Multiple sequence alignment - TraesCS4D01G017600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G017600 chr4D 100.000 3938 0 0 1 3938 7796210 7800147 0.000000e+00 7273.0
1 TraesCS4D01G017600 chr4A 90.048 1467 76 29 800 2241 595664109 595662688 0.000000e+00 1836.0
2 TraesCS4D01G017600 chr4A 87.913 786 70 15 1 779 595665157 595664390 0.000000e+00 902.0
3 TraesCS4D01G017600 chr4A 83.769 918 84 35 810 1695 595655273 595656157 0.000000e+00 809.0
4 TraesCS4D01G017600 chr4A 92.407 540 38 3 2453 2990 595661907 595661369 0.000000e+00 767.0
5 TraesCS4D01G017600 chr4A 93.521 463 30 0 2474 2936 676816889 676817351 0.000000e+00 689.0
6 TraesCS4D01G017600 chr4A 91.429 490 28 5 2451 2938 595658499 595658976 0.000000e+00 660.0
7 TraesCS4D01G017600 chr4A 82.190 612 65 19 1104 1695 676813112 676813699 1.640000e-133 486.0
8 TraesCS4D01G017600 chr4B 95.748 729 21 6 2470 3190 13998964 13998238 0.000000e+00 1166.0
9 TraesCS4D01G017600 chr4B 85.985 1056 69 29 800 1813 14001309 14000291 0.000000e+00 1057.0
10 TraesCS4D01G017600 chr4B 83.753 437 34 16 1819 2250 14000016 13999612 2.870000e-101 379.0
11 TraesCS4D01G017600 chr4B 91.216 148 11 2 3753 3899 13998012 13997866 2.400000e-47 200.0
12 TraesCS4D01G017600 chr7D 94.541 458 25 0 2477 2934 58905528 58905071 0.000000e+00 708.0
13 TraesCS4D01G017600 chr7D 83.444 604 61 15 1111 1695 58908800 58908217 3.490000e-145 525.0
14 TraesCS4D01G017600 chr7D 87.739 261 27 2 3477 3736 612933664 612933920 2.300000e-77 300.0
15 TraesCS4D01G017600 chr1D 91.473 258 19 2 3478 3732 61809962 61810219 6.260000e-93 351.0
16 TraesCS4D01G017600 chr1D 78.767 146 31 0 2481 2626 108261962 108261817 9.010000e-17 99.0
17 TraesCS4D01G017600 chr2D 88.686 274 21 5 3473 3736 404458191 404458464 3.790000e-85 326.0
18 TraesCS4D01G017600 chr2B 89.147 258 28 0 3477 3734 330580809 330581066 4.910000e-84 322.0
19 TraesCS4D01G017600 chr3B 89.683 252 25 1 3483 3733 738383721 738383972 1.770000e-83 320.0
20 TraesCS4D01G017600 chr7B 90.456 241 23 0 3492 3732 419247320 419247080 6.350000e-83 318.0
21 TraesCS4D01G017600 chr5B 88.506 261 30 0 3474 3734 442494776 442495036 2.280000e-82 316.0
22 TraesCS4D01G017600 chr6B 87.640 267 32 1 3472 3738 256672774 256673039 3.820000e-80 309.0
23 TraesCS4D01G017600 chr3D 87.594 266 31 2 3473 3737 443317568 443317832 1.370000e-79 307.0
24 TraesCS4D01G017600 chr3D 87.671 73 7 1 324 396 359520766 359520836 2.520000e-12 84.2
25 TraesCS4D01G017600 chr1B 86.316 285 28 2 3473 3747 69665134 69665417 2.300000e-77 300.0
26 TraesCS4D01G017600 chr5A 78.059 237 31 13 336 567 641595470 641595690 3.190000e-26 130.0
27 TraesCS4D01G017600 chr5A 81.301 123 18 4 336 458 59699707 59699824 1.160000e-15 95.3
28 TraesCS4D01G017600 chr1A 77.397 146 33 0 2481 2626 111153078 111152933 1.950000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G017600 chr4D 7796210 7800147 3937 False 7273.000000 7273 100.000000 1 3938 1 chr4D.!!$F1 3937
1 TraesCS4D01G017600 chr4A 595661369 595665157 3788 True 1168.333333 1836 90.122667 1 2990 3 chr4A.!!$R1 2989
2 TraesCS4D01G017600 chr4A 595655273 595658976 3703 False 734.500000 809 87.599000 810 2938 2 chr4A.!!$F1 2128
3 TraesCS4D01G017600 chr4A 676813112 676817351 4239 False 587.500000 689 87.855500 1104 2936 2 chr4A.!!$F2 1832
4 TraesCS4D01G017600 chr4B 13997866 14001309 3443 True 700.500000 1166 89.175500 800 3899 4 chr4B.!!$R1 3099
5 TraesCS4D01G017600 chr7D 58905071 58908800 3729 True 616.500000 708 88.992500 1111 2934 2 chr7D.!!$R1 1823

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
242 247 0.033208 TGATGAAATGAGGGGTGGCC 60.033 55.0 0.0 0.0 0.0 5.36 F
1974 7416 0.172803 ATTCGTCTCAGTGCCGTACC 59.827 55.0 0.0 0.0 0.0 3.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2216 7955 0.585357 GCTACATGCATGAAGCCTCG 59.415 55.0 32.75 7.50 44.83 4.63 R
3711 10505 0.038310 GGCTGTTTGGTTCTAGGCCT 59.962 55.0 11.78 11.78 35.73 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 26 1.768275 TGTGACAAGGAAGAGAAGCCA 59.232 47.619 0.00 0.00 0.00 4.75
32 34 1.569708 GAAGAGAAGCCAGAGATGCG 58.430 55.000 0.00 0.00 0.00 4.73
51 53 2.595463 CCCGCCGCCAATGATCAT 60.595 61.111 1.18 1.18 0.00 2.45
67 69 0.621280 TCATGAGGCCAGTCCATCCA 60.621 55.000 5.01 0.00 37.29 3.41
74 76 2.821366 CAGTCCATCCAGCACGGC 60.821 66.667 0.00 0.00 33.14 5.68
96 98 4.331168 GCAGTCATCTACATCTCCAACAAC 59.669 45.833 0.00 0.00 0.00 3.32
108 110 5.624344 TCTCCAACAACGAGTAGAAGTAG 57.376 43.478 0.00 0.00 0.00 2.57
110 112 5.411977 TCTCCAACAACGAGTAGAAGTAGAG 59.588 44.000 0.00 0.00 0.00 2.43
116 118 7.131498 ACAACGAGTAGAAGTAGAGTAGTTG 57.869 40.000 0.00 0.00 37.52 3.16
130 132 6.487689 AGAGTAGTTGCTTTCAAATGTAGC 57.512 37.500 0.00 0.00 33.37 3.58
157 159 8.281194 TCGTTTGATCTAGTACGTAGATGAATC 58.719 37.037 15.34 12.18 46.84 2.52
164 166 7.455891 TCTAGTACGTAGATGAATCCCACATA 58.544 38.462 0.00 0.00 32.36 2.29
190 192 6.712095 ACATGCATGGTGTAGTATGGAAATAG 59.288 38.462 29.41 0.00 0.00 1.73
223 225 1.001378 GAGGATTGTGCTTGCAACGTT 60.001 47.619 0.00 0.00 0.00 3.99
239 244 2.436417 ACGTTGATGAAATGAGGGGTG 58.564 47.619 0.00 0.00 0.00 4.61
240 245 1.745087 CGTTGATGAAATGAGGGGTGG 59.255 52.381 0.00 0.00 0.00 4.61
242 247 0.033208 TGATGAAATGAGGGGTGGCC 60.033 55.000 0.00 0.00 0.00 5.36
250 255 4.024984 AGGGGTGGCCTGCTCCTA 62.025 66.667 16.27 0.00 0.00 2.94
252 257 2.386935 GGGGTGGCCTGCTCCTATT 61.387 63.158 3.32 0.00 0.00 1.73
261 266 1.952296 CCTGCTCCTATTTGTGGATGC 59.048 52.381 0.00 0.00 32.56 3.91
264 269 0.947244 CTCCTATTTGTGGATGCGCC 59.053 55.000 4.18 0.00 32.56 6.53
267 272 1.785041 CTATTTGTGGATGCGCCCGG 61.785 60.000 4.18 0.00 34.97 5.73
307 312 0.676782 GGTCGGATTGAGGGTTGTGG 60.677 60.000 0.00 0.00 0.00 4.17
310 315 0.881118 CGGATTGAGGGTTGTGGTTG 59.119 55.000 0.00 0.00 0.00 3.77
317 322 2.976185 TGAGGGTTGTGGTTGTAGATGA 59.024 45.455 0.00 0.00 0.00 2.92
320 325 3.016736 GGGTTGTGGTTGTAGATGATGG 58.983 50.000 0.00 0.00 0.00 3.51
321 326 2.423538 GGTTGTGGTTGTAGATGATGGC 59.576 50.000 0.00 0.00 0.00 4.40
325 330 2.939103 GTGGTTGTAGATGATGGCTGAC 59.061 50.000 0.00 0.00 0.00 3.51
329 334 5.838521 TGGTTGTAGATGATGGCTGACTATA 59.161 40.000 0.00 0.00 0.00 1.31
333 338 6.314917 TGTAGATGATGGCTGACTATAAGGA 58.685 40.000 0.00 0.00 0.00 3.36
334 339 6.782494 TGTAGATGATGGCTGACTATAAGGAA 59.218 38.462 0.00 0.00 0.00 3.36
340 345 6.328934 TGATGGCTGACTATAAGGAAATACCA 59.671 38.462 0.00 0.00 42.04 3.25
341 346 5.925509 TGGCTGACTATAAGGAAATACCAC 58.074 41.667 0.00 0.00 42.04 4.16
342 347 5.163237 TGGCTGACTATAAGGAAATACCACC 60.163 44.000 0.00 0.00 42.04 4.61
343 348 5.163237 GGCTGACTATAAGGAAATACCACCA 60.163 44.000 0.00 0.00 42.04 4.17
344 349 5.758784 GCTGACTATAAGGAAATACCACCAC 59.241 44.000 0.00 0.00 42.04 4.16
345 350 6.408206 GCTGACTATAAGGAAATACCACCACT 60.408 42.308 0.00 0.00 42.04 4.00
346 351 7.504926 TGACTATAAGGAAATACCACCACTT 57.495 36.000 0.00 0.00 42.04 3.16
361 366 2.511218 ACCACTTGTATGCTCCCATGAT 59.489 45.455 0.00 0.00 32.85 2.45
405 410 8.175069 TCAAATTTAGATGTTTCGGAGATTTCG 58.825 33.333 0.00 0.00 35.04 3.46
563 571 8.480643 AACAAGAATAGTGTCATAAGCTACAC 57.519 34.615 9.09 9.09 45.06 2.90
581 589 6.942576 AGCTACACTATTCACATCCAGTTTTT 59.057 34.615 0.00 0.00 0.00 1.94
654 662 3.134081 GGGCCTGTACTGTACACATATGT 59.866 47.826 16.26 1.41 43.30 2.29
672 680 7.595875 CACATATGTGTTGTCAACATTCACATT 59.404 33.333 24.91 16.34 42.80 2.71
676 684 7.058298 TGTGTTGTCAACATTCACATTTTTG 57.942 32.000 20.86 0.00 44.35 2.44
678 686 7.172190 TGTGTTGTCAACATTCACATTTTTGTT 59.828 29.630 20.86 0.00 44.35 2.83
679 687 7.478044 GTGTTGTCAACATTCACATTTTTGTTG 59.522 33.333 20.86 8.03 46.43 3.33
695 703 9.007901 CATTTTTGTTGGGAATATTTTAAGCCA 57.992 29.630 0.00 0.00 0.00 4.75
718 726 9.727627 GCCATTTAAACAACATTTTCAAATTGA 57.272 25.926 0.00 0.00 0.00 2.57
744 752 1.602165 CGGGAGTATACACGTGATGGC 60.602 57.143 25.01 9.54 31.63 4.40
765 773 4.040217 GGCATCACCTGATATTCTCTCTGT 59.960 45.833 0.00 0.00 32.63 3.41
773 781 6.434028 ACCTGATATTCTCTCTGTAGATGCTC 59.566 42.308 0.00 0.00 0.00 4.26
779 787 5.381184 TCTCTCTGTAGATGCTCTTAGGT 57.619 43.478 0.00 0.00 0.00 3.08
780 788 6.502074 TCTCTCTGTAGATGCTCTTAGGTA 57.498 41.667 0.00 0.00 0.00 3.08
783 791 8.001875 TCTCTCTGTAGATGCTCTTAGGTAATT 58.998 37.037 0.00 0.00 0.00 1.40
784 792 9.290988 CTCTCTGTAGATGCTCTTAGGTAATTA 57.709 37.037 0.00 0.00 0.00 1.40
879 1159 6.352222 CCAAACTCTATATAATCCCGCCATCT 60.352 42.308 0.00 0.00 0.00 2.90
880 1160 7.147724 CCAAACTCTATATAATCCCGCCATCTA 60.148 40.741 0.00 0.00 0.00 1.98
921 1207 5.877012 ACACTACTCACCATCATCAATCAAC 59.123 40.000 0.00 0.00 0.00 3.18
923 1209 3.273434 ACTCACCATCATCAATCAACCG 58.727 45.455 0.00 0.00 0.00 4.44
995 1290 4.006319 CACCAAAAGTCAAGAGGAGATCC 58.994 47.826 0.00 0.00 0.00 3.36
1191 1495 1.895707 CAAGCTCATCGGCATCCCC 60.896 63.158 0.00 0.00 34.17 4.81
1347 1651 4.436998 CACGTGCTCCCGGACTCC 62.437 72.222 0.73 0.00 0.00 3.85
1713 2118 2.625823 CCAATTCCCGCTTGCACGT 61.626 57.895 0.00 0.00 0.00 4.49
1892 5333 1.583054 GCCTCGTTGACTTTGTGTCT 58.417 50.000 0.00 0.00 45.54 3.41
1900 5341 4.035091 CGTTGACTTTGTGTCTCATGGAAA 59.965 41.667 0.00 0.00 45.54 3.13
1901 5342 5.514279 GTTGACTTTGTGTCTCATGGAAAG 58.486 41.667 0.00 0.00 45.54 2.62
1902 5343 5.034852 TGACTTTGTGTCTCATGGAAAGA 57.965 39.130 0.00 0.00 45.54 2.52
1909 7347 9.605275 CTTTGTGTCTCATGGAAAGATAGATAA 57.395 33.333 0.00 0.00 0.00 1.75
1974 7416 0.172803 ATTCGTCTCAGTGCCGTACC 59.827 55.000 0.00 0.00 0.00 3.34
2028 7474 3.887868 CAAACATAGCGGCCGGCC 61.888 66.667 36.69 36.69 45.17 6.13
2030 7476 2.737881 AAACATAGCGGCCGGCCTA 61.738 57.895 41.01 28.65 45.17 3.93
2031 7477 2.260088 AAACATAGCGGCCGGCCTAA 62.260 55.000 41.01 26.68 45.17 2.69
2034 7480 3.296709 ATAGCGGCCGGCCTAATCG 62.297 63.158 41.01 28.42 45.17 3.34
2037 7483 4.963428 CGGCCGGCCTAATCGTCC 62.963 72.222 41.01 13.75 0.00 4.79
2056 7502 7.649533 TCGTCCTCCATTAATTTGTCTAGTA 57.350 36.000 0.00 0.00 0.00 1.82
2058 7504 8.195436 TCGTCCTCCATTAATTTGTCTAGTAAG 58.805 37.037 0.00 0.00 0.00 2.34
2062 7508 9.262358 CCTCCATTAATTTGTCTAGTAAGCTAC 57.738 37.037 0.00 0.00 0.00 3.58
2063 7509 9.262358 CTCCATTAATTTGTCTAGTAAGCTACC 57.738 37.037 0.00 0.00 0.00 3.18
2064 7510 8.989131 TCCATTAATTTGTCTAGTAAGCTACCT 58.011 33.333 0.00 0.00 0.00 3.08
2162 7889 3.627123 AGTTTGCCAAAAACAATCAAGCC 59.373 39.130 0.00 0.00 32.81 4.35
2216 7955 2.169978 ACTTCCCGAATGGCTACTAACC 59.830 50.000 0.00 0.00 0.00 2.85
2238 7977 3.065655 GAGGCTTCATGCATGTAGCTAG 58.934 50.000 39.66 24.53 46.39 3.42
2241 7980 2.877168 GCTTCATGCATGTAGCTAGCTT 59.123 45.455 36.83 1.07 44.58 3.74
2242 7981 4.060900 GCTTCATGCATGTAGCTAGCTTA 58.939 43.478 36.83 13.21 44.58 3.09
2243 7982 4.512944 GCTTCATGCATGTAGCTAGCTTAA 59.487 41.667 36.83 17.14 44.58 1.85
2244 7983 5.008019 GCTTCATGCATGTAGCTAGCTTAAA 59.992 40.000 36.83 16.71 44.58 1.52
2259 8301 6.598064 GCTAGCTTAAATTAGTCCTGGTTTCA 59.402 38.462 7.70 0.00 0.00 2.69
2272 8314 7.602753 AGTCCTGGTTTCACTAAAATTATTGC 58.397 34.615 0.00 0.00 0.00 3.56
2288 8330 9.853555 AAAATTATTGCGAATTGTGACTTATGA 57.146 25.926 0.00 0.00 0.00 2.15
2290 8332 7.609760 TTATTGCGAATTGTGACTTATGACT 57.390 32.000 0.00 0.00 0.00 3.41
2292 8334 5.940192 TGCGAATTGTGACTTATGACTTT 57.060 34.783 0.00 0.00 0.00 2.66
2294 8336 5.700832 TGCGAATTGTGACTTATGACTTTCT 59.299 36.000 0.00 0.00 0.00 2.52
2297 8339 7.230222 CGAATTGTGACTTATGACTTTCTGAC 58.770 38.462 0.00 0.00 0.00 3.51
2299 8341 8.682936 AATTGTGACTTATGACTTTCTGACTT 57.317 30.769 0.00 0.00 0.00 3.01
2300 8342 7.482654 TTGTGACTTATGACTTTCTGACTTG 57.517 36.000 0.00 0.00 0.00 3.16
2302 8344 7.722363 TGTGACTTATGACTTTCTGACTTGTA 58.278 34.615 0.00 0.00 0.00 2.41
2303 8345 7.867909 TGTGACTTATGACTTTCTGACTTGTAG 59.132 37.037 0.00 0.00 0.00 2.74
2306 8348 9.262358 GACTTATGACTTTCTGACTTGTAGTTT 57.738 33.333 0.00 0.00 0.00 2.66
2307 8349 9.262358 ACTTATGACTTTCTGACTTGTAGTTTC 57.738 33.333 0.00 0.00 0.00 2.78
2308 8350 9.261180 CTTATGACTTTCTGACTTGTAGTTTCA 57.739 33.333 0.00 0.00 0.00 2.69
2311 8353 7.974675 TGACTTTCTGACTTGTAGTTTCAAAG 58.025 34.615 0.00 0.00 0.00 2.77
2314 8356 9.444600 ACTTTCTGACTTGTAGTTTCAAAGTAA 57.555 29.630 0.00 0.00 32.96 2.24
2317 8359 9.444600 TTCTGACTTGTAGTTTCAAAGTAAAGT 57.555 29.630 10.12 10.12 0.00 2.66
2318 8360 9.444600 TCTGACTTGTAGTTTCAAAGTAAAGTT 57.555 29.630 11.01 1.47 0.00 2.66
2320 8362 9.834628 TGACTTGTAGTTTCAAAGTAAAGTTTG 57.165 29.630 0.00 4.24 38.55 2.93
2321 8363 9.836076 GACTTGTAGTTTCAAAGTAAAGTTTGT 57.164 29.630 9.48 0.00 38.38 2.83
2322 8364 9.620660 ACTTGTAGTTTCAAAGTAAAGTTTGTG 57.379 29.630 9.48 0.00 38.38 3.33
2323 8365 9.834628 CTTGTAGTTTCAAAGTAAAGTTTGTGA 57.165 29.630 9.48 0.00 38.38 3.58
2328 8370 9.705290 AGTTTCAAAGTAAAGTTTGTGAAATGT 57.295 25.926 15.51 8.45 37.33 2.71
2331 8373 8.682128 TCAAAGTAAAGTTTGTGAAATGTGAC 57.318 30.769 9.48 0.00 38.38 3.67
2332 8374 7.757624 TCAAAGTAAAGTTTGTGAAATGTGACC 59.242 33.333 9.48 0.00 38.38 4.02
2333 8375 7.404671 AAGTAAAGTTTGTGAAATGTGACCT 57.595 32.000 0.00 0.00 0.00 3.85
2334 8376 7.404671 AGTAAAGTTTGTGAAATGTGACCTT 57.595 32.000 0.00 0.00 0.00 3.50
2336 8378 6.530019 AAAGTTTGTGAAATGTGACCTTCT 57.470 33.333 0.00 0.00 0.00 2.85
2337 8379 5.505173 AGTTTGTGAAATGTGACCTTCTG 57.495 39.130 0.00 0.00 0.00 3.02
2338 8380 5.192927 AGTTTGTGAAATGTGACCTTCTGA 58.807 37.500 0.00 0.00 0.00 3.27
2344 8386 3.708403 AATGTGACCTTCTGAGCATGA 57.292 42.857 0.00 0.00 0.00 3.07
2350 8392 3.773667 TGACCTTCTGAGCATGAGAATCT 59.226 43.478 0.00 0.00 37.79 2.40
2372 8478 0.110238 TTTGAAAGAGACGCATGCGC 60.110 50.000 38.15 28.98 44.19 6.09
2377 8724 1.586422 AAGAGACGCATGCGCATATT 58.414 45.000 38.15 26.25 44.19 1.28
2395 8742 7.844653 GCGCATATTAAGACAACTACAAGTTAC 59.155 37.037 0.30 0.00 36.03 2.50
2426 8863 8.840833 TTATGAAGTGATTACAAGTTGCTACA 57.159 30.769 1.81 0.00 0.00 2.74
2434 8871 8.230486 GTGATTACAAGTTGCTACATATATGGC 58.770 37.037 16.96 11.57 0.00 4.40
2435 8872 6.779115 TTACAAGTTGCTACATATATGGCG 57.221 37.500 16.96 8.17 0.00 5.69
2437 8874 5.364778 ACAAGTTGCTACATATATGGCGAA 58.635 37.500 16.96 6.30 0.00 4.70
2438 8875 5.820423 ACAAGTTGCTACATATATGGCGAAA 59.180 36.000 16.96 5.42 0.00 3.46
2439 8876 6.317642 ACAAGTTGCTACATATATGGCGAAAA 59.682 34.615 16.96 2.51 0.00 2.29
2440 8877 6.935741 AGTTGCTACATATATGGCGAAAAA 57.064 33.333 16.96 1.55 0.00 1.94
2634 9421 4.891037 GGCTGCATCCTCCAGGCC 62.891 72.222 0.50 0.00 46.59 5.19
2987 9775 2.994995 TCCAGGCGTGTCCATCGT 60.995 61.111 5.57 0.00 37.29 3.73
3001 9789 0.039256 CATCGTGCACCCCAACTTTG 60.039 55.000 12.15 0.00 0.00 2.77
3012 9800 4.021192 CACCCCAACTTTGCTTTATGATGT 60.021 41.667 0.00 0.00 0.00 3.06
3079 9872 4.821805 GCATTGCTCTCTAGTCTCTAGAGT 59.178 45.833 24.04 3.88 41.26 3.24
3097 9890 9.458374 CTCTAGAGTAGTAATTAAGCTTGCTTC 57.542 37.037 9.86 0.00 0.00 3.86
3113 9906 2.100418 TGCTTCATCGATCACTCTCAGG 59.900 50.000 0.00 0.00 0.00 3.86
3128 9921 2.943690 TCTCAGGTAGCATCTCACGTAC 59.056 50.000 0.00 0.00 0.00 3.67
3129 9922 1.669265 TCAGGTAGCATCTCACGTACG 59.331 52.381 15.01 15.01 0.00 3.67
3130 9923 1.400846 CAGGTAGCATCTCACGTACGT 59.599 52.381 16.72 16.72 0.00 3.57
3131 9924 2.089980 AGGTAGCATCTCACGTACGTT 58.910 47.619 20.23 4.82 0.00 3.99
3132 9925 2.097142 AGGTAGCATCTCACGTACGTTC 59.903 50.000 20.23 3.97 0.00 3.95
3147 9941 5.528690 ACGTACGTTCTAGCAATCCTATGTA 59.471 40.000 16.72 0.00 0.00 2.29
3152 9946 6.265649 ACGTTCTAGCAATCCTATGTAGATGT 59.734 38.462 0.00 0.00 0.00 3.06
3158 9952 4.202357 GCAATCCTATGTAGATGTCCACCA 60.202 45.833 0.00 0.00 0.00 4.17
3192 9986 8.578308 GTACTGTTGTACTATGTGTGTGTAAA 57.422 34.615 0.00 0.00 44.08 2.01
3193 9987 9.033481 GTACTGTTGTACTATGTGTGTGTAAAA 57.967 33.333 0.00 0.00 44.08 1.52
3194 9988 8.671384 ACTGTTGTACTATGTGTGTGTAAAAT 57.329 30.769 0.00 0.00 0.00 1.82
3195 9989 8.556194 ACTGTTGTACTATGTGTGTGTAAAATG 58.444 33.333 0.00 0.00 0.00 2.32
3196 9990 8.439993 TGTTGTACTATGTGTGTGTAAAATGT 57.560 30.769 0.00 0.00 0.00 2.71
3197 9991 8.552865 TGTTGTACTATGTGTGTGTAAAATGTC 58.447 33.333 0.00 0.00 0.00 3.06
3198 9992 8.552865 GTTGTACTATGTGTGTGTAAAATGTCA 58.447 33.333 0.00 0.00 0.00 3.58
3199 9993 8.840833 TGTACTATGTGTGTGTAAAATGTCAT 57.159 30.769 0.00 0.00 0.00 3.06
3200 9994 8.716909 TGTACTATGTGTGTGTAAAATGTCATG 58.283 33.333 0.00 0.00 0.00 3.07
3201 9995 6.611381 ACTATGTGTGTGTAAAATGTCATGC 58.389 36.000 0.00 0.00 0.00 4.06
3202 9996 5.710513 ATGTGTGTGTAAAATGTCATGCT 57.289 34.783 0.00 0.00 0.00 3.79
3203 9997 5.512753 TGTGTGTGTAAAATGTCATGCTT 57.487 34.783 0.00 0.00 0.00 3.91
3204 9998 5.900425 TGTGTGTGTAAAATGTCATGCTTT 58.100 33.333 0.00 0.00 0.00 3.51
3205 9999 6.336566 TGTGTGTGTAAAATGTCATGCTTTT 58.663 32.000 0.00 0.00 0.00 2.27
3206 10000 6.475076 TGTGTGTGTAAAATGTCATGCTTTTC 59.525 34.615 4.44 0.00 0.00 2.29
3207 10001 6.697019 GTGTGTGTAAAATGTCATGCTTTTCT 59.303 34.615 4.44 0.00 0.00 2.52
3208 10002 6.696583 TGTGTGTAAAATGTCATGCTTTTCTG 59.303 34.615 4.44 0.00 0.00 3.02
3209 10003 6.144402 GTGTGTAAAATGTCATGCTTTTCTGG 59.856 38.462 4.44 0.00 0.00 3.86
3210 10004 5.119125 GTGTAAAATGTCATGCTTTTCTGGC 59.881 40.000 4.44 0.00 0.00 4.85
3211 10005 3.323751 AAATGTCATGCTTTTCTGGCC 57.676 42.857 0.00 0.00 0.00 5.36
3212 10006 1.927487 ATGTCATGCTTTTCTGGCCA 58.073 45.000 4.71 4.71 0.00 5.36
3213 10007 1.927487 TGTCATGCTTTTCTGGCCAT 58.073 45.000 5.51 0.00 0.00 4.40
3214 10008 1.546923 TGTCATGCTTTTCTGGCCATG 59.453 47.619 5.51 0.00 0.00 3.66
3215 10009 1.547372 GTCATGCTTTTCTGGCCATGT 59.453 47.619 5.51 0.00 0.00 3.21
3216 10010 2.028748 GTCATGCTTTTCTGGCCATGTT 60.029 45.455 5.51 0.00 0.00 2.71
3217 10011 3.193267 GTCATGCTTTTCTGGCCATGTTA 59.807 43.478 5.51 0.00 0.00 2.41
3218 10012 3.831333 TCATGCTTTTCTGGCCATGTTAA 59.169 39.130 5.51 0.00 0.00 2.01
3219 10013 3.658757 TGCTTTTCTGGCCATGTTAAC 57.341 42.857 5.51 0.00 0.00 2.01
3220 10014 3.230134 TGCTTTTCTGGCCATGTTAACT 58.770 40.909 5.51 0.00 0.00 2.24
3221 10015 3.005684 TGCTTTTCTGGCCATGTTAACTG 59.994 43.478 5.51 2.92 0.00 3.16
3222 10016 3.614870 GCTTTTCTGGCCATGTTAACTGG 60.615 47.826 5.51 15.70 36.81 4.00
3223 10017 2.214376 TTCTGGCCATGTTAACTGGG 57.786 50.000 5.51 15.39 34.16 4.45
3224 10018 1.072266 TCTGGCCATGTTAACTGGGT 58.928 50.000 5.51 0.00 34.16 4.51
3245 10039 5.151389 GGTTGTCGTGTCAAATTATGTTCC 58.849 41.667 0.00 0.00 0.00 3.62
3246 10040 5.048991 GGTTGTCGTGTCAAATTATGTTCCT 60.049 40.000 0.00 0.00 0.00 3.36
3247 10041 6.435428 GTTGTCGTGTCAAATTATGTTCCTT 58.565 36.000 0.00 0.00 0.00 3.36
3248 10042 6.627395 TGTCGTGTCAAATTATGTTCCTTT 57.373 33.333 0.00 0.00 0.00 3.11
3249 10043 6.664515 TGTCGTGTCAAATTATGTTCCTTTC 58.335 36.000 0.00 0.00 0.00 2.62
3250 10044 6.084277 GTCGTGTCAAATTATGTTCCTTTCC 58.916 40.000 0.00 0.00 0.00 3.13
3285 10079 4.641094 TGTTGAAAGGGAAGCGTCTTTTAA 59.359 37.500 0.00 0.00 33.85 1.52
3290 10084 5.784578 AAGGGAAGCGTCTTTTAATGTTT 57.215 34.783 0.00 0.00 0.00 2.83
3294 10088 6.657541 AGGGAAGCGTCTTTTAATGTTTGATA 59.342 34.615 0.00 0.00 0.00 2.15
3332 10126 1.609555 GATACCCAGCGTCTACTCCTG 59.390 57.143 0.00 0.00 0.00 3.86
3335 10129 0.394488 CCCAGCGTCTACTCCTGAGA 60.394 60.000 0.22 0.00 0.00 3.27
3382 10176 6.525121 TCACTAAAAATCTGAGTGAACACG 57.475 37.500 1.59 0.00 44.97 4.49
3391 10185 3.319689 TCTGAGTGAACACGTTGGATGTA 59.680 43.478 0.00 0.00 36.20 2.29
3403 10197 4.154195 ACGTTGGATGTAGTTGAATCAAGC 59.846 41.667 0.00 0.00 0.00 4.01
3410 10204 6.480320 GGATGTAGTTGAATCAAGCGAACTAT 59.520 38.462 0.00 0.00 34.35 2.12
3446 10240 1.226379 GGTCGATTTGCATGCACGG 60.226 57.895 22.58 9.95 0.00 4.94
3467 10261 3.131046 GGATCTCAATGCGGGAATTGTTT 59.869 43.478 0.00 0.00 38.46 2.83
3468 10262 3.848272 TCTCAATGCGGGAATTGTTTC 57.152 42.857 0.00 0.00 38.46 2.78
3469 10263 3.153130 TCTCAATGCGGGAATTGTTTCA 58.847 40.909 0.00 0.00 38.46 2.69
3470 10264 3.571828 TCTCAATGCGGGAATTGTTTCAA 59.428 39.130 0.00 0.00 38.46 2.69
3471 10265 4.038522 TCTCAATGCGGGAATTGTTTCAAA 59.961 37.500 0.00 0.00 38.46 2.69
3472 10266 4.697514 TCAATGCGGGAATTGTTTCAAAA 58.302 34.783 0.00 0.00 38.46 2.44
3473 10267 4.509600 TCAATGCGGGAATTGTTTCAAAAC 59.490 37.500 0.00 0.00 38.46 2.43
3474 10268 3.810310 TGCGGGAATTGTTTCAAAACT 57.190 38.095 7.12 0.00 39.59 2.66
3475 10269 4.920640 TGCGGGAATTGTTTCAAAACTA 57.079 36.364 7.12 0.17 39.59 2.24
3476 10270 5.263968 TGCGGGAATTGTTTCAAAACTAA 57.736 34.783 7.12 1.36 39.59 2.24
3477 10271 5.285651 TGCGGGAATTGTTTCAAAACTAAG 58.714 37.500 7.12 0.00 39.59 2.18
3478 10272 4.684242 GCGGGAATTGTTTCAAAACTAAGG 59.316 41.667 7.12 0.00 39.59 2.69
3479 10273 5.227152 CGGGAATTGTTTCAAAACTAAGGG 58.773 41.667 7.12 0.00 39.59 3.95
3480 10274 5.547465 GGGAATTGTTTCAAAACTAAGGGG 58.453 41.667 7.12 0.00 39.59 4.79
3481 10275 5.071250 GGGAATTGTTTCAAAACTAAGGGGT 59.929 40.000 7.12 0.00 39.59 4.95
3482 10276 6.408776 GGGAATTGTTTCAAAACTAAGGGGTT 60.409 38.462 7.12 0.00 39.59 4.11
3483 10277 6.481976 GGAATTGTTTCAAAACTAAGGGGTTG 59.518 38.462 7.12 0.00 39.59 3.77
3484 10278 6.553953 ATTGTTTCAAAACTAAGGGGTTGT 57.446 33.333 7.12 0.00 39.59 3.32
3485 10279 6.361768 TTGTTTCAAAACTAAGGGGTTGTT 57.638 33.333 7.12 0.00 39.59 2.83
3486 10280 6.361768 TGTTTCAAAACTAAGGGGTTGTTT 57.638 33.333 7.12 0.00 39.59 2.83
3487 10281 6.166982 TGTTTCAAAACTAAGGGGTTGTTTG 58.833 36.000 7.12 0.00 39.59 2.93
3488 10282 5.346181 TTCAAAACTAAGGGGTTGTTTGG 57.654 39.130 0.00 0.00 34.63 3.28
3489 10283 4.354662 TCAAAACTAAGGGGTTGTTTGGT 58.645 39.130 0.00 0.00 34.63 3.67
3490 10284 4.778427 TCAAAACTAAGGGGTTGTTTGGTT 59.222 37.500 0.00 0.00 34.63 3.67
3491 10285 5.248705 TCAAAACTAAGGGGTTGTTTGGTTT 59.751 36.000 0.00 0.00 38.91 3.27
3492 10286 4.746535 AACTAAGGGGTTGTTTGGTTTG 57.253 40.909 0.00 0.00 0.00 2.93
3493 10287 3.715287 ACTAAGGGGTTGTTTGGTTTGT 58.285 40.909 0.00 0.00 0.00 2.83
3494 10288 3.449377 ACTAAGGGGTTGTTTGGTTTGTG 59.551 43.478 0.00 0.00 0.00 3.33
3495 10289 2.239681 AGGGGTTGTTTGGTTTGTGA 57.760 45.000 0.00 0.00 0.00 3.58
3496 10290 2.758130 AGGGGTTGTTTGGTTTGTGAT 58.242 42.857 0.00 0.00 0.00 3.06
3497 10291 2.698274 AGGGGTTGTTTGGTTTGTGATC 59.302 45.455 0.00 0.00 0.00 2.92
3498 10292 2.432510 GGGGTTGTTTGGTTTGTGATCA 59.567 45.455 0.00 0.00 0.00 2.92
3499 10293 3.118592 GGGGTTGTTTGGTTTGTGATCAA 60.119 43.478 0.00 0.00 0.00 2.57
3500 10294 3.868661 GGGTTGTTTGGTTTGTGATCAAC 59.131 43.478 0.00 0.00 32.93 3.18
3501 10295 4.382577 GGGTTGTTTGGTTTGTGATCAACT 60.383 41.667 0.00 0.00 35.53 3.16
3502 10296 5.175127 GGTTGTTTGGTTTGTGATCAACTT 58.825 37.500 0.00 0.00 35.53 2.66
3503 10297 5.641636 GGTTGTTTGGTTTGTGATCAACTTT 59.358 36.000 0.00 0.00 35.53 2.66
3504 10298 6.402011 GGTTGTTTGGTTTGTGATCAACTTTG 60.402 38.462 0.00 0.00 35.53 2.77
3505 10299 4.629200 TGTTTGGTTTGTGATCAACTTTGC 59.371 37.500 0.00 0.00 32.93 3.68
3506 10300 3.451141 TGGTTTGTGATCAACTTTGCC 57.549 42.857 0.00 0.00 32.93 4.52
3507 10301 2.762887 TGGTTTGTGATCAACTTTGCCA 59.237 40.909 0.00 0.00 32.93 4.92
3508 10302 3.196469 TGGTTTGTGATCAACTTTGCCAA 59.804 39.130 0.00 0.00 32.93 4.52
3509 10303 4.187694 GGTTTGTGATCAACTTTGCCAAA 58.812 39.130 0.00 0.00 32.93 3.28
3510 10304 4.270808 GGTTTGTGATCAACTTTGCCAAAG 59.729 41.667 15.47 15.47 44.10 2.77
3511 10305 3.731652 TGTGATCAACTTTGCCAAAGG 57.268 42.857 20.55 4.77 42.82 3.11
3512 10306 3.030291 TGTGATCAACTTTGCCAAAGGT 58.970 40.909 20.55 12.23 42.82 3.50
3513 10307 3.450457 TGTGATCAACTTTGCCAAAGGTT 59.550 39.130 20.55 9.95 42.82 3.50
3514 10308 4.646945 TGTGATCAACTTTGCCAAAGGTTA 59.353 37.500 20.55 6.85 42.82 2.85
3515 10309 4.982295 GTGATCAACTTTGCCAAAGGTTAC 59.018 41.667 20.55 8.68 42.82 2.50
3516 10310 4.038642 TGATCAACTTTGCCAAAGGTTACC 59.961 41.667 20.55 0.00 42.82 2.85
3517 10311 3.366396 TCAACTTTGCCAAAGGTTACCA 58.634 40.909 20.55 0.00 42.82 3.25
3518 10312 3.131400 TCAACTTTGCCAAAGGTTACCAC 59.869 43.478 20.55 0.00 42.82 4.16
3519 10313 2.741145 ACTTTGCCAAAGGTTACCACA 58.259 42.857 20.55 0.00 42.82 4.17
3520 10314 2.429250 ACTTTGCCAAAGGTTACCACAC 59.571 45.455 20.55 0.00 42.82 3.82
3521 10315 1.404843 TTGCCAAAGGTTACCACACC 58.595 50.000 3.51 0.00 37.04 4.16
3545 10339 8.926715 CCTAAGGTTAGGCAAATTTAATCAAC 57.073 34.615 2.80 0.00 43.43 3.18
3546 10340 8.749354 CCTAAGGTTAGGCAAATTTAATCAACT 58.251 33.333 2.80 0.00 43.43 3.16
3550 10344 9.528489 AGGTTAGGCAAATTTAATCAACTTAGA 57.472 29.630 0.00 0.00 0.00 2.10
3555 10349 9.247861 AGGCAAATTTAATCAACTTAGATGAGT 57.752 29.630 0.00 0.00 0.00 3.41
3556 10350 9.294030 GGCAAATTTAATCAACTTAGATGAGTG 57.706 33.333 2.82 0.00 0.00 3.51
3557 10351 9.846248 GCAAATTTAATCAACTTAGATGAGTGT 57.154 29.630 2.82 0.00 0.00 3.55
3562 10356 8.918202 TTAATCAACTTAGATGAGTGTTTGGT 57.082 30.769 2.82 0.00 0.00 3.67
3563 10357 7.823745 AATCAACTTAGATGAGTGTTTGGTT 57.176 32.000 0.00 0.00 0.00 3.67
3564 10358 6.861065 TCAACTTAGATGAGTGTTTGGTTC 57.139 37.500 0.00 0.00 0.00 3.62
3565 10359 6.353323 TCAACTTAGATGAGTGTTTGGTTCA 58.647 36.000 0.00 0.00 0.00 3.18
3566 10360 6.826231 TCAACTTAGATGAGTGTTTGGTTCAA 59.174 34.615 0.00 0.00 0.00 2.69
3567 10361 6.867662 ACTTAGATGAGTGTTTGGTTCAAG 57.132 37.500 0.00 0.00 0.00 3.02
3568 10362 5.239525 ACTTAGATGAGTGTTTGGTTCAAGC 59.760 40.000 0.00 0.00 0.00 4.01
3569 10363 2.887152 AGATGAGTGTTTGGTTCAAGCC 59.113 45.455 0.00 0.00 0.00 4.35
3570 10364 2.136298 TGAGTGTTTGGTTCAAGCCA 57.864 45.000 0.00 0.00 36.62 4.75
3571 10365 1.748493 TGAGTGTTTGGTTCAAGCCAC 59.252 47.619 0.00 0.00 38.42 5.01
3572 10366 1.748493 GAGTGTTTGGTTCAAGCCACA 59.252 47.619 11.95 0.00 38.42 4.17
3573 10367 1.476488 AGTGTTTGGTTCAAGCCACAC 59.524 47.619 10.00 10.00 39.10 3.82
3574 10368 0.820871 TGTTTGGTTCAAGCCACACC 59.179 50.000 0.54 0.00 38.17 4.16
3575 10369 1.111277 GTTTGGTTCAAGCCACACCT 58.889 50.000 0.00 0.00 38.42 4.00
3576 10370 1.480545 GTTTGGTTCAAGCCACACCTT 59.519 47.619 0.00 0.00 38.42 3.50
3577 10371 2.691011 GTTTGGTTCAAGCCACACCTTA 59.309 45.455 0.00 0.00 38.42 2.69
3578 10372 2.738587 TGGTTCAAGCCACACCTTAA 57.261 45.000 0.00 0.00 32.81 1.85
3579 10373 2.582052 TGGTTCAAGCCACACCTTAAG 58.418 47.619 0.00 0.00 32.81 1.85
3580 10374 1.269723 GGTTCAAGCCACACCTTAAGC 59.730 52.381 0.00 0.00 0.00 3.09
3581 10375 1.953686 GTTCAAGCCACACCTTAAGCA 59.046 47.619 0.00 0.00 0.00 3.91
3582 10376 2.356665 TCAAGCCACACCTTAAGCAA 57.643 45.000 0.00 0.00 0.00 3.91
3583 10377 2.229792 TCAAGCCACACCTTAAGCAAG 58.770 47.619 0.00 0.00 0.00 4.01
3584 10378 0.961753 AAGCCACACCTTAAGCAAGC 59.038 50.000 0.00 0.00 0.00 4.01
3585 10379 0.895559 AGCCACACCTTAAGCAAGCC 60.896 55.000 0.00 0.00 0.00 4.35
3586 10380 1.178534 GCCACACCTTAAGCAAGCCA 61.179 55.000 0.00 0.00 0.00 4.75
3587 10381 0.598065 CCACACCTTAAGCAAGCCAC 59.402 55.000 0.00 0.00 0.00 5.01
3588 10382 1.317613 CACACCTTAAGCAAGCCACA 58.682 50.000 0.00 0.00 0.00 4.17
3589 10383 1.001378 CACACCTTAAGCAAGCCACAC 60.001 52.381 0.00 0.00 0.00 3.82
3590 10384 1.133792 ACACCTTAAGCAAGCCACACT 60.134 47.619 0.00 0.00 0.00 3.55
3591 10385 2.105821 ACACCTTAAGCAAGCCACACTA 59.894 45.455 0.00 0.00 0.00 2.74
3592 10386 2.744202 CACCTTAAGCAAGCCACACTAG 59.256 50.000 0.00 0.00 0.00 2.57
3593 10387 2.637872 ACCTTAAGCAAGCCACACTAGA 59.362 45.455 0.00 0.00 0.00 2.43
3594 10388 3.265791 CCTTAAGCAAGCCACACTAGAG 58.734 50.000 0.00 0.00 0.00 2.43
3595 10389 2.386661 TAAGCAAGCCACACTAGAGC 57.613 50.000 0.00 0.00 0.00 4.09
3596 10390 0.322008 AAGCAAGCCACACTAGAGCC 60.322 55.000 0.00 0.00 0.00 4.70
3597 10391 1.746991 GCAAGCCACACTAGAGCCC 60.747 63.158 0.00 0.00 0.00 5.19
3598 10392 1.078143 CAAGCCACACTAGAGCCCC 60.078 63.158 0.00 0.00 0.00 5.80
3599 10393 1.538876 AAGCCACACTAGAGCCCCA 60.539 57.895 0.00 0.00 0.00 4.96
3600 10394 1.842381 AAGCCACACTAGAGCCCCAC 61.842 60.000 0.00 0.00 0.00 4.61
3601 10395 2.592993 GCCACACTAGAGCCCCACA 61.593 63.158 0.00 0.00 0.00 4.17
3602 10396 1.915078 GCCACACTAGAGCCCCACAT 61.915 60.000 0.00 0.00 0.00 3.21
3603 10397 0.107508 CCACACTAGAGCCCCACATG 60.108 60.000 0.00 0.00 0.00 3.21
3604 10398 0.107508 CACACTAGAGCCCCACATGG 60.108 60.000 0.00 0.00 0.00 3.66
3613 10407 3.518766 CCCCACATGGCATACACAT 57.481 52.632 0.00 0.00 0.00 3.21
3614 10408 2.655090 CCCCACATGGCATACACATA 57.345 50.000 0.00 0.00 0.00 2.29
3615 10409 2.942804 CCCCACATGGCATACACATAA 58.057 47.619 0.00 0.00 0.00 1.90
3616 10410 3.295093 CCCCACATGGCATACACATAAA 58.705 45.455 0.00 0.00 0.00 1.40
3617 10411 3.703556 CCCCACATGGCATACACATAAAA 59.296 43.478 0.00 0.00 0.00 1.52
3618 10412 4.161189 CCCCACATGGCATACACATAAAAA 59.839 41.667 0.00 0.00 0.00 1.94
3619 10413 5.350633 CCCACATGGCATACACATAAAAAG 58.649 41.667 0.00 0.00 0.00 2.27
3620 10414 5.105392 CCCACATGGCATACACATAAAAAGT 60.105 40.000 0.00 0.00 0.00 2.66
3621 10415 5.806502 CCACATGGCATACACATAAAAAGTG 59.193 40.000 0.00 0.00 42.56 3.16
3632 10426 6.695292 CACATAAAAAGTGTGGCAAGATTC 57.305 37.500 0.00 0.00 42.43 2.52
3633 10427 5.634859 CACATAAAAAGTGTGGCAAGATTCC 59.365 40.000 0.00 0.00 42.43 3.01
3634 10428 3.751479 AAAAAGTGTGGCAAGATTCCC 57.249 42.857 0.00 0.00 0.00 3.97
3635 10429 2.683211 AAAGTGTGGCAAGATTCCCT 57.317 45.000 0.00 0.00 0.00 4.20
3636 10430 2.683211 AAGTGTGGCAAGATTCCCTT 57.317 45.000 0.00 0.00 34.91 3.95
3637 10431 3.806949 AAGTGTGGCAAGATTCCCTTA 57.193 42.857 0.00 0.00 32.86 2.69
3638 10432 3.073274 AGTGTGGCAAGATTCCCTTAC 57.927 47.619 0.00 0.00 32.86 2.34
3639 10433 1.737793 GTGTGGCAAGATTCCCTTACG 59.262 52.381 0.00 0.00 32.86 3.18
3640 10434 0.733150 GTGGCAAGATTCCCTTACGC 59.267 55.000 0.00 0.00 32.86 4.42
3641 10435 0.618458 TGGCAAGATTCCCTTACGCT 59.382 50.000 0.00 0.00 32.86 5.07
3642 10436 1.004277 TGGCAAGATTCCCTTACGCTT 59.996 47.619 0.00 0.00 32.86 4.68
3643 10437 1.401905 GGCAAGATTCCCTTACGCTTG 59.598 52.381 0.00 0.00 39.06 4.01
3644 10438 2.084546 GCAAGATTCCCTTACGCTTGT 58.915 47.619 0.00 0.00 38.48 3.16
3645 10439 2.096013 GCAAGATTCCCTTACGCTTGTC 59.904 50.000 0.00 0.00 38.48 3.18
3646 10440 3.334691 CAAGATTCCCTTACGCTTGTCA 58.665 45.455 0.00 0.00 33.22 3.58
3647 10441 3.695830 AGATTCCCTTACGCTTGTCAA 57.304 42.857 0.00 0.00 0.00 3.18
3648 10442 4.015872 AGATTCCCTTACGCTTGTCAAA 57.984 40.909 0.00 0.00 0.00 2.69
3649 10443 4.589908 AGATTCCCTTACGCTTGTCAAAT 58.410 39.130 0.00 0.00 0.00 2.32
3650 10444 5.010282 AGATTCCCTTACGCTTGTCAAATT 58.990 37.500 0.00 0.00 0.00 1.82
3651 10445 4.497473 TTCCCTTACGCTTGTCAAATTG 57.503 40.909 0.00 0.00 0.00 2.32
3652 10446 3.482436 TCCCTTACGCTTGTCAAATTGT 58.518 40.909 0.00 0.00 0.00 2.71
3653 10447 3.252215 TCCCTTACGCTTGTCAAATTGTG 59.748 43.478 0.00 0.00 0.00 3.33
3654 10448 3.004315 CCCTTACGCTTGTCAAATTGTGT 59.996 43.478 0.00 0.00 0.00 3.72
3655 10449 4.219033 CCTTACGCTTGTCAAATTGTGTC 58.781 43.478 0.00 0.00 0.00 3.67
3656 10450 4.024048 CCTTACGCTTGTCAAATTGTGTCT 60.024 41.667 0.00 0.00 0.00 3.41
3657 10451 3.609103 ACGCTTGTCAAATTGTGTCTC 57.391 42.857 0.00 0.00 0.00 3.36
3658 10452 3.206150 ACGCTTGTCAAATTGTGTCTCT 58.794 40.909 0.00 0.00 0.00 3.10
3659 10453 3.248602 ACGCTTGTCAAATTGTGTCTCTC 59.751 43.478 0.00 0.00 0.00 3.20
3660 10454 3.248363 CGCTTGTCAAATTGTGTCTCTCA 59.752 43.478 0.00 0.00 0.00 3.27
3661 10455 4.083643 CGCTTGTCAAATTGTGTCTCTCAT 60.084 41.667 0.00 0.00 0.00 2.90
3662 10456 5.561532 CGCTTGTCAAATTGTGTCTCTCATT 60.562 40.000 0.00 0.00 0.00 2.57
3663 10457 6.211515 GCTTGTCAAATTGTGTCTCTCATTT 58.788 36.000 0.00 0.00 0.00 2.32
3664 10458 6.698766 GCTTGTCAAATTGTGTCTCTCATTTT 59.301 34.615 0.00 0.00 0.00 1.82
3665 10459 7.306399 GCTTGTCAAATTGTGTCTCTCATTTTG 60.306 37.037 0.00 0.00 37.43 2.44
3666 10460 5.978919 TGTCAAATTGTGTCTCTCATTTTGC 59.021 36.000 0.00 8.67 36.73 3.68
3667 10461 6.183360 TGTCAAATTGTGTCTCTCATTTTGCT 60.183 34.615 0.00 0.00 36.73 3.91
3668 10462 7.013178 TGTCAAATTGTGTCTCTCATTTTGCTA 59.987 33.333 0.00 0.00 36.73 3.49
3669 10463 7.862372 GTCAAATTGTGTCTCTCATTTTGCTAA 59.138 33.333 0.00 0.00 36.73 3.09
3670 10464 8.412456 TCAAATTGTGTCTCTCATTTTGCTAAA 58.588 29.630 0.00 0.00 36.73 1.85
3671 10465 8.482429 CAAATTGTGTCTCTCATTTTGCTAAAC 58.518 33.333 0.00 0.00 33.06 2.01
3672 10466 6.942532 TTGTGTCTCTCATTTTGCTAAACT 57.057 33.333 0.00 0.00 0.00 2.66
3673 10467 8.621532 ATTGTGTCTCTCATTTTGCTAAACTA 57.378 30.769 0.00 0.00 0.00 2.24
3674 10468 8.445275 TTGTGTCTCTCATTTTGCTAAACTAA 57.555 30.769 0.00 0.00 0.00 2.24
3675 10469 8.621532 TGTGTCTCTCATTTTGCTAAACTAAT 57.378 30.769 0.00 0.00 0.00 1.73
3676 10470 8.721478 TGTGTCTCTCATTTTGCTAAACTAATC 58.279 33.333 0.00 0.00 0.00 1.75
3677 10471 8.940952 GTGTCTCTCATTTTGCTAAACTAATCT 58.059 33.333 0.00 0.00 0.00 2.40
3678 10472 9.507329 TGTCTCTCATTTTGCTAAACTAATCTT 57.493 29.630 0.00 0.00 0.00 2.40
3686 10480 8.742554 TTTTGCTAAACTAATCTTAAGCAAGC 57.257 30.769 7.51 0.00 41.13 4.01
3687 10481 7.687941 TTGCTAAACTAATCTTAAGCAAGCT 57.312 32.000 3.60 0.00 36.33 3.74
3688 10482 7.687941 TGCTAAACTAATCTTAAGCAAGCTT 57.312 32.000 12.42 12.42 39.83 3.74
3689 10483 7.530010 TGCTAAACTAATCTTAAGCAAGCTTG 58.470 34.615 22.44 22.44 37.47 4.01
3690 10484 6.969473 GCTAAACTAATCTTAAGCAAGCTTGG 59.031 38.462 27.10 10.71 37.47 3.61
3691 10485 4.972514 ACTAATCTTAAGCAAGCTTGGC 57.027 40.909 27.10 18.65 37.47 4.52
3692 10486 4.335416 ACTAATCTTAAGCAAGCTTGGCA 58.665 39.130 27.10 4.73 37.47 4.92
3693 10487 4.766891 ACTAATCTTAAGCAAGCTTGGCAA 59.233 37.500 27.10 10.11 37.47 4.52
3694 10488 4.605640 AATCTTAAGCAAGCTTGGCAAA 57.394 36.364 27.10 15.31 37.47 3.68
3695 10489 4.605640 ATCTTAAGCAAGCTTGGCAAAA 57.394 36.364 27.10 15.02 37.47 2.44
3696 10490 4.399004 TCTTAAGCAAGCTTGGCAAAAA 57.601 36.364 27.10 13.03 37.47 1.94
3697 10491 4.959723 TCTTAAGCAAGCTTGGCAAAAAT 58.040 34.783 27.10 8.01 37.47 1.82
3698 10492 4.751098 TCTTAAGCAAGCTTGGCAAAAATG 59.249 37.500 27.10 0.00 37.47 2.32
3699 10493 2.625695 AGCAAGCTTGGCAAAAATGT 57.374 40.000 27.10 0.41 0.00 2.71
3700 10494 2.215196 AGCAAGCTTGGCAAAAATGTG 58.785 42.857 27.10 0.00 0.00 3.21
3701 10495 1.941975 GCAAGCTTGGCAAAAATGTGT 59.058 42.857 27.10 0.00 0.00 3.72
3702 10496 2.286536 GCAAGCTTGGCAAAAATGTGTG 60.287 45.455 27.10 0.00 0.00 3.82
3703 10497 2.243602 AGCTTGGCAAAAATGTGTGG 57.756 45.000 0.00 0.00 0.00 4.17
3704 10498 0.587768 GCTTGGCAAAAATGTGTGGC 59.412 50.000 0.00 0.00 40.55 5.01
3707 10501 2.634815 TGGCAAAAATGTGTGGCAAT 57.365 40.000 0.00 0.00 46.13 3.56
3708 10502 2.219458 TGGCAAAAATGTGTGGCAATG 58.781 42.857 0.00 0.00 46.13 2.82
3709 10503 1.069091 GGCAAAAATGTGTGGCAATGC 60.069 47.619 0.00 0.00 39.93 3.56
3710 10504 1.602851 GCAAAAATGTGTGGCAATGCA 59.397 42.857 7.79 0.00 0.00 3.96
3711 10505 2.033049 GCAAAAATGTGTGGCAATGCAA 59.967 40.909 7.79 0.00 0.00 4.08
3712 10506 3.850374 GCAAAAATGTGTGGCAATGCAAG 60.850 43.478 7.79 0.00 0.00 4.01
3713 10507 2.172851 AAATGTGTGGCAATGCAAGG 57.827 45.000 7.79 0.00 0.00 3.61
3714 10508 0.320946 AATGTGTGGCAATGCAAGGC 60.321 50.000 7.79 8.84 0.00 4.35
3719 10513 4.664062 GGCAATGCAAGGCCTAGA 57.336 55.556 21.15 0.00 46.74 2.43
3720 10514 2.886382 GGCAATGCAAGGCCTAGAA 58.114 52.632 21.15 0.00 46.74 2.10
3721 10515 0.457443 GGCAATGCAAGGCCTAGAAC 59.543 55.000 21.15 0.00 46.74 3.01
3722 10516 0.457443 GCAATGCAAGGCCTAGAACC 59.543 55.000 5.16 0.00 0.00 3.62
3723 10517 1.838112 CAATGCAAGGCCTAGAACCA 58.162 50.000 5.16 0.00 0.00 3.67
3724 10518 2.170166 CAATGCAAGGCCTAGAACCAA 58.830 47.619 5.16 0.00 0.00 3.67
3725 10519 2.562298 CAATGCAAGGCCTAGAACCAAA 59.438 45.455 5.16 0.00 0.00 3.28
3726 10520 1.616159 TGCAAGGCCTAGAACCAAAC 58.384 50.000 5.16 0.00 0.00 2.93
3727 10521 1.133637 TGCAAGGCCTAGAACCAAACA 60.134 47.619 5.16 0.00 0.00 2.83
3728 10522 1.541588 GCAAGGCCTAGAACCAAACAG 59.458 52.381 5.16 0.00 0.00 3.16
3729 10523 1.541588 CAAGGCCTAGAACCAAACAGC 59.458 52.381 5.16 0.00 0.00 4.40
3730 10524 0.038310 AGGCCTAGAACCAAACAGCC 59.962 55.000 1.29 0.00 39.25 4.85
3731 10525 0.965866 GGCCTAGAACCAAACAGCCC 60.966 60.000 0.00 0.00 32.68 5.19
3732 10526 0.965866 GCCTAGAACCAAACAGCCCC 60.966 60.000 0.00 0.00 0.00 5.80
3733 10527 0.698818 CCTAGAACCAAACAGCCCCT 59.301 55.000 0.00 0.00 0.00 4.79
3734 10528 1.913419 CCTAGAACCAAACAGCCCCTA 59.087 52.381 0.00 0.00 0.00 3.53
3735 10529 2.307686 CCTAGAACCAAACAGCCCCTAA 59.692 50.000 0.00 0.00 0.00 2.69
3736 10530 2.586648 AGAACCAAACAGCCCCTAAG 57.413 50.000 0.00 0.00 0.00 2.18
3737 10531 2.062636 AGAACCAAACAGCCCCTAAGA 58.937 47.619 0.00 0.00 0.00 2.10
3738 10532 2.649816 AGAACCAAACAGCCCCTAAGAT 59.350 45.455 0.00 0.00 0.00 2.40
3739 10533 3.076032 AGAACCAAACAGCCCCTAAGATT 59.924 43.478 0.00 0.00 0.00 2.40
3740 10534 3.542969 ACCAAACAGCCCCTAAGATTT 57.457 42.857 0.00 0.00 0.00 2.17
3741 10535 3.856900 ACCAAACAGCCCCTAAGATTTT 58.143 40.909 0.00 0.00 0.00 1.82
3742 10536 4.231273 ACCAAACAGCCCCTAAGATTTTT 58.769 39.130 0.00 0.00 0.00 1.94
3775 10569 9.297037 AGTAATTGTTCCAAAACTAAGCTACAT 57.703 29.630 0.00 0.00 36.30 2.29
3785 10579 7.970614 CCAAAACTAAGCTACATGGAAAGAATC 59.029 37.037 0.00 0.00 0.00 2.52
3786 10580 8.514594 CAAAACTAAGCTACATGGAAAGAATCA 58.485 33.333 0.00 0.00 0.00 2.57
3789 10583 7.398024 ACTAAGCTACATGGAAAGAATCAAGT 58.602 34.615 0.00 0.00 0.00 3.16
3798 10592 1.247567 AAGAATCAAGTGGCCCAACG 58.752 50.000 0.00 0.00 0.00 4.10
3818 10612 2.526120 GCATAGCGCACGGGAAGTC 61.526 63.158 11.47 0.00 41.79 3.01
3822 10616 1.529152 TAGCGCACGGGAAGTCTCAA 61.529 55.000 11.47 0.00 0.00 3.02
3827 10621 1.200020 GCACGGGAAGTCTCAAAATGG 59.800 52.381 0.00 0.00 0.00 3.16
3890 10685 6.968263 TTTCATGGTTTTCTGGTCATGTTA 57.032 33.333 0.00 0.00 38.39 2.41
3893 10688 4.098914 TGGTTTTCTGGTCATGTTAGCT 57.901 40.909 0.00 0.00 0.00 3.32
3896 10691 2.787473 TTCTGGTCATGTTAGCTGGG 57.213 50.000 0.00 0.00 0.00 4.45
3897 10692 0.253044 TCTGGTCATGTTAGCTGGGC 59.747 55.000 0.00 0.00 0.00 5.36
3898 10693 0.254178 CTGGTCATGTTAGCTGGGCT 59.746 55.000 0.00 0.00 43.41 5.19
3899 10694 1.486310 CTGGTCATGTTAGCTGGGCTA 59.514 52.381 0.00 0.00 40.44 3.93
3900 10695 1.209504 TGGTCATGTTAGCTGGGCTAC 59.790 52.381 0.00 0.00 41.12 3.58
3901 10696 1.486726 GGTCATGTTAGCTGGGCTACT 59.513 52.381 0.00 0.00 41.12 2.57
3902 10697 2.092914 GGTCATGTTAGCTGGGCTACTT 60.093 50.000 0.00 0.00 41.12 2.24
3903 10698 2.939103 GTCATGTTAGCTGGGCTACTTG 59.061 50.000 0.00 4.50 41.12 3.16
3904 10699 1.672881 CATGTTAGCTGGGCTACTTGC 59.327 52.381 0.00 0.00 41.12 4.01
3905 10700 0.984230 TGTTAGCTGGGCTACTTGCT 59.016 50.000 0.00 0.00 41.12 3.91
3906 10701 2.184533 TGTTAGCTGGGCTACTTGCTA 58.815 47.619 0.00 0.00 41.12 3.49
3907 10702 2.168521 TGTTAGCTGGGCTACTTGCTAG 59.831 50.000 0.00 0.00 41.12 3.42
3908 10703 0.753262 TAGCTGGGCTACTTGCTAGC 59.247 55.000 8.10 8.10 46.60 3.42
3909 10704 1.524482 GCTGGGCTACTTGCTAGCT 59.476 57.895 17.23 0.00 46.53 3.32
3910 10705 0.753262 GCTGGGCTACTTGCTAGCTA 59.247 55.000 17.23 7.59 46.53 3.32
3911 10706 1.139058 GCTGGGCTACTTGCTAGCTAA 59.861 52.381 17.23 7.78 46.53 3.09
3912 10707 2.827652 CTGGGCTACTTGCTAGCTAAC 58.172 52.381 17.23 0.00 46.53 2.34
3913 10708 2.168521 CTGGGCTACTTGCTAGCTAACA 59.831 50.000 17.23 0.00 46.53 2.41
3914 10709 2.771943 TGGGCTACTTGCTAGCTAACAT 59.228 45.455 17.23 0.00 46.53 2.71
3915 10710 3.199946 TGGGCTACTTGCTAGCTAACATT 59.800 43.478 17.23 0.00 46.53 2.71
3916 10711 4.200092 GGGCTACTTGCTAGCTAACATTT 58.800 43.478 17.23 0.00 46.53 2.32
3917 10712 4.640647 GGGCTACTTGCTAGCTAACATTTT 59.359 41.667 17.23 0.00 46.53 1.82
3918 10713 5.125578 GGGCTACTTGCTAGCTAACATTTTT 59.874 40.000 17.23 0.00 46.53 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 53 2.673200 GCTGGATGGACTGGCCTCA 61.673 63.158 3.32 0.00 37.63 3.86
67 69 0.826715 ATGTAGATGACTGCCGTGCT 59.173 50.000 0.00 0.00 0.00 4.40
74 76 4.564372 CGTTGTTGGAGATGTAGATGACTG 59.436 45.833 0.00 0.00 0.00 3.51
96 98 6.425577 AAGCAACTACTCTACTTCTACTCG 57.574 41.667 0.00 0.00 0.00 4.18
108 110 6.487689 AGCTACATTTGAAAGCAACTACTC 57.512 37.500 10.64 0.00 38.75 2.59
110 112 5.107065 ACGAGCTACATTTGAAAGCAACTAC 60.107 40.000 10.64 0.00 38.75 2.73
116 118 4.783242 TCAAACGAGCTACATTTGAAAGC 58.217 39.130 14.10 0.00 38.92 3.51
130 132 7.175073 TCATCTACGTACTAGATCAAACGAG 57.825 40.000 13.65 8.28 39.84 4.18
157 159 2.101783 ACACCATGCATGTTATGTGGG 58.898 47.619 26.90 15.77 32.36 4.61
164 166 4.502105 TCCATACTACACCATGCATGTT 57.498 40.909 24.58 8.67 0.00 2.71
190 192 4.620567 GCACAATCCTCAAATGTAAACCCC 60.621 45.833 0.00 0.00 0.00 4.95
223 225 0.033208 GGCCACCCCTCATTTCATCA 60.033 55.000 0.00 0.00 0.00 3.07
239 244 0.255890 TCCACAAATAGGAGCAGGCC 59.744 55.000 0.00 0.00 0.00 5.19
240 245 1.952296 CATCCACAAATAGGAGCAGGC 59.048 52.381 0.00 0.00 38.83 4.85
242 247 1.600957 CGCATCCACAAATAGGAGCAG 59.399 52.381 0.00 0.00 38.83 4.24
250 255 2.909457 ATCCGGGCGCATCCACAAAT 62.909 55.000 10.83 0.00 36.21 2.32
252 257 2.736826 TATCCGGGCGCATCCACAA 61.737 57.895 10.83 0.00 36.21 3.33
261 266 2.278596 CACAGACGTATCCGGGCG 60.279 66.667 0.00 7.05 38.78 6.13
264 269 0.744874 ATGTCCACAGACGTATCCGG 59.255 55.000 0.00 0.00 46.74 5.14
277 282 3.304829 TCAATCCGACCTCATATGTCCA 58.695 45.455 1.90 0.00 0.00 4.02
307 312 6.870965 CCTTATAGTCAGCCATCATCTACAAC 59.129 42.308 0.00 0.00 0.00 3.32
310 315 6.842437 TCCTTATAGTCAGCCATCATCTAC 57.158 41.667 0.00 0.00 0.00 2.59
317 322 6.465894 GGTGGTATTTCCTTATAGTCAGCCAT 60.466 42.308 0.00 0.00 37.07 4.40
320 325 5.758784 GTGGTGGTATTTCCTTATAGTCAGC 59.241 44.000 0.00 0.00 37.07 4.26
321 326 7.125792 AGTGGTGGTATTTCCTTATAGTCAG 57.874 40.000 0.00 0.00 37.07 3.51
325 330 9.273016 CATACAAGTGGTGGTATTTCCTTATAG 57.727 37.037 0.00 0.00 37.07 1.31
329 334 4.705023 GCATACAAGTGGTGGTATTTCCTT 59.295 41.667 0.00 0.00 37.07 3.36
333 338 4.270008 GGAGCATACAAGTGGTGGTATTT 58.730 43.478 0.00 0.00 0.00 1.40
334 339 3.371595 GGGAGCATACAAGTGGTGGTATT 60.372 47.826 0.00 0.00 0.00 1.89
340 345 1.915489 TCATGGGAGCATACAAGTGGT 59.085 47.619 0.00 0.00 0.00 4.16
341 346 2.715749 TCATGGGAGCATACAAGTGG 57.284 50.000 0.00 0.00 0.00 4.00
342 347 4.067896 GGTATCATGGGAGCATACAAGTG 58.932 47.826 0.00 0.00 0.00 3.16
343 348 3.716353 TGGTATCATGGGAGCATACAAGT 59.284 43.478 0.00 0.00 0.00 3.16
344 349 4.356405 TGGTATCATGGGAGCATACAAG 57.644 45.455 0.00 0.00 0.00 3.16
345 350 4.787135 TTGGTATCATGGGAGCATACAA 57.213 40.909 0.00 0.00 0.00 2.41
346 351 4.999469 ATTGGTATCATGGGAGCATACA 57.001 40.909 0.00 0.00 0.00 2.29
412 417 4.998671 TGTGTTGTGAACATCCACATTT 57.001 36.364 10.64 0.00 45.31 2.32
415 420 3.286353 ACATGTGTTGTGAACATCCACA 58.714 40.909 14.86 14.86 44.35 4.17
538 546 8.480643 GTGTAGCTTATGACACTATTCTTGTT 57.519 34.615 9.74 0.00 42.21 2.83
557 565 6.743575 AAAACTGGATGTGAATAGTGTAGC 57.256 37.500 0.00 0.00 0.00 3.58
599 607 6.460781 TCAGACCGAAATACAAAGTACACAT 58.539 36.000 0.00 0.00 0.00 3.21
632 640 3.134081 ACATATGTGTACAGTACAGGCCC 59.866 47.826 14.03 3.04 39.77 5.80
654 662 7.664082 AACAAAAATGTGAATGTTGACAACA 57.336 28.000 22.61 22.61 46.94 3.33
672 680 9.579932 AAATGGCTTAAAATATTCCCAACAAAA 57.420 25.926 0.00 0.00 0.00 2.44
692 700 9.727627 TCAATTTGAAAATGTTGTTTAAATGGC 57.272 25.926 0.00 0.00 0.00 4.40
701 709 7.545265 CCCGTGATATCAATTTGAAAATGTTGT 59.455 33.333 7.07 0.00 0.00 3.32
702 710 7.758980 TCCCGTGATATCAATTTGAAAATGTTG 59.241 33.333 7.07 0.00 0.00 3.33
705 713 7.483307 ACTCCCGTGATATCAATTTGAAAATG 58.517 34.615 7.07 0.00 0.00 2.32
724 732 1.602165 GCCATCACGTGTATACTCCCG 60.602 57.143 16.51 6.53 0.00 5.14
744 752 7.757941 TCTACAGAGAGAATATCAGGTGATG 57.242 40.000 2.56 0.00 36.05 3.07
765 773 7.016268 CCTGGGTTAATTACCTAAGAGCATCTA 59.984 40.741 0.00 0.00 46.69 1.98
773 781 7.418712 CCTGACTACCTGGGTTAATTACCTAAG 60.419 44.444 0.00 0.00 46.86 2.18
779 787 6.155049 GTGTACCTGACTACCTGGGTTAATTA 59.845 42.308 0.00 0.00 38.11 1.40
780 788 5.046087 GTGTACCTGACTACCTGGGTTAATT 60.046 44.000 0.00 0.00 38.11 1.40
783 791 3.434309 GTGTACCTGACTACCTGGGTTA 58.566 50.000 0.00 0.00 38.11 2.85
784 792 2.254508 GTGTACCTGACTACCTGGGTT 58.745 52.381 0.00 0.00 38.11 4.11
787 795 0.815734 CGGTGTACCTGACTACCTGG 59.184 60.000 0.00 0.00 39.53 4.45
788 796 0.172803 GCGGTGTACCTGACTACCTG 59.827 60.000 0.00 0.00 30.98 4.00
789 797 1.310933 CGCGGTGTACCTGACTACCT 61.311 60.000 0.00 0.00 30.98 3.08
793 801 4.065281 GGCGCGGTGTACCTGACT 62.065 66.667 8.83 0.00 0.00 3.41
879 1159 5.755409 AGTGTGGTTTGAGGATGTGTATA 57.245 39.130 0.00 0.00 0.00 1.47
880 1160 4.640771 AGTGTGGTTTGAGGATGTGTAT 57.359 40.909 0.00 0.00 0.00 2.29
962 1251 0.886490 CTTTTGGTGTGGAGCTCGCT 60.886 55.000 7.83 0.00 0.00 4.93
964 1253 0.868406 GACTTTTGGTGTGGAGCTCG 59.132 55.000 7.83 0.00 0.00 5.03
965 1254 1.967319 TGACTTTTGGTGTGGAGCTC 58.033 50.000 4.71 4.71 0.00 4.09
995 1290 4.505217 GCGACGACGGCATTGCTG 62.505 66.667 15.93 15.93 41.29 4.41
1191 1495 2.202797 CTGGCGACGAGGATGGTG 60.203 66.667 0.00 0.00 0.00 4.17
1299 1603 1.834822 GGAGAGGATGACCCCCGAG 60.835 68.421 0.00 0.00 36.73 4.63
1347 1651 0.784778 GCGAGTTGAGGTTGTCGAAG 59.215 55.000 0.00 0.00 34.28 3.79
1695 2057 2.179018 CGTGCAAGCGGGAATTGG 59.821 61.111 0.00 0.00 0.00 3.16
1713 2118 2.749776 TGAAAAGCATCTGAACGACGA 58.250 42.857 0.00 0.00 0.00 4.20
1727 2163 4.523943 TGGATCCATGGTTGAGTTGAAAAG 59.476 41.667 11.44 0.00 0.00 2.27
1815 2257 7.030768 GGCATCTATGGCGTAAAAACTAAAAA 58.969 34.615 0.34 0.00 43.58 1.94
1816 2258 6.557110 GGCATCTATGGCGTAAAAACTAAAA 58.443 36.000 0.34 0.00 43.58 1.52
1892 5333 6.042437 TGCTCTGCTTATCTATCTTTCCATGA 59.958 38.462 0.00 0.00 0.00 3.07
1974 7416 1.517257 CTCTAGCCGCGACAACCAG 60.517 63.158 8.23 0.00 0.00 4.00
2028 7474 9.197694 CTAGACAAATTAATGGAGGACGATTAG 57.802 37.037 0.00 0.00 30.78 1.73
2030 7476 7.565680 ACTAGACAAATTAATGGAGGACGATT 58.434 34.615 0.00 0.00 0.00 3.34
2031 7477 7.125792 ACTAGACAAATTAATGGAGGACGAT 57.874 36.000 0.00 0.00 0.00 3.73
2034 7480 7.988028 AGCTTACTAGACAAATTAATGGAGGAC 59.012 37.037 0.00 0.00 0.00 3.85
2037 7483 9.262358 GGTAGCTTACTAGACAAATTAATGGAG 57.738 37.037 0.00 0.00 0.00 3.86
2058 7504 9.595823 TCACATCTTAAACTACATTTAGGTAGC 57.404 33.333 1.77 0.00 43.61 3.58
2162 7889 0.673333 TGCGTGGTCATGCTTGGTAG 60.673 55.000 15.08 0.00 43.48 3.18
2216 7955 0.585357 GCTACATGCATGAAGCCTCG 59.415 55.000 32.75 7.50 44.83 4.63
2238 7977 6.819397 AGTGAAACCAGGACTAATTTAAGC 57.181 37.500 0.00 0.00 37.80 3.09
2272 8314 7.116948 AGTCAGAAAGTCATAAGTCACAATTCG 59.883 37.037 0.00 0.00 0.00 3.34
2285 8327 8.506168 TTTGAAACTACAAGTCAGAAAGTCAT 57.494 30.769 0.00 0.00 0.00 3.06
2287 8329 7.975750 ACTTTGAAACTACAAGTCAGAAAGTC 58.024 34.615 0.00 0.00 30.39 3.01
2288 8330 7.923414 ACTTTGAAACTACAAGTCAGAAAGT 57.077 32.000 0.00 0.00 30.90 2.66
2292 8334 9.444600 AACTTTACTTTGAAACTACAAGTCAGA 57.555 29.630 0.00 0.00 0.00 3.27
2294 8336 9.834628 CAAACTTTACTTTGAAACTACAAGTCA 57.165 29.630 0.00 0.00 33.61 3.41
2297 8339 9.834628 TCACAAACTTTACTTTGAAACTACAAG 57.165 29.630 0.00 0.00 35.46 3.16
2302 8344 9.705290 ACATTTCACAAACTTTACTTTGAAACT 57.295 25.926 0.00 0.00 36.18 2.66
2303 8345 9.739786 CACATTTCACAAACTTTACTTTGAAAC 57.260 29.630 0.00 0.00 36.18 2.78
2306 8348 7.757624 GGTCACATTTCACAAACTTTACTTTGA 59.242 33.333 0.00 0.00 35.46 2.69
2307 8349 7.759433 AGGTCACATTTCACAAACTTTACTTTG 59.241 33.333 0.00 0.00 37.20 2.77
2308 8350 7.836842 AGGTCACATTTCACAAACTTTACTTT 58.163 30.769 0.00 0.00 0.00 2.66
2311 8353 7.432252 CAGAAGGTCACATTTCACAAACTTTAC 59.568 37.037 0.00 0.00 0.00 2.01
2314 8356 5.652014 TCAGAAGGTCACATTTCACAAACTT 59.348 36.000 0.00 0.00 0.00 2.66
2315 8357 5.192927 TCAGAAGGTCACATTTCACAAACT 58.807 37.500 0.00 0.00 0.00 2.66
2316 8358 5.499139 TCAGAAGGTCACATTTCACAAAC 57.501 39.130 0.00 0.00 0.00 2.93
2317 8359 4.036734 GCTCAGAAGGTCACATTTCACAAA 59.963 41.667 0.00 0.00 0.00 2.83
2318 8360 3.565482 GCTCAGAAGGTCACATTTCACAA 59.435 43.478 0.00 0.00 0.00 3.33
2319 8361 3.141398 GCTCAGAAGGTCACATTTCACA 58.859 45.455 0.00 0.00 0.00 3.58
2320 8362 3.141398 TGCTCAGAAGGTCACATTTCAC 58.859 45.455 0.00 0.00 0.00 3.18
2321 8363 3.490439 TGCTCAGAAGGTCACATTTCA 57.510 42.857 0.00 0.00 0.00 2.69
2322 8364 4.005650 TCATGCTCAGAAGGTCACATTTC 58.994 43.478 0.00 0.00 0.00 2.17
2323 8365 4.008330 CTCATGCTCAGAAGGTCACATTT 58.992 43.478 0.00 0.00 0.00 2.32
2324 8366 3.262660 TCTCATGCTCAGAAGGTCACATT 59.737 43.478 0.00 0.00 0.00 2.71
2327 8369 3.325293 TTCTCATGCTCAGAAGGTCAC 57.675 47.619 0.00 0.00 0.00 3.67
2328 8370 3.773667 AGATTCTCATGCTCAGAAGGTCA 59.226 43.478 2.28 0.00 33.36 4.02
2331 8373 6.512342 AAAAAGATTCTCATGCTCAGAAGG 57.488 37.500 2.28 0.00 33.36 3.46
2355 8461 3.168271 GCGCATGCGTCTCTTTCA 58.832 55.556 37.54 0.00 42.09 2.69
2365 8471 4.214980 AGTTGTCTTAATATGCGCATGC 57.785 40.909 32.48 7.91 43.20 4.06
2366 8472 6.285790 TGTAGTTGTCTTAATATGCGCATG 57.714 37.500 32.48 15.56 0.00 4.06
2367 8473 6.538742 ACTTGTAGTTGTCTTAATATGCGCAT 59.461 34.615 28.23 28.23 0.00 4.73
2368 8474 5.872617 ACTTGTAGTTGTCTTAATATGCGCA 59.127 36.000 14.96 14.96 0.00 6.09
2369 8475 6.345920 ACTTGTAGTTGTCTTAATATGCGC 57.654 37.500 0.00 0.00 0.00 6.09
2370 8476 8.865978 TGTAACTTGTAGTTGTCTTAATATGCG 58.134 33.333 2.45 0.00 39.11 4.73
2464 9251 6.724441 TCCAGAACCTGTACATATATGTAGGG 59.276 42.308 27.37 27.12 43.32 3.53
2466 9253 8.637196 TCTCCAGAACCTGTACATATATGTAG 57.363 38.462 23.03 15.28 43.32 2.74
2468 9255 7.038729 CCATCTCCAGAACCTGTACATATATGT 60.039 40.741 21.57 21.57 44.48 2.29
2634 9421 1.226974 CATCCTGGTGCCGTACTCG 60.227 63.158 0.00 0.00 0.00 4.18
2648 9435 4.883354 CCAGCCCGGCCTTCATCC 62.883 72.222 5.55 0.00 0.00 3.51
2987 9775 1.781786 TAAAGCAAAGTTGGGGTGCA 58.218 45.000 0.44 0.00 40.83 4.57
3001 9789 8.294341 ACATACACGTATACACATCATAAAGC 57.706 34.615 3.32 0.00 0.00 3.51
3012 9800 5.639931 ACACATTGCAACATACACGTATACA 59.360 36.000 0.00 0.00 0.00 2.29
3079 9872 7.926018 TGATCGATGAAGCAAGCTTAATTACTA 59.074 33.333 0.54 0.00 36.26 1.82
3097 9890 2.620585 TGCTACCTGAGAGTGATCGATG 59.379 50.000 0.54 0.00 0.00 3.84
3113 9906 3.402058 AGAACGTACGTGAGATGCTAC 57.598 47.619 23.57 5.38 0.00 3.58
3128 9921 6.682746 ACATCTACATAGGATTGCTAGAACG 58.317 40.000 0.00 0.00 0.00 3.95
3129 9922 7.093992 GGACATCTACATAGGATTGCTAGAAC 58.906 42.308 0.00 0.00 0.00 3.01
3130 9923 6.782494 TGGACATCTACATAGGATTGCTAGAA 59.218 38.462 0.00 0.00 0.00 2.10
3131 9924 6.209589 GTGGACATCTACATAGGATTGCTAGA 59.790 42.308 0.00 0.00 0.00 2.43
3132 9925 6.393990 GTGGACATCTACATAGGATTGCTAG 58.606 44.000 0.00 0.00 0.00 3.42
3152 9946 1.691976 CAGTACTTGGTGTCTGGTGGA 59.308 52.381 0.00 0.00 0.00 4.02
3184 9978 6.144402 CCAGAAAAGCATGACATTTTACACAC 59.856 38.462 0.00 0.00 0.00 3.82
3185 9979 6.215121 CCAGAAAAGCATGACATTTTACACA 58.785 36.000 0.00 0.00 0.00 3.72
3186 9980 5.119125 GCCAGAAAAGCATGACATTTTACAC 59.881 40.000 0.00 0.00 0.00 2.90
3187 9981 5.229423 GCCAGAAAAGCATGACATTTTACA 58.771 37.500 0.00 0.00 0.00 2.41
3188 9982 4.627035 GGCCAGAAAAGCATGACATTTTAC 59.373 41.667 0.00 0.00 0.00 2.01
3189 9983 4.282957 TGGCCAGAAAAGCATGACATTTTA 59.717 37.500 0.00 0.00 0.00 1.52
3190 9984 3.071312 TGGCCAGAAAAGCATGACATTTT 59.929 39.130 0.00 0.00 0.00 1.82
3191 9985 2.633967 TGGCCAGAAAAGCATGACATTT 59.366 40.909 0.00 0.00 0.00 2.32
3192 9986 2.250031 TGGCCAGAAAAGCATGACATT 58.750 42.857 0.00 0.00 0.00 2.71
3193 9987 1.927487 TGGCCAGAAAAGCATGACAT 58.073 45.000 0.00 0.00 0.00 3.06
3194 9988 1.546923 CATGGCCAGAAAAGCATGACA 59.453 47.619 13.05 0.00 0.00 3.58
3195 9989 1.547372 ACATGGCCAGAAAAGCATGAC 59.453 47.619 13.05 0.00 0.00 3.06
3196 9990 1.927487 ACATGGCCAGAAAAGCATGA 58.073 45.000 13.05 0.00 0.00 3.07
3197 9991 2.754946 AACATGGCCAGAAAAGCATG 57.245 45.000 13.05 4.08 0.00 4.06
3198 9992 3.834231 AGTTAACATGGCCAGAAAAGCAT 59.166 39.130 13.05 0.00 0.00 3.79
3199 9993 3.005684 CAGTTAACATGGCCAGAAAAGCA 59.994 43.478 13.05 0.00 0.00 3.91
3200 9994 3.578688 CAGTTAACATGGCCAGAAAAGC 58.421 45.455 13.05 0.00 0.00 3.51
3201 9995 3.056607 CCCAGTTAACATGGCCAGAAAAG 60.057 47.826 13.05 0.60 36.43 2.27
3202 9996 2.896685 CCCAGTTAACATGGCCAGAAAA 59.103 45.455 13.05 0.00 36.43 2.29
3203 9997 2.158385 ACCCAGTTAACATGGCCAGAAA 60.158 45.455 13.05 0.00 36.43 2.52
3204 9998 1.427368 ACCCAGTTAACATGGCCAGAA 59.573 47.619 13.05 0.00 36.43 3.02
3205 9999 1.072266 ACCCAGTTAACATGGCCAGA 58.928 50.000 13.05 0.00 36.43 3.86
3206 10000 1.545582 CAACCCAGTTAACATGGCCAG 59.454 52.381 13.05 6.08 36.43 4.85
3207 10001 1.133325 ACAACCCAGTTAACATGGCCA 60.133 47.619 8.56 8.56 36.43 5.36
3208 10002 1.544246 GACAACCCAGTTAACATGGCC 59.456 52.381 8.61 0.00 36.43 5.36
3209 10003 1.199097 CGACAACCCAGTTAACATGGC 59.801 52.381 8.61 0.22 36.43 4.40
3210 10004 2.225491 CACGACAACCCAGTTAACATGG 59.775 50.000 8.61 11.91 37.58 3.66
3211 10005 2.875933 ACACGACAACCCAGTTAACATG 59.124 45.455 8.61 3.45 0.00 3.21
3212 10006 3.135994 GACACGACAACCCAGTTAACAT 58.864 45.455 8.61 0.00 0.00 2.71
3213 10007 2.093606 TGACACGACAACCCAGTTAACA 60.094 45.455 8.61 0.00 0.00 2.41
3214 10008 2.553086 TGACACGACAACCCAGTTAAC 58.447 47.619 0.00 0.00 0.00 2.01
3215 10009 2.983907 TGACACGACAACCCAGTTAA 57.016 45.000 0.00 0.00 0.00 2.01
3216 10010 2.983907 TTGACACGACAACCCAGTTA 57.016 45.000 0.00 0.00 0.00 2.24
3217 10011 2.116827 TTTGACACGACAACCCAGTT 57.883 45.000 0.00 0.00 0.00 3.16
3218 10012 2.341846 ATTTGACACGACAACCCAGT 57.658 45.000 0.00 0.00 0.00 4.00
3219 10013 4.215399 ACATAATTTGACACGACAACCCAG 59.785 41.667 0.00 0.00 0.00 4.45
3220 10014 4.138290 ACATAATTTGACACGACAACCCA 58.862 39.130 0.00 0.00 0.00 4.51
3221 10015 4.759516 ACATAATTTGACACGACAACCC 57.240 40.909 0.00 0.00 0.00 4.11
3222 10016 5.048991 AGGAACATAATTTGACACGACAACC 60.049 40.000 0.00 0.00 0.00 3.77
3223 10017 5.997385 AGGAACATAATTTGACACGACAAC 58.003 37.500 0.00 0.00 0.00 3.32
3224 10018 6.627395 AAGGAACATAATTTGACACGACAA 57.373 33.333 0.00 0.00 0.00 3.18
3260 10054 2.650322 AGACGCTTCCCTTTCAACAAA 58.350 42.857 0.00 0.00 0.00 2.83
3270 10064 5.116069 TCAAACATTAAAAGACGCTTCCC 57.884 39.130 0.00 0.00 0.00 3.97
3306 10100 3.518303 AGTAGACGCTGGGTATCCTTTTT 59.482 43.478 0.00 0.00 0.00 1.94
3308 10102 2.694109 GAGTAGACGCTGGGTATCCTTT 59.306 50.000 0.00 0.00 0.00 3.11
3309 10103 2.308690 GAGTAGACGCTGGGTATCCTT 58.691 52.381 0.00 0.00 0.00 3.36
3310 10104 1.479021 GGAGTAGACGCTGGGTATCCT 60.479 57.143 0.00 0.00 0.00 3.24
3311 10105 0.960286 GGAGTAGACGCTGGGTATCC 59.040 60.000 0.00 0.18 0.00 2.59
3312 10106 1.609555 CAGGAGTAGACGCTGGGTATC 59.390 57.143 0.00 0.00 0.00 2.24
3314 10108 0.622136 TCAGGAGTAGACGCTGGGTA 59.378 55.000 0.00 0.00 0.00 3.69
3315 10109 0.681564 CTCAGGAGTAGACGCTGGGT 60.682 60.000 0.00 0.00 0.00 4.51
3316 10110 0.394488 TCTCAGGAGTAGACGCTGGG 60.394 60.000 0.00 0.00 0.00 4.45
3317 10111 1.686355 ATCTCAGGAGTAGACGCTGG 58.314 55.000 0.00 0.00 0.00 4.85
3318 10112 2.685388 TGAATCTCAGGAGTAGACGCTG 59.315 50.000 0.00 0.00 0.00 5.18
3319 10113 2.685897 GTGAATCTCAGGAGTAGACGCT 59.314 50.000 0.00 0.00 0.00 5.07
3356 10150 8.070171 CGTGTTCACTCAGATTTTTAGTGATTT 58.930 33.333 5.33 0.00 46.53 2.17
3358 10152 6.706270 ACGTGTTCACTCAGATTTTTAGTGAT 59.294 34.615 5.33 0.00 46.53 3.06
3360 10154 6.287107 ACGTGTTCACTCAGATTTTTAGTG 57.713 37.500 0.00 0.00 41.58 2.74
3380 10174 4.154195 GCTTGATTCAACTACATCCAACGT 59.846 41.667 0.00 0.00 0.00 3.99
3382 10176 4.391830 TCGCTTGATTCAACTACATCCAAC 59.608 41.667 0.00 0.00 0.00 3.77
3391 10185 5.456192 CGAATAGTTCGCTTGATTCAACT 57.544 39.130 0.00 0.00 46.97 3.16
3419 10213 1.970917 GCAAATCGACCGGCAGACAG 61.971 60.000 0.00 0.00 0.00 3.51
3423 10217 1.063006 CATGCAAATCGACCGGCAG 59.937 57.895 0.00 0.00 39.95 4.85
3428 10222 1.226379 CCGTGCATGCAAATCGACC 60.226 57.895 24.58 7.08 0.00 4.79
3429 10223 0.378257 ATCCGTGCATGCAAATCGAC 59.622 50.000 24.58 7.89 0.00 4.20
3446 10240 4.142403 TGAAACAATTCCCGCATTGAGATC 60.142 41.667 1.81 0.00 37.55 2.75
3457 10251 5.071250 ACCCCTTAGTTTTGAAACAATTCCC 59.929 40.000 9.08 0.00 41.30 3.97
3467 10261 4.354662 ACCAAACAACCCCTTAGTTTTGA 58.645 39.130 0.00 0.00 33.54 2.69
3468 10262 4.746535 ACCAAACAACCCCTTAGTTTTG 57.253 40.909 0.00 0.00 33.54 2.44
3469 10263 5.013287 ACAAACCAAACAACCCCTTAGTTTT 59.987 36.000 0.00 0.00 33.54 2.43
3470 10264 4.532916 ACAAACCAAACAACCCCTTAGTTT 59.467 37.500 0.00 0.00 36.00 2.66
3471 10265 4.081365 CACAAACCAAACAACCCCTTAGTT 60.081 41.667 0.00 0.00 0.00 2.24
3472 10266 3.449377 CACAAACCAAACAACCCCTTAGT 59.551 43.478 0.00 0.00 0.00 2.24
3473 10267 3.702045 TCACAAACCAAACAACCCCTTAG 59.298 43.478 0.00 0.00 0.00 2.18
3474 10268 3.709587 TCACAAACCAAACAACCCCTTA 58.290 40.909 0.00 0.00 0.00 2.69
3475 10269 2.541466 TCACAAACCAAACAACCCCTT 58.459 42.857 0.00 0.00 0.00 3.95
3476 10270 2.239681 TCACAAACCAAACAACCCCT 57.760 45.000 0.00 0.00 0.00 4.79
3477 10271 2.432510 TGATCACAAACCAAACAACCCC 59.567 45.455 0.00 0.00 0.00 4.95
3478 10272 3.810310 TGATCACAAACCAAACAACCC 57.190 42.857 0.00 0.00 0.00 4.11
3479 10273 4.754322 AGTTGATCACAAACCAAACAACC 58.246 39.130 0.00 0.00 37.77 3.77
3480 10274 6.533185 CAAAGTTGATCACAAACCAAACAAC 58.467 36.000 0.00 0.00 37.77 3.32
3481 10275 5.121454 GCAAAGTTGATCACAAACCAAACAA 59.879 36.000 0.00 0.00 37.77 2.83
3482 10276 4.629200 GCAAAGTTGATCACAAACCAAACA 59.371 37.500 0.00 0.00 37.77 2.83
3483 10277 4.033932 GGCAAAGTTGATCACAAACCAAAC 59.966 41.667 0.00 0.00 37.77 2.93
3484 10278 4.187694 GGCAAAGTTGATCACAAACCAAA 58.812 39.130 0.00 0.00 37.77 3.28
3485 10279 3.196469 TGGCAAAGTTGATCACAAACCAA 59.804 39.130 0.00 0.00 37.77 3.67
3486 10280 2.762887 TGGCAAAGTTGATCACAAACCA 59.237 40.909 0.00 0.00 37.77 3.67
3487 10281 3.451141 TGGCAAAGTTGATCACAAACC 57.549 42.857 0.00 0.00 37.77 3.27
3488 10282 4.270808 CCTTTGGCAAAGTTGATCACAAAC 59.729 41.667 31.68 0.00 37.77 2.93
3489 10283 4.081198 ACCTTTGGCAAAGTTGATCACAAA 60.081 37.500 31.68 0.00 37.77 2.83
3490 10284 3.450457 ACCTTTGGCAAAGTTGATCACAA 59.550 39.130 31.68 0.00 36.77 3.33
3491 10285 3.030291 ACCTTTGGCAAAGTTGATCACA 58.970 40.909 31.68 0.20 36.77 3.58
3492 10286 3.733443 ACCTTTGGCAAAGTTGATCAC 57.267 42.857 31.68 0.00 36.77 3.06
3493 10287 4.038642 GGTAACCTTTGGCAAAGTTGATCA 59.961 41.667 31.68 12.69 36.77 2.92
3494 10288 4.038642 TGGTAACCTTTGGCAAAGTTGATC 59.961 41.667 31.68 17.06 36.77 2.92
3495 10289 3.964031 TGGTAACCTTTGGCAAAGTTGAT 59.036 39.130 31.68 18.01 36.77 2.57
3496 10290 3.131400 GTGGTAACCTTTGGCAAAGTTGA 59.869 43.478 31.68 14.27 36.77 3.18
3497 10291 3.118956 TGTGGTAACCTTTGGCAAAGTTG 60.119 43.478 31.68 22.18 36.77 3.16
3498 10292 3.100671 TGTGGTAACCTTTGGCAAAGTT 58.899 40.909 31.68 26.33 36.77 2.66
3499 10293 2.429250 GTGTGGTAACCTTTGGCAAAGT 59.571 45.455 31.68 20.23 36.77 2.66
3500 10294 2.223947 GGTGTGGTAACCTTTGGCAAAG 60.224 50.000 28.79 28.79 37.24 2.77
3501 10295 1.757699 GGTGTGGTAACCTTTGGCAAA 59.242 47.619 12.79 12.79 37.24 3.68
3502 10296 1.404843 GGTGTGGTAACCTTTGGCAA 58.595 50.000 0.00 0.00 37.24 4.52
3503 10297 3.119225 GGTGTGGTAACCTTTGGCA 57.881 52.632 0.00 0.00 37.24 4.92
3510 10304 4.212143 CCTAACCTTAGGTGTGGTAACC 57.788 50.000 3.99 0.00 44.26 2.85
3524 10318 9.528489 TCTAAGTTGATTAAATTTGCCTAACCT 57.472 29.630 0.00 0.00 0.00 3.50
3529 10323 9.247861 ACTCATCTAAGTTGATTAAATTTGCCT 57.752 29.630 0.00 0.00 0.00 4.75
3530 10324 9.294030 CACTCATCTAAGTTGATTAAATTTGCC 57.706 33.333 0.00 0.00 0.00 4.52
3531 10325 9.846248 ACACTCATCTAAGTTGATTAAATTTGC 57.154 29.630 0.00 0.00 0.00 3.68
3536 10330 9.349713 ACCAAACACTCATCTAAGTTGATTAAA 57.650 29.630 0.00 0.00 0.00 1.52
3537 10331 8.918202 ACCAAACACTCATCTAAGTTGATTAA 57.082 30.769 0.00 0.00 0.00 1.40
3538 10332 8.918202 AACCAAACACTCATCTAAGTTGATTA 57.082 30.769 0.00 0.00 0.00 1.75
3539 10333 7.502226 TGAACCAAACACTCATCTAAGTTGATT 59.498 33.333 0.00 0.00 0.00 2.57
3540 10334 6.998074 TGAACCAAACACTCATCTAAGTTGAT 59.002 34.615 0.00 0.00 0.00 2.57
3541 10335 6.353323 TGAACCAAACACTCATCTAAGTTGA 58.647 36.000 0.00 0.00 0.00 3.18
3542 10336 6.618287 TGAACCAAACACTCATCTAAGTTG 57.382 37.500 0.00 0.00 0.00 3.16
3543 10337 6.238759 GCTTGAACCAAACACTCATCTAAGTT 60.239 38.462 0.00 0.00 0.00 2.66
3544 10338 5.239525 GCTTGAACCAAACACTCATCTAAGT 59.760 40.000 0.00 0.00 0.00 2.24
3545 10339 5.335191 GGCTTGAACCAAACACTCATCTAAG 60.335 44.000 0.00 0.00 0.00 2.18
3546 10340 4.518970 GGCTTGAACCAAACACTCATCTAA 59.481 41.667 0.00 0.00 0.00 2.10
3547 10341 4.072131 GGCTTGAACCAAACACTCATCTA 58.928 43.478 0.00 0.00 0.00 1.98
3548 10342 2.887152 GGCTTGAACCAAACACTCATCT 59.113 45.455 0.00 0.00 0.00 2.90
3549 10343 2.622942 TGGCTTGAACCAAACACTCATC 59.377 45.455 0.00 0.00 36.55 2.92
3550 10344 2.362077 GTGGCTTGAACCAAACACTCAT 59.638 45.455 0.00 0.00 42.70 2.90
3551 10345 1.748493 GTGGCTTGAACCAAACACTCA 59.252 47.619 0.00 0.00 42.70 3.41
3552 10346 1.748493 TGTGGCTTGAACCAAACACTC 59.252 47.619 12.25 0.00 42.70 3.51
3553 10347 1.476488 GTGTGGCTTGAACCAAACACT 59.524 47.619 0.00 0.00 45.87 3.55
3554 10348 1.921243 GTGTGGCTTGAACCAAACAC 58.079 50.000 0.00 0.00 45.87 3.32
3556 10350 1.111277 AGGTGTGGCTTGAACCAAAC 58.889 50.000 0.00 0.00 45.86 2.93
3557 10351 1.859302 AAGGTGTGGCTTGAACCAAA 58.141 45.000 0.00 0.00 42.70 3.28
3558 10352 2.738587 TAAGGTGTGGCTTGAACCAA 57.261 45.000 0.00 0.00 42.70 3.67
3559 10353 2.582052 CTTAAGGTGTGGCTTGAACCA 58.418 47.619 0.00 0.00 36.37 3.67
3560 10354 1.269723 GCTTAAGGTGTGGCTTGAACC 59.730 52.381 4.29 0.00 0.00 3.62
3561 10355 1.953686 TGCTTAAGGTGTGGCTTGAAC 59.046 47.619 4.29 0.00 0.00 3.18
3562 10356 2.356665 TGCTTAAGGTGTGGCTTGAA 57.643 45.000 4.29 0.00 0.00 2.69
3563 10357 2.229792 CTTGCTTAAGGTGTGGCTTGA 58.770 47.619 4.29 0.00 0.00 3.02
3564 10358 1.336240 GCTTGCTTAAGGTGTGGCTTG 60.336 52.381 4.29 0.00 0.00 4.01
3565 10359 0.961753 GCTTGCTTAAGGTGTGGCTT 59.038 50.000 4.29 0.00 0.00 4.35
3566 10360 0.895559 GGCTTGCTTAAGGTGTGGCT 60.896 55.000 4.29 0.00 0.00 4.75
3567 10361 1.178534 TGGCTTGCTTAAGGTGTGGC 61.179 55.000 4.29 0.00 0.00 5.01
3568 10362 0.598065 GTGGCTTGCTTAAGGTGTGG 59.402 55.000 4.29 0.00 0.00 4.17
3569 10363 1.001378 GTGTGGCTTGCTTAAGGTGTG 60.001 52.381 4.29 0.00 0.00 3.82
3570 10364 1.133792 AGTGTGGCTTGCTTAAGGTGT 60.134 47.619 4.29 0.00 0.00 4.16
3571 10365 1.609208 AGTGTGGCTTGCTTAAGGTG 58.391 50.000 4.29 0.00 0.00 4.00
3572 10366 2.637872 TCTAGTGTGGCTTGCTTAAGGT 59.362 45.455 4.29 0.00 0.00 3.50
3573 10367 3.265791 CTCTAGTGTGGCTTGCTTAAGG 58.734 50.000 4.29 0.00 0.00 2.69
3574 10368 2.675348 GCTCTAGTGTGGCTTGCTTAAG 59.325 50.000 0.00 0.00 0.00 1.85
3575 10369 2.615493 GGCTCTAGTGTGGCTTGCTTAA 60.615 50.000 0.00 0.00 0.00 1.85
3576 10370 1.066143 GGCTCTAGTGTGGCTTGCTTA 60.066 52.381 0.00 0.00 0.00 3.09
3577 10371 0.322008 GGCTCTAGTGTGGCTTGCTT 60.322 55.000 0.00 0.00 0.00 3.91
3578 10372 1.298014 GGCTCTAGTGTGGCTTGCT 59.702 57.895 0.00 0.00 0.00 3.91
3579 10373 1.746991 GGGCTCTAGTGTGGCTTGC 60.747 63.158 0.00 0.00 33.55 4.01
3580 10374 1.078143 GGGGCTCTAGTGTGGCTTG 60.078 63.158 0.00 0.00 33.55 4.01
3581 10375 1.538876 TGGGGCTCTAGTGTGGCTT 60.539 57.895 0.00 0.00 33.55 4.35
3582 10376 2.122729 TGGGGCTCTAGTGTGGCT 59.877 61.111 0.00 0.00 33.55 4.75
3583 10377 1.915078 ATGTGGGGCTCTAGTGTGGC 61.915 60.000 0.00 0.00 0.00 5.01
3584 10378 0.107508 CATGTGGGGCTCTAGTGTGG 60.108 60.000 0.00 0.00 0.00 4.17
3585 10379 0.107508 CCATGTGGGGCTCTAGTGTG 60.108 60.000 0.00 0.00 0.00 3.82
3586 10380 2.300996 CCATGTGGGGCTCTAGTGT 58.699 57.895 0.00 0.00 0.00 3.55
3595 10389 2.655090 TATGTGTATGCCATGTGGGG 57.345 50.000 0.54 0.00 37.04 4.96
3596 10390 4.998671 TTTTATGTGTATGCCATGTGGG 57.001 40.909 0.54 0.00 40.85 4.61
3597 10391 5.806502 CACTTTTTATGTGTATGCCATGTGG 59.193 40.000 0.00 0.00 38.53 4.17
3598 10392 6.308524 CACACTTTTTATGTGTATGCCATGTG 59.691 38.462 0.00 0.00 45.56 3.21
3599 10393 6.389091 CACACTTTTTATGTGTATGCCATGT 58.611 36.000 0.00 0.00 45.56 3.21
3600 10394 5.806502 CCACACTTTTTATGTGTATGCCATG 59.193 40.000 4.57 0.00 45.56 3.66
3601 10395 5.624281 GCCACACTTTTTATGTGTATGCCAT 60.624 40.000 4.57 0.00 45.56 4.40
3602 10396 4.321601 GCCACACTTTTTATGTGTATGCCA 60.322 41.667 4.57 0.00 45.56 4.92
3603 10397 4.173256 GCCACACTTTTTATGTGTATGCC 58.827 43.478 4.57 0.00 45.56 4.40
3604 10398 4.804108 TGCCACACTTTTTATGTGTATGC 58.196 39.130 4.57 11.26 45.56 3.14
3605 10399 6.676950 TCTTGCCACACTTTTTATGTGTATG 58.323 36.000 4.57 0.00 45.56 2.39
3606 10400 6.892658 TCTTGCCACACTTTTTATGTGTAT 57.107 33.333 4.57 0.00 45.56 2.29
3607 10401 6.892658 ATCTTGCCACACTTTTTATGTGTA 57.107 33.333 4.57 0.00 45.56 2.90
3609 10403 5.634859 GGAATCTTGCCACACTTTTTATGTG 59.365 40.000 0.00 0.00 45.81 3.21
3610 10404 5.279456 GGGAATCTTGCCACACTTTTTATGT 60.279 40.000 0.00 0.00 38.72 2.29
3611 10405 5.047092 AGGGAATCTTGCCACACTTTTTATG 60.047 40.000 3.19 0.00 41.75 1.90
3612 10406 5.086621 AGGGAATCTTGCCACACTTTTTAT 58.913 37.500 3.19 0.00 41.75 1.40
3613 10407 4.479158 AGGGAATCTTGCCACACTTTTTA 58.521 39.130 3.19 0.00 41.75 1.52
3614 10408 3.308401 AGGGAATCTTGCCACACTTTTT 58.692 40.909 3.19 0.00 41.75 1.94
3615 10409 2.962859 AGGGAATCTTGCCACACTTTT 58.037 42.857 3.19 0.00 41.75 2.27
3616 10410 2.683211 AGGGAATCTTGCCACACTTT 57.317 45.000 3.19 0.00 41.75 2.66
3617 10411 2.683211 AAGGGAATCTTGCCACACTT 57.317 45.000 3.19 0.00 41.75 3.16
3618 10412 2.615493 CGTAAGGGAATCTTGCCACACT 60.615 50.000 3.19 0.00 41.75 3.55
3619 10413 1.737793 CGTAAGGGAATCTTGCCACAC 59.262 52.381 3.19 0.00 41.75 3.82
3620 10414 1.948611 GCGTAAGGGAATCTTGCCACA 60.949 52.381 3.19 0.00 41.75 4.17
3621 10415 0.733150 GCGTAAGGGAATCTTGCCAC 59.267 55.000 3.19 0.00 41.75 5.01
3622 10416 0.618458 AGCGTAAGGGAATCTTGCCA 59.382 50.000 3.19 0.00 41.75 4.92
3623 10417 1.401905 CAAGCGTAAGGGAATCTTGCC 59.598 52.381 0.00 0.00 39.23 4.52
3624 10418 2.084546 ACAAGCGTAAGGGAATCTTGC 58.915 47.619 0.00 0.00 38.06 4.01
3625 10419 3.334691 TGACAAGCGTAAGGGAATCTTG 58.665 45.455 0.00 0.00 39.79 3.02
3626 10420 3.695830 TGACAAGCGTAAGGGAATCTT 57.304 42.857 0.00 0.00 39.40 2.40
3627 10421 3.695830 TTGACAAGCGTAAGGGAATCT 57.304 42.857 0.00 0.00 38.28 2.40
3628 10422 4.965119 ATTTGACAAGCGTAAGGGAATC 57.035 40.909 0.00 0.00 38.28 2.52
3629 10423 4.522789 ACAATTTGACAAGCGTAAGGGAAT 59.477 37.500 2.79 0.00 38.28 3.01
3630 10424 3.886505 ACAATTTGACAAGCGTAAGGGAA 59.113 39.130 2.79 0.00 38.28 3.97
3631 10425 3.252215 CACAATTTGACAAGCGTAAGGGA 59.748 43.478 2.79 0.00 38.28 4.20
3632 10426 3.004315 ACACAATTTGACAAGCGTAAGGG 59.996 43.478 2.79 0.00 38.28 3.95
3633 10427 4.024048 AGACACAATTTGACAAGCGTAAGG 60.024 41.667 2.79 0.00 38.28 2.69
3634 10428 5.050091 AGAGACACAATTTGACAAGCGTAAG 60.050 40.000 2.79 0.00 43.44 2.34
3635 10429 4.814234 AGAGACACAATTTGACAAGCGTAA 59.186 37.500 2.79 0.00 0.00 3.18
3636 10430 4.377021 AGAGACACAATTTGACAAGCGTA 58.623 39.130 2.79 0.00 0.00 4.42
3637 10431 3.206150 AGAGACACAATTTGACAAGCGT 58.794 40.909 2.79 0.00 0.00 5.07
3638 10432 3.248363 TGAGAGACACAATTTGACAAGCG 59.752 43.478 2.79 0.00 0.00 4.68
3639 10433 4.818534 TGAGAGACACAATTTGACAAGC 57.181 40.909 2.79 0.00 0.00 4.01
3640 10434 7.306399 GCAAAATGAGAGACACAATTTGACAAG 60.306 37.037 2.79 0.00 34.64 3.16
3641 10435 6.476380 GCAAAATGAGAGACACAATTTGACAA 59.524 34.615 2.79 0.00 34.64 3.18
3642 10436 5.978919 GCAAAATGAGAGACACAATTTGACA 59.021 36.000 2.79 0.00 34.64 3.58
3643 10437 6.211515 AGCAAAATGAGAGACACAATTTGAC 58.788 36.000 2.79 4.65 34.64 3.18
3644 10438 6.395426 AGCAAAATGAGAGACACAATTTGA 57.605 33.333 2.79 0.00 34.64 2.69
3645 10439 8.482429 GTTTAGCAAAATGAGAGACACAATTTG 58.518 33.333 0.00 0.00 35.22 2.32
3646 10440 8.416329 AGTTTAGCAAAATGAGAGACACAATTT 58.584 29.630 0.00 0.00 0.00 1.82
3647 10441 7.945134 AGTTTAGCAAAATGAGAGACACAATT 58.055 30.769 0.00 0.00 0.00 2.32
3648 10442 7.516198 AGTTTAGCAAAATGAGAGACACAAT 57.484 32.000 0.00 0.00 0.00 2.71
3649 10443 6.942532 AGTTTAGCAAAATGAGAGACACAA 57.057 33.333 0.00 0.00 0.00 3.33
3650 10444 8.621532 ATTAGTTTAGCAAAATGAGAGACACA 57.378 30.769 0.00 0.00 0.00 3.72
3651 10445 8.940952 AGATTAGTTTAGCAAAATGAGAGACAC 58.059 33.333 0.00 0.00 0.00 3.67
3652 10446 9.507329 AAGATTAGTTTAGCAAAATGAGAGACA 57.493 29.630 0.00 0.00 0.00 3.41
3660 10454 9.358872 GCTTGCTTAAGATTAGTTTAGCAAAAT 57.641 29.630 6.67 0.00 39.92 1.82
3661 10455 8.576442 AGCTTGCTTAAGATTAGTTTAGCAAAA 58.424 29.630 6.67 0.00 39.92 2.44
3662 10456 8.110860 AGCTTGCTTAAGATTAGTTTAGCAAA 57.889 30.769 6.67 0.00 39.92 3.68
3663 10457 7.687941 AGCTTGCTTAAGATTAGTTTAGCAA 57.312 32.000 6.67 9.05 38.47 3.91
3664 10458 7.362056 CCAAGCTTGCTTAAGATTAGTTTAGCA 60.362 37.037 21.43 0.00 0.00 3.49
3665 10459 6.969473 CCAAGCTTGCTTAAGATTAGTTTAGC 59.031 38.462 21.43 2.63 0.00 3.09
3666 10460 6.969473 GCCAAGCTTGCTTAAGATTAGTTTAG 59.031 38.462 21.43 2.17 0.00 1.85
3667 10461 6.432783 TGCCAAGCTTGCTTAAGATTAGTTTA 59.567 34.615 21.43 0.00 0.00 2.01
3668 10462 5.243730 TGCCAAGCTTGCTTAAGATTAGTTT 59.756 36.000 21.43 1.35 0.00 2.66
3669 10463 4.766891 TGCCAAGCTTGCTTAAGATTAGTT 59.233 37.500 21.43 0.00 0.00 2.24
3670 10464 4.335416 TGCCAAGCTTGCTTAAGATTAGT 58.665 39.130 21.43 0.00 0.00 2.24
3671 10465 4.970662 TGCCAAGCTTGCTTAAGATTAG 57.029 40.909 21.43 4.37 0.00 1.73
3672 10466 5.720371 TTTGCCAAGCTTGCTTAAGATTA 57.280 34.783 21.43 0.00 0.00 1.75
3673 10467 4.605640 TTTGCCAAGCTTGCTTAAGATT 57.394 36.364 21.43 0.00 0.00 2.40
3674 10468 4.605640 TTTTGCCAAGCTTGCTTAAGAT 57.394 36.364 21.43 0.00 0.00 2.40
3675 10469 4.399004 TTTTTGCCAAGCTTGCTTAAGA 57.601 36.364 21.43 7.65 0.00 2.10
3676 10470 4.512571 ACATTTTTGCCAAGCTTGCTTAAG 59.487 37.500 21.43 8.08 0.00 1.85
3677 10471 4.272991 CACATTTTTGCCAAGCTTGCTTAA 59.727 37.500 21.43 11.86 0.00 1.85
3678 10472 3.808726 CACATTTTTGCCAAGCTTGCTTA 59.191 39.130 21.43 6.19 0.00 3.09
3679 10473 2.614983 CACATTTTTGCCAAGCTTGCTT 59.385 40.909 21.43 1.55 0.00 3.91
3680 10474 2.215196 CACATTTTTGCCAAGCTTGCT 58.785 42.857 21.43 0.00 0.00 3.91
3681 10475 1.941975 ACACATTTTTGCCAAGCTTGC 59.058 42.857 21.43 16.17 0.00 4.01
3682 10476 2.288458 CCACACATTTTTGCCAAGCTTG 59.712 45.455 19.93 19.93 0.00 4.01
3683 10477 2.563702 CCACACATTTTTGCCAAGCTT 58.436 42.857 0.00 0.00 0.00 3.74
3684 10478 1.811176 GCCACACATTTTTGCCAAGCT 60.811 47.619 0.00 0.00 0.00 3.74
3685 10479 0.587768 GCCACACATTTTTGCCAAGC 59.412 50.000 0.00 0.00 0.00 4.01
3686 10480 1.950828 TGCCACACATTTTTGCCAAG 58.049 45.000 0.00 0.00 0.00 3.61
3687 10481 2.408271 TTGCCACACATTTTTGCCAA 57.592 40.000 0.00 0.00 0.00 4.52
3688 10482 2.219458 CATTGCCACACATTTTTGCCA 58.781 42.857 0.00 0.00 0.00 4.92
3689 10483 1.069091 GCATTGCCACACATTTTTGCC 60.069 47.619 0.00 0.00 0.00 4.52
3690 10484 1.602851 TGCATTGCCACACATTTTTGC 59.397 42.857 6.12 0.00 0.00 3.68
3691 10485 3.304123 CCTTGCATTGCCACACATTTTTG 60.304 43.478 6.12 0.00 0.00 2.44
3692 10486 2.879646 CCTTGCATTGCCACACATTTTT 59.120 40.909 6.12 0.00 0.00 1.94
3693 10487 2.496111 CCTTGCATTGCCACACATTTT 58.504 42.857 6.12 0.00 0.00 1.82
3694 10488 1.878948 GCCTTGCATTGCCACACATTT 60.879 47.619 6.12 0.00 0.00 2.32
3695 10489 0.320946 GCCTTGCATTGCCACACATT 60.321 50.000 6.12 0.00 0.00 2.71
3696 10490 1.294138 GCCTTGCATTGCCACACAT 59.706 52.632 6.12 0.00 0.00 3.21
3697 10491 2.735883 GCCTTGCATTGCCACACA 59.264 55.556 6.12 0.00 0.00 3.72
3703 10497 0.457443 GGTTCTAGGCCTTGCATTGC 59.543 55.000 12.58 0.46 0.00 3.56
3704 10498 1.838112 TGGTTCTAGGCCTTGCATTG 58.162 50.000 12.58 0.00 0.00 2.82
3705 10499 2.562738 GTTTGGTTCTAGGCCTTGCATT 59.437 45.455 12.58 0.00 0.00 3.56
3706 10500 2.171003 GTTTGGTTCTAGGCCTTGCAT 58.829 47.619 12.58 0.00 0.00 3.96
3707 10501 1.133637 TGTTTGGTTCTAGGCCTTGCA 60.134 47.619 12.58 0.00 0.00 4.08
3708 10502 1.541588 CTGTTTGGTTCTAGGCCTTGC 59.458 52.381 12.58 0.00 0.00 4.01
3709 10503 1.541588 GCTGTTTGGTTCTAGGCCTTG 59.458 52.381 12.58 9.98 0.00 3.61
3710 10504 1.547901 GGCTGTTTGGTTCTAGGCCTT 60.548 52.381 12.58 0.00 35.73 4.35
3711 10505 0.038310 GGCTGTTTGGTTCTAGGCCT 59.962 55.000 11.78 11.78 35.73 5.19
3712 10506 0.965866 GGGCTGTTTGGTTCTAGGCC 60.966 60.000 0.00 0.00 46.53 5.19
3713 10507 0.965866 GGGGCTGTTTGGTTCTAGGC 60.966 60.000 0.00 0.00 35.24 3.93
3714 10508 0.698818 AGGGGCTGTTTGGTTCTAGG 59.301 55.000 0.00 0.00 0.00 3.02
3715 10509 3.263425 TCTTAGGGGCTGTTTGGTTCTAG 59.737 47.826 0.00 0.00 0.00 2.43
3716 10510 3.253220 TCTTAGGGGCTGTTTGGTTCTA 58.747 45.455 0.00 0.00 0.00 2.10
3717 10511 2.062636 TCTTAGGGGCTGTTTGGTTCT 58.937 47.619 0.00 0.00 0.00 3.01
3718 10512 2.579410 TCTTAGGGGCTGTTTGGTTC 57.421 50.000 0.00 0.00 0.00 3.62
3719 10513 3.542969 AATCTTAGGGGCTGTTTGGTT 57.457 42.857 0.00 0.00 0.00 3.67
3720 10514 3.542969 AAATCTTAGGGGCTGTTTGGT 57.457 42.857 0.00 0.00 0.00 3.67
3721 10515 4.890158 AAAAATCTTAGGGGCTGTTTGG 57.110 40.909 0.00 0.00 0.00 3.28
3755 10549 5.626142 TCCATGTAGCTTAGTTTTGGAACA 58.374 37.500 0.00 0.00 38.26 3.18
3756 10550 6.569179 TTCCATGTAGCTTAGTTTTGGAAC 57.431 37.500 0.00 0.00 36.98 3.62
3757 10551 7.001674 TCTTTCCATGTAGCTTAGTTTTGGAA 58.998 34.615 0.00 0.19 39.36 3.53
3758 10552 6.539173 TCTTTCCATGTAGCTTAGTTTTGGA 58.461 36.000 0.00 0.00 0.00 3.53
3775 10569 1.146774 TGGGCCACTTGATTCTTTCCA 59.853 47.619 0.00 0.00 0.00 3.53
3785 10579 0.676466 TATGCTCGTTGGGCCACTTG 60.676 55.000 5.23 0.00 0.00 3.16
3786 10580 0.392998 CTATGCTCGTTGGGCCACTT 60.393 55.000 5.23 0.00 0.00 3.16
3789 10583 2.124736 GCTATGCTCGTTGGGCCA 60.125 61.111 0.00 0.00 0.00 5.36
3798 10592 2.202878 TTCCCGTGCGCTATGCTC 60.203 61.111 9.73 0.00 46.63 4.26
3836 10630 6.703607 CACATCTACTATAGAAAGGTTGCTGG 59.296 42.308 6.78 0.00 38.50 4.85
3868 10662 5.048083 GCTAACATGACCAGAAAACCATGAA 60.048 40.000 0.00 0.00 38.83 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.