 42.308 0.00 0.00 41.55 2.73
311 312 6.266080 TCCCCTTTTCACATAAGAGGTACTA 58.734 40.000 0.00 0.00 41.55 1.82
313 314 5.431179 TCCCCTTTTCACATAAGAGGTAC 57.569 43.478 0.00 0.00 0.00 3.34
314 315 5.550403 ACTTCCCCTTTTCACATAAGAGGTA 59.450 40.000 0.00 0.00 0.00 3.08
315 316 4.354087 ACTTCCCCTTTTCACATAAGAGGT 59.646 41.667 0.00 0.00 0.00 3.85
316 317 4.923415 ACTTCCCCTTTTCACATAAGAGG 58.077 43.478 0.00 0.00 0.00 3.69
317 318 7.119846 CACTTACTTCCCCTTTTCACATAAGAG 59.880 40.741 0.00 0.00 0.00 2.85
318 319 6.940298 CACTTACTTCCCCTTTTCACATAAGA 59.060 38.462 0.00 0.00 0.00 2.10
319 320 6.151144 CCACTTACTTCCCCTTTTCACATAAG 59.849 42.308 0.00 0.00 0.00 1.73
320 321 6.007703 CCACTTACTTCCCCTTTTCACATAA 58.992 40.000 0.00 0.00 0.00 1.90
321 322 5.515886 CCCACTTACTTCCCCTTTTCACATA 60.516 44.000 0.00 0.00 0.00 2.29
322 323 4.407365 CCACTTACTTCCCCTTTTCACAT 58.593 43.478 0.00 0.00 0.00 3.21
323 324 3.435890 CCCACTTACTTCCCCTTTTCACA 60.436 47.826 0.00 0.00 0.00 3.58
324 325 3.154710 CCCACTTACTTCCCCTTTTCAC 58.845 50.000 0.00 0.00 0.00 3.18
325 326 3.057586 TCCCACTTACTTCCCCTTTTCA 58.942 45.455 0.00 0.00 0.00 2.69
326 327 3.687125 CTCCCACTTACTTCCCCTTTTC 58.313 50.000 0.00 0.00 0.00 2.29
327 328 2.225041 GCTCCCACTTACTTCCCCTTTT 60.225 50.000 0.00 0.00 0.00 2.27
328 329 1.354705 GCTCCCACTTACTTCCCCTTT 59.645 52.381 0.00 0.00 0.00 3.11
329 330 0.992695 GCTCCCACTTACTTCCCCTT 59.007 55.000 0.00 0.00 0.00 3.95
330 331 0.178873 TGCTCCCACTTACTTCCCCT 60.179 55.000 0.00 0.00 0.00 4.79
331 332 0.919710 ATGCTCCCACTTACTTCCCC 59.080 55.000 0.00 0.00 0.00 4.81
332 333 1.282157 ACATGCTCCCACTTACTTCCC 59.718 52.381 0.00 0.00 0.00 3.97
333 334 2.789409 ACATGCTCCCACTTACTTCC 57.211 50.000 0.00 0.00 0.00 3.46
334 335 5.488341 TCTTTACATGCTCCCACTTACTTC 58.512 41.667 0.00 0.00 0.00 3.01
335 336 5.499004 TCTTTACATGCTCCCACTTACTT 57.501 39.130 0.00 0.00 0.00 2.24
336 337 5.499004 TTCTTTACATGCTCCCACTTACT 57.501 39.130 0.00 0.00 0.00 2.24
337 338 5.106277 GGTTTCTTTACATGCTCCCACTTAC 60.106 44.000 0.00 0.00 0.00 2.34
338 339 5.007682 GGTTTCTTTACATGCTCCCACTTA 58.992 41.667 0.00 0.00 0.00 2.24
339 340 3.826729 GGTTTCTTTACATGCTCCCACTT 59.173 43.478 0.00 0.00 0.00 3.16
340 341 3.074538 AGGTTTCTTTACATGCTCCCACT 59.925 43.478 0.00 0.00 0.00 4.00
341 342 3.421844 AGGTTTCTTTACATGCTCCCAC 58.578 45.455 0.00 0.00 0.00 4.61
342 343 3.330701 AGAGGTTTCTTTACATGCTCCCA 59.669 43.478 0.00 0.00 0.00 4.37
343 344 3.956744 AGAGGTTTCTTTACATGCTCCC 58.043 45.455 0.00 0.00 0.00 4.30
344 345 7.631717 AATAAGAGGTTTCTTTACATGCTCC 57.368 36.000 0.00 0.00 40.79 4.70
592 593 9.812347 AGGGAAAATATTTCTCATGCATACATA 57.188 29.630 0.00 0.00 33.67 2.29
593 594 8.716674 AGGGAAAATATTTCTCATGCATACAT 57.283 30.769 0.00 0.00 36.79 2.29
594 595 9.812347 ATAGGGAAAATATTTCTCATGCATACA 57.188 29.630 0.00 0.00 0.00 2.29
597 598 9.812347 TGTATAGGGAAAATATTTCTCATGCAT 57.188 29.630 0.10 0.00 0.00 3.96
598 599 9.066892 GTGTATAGGGAAAATATTTCTCATGCA 57.933 33.333 0.10 0.00 0.00 3.96
599 600 9.066892 TGTGTATAGGGAAAATATTTCTCATGC 57.933 33.333 0.10 0.00 0.00 4.06
645 646 4.320641 GCGCCAGGACACTTTACATAAAAA 60.321 41.667 0.00 0.00 0.00 1.94
646 647 3.189702 GCGCCAGGACACTTTACATAAAA 59.810 43.478 0.00 0.00 0.00 1.52
647 648 2.745281 GCGCCAGGACACTTTACATAAA 59.255 45.455 0.00 0.00 0.00 1.40
648 649 2.027561 AGCGCCAGGACACTTTACATAA 60.028 45.455 2.29 0.00 0.00 1.90
649 650 1.553248 AGCGCCAGGACACTTTACATA 59.447 47.619 2.29 0.00 0.00 2.29
650 651 0.324943 AGCGCCAGGACACTTTACAT 59.675 50.000 2.29 0.00 0.00 2.29
651 652 0.602638 CAGCGCCAGGACACTTTACA 60.603 55.000 2.29 0.00 0.00 2.41
652 653 0.602905 ACAGCGCCAGGACACTTTAC 60.603 55.000 2.29 0.00 0.00 2.01
653 654 0.320421 GACAGCGCCAGGACACTTTA 60.320 55.000 2.29 0.00 0.00 1.85
654 655 1.598130 GACAGCGCCAGGACACTTT 60.598 57.895 2.29 0.00 0.00 2.66
655 656 2.031163 GACAGCGCCAGGACACTT 59.969 61.111 2.29 0.00 0.00 3.16
656 657 3.233980 TGACAGCGCCAGGACACT 61.234 61.111 2.29 0.00 0.00 3.55
657 658 3.044305 GTGACAGCGCCAGGACAC 61.044 66.667 2.29 7.48 0.00 3.67
658 659 4.662961 CGTGACAGCGCCAGGACA 62.663 66.667 2.29 0.00 0.00 4.02
666 667 3.767230 CGAACCAGCGTGACAGCG 61.767 66.667 0.00 0.00 43.00 5.18
667 668 2.355837 TCGAACCAGCGTGACAGC 60.356 61.111 0.00 0.00 37.41 4.40
668 669 0.597637 AACTCGAACCAGCGTGACAG 60.598 55.000 0.00 0.00 0.00 3.51
669 670 0.179094 AAACTCGAACCAGCGTGACA 60.179 50.000 0.00 0.00 0.00 3.58
670 671 0.507358 GAAACTCGAACCAGCGTGAC 59.493 55.000 0.00 0.00 0.00 3.67
671 672 0.599204 GGAAACTCGAACCAGCGTGA 60.599 55.000 0.00 0.00 0.00 4.35
672 673 0.600255 AGGAAACTCGAACCAGCGTG 60.600 55.000 0.00 0.00 32.90 5.34
682 683 2.029838 AAGCCAGCATAGGAAACTCG 57.970 50.000 0.00 0.00 43.67 4.18
689 690 1.684983 CAATGGGAAAGCCAGCATAGG 59.315 52.381 0.00 0.00 35.15 2.57
691 692 1.287442 TCCAATGGGAAAGCCAGCATA 59.713 47.619 0.00 0.00 41.32 3.14
692 693 0.041535 TCCAATGGGAAAGCCAGCAT 59.958 50.000 0.00 0.00 41.32 3.79
759 766 0.828762 TGCCCTGTGATTTGCTTGCT 60.829 50.000 0.00 0.00 0.00 3.91
957 1001 4.459089 GAGGTGAGGTGAGCGGGC 62.459 72.222 0.00 0.00 0.00 6.13
1294 1361 2.124983 CACATCCTCCACCCTGCG 60.125 66.667 0.00 0.00 0.00 5.18
1295 1362 2.439156 GCACATCCTCCACCCTGC 60.439 66.667 0.00 0.00 0.00 4.85
1390 1466 6.487689 AAATGTTTGAGAAAGGAGATCGAC 57.512 37.500 0.00 0.00 0.00 4.20
1451 1527 1.542030 GTTGCTTCTCTCACCTCTCGA 59.458 52.381 0.00 0.00 0.00 4.04
1454 1530 2.703007 AGTTGTTGCTTCTCTCACCTCT 59.297 45.455 0.00 0.00 0.00 3.69
1495 1576 5.191727 TCATAGCCTCCTTCATTTTGGAA 57.808 39.130 0.00 0.00 31.23 3.53
1496 1577 4.860802 TCATAGCCTCCTTCATTTTGGA 57.139 40.909 0.00 0.00 0.00 3.53
1498 1579 5.049818 GTCGATCATAGCCTCCTTCATTTTG 60.050 44.000 0.00 0.00 0.00 2.44
1504 1589 1.964223 TGGTCGATCATAGCCTCCTTC 59.036 52.381 0.00 0.00 0.00 3.46
1505 1590 1.689273 GTGGTCGATCATAGCCTCCTT 59.311 52.381 0.00 0.00 0.00 3.36
1506 1591 1.133325 AGTGGTCGATCATAGCCTCCT 60.133 52.381 0.00 0.00 0.00 3.69
1507 1592 1.271102 GAGTGGTCGATCATAGCCTCC 59.729 57.143 0.00 0.00 0.00 4.30
1509 1594 1.959985 CTGAGTGGTCGATCATAGCCT 59.040 52.381 0.00 0.00 0.00 4.58
1510 1595 1.604185 GCTGAGTGGTCGATCATAGCC 60.604 57.143 16.92 1.53 0.00 3.93
1511 1596 1.604185 GGCTGAGTGGTCGATCATAGC 60.604 57.143 18.58 18.58 0.00 2.97
1512 1597 1.683385 TGGCTGAGTGGTCGATCATAG 59.317 52.381 0.00 2.34 0.00 2.23
1513 1598 1.775385 TGGCTGAGTGGTCGATCATA 58.225 50.000 0.00 0.00 0.00 2.15
1515 1602 0.461548 GATGGCTGAGTGGTCGATCA 59.538 55.000 0.00 0.00 0.00 2.92
1529 1616 1.565156 TTTGTCACACGAGCGATGGC 61.565 55.000 0.00 0.00 40.37 4.40
1530 1617 1.061131 GATTTGTCACACGAGCGATGG 59.939 52.381 0.00 0.00 0.00 3.51
1552 1639 3.242969 GCATGTTGATGAGGTACTGCATG 60.243 47.826 5.87 0.00 41.55 4.06
1569 1656 0.252479 CTTGAGCCTCTGGAGCATGT 59.748 55.000 0.00 0.00 0.00 3.21
1606 1693 4.033358 GCATAGTACTTTGCTAGCTGTGTG 59.967 45.833 25.46 10.64 35.20 3.82
1633 1723 1.351350 AGGGAACTGGAGCAAAGGTAC 59.649 52.381 0.00 0.00 41.13 3.34
1678 1768 9.739276 AGAACATAAACAAGATGTGAAATAGGA 57.261 29.630 0.00 0.00 37.59 2.94
1709 1823 0.523072 GGCTGAAATTTGCGAGCAGA 59.477 50.000 12.94 0.00 32.83 4.26
1792 1919 7.413767 GGTTAATAAGATGGTTTCCTTGTCGTC 60.414 40.741 0.00 0.00 0.00 4.20
1825 1952 3.420893 TCCTGCAATTCGTTGGAAGAAT 58.579 40.909 0.00 0.00 39.75 2.40
1828 1955 2.426522 TCTCCTGCAATTCGTTGGAAG 58.573 47.619 0.00 0.00 35.19 3.46
1829 1956 2.559698 TCTCCTGCAATTCGTTGGAA 57.440 45.000 0.00 0.00 36.41 3.53
1830 1957 2.787473 ATCTCCTGCAATTCGTTGGA 57.213 45.000 0.00 0.00 0.00 3.53
1831 1958 2.749076 TGAATCTCCTGCAATTCGTTGG 59.251 45.455 4.78 0.00 35.16 3.77
1832 1959 3.686241 TCTGAATCTCCTGCAATTCGTTG 59.314 43.478 4.78 0.00 35.16 4.10
1833 1960 3.942829 TCTGAATCTCCTGCAATTCGTT 58.057 40.909 4.78 0.00 35.16 3.85
1834 1961 3.616956 TCTGAATCTCCTGCAATTCGT 57.383 42.857 4.78 0.00 35.16 3.85
1939 2069 1.859135 GCGATCGCACGAACAAAGC 60.859 57.895 33.89 0.00 41.49 3.51
1953 2083 0.108804 AACACGATCAAGGTCGCGAT 60.109 50.000 14.06 0.00 45.12 4.58
1973 2103 0.108377 ACGCACACAGAGAACACACA 60.108 50.000 0.00 0.00 0.00 3.72
1981 2111 2.175078 GCATGCACGCACACAGAG 59.825 61.111 14.21 0.00 0.00 3.35
2035 2165 3.230743 TCTCGCAATTGTCGATCTCAA 57.769 42.857 20.01 3.39 35.25 3.02
2036 2166 2.939460 TCTCGCAATTGTCGATCTCA 57.061 45.000 20.01 7.11 35.25 3.27
2104 2234 5.521010 GGCAAATTTGTGGACATCATATGTG 59.479 40.000 19.03 3.41 45.03 3.21
2106 2236 5.909477 AGGCAAATTTGTGGACATCATATG 58.091 37.500 19.03 0.00 0.00 1.78
2107 2237 5.221106 CGAGGCAAATTTGTGGACATCATAT 60.221 40.000 19.03 0.00 0.00 1.78
2108 2238 4.096231 CGAGGCAAATTTGTGGACATCATA 59.904 41.667 19.03 0.00 0.00 2.15
2112 2242 1.545582 CCGAGGCAAATTTGTGGACAT 59.454 47.619 19.03 0.30 0.00 3.06
2138 2268 3.472652 AGTTGCACATGAAACTCCGTTA 58.527 40.909 0.00 0.00 39.71 3.18
2140 2270 1.967319 AGTTGCACATGAAACTCCGT 58.033 45.000 0.00 0.00 39.71 4.69
2257 2388 0.378257 TCGAAGATGGCCGTACGTAC 59.622 55.000 15.90 15.90 0.00 3.67
2258 2389 0.659427 CTCGAAGATGGCCGTACGTA 59.341 55.000 15.21 0.24 33.89 3.57
2259 2390 1.028330 TCTCGAAGATGGCCGTACGT 61.028 55.000 15.21 0.00 33.89 3.57
2260 2391 0.311165 ATCTCGAAGATGGCCGTACG 59.689 55.000 8.69 8.69 32.80 3.67
2268 2399 5.898606 GCGTTTAAATGTGATCTCGAAGATG 59.101 40.000 9.12 0.00 34.53 2.90
2301 2432 3.262936 CGCATTTTCCAGCGTGGA 58.737 55.556 3.02 3.02 46.61 4.02
2309 2440 0.534203 TAGGATCCCGCGCATTTTCC 60.534 55.000 8.55 8.31 0.00 3.13
2310 2441 0.586802 GTAGGATCCCGCGCATTTTC 59.413 55.000 8.55 0.00 0.00 2.29
2311 2442 1.157870 CGTAGGATCCCGCGCATTTT 61.158 55.000 8.55 0.00 0.00 1.82
2318 2449 2.928116 GCAATAATACGTAGGATCCCGC 59.072 50.000 8.55 0.00 0.00 6.13
2333 2464 5.480642 AACACATTGATGGTTGGCAATAA 57.519 34.783 1.92 0.00 33.68 1.40
2336 2470 3.133542 TCAAACACATTGATGGTTGGCAA 59.866 39.130 13.43 0.00 45.63 4.52
2347 2481 2.334971 TCTGCGCATCAAACACATTG 57.665 45.000 12.24 0.00 40.58 2.82
2348 2482 2.553602 TCTTCTGCGCATCAAACACATT 59.446 40.909 12.24 0.00 0.00 2.71
2350 2484 1.592064 TCTTCTGCGCATCAAACACA 58.408 45.000 12.24 0.00 0.00 3.72
2351 2485 2.907910 ATCTTCTGCGCATCAAACAC 57.092 45.000 12.24 0.00 0.00 3.32
2352 2486 3.503363 AGAAATCTTCTGCGCATCAAACA 59.497 39.130 12.24 0.00 38.91 2.83
2353 2487 4.088823 AGAAATCTTCTGCGCATCAAAC 57.911 40.909 12.24 0.00 38.91 2.93
2354 2488 4.726416 GAAGAAATCTTCTGCGCATCAAA 58.274 39.130 12.24 5.11 46.59 2.69
2375 2509 7.093814 CCAAGACAATCTTCATGGGTAAAATGA 60.094 37.037 0.00 0.00 33.78 2.57
2383 2517 1.402968 CGCCAAGACAATCTTCATGGG 59.597 52.381 0.00 0.00 33.78 4.00
2397 2533 0.734889 CCTACAAAGCCATCGCCAAG 59.265 55.000 0.00 0.00 34.57 3.61
2400 2536 2.481471 GCCCTACAAAGCCATCGCC 61.481 63.158 0.00 0.00 34.57 5.54
2402 2538 2.180204 CCGCCCTACAAAGCCATCG 61.180 63.158 0.00 0.00 0.00 3.84
2403 2539 1.823899 CCCGCCCTACAAAGCCATC 60.824 63.158 0.00 0.00 0.00 3.51
2404 2540 1.858739 TTCCCGCCCTACAAAGCCAT 61.859 55.000 0.00 0.00 0.00 4.40
2405 2541 2.530672 TTCCCGCCCTACAAAGCCA 61.531 57.895 0.00 0.00 0.00 4.75
2406 2542 2.044555 GTTCCCGCCCTACAAAGCC 61.045 63.158 0.00 0.00 0.00 4.35
2409 2545 1.294138 CTCGTTCCCGCCCTACAAA 59.706 57.895 0.00 0.00 0.00 2.83
2526 2662 3.699134 GATCTGGTGGCCGGGGTTC 62.699 68.421 2.18 0.00 0.00 3.62
2556 2692 1.889829 CTGAGGTAGATCATCGGGTCC 59.110 57.143 0.00 0.00 30.55 4.46
2587 2723 5.334105 CCGTGTGCATAGTAGGCAATTATTC 60.334 44.000 11.67 0.00 43.91 1.75
2588 2724 4.515191 CCGTGTGCATAGTAGGCAATTATT 59.485 41.667 11.67 0.00 43.91 1.40
2598 2734 1.132834 CCGTGTACCGTGTGCATAGTA 59.867 52.381 0.00 0.00 30.01 1.82
2599 2735 0.108992 CCGTGTACCGTGTGCATAGT 60.109 55.000 0.00 0.00 30.01 2.12
2600 2736 1.418342 GCCGTGTACCGTGTGCATAG 61.418 60.000 0.00 0.00 30.01 2.23
2602 2738 2.740826 GCCGTGTACCGTGTGCAT 60.741 61.111 0.00 0.00 30.01 3.96
2604 2740 2.968156 TTGCCGTGTACCGTGTGC 60.968 61.111 0.00 0.00 33.66 4.57
2606 2742 2.280321 GGTTGCCGTGTACCGTGT 60.280 61.111 0.00 0.00 33.66 4.49
2607 2743 2.029964 AGGTTGCCGTGTACCGTG 59.970 61.111 0.00 0.00 39.46 4.94
2608 2744 2.029964 CAGGTTGCCGTGTACCGT 59.970 61.111 0.00 0.00 39.46 4.83
2609 2745 1.736645 CTCAGGTTGCCGTGTACCG 60.737 63.158 0.00 0.00 39.46 4.02
2610 2746 0.604578 TACTCAGGTTGCCGTGTACC 59.395 55.000 0.00 0.00 34.54 3.34
2612 2755 0.604578 GGTACTCAGGTTGCCGTGTA 59.395 55.000 0.00 0.00 0.00 2.90
2619 2762 1.340248 ACGTGTCAGGTACTCAGGTTG 59.660 52.381 0.00 0.00 34.60 3.77
2620 2763 1.612463 GACGTGTCAGGTACTCAGGTT 59.388 52.381 0.00 0.00 34.60 3.50
2623 2766 3.577649 AATGACGTGTCAGGTACTCAG 57.422 47.619 8.82 0.00 43.61 3.35
2624 2767 4.077108 ACTAATGACGTGTCAGGTACTCA 58.923 43.478 8.82 0.00 43.61 3.41
2626 2769 6.561614 CATTACTAATGACGTGTCAGGTACT 58.438 40.000 8.82 4.02 43.61 2.73
2627 2770 5.231568 GCATTACTAATGACGTGTCAGGTAC 59.768 44.000 12.26 0.00 43.61 3.34
2628 2771 5.126545 AGCATTACTAATGACGTGTCAGGTA 59.873 40.000 12.26 8.49 43.61 3.08
2650 2793 8.853469 AAGTAATAGAACTCGTACACATTAGC 57.147 34.615 0.00 0.00 0.00 3.09
2661 2804 4.259850 GCTGCCGAAAAGTAATAGAACTCG 60.260 45.833 0.00 0.00 0.00 4.18
2663 2806 3.617263 CGCTGCCGAAAAGTAATAGAACT 59.383 43.478 0.00 0.00 36.29 3.01
2664 2807 3.615496 TCGCTGCCGAAAAGTAATAGAAC 59.385 43.478 0.00 0.00 41.17 3.01
2666 2809 3.184541 GTCGCTGCCGAAAAGTAATAGA 58.815 45.455 0.00 0.00 46.34 1.98
2667 2810 2.284417 GGTCGCTGCCGAAAAGTAATAG 59.716 50.000 0.00 0.00 46.34 1.73
2673 2816 3.788766 CGGGTCGCTGCCGAAAAG 61.789 66.667 0.00 0.00 46.34 2.27
2900 3043 3.386237 GCCTCGAGCTGGTCCTGT 61.386 66.667 6.99 0.00 38.99 4.00
2942 3085 3.374402 CTCTCGTCGCTGGTGGGT 61.374 66.667 0.00 0.00 0.00 4.51
3055 3201 3.553096 CCATGCTTAGGTCTGGACGATAC 60.553 52.174 0.00 0.00 0.00 2.24
3060 3210 0.811616 CGCCATGCTTAGGTCTGGAC 60.812 60.000 0.00 0.00 0.00 4.02
3064 3214 1.123077 TGATCGCCATGCTTAGGTCT 58.877 50.000 0.00 0.00 0.00 3.85
3173 3323 8.566008 AGCATTTGTTATGAATAAGATTTCGC 57.434 30.769 0.00 0.00 0.00 4.70
3191 3349 7.436080 ACATCTGCGGATTTTATTAAGCATTTG 59.564 33.333 4.93 0.00 33.96 2.32
3250 3408 7.328277 TGTATAAATGGACCACTGTAAATGC 57.672 36.000 0.00 0.00 0.00 3.56
3257 3418 7.630242 ACTTTGATGTATAAATGGACCACTG 57.370 36.000 0.00 0.00 0.00 3.66
3262 3423 7.639113 TGGGAACTTTGATGTATAAATGGAC 57.361 36.000 0.00 0.00 0.00 4.02
3264 3425 6.096705 TGCTGGGAACTTTGATGTATAAATGG 59.903 38.462 0.00 0.00 0.00 3.16
3265 3426 7.099266 TGCTGGGAACTTTGATGTATAAATG 57.901 36.000 0.00 0.00 0.00 2.32
3268 3429 5.417580 GGTTGCTGGGAACTTTGATGTATAA 59.582 40.000 5.09 0.00 0.00 0.98
3269 3430 4.947388 GGTTGCTGGGAACTTTGATGTATA 59.053 41.667 5.09 0.00 0.00 1.47
3272 3433 1.963515 GGTTGCTGGGAACTTTGATGT 59.036 47.619 5.09 0.00 0.00 3.06
3278 3439 0.759060 GTTGGGGTTGCTGGGAACTT 60.759 55.000 5.09 0.00 0.00 2.66
3280 3441 0.759060 AAGTTGGGGTTGCTGGGAAC 60.759 55.000 0.00 0.00 0.00 3.62
3292 3453 0.934436 CGTGCAAAGCGAAAGTTGGG 60.934 55.000 0.00 0.00 0.00 4.12
3296 3461 2.223479 ACAAATCGTGCAAAGCGAAAGT 60.223 40.909 1.79 0.00 41.84 2.66
3298 3463 2.483583 ACAAATCGTGCAAAGCGAAA 57.516 40.000 1.79 0.00 41.84 3.46
3302 3467 5.820926 TTTCAATACAAATCGTGCAAAGC 57.179 34.783 0.00 0.00 0.00 3.51
3329 3494 9.276590 CAAGCATCATCTATAAATAGGACAACA 57.723 33.333 0.00 0.00 0.00 3.33
3330 3495 8.725148 CCAAGCATCATCTATAAATAGGACAAC 58.275 37.037 0.00 0.00 0.00 3.32
3333 3498 9.160496 CTTCCAAGCATCATCTATAAATAGGAC 57.840 37.037 0.00 0.00 0.00 3.85
3337 3502 7.239563 TCCCCTTCCAAGCATCATCTATAAATA 59.760 37.037 0.00 0.00 0.00 1.40
3349 3514 1.970640 GTTGTTTCCCCTTCCAAGCAT 59.029 47.619 0.00 0.00 0.00 3.79
3381 3546 9.672673 CATCCTCTATTCCTCTTACAAAAAGAA 57.327 33.333 0.00 0.00 0.00 2.52
3382 3547 9.046846 TCATCCTCTATTCCTCTTACAAAAAGA 57.953 33.333 0.00 0.00 0.00 2.52
3383 3548 9.844257 ATCATCCTCTATTCCTCTTACAAAAAG 57.156 33.333 0.00 0.00 0.00 2.27
3384 3549 9.618890 CATCATCCTCTATTCCTCTTACAAAAA 57.381 33.333 0.00 0.00 0.00 1.94
3385 3550 8.992349 TCATCATCCTCTATTCCTCTTACAAAA 58.008 33.333 0.00 0.00 0.00 2.44
3386 3551 8.553085 TCATCATCCTCTATTCCTCTTACAAA 57.447 34.615 0.00 0.00 0.00 2.83
3387 3552 8.733092 ATCATCATCCTCTATTCCTCTTACAA 57.267 34.615 0.00 0.00 0.00 2.41
3388 3553 8.591940 CAATCATCATCCTCTATTCCTCTTACA 58.408 37.037 0.00 0.00 0.00 2.41
3389 3554 8.040132 CCAATCATCATCCTCTATTCCTCTTAC 58.960 40.741 0.00 0.00 0.00 2.34
3390 3555 7.310921 GCCAATCATCATCCTCTATTCCTCTTA 60.311 40.741 0.00 0.00 0.00 2.10
3391 3556 6.522114 GCCAATCATCATCCTCTATTCCTCTT 60.522 42.308 0.00 0.00 0.00 2.85
3392 3557 5.045724 GCCAATCATCATCCTCTATTCCTCT 60.046 44.000 0.00 0.00 0.00 3.69
3393 3558 5.184711 GCCAATCATCATCCTCTATTCCTC 58.815 45.833 0.00 0.00 0.00 3.71
3394 3559 4.323333 CGCCAATCATCATCCTCTATTCCT 60.323 45.833 0.00 0.00 0.00 3.36
3395 3560 3.937706 CGCCAATCATCATCCTCTATTCC 59.062 47.826 0.00 0.00 0.00 3.01
3396 3561 4.573900 ACGCCAATCATCATCCTCTATTC 58.426 43.478 0.00 0.00 0.00 1.75
3397 3562 4.630644 ACGCCAATCATCATCCTCTATT 57.369 40.909 0.00 0.00 0.00 1.73
3398 3563 5.745312 TTACGCCAATCATCATCCTCTAT 57.255 39.130 0.00 0.00 0.00 1.98
3399 3564 5.482006 CATTACGCCAATCATCATCCTCTA 58.518 41.667 0.00 0.00 0.00 2.43
3400 3565 4.321718 CATTACGCCAATCATCATCCTCT 58.678 43.478 0.00 0.00 0.00 3.69
3401 3566 3.120060 GCATTACGCCAATCATCATCCTC 60.120 47.826 0.00 0.00 32.94 3.71
3402 3567 2.816087 GCATTACGCCAATCATCATCCT 59.184 45.455 0.00 0.00 32.94 3.24
3403 3568 2.553602 TGCATTACGCCAATCATCATCC 59.446 45.455 0.00 0.00 41.33 3.51
3404 3569 3.251729 ACTGCATTACGCCAATCATCATC 59.748 43.478 0.00 0.00 41.33 2.92
3405 3570 3.004002 CACTGCATTACGCCAATCATCAT 59.996 43.478 0.00 0.00 41.33 2.45
3406 3571 2.355444 CACTGCATTACGCCAATCATCA 59.645 45.455 0.00 0.00 41.33 3.07
3407 3572 2.613595 TCACTGCATTACGCCAATCATC 59.386 45.455 0.00 0.00 41.33 2.92
3408 3573 2.642427 TCACTGCATTACGCCAATCAT 58.358 42.857 0.00 0.00 41.33 2.45
3409 3574 2.106477 TCACTGCATTACGCCAATCA 57.894 45.000 0.00 0.00 41.33 2.57
3410 3575 3.698029 ATTCACTGCATTACGCCAATC 57.302 42.857 0.00 0.00 41.33 2.67
3411 3576 7.452880 AATATATTCACTGCATTACGCCAAT 57.547 32.000 0.00 0.00 41.33 3.16
3412 3577 6.875948 AATATATTCACTGCATTACGCCAA 57.124 33.333 0.00 0.00 41.33 4.52
3413 3578 8.450180 CAATAATATATTCACTGCATTACGCCA 58.550 33.333 0.00 0.00 41.33 5.69
3414 3579 8.664798 TCAATAATATATTCACTGCATTACGCC 58.335 33.333 0.00 0.00 41.33 5.68
3415 3580 9.694520 CTCAATAATATATTCACTGCATTACGC 57.305 33.333 0.00 0.00 42.89 4.42
3420 3585 9.363763 CGAGACTCAATAATATATTCACTGCAT 57.636 33.333 0.00 0.00 0.00 3.96
3421 3586 8.576442 TCGAGACTCAATAATATATTCACTGCA 58.424 33.333 0.00 0.00 0.00 4.41
3422 3587 8.972262 TCGAGACTCAATAATATATTCACTGC 57.028 34.615 0.00 0.00 0.00 4.40
3423 3588 9.566530 CCTCGAGACTCAATAATATATTCACTG 57.433 37.037 15.71 0.00 0.00 3.66
3424 3589 8.744652 CCCTCGAGACTCAATAATATATTCACT 58.255 37.037 15.71 0.00 0.00 3.41
3425 3590 8.524487 ACCCTCGAGACTCAATAATATATTCAC 58.476 37.037 15.71 0.00 0.00 3.18
3426 3591 8.523658 CACCCTCGAGACTCAATAATATATTCA 58.476 37.037 15.71 0.00 0.00 2.57
3427 3592 8.740906 TCACCCTCGAGACTCAATAATATATTC 58.259 37.037 15.71 0.00 0.00 1.75
3428 3593 8.651589 TCACCCTCGAGACTCAATAATATATT 57.348 34.615 15.71 2.97 0.00 1.28
3429 3594 7.891183 ACTCACCCTCGAGACTCAATAATATAT 59.109 37.037 15.71 0.00 36.47 0.86
3430 3595 7.232188 ACTCACCCTCGAGACTCAATAATATA 58.768 38.462 15.71 0.00 36.47 0.86
3431 3596 6.071984 ACTCACCCTCGAGACTCAATAATAT 58.928 40.000 15.71 0.00 36.47 1.28
3432 3597 5.446860 ACTCACCCTCGAGACTCAATAATA 58.553 41.667 15.71 0.00 36.47 0.98
3433 3598 4.282496 ACTCACCCTCGAGACTCAATAAT 58.718 43.478 15.71 0.00 36.47 1.28
3434 3599 3.698289 ACTCACCCTCGAGACTCAATAA 58.302 45.455 15.71 0.00 36.47 1.40
3435 3600 3.367646 ACTCACCCTCGAGACTCAATA 57.632 47.619 15.71 0.00 36.47 1.90
3436 3601 2.223803 ACTCACCCTCGAGACTCAAT 57.776 50.000 15.71 0.00 36.47 2.57
3437 3602 2.873094 TACTCACCCTCGAGACTCAA 57.127 50.000 15.71 0.00 36.47 3.02
3438 3603 4.708576 ATATACTCACCCTCGAGACTCA 57.291 45.455 15.71 0.00 36.47 3.41
3439 3604 6.039493 TCAAAATATACTCACCCTCGAGACTC 59.961 42.308 15.71 0.00 36.47 3.36
3440 3605 5.892119 TCAAAATATACTCACCCTCGAGACT 59.108 40.000 15.71 0.00 36.47 3.24
3441 3606 6.145338 TCAAAATATACTCACCCTCGAGAC 57.855 41.667 15.71 0.00 36.47 3.36
3442 3607 5.892119 ACTCAAAATATACTCACCCTCGAGA 59.108 40.000 15.71 0.00 36.47 4.04
3443 3608 6.150396 ACTCAAAATATACTCACCCTCGAG 57.850 41.667 5.13 5.13 39.05 4.04
3444 3609 6.040166 GGTACTCAAAATATACTCACCCTCGA 59.960 42.308 0.00 0.00 0.00 4.04
3445 3610 6.183360 TGGTACTCAAAATATACTCACCCTCG 60.183 42.308 0.00 0.00 0.00 4.63
3446 3611 7.120923 TGGTACTCAAAATATACTCACCCTC 57.879 40.000 0.00 0.00 0.00 4.30
3447 3612 7.504926 TTGGTACTCAAAATATACTCACCCT 57.495 36.000 0.00 0.00 31.46 4.34
3448 3613 8.570068 TTTTGGTACTCAAAATATACTCACCC 57.430 34.615 14.46 0.00 46.73 4.61
3469 3634 5.316987 AGGTGTCTTAGTCCTCCAATTTTG 58.683 41.667 0.00 0.00 0.00 2.44
3470 3635 5.561679 GAGGTGTCTTAGTCCTCCAATTTT 58.438 41.667 0.00 0.00 41.09 1.82
3471 3636 5.167303 GAGGTGTCTTAGTCCTCCAATTT 57.833 43.478 0.00 0.00 41.09 1.82
3472 3637 4.828072 GAGGTGTCTTAGTCCTCCAATT 57.172 45.455 0.00 0.00 41.09 2.32
3477 3642 4.164604 TCTCTAGGAGGTGTCTTAGTCCTC 59.835 50.000 10.42 10.42 44.78 3.71
3478 3643 4.113085 TCTCTAGGAGGTGTCTTAGTCCT 58.887 47.826 0.00 0.00 42.32 3.85
3479 3644 4.506937 TCTCTAGGAGGTGTCTTAGTCC 57.493 50.000 0.00 0.00 34.63 3.85
3480 3645 7.511268 TCTTATCTCTAGGAGGTGTCTTAGTC 58.489 42.308 0.00 0.00 34.63 2.59
3481 3646 7.454553 TCTTATCTCTAGGAGGTGTCTTAGT 57.545 40.000 0.00 0.00 34.63 2.24
3482 3647 7.393234 CCATCTTATCTCTAGGAGGTGTCTTAG 59.607 44.444 0.00 0.00 34.38 2.18
3483 3648 7.073853 TCCATCTTATCTCTAGGAGGTGTCTTA 59.926 40.741 0.00 0.00 0.00 2.10
3484 3649 6.074648 CCATCTTATCTCTAGGAGGTGTCTT 58.925 44.000 0.00 0.00 0.00 3.01
3485 3650 5.374154 TCCATCTTATCTCTAGGAGGTGTCT 59.626 44.000 0.00 0.00 0.00 3.41
3486 3651 5.636123 TCCATCTTATCTCTAGGAGGTGTC 58.364 45.833 0.00 0.00 0.00 3.67
3487 3652 5.671463 TCCATCTTATCTCTAGGAGGTGT 57.329 43.478 0.00 0.00 0.00 4.16
3488 3653 6.325028 TGTTTCCATCTTATCTCTAGGAGGTG 59.675 42.308 0.00 0.00 0.00 4.00
3489 3654 6.444704 TGTTTCCATCTTATCTCTAGGAGGT 58.555 40.000 0.00 0.00 0.00 3.85
3490 3655 6.985653 TGTTTCCATCTTATCTCTAGGAGG 57.014 41.667 0.00 0.00 0.00 4.30
3491 3656 9.844257 AAATTGTTTCCATCTTATCTCTAGGAG 57.156 33.333 0.00 0.00 0.00 3.69
3492 3657 9.838339 GAAATTGTTTCCATCTTATCTCTAGGA 57.162 33.333 0.00 0.00 33.56 2.94
3493 3658 9.844257 AGAAATTGTTTCCATCTTATCTCTAGG 57.156 33.333 0.00 0.00 40.54 3.02
3506 3671 9.919416 TCCATGATTAGATAGAAATTGTTTCCA 57.081 29.630 0.00 0.00 40.54 3.53
3513 3678 9.525826 GGGATTGTCCATGATTAGATAGAAATT 57.474 33.333 0.00 0.00 38.64 1.82
3514 3679 8.898728 AGGGATTGTCCATGATTAGATAGAAAT 58.101 33.333 0.00 0.00 38.64 2.17
3515 3680 8.280258 AGGGATTGTCCATGATTAGATAGAAA 57.720 34.615 0.00 0.00 38.64 2.52
3516 3681 7.878621 AGGGATTGTCCATGATTAGATAGAA 57.121 36.000 0.00 0.00 38.64 2.10
3517 3682 8.816894 GTTAGGGATTGTCCATGATTAGATAGA 58.183 37.037 0.00 0.00 38.64 1.98
3518 3683 8.820831 AGTTAGGGATTGTCCATGATTAGATAG 58.179 37.037 0.00 0.00 38.64 2.08
3519 3684 8.742125 AGTTAGGGATTGTCCATGATTAGATA 57.258 34.615 0.00 0.00 38.64 1.98
3520 3685 7.639062 AGTTAGGGATTGTCCATGATTAGAT 57.361 36.000 0.00 0.00 38.64 1.98
3521 3686 7.016268 GGTAGTTAGGGATTGTCCATGATTAGA 59.984 40.741 0.00 0.00 38.64 2.10
3522 3687 7.162082 GGTAGTTAGGGATTGTCCATGATTAG 58.838 42.308 0.00 0.00 38.64 1.73
3523 3688 6.617784 TGGTAGTTAGGGATTGTCCATGATTA 59.382 38.462 0.00 0.00 38.64 1.75
3524 3689 5.431731 TGGTAGTTAGGGATTGTCCATGATT 59.568 40.000 0.00 0.00 38.64 2.57
3525 3690 4.975147 TGGTAGTTAGGGATTGTCCATGAT 59.025 41.667 0.00 0.00 38.64 2.45
3526 3691 4.367166 TGGTAGTTAGGGATTGTCCATGA 58.633 43.478 0.00 0.00 38.64 3.07
3527 3692 4.771114 TGGTAGTTAGGGATTGTCCATG 57.229 45.455 0.00 0.00 38.64 3.66
3528 3693 5.789574 TTTGGTAGTTAGGGATTGTCCAT 57.210 39.130 0.00 0.00 38.64 3.41
3529 3694 5.789574 ATTTGGTAGTTAGGGATTGTCCA 57.210 39.130 0.00 0.00 38.64 4.02
3530 3695 9.668497 GATATATTTGGTAGTTAGGGATTGTCC 57.332 37.037 0.00 0.00 35.23 4.02
3542 3707 9.047947 GGGGATGTTAGAGATATATTTGGTAGT 57.952 37.037 0.00 0.00 0.00 2.73
3543 3708 8.487028 GGGGGATGTTAGAGATATATTTGGTAG 58.513 40.741 0.00 0.00 0.00 3.18
3544 3709 7.125204 CGGGGGATGTTAGAGATATATTTGGTA 59.875 40.741 0.00 0.00 0.00 3.25
3545 3710 6.070194 CGGGGGATGTTAGAGATATATTTGGT 60.070 42.308 0.00 0.00 0.00 3.67
3546 3711 6.349300 CGGGGGATGTTAGAGATATATTTGG 58.651 44.000 0.00 0.00 0.00 3.28
3547 3712 5.817816 GCGGGGGATGTTAGAGATATATTTG 59.182 44.000 0.00 0.00 0.00 2.32
3548 3713 5.487488 TGCGGGGGATGTTAGAGATATATTT 59.513 40.000 0.00 0.00 0.00 1.40
3549 3714 5.030147 TGCGGGGGATGTTAGAGATATATT 58.970 41.667 0.00 0.00 0.00 1.28
3550 3715 4.620723 TGCGGGGGATGTTAGAGATATAT 58.379 43.478 0.00 0.00 0.00 0.86
3551 3716 4.055710 TGCGGGGGATGTTAGAGATATA 57.944 45.455 0.00 0.00 0.00 0.86
3552 3717 2.902608 TGCGGGGGATGTTAGAGATAT 58.097 47.619 0.00 0.00 0.00 1.63
3553 3718 2.391926 TGCGGGGGATGTTAGAGATA 57.608 50.000 0.00 0.00 0.00 1.98
3554 3719 1.507140 TTGCGGGGGATGTTAGAGAT 58.493 50.000 0.00 0.00 0.00 2.75
3555 3720 1.416401 GATTGCGGGGGATGTTAGAGA 59.584 52.381 0.00 0.00 0.00 3.10
3556 3721 1.873903 CGATTGCGGGGGATGTTAGAG 60.874 57.143 0.00 0.00 0.00 2.43
3557 3722 0.105964 CGATTGCGGGGGATGTTAGA 59.894 55.000 0.00 0.00 0.00 2.10
3558 3723 0.179056 ACGATTGCGGGGGATGTTAG 60.179 55.000 0.00 0.00 43.17 2.34
3559 3724 1.069513 CTACGATTGCGGGGGATGTTA 59.930 52.381 0.00 0.00 43.17 2.41
3560 3725 0.179056 CTACGATTGCGGGGGATGTT 60.179 55.000 0.00 0.00 43.17 2.71
3561 3726 1.046472 TCTACGATTGCGGGGGATGT 61.046 55.000 0.00 0.00 43.17 3.06
3562 3727 0.105964 TTCTACGATTGCGGGGGATG 59.894 55.000 0.00 0.00 43.17 3.51
3563 3728 0.106149 GTTCTACGATTGCGGGGGAT 59.894 55.000 0.00 0.00 43.17 3.85
3564 3729 1.259142 TGTTCTACGATTGCGGGGGA 61.259 55.000 0.00 0.00 43.17 4.81
3565 3730 0.391927 TTGTTCTACGATTGCGGGGG 60.392 55.000 0.00 0.00 43.17 5.40
3566 3731 0.725117 GTTGTTCTACGATTGCGGGG 59.275 55.000 0.00 0.00 43.17 5.73
3567 3732 1.127951 GTGTTGTTCTACGATTGCGGG 59.872 52.381 0.00 0.00 43.17 6.13
3568 3733 1.201769 CGTGTTGTTCTACGATTGCGG 60.202 52.381 0.00 0.00 42.54 5.69
3569 3734 1.717113 TCGTGTTGTTCTACGATTGCG 59.283 47.619 0.00 0.00 43.54 4.85
3570 3735 2.729882 ACTCGTGTTGTTCTACGATTGC 59.270 45.455 0.00 0.00 46.66 3.56
3571 3736 4.293729 CACTCGTGTTGTTCTACGATTG 57.706 45.455 0.00 0.00 46.66 2.67
3572 3737 3.973657 ACACTCGTGTTGTTCTACGATT 58.026 40.909 0.00 0.00 46.66 3.34
3573 3738 3.562505 GACACTCGTGTTGTTCTACGAT 58.437 45.455 3.97 0.00 46.66 3.73
3574 3739 2.600556 CGACACTCGTGTTGTTCTACGA 60.601 50.000 3.97 0.00 45.05 3.43
3575 3740 1.707117 CGACACTCGTGTTGTTCTACG 59.293 52.381 3.97 0.00 45.05 3.51
3576 3741 1.450905 GCGACACTCGTGTTGTTCTAC 59.549 52.381 16.46 0.00 45.05 2.59
3577 3742 1.065851 TGCGACACTCGTGTTGTTCTA 59.934 47.619 16.46 2.01 45.05 2.10
3578 3743 0.179121 TGCGACACTCGTGTTGTTCT 60.179 50.000 16.46 0.00 45.05 3.01
3579 3744 0.229753 CTGCGACACTCGTGTTGTTC 59.770 55.000 16.46 4.32 45.05 3.18
3580 3745 0.179121 TCTGCGACACTCGTGTTGTT 60.179 50.000 16.46 0.00 45.05 2.83
3581 3746 0.870307 GTCTGCGACACTCGTGTTGT 60.870 55.000 16.46 0.00 45.05 3.32
3582 3747 1.846648 GTCTGCGACACTCGTGTTG 59.153 57.895 12.10 12.10 45.05 3.33
3583 3748 1.657487 CGTCTGCGACACTCGTGTT 60.657 57.895 3.97 0.00 45.05 3.32
3585 3750 2.801162 CCGTCTGCGACACTCGTG 60.801 66.667 8.91 0.00 42.81 4.35
3586 3751 1.509644 TAACCGTCTGCGACACTCGT 61.510 55.000 8.91 0.00 42.81 4.18
3587 3752 0.793478 CTAACCGTCTGCGACACTCG 60.793 60.000 8.91 0.00 43.89 4.18
3588 3753 0.520404 TCTAACCGTCTGCGACACTC 59.480 55.000 8.91 0.00 41.33 3.51
3589 3754 0.240411 GTCTAACCGTCTGCGACACT 59.760 55.000 8.91 0.00 41.33 3.55
3590 3755 0.240411 AGTCTAACCGTCTGCGACAC 59.760 55.000 8.91 0.00 41.33 3.67
3591 3756 0.240145 CAGTCTAACCGTCTGCGACA 59.760 55.000 8.91 0.00 41.33 4.35
3592 3757 0.456312 CCAGTCTAACCGTCTGCGAC 60.456 60.000 0.00 0.00 41.33 5.19
3593 3758 0.607217 TCCAGTCTAACCGTCTGCGA 60.607 55.000 0.00 0.00 41.33 5.10
3594 3759 0.242825 TTCCAGTCTAACCGTCTGCG 59.757 55.000 0.00 0.00 37.95 5.18
3595 3760 2.450609 TTTCCAGTCTAACCGTCTGC 57.549 50.000 0.00 0.00 0.00 4.26
3613 3778 2.477880 CCCGTCGGCTGCTATTTTT 58.522 52.632 5.50 0.00 0.00 1.94
3614 3779 4.218722 CCCGTCGGCTGCTATTTT 57.781 55.556 5.50 0.00 0.00 1.82
3624 3789 3.432051 GAGGATGTCAGCCCGTCGG 62.432 68.421 3.60 3.60 0.00 4.79
3625 3790 2.105128 GAGGATGTCAGCCCGTCG 59.895 66.667 2.75 0.00 0.00 5.12
3626 3791 2.501610 GGAGGATGTCAGCCCGTC 59.498 66.667 2.75 0.00 0.00 4.79
3627 3792 3.083997 GGGAGGATGTCAGCCCGT 61.084 66.667 2.75 0.00 0.00 5.28
3628 3793 3.083349 TGGGAGGATGTCAGCCCG 61.083 66.667 2.75 0.00 43.70 6.13
3629 3794 2.262774 CTGTGGGAGGATGTCAGCCC 62.263 65.000 2.75 0.00 41.08 5.19
3630 3795 1.222936 CTGTGGGAGGATGTCAGCC 59.777 63.158 0.00 0.00 0.00 4.85
3631 3796 0.107945 GACTGTGGGAGGATGTCAGC 60.108 60.000 0.00 0.00 0.00 4.26
3632 3797 0.174389 CGACTGTGGGAGGATGTCAG 59.826 60.000 0.00 0.00 0.00 3.51
3633 3798 0.541998 ACGACTGTGGGAGGATGTCA 60.542 55.000 0.00 0.00 0.00 3.58
3634 3799 1.134560 GTACGACTGTGGGAGGATGTC 59.865 57.143 0.00 0.00 0.00 3.06
3635 3800 1.183549 GTACGACTGTGGGAGGATGT 58.816 55.000 0.00 0.00 0.00 3.06
3636 3801 0.460311 GGTACGACTGTGGGAGGATG 59.540 60.000 0.00 0.00 0.00 3.51
3637 3802 0.686769 GGGTACGACTGTGGGAGGAT 60.687 60.000 0.00 0.00 0.00 3.24
3638 3803 1.304713 GGGTACGACTGTGGGAGGA 60.305 63.158 0.00 0.00 0.00 3.71
3639 3804 2.707849 CGGGTACGACTGTGGGAGG 61.708 68.421 0.00 0.00 44.60 4.30
3640 3805 2.707849 CCGGGTACGACTGTGGGAG 61.708 68.421 0.00 0.00 44.60 4.30
3641 3806 2.677524 CCGGGTACGACTGTGGGA 60.678 66.667 0.00 0.00 44.60 4.37
3642 3807 2.677524 TCCGGGTACGACTGTGGG 60.678 66.667 0.00 0.00 44.60 4.61
3643 3808 2.882876 CTCCGGGTACGACTGTGG 59.117 66.667 0.00 0.00 44.60 4.17
3644 3809 1.945354 ATGCTCCGGGTACGACTGTG 61.945 60.000 0.00 0.00 44.60 3.66
3645 3810 1.664321 GATGCTCCGGGTACGACTGT 61.664 60.000 0.00 0.00 44.60 3.55
3646 3811 1.065928 GATGCTCCGGGTACGACTG 59.934 63.158 0.00 0.00 44.60 3.51
3647 3812 2.478890 CGATGCTCCGGGTACGACT 61.479 63.158 0.00 0.00 44.60 4.18
3648 3813 2.025727 CGATGCTCCGGGTACGAC 59.974 66.667 0.00 0.00 44.60 4.34
3649 3814 2.438975 ACGATGCTCCGGGTACGA 60.439 61.111 0.00 0.00 44.60 3.43
3650 3815 2.278596 CACGATGCTCCGGGTACG 60.279 66.667 0.00 3.73 40.55 3.67
3651 3816 2.106332 CCACGATGCTCCGGGTAC 59.894 66.667 0.00 0.00 0.00 3.34
3652 3817 2.043752 TCCACGATGCTCCGGGTA 60.044 61.111 0.00 0.00 0.00 3.69
3653 3818 3.771160 GTCCACGATGCTCCGGGT 61.771 66.667 0.00 0.00 0.00 5.28
3654 3819 4.873129 CGTCCACGATGCTCCGGG 62.873 72.222 0.00 0.00 43.02 5.73
3655 3820 4.873129 CCGTCCACGATGCTCCGG 62.873 72.222 0.00 0.00 43.02 5.14
3656 3821 4.129737 ACCGTCCACGATGCTCCG 62.130 66.667 0.00 0.00 43.02 4.63
3657 3822 2.509336 CACCGTCCACGATGCTCC 60.509 66.667 0.00 0.00 43.02 4.70
3658 3823 1.805945 GACACCGTCCACGATGCTC 60.806 63.158 0.00 0.00 36.00 4.26
3659 3824 2.261671 GACACCGTCCACGATGCT 59.738 61.111 0.00 0.00 36.00 3.79
3660 3825 3.179265 CGACACCGTCCACGATGC 61.179 66.667 0.00 0.00 36.00 3.91
3969 4134 1.759445 AGTATCATGCGCTTCTGGAGT 59.241 47.619 9.73 0.00 0.00 3.85
3970 4135 2.133553 CAGTATCATGCGCTTCTGGAG 58.866 52.381 9.73 0.00 0.00 3.86
3971 4136 1.807755 GCAGTATCATGCGCTTCTGGA 60.808 52.381 9.73 0.00 36.28 3.86
3972 4137 0.585357 GCAGTATCATGCGCTTCTGG 59.415 55.000 9.73 0.00 36.28 3.86
3980 4145 3.056891 GGTCTCTCCTAGCAGTATCATGC 60.057 52.174 0.00 0.00 46.88 4.06
3981 4146 3.509575 GGGTCTCTCCTAGCAGTATCATG 59.490 52.174 0.00 0.00 36.25 3.07
3982 4147 3.141083 TGGGTCTCTCCTAGCAGTATCAT 59.859 47.826 0.00 0.00 36.25 2.45
3983 4148 2.514160 TGGGTCTCTCCTAGCAGTATCA 59.486 50.000 0.00 0.00 36.25 2.15
3984 4149 2.888414 GTGGGTCTCTCCTAGCAGTATC 59.112 54.545 0.00 0.00 36.25 2.24
3985 4150 2.425102 GGTGGGTCTCTCCTAGCAGTAT 60.425 54.545 0.00 0.00 43.28 2.12
3986 4151 1.063867 GGTGGGTCTCTCCTAGCAGTA 60.064 57.143 0.00 0.00 43.28 2.74
3987 4152 0.324830 GGTGGGTCTCTCCTAGCAGT 60.325 60.000 0.00 0.00 43.28 4.40
3988 4153 1.388065 CGGTGGGTCTCTCCTAGCAG 61.388 65.000 0.00 0.00 43.85 4.24
3989 4154 1.379977 CGGTGGGTCTCTCCTAGCA 60.380 63.158 0.00 0.00 43.85 3.49
3990 4155 2.787567 GCGGTGGGTCTCTCCTAGC 61.788 68.421 0.00 0.00 40.94 3.42
3991 4156 0.183014 TAGCGGTGGGTCTCTCCTAG 59.817 60.000 0.00 0.00 36.25 3.02
3992 4157 0.627451 TTAGCGGTGGGTCTCTCCTA 59.373 55.000 0.00 0.00 36.25 2.94
3993 4158 0.032017 ATTAGCGGTGGGTCTCTCCT 60.032 55.000 0.00 0.00 36.25 3.69
3994 4159 0.105039 CATTAGCGGTGGGTCTCTCC 59.895 60.000 0.00 0.00 0.00 3.71
3995 4160 0.824759 ACATTAGCGGTGGGTCTCTC 59.175 55.000 0.00 0.00 0.00 3.20
3996 4161 1.066143 CAACATTAGCGGTGGGTCTCT 60.066 52.381 0.00 0.00 0.00 3.10
3997 4162 1.369625 CAACATTAGCGGTGGGTCTC 58.630 55.000 0.00 0.00 0.00 3.36
3998 4163 0.676782 GCAACATTAGCGGTGGGTCT 60.677 55.000 0.00 0.00 0.00 3.85
3999 4164 0.958382 TGCAACATTAGCGGTGGGTC 60.958 55.000 0.00 0.00 33.85 4.46
4000 4165 0.538516 TTGCAACATTAGCGGTGGGT 60.539 50.000 0.00 0.00 33.85 4.51
4001 4166 0.171007 CTTGCAACATTAGCGGTGGG 59.829 55.000 0.00 0.00 33.85 4.61
4002 4167 3.700577 CTTGCAACATTAGCGGTGG 57.299 52.632 0.00 0.00 33.85 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.