Multiple sequence alignment - TraesCS4D01G018800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G018800 chr4D 100.000 3728 0 0 1 3728 8009719 8013446 0.000000e+00 6885.0
1 TraesCS4D01G018800 chr4D 97.391 920 23 1 1 919 119808544 119807625 0.000000e+00 1565.0
2 TraesCS4D01G018800 chr4D 96.308 921 29 3 1 919 181135087 181136004 0.000000e+00 1507.0
3 TraesCS4D01G018800 chr4D 89.024 1230 67 25 918 2105 8137536 8136333 0.000000e+00 1461.0
4 TraesCS4D01G018800 chr4D 85.390 616 61 18 3112 3722 28834832 28835423 2.460000e-171 612.0
5 TraesCS4D01G018800 chr4D 96.154 104 4 0 1497 1600 8150932 8150829 1.780000e-38 171.0
6 TraesCS4D01G018800 chr4D 96.117 103 4 0 1497 1599 7992943 7993045 6.400000e-38 169.0
7 TraesCS4D01G018800 chr4D 81.757 148 19 4 2470 2610 8136001 8135855 2.350000e-22 117.0
8 TraesCS4D01G018800 chr4D 85.366 82 10 2 208 289 119808176 119808097 2.390000e-12 84.2
9 TraesCS4D01G018800 chr4D 90.476 63 5 1 3072 3134 502071472 502071533 8.580000e-12 82.4
10 TraesCS4D01G018800 chr4A 92.398 1197 62 16 918 2095 595284135 595282949 0.000000e+00 1679.0
11 TraesCS4D01G018800 chr4A 84.553 246 20 8 2407 2648 595282472 595282241 1.040000e-55 228.0
12 TraesCS4D01G018800 chr4A 93.333 60 3 1 3072 3131 79936512 79936454 1.840000e-13 87.9
13 TraesCS4D01G018800 chr3D 97.828 921 19 1 1 920 80566455 80565535 0.000000e+00 1589.0
14 TraesCS4D01G018800 chr3D 81.156 398 44 18 1527 1917 598295250 598295623 1.310000e-74 291.0
15 TraesCS4D01G018800 chr3D 85.366 82 10 2 208 289 80566087 80566008 2.390000e-12 84.2
16 TraesCS4D01G018800 chr2D 97.283 920 24 1 1 919 423302694 423303613 0.000000e+00 1559.0
17 TraesCS4D01G018800 chr2D 96.630 920 30 1 1 919 103071471 103072390 0.000000e+00 1526.0
18 TraesCS4D01G018800 chr2D 94.348 920 21 3 1 919 550643913 550644802 0.000000e+00 1382.0
19 TraesCS4D01G018800 chr2D 86.466 532 45 12 3207 3722 580976746 580976226 3.250000e-155 558.0
20 TraesCS4D01G018800 chr2D 85.548 429 49 9 3302 3722 586906187 586906610 1.590000e-118 436.0
21 TraesCS4D01G018800 chr2D 92.063 63 4 1 3071 3133 489669149 489669088 1.840000e-13 87.9
22 TraesCS4D01G018800 chr2D 85.366 82 10 2 368 447 103071679 103071760 2.390000e-12 84.2
23 TraesCS4D01G018800 chr1D 95.238 861 33 3 61 920 394955556 394954703 0.000000e+00 1356.0
24 TraesCS4D01G018800 chr1D 84.627 657 67 20 3070 3719 454645897 454646526 1.140000e-174 623.0
25 TraesCS4D01G018800 chr1D 85.388 438 51 9 3296 3728 408411076 408410647 3.420000e-120 442.0
26 TraesCS4D01G018800 chr1D 86.173 405 43 7 3113 3517 441562840 441563231 3.440000e-115 425.0
27 TraesCS4D01G018800 chr1D 96.296 54 2 0 3070 3123 376773680 376773627 5.130000e-14 89.8
28 TraesCS4D01G018800 chr1D 82.653 98 14 3 353 447 394955424 394955327 2.390000e-12 84.2
29 TraesCS4D01G018800 chr4B 85.188 1276 87 39 935 2156 14654010 14652783 0.000000e+00 1216.0
30 TraesCS4D01G018800 chr4B 85.219 433 55 5 3302 3728 640437751 640438180 1.590000e-118 436.0
31 TraesCS4D01G018800 chr4B 80.753 478 56 18 3070 3546 12244738 12244296 1.280000e-89 340.0
32 TraesCS4D01G018800 chr4B 80.994 342 30 19 2419 2744 14652550 14652228 4.810000e-59 239.0
33 TraesCS4D01G018800 chr3B 84.465 663 75 18 3069 3720 4295634 4296279 2.440000e-176 628.0
34 TraesCS4D01G018800 chr3B 84.084 622 86 8 3113 3726 418883661 418884277 4.150000e-164 588.0
35 TraesCS4D01G018800 chr3A 85.481 613 62 9 3133 3722 72477367 72476759 6.840000e-172 614.0
36 TraesCS4D01G018800 chr3A 93.976 83 5 0 2959 3041 617441335 617441253 3.910000e-25 126.0
37 TraesCS4D01G018800 chr3A 93.827 81 5 0 2959 3039 710885440 710885360 5.060000e-24 122.0
38 TraesCS4D01G018800 chr5B 86.907 443 50 5 3281 3717 293460101 293460541 1.200000e-134 490.0
39 TraesCS4D01G018800 chr5B 85.714 287 28 7 1920 2204 25318280 25318555 1.310000e-74 291.0
40 TraesCS4D01G018800 chr5B 84.815 270 34 6 3456 3721 694275671 694275937 7.940000e-67 265.0
41 TraesCS4D01G018800 chr7A 81.672 622 67 22 3134 3720 36364885 36364276 1.210000e-129 473.0
42 TraesCS4D01G018800 chr7A 77.961 608 85 18 3112 3684 404012024 404011431 5.970000e-88 335.0
43 TraesCS4D01G018800 chr7A 75.332 377 48 23 1551 1923 255900716 255901051 5.020000e-29 139.0
44 TraesCS4D01G018800 chr7A 82.500 120 10 6 2301 2420 483809436 483809328 1.100000e-15 95.3
45 TraesCS4D01G018800 chr6D 85.106 376 46 7 3116 3490 125235146 125235512 3.520000e-100 375.0
46 TraesCS4D01G018800 chr5D 85.843 332 38 5 3191 3522 233722043 233721721 9.910000e-91 344.0
47 TraesCS4D01G018800 chr5D 80.645 403 43 20 1527 1923 35832277 35831904 2.840000e-71 279.0
48 TraesCS4D01G018800 chr6B 80.653 398 46 20 1527 1917 698020660 698021033 2.840000e-71 279.0
49 TraesCS4D01G018800 chr1B 80.402 398 47 19 1527 1917 31008217 31008590 1.320000e-69 274.0
50 TraesCS4D01G018800 chr1B 89.552 67 6 1 3067 3133 628509122 628509187 2.390000e-12 84.2
51 TraesCS4D01G018800 chr1B 84.416 77 10 2 2788 2862 70499499 70499575 1.440000e-09 75.0
52 TraesCS4D01G018800 chr2B 82.727 220 34 4 3070 3289 714022212 714021997 3.800000e-45 193.0
53 TraesCS4D01G018800 chrUn 84.737 190 28 1 1908 2096 67333136 67333325 4.920000e-44 189.0
54 TraesCS4D01G018800 chr6A 93.827 81 5 0 2960 3040 558176630 558176710 5.060000e-24 122.0
55 TraesCS4D01G018800 chr6A 92.683 82 6 0 2959 3040 599171985 599171904 6.540000e-23 119.0
56 TraesCS4D01G018800 chr2A 92.771 83 6 0 2959 3041 719688729 719688811 1.820000e-23 121.0
57 TraesCS4D01G018800 chr2A 92.105 76 5 1 3070 3145 213411865 213411791 5.090000e-19 106.0
58 TraesCS4D01G018800 chr2A 81.667 120 11 6 2301 2420 776934946 776934838 5.130000e-14 89.8
59 TraesCS4D01G018800 chr1A 89.744 78 8 0 2963 3040 17278728 17278651 2.370000e-17 100.0
60 TraesCS4D01G018800 chr1A 80.833 120 11 7 2301 2420 297881461 297881568 2.390000e-12 84.2
61 TraesCS4D01G018800 chr1A 78.261 92 18 2 2777 2866 554368288 554368379 1.450000e-04 58.4
62 TraesCS4D01G018800 chr7B 96.875 32 1 0 2835 2866 337935434 337935465 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G018800 chr4D 8009719 8013446 3727 False 6885.0 6885 100.0000 1 3728 1 chr4D.!!$F2 3727
1 TraesCS4D01G018800 chr4D 181135087 181136004 917 False 1507.0 1507 96.3080 1 919 1 chr4D.!!$F4 918
2 TraesCS4D01G018800 chr4D 119807625 119808544 919 True 824.6 1565 91.3785 1 919 2 chr4D.!!$R3 918
3 TraesCS4D01G018800 chr4D 8135855 8137536 1681 True 789.0 1461 85.3905 918 2610 2 chr4D.!!$R2 1692
4 TraesCS4D01G018800 chr4D 28834832 28835423 591 False 612.0 612 85.3900 3112 3722 1 chr4D.!!$F3 610
5 TraesCS4D01G018800 chr4A 595282241 595284135 1894 True 953.5 1679 88.4755 918 2648 2 chr4A.!!$R2 1730
6 TraesCS4D01G018800 chr3D 80565535 80566455 920 True 836.6 1589 91.5970 1 920 2 chr3D.!!$R1 919
7 TraesCS4D01G018800 chr2D 423302694 423303613 919 False 1559.0 1559 97.2830 1 919 1 chr2D.!!$F1 918
8 TraesCS4D01G018800 chr2D 550643913 550644802 889 False 1382.0 1382 94.3480 1 919 1 chr2D.!!$F2 918
9 TraesCS4D01G018800 chr2D 103071471 103072390 919 False 805.1 1526 90.9980 1 919 2 chr2D.!!$F4 918
10 TraesCS4D01G018800 chr2D 580976226 580976746 520 True 558.0 558 86.4660 3207 3722 1 chr2D.!!$R2 515
11 TraesCS4D01G018800 chr1D 394954703 394955556 853 True 720.1 1356 88.9455 61 920 2 chr1D.!!$R3 859
12 TraesCS4D01G018800 chr1D 454645897 454646526 629 False 623.0 623 84.6270 3070 3719 1 chr1D.!!$F2 649
13 TraesCS4D01G018800 chr4B 14652228 14654010 1782 True 727.5 1216 83.0910 935 2744 2 chr4B.!!$R2 1809
14 TraesCS4D01G018800 chr3B 4295634 4296279 645 False 628.0 628 84.4650 3069 3720 1 chr3B.!!$F1 651
15 TraesCS4D01G018800 chr3B 418883661 418884277 616 False 588.0 588 84.0840 3113 3726 1 chr3B.!!$F2 613
16 TraesCS4D01G018800 chr3A 72476759 72477367 608 True 614.0 614 85.4810 3133 3722 1 chr3A.!!$R1 589
17 TraesCS4D01G018800 chr7A 36364276 36364885 609 True 473.0 473 81.6720 3134 3720 1 chr7A.!!$R1 586
18 TraesCS4D01G018800 chr7A 404011431 404012024 593 True 335.0 335 77.9610 3112 3684 1 chr7A.!!$R2 572

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
824 856 0.098200 CGACTCACGCGTGGATAAGA 59.902 55.0 36.41 17.08 34.51 2.10 F
1934 2057 0.109532 AGATCGAGGCGAGGATCTCA 59.890 55.0 10.76 0.00 44.55 3.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2468 2922 0.250513 GAAGCCTTCGTCCACCTGAT 59.749 55.0 0.0 0.0 0.0 2.90 R
2953 3446 0.030705 TTCATCCCTCCTCCTCCCAG 60.031 60.0 0.0 0.0 0.0 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
157 159 2.203070 GGTCGCCGATGCTGGAAT 60.203 61.111 0.00 0.00 34.43 3.01
352 354 7.309194 GGAACCATACAGTAGAAAAGTTGCATT 60.309 37.037 0.00 0.00 0.00 3.56
786 818 3.525609 AGTCAGAGGTAGGAGATGACAGA 59.474 47.826 6.43 0.00 42.11 3.41
824 856 0.098200 CGACTCACGCGTGGATAAGA 59.902 55.000 36.41 17.08 34.51 2.10
836 868 4.213482 GCGTGGATAAGACTGAAAACTGTT 59.787 41.667 0.00 0.00 0.00 3.16
861 893 3.338249 CATGAAAACGTCCAGGAGACAT 58.662 45.455 0.00 0.00 46.69 3.06
928 960 1.626654 CGGCCGGCATAAATAGAGCG 61.627 60.000 30.85 14.57 0.00 5.03
958 990 5.185249 AGCTCTGCATTTTCATGTGATTTCT 59.815 36.000 0.00 0.00 32.28 2.52
1209 1254 0.750911 ACCGTCTCCTATCCACCGAC 60.751 60.000 0.00 0.00 0.00 4.79
1348 1423 2.111999 CTGGAACTTCACCTCGGCCA 62.112 60.000 2.24 0.00 0.00 5.36
1557 1632 1.515954 GGAGAAGATCAACCGGCGA 59.484 57.895 9.30 0.00 0.00 5.54
1636 1729 5.953183 TCTTGCACATTCATATCCAACAAC 58.047 37.500 0.00 0.00 0.00 3.32
1637 1730 5.476254 TCTTGCACATTCATATCCAACAACA 59.524 36.000 0.00 0.00 0.00 3.33
1638 1731 5.718724 TGCACATTCATATCCAACAACAA 57.281 34.783 0.00 0.00 0.00 2.83
1759 1864 4.070552 GCTCGAGGACCGCAACCT 62.071 66.667 15.58 0.00 40.80 3.50
1862 1970 3.991051 CGGTCACCGTCTGCAGGT 61.991 66.667 15.13 1.21 42.73 4.00
1865 1973 3.311110 TCACCGTCTGCAGGTCCC 61.311 66.667 15.13 0.00 40.59 4.46
1934 2057 0.109532 AGATCGAGGCGAGGATCTCA 59.890 55.000 10.76 0.00 44.55 3.27
1986 2109 3.253838 ACGGCAAGGGGGTGCTTA 61.254 61.111 0.00 0.00 44.31 3.09
2053 2176 2.359354 CAATGCCGTCCCGTTCCA 60.359 61.111 0.00 0.00 0.00 3.53
2130 2253 7.725397 TGATTAATTTACTCCCAATATGCTGCT 59.275 33.333 0.00 0.00 0.00 4.24
2138 2261 5.163163 ACTCCCAATATGCTGCTCATTCTTA 60.163 40.000 0.00 0.00 36.63 2.10
2141 2264 7.460910 TCCCAATATGCTGCTCATTCTTATTA 58.539 34.615 0.00 0.00 36.63 0.98
2144 2267 8.235226 CCAATATGCTGCTCATTCTTATTACAG 58.765 37.037 0.00 0.00 36.63 2.74
2150 2273 8.615211 TGCTGCTCATTCTTATTACAGTTTATG 58.385 33.333 0.00 0.00 0.00 1.90
2151 2274 8.616076 GCTGCTCATTCTTATTACAGTTTATGT 58.384 33.333 0.00 0.00 46.45 2.29
2168 2291 8.443937 CAGTTTATGTACAAGCTTAAAGAGGAC 58.556 37.037 0.00 0.00 0.00 3.85
2173 2296 7.817418 TGTACAAGCTTAAAGAGGACATTTT 57.183 32.000 0.00 0.00 0.00 1.82
2175 2298 5.532557 ACAAGCTTAAAGAGGACATTTTGC 58.467 37.500 0.00 0.00 0.00 3.68
2184 2311 1.884579 AGGACATTTTGCTCTGCTGTG 59.115 47.619 0.00 0.00 0.00 3.66
2185 2312 1.881973 GGACATTTTGCTCTGCTGTGA 59.118 47.619 0.00 0.00 0.00 3.58
2186 2313 2.351157 GGACATTTTGCTCTGCTGTGAC 60.351 50.000 0.00 0.00 0.00 3.67
2187 2314 2.291465 GACATTTTGCTCTGCTGTGACA 59.709 45.455 0.00 0.00 0.00 3.58
2188 2315 2.889045 ACATTTTGCTCTGCTGTGACAT 59.111 40.909 0.00 0.00 0.00 3.06
2189 2316 3.057736 ACATTTTGCTCTGCTGTGACATC 60.058 43.478 0.00 0.00 0.00 3.06
2190 2317 2.556144 TTTGCTCTGCTGTGACATCT 57.444 45.000 0.00 0.00 0.00 2.90
2191 2318 2.556144 TTGCTCTGCTGTGACATCTT 57.444 45.000 0.00 0.00 0.00 2.40
2192 2319 3.683365 TTGCTCTGCTGTGACATCTTA 57.317 42.857 0.00 0.00 0.00 2.10
2193 2320 3.900966 TGCTCTGCTGTGACATCTTAT 57.099 42.857 0.00 0.00 0.00 1.73
2194 2321 3.528532 TGCTCTGCTGTGACATCTTATG 58.471 45.455 0.00 0.00 0.00 1.90
2195 2322 2.871022 GCTCTGCTGTGACATCTTATGG 59.129 50.000 0.00 0.00 33.60 2.74
2196 2323 2.871022 CTCTGCTGTGACATCTTATGGC 59.129 50.000 0.00 0.00 39.32 4.40
2214 2341 1.792949 GGCTACGGCTTCGATTACATG 59.207 52.381 0.00 0.00 38.73 3.21
2215 2342 1.192534 GCTACGGCTTCGATTACATGC 59.807 52.381 0.00 0.00 37.63 4.06
2216 2343 2.469826 CTACGGCTTCGATTACATGCA 58.530 47.619 0.00 0.00 37.63 3.96
2226 2353 3.555547 TCGATTACATGCATCTTTGGACG 59.444 43.478 0.00 0.00 0.00 4.79
2261 2398 6.978338 TGTTTTACACACACAAAAAGTACCA 58.022 32.000 0.00 0.00 0.00 3.25
2262 2399 7.085116 TGTTTTACACACACAAAAAGTACCAG 58.915 34.615 0.00 0.00 0.00 4.00
2263 2400 3.775661 ACACACACAAAAAGTACCAGC 57.224 42.857 0.00 0.00 0.00 4.85
2264 2401 3.085533 ACACACACAAAAAGTACCAGCA 58.914 40.909 0.00 0.00 0.00 4.41
2333 2782 6.770785 AGAAGCAAAGTGTGTTTATCCTTACA 59.229 34.615 0.00 0.00 29.63 2.41
2334 2783 7.448469 AGAAGCAAAGTGTGTTTATCCTTACAT 59.552 33.333 0.00 0.00 29.63 2.29
2335 2784 7.524717 AGCAAAGTGTGTTTATCCTTACATT 57.475 32.000 0.00 0.00 0.00 2.71
2392 2843 2.539547 GCACGTGTCATGCATATTCACC 60.540 50.000 18.38 0.00 42.88 4.02
2402 2853 3.982475 TGCATATTCACCTGTCGAGATC 58.018 45.455 0.00 0.00 0.00 2.75
2403 2854 2.983136 GCATATTCACCTGTCGAGATCG 59.017 50.000 0.00 0.00 41.45 3.69
2404 2855 3.551046 GCATATTCACCTGTCGAGATCGT 60.551 47.826 1.70 0.00 40.80 3.73
2405 2856 2.853731 ATTCACCTGTCGAGATCGTC 57.146 50.000 1.70 0.00 40.80 4.20
2417 2868 3.252458 TCGAGATCGTCAACTGAACTGAA 59.748 43.478 1.70 0.00 40.80 3.02
2468 2922 6.645306 TGGATGGAACGACATTGTTATCTTA 58.355 36.000 0.00 0.00 30.75 2.10
2481 2935 5.925506 TGTTATCTTATCAGGTGGACGAA 57.074 39.130 0.00 0.00 0.00 3.85
2514 2968 2.046285 GGCGGAGGACATTGTTGGG 61.046 63.158 0.00 0.00 0.00 4.12
2516 2970 1.026718 GCGGAGGACATTGTTGGGAG 61.027 60.000 0.00 0.00 0.00 4.30
2563 3021 1.053424 GTCATAGGGCCGGGATAACA 58.947 55.000 2.18 0.00 0.00 2.41
2566 3024 3.262405 GTCATAGGGCCGGGATAACAATA 59.738 47.826 2.18 0.00 0.00 1.90
2593 3055 4.440802 CGGTAGAGATCAAGGTTCAAGGAG 60.441 50.000 0.00 0.00 0.00 3.69
2631 3097 2.126307 CTGGCAGAGTGTCCGTCG 60.126 66.667 9.42 0.00 0.00 5.12
2648 3114 1.989165 GTCGCGGCAAATTTTATGCAA 59.011 42.857 5.47 0.00 45.60 4.08
2650 3116 3.061965 GTCGCGGCAAATTTTATGCAAAT 59.938 39.130 5.47 0.00 45.60 2.32
2652 3118 4.864806 TCGCGGCAAATTTTATGCAAATAA 59.135 33.333 6.13 0.00 45.60 1.40
2654 3120 6.036517 TCGCGGCAAATTTTATGCAAATAAAT 59.963 30.769 6.13 0.00 45.60 1.40
2695 3188 0.734889 GATTCAACAGTGCATCGGGG 59.265 55.000 0.00 0.00 0.00 5.73
2706 3199 4.037923 CAGTGCATCGGGGCTTAAAATAAT 59.962 41.667 0.00 0.00 34.04 1.28
2707 3200 4.649218 AGTGCATCGGGGCTTAAAATAATT 59.351 37.500 0.00 0.00 34.04 1.40
2708 3201 5.830991 AGTGCATCGGGGCTTAAAATAATTA 59.169 36.000 0.00 0.00 34.04 1.40
2709 3202 5.918576 GTGCATCGGGGCTTAAAATAATTAC 59.081 40.000 0.00 0.00 34.04 1.89
2710 3203 5.830991 TGCATCGGGGCTTAAAATAATTACT 59.169 36.000 0.00 0.00 34.04 2.24
2711 3204 6.149633 GCATCGGGGCTTAAAATAATTACTG 58.850 40.000 0.00 0.00 0.00 2.74
2714 3207 5.830991 TCGGGGCTTAAAATAATTACTGCAT 59.169 36.000 0.00 0.00 0.00 3.96
2720 3213 9.801873 GGCTTAAAATAATTACTGCATCTTTCA 57.198 29.630 0.00 0.00 0.00 2.69
2736 3229 6.634436 GCATCTTTCAAGACAAAACTACACTG 59.366 38.462 0.00 0.00 37.98 3.66
2744 3237 5.416947 AGACAAAACTACACTGTCGTTCTT 58.583 37.500 0.00 0.00 43.41 2.52
2745 3238 5.291128 AGACAAAACTACACTGTCGTTCTTG 59.709 40.000 13.66 13.66 43.41 3.02
2746 3239 4.201783 ACAAAACTACACTGTCGTTCTTGC 60.202 41.667 14.43 0.00 0.00 4.01
2747 3240 2.882927 ACTACACTGTCGTTCTTGCA 57.117 45.000 0.00 0.00 0.00 4.08
2748 3241 2.470821 ACTACACTGTCGTTCTTGCAC 58.529 47.619 0.00 0.00 0.00 4.57
2749 3242 2.159156 ACTACACTGTCGTTCTTGCACA 60.159 45.455 0.00 0.00 0.00 4.57
2750 3243 1.006832 ACACTGTCGTTCTTGCACAC 58.993 50.000 0.00 0.00 0.00 3.82
2751 3244 1.006086 CACTGTCGTTCTTGCACACA 58.994 50.000 0.00 0.00 0.00 3.72
2752 3245 1.006832 ACTGTCGTTCTTGCACACAC 58.993 50.000 0.00 0.00 0.00 3.82
2753 3246 1.006086 CTGTCGTTCTTGCACACACA 58.994 50.000 0.00 0.00 0.00 3.72
2754 3247 1.396648 CTGTCGTTCTTGCACACACAA 59.603 47.619 0.00 0.00 0.00 3.33
2755 3248 1.807142 TGTCGTTCTTGCACACACAAA 59.193 42.857 0.00 0.00 0.00 2.83
2756 3249 2.226674 TGTCGTTCTTGCACACACAAAA 59.773 40.909 0.00 0.00 0.00 2.44
2757 3250 3.238441 GTCGTTCTTGCACACACAAAAA 58.762 40.909 0.00 0.00 0.00 1.94
2786 3279 5.527511 CACTTTCTGTGCTACTTCATCAG 57.472 43.478 0.00 0.00 40.06 2.90
2787 3280 4.993584 CACTTTCTGTGCTACTTCATCAGT 59.006 41.667 0.00 0.00 40.06 3.41
2788 3281 5.119898 CACTTTCTGTGCTACTTCATCAGTC 59.880 44.000 0.00 0.00 40.06 3.51
2789 3282 5.011533 ACTTTCTGTGCTACTTCATCAGTCT 59.988 40.000 0.00 0.00 36.88 3.24
2790 3283 4.710423 TCTGTGCTACTTCATCAGTCTC 57.290 45.455 0.00 0.00 36.88 3.36
2791 3284 4.082125 TCTGTGCTACTTCATCAGTCTCA 58.918 43.478 0.00 0.00 36.88 3.27
2792 3285 4.708909 TCTGTGCTACTTCATCAGTCTCAT 59.291 41.667 0.00 0.00 36.88 2.90
2793 3286 5.888161 TCTGTGCTACTTCATCAGTCTCATA 59.112 40.000 0.00 0.00 36.88 2.15
2794 3287 6.378280 TCTGTGCTACTTCATCAGTCTCATAA 59.622 38.462 0.00 0.00 36.88 1.90
2795 3288 7.069208 TCTGTGCTACTTCATCAGTCTCATAAT 59.931 37.037 0.00 0.00 36.88 1.28
2796 3289 8.237811 TGTGCTACTTCATCAGTCTCATAATA 57.762 34.615 0.00 0.00 36.88 0.98
2797 3290 8.695456 TGTGCTACTTCATCAGTCTCATAATAA 58.305 33.333 0.00 0.00 36.88 1.40
2798 3291 9.534565 GTGCTACTTCATCAGTCTCATAATAAA 57.465 33.333 0.00 0.00 36.88 1.40
2834 3327 7.674471 AAACTATGTTAGCTTGAGAAAGTCC 57.326 36.000 0.00 0.00 0.00 3.85
2835 3328 6.613153 ACTATGTTAGCTTGAGAAAGTCCT 57.387 37.500 0.00 0.00 0.00 3.85
2836 3329 7.010339 ACTATGTTAGCTTGAGAAAGTCCTT 57.990 36.000 0.00 0.00 0.00 3.36
2837 3330 6.876257 ACTATGTTAGCTTGAGAAAGTCCTTG 59.124 38.462 0.00 0.00 0.00 3.61
2838 3331 5.036117 TGTTAGCTTGAGAAAGTCCTTGT 57.964 39.130 0.00 0.00 0.00 3.16
2839 3332 6.169557 TGTTAGCTTGAGAAAGTCCTTGTA 57.830 37.500 0.00 0.00 0.00 2.41
2840 3333 6.769512 TGTTAGCTTGAGAAAGTCCTTGTAT 58.230 36.000 0.00 0.00 0.00 2.29
2841 3334 7.224297 TGTTAGCTTGAGAAAGTCCTTGTATT 58.776 34.615 0.00 0.00 0.00 1.89
2842 3335 7.173218 TGTTAGCTTGAGAAAGTCCTTGTATTG 59.827 37.037 0.00 0.00 0.00 1.90
2843 3336 5.625150 AGCTTGAGAAAGTCCTTGTATTGT 58.375 37.500 0.00 0.00 0.00 2.71
2844 3337 5.471456 AGCTTGAGAAAGTCCTTGTATTGTG 59.529 40.000 0.00 0.00 0.00 3.33
2845 3338 5.335191 GCTTGAGAAAGTCCTTGTATTGTGG 60.335 44.000 0.00 0.00 0.00 4.17
2846 3339 4.651778 TGAGAAAGTCCTTGTATTGTGGG 58.348 43.478 0.00 0.00 0.00 4.61
2847 3340 4.349636 TGAGAAAGTCCTTGTATTGTGGGA 59.650 41.667 0.00 0.00 0.00 4.37
2848 3341 4.652822 AGAAAGTCCTTGTATTGTGGGAC 58.347 43.478 0.00 0.00 45.98 4.46
2850 3343 1.734163 GTCCTTGTATTGTGGGACGG 58.266 55.000 0.00 0.00 38.77 4.79
2851 3344 1.276989 GTCCTTGTATTGTGGGACGGA 59.723 52.381 0.00 0.00 38.77 4.69
2852 3345 1.553248 TCCTTGTATTGTGGGACGGAG 59.447 52.381 0.00 0.00 0.00 4.63
2853 3346 1.406887 CCTTGTATTGTGGGACGGAGG 60.407 57.143 0.00 0.00 0.00 4.30
2854 3347 0.616371 TTGTATTGTGGGACGGAGGG 59.384 55.000 0.00 0.00 0.00 4.30
2855 3348 0.252330 TGTATTGTGGGACGGAGGGA 60.252 55.000 0.00 0.00 0.00 4.20
2856 3349 0.464452 GTATTGTGGGACGGAGGGAG 59.536 60.000 0.00 0.00 0.00 4.30
2857 3350 0.042131 TATTGTGGGACGGAGGGAGT 59.958 55.000 0.00 0.00 0.00 3.85
2858 3351 0.042131 ATTGTGGGACGGAGGGAGTA 59.958 55.000 0.00 0.00 0.00 2.59
2859 3352 0.613853 TTGTGGGACGGAGGGAGTAG 60.614 60.000 0.00 0.00 0.00 2.57
2860 3353 1.000107 GTGGGACGGAGGGAGTAGT 60.000 63.158 0.00 0.00 0.00 2.73
2861 3354 0.614134 GTGGGACGGAGGGAGTAGTT 60.614 60.000 0.00 0.00 0.00 2.24
2862 3355 0.115745 TGGGACGGAGGGAGTAGTTT 59.884 55.000 0.00 0.00 0.00 2.66
2863 3356 1.273759 GGGACGGAGGGAGTAGTTTT 58.726 55.000 0.00 0.00 0.00 2.43
2864 3357 1.627329 GGGACGGAGGGAGTAGTTTTT 59.373 52.381 0.00 0.00 0.00 1.94
2879 3372 1.953017 TTTTTGATGCACCGGACCG 59.047 52.632 9.46 6.99 0.00 4.79
2890 3383 2.438614 CGGACCGGAGCAGAGAGA 60.439 66.667 9.46 0.00 0.00 3.10
2891 3384 1.826054 CGGACCGGAGCAGAGAGAT 60.826 63.158 9.46 0.00 0.00 2.75
2892 3385 1.739049 GGACCGGAGCAGAGAGATG 59.261 63.158 9.46 0.00 0.00 2.90
2893 3386 1.067250 GACCGGAGCAGAGAGATGC 59.933 63.158 9.46 0.00 46.88 3.91
2904 3397 5.903764 GCAGAGAGATGCTACATTTACAG 57.096 43.478 0.00 0.00 43.07 2.74
2905 3398 4.749099 GCAGAGAGATGCTACATTTACAGG 59.251 45.833 0.00 0.00 43.07 4.00
2906 3399 4.749099 CAGAGAGATGCTACATTTACAGGC 59.251 45.833 0.00 0.00 0.00 4.85
2907 3400 4.406972 AGAGAGATGCTACATTTACAGGCA 59.593 41.667 0.00 0.00 37.32 4.75
2908 3401 5.102953 AGAGATGCTACATTTACAGGCAA 57.897 39.130 0.00 0.00 36.49 4.52
2909 3402 4.878397 AGAGATGCTACATTTACAGGCAAC 59.122 41.667 0.00 0.00 36.49 4.17
2928 3421 7.637709 GGCAACTTTCGATGAATTTAAACTT 57.362 32.000 0.00 0.00 0.00 2.66
2929 3422 7.501515 GGCAACTTTCGATGAATTTAAACTTG 58.498 34.615 0.00 0.00 0.00 3.16
2930 3423 7.003648 GCAACTTTCGATGAATTTAAACTTGC 58.996 34.615 0.00 0.00 0.00 4.01
2931 3424 7.306515 GCAACTTTCGATGAATTTAAACTTGCA 60.307 33.333 0.00 0.00 34.06 4.08
2932 3425 7.858052 ACTTTCGATGAATTTAAACTTGCAG 57.142 32.000 0.00 0.00 0.00 4.41
2933 3426 6.863126 ACTTTCGATGAATTTAAACTTGCAGG 59.137 34.615 0.00 0.00 0.00 4.85
2934 3427 4.732784 TCGATGAATTTAAACTTGCAGGC 58.267 39.130 0.00 0.00 0.00 4.85
2935 3428 4.458989 TCGATGAATTTAAACTTGCAGGCT 59.541 37.500 0.00 0.00 0.00 4.58
2936 3429 5.048083 TCGATGAATTTAAACTTGCAGGCTT 60.048 36.000 0.00 0.00 0.00 4.35
2937 3430 6.150307 TCGATGAATTTAAACTTGCAGGCTTA 59.850 34.615 0.00 0.00 0.00 3.09
2938 3431 6.806249 CGATGAATTTAAACTTGCAGGCTTAA 59.194 34.615 0.69 0.69 0.00 1.85
2939 3432 7.328249 CGATGAATTTAAACTTGCAGGCTTAAA 59.672 33.333 16.47 16.47 0.00 1.52
2940 3433 9.154847 GATGAATTTAAACTTGCAGGCTTAAAT 57.845 29.630 18.83 18.83 36.16 1.40
2941 3434 8.309163 TGAATTTAAACTTGCAGGCTTAAATG 57.691 30.769 22.87 0.00 35.30 2.32
2942 3435 7.387397 TGAATTTAAACTTGCAGGCTTAAATGG 59.613 33.333 22.87 0.00 35.30 3.16
2943 3436 6.412362 TTTAAACTTGCAGGCTTAAATGGA 57.588 33.333 11.75 0.00 0.00 3.41
2944 3437 4.953940 AAACTTGCAGGCTTAAATGGAA 57.046 36.364 0.00 0.00 0.00 3.53
2945 3438 5.488262 AAACTTGCAGGCTTAAATGGAAT 57.512 34.783 0.00 0.00 0.00 3.01
2946 3439 4.725790 ACTTGCAGGCTTAAATGGAATC 57.274 40.909 0.00 0.00 0.00 2.52
2947 3440 4.088634 ACTTGCAGGCTTAAATGGAATCA 58.911 39.130 0.00 0.00 0.00 2.57
2948 3441 4.713321 ACTTGCAGGCTTAAATGGAATCAT 59.287 37.500 0.00 0.00 34.56 2.45
2949 3442 5.188359 ACTTGCAGGCTTAAATGGAATCATT 59.812 36.000 0.00 0.00 44.77 2.57
2950 3443 6.380846 ACTTGCAGGCTTAAATGGAATCATTA 59.619 34.615 0.00 0.00 42.29 1.90
2951 3444 6.395426 TGCAGGCTTAAATGGAATCATTAG 57.605 37.500 0.00 0.00 42.29 1.73
2952 3445 6.128486 TGCAGGCTTAAATGGAATCATTAGA 58.872 36.000 0.00 0.00 42.29 2.10
2953 3446 6.039717 TGCAGGCTTAAATGGAATCATTAGAC 59.960 38.462 0.00 0.00 42.29 2.59
2954 3447 6.264067 GCAGGCTTAAATGGAATCATTAGACT 59.736 38.462 0.00 0.00 42.29 3.24
2955 3448 7.646314 CAGGCTTAAATGGAATCATTAGACTG 58.354 38.462 9.15 9.15 43.24 3.51
2956 3449 6.774656 AGGCTTAAATGGAATCATTAGACTGG 59.225 38.462 0.00 0.00 42.29 4.00
2957 3450 6.015940 GGCTTAAATGGAATCATTAGACTGGG 60.016 42.308 0.00 0.00 42.29 4.45
2958 3451 6.772716 GCTTAAATGGAATCATTAGACTGGGA 59.227 38.462 0.00 0.00 42.29 4.37
2959 3452 7.040823 GCTTAAATGGAATCATTAGACTGGGAG 60.041 40.741 0.00 0.00 42.29 4.30
2960 3453 4.989875 ATGGAATCATTAGACTGGGAGG 57.010 45.455 0.00 0.00 0.00 4.30
2961 3454 4.007581 TGGAATCATTAGACTGGGAGGA 57.992 45.455 0.00 0.00 0.00 3.71
2962 3455 3.969976 TGGAATCATTAGACTGGGAGGAG 59.030 47.826 0.00 0.00 0.00 3.69
2963 3456 3.326297 GGAATCATTAGACTGGGAGGAGG 59.674 52.174 0.00 0.00 0.00 4.30
2964 3457 4.227197 GAATCATTAGACTGGGAGGAGGA 58.773 47.826 0.00 0.00 0.00 3.71
2965 3458 3.320610 TCATTAGACTGGGAGGAGGAG 57.679 52.381 0.00 0.00 0.00 3.69
2966 3459 2.091055 TCATTAGACTGGGAGGAGGAGG 60.091 54.545 0.00 0.00 0.00 4.30
2967 3460 0.637195 TTAGACTGGGAGGAGGAGGG 59.363 60.000 0.00 0.00 0.00 4.30
2968 3461 0.254154 TAGACTGGGAGGAGGAGGGA 60.254 60.000 0.00 0.00 0.00 4.20
2969 3462 0.933791 AGACTGGGAGGAGGAGGGAT 60.934 60.000 0.00 0.00 0.00 3.85
2970 3463 0.762461 GACTGGGAGGAGGAGGGATG 60.762 65.000 0.00 0.00 0.00 3.51
2971 3464 1.231751 ACTGGGAGGAGGAGGGATGA 61.232 60.000 0.00 0.00 0.00 2.92
2972 3465 0.030705 CTGGGAGGAGGAGGGATGAA 60.031 60.000 0.00 0.00 0.00 2.57
2973 3466 0.649992 TGGGAGGAGGAGGGATGAAT 59.350 55.000 0.00 0.00 0.00 2.57
2974 3467 1.011293 TGGGAGGAGGAGGGATGAATT 59.989 52.381 0.00 0.00 0.00 2.17
2975 3468 2.252676 TGGGAGGAGGAGGGATGAATTA 59.747 50.000 0.00 0.00 0.00 1.40
2976 3469 2.909662 GGGAGGAGGAGGGATGAATTAG 59.090 54.545 0.00 0.00 0.00 1.73
2977 3470 2.909662 GGAGGAGGAGGGATGAATTAGG 59.090 54.545 0.00 0.00 0.00 2.69
2978 3471 2.304470 GAGGAGGAGGGATGAATTAGGC 59.696 54.545 0.00 0.00 0.00 3.93
2979 3472 1.002544 GGAGGAGGGATGAATTAGGCG 59.997 57.143 0.00 0.00 0.00 5.52
2980 3473 0.398318 AGGAGGGATGAATTAGGCGC 59.602 55.000 0.00 0.00 0.00 6.53
2981 3474 0.398318 GGAGGGATGAATTAGGCGCT 59.602 55.000 7.64 0.00 0.00 5.92
2982 3475 1.517242 GAGGGATGAATTAGGCGCTG 58.483 55.000 7.64 0.00 0.00 5.18
2983 3476 0.109342 AGGGATGAATTAGGCGCTGG 59.891 55.000 7.64 0.00 0.00 4.85
2984 3477 1.518903 GGGATGAATTAGGCGCTGGC 61.519 60.000 7.64 0.00 38.90 4.85
2985 3478 0.819259 GGATGAATTAGGCGCTGGCA 60.819 55.000 7.64 0.00 42.47 4.92
2986 3479 0.308993 GATGAATTAGGCGCTGGCAC 59.691 55.000 7.64 0.00 42.47 5.01
2987 3480 0.394216 ATGAATTAGGCGCTGGCACA 60.394 50.000 7.64 1.62 42.47 4.57
2988 3481 0.394216 TGAATTAGGCGCTGGCACAT 60.394 50.000 7.64 0.00 42.47 3.21
2989 3482 0.308993 GAATTAGGCGCTGGCACATC 59.691 55.000 7.64 0.00 42.47 3.06
2990 3483 0.107017 AATTAGGCGCTGGCACATCT 60.107 50.000 7.64 0.00 42.47 2.90
2991 3484 0.816825 ATTAGGCGCTGGCACATCTG 60.817 55.000 7.64 0.00 42.47 2.90
2992 3485 2.184020 TTAGGCGCTGGCACATCTGT 62.184 55.000 7.64 0.00 42.47 3.41
2993 3486 2.578163 TAGGCGCTGGCACATCTGTC 62.578 60.000 7.64 0.00 42.47 3.51
2994 3487 2.435586 GCGCTGGCACATCTGTCT 60.436 61.111 0.00 0.00 38.20 3.41
2995 3488 2.747822 GCGCTGGCACATCTGTCTG 61.748 63.158 0.00 0.00 38.20 3.51
2996 3489 1.375140 CGCTGGCACATCTGTCTGT 60.375 57.895 0.00 0.00 38.20 3.41
2997 3490 0.108662 CGCTGGCACATCTGTCTGTA 60.109 55.000 0.00 0.00 38.20 2.74
2998 3491 1.363744 GCTGGCACATCTGTCTGTAC 58.636 55.000 0.00 0.00 38.20 2.90
2999 3492 1.338105 GCTGGCACATCTGTCTGTACA 60.338 52.381 0.00 0.00 38.20 2.90
3000 3493 2.871637 GCTGGCACATCTGTCTGTACAA 60.872 50.000 0.00 0.00 38.20 2.41
3001 3494 2.738846 CTGGCACATCTGTCTGTACAAC 59.261 50.000 0.00 0.00 38.20 3.32
3002 3495 2.103941 TGGCACATCTGTCTGTACAACA 59.896 45.455 0.00 4.04 34.49 3.33
3003 3496 5.618862 CTGGCACATCTGTCTGTACAACAG 61.619 50.000 22.04 22.04 42.80 3.16
3004 3497 3.393800 GCACATCTGTCTGTACAACAGT 58.606 45.455 24.62 15.75 46.03 3.55
3005 3498 3.809832 GCACATCTGTCTGTACAACAGTT 59.190 43.478 24.62 18.61 46.03 3.16
3006 3499 4.273480 GCACATCTGTCTGTACAACAGTTT 59.727 41.667 24.62 16.54 46.03 2.66
3007 3500 5.559035 GCACATCTGTCTGTACAACAGTTTC 60.559 44.000 24.62 14.04 46.03 2.78
3008 3501 5.755375 CACATCTGTCTGTACAACAGTTTCT 59.245 40.000 24.62 13.37 46.03 2.52
3009 3502 5.755375 ACATCTGTCTGTACAACAGTTTCTG 59.245 40.000 24.62 20.62 46.03 3.02
3011 3504 6.459670 TCTGTCTGTACAACAGTTTCTGTA 57.540 37.500 24.62 10.95 44.62 2.74
3012 3505 6.869695 TCTGTCTGTACAACAGTTTCTGTAA 58.130 36.000 24.62 10.48 44.62 2.41
3013 3506 6.978659 TCTGTCTGTACAACAGTTTCTGTAAG 59.021 38.462 24.62 2.55 44.62 2.34
3014 3507 5.522460 TGTCTGTACAACAGTTTCTGTAAGC 59.478 40.000 6.93 0.00 44.62 3.09
3015 3508 5.522460 GTCTGTACAACAGTTTCTGTAAGCA 59.478 40.000 6.93 1.08 44.62 3.91
3016 3509 6.202954 GTCTGTACAACAGTTTCTGTAAGCAT 59.797 38.462 6.93 0.00 44.62 3.79
3017 3510 6.423905 TCTGTACAACAGTTTCTGTAAGCATC 59.576 38.462 6.93 0.00 44.62 3.91
3018 3511 4.732285 ACAACAGTTTCTGTAAGCATCG 57.268 40.909 2.80 0.00 44.62 3.84
3019 3512 4.127171 ACAACAGTTTCTGTAAGCATCGT 58.873 39.130 2.80 0.00 44.62 3.73
3020 3513 4.211374 ACAACAGTTTCTGTAAGCATCGTC 59.789 41.667 2.80 0.00 44.62 4.20
3021 3514 3.326747 ACAGTTTCTGTAAGCATCGTCC 58.673 45.455 0.27 0.00 43.46 4.79
3022 3515 2.345641 CAGTTTCTGTAAGCATCGTCCG 59.654 50.000 0.00 0.00 0.00 4.79
3023 3516 2.029290 AGTTTCTGTAAGCATCGTCCGT 60.029 45.455 0.00 0.00 0.00 4.69
3024 3517 3.192001 AGTTTCTGTAAGCATCGTCCGTA 59.808 43.478 0.00 0.00 0.00 4.02
3025 3518 3.853831 TTCTGTAAGCATCGTCCGTAA 57.146 42.857 0.00 0.00 0.00 3.18
3026 3519 3.416119 TCTGTAAGCATCGTCCGTAAG 57.584 47.619 0.00 0.00 0.00 2.34
3027 3520 2.751259 TCTGTAAGCATCGTCCGTAAGT 59.249 45.455 0.00 0.00 0.00 2.24
3028 3521 2.852413 CTGTAAGCATCGTCCGTAAGTG 59.148 50.000 0.00 0.00 0.00 3.16
3029 3522 2.488937 TGTAAGCATCGTCCGTAAGTGA 59.511 45.455 0.00 0.00 0.00 3.41
3030 3523 2.736144 AAGCATCGTCCGTAAGTGAA 57.264 45.000 0.00 0.00 0.00 3.18
3031 3524 2.279582 AGCATCGTCCGTAAGTGAAG 57.720 50.000 0.00 0.00 0.00 3.02
3032 3525 0.645868 GCATCGTCCGTAAGTGAAGC 59.354 55.000 0.00 0.00 0.00 3.86
3033 3526 1.990799 CATCGTCCGTAAGTGAAGCA 58.009 50.000 0.00 0.00 0.00 3.91
3034 3527 2.333926 CATCGTCCGTAAGTGAAGCAA 58.666 47.619 0.00 0.00 0.00 3.91
3035 3528 2.736144 TCGTCCGTAAGTGAAGCAAT 57.264 45.000 0.00 0.00 0.00 3.56
3036 3529 3.034721 TCGTCCGTAAGTGAAGCAATT 57.965 42.857 0.00 0.00 0.00 2.32
3037 3530 3.395639 TCGTCCGTAAGTGAAGCAATTT 58.604 40.909 0.00 0.00 0.00 1.82
3038 3531 3.430895 TCGTCCGTAAGTGAAGCAATTTC 59.569 43.478 0.00 0.00 36.29 2.17
3039 3532 3.720920 CGTCCGTAAGTGAAGCAATTTCG 60.721 47.826 0.00 0.00 38.71 3.46
3040 3533 3.117434 CCGTAAGTGAAGCAATTTCGG 57.883 47.619 10.28 10.28 43.10 4.30
3042 3535 3.732943 CGTAAGTGAAGCAATTTCGGAC 58.267 45.455 0.00 0.00 38.71 4.79
3043 3536 3.424433 CGTAAGTGAAGCAATTTCGGACC 60.424 47.826 0.00 0.00 38.71 4.46
3044 3537 1.156736 AGTGAAGCAATTTCGGACCG 58.843 50.000 7.84 7.84 38.71 4.79
3045 3538 0.168128 GTGAAGCAATTTCGGACCGG 59.832 55.000 15.25 0.00 38.71 5.28
3046 3539 0.035598 TGAAGCAATTTCGGACCGGA 59.964 50.000 15.25 0.77 38.71 5.14
3047 3540 0.727398 GAAGCAATTTCGGACCGGAG 59.273 55.000 15.25 0.00 0.00 4.63
3048 3541 1.305930 AAGCAATTTCGGACCGGAGC 61.306 55.000 15.25 5.30 0.00 4.70
3049 3542 2.038269 GCAATTTCGGACCGGAGCA 61.038 57.895 15.25 0.00 0.00 4.26
3050 3543 1.794222 CAATTTCGGACCGGAGCAC 59.206 57.895 15.25 0.00 0.00 4.40
3051 3544 0.953471 CAATTTCGGACCGGAGCACA 60.953 55.000 15.25 0.00 0.00 4.57
3052 3545 0.953960 AATTTCGGACCGGAGCACAC 60.954 55.000 15.25 0.00 0.00 3.82
3053 3546 2.798148 ATTTCGGACCGGAGCACACC 62.798 60.000 15.25 0.30 0.00 4.16
3054 3547 4.988716 TCGGACCGGAGCACACCT 62.989 66.667 15.25 0.00 0.00 4.00
3055 3548 4.436998 CGGACCGGAGCACACCTC 62.437 72.222 9.46 0.00 39.98 3.85
3056 3549 4.436998 GGACCGGAGCACACCTCG 62.437 72.222 9.46 0.00 41.71 4.63
3057 3550 3.681835 GACCGGAGCACACCTCGT 61.682 66.667 9.46 0.00 41.71 4.18
3061 3554 1.807165 CGGAGCACACCTCGTGATG 60.807 63.158 0.00 0.00 46.46 3.07
3062 3555 2.103042 GGAGCACACCTCGTGATGC 61.103 63.158 0.00 5.24 46.46 3.91
3063 3556 1.374631 GAGCACACCTCGTGATGCA 60.375 57.895 16.20 0.00 46.46 3.96
3064 3557 0.950555 GAGCACACCTCGTGATGCAA 60.951 55.000 16.20 0.00 46.46 4.08
3065 3558 3.115190 GAGCACACCTCGTGATGCAAC 62.115 57.143 16.20 0.00 46.46 4.17
3093 3586 2.558795 GAGCATCTATAGCCGGACTTGA 59.441 50.000 5.05 2.31 0.00 3.02
3099 3592 5.353394 TCTATAGCCGGACTTGACAAATT 57.647 39.130 5.05 0.00 0.00 1.82
3102 3595 1.153353 GCCGGACTTGACAAATTCGA 58.847 50.000 5.05 0.00 0.00 3.71
3103 3596 1.737793 GCCGGACTTGACAAATTCGAT 59.262 47.619 5.05 0.00 0.00 3.59
3151 3644 3.279434 GGACACGCCTCATATTTCCTTT 58.721 45.455 0.00 0.00 0.00 3.11
3178 3671 9.755804 TTCACATACAACTCTCTCATATTCATC 57.244 33.333 0.00 0.00 0.00 2.92
3204 3697 7.399765 CCCCCTAAATCCATATAAAATCATGCA 59.600 37.037 0.00 0.00 0.00 3.96
3205 3698 8.472413 CCCCTAAATCCATATAAAATCATGCAG 58.528 37.037 0.00 0.00 0.00 4.41
3252 3746 9.577110 ACGTTCTATACTAATCAAATTTCGTCA 57.423 29.630 0.00 0.00 0.00 4.35
3277 3771 0.029567 GTAGATGACCTGAGTCGCCG 59.970 60.000 0.00 0.00 46.74 6.46
3329 3850 0.037326 GTCTCCATCTGTTGCCGACA 60.037 55.000 0.00 0.00 36.65 4.35
3526 4112 0.633921 CTCCTCCTCCTCTTCCTCCA 59.366 60.000 0.00 0.00 0.00 3.86
3555 4141 0.338120 CCTCCTCCTCCACCTTCTCT 59.662 60.000 0.00 0.00 0.00 3.10
3556 4142 1.273552 CCTCCTCCTCCACCTTCTCTT 60.274 57.143 0.00 0.00 0.00 2.85
3557 4143 2.107366 CTCCTCCTCCACCTTCTCTTC 58.893 57.143 0.00 0.00 0.00 2.87
3558 4144 1.199615 CCTCCTCCACCTTCTCTTCC 58.800 60.000 0.00 0.00 0.00 3.46
3565 4151 1.199615 CACCTTCTCTTCCTCCTCCC 58.800 60.000 0.00 0.00 0.00 4.30
3576 4164 1.288335 TCCTCCTCCCTAGTTCCAGAC 59.712 57.143 0.00 0.00 0.00 3.51
3604 4197 0.187851 ACTTCCCTACGGATCCGGAT 59.812 55.000 35.87 19.21 44.69 4.18
3634 4227 0.680061 AGGAAGAGACGGTGTTGGAC 59.320 55.000 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
157 159 3.314553 GTTGTAGCTTTCTACTGCGTGA 58.685 45.455 0.00 0.00 44.26 4.35
284 286 2.959465 AGCTTTCTACTGCCTGGTTT 57.041 45.000 0.00 0.00 0.00 3.27
352 354 3.478857 TTTTCTTCTTCCAGTACCGCA 57.521 42.857 0.00 0.00 0.00 5.69
761 793 4.017958 TGTCATCTCCTACCTCTGACTTCT 60.018 45.833 0.00 0.00 37.65 2.85
786 818 1.670087 CGCTCTGATCCACACGTTCTT 60.670 52.381 0.00 0.00 0.00 2.52
824 856 4.630894 TTCATGCGAAACAGTTTTCAGT 57.369 36.364 0.00 0.00 41.22 3.41
836 868 0.871722 CCTGGACGTTTTCATGCGAA 59.128 50.000 0.00 0.00 0.00 4.70
861 893 4.201753 GCCGTGCGATCTAGTATAATCGTA 60.202 45.833 11.74 5.98 44.99 3.43
928 960 1.888512 TGAAAATGCAGAGCTTGGACC 59.111 47.619 0.00 0.00 0.00 4.46
958 990 4.326766 GAGCTGCGCGCACCAAAA 62.327 61.111 33.09 8.28 42.61 2.44
1196 1241 2.504920 CAGCTGTCGGTGGATAGGA 58.495 57.895 5.25 0.00 35.06 2.94
1557 1632 0.387202 CGGTGGAGAGCTCGATGAAT 59.613 55.000 8.37 0.00 0.00 2.57
1600 1675 2.529619 GCAAGAAGAGGCGCGGATC 61.530 63.158 8.83 0.00 0.00 3.36
1601 1676 2.512515 GCAAGAAGAGGCGCGGAT 60.513 61.111 8.83 0.00 0.00 4.18
1654 1751 1.134699 TCTGAGCGATTAGTTGGCCAG 60.135 52.381 5.11 0.00 0.00 4.85
1846 1954 2.048127 GACCTGCAGACGGTGACC 60.048 66.667 17.39 0.00 34.19 4.02
1868 1976 3.745803 GTGCTTCCAGCTGCTGCC 61.746 66.667 23.86 11.61 42.97 4.85
1886 1994 4.456253 CTCCCGGTCGTCGTCGTG 62.456 72.222 0.00 0.00 38.33 4.35
1934 2057 0.969149 TCACCATCACGTTGCTCTCT 59.031 50.000 0.00 0.00 0.00 3.10
2006 2129 3.082579 GCTCAGGTGTAGCCCCTCG 62.083 68.421 0.00 0.00 38.26 4.63
2053 2176 3.012518 GTTATGATGACAGTGCAAGCCT 58.987 45.455 0.00 0.00 0.00 4.58
2105 2228 8.115490 AGCAGCATATTGGGAGTAAATTAATC 57.885 34.615 0.00 0.00 0.00 1.75
2107 2230 7.059788 TGAGCAGCATATTGGGAGTAAATTAA 58.940 34.615 0.00 0.00 0.00 1.40
2108 2231 6.600388 TGAGCAGCATATTGGGAGTAAATTA 58.400 36.000 0.00 0.00 0.00 1.40
2109 2232 5.448654 TGAGCAGCATATTGGGAGTAAATT 58.551 37.500 0.00 0.00 0.00 1.82
2110 2233 5.052693 TGAGCAGCATATTGGGAGTAAAT 57.947 39.130 0.00 0.00 0.00 1.40
2113 2236 4.349048 AGAATGAGCAGCATATTGGGAGTA 59.651 41.667 0.00 0.00 35.78 2.59
2118 2241 8.102800 TGTAATAAGAATGAGCAGCATATTGG 57.897 34.615 0.00 0.00 35.78 3.16
2123 2246 7.636150 AAACTGTAATAAGAATGAGCAGCAT 57.364 32.000 0.00 0.00 39.43 3.79
2141 2264 8.154856 TCCTCTTTAAGCTTGTACATAAACTGT 58.845 33.333 9.86 0.00 42.13 3.55
2144 2267 8.319143 TGTCCTCTTTAAGCTTGTACATAAAC 57.681 34.615 9.86 0.00 0.00 2.01
2150 2273 6.582672 GCAAAATGTCCTCTTTAAGCTTGTAC 59.417 38.462 9.86 0.00 0.00 2.90
2151 2274 6.490040 AGCAAAATGTCCTCTTTAAGCTTGTA 59.510 34.615 9.86 0.00 0.00 2.41
2153 2276 5.776744 AGCAAAATGTCCTCTTTAAGCTTG 58.223 37.500 9.86 0.00 0.00 4.01
2158 2281 5.048504 CAGCAGAGCAAAATGTCCTCTTTAA 60.049 40.000 0.00 0.00 33.89 1.52
2159 2282 4.456911 CAGCAGAGCAAAATGTCCTCTTTA 59.543 41.667 0.00 0.00 33.89 1.85
2160 2283 3.255149 CAGCAGAGCAAAATGTCCTCTTT 59.745 43.478 0.00 0.00 33.89 2.52
2161 2284 2.818432 CAGCAGAGCAAAATGTCCTCTT 59.182 45.455 0.00 0.00 33.89 2.85
2162 2285 2.224719 ACAGCAGAGCAAAATGTCCTCT 60.225 45.455 0.00 0.00 36.43 3.69
2168 2291 3.190744 AGATGTCACAGCAGAGCAAAATG 59.809 43.478 0.00 0.00 0.00 2.32
2173 2296 3.528532 CATAAGATGTCACAGCAGAGCA 58.471 45.455 0.00 0.00 0.00 4.26
2175 2298 2.871022 GCCATAAGATGTCACAGCAGAG 59.129 50.000 0.00 0.00 0.00 3.35
2179 2302 2.797156 CGTAGCCATAAGATGTCACAGC 59.203 50.000 0.00 0.00 0.00 4.40
2181 2308 2.483013 GCCGTAGCCATAAGATGTCACA 60.483 50.000 0.00 0.00 0.00 3.58
2184 2311 2.821991 AGCCGTAGCCATAAGATGTC 57.178 50.000 0.00 0.00 41.25 3.06
2185 2312 2.545952 CGAAGCCGTAGCCATAAGATGT 60.546 50.000 0.00 0.00 41.25 3.06
2186 2313 2.061773 CGAAGCCGTAGCCATAAGATG 58.938 52.381 0.00 0.00 41.25 2.90
2187 2314 1.961394 TCGAAGCCGTAGCCATAAGAT 59.039 47.619 0.00 0.00 41.25 2.40
2188 2315 1.395635 TCGAAGCCGTAGCCATAAGA 58.604 50.000 0.00 0.00 41.25 2.10
2189 2316 2.440539 ATCGAAGCCGTAGCCATAAG 57.559 50.000 0.00 0.00 41.25 1.73
2190 2317 2.902705 AATCGAAGCCGTAGCCATAA 57.097 45.000 0.00 0.00 41.25 1.90
2191 2318 2.624364 TGTAATCGAAGCCGTAGCCATA 59.376 45.455 0.00 0.00 41.25 2.74
2192 2319 1.411246 TGTAATCGAAGCCGTAGCCAT 59.589 47.619 0.00 0.00 41.25 4.40
2193 2320 0.818938 TGTAATCGAAGCCGTAGCCA 59.181 50.000 0.00 0.00 41.25 4.75
2194 2321 1.792949 CATGTAATCGAAGCCGTAGCC 59.207 52.381 0.00 0.00 41.25 3.93
2195 2322 1.192534 GCATGTAATCGAAGCCGTAGC 59.807 52.381 0.00 0.00 40.32 3.58
2196 2323 2.469826 TGCATGTAATCGAAGCCGTAG 58.530 47.619 0.00 0.00 37.05 3.51
2214 2341 3.125316 CAGTAACTTCCGTCCAAAGATGC 59.875 47.826 0.00 0.00 0.00 3.91
2215 2342 4.152402 CACAGTAACTTCCGTCCAAAGATG 59.848 45.833 0.00 0.00 0.00 2.90
2216 2343 4.202326 ACACAGTAACTTCCGTCCAAAGAT 60.202 41.667 0.00 0.00 0.00 2.40
2238 2375 6.034150 GCTGGTACTTTTTGTGTGTGTAAAAC 59.966 38.462 0.00 0.00 0.00 2.43
2240 2377 5.183331 TGCTGGTACTTTTTGTGTGTGTAAA 59.817 36.000 0.00 0.00 0.00 2.01
2241 2378 4.700692 TGCTGGTACTTTTTGTGTGTGTAA 59.299 37.500 0.00 0.00 0.00 2.41
2242 2379 4.262617 TGCTGGTACTTTTTGTGTGTGTA 58.737 39.130 0.00 0.00 0.00 2.90
2244 2381 3.773860 TGCTGGTACTTTTTGTGTGTG 57.226 42.857 0.00 0.00 0.00 3.82
2245 2382 5.337578 AAATGCTGGTACTTTTTGTGTGT 57.662 34.783 0.00 0.00 0.00 3.72
2270 2498 5.300034 TCAGTCTCGTACAAACTACTGGAAA 59.700 40.000 0.00 0.00 36.01 3.13
2272 2500 4.214971 GTCAGTCTCGTACAAACTACTGGA 59.785 45.833 0.00 0.00 36.01 3.86
2273 2501 4.023450 TGTCAGTCTCGTACAAACTACTGG 60.023 45.833 0.00 0.00 36.01 4.00
2334 2783 9.624697 CTTCAACTGCAGCTATTTGTTTAATAA 57.375 29.630 15.27 0.00 0.00 1.40
2335 2784 8.792633 ACTTCAACTGCAGCTATTTGTTTAATA 58.207 29.630 15.27 0.00 0.00 0.98
2386 2837 2.092323 TGACGATCTCGACAGGTGAAT 58.908 47.619 6.60 0.00 43.02 2.57
2392 2843 2.902065 TCAGTTGACGATCTCGACAG 57.098 50.000 6.60 6.85 43.70 3.51
2468 2922 0.250513 GAAGCCTTCGTCCACCTGAT 59.749 55.000 0.00 0.00 0.00 2.90
2514 2968 1.300233 CAACGCCGCCTCTATCCTC 60.300 63.158 0.00 0.00 0.00 3.71
2516 2970 2.280186 CCAACGCCGCCTCTATCC 60.280 66.667 0.00 0.00 0.00 2.59
2563 3021 4.805744 ACCTTGATCTCTACCGGAGTATT 58.194 43.478 9.46 0.00 42.40 1.89
2566 3024 2.830651 ACCTTGATCTCTACCGGAGT 57.169 50.000 9.46 0.00 42.40 3.85
2573 3035 4.081420 GTGCTCCTTGAACCTTGATCTCTA 60.081 45.833 0.00 0.00 0.00 2.43
2610 3076 1.812922 CGGACACTCTGCCAGCATC 60.813 63.158 0.00 0.00 0.00 3.91
2631 3097 7.967771 AATTTATTTGCATAAAATTTGCCGC 57.032 28.000 7.83 0.00 38.18 6.53
2706 3199 7.333528 AGTTTTGTCTTGAAAGATGCAGTAA 57.666 32.000 0.00 0.00 37.39 2.24
2707 3200 6.942532 AGTTTTGTCTTGAAAGATGCAGTA 57.057 33.333 0.00 0.00 37.39 2.74
2708 3201 5.841957 AGTTTTGTCTTGAAAGATGCAGT 57.158 34.783 0.00 0.00 37.39 4.40
2709 3202 6.634436 GTGTAGTTTTGTCTTGAAAGATGCAG 59.366 38.462 0.00 0.00 37.39 4.41
2710 3203 6.318648 AGTGTAGTTTTGTCTTGAAAGATGCA 59.681 34.615 0.00 0.00 37.39 3.96
2711 3204 6.634436 CAGTGTAGTTTTGTCTTGAAAGATGC 59.366 38.462 0.00 0.00 37.39 3.91
2714 3207 6.035650 CGACAGTGTAGTTTTGTCTTGAAAGA 59.964 38.462 0.00 0.00 39.18 2.52
2720 3213 5.416947 AGAACGACAGTGTAGTTTTGTCTT 58.583 37.500 20.69 0.00 39.18 3.01
2736 3229 2.535934 TTTGTGTGTGCAAGAACGAC 57.464 45.000 0.00 0.00 0.00 4.34
2761 3254 8.213911 ACTGATGAAGTAGCACAGAAAGTGTAC 61.214 40.741 0.00 0.00 43.45 2.90
2762 3255 6.239317 ACTGATGAAGTAGCACAGAAAGTGTA 60.239 38.462 0.00 0.00 43.45 2.90
2763 3256 5.453903 ACTGATGAAGTAGCACAGAAAGTGT 60.454 40.000 0.00 0.00 43.45 3.55
2764 3257 4.993584 ACTGATGAAGTAGCACAGAAAGTG 59.006 41.667 0.00 0.00 44.00 3.16
2765 3258 5.011533 AGACTGATGAAGTAGCACAGAAAGT 59.988 40.000 0.00 0.00 40.07 2.66
2766 3259 5.477510 AGACTGATGAAGTAGCACAGAAAG 58.522 41.667 0.00 0.00 40.07 2.62
2767 3260 5.011023 TGAGACTGATGAAGTAGCACAGAAA 59.989 40.000 0.00 0.00 40.07 2.52
2768 3261 4.524328 TGAGACTGATGAAGTAGCACAGAA 59.476 41.667 0.00 0.00 40.07 3.02
2769 3262 4.082125 TGAGACTGATGAAGTAGCACAGA 58.918 43.478 0.00 0.00 40.07 3.41
2770 3263 4.446994 TGAGACTGATGAAGTAGCACAG 57.553 45.455 0.00 0.00 40.07 3.66
2771 3264 6.530019 TTATGAGACTGATGAAGTAGCACA 57.470 37.500 0.00 0.00 40.07 4.57
2772 3265 9.534565 TTTATTATGAGACTGATGAAGTAGCAC 57.465 33.333 0.00 0.00 40.07 4.40
2808 3301 9.216117 GGACTTTCTCAAGCTAACATAGTTTAA 57.784 33.333 0.00 0.00 32.57 1.52
2809 3302 8.594550 AGGACTTTCTCAAGCTAACATAGTTTA 58.405 33.333 0.00 0.00 32.57 2.01
2810 3303 7.454225 AGGACTTTCTCAAGCTAACATAGTTT 58.546 34.615 0.00 0.00 32.57 2.66
2811 3304 7.010339 AGGACTTTCTCAAGCTAACATAGTT 57.990 36.000 0.00 0.00 32.57 2.24
2812 3305 6.613153 AGGACTTTCTCAAGCTAACATAGT 57.387 37.500 0.00 0.00 32.57 2.12
2813 3306 6.876257 ACAAGGACTTTCTCAAGCTAACATAG 59.124 38.462 0.00 0.00 32.57 2.23
2814 3307 6.769512 ACAAGGACTTTCTCAAGCTAACATA 58.230 36.000 0.00 0.00 32.57 2.29
2815 3308 5.625150 ACAAGGACTTTCTCAAGCTAACAT 58.375 37.500 0.00 0.00 32.57 2.71
2816 3309 5.036117 ACAAGGACTTTCTCAAGCTAACA 57.964 39.130 0.00 0.00 32.57 2.41
2817 3310 7.173390 ACAATACAAGGACTTTCTCAAGCTAAC 59.827 37.037 0.00 0.00 32.57 2.34
2818 3311 7.173218 CACAATACAAGGACTTTCTCAAGCTAA 59.827 37.037 0.00 0.00 32.57 3.09
2819 3312 6.650807 CACAATACAAGGACTTTCTCAAGCTA 59.349 38.462 0.00 0.00 32.57 3.32
2820 3313 5.471456 CACAATACAAGGACTTTCTCAAGCT 59.529 40.000 0.00 0.00 32.57 3.74
2821 3314 5.335191 CCACAATACAAGGACTTTCTCAAGC 60.335 44.000 0.00 0.00 32.57 4.01
2822 3315 5.182001 CCCACAATACAAGGACTTTCTCAAG 59.818 44.000 0.00 0.00 35.92 3.02
2823 3316 5.070001 CCCACAATACAAGGACTTTCTCAA 58.930 41.667 0.00 0.00 0.00 3.02
2824 3317 4.349636 TCCCACAATACAAGGACTTTCTCA 59.650 41.667 0.00 0.00 0.00 3.27
2825 3318 4.695928 GTCCCACAATACAAGGACTTTCTC 59.304 45.833 0.80 0.00 44.46 2.87
2826 3319 4.652822 GTCCCACAATACAAGGACTTTCT 58.347 43.478 0.80 0.00 44.46 2.52
2827 3320 3.435671 CGTCCCACAATACAAGGACTTTC 59.564 47.826 6.48 0.00 45.45 2.62
2828 3321 3.408634 CGTCCCACAATACAAGGACTTT 58.591 45.455 6.48 0.00 45.45 2.66
2829 3322 2.290071 CCGTCCCACAATACAAGGACTT 60.290 50.000 6.48 0.00 45.45 3.01
2830 3323 1.278127 CCGTCCCACAATACAAGGACT 59.722 52.381 6.48 0.00 45.45 3.85
2831 3324 1.276989 TCCGTCCCACAATACAAGGAC 59.723 52.381 0.00 0.00 44.42 3.85
2832 3325 1.553248 CTCCGTCCCACAATACAAGGA 59.447 52.381 0.00 0.00 0.00 3.36
2833 3326 1.406887 CCTCCGTCCCACAATACAAGG 60.407 57.143 0.00 0.00 0.00 3.61
2834 3327 1.406887 CCCTCCGTCCCACAATACAAG 60.407 57.143 0.00 0.00 0.00 3.16
2835 3328 0.616371 CCCTCCGTCCCACAATACAA 59.384 55.000 0.00 0.00 0.00 2.41
2836 3329 0.252330 TCCCTCCGTCCCACAATACA 60.252 55.000 0.00 0.00 0.00 2.29
2837 3330 0.464452 CTCCCTCCGTCCCACAATAC 59.536 60.000 0.00 0.00 0.00 1.89
2838 3331 0.042131 ACTCCCTCCGTCCCACAATA 59.958 55.000 0.00 0.00 0.00 1.90
2839 3332 0.042131 TACTCCCTCCGTCCCACAAT 59.958 55.000 0.00 0.00 0.00 2.71
2840 3333 0.613853 CTACTCCCTCCGTCCCACAA 60.614 60.000 0.00 0.00 0.00 3.33
2841 3334 1.000019 CTACTCCCTCCGTCCCACA 60.000 63.158 0.00 0.00 0.00 4.17
2842 3335 0.614134 AACTACTCCCTCCGTCCCAC 60.614 60.000 0.00 0.00 0.00 4.61
2843 3336 0.115745 AAACTACTCCCTCCGTCCCA 59.884 55.000 0.00 0.00 0.00 4.37
2844 3337 1.273759 AAAACTACTCCCTCCGTCCC 58.726 55.000 0.00 0.00 0.00 4.46
2861 3354 1.519751 CCGGTCCGGTGCATCAAAAA 61.520 55.000 23.02 0.00 42.73 1.94
2862 3355 1.969064 CCGGTCCGGTGCATCAAAA 60.969 57.895 23.02 0.00 42.73 2.44
2863 3356 2.359354 CCGGTCCGGTGCATCAAA 60.359 61.111 23.02 0.00 42.73 2.69
2873 3366 1.826054 ATCTCTCTGCTCCGGTCCG 60.826 63.158 3.60 3.60 0.00 4.79
2874 3367 1.739049 CATCTCTCTGCTCCGGTCC 59.261 63.158 0.00 0.00 0.00 4.46
2875 3368 1.067250 GCATCTCTCTGCTCCGGTC 59.933 63.158 0.00 0.00 39.12 4.79
2876 3369 3.215245 GCATCTCTCTGCTCCGGT 58.785 61.111 0.00 0.00 39.12 5.28
2882 3375 4.749099 CCTGTAAATGTAGCATCTCTCTGC 59.251 45.833 0.00 0.00 42.62 4.26
2883 3376 4.749099 GCCTGTAAATGTAGCATCTCTCTG 59.251 45.833 0.00 0.00 0.00 3.35
2884 3377 4.406972 TGCCTGTAAATGTAGCATCTCTCT 59.593 41.667 0.00 0.00 0.00 3.10
2885 3378 4.697514 TGCCTGTAAATGTAGCATCTCTC 58.302 43.478 0.00 0.00 0.00 3.20
2886 3379 4.760530 TGCCTGTAAATGTAGCATCTCT 57.239 40.909 0.00 0.00 0.00 3.10
2887 3380 4.878397 AGTTGCCTGTAAATGTAGCATCTC 59.122 41.667 0.00 0.00 29.80 2.75
2888 3381 4.848357 AGTTGCCTGTAAATGTAGCATCT 58.152 39.130 0.00 0.00 32.67 2.90
2889 3382 5.567138 AAGTTGCCTGTAAATGTAGCATC 57.433 39.130 0.00 0.00 32.67 3.91
2890 3383 5.391950 CGAAAGTTGCCTGTAAATGTAGCAT 60.392 40.000 0.00 0.00 32.67 3.79
2891 3384 4.083537 CGAAAGTTGCCTGTAAATGTAGCA 60.084 41.667 0.00 0.00 0.00 3.49
2892 3385 4.153475 TCGAAAGTTGCCTGTAAATGTAGC 59.847 41.667 0.00 0.00 0.00 3.58
2893 3386 5.856126 TCGAAAGTTGCCTGTAAATGTAG 57.144 39.130 0.00 0.00 0.00 2.74
2894 3387 5.935206 TCATCGAAAGTTGCCTGTAAATGTA 59.065 36.000 0.00 0.00 0.00 2.29
2895 3388 4.759693 TCATCGAAAGTTGCCTGTAAATGT 59.240 37.500 0.00 0.00 0.00 2.71
2896 3389 5.295431 TCATCGAAAGTTGCCTGTAAATG 57.705 39.130 0.00 0.00 0.00 2.32
2897 3390 5.957842 TTCATCGAAAGTTGCCTGTAAAT 57.042 34.783 0.00 0.00 0.00 1.40
2898 3391 5.957842 ATTCATCGAAAGTTGCCTGTAAA 57.042 34.783 0.00 0.00 0.00 2.01
2899 3392 5.957842 AATTCATCGAAAGTTGCCTGTAA 57.042 34.783 0.00 0.00 0.00 2.41
2900 3393 5.957842 AAATTCATCGAAAGTTGCCTGTA 57.042 34.783 0.00 0.00 0.00 2.74
2901 3394 4.853924 AAATTCATCGAAAGTTGCCTGT 57.146 36.364 0.00 0.00 0.00 4.00
2902 3395 6.863126 AGTTTAAATTCATCGAAAGTTGCCTG 59.137 34.615 0.00 0.00 0.00 4.85
2903 3396 6.981722 AGTTTAAATTCATCGAAAGTTGCCT 58.018 32.000 0.00 0.00 0.00 4.75
2904 3397 7.501515 CAAGTTTAAATTCATCGAAAGTTGCC 58.498 34.615 0.00 0.00 36.16 4.52
2906 3399 8.060020 TGCAAGTTTAAATTCATCGAAAGTTG 57.940 30.769 8.66 8.66 41.74 3.16
2907 3400 7.382218 CCTGCAAGTTTAAATTCATCGAAAGTT 59.618 33.333 0.00 0.00 0.00 2.66
2908 3401 6.863126 CCTGCAAGTTTAAATTCATCGAAAGT 59.137 34.615 0.00 0.00 0.00 2.66
2909 3402 6.183360 GCCTGCAAGTTTAAATTCATCGAAAG 60.183 38.462 0.00 0.00 0.00 2.62
2910 3403 5.633182 GCCTGCAAGTTTAAATTCATCGAAA 59.367 36.000 0.00 0.00 0.00 3.46
2911 3404 5.048083 AGCCTGCAAGTTTAAATTCATCGAA 60.048 36.000 0.00 0.00 0.00 3.71
2912 3405 4.458989 AGCCTGCAAGTTTAAATTCATCGA 59.541 37.500 0.00 0.00 0.00 3.59
2913 3406 4.737054 AGCCTGCAAGTTTAAATTCATCG 58.263 39.130 0.00 0.00 0.00 3.84
2914 3407 8.532977 TTTAAGCCTGCAAGTTTAAATTCATC 57.467 30.769 11.66 0.00 30.86 2.92
2915 3408 8.938906 CATTTAAGCCTGCAAGTTTAAATTCAT 58.061 29.630 20.75 5.25 38.55 2.57
2916 3409 7.387397 CCATTTAAGCCTGCAAGTTTAAATTCA 59.613 33.333 20.75 2.77 38.55 2.57
2917 3410 7.602265 TCCATTTAAGCCTGCAAGTTTAAATTC 59.398 33.333 20.75 0.00 38.55 2.17
2918 3411 7.449247 TCCATTTAAGCCTGCAAGTTTAAATT 58.551 30.769 20.75 9.09 38.55 1.82
2919 3412 7.003402 TCCATTTAAGCCTGCAAGTTTAAAT 57.997 32.000 18.71 18.71 39.89 1.40
2920 3413 6.412362 TCCATTTAAGCCTGCAAGTTTAAA 57.588 33.333 16.35 16.35 36.32 1.52
2921 3414 6.412362 TTCCATTTAAGCCTGCAAGTTTAA 57.588 33.333 0.68 0.68 0.00 1.52
2922 3415 6.210385 TGATTCCATTTAAGCCTGCAAGTTTA 59.790 34.615 0.00 0.00 0.00 2.01
2923 3416 4.953940 TTCCATTTAAGCCTGCAAGTTT 57.046 36.364 0.00 0.00 0.00 2.66
2924 3417 4.527816 TGATTCCATTTAAGCCTGCAAGTT 59.472 37.500 0.00 0.00 0.00 2.66
2925 3418 4.088634 TGATTCCATTTAAGCCTGCAAGT 58.911 39.130 0.00 0.00 0.00 3.16
2926 3419 4.724074 TGATTCCATTTAAGCCTGCAAG 57.276 40.909 0.00 0.00 0.00 4.01
2927 3420 5.680594 AATGATTCCATTTAAGCCTGCAA 57.319 34.783 0.00 0.00 39.86 4.08
2928 3421 6.039717 GTCTAATGATTCCATTTAAGCCTGCA 59.960 38.462 0.00 0.00 42.56 4.41
2929 3422 6.264067 AGTCTAATGATTCCATTTAAGCCTGC 59.736 38.462 0.00 0.00 42.56 4.85
2930 3423 7.255381 CCAGTCTAATGATTCCATTTAAGCCTG 60.255 40.741 0.00 0.00 42.56 4.85
2931 3424 6.774656 CCAGTCTAATGATTCCATTTAAGCCT 59.225 38.462 0.00 0.00 42.56 4.58
2932 3425 6.015940 CCCAGTCTAATGATTCCATTTAAGCC 60.016 42.308 0.00 0.00 42.56 4.35
2933 3426 6.772716 TCCCAGTCTAATGATTCCATTTAAGC 59.227 38.462 0.00 0.00 42.56 3.09
2934 3427 7.446625 CCTCCCAGTCTAATGATTCCATTTAAG 59.553 40.741 0.00 0.00 42.56 1.85
2935 3428 7.128728 TCCTCCCAGTCTAATGATTCCATTTAA 59.871 37.037 0.00 0.00 42.56 1.52
2936 3429 6.619437 TCCTCCCAGTCTAATGATTCCATTTA 59.381 38.462 0.00 0.00 42.56 1.40
2937 3430 5.433051 TCCTCCCAGTCTAATGATTCCATTT 59.567 40.000 0.00 0.00 42.56 2.32
2938 3431 4.977739 TCCTCCCAGTCTAATGATTCCATT 59.022 41.667 0.00 0.00 44.56 3.16
2939 3432 4.570926 TCCTCCCAGTCTAATGATTCCAT 58.429 43.478 0.00 0.00 33.66 3.41
2940 3433 3.969976 CTCCTCCCAGTCTAATGATTCCA 59.030 47.826 0.00 0.00 0.00 3.53
2941 3434 3.326297 CCTCCTCCCAGTCTAATGATTCC 59.674 52.174 0.00 0.00 0.00 3.01
2942 3435 4.227197 TCCTCCTCCCAGTCTAATGATTC 58.773 47.826 0.00 0.00 0.00 2.52
2943 3436 4.230455 CTCCTCCTCCCAGTCTAATGATT 58.770 47.826 0.00 0.00 0.00 2.57
2944 3437 3.439260 CCTCCTCCTCCCAGTCTAATGAT 60.439 52.174 0.00 0.00 0.00 2.45
2945 3438 2.091055 CCTCCTCCTCCCAGTCTAATGA 60.091 54.545 0.00 0.00 0.00 2.57
2946 3439 2.324541 CCTCCTCCTCCCAGTCTAATG 58.675 57.143 0.00 0.00 0.00 1.90
2947 3440 1.221781 CCCTCCTCCTCCCAGTCTAAT 59.778 57.143 0.00 0.00 0.00 1.73
2948 3441 0.637195 CCCTCCTCCTCCCAGTCTAA 59.363 60.000 0.00 0.00 0.00 2.10
2949 3442 0.254154 TCCCTCCTCCTCCCAGTCTA 60.254 60.000 0.00 0.00 0.00 2.59
2950 3443 0.933791 ATCCCTCCTCCTCCCAGTCT 60.934 60.000 0.00 0.00 0.00 3.24
2951 3444 0.762461 CATCCCTCCTCCTCCCAGTC 60.762 65.000 0.00 0.00 0.00 3.51
2952 3445 1.231751 TCATCCCTCCTCCTCCCAGT 61.232 60.000 0.00 0.00 0.00 4.00
2953 3446 0.030705 TTCATCCCTCCTCCTCCCAG 60.031 60.000 0.00 0.00 0.00 4.45
2954 3447 0.649992 ATTCATCCCTCCTCCTCCCA 59.350 55.000 0.00 0.00 0.00 4.37
2955 3448 1.826447 AATTCATCCCTCCTCCTCCC 58.174 55.000 0.00 0.00 0.00 4.30
2956 3449 2.909662 CCTAATTCATCCCTCCTCCTCC 59.090 54.545 0.00 0.00 0.00 4.30
2957 3450 2.304470 GCCTAATTCATCCCTCCTCCTC 59.696 54.545 0.00 0.00 0.00 3.71
2958 3451 2.343625 GCCTAATTCATCCCTCCTCCT 58.656 52.381 0.00 0.00 0.00 3.69
2959 3452 1.002544 CGCCTAATTCATCCCTCCTCC 59.997 57.143 0.00 0.00 0.00 4.30
2960 3453 1.609320 GCGCCTAATTCATCCCTCCTC 60.609 57.143 0.00 0.00 0.00 3.71
2961 3454 0.398318 GCGCCTAATTCATCCCTCCT 59.602 55.000 0.00 0.00 0.00 3.69
2962 3455 0.398318 AGCGCCTAATTCATCCCTCC 59.602 55.000 2.29 0.00 0.00 4.30
2963 3456 1.517242 CAGCGCCTAATTCATCCCTC 58.483 55.000 2.29 0.00 0.00 4.30
2964 3457 0.109342 CCAGCGCCTAATTCATCCCT 59.891 55.000 2.29 0.00 0.00 4.20
2965 3458 1.518903 GCCAGCGCCTAATTCATCCC 61.519 60.000 2.29 0.00 0.00 3.85
2966 3459 0.819259 TGCCAGCGCCTAATTCATCC 60.819 55.000 2.29 0.00 0.00 3.51
2967 3460 0.308993 GTGCCAGCGCCTAATTCATC 59.691 55.000 2.29 0.00 0.00 2.92
2968 3461 0.394216 TGTGCCAGCGCCTAATTCAT 60.394 50.000 2.29 0.00 0.00 2.57
2969 3462 0.394216 ATGTGCCAGCGCCTAATTCA 60.394 50.000 2.29 0.00 0.00 2.57
2970 3463 0.308993 GATGTGCCAGCGCCTAATTC 59.691 55.000 2.29 0.00 0.00 2.17
2971 3464 0.107017 AGATGTGCCAGCGCCTAATT 60.107 50.000 2.29 0.00 0.00 1.40
2972 3465 0.816825 CAGATGTGCCAGCGCCTAAT 60.817 55.000 2.29 0.00 0.00 1.73
2973 3466 1.450134 CAGATGTGCCAGCGCCTAA 60.450 57.895 2.29 0.00 0.00 2.69
2974 3467 2.187685 CAGATGTGCCAGCGCCTA 59.812 61.111 2.29 0.00 0.00 3.93
2975 3468 3.965539 GACAGATGTGCCAGCGCCT 62.966 63.158 2.29 0.00 0.00 5.52
2976 3469 3.503363 GACAGATGTGCCAGCGCC 61.503 66.667 2.29 0.00 0.00 6.53
2977 3470 2.435586 AGACAGATGTGCCAGCGC 60.436 61.111 0.00 0.00 0.00 5.92
2978 3471 0.108662 TACAGACAGATGTGCCAGCG 60.109 55.000 0.00 0.00 34.56 5.18
2979 3472 1.338105 TGTACAGACAGATGTGCCAGC 60.338 52.381 0.00 0.00 35.20 4.85
2980 3473 2.738846 GTTGTACAGACAGATGTGCCAG 59.261 50.000 0.00 0.00 36.76 4.85
2981 3474 2.103941 TGTTGTACAGACAGATGTGCCA 59.896 45.455 0.00 0.00 36.76 4.92
2982 3475 2.766313 TGTTGTACAGACAGATGTGCC 58.234 47.619 0.00 0.00 36.76 5.01
2994 3487 5.176774 CGATGCTTACAGAAACTGTTGTACA 59.823 40.000 9.63 0.00 42.59 2.90
2995 3488 5.176958 ACGATGCTTACAGAAACTGTTGTAC 59.823 40.000 9.63 0.00 42.59 2.90
2996 3489 5.294356 ACGATGCTTACAGAAACTGTTGTA 58.706 37.500 9.63 4.33 42.59 2.41
2997 3490 4.127171 ACGATGCTTACAGAAACTGTTGT 58.873 39.130 9.63 0.00 42.59 3.32
2998 3491 4.377431 GGACGATGCTTACAGAAACTGTTG 60.377 45.833 9.63 5.29 42.59 3.33
2999 3492 3.746492 GGACGATGCTTACAGAAACTGTT 59.254 43.478 9.63 0.00 42.59 3.16
3001 3494 2.345641 CGGACGATGCTTACAGAAACTG 59.654 50.000 0.00 0.00 37.52 3.16
3002 3495 2.029290 ACGGACGATGCTTACAGAAACT 60.029 45.455 0.00 0.00 0.00 2.66
3003 3496 2.334838 ACGGACGATGCTTACAGAAAC 58.665 47.619 0.00 0.00 0.00 2.78
3004 3497 2.736144 ACGGACGATGCTTACAGAAA 57.264 45.000 0.00 0.00 0.00 2.52
3005 3498 3.192001 ACTTACGGACGATGCTTACAGAA 59.808 43.478 0.00 0.00 0.00 3.02
3006 3499 2.751259 ACTTACGGACGATGCTTACAGA 59.249 45.455 0.00 0.00 0.00 3.41
3007 3500 2.852413 CACTTACGGACGATGCTTACAG 59.148 50.000 0.00 0.00 0.00 2.74
3008 3501 2.488937 TCACTTACGGACGATGCTTACA 59.511 45.455 0.00 0.00 0.00 2.41
3009 3502 3.141002 TCACTTACGGACGATGCTTAC 57.859 47.619 0.00 0.00 0.00 2.34
3010 3503 3.766151 CTTCACTTACGGACGATGCTTA 58.234 45.455 0.00 0.00 0.00 3.09
3011 3504 2.607187 CTTCACTTACGGACGATGCTT 58.393 47.619 0.00 0.00 0.00 3.91
3012 3505 1.736032 GCTTCACTTACGGACGATGCT 60.736 52.381 0.00 0.00 0.00 3.79
3013 3506 0.645868 GCTTCACTTACGGACGATGC 59.354 55.000 0.00 0.00 0.00 3.91
3014 3507 1.990799 TGCTTCACTTACGGACGATG 58.009 50.000 0.00 0.00 0.00 3.84
3015 3508 2.736144 TTGCTTCACTTACGGACGAT 57.264 45.000 0.00 0.00 0.00 3.73
3016 3509 2.736144 ATTGCTTCACTTACGGACGA 57.264 45.000 0.00 0.00 0.00 4.20
3017 3510 3.720920 CGAAATTGCTTCACTTACGGACG 60.721 47.826 0.00 0.00 33.17 4.79
3018 3511 3.424433 CCGAAATTGCTTCACTTACGGAC 60.424 47.826 0.00 0.00 40.16 4.79
3019 3512 2.739913 CCGAAATTGCTTCACTTACGGA 59.260 45.455 0.00 0.00 40.16 4.69
3020 3513 2.739913 TCCGAAATTGCTTCACTTACGG 59.260 45.455 0.00 0.00 39.30 4.02
3021 3514 3.424433 GGTCCGAAATTGCTTCACTTACG 60.424 47.826 0.00 0.00 33.17 3.18
3022 3515 3.424433 CGGTCCGAAATTGCTTCACTTAC 60.424 47.826 4.91 0.00 33.17 2.34
3023 3516 2.739913 CGGTCCGAAATTGCTTCACTTA 59.260 45.455 4.91 0.00 33.17 2.24
3024 3517 1.535462 CGGTCCGAAATTGCTTCACTT 59.465 47.619 4.91 0.00 33.17 3.16
3025 3518 1.156736 CGGTCCGAAATTGCTTCACT 58.843 50.000 4.91 0.00 33.17 3.41
3026 3519 0.168128 CCGGTCCGAAATTGCTTCAC 59.832 55.000 14.39 0.00 33.17 3.18
3027 3520 0.035598 TCCGGTCCGAAATTGCTTCA 59.964 50.000 14.39 0.00 33.17 3.02
3028 3521 0.727398 CTCCGGTCCGAAATTGCTTC 59.273 55.000 14.39 0.00 0.00 3.86
3029 3522 1.305930 GCTCCGGTCCGAAATTGCTT 61.306 55.000 14.39 0.00 0.00 3.91
3030 3523 1.745489 GCTCCGGTCCGAAATTGCT 60.745 57.895 14.39 0.00 0.00 3.91
3031 3524 2.038269 TGCTCCGGTCCGAAATTGC 61.038 57.895 14.39 9.60 0.00 3.56
3032 3525 0.953471 TGTGCTCCGGTCCGAAATTG 60.953 55.000 14.39 0.00 0.00 2.32
3033 3526 0.953960 GTGTGCTCCGGTCCGAAATT 60.954 55.000 14.39 0.00 0.00 1.82
3034 3527 1.375523 GTGTGCTCCGGTCCGAAAT 60.376 57.895 14.39 0.00 0.00 2.17
3035 3528 2.029964 GTGTGCTCCGGTCCGAAA 59.970 61.111 14.39 0.00 0.00 3.46
3036 3529 3.998672 GGTGTGCTCCGGTCCGAA 61.999 66.667 14.39 0.00 0.00 4.30
3037 3530 4.988716 AGGTGTGCTCCGGTCCGA 62.989 66.667 14.39 0.00 0.00 4.55
3038 3531 4.436998 GAGGTGTGCTCCGGTCCG 62.437 72.222 3.60 3.60 0.00 4.79
3039 3532 4.436998 CGAGGTGTGCTCCGGTCC 62.437 72.222 0.00 0.00 0.00 4.46
3040 3533 3.681835 ACGAGGTGTGCTCCGGTC 61.682 66.667 0.00 0.00 0.00 4.79
3041 3534 3.991051 CACGAGGTGTGCTCCGGT 61.991 66.667 0.00 0.00 42.70 5.28
3049 3542 2.831685 TTAGTTGCATCACGAGGTGT 57.168 45.000 0.00 0.00 34.79 4.16
3050 3543 5.109210 TCTAATTAGTTGCATCACGAGGTG 58.891 41.667 12.19 0.00 34.45 4.00
3051 3544 5.339008 TCTAATTAGTTGCATCACGAGGT 57.661 39.130 12.19 0.00 0.00 3.85
3052 3545 4.210120 GCTCTAATTAGTTGCATCACGAGG 59.790 45.833 20.15 0.00 0.00 4.63
3053 3546 4.805719 TGCTCTAATTAGTTGCATCACGAG 59.194 41.667 22.31 8.49 32.50 4.18
3054 3547 4.754322 TGCTCTAATTAGTTGCATCACGA 58.246 39.130 22.31 7.65 32.50 4.35
3055 3548 5.663795 ATGCTCTAATTAGTTGCATCACG 57.336 39.130 26.94 0.57 38.82 4.35
3059 3552 7.768120 GGCTATAGATGCTCTAATTAGTTGCAT 59.232 37.037 29.86 29.86 42.31 3.96
3060 3553 7.099764 GGCTATAGATGCTCTAATTAGTTGCA 58.900 38.462 25.63 25.63 37.86 4.08
3061 3554 6.254589 CGGCTATAGATGCTCTAATTAGTTGC 59.745 42.308 19.03 19.03 31.96 4.17
3062 3555 6.754209 CCGGCTATAGATGCTCTAATTAGTTG 59.246 42.308 12.19 7.87 31.96 3.16
3063 3556 6.663953 TCCGGCTATAGATGCTCTAATTAGTT 59.336 38.462 12.19 0.00 31.96 2.24
3064 3557 6.095720 GTCCGGCTATAGATGCTCTAATTAGT 59.904 42.308 12.19 0.00 31.96 2.24
3065 3558 6.320164 AGTCCGGCTATAGATGCTCTAATTAG 59.680 42.308 3.21 6.11 31.96 1.73
3066 3559 6.188407 AGTCCGGCTATAGATGCTCTAATTA 58.812 40.000 3.21 0.00 31.96 1.40
3067 3560 5.020132 AGTCCGGCTATAGATGCTCTAATT 58.980 41.667 3.21 0.00 31.96 1.40
3081 3574 2.028839 TCGAATTTGTCAAGTCCGGCTA 60.029 45.455 0.00 0.00 0.00 3.93
3093 3586 2.161609 GCGTTTGAGGGATCGAATTTGT 59.838 45.455 0.00 0.00 0.00 2.83
3099 3592 2.582436 GGGCGTTTGAGGGATCGA 59.418 61.111 0.00 0.00 0.00 3.59
3124 3617 1.940883 TATGAGGCGTGTCCGGTCAC 61.941 60.000 20.24 20.24 40.77 3.67
3132 3625 4.764823 TGAAAAAGGAAATATGAGGCGTGT 59.235 37.500 0.00 0.00 0.00 4.49
3178 3671 7.399765 TGCATGATTTTATATGGATTTAGGGGG 59.600 37.037 0.00 0.00 0.00 5.40
3252 3746 3.065510 CGACTCAGGTCATCTACGACAAT 59.934 47.826 0.00 0.00 42.21 2.71
3306 3827 2.109126 GCAACAGATGGAGACGGCC 61.109 63.158 0.00 0.00 0.00 6.13
3311 3832 2.361189 TGTCGGCAACAGATGGAGA 58.639 52.632 0.00 0.00 32.81 3.71
3329 3850 4.379243 CGGAGGCAAGGCGTCACT 62.379 66.667 12.25 0.00 44.00 3.41
3401 3922 1.215647 GCGATGGAGAAGGACGTGT 59.784 57.895 0.00 0.00 0.00 4.49
3425 3946 2.367512 ATGTGGGGGAGGAGGAGC 60.368 66.667 0.00 0.00 0.00 4.70
3464 3985 1.621672 GGAGGAGGAGCAGGAGTTGG 61.622 65.000 0.00 0.00 0.00 3.77
3466 3987 0.325203 GAGGAGGAGGAGCAGGAGTT 60.325 60.000 0.00 0.00 0.00 3.01
3467 3988 1.221213 AGAGGAGGAGGAGCAGGAGT 61.221 60.000 0.00 0.00 0.00 3.85
3468 3989 0.032217 AAGAGGAGGAGGAGCAGGAG 60.032 60.000 0.00 0.00 0.00 3.69
3505 4082 0.759060 GAGGAAGAGGAGGAGGAGCC 60.759 65.000 0.00 0.00 0.00 4.70
3506 4083 0.759060 GGAGGAAGAGGAGGAGGAGC 60.759 65.000 0.00 0.00 0.00 4.70
3507 4084 0.633921 TGGAGGAAGAGGAGGAGGAG 59.366 60.000 0.00 0.00 0.00 3.69
3508 4085 1.219213 GATGGAGGAAGAGGAGGAGGA 59.781 57.143 0.00 0.00 0.00 3.71
3509 4086 1.715785 GATGGAGGAAGAGGAGGAGG 58.284 60.000 0.00 0.00 0.00 4.30
3510 4087 1.327303 CGATGGAGGAAGAGGAGGAG 58.673 60.000 0.00 0.00 0.00 3.69
3511 4088 0.757188 GCGATGGAGGAAGAGGAGGA 60.757 60.000 0.00 0.00 0.00 3.71
3512 4089 1.745264 GCGATGGAGGAAGAGGAGG 59.255 63.158 0.00 0.00 0.00 4.30
3513 4090 1.745264 GGCGATGGAGGAAGAGGAG 59.255 63.158 0.00 0.00 0.00 3.69
3555 4141 2.008400 TCTGGAACTAGGGAGGAGGAA 58.992 52.381 0.00 0.00 0.00 3.36
3556 4142 1.288335 GTCTGGAACTAGGGAGGAGGA 59.712 57.143 0.00 0.00 0.00 3.71
3557 4143 1.783071 GTCTGGAACTAGGGAGGAGG 58.217 60.000 0.00 0.00 0.00 4.30
3558 4144 1.341187 ACGTCTGGAACTAGGGAGGAG 60.341 57.143 0.00 0.00 0.00 3.69
3565 4151 0.745468 GGGGCTACGTCTGGAACTAG 59.255 60.000 0.00 0.00 0.00 2.57
3576 4164 1.821258 GTAGGGAAGTGGGGCTACG 59.179 63.158 0.00 0.00 0.00 3.51
3604 4197 2.175202 GTCTCTTCCTCCTTGAGCAGA 58.825 52.381 0.00 0.00 0.00 4.26
3634 4227 2.582498 GCCGCTGCTACTACACGG 60.582 66.667 0.00 0.00 46.50 4.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.