Multiple sequence alignment - TraesCS4D01G016200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G016200 chr4D 100.000 2707 0 0 1 2707 7408439 7411145 0.000000e+00 5000.0
1 TraesCS4D01G016200 chr4D 86.364 88 12 0 2521 2608 503564369 503564456 2.220000e-16 97.1
2 TraesCS4D01G016200 chr4B 88.821 1798 114 44 209 1971 13276621 13278366 0.000000e+00 2126.0
3 TraesCS4D01G016200 chr4B 86.697 218 20 4 1 215 13232617 13232828 1.620000e-57 233.0
4 TraesCS4D01G016200 chr4B 92.045 88 6 1 2611 2697 13278591 13278678 3.660000e-24 122.0
5 TraesCS4D01G016200 chr4A 86.439 1261 86 48 660 1887 596239568 596238360 0.000000e+00 1303.0
6 TraesCS4D01G016200 chr4A 89.734 1052 59 25 732 1757 596214781 596215809 0.000000e+00 1299.0
7 TraesCS4D01G016200 chr4A 90.972 720 51 11 660 1372 596207732 596208444 0.000000e+00 957.0
8 TraesCS4D01G016200 chr4A 90.972 720 51 11 660 1372 596211379 596212091 0.000000e+00 957.0
9 TraesCS4D01G016200 chr4A 89.971 678 41 12 700 1372 596204141 596204796 0.000000e+00 850.0
10 TraesCS4D01G016200 chr4A 94.048 252 10 3 285 531 596211027 596211278 7.070000e-101 377.0
11 TraesCS4D01G016200 chr4A 93.651 252 11 3 285 531 596207380 596207631 3.290000e-99 372.0
12 TraesCS4D01G016200 chr4A 88.281 256 25 2 6 257 596243065 596242811 4.380000e-78 302.0
13 TraesCS4D01G016200 chr4A 91.925 161 7 3 285 439 596239855 596239695 1.260000e-53 220.0
14 TraesCS4D01G016200 chr4A 80.723 166 24 5 2450 2614 484862151 484862309 3.660000e-24 122.0
15 TraesCS4D01G016200 chr4A 94.737 57 3 0 2554 2610 582438983 582438927 3.710000e-14 89.8
16 TraesCS4D01G016200 chr5B 83.523 176 22 4 2431 2606 680812475 680812307 1.000000e-34 158.0
17 TraesCS4D01G016200 chr2B 82.418 182 19 4 2441 2610 495146741 495146561 2.170000e-31 147.0
18 TraesCS4D01G016200 chr3D 77.510 249 48 8 2172 2415 67724699 67724454 2.810000e-30 143.0
19 TraesCS4D01G016200 chr3D 79.670 182 29 6 2170 2347 433564300 433564123 1.020000e-24 124.0
20 TraesCS4D01G016200 chr1A 82.927 164 23 5 2169 2330 523109704 523109864 2.810000e-30 143.0
21 TraesCS4D01G016200 chr6D 81.481 189 19 5 2437 2612 457640543 457640728 1.010000e-29 141.0
22 TraesCS4D01G016200 chr7B 85.106 141 15 4 2441 2575 679591159 679591299 3.630000e-29 139.0
23 TraesCS4D01G016200 chr3B 81.176 170 28 4 2172 2339 114100222 114100389 1.690000e-27 134.0
24 TraesCS4D01G016200 chr3B 80.606 165 17 6 2445 2608 796512115 796511965 2.200000e-21 113.0
25 TraesCS4D01G016200 chr2A 80.899 178 26 7 2174 2347 24118818 24118991 1.690000e-27 134.0
26 TraesCS4D01G016200 chr2A 80.469 128 19 4 2441 2562 12249014 12248887 2.870000e-15 93.5
27 TraesCS4D01G016200 chr2D 80.226 177 31 4 2173 2347 558801358 558801532 2.190000e-26 130.0
28 TraesCS4D01G016200 chr2D 77.439 164 23 7 2465 2618 112917402 112917561 4.800000e-13 86.1
29 TraesCS4D01G016200 chr6B 80.952 168 27 5 2174 2339 536831173 536831337 7.870000e-26 128.0
30 TraesCS4D01G016200 chr6B 80.000 175 33 2 2174 2347 634977504 634977677 7.870000e-26 128.0
31 TraesCS4D01G016200 chr6B 80.226 177 27 6 2167 2339 497258549 497258377 2.830000e-25 126.0
32 TraesCS4D01G016200 chr5A 78.155 206 28 8 2427 2618 469108042 469107840 6.120000e-22 115.0
33 TraesCS4D01G016200 chrUn 86.735 98 10 3 2427 2523 95294213 95294308 3.690000e-19 106.0
34 TraesCS4D01G016200 chrUn 88.095 84 9 1 2527 2609 126990304 126990221 6.170000e-17 99.0
35 TraesCS4D01G016200 chr5D 78.125 192 25 9 2437 2614 9531921 9531733 3.690000e-19 106.0
36 TraesCS4D01G016200 chr7D 87.209 86 9 2 2441 2525 595523637 595523553 2.220000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G016200 chr4D 7408439 7411145 2706 False 5000.000000 5000 100.000000 1 2707 1 chr4D.!!$F1 2706
1 TraesCS4D01G016200 chr4B 13276621 13278678 2057 False 1124.000000 2126 90.433000 209 2697 2 chr4B.!!$F2 2488
2 TraesCS4D01G016200 chr4A 596204141 596215809 11668 False 802.000000 1299 91.558000 285 1757 6 chr4A.!!$F2 1472
3 TraesCS4D01G016200 chr4A 596238360 596243065 4705 True 608.333333 1303 88.881667 6 1887 3 chr4A.!!$R2 1881

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
783 7414 0.538057 CTCTGGGAAAAGCAGTGGCA 60.538 55.0 0.0 0.0 44.61 4.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2033 12039 0.030638 CTGTTTTGTGGCTTGTCGGG 59.969 55.0 0.0 0.0 0.0 5.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 6.527423 ACATGAGTTCTAAGTTTCGGGTTTA 58.473 36.000 0.00 0.00 0.00 2.01
30 31 6.527423 TGAGTTCTAAGTTTCGGGTTTACAT 58.473 36.000 0.00 0.00 0.00 2.29
105 106 7.865706 AGGTTAAAAGCTACATGAATCGATT 57.134 32.000 11.20 11.20 34.49 3.34
106 107 7.697691 AGGTTAAAAGCTACATGAATCGATTG 58.302 34.615 16.96 4.53 34.49 2.67
122 123 8.397906 TGAATCGATTGTTTGTCTTCCATTATC 58.602 33.333 16.96 0.00 0.00 1.75
123 124 7.864108 ATCGATTGTTTGTCTTCCATTATCA 57.136 32.000 0.00 0.00 0.00 2.15
166 167 5.930569 TGATGAATGAATTAGAGATCCAGCG 59.069 40.000 0.00 0.00 0.00 5.18
199 200 2.159382 CACCACTTCCCGCATAACTTT 58.841 47.619 0.00 0.00 0.00 2.66
200 201 2.556622 CACCACTTCCCGCATAACTTTT 59.443 45.455 0.00 0.00 0.00 2.27
201 202 3.754323 CACCACTTCCCGCATAACTTTTA 59.246 43.478 0.00 0.00 0.00 1.52
207 208 4.497291 TCCCGCATAACTTTTAGGTGAT 57.503 40.909 0.00 0.00 0.00 3.06
242 247 3.857052 TGTTAGCTCCACGAATTTCGAT 58.143 40.909 24.50 6.90 43.74 3.59
248 253 5.223382 AGCTCCACGAATTTCGATATACAG 58.777 41.667 24.50 11.60 43.74 2.74
262 267 0.678395 ATACAGAGGCTGAGGCGATG 59.322 55.000 10.94 10.94 39.81 3.84
355 6964 6.471233 AGAATAGAATTCGACCATGAGTCA 57.529 37.500 12.80 0.00 46.69 3.41
476 7091 1.934589 CACGACCTTGAGTCACACAA 58.065 50.000 0.00 0.00 46.69 3.33
541 7156 6.734532 TCCCTACTTCATTAGTACAGTACCA 58.265 40.000 7.13 0.00 38.33 3.25
713 7341 0.596083 CTCTGATGCACGATCCGTCC 60.596 60.000 0.00 0.00 38.32 4.79
720 7348 1.813859 CACGATCCGTCCCAGCTAA 59.186 57.895 0.00 0.00 38.32 3.09
783 7414 0.538057 CTCTGGGAAAAGCAGTGGCA 60.538 55.000 0.00 0.00 44.61 4.92
978 10937 4.660938 AAGCCCGGCCAGTTCACC 62.661 66.667 5.55 0.00 0.00 4.02
999 10962 0.469494 CGATCATCATCCACCCACCA 59.531 55.000 0.00 0.00 0.00 4.17
1005 10968 1.000739 CATCCACCCACCAATGGCT 59.999 57.895 0.00 0.00 45.76 4.75
1036 10999 3.621394 GCGGCATCTCGTTCTCGC 61.621 66.667 0.00 0.00 36.96 5.03
1170 11142 4.687215 GTGCAGGCCTCGCTGTCA 62.687 66.667 22.36 5.93 0.00 3.58
1367 11339 2.202623 CGCCTGCTCTGGTACGTC 60.203 66.667 0.00 0.00 0.00 4.34
1372 11344 0.817654 CTGCTCTGGTACGTCCATGA 59.182 55.000 7.11 6.60 46.12 3.07
1373 11345 0.530744 TGCTCTGGTACGTCCATGAC 59.469 55.000 7.11 0.00 46.12 3.06
1374 11346 0.530744 GCTCTGGTACGTCCATGACA 59.469 55.000 7.11 0.00 46.12 3.58
1375 11347 1.137086 GCTCTGGTACGTCCATGACAT 59.863 52.381 7.11 0.00 46.12 3.06
1376 11348 2.814269 CTCTGGTACGTCCATGACATG 58.186 52.381 8.56 8.56 46.12 3.21
1379 11351 4.211920 TCTGGTACGTCCATGACATGATA 58.788 43.478 17.24 1.74 46.12 2.15
1405 11387 5.645497 ACATGTAGAAAAACTGAGATGGAGC 59.355 40.000 0.00 0.00 0.00 4.70
1408 11390 4.008074 AGAAAAACTGAGATGGAGCGAA 57.992 40.909 0.00 0.00 0.00 4.70
1430 11412 4.073293 AGTGACTAACCACTTCTGTTGG 57.927 45.455 0.00 0.00 44.32 3.77
1451 11433 4.612536 GTGCGTGTGTGTGCAGCC 62.613 66.667 0.00 0.00 42.68 4.85
1532 11514 2.532256 GCCTACTGATGCTGCTGCG 61.532 63.158 11.21 0.00 43.34 5.18
1721 11715 7.489435 TCTGTTTTCTGATCTCGTTATGTGATC 59.511 37.037 8.93 8.93 44.28 2.92
1723 11717 4.489679 TCTGATCTCGTTATGTGATCCG 57.510 45.455 12.21 7.51 43.69 4.18
1726 11720 1.037493 TCTCGTTATGTGATCCGGGG 58.963 55.000 0.00 0.00 0.00 5.73
1728 11722 1.046472 TCGTTATGTGATCCGGGGCT 61.046 55.000 0.00 0.00 0.00 5.19
1729 11723 0.179056 CGTTATGTGATCCGGGGCTT 60.179 55.000 0.00 0.00 0.00 4.35
1731 11725 0.916086 TTATGTGATCCGGGGCTTGT 59.084 50.000 0.00 0.00 0.00 3.16
1774 11772 0.183492 ATGGATGTGCCGCCTGTTAT 59.817 50.000 0.00 0.00 40.66 1.89
1776 11774 1.102978 GGATGTGCCGCCTGTTATTT 58.897 50.000 0.00 0.00 0.00 1.40
1777 11775 2.294074 GGATGTGCCGCCTGTTATTTA 58.706 47.619 0.00 0.00 0.00 1.40
1780 11778 0.375803 GTGCCGCCTGTTATTTACGG 59.624 55.000 0.00 0.00 46.50 4.02
1781 11779 0.249676 TGCCGCCTGTTATTTACGGA 59.750 50.000 3.58 0.00 46.71 4.69
1782 11780 0.935196 GCCGCCTGTTATTTACGGAG 59.065 55.000 3.58 0.00 46.71 4.63
1783 11781 1.741394 GCCGCCTGTTATTTACGGAGT 60.741 52.381 3.58 0.00 46.71 3.85
1784 11782 2.481795 GCCGCCTGTTATTTACGGAGTA 60.482 50.000 3.58 0.00 46.71 2.59
1786 11784 3.985925 CCGCCTGTTATTTACGGAGTATC 59.014 47.826 0.00 0.00 45.21 2.24
1787 11785 4.500205 CCGCCTGTTATTTACGGAGTATCA 60.500 45.833 0.00 0.00 45.21 2.15
1788 11786 4.680110 CGCCTGTTATTTACGGAGTATCAG 59.320 45.833 0.00 0.00 45.21 2.90
1800 11798 3.629855 CGGAGTATCAGTGAGTCTGTCAT 59.370 47.826 0.00 0.00 43.97 3.06
1824 11822 1.239296 TTGCTCCACTGCACATCAGC 61.239 55.000 0.00 0.00 46.76 4.26
1826 11824 1.030488 GCTCCACTGCACATCAGCAT 61.030 55.000 0.00 0.00 46.76 3.79
1835 11833 2.227149 TGCACATCAGCATTGTGACTTC 59.773 45.455 15.30 1.60 45.83 3.01
1837 11835 3.425892 GCACATCAGCATTGTGACTTCTC 60.426 47.826 15.30 0.00 45.83 2.87
1842 11840 6.712095 ACATCAGCATTGTGACTTCTCTTTAA 59.288 34.615 0.00 0.00 0.00 1.52
1846 11844 6.149973 CAGCATTGTGACTTCTCTTTAATGGA 59.850 38.462 0.00 0.00 0.00 3.41
1848 11846 7.066766 AGCATTGTGACTTCTCTTTAATGGATC 59.933 37.037 0.00 0.00 0.00 3.36
1853 11857 9.383519 TGTGACTTCTCTTTAATGGATCATTAC 57.616 33.333 0.00 0.00 36.26 1.89
1861 11865 7.369434 TCTTTAATGGATCATTACCCCCAATT 58.631 34.615 0.00 0.00 36.26 2.32
1871 11875 2.514458 ACCCCCAATTCACATCAGAC 57.486 50.000 0.00 0.00 0.00 3.51
1891 11895 1.092921 TTGTCACTTGGTGGTGCGAC 61.093 55.000 0.00 0.00 37.16 5.19
1896 11902 1.398041 CACTTGGTGGTGCGACATATG 59.602 52.381 0.00 0.00 0.00 1.78
1927 11933 5.686771 GCTTTTGCAACGAGGAATTAATC 57.313 39.130 0.00 0.00 46.58 1.75
1928 11934 5.402398 GCTTTTGCAACGAGGAATTAATCT 58.598 37.500 0.00 0.00 46.58 2.40
1938 11944 4.034510 CGAGGAATTAATCTCACTTGGTGC 59.965 45.833 5.34 0.00 32.98 5.01
1939 11945 5.184892 AGGAATTAATCTCACTTGGTGCT 57.815 39.130 0.00 0.00 32.98 4.40
1966 11972 3.062466 CGTCTCACGGAGCTGGGA 61.062 66.667 0.00 0.00 38.08 4.37
1971 11977 2.124570 CACGGAGCTGGGAATGGG 60.125 66.667 0.00 0.00 0.00 4.00
1972 11978 3.411517 ACGGAGCTGGGAATGGGG 61.412 66.667 0.00 0.00 0.00 4.96
1973 11979 4.883354 CGGAGCTGGGAATGGGGC 62.883 72.222 0.00 0.00 0.00 5.80
1974 11980 3.424105 GGAGCTGGGAATGGGGCT 61.424 66.667 0.00 0.00 37.77 5.19
1975 11981 2.194326 GAGCTGGGAATGGGGCTC 59.806 66.667 0.00 0.00 43.07 4.70
1976 11982 3.424105 AGCTGGGAATGGGGCTCC 61.424 66.667 0.00 0.00 0.00 4.70
1977 11983 3.424105 GCTGGGAATGGGGCTCCT 61.424 66.667 3.07 0.00 33.11 3.69
1978 11984 2.599597 CTGGGAATGGGGCTCCTG 59.400 66.667 3.07 0.00 33.11 3.86
1979 11985 2.002977 CTGGGAATGGGGCTCCTGA 61.003 63.158 3.07 0.00 33.11 3.86
1980 11986 1.543642 TGGGAATGGGGCTCCTGAA 60.544 57.895 3.07 0.00 33.11 3.02
1981 11987 0.925720 TGGGAATGGGGCTCCTGAAT 60.926 55.000 3.07 0.00 33.11 2.57
1982 11988 0.178978 GGGAATGGGGCTCCTGAATC 60.179 60.000 3.07 0.00 33.11 2.52
1983 11989 0.536006 GGAATGGGGCTCCTGAATCG 60.536 60.000 3.07 0.00 0.00 3.34
1984 11990 0.181350 GAATGGGGCTCCTGAATCGT 59.819 55.000 3.07 0.00 0.00 3.73
1985 11991 0.625849 AATGGGGCTCCTGAATCGTT 59.374 50.000 3.07 0.00 0.00 3.85
1986 11992 0.107017 ATGGGGCTCCTGAATCGTTG 60.107 55.000 3.07 0.00 0.00 4.10
1987 11993 1.299976 GGGGCTCCTGAATCGTTGT 59.700 57.895 0.00 0.00 0.00 3.32
1988 11994 0.744771 GGGGCTCCTGAATCGTTGTC 60.745 60.000 0.00 0.00 0.00 3.18
1989 11995 0.036388 GGGCTCCTGAATCGTTGTCA 60.036 55.000 0.00 0.00 0.00 3.58
1990 11996 1.407437 GGGCTCCTGAATCGTTGTCAT 60.407 52.381 0.00 0.00 0.00 3.06
1991 11997 1.667724 GGCTCCTGAATCGTTGTCATG 59.332 52.381 0.00 0.00 0.00 3.07
1992 11998 2.350522 GCTCCTGAATCGTTGTCATGT 58.649 47.619 0.00 0.00 0.00 3.21
1993 11999 2.094894 GCTCCTGAATCGTTGTCATGTG 59.905 50.000 0.00 0.00 0.00 3.21
1994 12000 2.076100 TCCTGAATCGTTGTCATGTGC 58.924 47.619 0.00 0.00 0.00 4.57
1995 12001 1.131126 CCTGAATCGTTGTCATGTGCC 59.869 52.381 0.00 0.00 0.00 5.01
1996 12002 1.131126 CTGAATCGTTGTCATGTGCCC 59.869 52.381 0.00 0.00 0.00 5.36
1997 12003 1.271325 TGAATCGTTGTCATGTGCCCT 60.271 47.619 0.00 0.00 0.00 5.19
1998 12004 2.027653 TGAATCGTTGTCATGTGCCCTA 60.028 45.455 0.00 0.00 0.00 3.53
1999 12005 2.779755 ATCGTTGTCATGTGCCCTAA 57.220 45.000 0.00 0.00 0.00 2.69
2000 12006 1.803334 TCGTTGTCATGTGCCCTAAC 58.197 50.000 0.00 0.00 0.00 2.34
2001 12007 1.070914 TCGTTGTCATGTGCCCTAACA 59.929 47.619 0.00 0.00 0.00 2.41
2002 12008 1.464608 CGTTGTCATGTGCCCTAACAG 59.535 52.381 0.00 0.00 32.52 3.16
2003 12009 2.504367 GTTGTCATGTGCCCTAACAGT 58.496 47.619 0.00 0.00 32.52 3.55
2004 12010 2.183478 TGTCATGTGCCCTAACAGTG 57.817 50.000 0.00 0.00 32.52 3.66
2005 12011 1.419762 TGTCATGTGCCCTAACAGTGT 59.580 47.619 0.00 0.00 32.52 3.55
2006 12012 2.635427 TGTCATGTGCCCTAACAGTGTA 59.365 45.455 0.00 0.00 32.52 2.90
2007 12013 3.263170 TGTCATGTGCCCTAACAGTGTAT 59.737 43.478 0.00 0.00 32.52 2.29
2008 12014 3.623060 GTCATGTGCCCTAACAGTGTATG 59.377 47.826 0.00 0.00 32.52 2.39
2009 12015 2.779755 TGTGCCCTAACAGTGTATGG 57.220 50.000 0.00 1.55 0.00 2.74
2010 12016 1.280710 TGTGCCCTAACAGTGTATGGG 59.719 52.381 22.45 22.45 40.74 4.00
2011 12017 1.280998 GTGCCCTAACAGTGTATGGGT 59.719 52.381 25.37 3.00 39.97 4.51
2012 12018 1.989586 TGCCCTAACAGTGTATGGGTT 59.010 47.619 25.37 2.35 39.97 4.11
2013 12019 2.026636 TGCCCTAACAGTGTATGGGTTC 60.027 50.000 25.37 15.27 39.97 3.62
2014 12020 2.026636 GCCCTAACAGTGTATGGGTTCA 60.027 50.000 25.37 0.00 39.97 3.18
2015 12021 3.371595 GCCCTAACAGTGTATGGGTTCAT 60.372 47.826 25.37 0.39 39.97 2.57
2016 12022 4.451900 CCCTAACAGTGTATGGGTTCATC 58.548 47.826 19.85 0.00 34.96 2.92
2017 12023 4.080582 CCCTAACAGTGTATGGGTTCATCA 60.081 45.833 19.85 0.00 34.96 3.07
2018 12024 5.118990 CCTAACAGTGTATGGGTTCATCAG 58.881 45.833 0.00 0.00 34.96 2.90
2019 12025 4.908601 AACAGTGTATGGGTTCATCAGA 57.091 40.909 0.00 0.00 34.96 3.27
2020 12026 4.207891 ACAGTGTATGGGTTCATCAGAC 57.792 45.455 0.00 0.00 34.96 3.51
2021 12027 3.582647 ACAGTGTATGGGTTCATCAGACA 59.417 43.478 0.00 0.00 34.50 3.41
2022 12028 4.041567 ACAGTGTATGGGTTCATCAGACAA 59.958 41.667 0.00 0.00 37.95 3.18
2023 12029 5.003160 CAGTGTATGGGTTCATCAGACAAA 58.997 41.667 0.00 0.00 37.95 2.83
2024 12030 5.122869 CAGTGTATGGGTTCATCAGACAAAG 59.877 44.000 0.00 0.00 37.95 2.77
2025 12031 4.009675 TGTATGGGTTCATCAGACAAAGC 58.990 43.478 0.00 0.00 34.05 3.51
2026 12032 2.655090 TGGGTTCATCAGACAAAGCA 57.345 45.000 0.00 0.00 0.00 3.91
2027 12033 2.942804 TGGGTTCATCAGACAAAGCAA 58.057 42.857 0.00 0.00 0.00 3.91
2028 12034 3.295093 TGGGTTCATCAGACAAAGCAAA 58.705 40.909 0.00 0.00 0.00 3.68
2029 12035 3.896888 TGGGTTCATCAGACAAAGCAAAT 59.103 39.130 0.00 0.00 0.00 2.32
2030 12036 4.022068 TGGGTTCATCAGACAAAGCAAATC 60.022 41.667 0.00 0.00 0.00 2.17
2031 12037 4.161333 GGTTCATCAGACAAAGCAAATCG 58.839 43.478 0.00 0.00 0.00 3.34
2032 12038 4.161333 GTTCATCAGACAAAGCAAATCGG 58.839 43.478 0.00 0.00 0.00 4.18
2033 12039 2.162208 TCATCAGACAAAGCAAATCGGC 59.838 45.455 0.00 0.00 0.00 5.54
2034 12040 0.881118 TCAGACAAAGCAAATCGGCC 59.119 50.000 0.00 0.00 0.00 6.13
2035 12041 0.109132 CAGACAAAGCAAATCGGCCC 60.109 55.000 0.00 0.00 0.00 5.80
2036 12042 1.154035 GACAAAGCAAATCGGCCCG 60.154 57.895 0.00 0.00 0.00 6.13
2037 12043 1.582610 GACAAAGCAAATCGGCCCGA 61.583 55.000 8.97 8.97 41.13 5.14
2038 12044 1.154035 CAAAGCAAATCGGCCCGAC 60.154 57.895 8.62 0.00 39.18 4.79
2039 12045 1.602323 AAAGCAAATCGGCCCGACA 60.602 52.632 8.62 0.00 39.18 4.35
2040 12046 1.175983 AAAGCAAATCGGCCCGACAA 61.176 50.000 8.62 0.00 39.18 3.18
2041 12047 1.586154 AAGCAAATCGGCCCGACAAG 61.586 55.000 8.62 1.46 39.18 3.16
2042 12048 2.485122 CAAATCGGCCCGACAAGC 59.515 61.111 8.62 0.00 39.18 4.01
2049 12055 3.124686 GCCCGACAAGCCACAAAA 58.875 55.556 0.00 0.00 0.00 2.44
2050 12056 1.299850 GCCCGACAAGCCACAAAAC 60.300 57.895 0.00 0.00 0.00 2.43
2051 12057 2.010582 GCCCGACAAGCCACAAAACA 62.011 55.000 0.00 0.00 0.00 2.83
2052 12058 0.030638 CCCGACAAGCCACAAAACAG 59.969 55.000 0.00 0.00 0.00 3.16
2053 12059 0.594796 CCGACAAGCCACAAAACAGC 60.595 55.000 0.00 0.00 0.00 4.40
2054 12060 0.100325 CGACAAGCCACAAAACAGCA 59.900 50.000 0.00 0.00 0.00 4.41
2055 12061 1.269206 CGACAAGCCACAAAACAGCAT 60.269 47.619 0.00 0.00 0.00 3.79
2056 12062 2.799207 CGACAAGCCACAAAACAGCATT 60.799 45.455 0.00 0.00 0.00 3.56
2057 12063 2.540931 GACAAGCCACAAAACAGCATTG 59.459 45.455 0.00 0.00 0.00 2.82
2058 12064 1.262151 CAAGCCACAAAACAGCATTGC 59.738 47.619 0.00 0.00 0.00 3.56
2059 12065 0.598158 AGCCACAAAACAGCATTGCG 60.598 50.000 2.38 1.04 0.00 4.85
2060 12066 0.875474 GCCACAAAACAGCATTGCGT 60.875 50.000 2.38 1.70 0.00 5.24
2061 12067 0.854062 CCACAAAACAGCATTGCGTG 59.146 50.000 2.38 4.22 0.00 5.34
2062 12068 1.535649 CCACAAAACAGCATTGCGTGA 60.536 47.619 11.97 0.00 0.00 4.35
2063 12069 2.396601 CACAAAACAGCATTGCGTGAT 58.603 42.857 12.89 1.46 0.00 3.06
2075 12081 3.611433 GCGTGATGCACCTGAATTC 57.389 52.632 0.00 0.00 45.45 2.17
2076 12082 0.247814 GCGTGATGCACCTGAATTCG 60.248 55.000 0.04 0.00 45.45 3.34
2077 12083 1.078709 CGTGATGCACCTGAATTCGT 58.921 50.000 0.04 0.00 0.00 3.85
2078 12084 1.201954 CGTGATGCACCTGAATTCGTG 60.202 52.381 8.61 8.61 0.00 4.35
2079 12085 2.076100 GTGATGCACCTGAATTCGTGA 58.924 47.619 15.22 3.87 31.36 4.35
2080 12086 2.679837 GTGATGCACCTGAATTCGTGAT 59.320 45.455 15.22 7.51 31.36 3.06
2081 12087 3.871006 GTGATGCACCTGAATTCGTGATA 59.129 43.478 15.22 5.79 31.36 2.15
2082 12088 4.025396 GTGATGCACCTGAATTCGTGATAG 60.025 45.833 15.22 0.96 31.36 2.08
2083 12089 3.885724 TGCACCTGAATTCGTGATAGA 57.114 42.857 15.22 0.00 31.36 1.98
2084 12090 3.521560 TGCACCTGAATTCGTGATAGAC 58.478 45.455 15.22 1.11 31.36 2.59
2085 12091 3.195610 TGCACCTGAATTCGTGATAGACT 59.804 43.478 15.22 0.00 31.36 3.24
2086 12092 4.184629 GCACCTGAATTCGTGATAGACTT 58.815 43.478 15.22 0.00 31.36 3.01
2087 12093 4.033358 GCACCTGAATTCGTGATAGACTTG 59.967 45.833 15.22 1.49 31.36 3.16
2088 12094 5.410924 CACCTGAATTCGTGATAGACTTGA 58.589 41.667 7.49 0.00 31.36 3.02
2089 12095 5.869344 CACCTGAATTCGTGATAGACTTGAA 59.131 40.000 7.49 0.00 31.36 2.69
2090 12096 5.869888 ACCTGAATTCGTGATAGACTTGAAC 59.130 40.000 0.04 0.00 0.00 3.18
2091 12097 5.869344 CCTGAATTCGTGATAGACTTGAACA 59.131 40.000 0.04 0.00 0.00 3.18
2092 12098 6.536582 CCTGAATTCGTGATAGACTTGAACAT 59.463 38.462 0.04 0.00 0.00 2.71
2093 12099 7.294676 TGAATTCGTGATAGACTTGAACATG 57.705 36.000 0.04 0.00 0.00 3.21
2094 12100 6.873605 TGAATTCGTGATAGACTTGAACATGT 59.126 34.615 0.04 0.00 0.00 3.21
2095 12101 7.387673 TGAATTCGTGATAGACTTGAACATGTT 59.612 33.333 11.78 11.78 0.00 2.71
2096 12102 6.706055 TTCGTGATAGACTTGAACATGTTC 57.294 37.500 28.10 28.10 39.91 3.18
2097 12103 6.025749 TCGTGATAGACTTGAACATGTTCT 57.974 37.500 32.57 18.66 40.14 3.01
2098 12104 6.455647 TCGTGATAGACTTGAACATGTTCTT 58.544 36.000 32.57 20.04 40.14 2.52
2099 12105 6.929049 TCGTGATAGACTTGAACATGTTCTTT 59.071 34.615 32.57 19.73 40.14 2.52
2100 12106 7.011773 CGTGATAGACTTGAACATGTTCTTTG 58.988 38.462 32.57 24.38 40.14 2.77
2101 12107 6.798959 GTGATAGACTTGAACATGTTCTTTGC 59.201 38.462 32.57 21.23 40.14 3.68
2102 12108 6.712095 TGATAGACTTGAACATGTTCTTTGCT 59.288 34.615 32.57 25.48 40.14 3.91
2103 12109 5.429957 AGACTTGAACATGTTCTTTGCTC 57.570 39.130 32.57 20.70 40.14 4.26
2104 12110 5.128919 AGACTTGAACATGTTCTTTGCTCT 58.871 37.500 32.57 22.13 40.14 4.09
2105 12111 6.291377 AGACTTGAACATGTTCTTTGCTCTA 58.709 36.000 32.57 12.52 40.14 2.43
2106 12112 6.767902 AGACTTGAACATGTTCTTTGCTCTAA 59.232 34.615 32.57 18.16 40.14 2.10
2107 12113 7.283127 AGACTTGAACATGTTCTTTGCTCTAAA 59.717 33.333 32.57 17.56 40.14 1.85
2108 12114 7.945134 ACTTGAACATGTTCTTTGCTCTAAAT 58.055 30.769 32.57 9.17 40.14 1.40
2109 12115 8.416329 ACTTGAACATGTTCTTTGCTCTAAATT 58.584 29.630 32.57 11.81 40.14 1.82
2110 12116 8.801715 TTGAACATGTTCTTTGCTCTAAATTC 57.198 30.769 32.57 7.93 40.14 2.17
2111 12117 7.370383 TGAACATGTTCTTTGCTCTAAATTCC 58.630 34.615 32.57 7.44 40.14 3.01
2112 12118 6.899393 ACATGTTCTTTGCTCTAAATTCCA 57.101 33.333 0.00 0.00 0.00 3.53
2113 12119 7.472334 ACATGTTCTTTGCTCTAAATTCCAT 57.528 32.000 0.00 0.00 0.00 3.41
2114 12120 7.542025 ACATGTTCTTTGCTCTAAATTCCATC 58.458 34.615 0.00 0.00 0.00 3.51
2115 12121 7.177216 ACATGTTCTTTGCTCTAAATTCCATCA 59.823 33.333 0.00 0.00 0.00 3.07
2116 12122 7.523293 TGTTCTTTGCTCTAAATTCCATCAA 57.477 32.000 0.00 0.00 0.00 2.57
2117 12123 7.950512 TGTTCTTTGCTCTAAATTCCATCAAA 58.049 30.769 0.00 0.00 0.00 2.69
2118 12124 8.420222 TGTTCTTTGCTCTAAATTCCATCAAAA 58.580 29.630 0.00 0.00 0.00 2.44
2119 12125 9.428097 GTTCTTTGCTCTAAATTCCATCAAAAT 57.572 29.630 0.00 0.00 0.00 1.82
2121 12127 9.643693 TCTTTGCTCTAAATTCCATCAAAATTC 57.356 29.630 0.00 0.00 0.00 2.17
2122 12128 8.464770 TTTGCTCTAAATTCCATCAAAATTCG 57.535 30.769 0.00 0.00 0.00 3.34
2123 12129 7.156876 TGCTCTAAATTCCATCAAAATTCGT 57.843 32.000 0.00 0.00 0.00 3.85
2124 12130 7.250569 TGCTCTAAATTCCATCAAAATTCGTC 58.749 34.615 0.00 0.00 0.00 4.20
2125 12131 7.094420 TGCTCTAAATTCCATCAAAATTCGTCA 60.094 33.333 0.00 0.00 0.00 4.35
2126 12132 7.917505 GCTCTAAATTCCATCAAAATTCGTCAT 59.082 33.333 0.00 0.00 0.00 3.06
2127 12133 9.229784 CTCTAAATTCCATCAAAATTCGTCATG 57.770 33.333 0.00 0.00 0.00 3.07
2128 12134 8.190122 TCTAAATTCCATCAAAATTCGTCATGG 58.810 33.333 0.00 0.00 36.15 3.66
2129 12135 6.528537 AATTCCATCAAAATTCGTCATGGA 57.471 33.333 0.00 0.00 41.06 3.41
2130 12136 6.720112 ATTCCATCAAAATTCGTCATGGAT 57.280 33.333 8.44 0.00 42.08 3.41
2131 12137 6.528537 TTCCATCAAAATTCGTCATGGATT 57.471 33.333 8.44 0.00 42.08 3.01
2132 12138 6.528537 TCCATCAAAATTCGTCATGGATTT 57.471 33.333 0.00 0.00 38.48 2.17
2133 12139 6.331845 TCCATCAAAATTCGTCATGGATTTG 58.668 36.000 0.00 0.00 38.48 2.32
2134 12140 6.152492 TCCATCAAAATTCGTCATGGATTTGA 59.848 34.615 0.00 0.00 38.48 2.69
2135 12141 6.474427 CCATCAAAATTCGTCATGGATTTGAG 59.526 38.462 0.00 0.00 39.34 3.02
2136 12142 6.573664 TCAAAATTCGTCATGGATTTGAGT 57.426 33.333 0.00 0.00 33.32 3.41
2137 12143 7.680442 TCAAAATTCGTCATGGATTTGAGTA 57.320 32.000 0.00 0.00 33.32 2.59
2138 12144 7.751732 TCAAAATTCGTCATGGATTTGAGTAG 58.248 34.615 0.00 0.00 33.32 2.57
2139 12145 5.741388 AATTCGTCATGGATTTGAGTAGC 57.259 39.130 0.00 0.00 0.00 3.58
2140 12146 4.471904 TTCGTCATGGATTTGAGTAGCT 57.528 40.909 0.00 0.00 0.00 3.32
2141 12147 4.471904 TCGTCATGGATTTGAGTAGCTT 57.528 40.909 0.00 0.00 0.00 3.74
2142 12148 4.433615 TCGTCATGGATTTGAGTAGCTTC 58.566 43.478 0.00 0.00 0.00 3.86
2143 12149 4.160439 TCGTCATGGATTTGAGTAGCTTCT 59.840 41.667 0.00 0.00 0.00 2.85
2144 12150 4.872691 CGTCATGGATTTGAGTAGCTTCTT 59.127 41.667 0.00 0.00 0.00 2.52
2145 12151 5.352569 CGTCATGGATTTGAGTAGCTTCTTT 59.647 40.000 0.00 0.00 0.00 2.52
2146 12152 6.535150 CGTCATGGATTTGAGTAGCTTCTTTA 59.465 38.462 0.00 0.00 0.00 1.85
2147 12153 7.225538 CGTCATGGATTTGAGTAGCTTCTTTAT 59.774 37.037 0.00 0.00 0.00 1.40
2148 12154 8.897752 GTCATGGATTTGAGTAGCTTCTTTATT 58.102 33.333 0.00 0.00 0.00 1.40
2149 12155 8.896744 TCATGGATTTGAGTAGCTTCTTTATTG 58.103 33.333 0.00 0.00 0.00 1.90
2150 12156 7.088589 TGGATTTGAGTAGCTTCTTTATTGC 57.911 36.000 0.00 0.00 0.00 3.56
2151 12157 6.183360 TGGATTTGAGTAGCTTCTTTATTGCG 60.183 38.462 0.00 0.00 0.00 4.85
2152 12158 4.600012 TTGAGTAGCTTCTTTATTGCGC 57.400 40.909 0.00 0.00 0.00 6.09
2153 12159 2.936498 TGAGTAGCTTCTTTATTGCGCC 59.064 45.455 4.18 0.00 0.00 6.53
2154 12160 1.933853 AGTAGCTTCTTTATTGCGCCG 59.066 47.619 4.18 0.00 0.00 6.46
2155 12161 1.003866 GTAGCTTCTTTATTGCGCCGG 60.004 52.381 4.18 0.00 0.00 6.13
2156 12162 0.676782 AGCTTCTTTATTGCGCCGGT 60.677 50.000 4.18 0.00 0.00 5.28
2157 12163 1.011333 GCTTCTTTATTGCGCCGGTA 58.989 50.000 4.18 0.00 0.00 4.02
2158 12164 1.602377 GCTTCTTTATTGCGCCGGTAT 59.398 47.619 4.18 0.00 0.00 2.73
2159 12165 2.349532 GCTTCTTTATTGCGCCGGTATC 60.350 50.000 4.18 0.00 0.00 2.24
2160 12166 2.902705 TCTTTATTGCGCCGGTATCT 57.097 45.000 4.18 0.00 0.00 1.98
2161 12167 3.188159 TCTTTATTGCGCCGGTATCTT 57.812 42.857 4.18 0.00 0.00 2.40
2162 12168 3.128349 TCTTTATTGCGCCGGTATCTTC 58.872 45.455 4.18 0.00 0.00 2.87
2163 12169 2.902705 TTATTGCGCCGGTATCTTCT 57.097 45.000 4.18 0.00 0.00 2.85
2164 12170 2.902705 TATTGCGCCGGTATCTTCTT 57.097 45.000 4.18 0.00 0.00 2.52
2165 12171 1.583054 ATTGCGCCGGTATCTTCTTC 58.417 50.000 4.18 0.00 0.00 2.87
2166 12172 0.535335 TTGCGCCGGTATCTTCTTCT 59.465 50.000 4.18 0.00 0.00 2.85
2167 12173 0.179111 TGCGCCGGTATCTTCTTCTG 60.179 55.000 4.18 0.00 0.00 3.02
2168 12174 1.491505 GCGCCGGTATCTTCTTCTGC 61.492 60.000 1.90 0.00 0.00 4.26
2169 12175 0.179111 CGCCGGTATCTTCTTCTGCA 60.179 55.000 1.90 0.00 0.00 4.41
2170 12176 1.739035 CGCCGGTATCTTCTTCTGCAA 60.739 52.381 1.90 0.00 0.00 4.08
2171 12177 2.356135 GCCGGTATCTTCTTCTGCAAA 58.644 47.619 1.90 0.00 0.00 3.68
2172 12178 2.352960 GCCGGTATCTTCTTCTGCAAAG 59.647 50.000 1.90 0.00 0.00 2.77
2173 12179 3.600388 CCGGTATCTTCTTCTGCAAAGT 58.400 45.455 0.00 0.00 0.00 2.66
2174 12180 4.755411 CCGGTATCTTCTTCTGCAAAGTA 58.245 43.478 0.00 0.27 0.00 2.24
2175 12181 4.567159 CCGGTATCTTCTTCTGCAAAGTAC 59.433 45.833 0.00 0.00 0.00 2.73
2176 12182 5.411781 CGGTATCTTCTTCTGCAAAGTACT 58.588 41.667 0.00 0.00 0.00 2.73
2177 12183 5.517054 CGGTATCTTCTTCTGCAAAGTACTC 59.483 44.000 0.00 0.00 0.00 2.59
2178 12184 5.813157 GGTATCTTCTTCTGCAAAGTACTCC 59.187 44.000 0.00 0.00 0.00 3.85
2179 12185 4.273148 TCTTCTTCTGCAAAGTACTCCC 57.727 45.455 0.00 0.00 0.00 4.30
2180 12186 3.904339 TCTTCTTCTGCAAAGTACTCCCT 59.096 43.478 0.00 0.00 0.00 4.20
2181 12187 3.963428 TCTTCTGCAAAGTACTCCCTC 57.037 47.619 0.00 0.00 0.00 4.30
2182 12188 3.511477 TCTTCTGCAAAGTACTCCCTCT 58.489 45.455 0.00 0.00 0.00 3.69
2183 12189 3.259374 TCTTCTGCAAAGTACTCCCTCTG 59.741 47.826 0.00 0.00 0.00 3.35
2184 12190 2.609747 TCTGCAAAGTACTCCCTCTGT 58.390 47.619 0.00 0.00 0.00 3.41
2185 12191 2.972713 TCTGCAAAGTACTCCCTCTGTT 59.027 45.455 0.00 0.00 0.00 3.16
2186 12192 3.391296 TCTGCAAAGTACTCCCTCTGTTT 59.609 43.478 0.00 0.00 0.00 2.83
2187 12193 4.137543 CTGCAAAGTACTCCCTCTGTTTT 58.862 43.478 0.00 0.00 0.00 2.43
2188 12194 4.532834 TGCAAAGTACTCCCTCTGTTTTT 58.467 39.130 0.00 0.00 0.00 1.94
2189 12195 4.578928 TGCAAAGTACTCCCTCTGTTTTTC 59.421 41.667 0.00 0.00 0.00 2.29
2190 12196 4.822350 GCAAAGTACTCCCTCTGTTTTTCT 59.178 41.667 0.00 0.00 0.00 2.52
2191 12197 5.299531 GCAAAGTACTCCCTCTGTTTTTCTT 59.700 40.000 0.00 0.00 0.00 2.52
2192 12198 6.183360 GCAAAGTACTCCCTCTGTTTTTCTTT 60.183 38.462 0.00 0.00 0.00 2.52
2193 12199 7.630728 GCAAAGTACTCCCTCTGTTTTTCTTTT 60.631 37.037 0.00 0.00 0.00 2.27
2194 12200 8.899771 CAAAGTACTCCCTCTGTTTTTCTTTTA 58.100 33.333 0.00 0.00 0.00 1.52
2195 12201 9.642343 AAAGTACTCCCTCTGTTTTTCTTTTAT 57.358 29.630 0.00 0.00 0.00 1.40
2196 12202 9.642343 AAGTACTCCCTCTGTTTTTCTTTTATT 57.358 29.630 0.00 0.00 0.00 1.40
2197 12203 9.286170 AGTACTCCCTCTGTTTTTCTTTTATTC 57.714 33.333 0.00 0.00 0.00 1.75
2198 12204 9.286170 GTACTCCCTCTGTTTTTCTTTTATTCT 57.714 33.333 0.00 0.00 0.00 2.40
2199 12205 8.171164 ACTCCCTCTGTTTTTCTTTTATTCTG 57.829 34.615 0.00 0.00 0.00 3.02
2200 12206 6.981722 TCCCTCTGTTTTTCTTTTATTCTGC 58.018 36.000 0.00 0.00 0.00 4.26
2201 12207 6.549364 TCCCTCTGTTTTTCTTTTATTCTGCA 59.451 34.615 0.00 0.00 0.00 4.41
2202 12208 7.233348 TCCCTCTGTTTTTCTTTTATTCTGCAT 59.767 33.333 0.00 0.00 0.00 3.96
2203 12209 8.522830 CCCTCTGTTTTTCTTTTATTCTGCATA 58.477 33.333 0.00 0.00 0.00 3.14
2220 12226 7.661536 TCTGCATATTAGTTTAGTCCTGAGT 57.338 36.000 0.00 0.00 0.00 3.41
2221 12227 8.079211 TCTGCATATTAGTTTAGTCCTGAGTT 57.921 34.615 0.00 0.00 0.00 3.01
2222 12228 7.981789 TCTGCATATTAGTTTAGTCCTGAGTTG 59.018 37.037 0.00 0.00 0.00 3.16
2223 12229 7.847096 TGCATATTAGTTTAGTCCTGAGTTGA 58.153 34.615 0.00 0.00 0.00 3.18
2224 12230 8.318412 TGCATATTAGTTTAGTCCTGAGTTGAA 58.682 33.333 0.00 0.00 0.00 2.69
2225 12231 8.604890 GCATATTAGTTTAGTCCTGAGTTGAAC 58.395 37.037 0.00 0.00 0.00 3.18
2226 12232 9.877178 CATATTAGTTTAGTCCTGAGTTGAACT 57.123 33.333 0.00 0.00 0.00 3.01
2349 12355 5.854010 TTTGGCATTGTAGGTGTTAACAA 57.146 34.783 10.51 0.00 39.73 2.83
2423 12465 7.841222 AGCTAAAATGTGGATAAAAAGGGAGAT 59.159 33.333 0.00 0.00 0.00 2.75
2429 12471 9.799106 AATGTGGATAAAAAGGGAGATAGTATG 57.201 33.333 0.00 0.00 0.00 2.39
2430 12472 8.561536 TGTGGATAAAAAGGGAGATAGTATGA 57.438 34.615 0.00 0.00 0.00 2.15
2431 12473 9.170890 TGTGGATAAAAAGGGAGATAGTATGAT 57.829 33.333 0.00 0.00 0.00 2.45
2453 12495 3.978876 AAAAAGGGCGTGGCTAGAT 57.021 47.368 0.00 0.00 0.00 1.98
2454 12496 1.751437 AAAAAGGGCGTGGCTAGATC 58.249 50.000 0.00 0.00 0.00 2.75
2455 12497 0.912486 AAAAGGGCGTGGCTAGATCT 59.088 50.000 0.00 0.00 0.00 2.75
2456 12498 0.466124 AAAGGGCGTGGCTAGATCTC 59.534 55.000 0.00 0.00 0.00 2.75
2457 12499 0.687757 AAGGGCGTGGCTAGATCTCA 60.688 55.000 0.00 0.00 0.00 3.27
2458 12500 1.112315 AGGGCGTGGCTAGATCTCAG 61.112 60.000 0.00 0.00 0.00 3.35
2459 12501 1.395826 GGGCGTGGCTAGATCTCAGT 61.396 60.000 0.00 0.00 0.00 3.41
2460 12502 0.031449 GGCGTGGCTAGATCTCAGTC 59.969 60.000 0.00 0.00 0.00 3.51
2461 12503 0.317436 GCGTGGCTAGATCTCAGTCG 60.317 60.000 0.00 0.71 0.00 4.18
2462 12504 1.300481 CGTGGCTAGATCTCAGTCGA 58.700 55.000 0.00 0.00 0.00 4.20
2463 12505 1.003331 CGTGGCTAGATCTCAGTCGAC 60.003 57.143 7.70 7.70 0.00 4.20
2464 12506 2.294074 GTGGCTAGATCTCAGTCGACT 58.706 52.381 13.58 13.58 0.00 4.18
2465 12507 2.032799 GTGGCTAGATCTCAGTCGACTG 59.967 54.545 34.76 34.76 45.08 3.51
2480 12522 4.618965 GTCGACTGAGACTTAACCAAGTT 58.381 43.478 8.70 0.00 45.18 2.66
2481 12523 5.048507 GTCGACTGAGACTTAACCAAGTTT 58.951 41.667 8.70 0.00 45.18 2.66
2482 12524 5.175308 GTCGACTGAGACTTAACCAAGTTTC 59.825 44.000 8.70 2.11 45.18 2.78
2487 12529 5.984725 TGAGACTTAACCAAGTTTCAGTCA 58.015 37.500 16.02 0.00 45.80 3.41
2488 12530 6.411376 TGAGACTTAACCAAGTTTCAGTCAA 58.589 36.000 16.02 6.57 45.80 3.18
2489 12531 6.538742 TGAGACTTAACCAAGTTTCAGTCAAG 59.461 38.462 16.02 4.13 45.80 3.02
2490 12532 6.415573 AGACTTAACCAAGTTTCAGTCAAGT 58.584 36.000 16.02 6.54 45.18 3.16
2491 12533 6.316390 AGACTTAACCAAGTTTCAGTCAAGTG 59.684 38.462 16.02 0.00 45.18 3.16
2492 12534 6.177610 ACTTAACCAAGTTTCAGTCAAGTGA 58.822 36.000 0.00 0.00 42.51 3.41
2493 12535 4.965119 AACCAAGTTTCAGTCAAGTGAC 57.035 40.909 3.12 3.12 45.08 3.67
2494 12536 8.226414 ACTTAACCAAGTTTCAGTCAAGTGACA 61.226 37.037 13.66 0.00 43.63 3.58
2498 12540 5.447818 CCAAGTTTCAGTCAAGTGACAGAAC 60.448 44.000 16.16 14.22 45.79 3.01
2499 12541 4.832248 AGTTTCAGTCAAGTGACAGAACA 58.168 39.130 16.16 7.64 45.79 3.18
2500 12542 5.431765 AGTTTCAGTCAAGTGACAGAACAT 58.568 37.500 16.16 7.52 45.79 2.71
2501 12543 6.582636 AGTTTCAGTCAAGTGACAGAACATA 58.417 36.000 16.16 2.98 45.79 2.29
2502 12544 7.220030 AGTTTCAGTCAAGTGACAGAACATAT 58.780 34.615 16.16 3.60 45.79 1.78
2503 12545 8.367911 AGTTTCAGTCAAGTGACAGAACATATA 58.632 33.333 16.16 2.38 45.79 0.86
2504 12546 8.988934 GTTTCAGTCAAGTGACAGAACATATAA 58.011 33.333 16.16 1.78 45.79 0.98
2505 12547 9.554395 TTTCAGTCAAGTGACAGAACATATAAA 57.446 29.630 16.16 1.19 45.79 1.40
2509 12551 8.534333 GTCAAGTGACAGAACATATAAACAGA 57.466 34.615 6.57 0.00 44.18 3.41
2510 12552 8.988934 GTCAAGTGACAGAACATATAAACAGAA 58.011 33.333 6.57 0.00 44.18 3.02
2511 12553 9.554395 TCAAGTGACAGAACATATAAACAGAAA 57.446 29.630 0.00 0.00 0.00 2.52
2528 12570 8.726650 AAACAGAAAAAGACAAAATTTTGCAC 57.273 26.923 26.94 20.90 41.79 4.57
2529 12571 7.432350 ACAGAAAAAGACAAAATTTTGCACA 57.568 28.000 26.94 0.00 41.79 4.57
2530 12572 7.520686 ACAGAAAAAGACAAAATTTTGCACAG 58.479 30.769 26.94 7.18 41.79 3.66
2531 12573 7.387397 ACAGAAAAAGACAAAATTTTGCACAGA 59.613 29.630 26.94 0.00 41.79 3.41
2532 12574 8.392612 CAGAAAAAGACAAAATTTTGCACAGAT 58.607 29.630 26.94 12.34 41.79 2.90
2533 12575 8.606602 AGAAAAAGACAAAATTTTGCACAGATC 58.393 29.630 26.94 18.73 41.79 2.75
2534 12576 8.496707 AAAAAGACAAAATTTTGCACAGATCT 57.503 26.923 26.94 18.64 41.79 2.75
2535 12577 7.704789 AAAGACAAAATTTTGCACAGATCTC 57.295 32.000 26.94 15.72 41.79 2.75
2536 12578 5.776744 AGACAAAATTTTGCACAGATCTCC 58.223 37.500 26.94 6.96 41.79 3.71
2537 12579 5.302568 AGACAAAATTTTGCACAGATCTCCA 59.697 36.000 26.94 0.00 41.79 3.86
2538 12580 6.014840 AGACAAAATTTTGCACAGATCTCCAT 60.015 34.615 26.94 6.23 41.79 3.41
2539 12581 7.177216 AGACAAAATTTTGCACAGATCTCCATA 59.823 33.333 26.94 0.00 41.79 2.74
2540 12582 7.844009 ACAAAATTTTGCACAGATCTCCATAT 58.156 30.769 26.94 2.76 41.79 1.78
2541 12583 8.970020 ACAAAATTTTGCACAGATCTCCATATA 58.030 29.630 26.94 0.00 41.79 0.86
2542 12584 9.806203 CAAAATTTTGCACAGATCTCCATATAA 57.194 29.630 17.48 0.00 0.00 0.98
2544 12586 8.985315 AATTTTGCACAGATCTCCATATAAGA 57.015 30.769 0.00 0.00 0.00 2.10
2545 12587 9.584008 AATTTTGCACAGATCTCCATATAAGAT 57.416 29.630 0.00 0.53 36.19 2.40
2548 12590 9.881649 TTTGCACAGATCTCCATATAAGATATC 57.118 33.333 0.00 0.00 33.64 1.63
2549 12591 8.599624 TGCACAGATCTCCATATAAGATATCA 57.400 34.615 5.32 0.00 33.64 2.15
2550 12592 9.210228 TGCACAGATCTCCATATAAGATATCAT 57.790 33.333 5.32 0.00 33.64 2.45
2551 12593 9.478768 GCACAGATCTCCATATAAGATATCATG 57.521 37.037 5.32 0.00 33.64 3.07
2567 12609 7.366513 AGATATCATGAATATAGCATCGACCG 58.633 38.462 5.32 0.00 30.37 4.79
2568 12610 5.582689 ATCATGAATATAGCATCGACCGA 57.417 39.130 0.00 0.00 0.00 4.69
2569 12611 4.986622 TCATGAATATAGCATCGACCGAG 58.013 43.478 0.00 0.00 0.00 4.63
2570 12612 4.700213 TCATGAATATAGCATCGACCGAGA 59.300 41.667 0.00 0.00 0.00 4.04
2571 12613 4.421033 TGAATATAGCATCGACCGAGAC 57.579 45.455 0.00 0.00 0.00 3.36
2572 12614 4.072839 TGAATATAGCATCGACCGAGACT 58.927 43.478 0.00 0.76 0.00 3.24
2573 12615 4.519350 TGAATATAGCATCGACCGAGACTT 59.481 41.667 0.00 0.00 0.00 3.01
2574 12616 5.009710 TGAATATAGCATCGACCGAGACTTT 59.990 40.000 0.00 0.00 0.00 2.66
2575 12617 2.561733 TAGCATCGACCGAGACTTTG 57.438 50.000 0.00 0.00 0.00 2.77
2576 12618 0.603569 AGCATCGACCGAGACTTTGT 59.396 50.000 0.00 0.00 0.00 2.83
2577 12619 1.000955 AGCATCGACCGAGACTTTGTT 59.999 47.619 0.00 0.00 0.00 2.83
2578 12620 2.230508 AGCATCGACCGAGACTTTGTTA 59.769 45.455 0.00 0.00 0.00 2.41
2579 12621 2.991190 GCATCGACCGAGACTTTGTTAA 59.009 45.455 0.00 0.00 0.00 2.01
2580 12622 3.060895 GCATCGACCGAGACTTTGTTAAG 59.939 47.826 0.00 0.00 37.40 1.85
2592 12634 5.517322 ACTTTGTTAAGTCTCAGTCGACT 57.483 39.130 13.58 13.58 45.73 4.18
2593 12635 5.282510 ACTTTGTTAAGTCTCAGTCGACTG 58.717 41.667 34.76 34.76 43.14 3.51
2594 12636 5.067413 ACTTTGTTAAGTCTCAGTCGACTGA 59.933 40.000 38.24 38.24 44.30 3.41
2608 12650 6.210078 CAGTCGACTGAGATTTAGTAATCCC 58.790 44.000 36.73 0.00 46.59 3.85
2609 12651 5.008811 AGTCGACTGAGATTTAGTAATCCCG 59.991 44.000 19.30 0.00 40.91 5.14
2643 12685 2.676748 TGGAAAGACACCTTTGGCAAT 58.323 42.857 0.00 0.00 42.30 3.56
2657 12699 1.281867 TGGCAATGGTAGAACCTCCAG 59.718 52.381 0.00 0.00 39.58 3.86
2662 12704 2.661176 TGGTAGAACCTCCAGGGAAT 57.339 50.000 0.00 0.00 39.58 3.01
2673 12715 1.368203 TCCAGGGAATAGGAGGGTTCA 59.632 52.381 0.00 0.00 0.00 3.18
2674 12716 2.205342 CCAGGGAATAGGAGGGTTCAA 58.795 52.381 0.00 0.00 0.00 2.69
2690 12733 7.766738 GGAGGGTTCAACAAAATTAAAGTGAAA 59.233 33.333 0.00 0.00 0.00 2.69
2701 12744 9.500864 CAAAATTAAAGTGAAACAAATTGGTGG 57.499 29.630 0.00 0.00 41.43 4.61
2702 12745 9.454859 AAAATTAAAGTGAAACAAATTGGTGGA 57.545 25.926 0.00 0.00 41.43 4.02
2703 12746 9.454859 AAATTAAAGTGAAACAAATTGGTGGAA 57.545 25.926 0.00 0.00 41.43 3.53
2704 12747 7.835634 TTAAAGTGAAACAAATTGGTGGAAC 57.164 32.000 0.00 0.00 41.43 3.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.562757 CCCGAAACTTAGAACTCATGTCCA 60.563 45.833 0.00 0.00 0.00 4.02
1 2 3.933332 CCCGAAACTTAGAACTCATGTCC 59.067 47.826 0.00 0.00 0.00 4.02
3 4 4.618920 ACCCGAAACTTAGAACTCATGT 57.381 40.909 0.00 0.00 0.00 3.21
4 5 5.941948 AAACCCGAAACTTAGAACTCATG 57.058 39.130 0.00 0.00 0.00 3.07
9 10 6.790285 TGATGTAAACCCGAAACTTAGAAC 57.210 37.500 0.00 0.00 0.00 3.01
27 28 4.447138 TTGGGAACTAGTTGGTTGATGT 57.553 40.909 14.14 0.00 0.00 3.06
30 31 4.237976 TGTTTGGGAACTAGTTGGTTGA 57.762 40.909 14.14 0.00 36.70 3.18
60 61 7.651229 ACCTACCTCCTCTGATAAGTAGTAT 57.349 40.000 0.00 0.00 0.00 2.12
138 139 9.373603 CTGGATCTCTAATTCATTCATCAGATC 57.626 37.037 0.00 0.00 36.03 2.75
143 144 6.162079 TCGCTGGATCTCTAATTCATTCATC 58.838 40.000 0.00 0.00 0.00 2.92
149 150 5.598416 TTCTTCGCTGGATCTCTAATTCA 57.402 39.130 0.00 0.00 0.00 2.57
232 237 5.461526 TCAGCCTCTGTATATCGAAATTCG 58.538 41.667 9.38 9.38 35.51 3.34
242 247 1.889170 CATCGCCTCAGCCTCTGTATA 59.111 52.381 0.00 0.00 34.57 1.47
248 253 2.279120 CGACATCGCCTCAGCCTC 60.279 66.667 0.00 0.00 34.57 4.70
262 267 6.196538 CACCTTTTACTTTTTGAGCTTTCGAC 59.803 38.462 0.00 0.00 0.00 4.20
355 6964 1.515954 CGTGTATGCCTCGGTCCTT 59.484 57.895 0.00 0.00 0.00 3.36
476 7091 1.348064 TGGACCTCTCCGTTCATTGT 58.652 50.000 0.00 0.00 39.88 2.71
713 7341 2.288213 TGAACTCGACACTGTTAGCTGG 60.288 50.000 0.00 0.00 0.00 4.85
720 7348 1.200252 CTCGGATGAACTCGACACTGT 59.800 52.381 0.00 0.00 0.00 3.55
768 7399 1.662044 CACTGCCACTGCTTTTCCC 59.338 57.895 0.00 0.00 38.71 3.97
978 10937 0.250467 GTGGGTGGATGATGATCGGG 60.250 60.000 0.00 0.00 0.00 5.14
1024 10987 4.554363 CGCGGGCGAGAACGAGAT 62.554 66.667 7.38 0.00 42.83 2.75
1170 11142 1.080705 GAAGTAGCTCACGCACGGT 60.081 57.895 0.00 0.00 39.10 4.83
1359 11331 6.210584 ATGTATATCATGTCATGGACGTACCA 59.789 38.462 12.90 8.81 43.28 3.25
1379 11351 7.497249 GCTCCATCTCAGTTTTTCTACATGTAT 59.503 37.037 5.91 0.00 0.00 2.29
1397 11379 3.368531 GGTTAGTCACTTTCGCTCCATCT 60.369 47.826 0.00 0.00 0.00 2.90
1398 11380 2.930682 GGTTAGTCACTTTCGCTCCATC 59.069 50.000 0.00 0.00 0.00 3.51
1430 11412 2.277247 GCACACACACGCACACAC 60.277 61.111 0.00 0.00 0.00 3.82
1451 11433 3.760035 CCCGAGGTCCCTGTCACG 61.760 72.222 0.00 0.00 0.00 4.35
1514 11496 2.532256 CGCAGCAGCATCAGTAGGC 61.532 63.158 0.82 0.00 42.27 3.93
1657 11648 4.181010 CCATGGCCAGGAGGACCG 62.181 72.222 21.32 0.00 45.14 4.79
1658 11649 4.512914 GCCATGGCCAGGAGGACC 62.513 72.222 27.24 1.29 45.14 4.46
1660 11651 3.414193 CAGCCATGGCCAGGAGGA 61.414 66.667 33.14 0.00 43.17 3.71
1721 11715 1.106944 AACTCACAAACAAGCCCCGG 61.107 55.000 0.00 0.00 0.00 5.73
1723 11717 1.480545 ACAAACTCACAAACAAGCCCC 59.519 47.619 0.00 0.00 0.00 5.80
1726 11720 4.096732 AGTCACAAACTCACAAACAAGC 57.903 40.909 0.00 0.00 30.02 4.01
1780 11778 6.804677 ATCAATGACAGACTCACTGATACTC 58.195 40.000 0.00 0.00 42.74 2.59
1781 11779 6.788598 ATCAATGACAGACTCACTGATACT 57.211 37.500 0.00 0.00 42.74 2.12
1782 11780 7.675870 GCAAATCAATGACAGACTCACTGATAC 60.676 40.741 0.00 0.00 43.56 2.24
1783 11781 6.314648 GCAAATCAATGACAGACTCACTGATA 59.685 38.462 0.00 0.00 43.56 2.15
1784 11782 5.123502 GCAAATCAATGACAGACTCACTGAT 59.876 40.000 0.00 0.00 45.75 2.90
1787 11785 4.649692 AGCAAATCAATGACAGACTCACT 58.350 39.130 0.00 0.00 0.00 3.41
1788 11786 4.142730 GGAGCAAATCAATGACAGACTCAC 60.143 45.833 7.25 0.00 0.00 3.51
1824 11822 8.272545 TGATCCATTAAAGAGAAGTCACAATG 57.727 34.615 0.00 0.00 0.00 2.82
1826 11824 8.868522 AATGATCCATTAAAGAGAAGTCACAA 57.131 30.769 0.00 0.00 31.77 3.33
1835 11833 5.952387 TGGGGGTAATGATCCATTAAAGAG 58.048 41.667 1.45 0.00 37.94 2.85
1837 11835 7.289782 TGAATTGGGGGTAATGATCCATTAAAG 59.710 37.037 1.45 0.00 37.94 1.85
1842 11840 4.078688 TGTGAATTGGGGGTAATGATCCAT 60.079 41.667 0.00 0.00 0.00 3.41
1846 11844 5.103558 TCTGATGTGAATTGGGGGTAATGAT 60.104 40.000 0.00 0.00 0.00 2.45
1848 11846 4.339247 GTCTGATGTGAATTGGGGGTAATG 59.661 45.833 0.00 0.00 0.00 1.90
1853 11857 2.756760 CAAGTCTGATGTGAATTGGGGG 59.243 50.000 0.00 0.00 38.07 5.40
1861 11865 3.134623 ACCAAGTGACAAGTCTGATGTGA 59.865 43.478 1.53 0.00 0.00 3.58
1871 11875 0.813610 TCGCACCACCAAGTGACAAG 60.814 55.000 0.00 0.00 40.34 3.16
1891 11895 5.739752 TGCAAAAGCTAGCACTACATATG 57.260 39.130 18.83 0.00 35.51 1.78
1896 11902 2.478894 TCGTTGCAAAAGCTAGCACTAC 59.521 45.455 18.83 6.83 41.05 2.73
1912 11918 5.643777 ACCAAGTGAGATTAATTCCTCGTTG 59.356 40.000 9.76 9.76 32.30 4.10
1927 11933 1.202806 TGGAGGAAAGCACCAAGTGAG 60.203 52.381 0.00 0.00 35.23 3.51
1928 11934 0.843309 TGGAGGAAAGCACCAAGTGA 59.157 50.000 0.00 0.00 35.23 3.41
1938 11944 1.419374 CGTGAGACGTTGGAGGAAAG 58.581 55.000 0.00 0.00 36.74 2.62
1939 11945 0.032952 CCGTGAGACGTTGGAGGAAA 59.967 55.000 0.00 0.00 40.58 3.13
1966 11972 0.625849 AACGATTCAGGAGCCCCATT 59.374 50.000 0.00 0.00 33.88 3.16
1971 11977 1.667724 CATGACAACGATTCAGGAGCC 59.332 52.381 0.00 0.00 0.00 4.70
1972 11978 2.094894 CACATGACAACGATTCAGGAGC 59.905 50.000 0.00 0.00 0.00 4.70
1973 11979 2.094894 GCACATGACAACGATTCAGGAG 59.905 50.000 0.00 0.00 0.00 3.69
1974 11980 2.076100 GCACATGACAACGATTCAGGA 58.924 47.619 0.00 0.00 0.00 3.86
1975 11981 1.131126 GGCACATGACAACGATTCAGG 59.869 52.381 0.00 0.00 0.00 3.86
1976 11982 1.131126 GGGCACATGACAACGATTCAG 59.869 52.381 0.00 0.00 0.00 3.02
1977 11983 1.164411 GGGCACATGACAACGATTCA 58.836 50.000 0.00 0.00 0.00 2.57
1978 11984 1.453155 AGGGCACATGACAACGATTC 58.547 50.000 0.00 0.00 0.00 2.52
1979 11985 2.747446 GTTAGGGCACATGACAACGATT 59.253 45.455 0.00 0.00 0.00 3.34
1980 11986 2.290008 TGTTAGGGCACATGACAACGAT 60.290 45.455 0.00 0.00 0.00 3.73
1981 11987 1.070914 TGTTAGGGCACATGACAACGA 59.929 47.619 0.00 0.00 0.00 3.85
1982 11988 1.464608 CTGTTAGGGCACATGACAACG 59.535 52.381 0.00 0.00 0.00 4.10
1983 11989 2.226437 CACTGTTAGGGCACATGACAAC 59.774 50.000 0.00 0.00 0.00 3.32
1984 11990 2.158682 ACACTGTTAGGGCACATGACAA 60.159 45.455 0.00 0.00 0.00 3.18
1985 11991 1.419762 ACACTGTTAGGGCACATGACA 59.580 47.619 0.00 0.00 0.00 3.58
1986 11992 2.185004 ACACTGTTAGGGCACATGAC 57.815 50.000 0.00 0.00 0.00 3.06
1987 11993 3.370421 CCATACACTGTTAGGGCACATGA 60.370 47.826 0.00 0.00 0.00 3.07
1988 11994 2.945008 CCATACACTGTTAGGGCACATG 59.055 50.000 0.00 0.00 0.00 3.21
1989 11995 2.092429 CCCATACACTGTTAGGGCACAT 60.092 50.000 5.86 0.00 31.81 3.21
1990 11996 1.280710 CCCATACACTGTTAGGGCACA 59.719 52.381 5.86 0.00 31.81 4.57
1991 11997 1.280998 ACCCATACACTGTTAGGGCAC 59.719 52.381 15.28 0.00 43.47 5.01
1992 11998 1.663911 ACCCATACACTGTTAGGGCA 58.336 50.000 15.28 0.00 43.47 5.36
1993 11999 2.026636 TGAACCCATACACTGTTAGGGC 60.027 50.000 15.28 4.69 43.47 5.19
1994 12000 3.992943 TGAACCCATACACTGTTAGGG 57.007 47.619 14.23 14.23 45.20 3.53
1995 12001 5.097742 TGATGAACCCATACACTGTTAGG 57.902 43.478 0.00 0.00 32.09 2.69
1996 12002 5.812642 GTCTGATGAACCCATACACTGTTAG 59.187 44.000 0.00 0.00 32.09 2.34
1997 12003 5.247337 TGTCTGATGAACCCATACACTGTTA 59.753 40.000 0.00 0.00 32.09 2.41
1998 12004 4.041567 TGTCTGATGAACCCATACACTGTT 59.958 41.667 0.00 0.00 32.09 3.16
1999 12005 3.582647 TGTCTGATGAACCCATACACTGT 59.417 43.478 0.00 0.00 32.09 3.55
2000 12006 4.206477 TGTCTGATGAACCCATACACTG 57.794 45.455 0.00 0.00 32.09 3.66
2001 12007 4.908601 TTGTCTGATGAACCCATACACT 57.091 40.909 0.00 0.00 32.09 3.55
2002 12008 4.142600 GCTTTGTCTGATGAACCCATACAC 60.143 45.833 0.00 0.00 32.09 2.90
2003 12009 4.009675 GCTTTGTCTGATGAACCCATACA 58.990 43.478 0.00 0.00 32.09 2.29
2004 12010 4.009675 TGCTTTGTCTGATGAACCCATAC 58.990 43.478 0.00 0.00 32.09 2.39
2005 12011 4.299586 TGCTTTGTCTGATGAACCCATA 57.700 40.909 0.00 0.00 32.09 2.74
2006 12012 3.159213 TGCTTTGTCTGATGAACCCAT 57.841 42.857 0.00 0.00 35.29 4.00
2007 12013 2.655090 TGCTTTGTCTGATGAACCCA 57.345 45.000 0.00 0.00 0.00 4.51
2008 12014 4.488879 GATTTGCTTTGTCTGATGAACCC 58.511 43.478 0.00 0.00 0.00 4.11
2009 12015 4.161333 CGATTTGCTTTGTCTGATGAACC 58.839 43.478 0.00 0.00 0.00 3.62
2010 12016 4.161333 CCGATTTGCTTTGTCTGATGAAC 58.839 43.478 0.00 0.00 0.00 3.18
2011 12017 3.366273 GCCGATTTGCTTTGTCTGATGAA 60.366 43.478 0.00 0.00 0.00 2.57
2012 12018 2.162208 GCCGATTTGCTTTGTCTGATGA 59.838 45.455 0.00 0.00 0.00 2.92
2013 12019 2.523015 GCCGATTTGCTTTGTCTGATG 58.477 47.619 0.00 0.00 0.00 3.07
2014 12020 1.474077 GGCCGATTTGCTTTGTCTGAT 59.526 47.619 0.00 0.00 0.00 2.90
2015 12021 0.881118 GGCCGATTTGCTTTGTCTGA 59.119 50.000 0.00 0.00 0.00 3.27
2016 12022 0.109132 GGGCCGATTTGCTTTGTCTG 60.109 55.000 0.00 0.00 0.00 3.51
2017 12023 1.586154 CGGGCCGATTTGCTTTGTCT 61.586 55.000 24.41 0.00 0.00 3.41
2018 12024 1.154035 CGGGCCGATTTGCTTTGTC 60.154 57.895 24.41 0.00 0.00 3.18
2019 12025 1.602323 TCGGGCCGATTTGCTTTGT 60.602 52.632 27.46 0.00 0.00 2.83
2020 12026 1.154035 GTCGGGCCGATTTGCTTTG 60.154 57.895 33.54 0.00 38.42 2.77
2021 12027 1.175983 TTGTCGGGCCGATTTGCTTT 61.176 50.000 33.54 0.00 38.42 3.51
2022 12028 1.586154 CTTGTCGGGCCGATTTGCTT 61.586 55.000 33.54 0.00 38.42 3.91
2023 12029 2.033448 TTGTCGGGCCGATTTGCT 59.967 55.556 33.54 0.00 38.42 3.91
2024 12030 2.485122 CTTGTCGGGCCGATTTGC 59.515 61.111 33.54 19.56 38.42 3.68
2025 12031 2.485122 GCTTGTCGGGCCGATTTG 59.515 61.111 33.54 23.53 38.42 2.32
2026 12032 2.750237 GGCTTGTCGGGCCGATTT 60.750 61.111 33.54 0.00 40.19 2.17
2032 12038 1.299850 GTTTTGTGGCTTGTCGGGC 60.300 57.895 0.00 0.00 0.00 6.13
2033 12039 0.030638 CTGTTTTGTGGCTTGTCGGG 59.969 55.000 0.00 0.00 0.00 5.14
2034 12040 0.594796 GCTGTTTTGTGGCTTGTCGG 60.595 55.000 0.00 0.00 0.00 4.79
2035 12041 0.100325 TGCTGTTTTGTGGCTTGTCG 59.900 50.000 0.00 0.00 0.00 4.35
2036 12042 2.514205 ATGCTGTTTTGTGGCTTGTC 57.486 45.000 0.00 0.00 0.00 3.18
2037 12043 2.553086 CAATGCTGTTTTGTGGCTTGT 58.447 42.857 0.00 0.00 0.00 3.16
2038 12044 1.262151 GCAATGCTGTTTTGTGGCTTG 59.738 47.619 0.00 0.00 0.00 4.01
2039 12045 1.585297 GCAATGCTGTTTTGTGGCTT 58.415 45.000 0.00 0.00 0.00 4.35
2040 12046 0.598158 CGCAATGCTGTTTTGTGGCT 60.598 50.000 2.94 0.00 32.32 4.75
2041 12047 0.875474 ACGCAATGCTGTTTTGTGGC 60.875 50.000 2.94 0.00 38.57 5.01
2042 12048 0.854062 CACGCAATGCTGTTTTGTGG 59.146 50.000 2.94 0.00 38.57 4.17
2043 12049 1.837648 TCACGCAATGCTGTTTTGTG 58.162 45.000 2.94 2.94 39.78 3.33
2044 12050 2.396601 CATCACGCAATGCTGTTTTGT 58.603 42.857 2.94 0.00 0.00 2.83
2045 12051 1.125384 GCATCACGCAATGCTGTTTTG 59.875 47.619 13.69 4.62 46.81 2.44
2046 12052 1.421382 GCATCACGCAATGCTGTTTT 58.579 45.000 13.69 0.00 46.81 2.43
2047 12053 3.111536 GCATCACGCAATGCTGTTT 57.888 47.368 13.69 0.00 46.81 2.83
2048 12054 4.874534 GCATCACGCAATGCTGTT 57.125 50.000 13.69 0.00 46.81 3.16
2057 12063 0.247814 CGAATTCAGGTGCATCACGC 60.248 55.000 6.22 0.00 42.89 5.34
2058 12064 1.078709 ACGAATTCAGGTGCATCACG 58.921 50.000 6.22 0.00 34.83 4.35
2059 12065 2.076100 TCACGAATTCAGGTGCATCAC 58.924 47.619 6.22 0.00 34.20 3.06
2060 12066 2.470983 TCACGAATTCAGGTGCATCA 57.529 45.000 6.22 0.00 34.20 3.07
2061 12067 4.210120 GTCTATCACGAATTCAGGTGCATC 59.790 45.833 6.22 0.00 34.20 3.91
2062 12068 4.122776 GTCTATCACGAATTCAGGTGCAT 58.877 43.478 6.22 5.35 34.20 3.96
2063 12069 3.195610 AGTCTATCACGAATTCAGGTGCA 59.804 43.478 6.22 0.00 34.20 4.57
2064 12070 3.786635 AGTCTATCACGAATTCAGGTGC 58.213 45.455 6.22 0.00 34.20 5.01
2065 12071 5.410924 TCAAGTCTATCACGAATTCAGGTG 58.589 41.667 6.22 6.70 35.50 4.00
2066 12072 5.661056 TCAAGTCTATCACGAATTCAGGT 57.339 39.130 6.22 0.00 0.00 4.00
2067 12073 5.869344 TGTTCAAGTCTATCACGAATTCAGG 59.131 40.000 6.22 0.00 0.00 3.86
2068 12074 6.951256 TGTTCAAGTCTATCACGAATTCAG 57.049 37.500 6.22 1.11 0.00 3.02
2069 12075 6.873605 ACATGTTCAAGTCTATCACGAATTCA 59.126 34.615 6.22 0.00 0.00 2.57
2070 12076 7.295952 ACATGTTCAAGTCTATCACGAATTC 57.704 36.000 0.00 0.00 0.00 2.17
2071 12077 7.604164 AGAACATGTTCAAGTCTATCACGAATT 59.396 33.333 33.92 9.74 41.84 2.17
2072 12078 7.099764 AGAACATGTTCAAGTCTATCACGAAT 58.900 34.615 33.92 10.09 41.84 3.34
2073 12079 6.455647 AGAACATGTTCAAGTCTATCACGAA 58.544 36.000 33.92 0.00 41.84 3.85
2074 12080 6.025749 AGAACATGTTCAAGTCTATCACGA 57.974 37.500 33.92 0.00 41.84 4.35
2075 12081 6.712241 AAGAACATGTTCAAGTCTATCACG 57.288 37.500 33.92 0.00 41.84 4.35
2076 12082 6.798959 GCAAAGAACATGTTCAAGTCTATCAC 59.201 38.462 33.92 9.03 41.84 3.06
2077 12083 6.712095 AGCAAAGAACATGTTCAAGTCTATCA 59.288 34.615 33.92 0.00 41.84 2.15
2078 12084 7.118971 AGAGCAAAGAACATGTTCAAGTCTATC 59.881 37.037 33.92 22.55 41.84 2.08
2079 12085 6.939163 AGAGCAAAGAACATGTTCAAGTCTAT 59.061 34.615 33.92 21.00 41.84 1.98
2080 12086 6.291377 AGAGCAAAGAACATGTTCAAGTCTA 58.709 36.000 33.92 0.00 41.84 2.59
2081 12087 5.128919 AGAGCAAAGAACATGTTCAAGTCT 58.871 37.500 33.92 24.92 41.84 3.24
2082 12088 5.429957 AGAGCAAAGAACATGTTCAAGTC 57.570 39.130 33.92 22.86 41.84 3.01
2083 12089 6.942532 TTAGAGCAAAGAACATGTTCAAGT 57.057 33.333 33.92 19.27 41.84 3.16
2084 12090 8.807667 AATTTAGAGCAAAGAACATGTTCAAG 57.192 30.769 33.92 24.37 41.84 3.02
2085 12091 7.867403 GGAATTTAGAGCAAAGAACATGTTCAA 59.133 33.333 33.92 19.33 41.84 2.69
2086 12092 7.014134 TGGAATTTAGAGCAAAGAACATGTTCA 59.986 33.333 33.92 14.36 41.84 3.18
2087 12093 7.370383 TGGAATTTAGAGCAAAGAACATGTTC 58.630 34.615 27.69 27.69 39.78 3.18
2088 12094 7.288810 TGGAATTTAGAGCAAAGAACATGTT 57.711 32.000 11.78 11.78 0.00 2.71
2089 12095 6.899393 TGGAATTTAGAGCAAAGAACATGT 57.101 33.333 0.00 0.00 0.00 3.21
2090 12096 7.541162 TGATGGAATTTAGAGCAAAGAACATG 58.459 34.615 0.00 0.00 0.00 3.21
2091 12097 7.707624 TGATGGAATTTAGAGCAAAGAACAT 57.292 32.000 0.00 0.00 0.00 2.71
2092 12098 7.523293 TTGATGGAATTTAGAGCAAAGAACA 57.477 32.000 0.00 0.00 0.00 3.18
2093 12099 8.816640 TTTTGATGGAATTTAGAGCAAAGAAC 57.183 30.769 0.00 0.00 0.00 3.01
2095 12101 9.643693 GAATTTTGATGGAATTTAGAGCAAAGA 57.356 29.630 0.00 0.00 0.00 2.52
2096 12102 8.589629 CGAATTTTGATGGAATTTAGAGCAAAG 58.410 33.333 0.00 0.00 0.00 2.77
2097 12103 8.087750 ACGAATTTTGATGGAATTTAGAGCAAA 58.912 29.630 0.00 0.00 0.00 3.68
2098 12104 7.601856 ACGAATTTTGATGGAATTTAGAGCAA 58.398 30.769 0.00 0.00 0.00 3.91
2099 12105 7.094420 TGACGAATTTTGATGGAATTTAGAGCA 60.094 33.333 0.00 0.00 0.00 4.26
2100 12106 7.250569 TGACGAATTTTGATGGAATTTAGAGC 58.749 34.615 0.00 0.00 0.00 4.09
2101 12107 9.229784 CATGACGAATTTTGATGGAATTTAGAG 57.770 33.333 0.00 0.00 0.00 2.43
2102 12108 8.190122 CCATGACGAATTTTGATGGAATTTAGA 58.810 33.333 0.00 0.00 36.45 2.10
2103 12109 8.190122 TCCATGACGAATTTTGATGGAATTTAG 58.810 33.333 6.69 0.00 39.69 1.85
2104 12110 8.060931 TCCATGACGAATTTTGATGGAATTTA 57.939 30.769 6.69 0.00 39.69 1.40
2105 12111 6.934056 TCCATGACGAATTTTGATGGAATTT 58.066 32.000 6.69 0.00 39.69 1.82
2106 12112 6.528537 TCCATGACGAATTTTGATGGAATT 57.471 33.333 6.69 0.00 39.69 2.17
2107 12113 6.720112 ATCCATGACGAATTTTGATGGAAT 57.280 33.333 11.50 1.73 44.41 3.01
2108 12114 6.528537 AATCCATGACGAATTTTGATGGAA 57.471 33.333 11.50 0.00 44.41 3.53
2109 12115 6.152492 TCAAATCCATGACGAATTTTGATGGA 59.848 34.615 10.33 10.33 45.11 3.41
2110 12116 6.331845 TCAAATCCATGACGAATTTTGATGG 58.668 36.000 0.00 0.00 35.79 3.51
2111 12117 7.031372 ACTCAAATCCATGACGAATTTTGATG 58.969 34.615 0.00 0.00 33.91 3.07
2112 12118 7.161773 ACTCAAATCCATGACGAATTTTGAT 57.838 32.000 0.00 0.00 33.91 2.57
2113 12119 6.573664 ACTCAAATCCATGACGAATTTTGA 57.426 33.333 0.00 0.00 33.47 2.69
2114 12120 6.470235 GCTACTCAAATCCATGACGAATTTTG 59.530 38.462 0.00 0.00 0.00 2.44
2115 12121 6.375455 AGCTACTCAAATCCATGACGAATTTT 59.625 34.615 0.00 0.00 0.00 1.82
2116 12122 5.882557 AGCTACTCAAATCCATGACGAATTT 59.117 36.000 0.00 0.00 0.00 1.82
2117 12123 5.431765 AGCTACTCAAATCCATGACGAATT 58.568 37.500 0.00 0.00 0.00 2.17
2118 12124 5.028549 AGCTACTCAAATCCATGACGAAT 57.971 39.130 0.00 0.00 0.00 3.34
2119 12125 4.471904 AGCTACTCAAATCCATGACGAA 57.528 40.909 0.00 0.00 0.00 3.85
2120 12126 4.160439 AGAAGCTACTCAAATCCATGACGA 59.840 41.667 0.00 0.00 0.00 4.20
2121 12127 4.437239 AGAAGCTACTCAAATCCATGACG 58.563 43.478 0.00 0.00 0.00 4.35
2122 12128 6.749923 AAAGAAGCTACTCAAATCCATGAC 57.250 37.500 0.00 0.00 0.00 3.06
2123 12129 8.896744 CAATAAAGAAGCTACTCAAATCCATGA 58.103 33.333 0.00 0.00 0.00 3.07
2124 12130 7.646922 GCAATAAAGAAGCTACTCAAATCCATG 59.353 37.037 0.00 0.00 0.00 3.66
2125 12131 7.467811 CGCAATAAAGAAGCTACTCAAATCCAT 60.468 37.037 0.00 0.00 0.00 3.41
2126 12132 6.183360 CGCAATAAAGAAGCTACTCAAATCCA 60.183 38.462 0.00 0.00 0.00 3.41
2127 12133 6.195165 CGCAATAAAGAAGCTACTCAAATCC 58.805 40.000 0.00 0.00 0.00 3.01
2128 12134 5.678919 GCGCAATAAAGAAGCTACTCAAATC 59.321 40.000 0.30 0.00 0.00 2.17
2129 12135 5.449177 GGCGCAATAAAGAAGCTACTCAAAT 60.449 40.000 10.83 0.00 0.00 2.32
2130 12136 4.142687 GGCGCAATAAAGAAGCTACTCAAA 60.143 41.667 10.83 0.00 0.00 2.69
2131 12137 3.374058 GGCGCAATAAAGAAGCTACTCAA 59.626 43.478 10.83 0.00 0.00 3.02
2132 12138 2.936498 GGCGCAATAAAGAAGCTACTCA 59.064 45.455 10.83 0.00 0.00 3.41
2133 12139 2.033662 CGGCGCAATAAAGAAGCTACTC 60.034 50.000 10.83 0.00 0.00 2.59
2134 12140 1.933853 CGGCGCAATAAAGAAGCTACT 59.066 47.619 10.83 0.00 0.00 2.57
2135 12141 1.003866 CCGGCGCAATAAAGAAGCTAC 60.004 52.381 10.83 0.00 0.00 3.58
2136 12142 1.295792 CCGGCGCAATAAAGAAGCTA 58.704 50.000 10.83 0.00 0.00 3.32
2137 12143 0.676782 ACCGGCGCAATAAAGAAGCT 60.677 50.000 10.83 0.00 0.00 3.74
2138 12144 1.011333 TACCGGCGCAATAAAGAAGC 58.989 50.000 10.83 0.00 0.00 3.86
2139 12145 3.131396 AGATACCGGCGCAATAAAGAAG 58.869 45.455 10.83 0.00 0.00 2.85
2140 12146 3.188159 AGATACCGGCGCAATAAAGAA 57.812 42.857 10.83 0.00 0.00 2.52
2141 12147 2.902705 AGATACCGGCGCAATAAAGA 57.097 45.000 10.83 0.00 0.00 2.52
2142 12148 3.131396 AGAAGATACCGGCGCAATAAAG 58.869 45.455 10.83 0.00 0.00 1.85
2143 12149 3.188159 AGAAGATACCGGCGCAATAAA 57.812 42.857 10.83 0.00 0.00 1.40
2144 12150 2.902705 AGAAGATACCGGCGCAATAA 57.097 45.000 10.83 0.00 0.00 1.40
2145 12151 2.364324 AGAAGAAGATACCGGCGCAATA 59.636 45.455 10.83 0.00 0.00 1.90
2146 12152 1.139058 AGAAGAAGATACCGGCGCAAT 59.861 47.619 10.83 0.00 0.00 3.56
2147 12153 0.535335 AGAAGAAGATACCGGCGCAA 59.465 50.000 10.83 0.00 0.00 4.85
2148 12154 0.179111 CAGAAGAAGATACCGGCGCA 60.179 55.000 10.83 0.00 0.00 6.09
2149 12155 1.491505 GCAGAAGAAGATACCGGCGC 61.492 60.000 0.00 0.00 0.00 6.53
2150 12156 0.179111 TGCAGAAGAAGATACCGGCG 60.179 55.000 0.00 0.00 0.00 6.46
2151 12157 2.024176 TTGCAGAAGAAGATACCGGC 57.976 50.000 0.00 0.00 0.00 6.13
2152 12158 3.600388 ACTTTGCAGAAGAAGATACCGG 58.400 45.455 0.00 0.00 0.00 5.28
2153 12159 5.411781 AGTACTTTGCAGAAGAAGATACCG 58.588 41.667 13.35 0.00 0.00 4.02
2154 12160 5.813157 GGAGTACTTTGCAGAAGAAGATACC 59.187 44.000 13.35 4.10 0.00 2.73
2155 12161 5.813157 GGGAGTACTTTGCAGAAGAAGATAC 59.187 44.000 13.35 7.60 0.00 2.24
2156 12162 5.721960 AGGGAGTACTTTGCAGAAGAAGATA 59.278 40.000 13.35 0.00 0.00 1.98
2157 12163 4.534103 AGGGAGTACTTTGCAGAAGAAGAT 59.466 41.667 13.35 0.00 0.00 2.40
2158 12164 3.904339 AGGGAGTACTTTGCAGAAGAAGA 59.096 43.478 13.35 0.00 0.00 2.87
2159 12165 4.020662 AGAGGGAGTACTTTGCAGAAGAAG 60.021 45.833 13.35 5.20 0.00 2.85
2160 12166 3.904339 AGAGGGAGTACTTTGCAGAAGAA 59.096 43.478 13.35 0.00 0.00 2.52
2161 12167 3.259374 CAGAGGGAGTACTTTGCAGAAGA 59.741 47.826 13.35 0.00 0.00 2.87
2162 12168 3.007398 ACAGAGGGAGTACTTTGCAGAAG 59.993 47.826 0.00 6.98 0.00 2.85
2163 12169 2.972713 ACAGAGGGAGTACTTTGCAGAA 59.027 45.455 0.00 0.00 0.00 3.02
2164 12170 2.609747 ACAGAGGGAGTACTTTGCAGA 58.390 47.619 0.00 0.00 0.00 4.26
2165 12171 3.409026 AACAGAGGGAGTACTTTGCAG 57.591 47.619 0.00 0.00 0.00 4.41
2166 12172 3.857157 AAACAGAGGGAGTACTTTGCA 57.143 42.857 0.00 0.00 0.00 4.08
2167 12173 4.822350 AGAAAAACAGAGGGAGTACTTTGC 59.178 41.667 0.00 0.00 0.00 3.68
2168 12174 6.944234 AAGAAAAACAGAGGGAGTACTTTG 57.056 37.500 0.00 0.00 0.00 2.77
2169 12175 7.956328 AAAAGAAAAACAGAGGGAGTACTTT 57.044 32.000 0.00 0.00 0.00 2.66
2170 12176 9.642343 AATAAAAGAAAAACAGAGGGAGTACTT 57.358 29.630 0.00 0.00 0.00 2.24
2171 12177 9.286170 GAATAAAAGAAAAACAGAGGGAGTACT 57.714 33.333 0.00 0.00 0.00 2.73
2172 12178 9.286170 AGAATAAAAGAAAAACAGAGGGAGTAC 57.714 33.333 0.00 0.00 0.00 2.73
2173 12179 9.284968 CAGAATAAAAGAAAAACAGAGGGAGTA 57.715 33.333 0.00 0.00 0.00 2.59
2174 12180 7.255625 GCAGAATAAAAGAAAAACAGAGGGAGT 60.256 37.037 0.00 0.00 0.00 3.85
2175 12181 7.087007 GCAGAATAAAAGAAAAACAGAGGGAG 58.913 38.462 0.00 0.00 0.00 4.30
2176 12182 6.549364 TGCAGAATAAAAGAAAAACAGAGGGA 59.451 34.615 0.00 0.00 0.00 4.20
2177 12183 6.748132 TGCAGAATAAAAGAAAAACAGAGGG 58.252 36.000 0.00 0.00 0.00 4.30
2194 12200 8.709308 ACTCAGGACTAAACTAATATGCAGAAT 58.291 33.333 0.00 0.00 0.00 2.40
2195 12201 8.079211 ACTCAGGACTAAACTAATATGCAGAA 57.921 34.615 0.00 0.00 0.00 3.02
2196 12202 7.661536 ACTCAGGACTAAACTAATATGCAGA 57.338 36.000 0.00 0.00 0.00 4.26
2197 12203 7.981789 TCAACTCAGGACTAAACTAATATGCAG 59.018 37.037 0.00 0.00 0.00 4.41
2198 12204 7.847096 TCAACTCAGGACTAAACTAATATGCA 58.153 34.615 0.00 0.00 0.00 3.96
2199 12205 8.604890 GTTCAACTCAGGACTAAACTAATATGC 58.395 37.037 0.00 0.00 0.00 3.14
2200 12206 9.877178 AGTTCAACTCAGGACTAAACTAATATG 57.123 33.333 0.00 0.00 0.00 1.78
2362 12368 8.637986 AGCAAAGATTGTAAACTATGACCAAAA 58.362 29.630 0.00 0.00 0.00 2.44
2403 12445 9.799106 CATACTATCTCCCTTTTTATCCACATT 57.201 33.333 0.00 0.00 0.00 2.71
2435 12477 1.282157 AGATCTAGCCACGCCCTTTTT 59.718 47.619 0.00 0.00 0.00 1.94
2436 12478 0.912486 AGATCTAGCCACGCCCTTTT 59.088 50.000 0.00 0.00 0.00 2.27
2437 12479 0.466124 GAGATCTAGCCACGCCCTTT 59.534 55.000 0.00 0.00 0.00 3.11
2438 12480 0.687757 TGAGATCTAGCCACGCCCTT 60.688 55.000 0.00 0.00 0.00 3.95
2439 12481 1.075970 TGAGATCTAGCCACGCCCT 60.076 57.895 0.00 0.00 0.00 5.19
2440 12482 1.365633 CTGAGATCTAGCCACGCCC 59.634 63.158 0.00 0.00 0.00 6.13
2441 12483 0.031449 GACTGAGATCTAGCCACGCC 59.969 60.000 0.00 0.00 0.00 5.68
2442 12484 0.317436 CGACTGAGATCTAGCCACGC 60.317 60.000 0.00 0.00 0.00 5.34
2443 12485 1.003331 GTCGACTGAGATCTAGCCACG 60.003 57.143 8.70 0.00 0.00 4.94
2444 12486 2.032799 CAGTCGACTGAGATCTAGCCAC 59.967 54.545 36.73 0.00 46.59 5.01
2445 12487 2.293170 CAGTCGACTGAGATCTAGCCA 58.707 52.381 36.73 0.00 46.59 4.75
2455 12497 6.438740 ACTTGGTTAAGTCTCAGTCGACTGA 61.439 44.000 38.24 38.24 45.53 3.41
2456 12498 3.917329 TGGTTAAGTCTCAGTCGACTG 57.083 47.619 34.76 34.76 43.14 3.51
2457 12499 3.890147 ACTTGGTTAAGTCTCAGTCGACT 59.110 43.478 13.58 13.58 43.53 4.18
2458 12500 4.240175 ACTTGGTTAAGTCTCAGTCGAC 57.760 45.455 7.70 7.70 43.53 4.20
2459 12501 4.931661 AACTTGGTTAAGTCTCAGTCGA 57.068 40.909 0.00 0.00 46.14 4.20
2460 12502 5.047847 TGAAACTTGGTTAAGTCTCAGTCG 58.952 41.667 0.00 0.00 46.14 4.18
2464 12506 5.984725 TGACTGAAACTTGGTTAAGTCTCA 58.015 37.500 14.85 0.00 46.14 3.27
2465 12507 6.539103 ACTTGACTGAAACTTGGTTAAGTCTC 59.461 38.462 14.85 0.00 46.14 3.36
2466 12508 6.316390 CACTTGACTGAAACTTGGTTAAGTCT 59.684 38.462 14.85 0.00 46.14 3.24
2467 12509 6.315393 TCACTTGACTGAAACTTGGTTAAGTC 59.685 38.462 8.58 8.58 46.14 3.01
2468 12510 6.093633 GTCACTTGACTGAAACTTGGTTAAGT 59.906 38.462 1.92 0.00 43.79 2.24
2469 12511 6.093495 TGTCACTTGACTGAAACTTGGTTAAG 59.907 38.462 10.63 0.00 44.99 1.85
2470 12512 5.941058 TGTCACTTGACTGAAACTTGGTTAA 59.059 36.000 10.63 0.00 44.99 2.01
2471 12513 5.492895 TGTCACTTGACTGAAACTTGGTTA 58.507 37.500 10.63 0.00 44.99 2.85
2472 12514 4.331968 TGTCACTTGACTGAAACTTGGTT 58.668 39.130 10.63 0.00 44.99 3.67
2473 12515 3.941483 CTGTCACTTGACTGAAACTTGGT 59.059 43.478 10.63 0.00 44.99 3.67
2474 12516 4.191544 TCTGTCACTTGACTGAAACTTGG 58.808 43.478 14.52 0.00 45.66 3.61
2481 12523 8.147704 TGTTTATATGTTCTGTCACTTGACTGA 58.852 33.333 13.26 13.26 46.52 3.41
2482 12524 8.310406 TGTTTATATGTTCTGTCACTTGACTG 57.690 34.615 10.63 9.97 44.99 3.51
2483 12525 8.367911 TCTGTTTATATGTTCTGTCACTTGACT 58.632 33.333 10.63 0.00 44.99 3.41
2484 12526 8.534333 TCTGTTTATATGTTCTGTCACTTGAC 57.466 34.615 2.19 2.19 44.97 3.18
2485 12527 9.554395 TTTCTGTTTATATGTTCTGTCACTTGA 57.446 29.630 0.00 0.00 0.00 3.02
2502 12544 9.818796 GTGCAAAATTTTGTCTTTTTCTGTTTA 57.181 25.926 27.13 2.49 40.24 2.01
2503 12545 8.348507 TGTGCAAAATTTTGTCTTTTTCTGTTT 58.651 25.926 27.13 0.00 40.24 2.83
2504 12546 7.869800 TGTGCAAAATTTTGTCTTTTTCTGTT 58.130 26.923 27.13 0.00 40.24 3.16
2505 12547 7.387397 TCTGTGCAAAATTTTGTCTTTTTCTGT 59.613 29.630 27.13 0.00 40.24 3.41
2506 12548 7.741198 TCTGTGCAAAATTTTGTCTTTTTCTG 58.259 30.769 27.13 14.84 40.24 3.02
2507 12549 7.903995 TCTGTGCAAAATTTTGTCTTTTTCT 57.096 28.000 27.13 0.00 40.24 2.52
2508 12550 8.606602 AGATCTGTGCAAAATTTTGTCTTTTTC 58.393 29.630 27.13 18.34 40.24 2.29
2509 12551 8.496707 AGATCTGTGCAAAATTTTGTCTTTTT 57.503 26.923 27.13 12.26 40.24 1.94
2510 12552 7.225341 GGAGATCTGTGCAAAATTTTGTCTTTT 59.775 33.333 27.13 11.83 40.24 2.27
2511 12553 6.703165 GGAGATCTGTGCAAAATTTTGTCTTT 59.297 34.615 27.13 11.37 40.24 2.52
2512 12554 6.183360 TGGAGATCTGTGCAAAATTTTGTCTT 60.183 34.615 27.13 10.48 40.24 3.01
2513 12555 5.302568 TGGAGATCTGTGCAAAATTTTGTCT 59.697 36.000 27.13 20.98 40.24 3.41
2514 12556 5.531634 TGGAGATCTGTGCAAAATTTTGTC 58.468 37.500 27.13 20.36 40.24 3.18
2515 12557 5.534207 TGGAGATCTGTGCAAAATTTTGT 57.466 34.783 27.13 10.37 40.24 2.83
2516 12558 9.806203 TTATATGGAGATCTGTGCAAAATTTTG 57.194 29.630 23.74 23.74 41.03 2.44
2518 12560 9.412460 TCTTATATGGAGATCTGTGCAAAATTT 57.588 29.630 0.00 0.00 0.00 1.82
2519 12561 8.985315 TCTTATATGGAGATCTGTGCAAAATT 57.015 30.769 0.00 0.00 0.00 1.82
2522 12564 9.881649 GATATCTTATATGGAGATCTGTGCAAA 57.118 33.333 0.00 0.00 35.56 3.68
2523 12565 9.039165 TGATATCTTATATGGAGATCTGTGCAA 57.961 33.333 0.00 0.00 35.56 4.08
2524 12566 8.599624 TGATATCTTATATGGAGATCTGTGCA 57.400 34.615 0.00 0.00 35.56 4.57
2525 12567 9.478768 CATGATATCTTATATGGAGATCTGTGC 57.521 37.037 0.00 0.00 35.56 4.57
2541 12583 7.864882 CGGTCGATGCTATATTCATGATATCTT 59.135 37.037 3.98 0.00 33.09 2.40
2542 12584 7.229506 TCGGTCGATGCTATATTCATGATATCT 59.770 37.037 3.98 0.00 33.09 1.98
2543 12585 7.363431 TCGGTCGATGCTATATTCATGATATC 58.637 38.462 0.00 0.00 33.09 1.63
2544 12586 7.229506 TCTCGGTCGATGCTATATTCATGATAT 59.770 37.037 0.00 0.00 35.19 1.63
2545 12587 6.542370 TCTCGGTCGATGCTATATTCATGATA 59.458 38.462 0.00 0.00 0.00 2.15
2546 12588 5.358160 TCTCGGTCGATGCTATATTCATGAT 59.642 40.000 0.00 0.00 0.00 2.45
2547 12589 4.700213 TCTCGGTCGATGCTATATTCATGA 59.300 41.667 0.00 0.00 0.00 3.07
2548 12590 4.795795 GTCTCGGTCGATGCTATATTCATG 59.204 45.833 0.00 0.00 0.00 3.07
2549 12591 4.702612 AGTCTCGGTCGATGCTATATTCAT 59.297 41.667 0.00 0.00 0.00 2.57
2550 12592 4.072839 AGTCTCGGTCGATGCTATATTCA 58.927 43.478 0.00 0.00 0.00 2.57
2551 12593 4.688511 AGTCTCGGTCGATGCTATATTC 57.311 45.455 0.00 0.00 0.00 1.75
2552 12594 5.221263 ACAAAGTCTCGGTCGATGCTATATT 60.221 40.000 0.00 0.00 0.00 1.28
2553 12595 4.278669 ACAAAGTCTCGGTCGATGCTATAT 59.721 41.667 0.00 0.00 0.00 0.86
2554 12596 3.630769 ACAAAGTCTCGGTCGATGCTATA 59.369 43.478 0.00 0.00 0.00 1.31
2555 12597 2.427453 ACAAAGTCTCGGTCGATGCTAT 59.573 45.455 0.00 0.00 0.00 2.97
2556 12598 1.816835 ACAAAGTCTCGGTCGATGCTA 59.183 47.619 0.00 0.00 0.00 3.49
2557 12599 0.603569 ACAAAGTCTCGGTCGATGCT 59.396 50.000 0.00 0.00 0.00 3.79
2558 12600 1.429463 AACAAAGTCTCGGTCGATGC 58.571 50.000 0.00 0.00 0.00 3.91
2559 12601 4.235360 ACTTAACAAAGTCTCGGTCGATG 58.765 43.478 0.00 0.00 0.00 3.84
2560 12602 4.483311 GACTTAACAAAGTCTCGGTCGAT 58.517 43.478 10.31 0.00 44.32 3.59
2561 12603 3.893720 GACTTAACAAAGTCTCGGTCGA 58.106 45.455 10.31 0.00 44.32 4.20
2584 12626 6.210078 GGGATTACTAAATCTCAGTCGACTG 58.790 44.000 34.76 34.76 41.55 3.51
2585 12627 5.008811 CGGGATTACTAAATCTCAGTCGACT 59.991 44.000 13.58 13.58 41.95 4.18
2586 12628 5.008415 TCGGGATTACTAAATCTCAGTCGAC 59.992 44.000 7.70 7.70 41.95 4.20
2587 12629 5.128205 TCGGGATTACTAAATCTCAGTCGA 58.872 41.667 0.00 0.00 41.95 4.20
2588 12630 5.434352 TCGGGATTACTAAATCTCAGTCG 57.566 43.478 0.00 0.00 41.95 4.18
2599 12641 9.938280 CCATCTGTTTTTATATCGGGATTACTA 57.062 33.333 0.00 0.00 0.00 1.82
2600 12642 8.656806 TCCATCTGTTTTTATATCGGGATTACT 58.343 33.333 0.00 0.00 0.00 2.24
2601 12643 8.842358 TCCATCTGTTTTTATATCGGGATTAC 57.158 34.615 0.00 0.00 0.00 1.89
2602 12644 9.854668 TTTCCATCTGTTTTTATATCGGGATTA 57.145 29.630 0.00 0.00 0.00 1.75
2603 12645 8.760980 TTTCCATCTGTTTTTATATCGGGATT 57.239 30.769 0.00 0.00 0.00 3.01
2604 12646 8.217799 TCTTTCCATCTGTTTTTATATCGGGAT 58.782 33.333 0.00 0.00 0.00 3.85
2605 12647 7.497909 GTCTTTCCATCTGTTTTTATATCGGGA 59.502 37.037 0.00 0.00 0.00 5.14
2606 12648 7.282224 TGTCTTTCCATCTGTTTTTATATCGGG 59.718 37.037 0.00 0.00 0.00 5.14
2607 12649 8.122952 GTGTCTTTCCATCTGTTTTTATATCGG 58.877 37.037 0.00 0.00 0.00 4.18
2608 12650 8.122952 GGTGTCTTTCCATCTGTTTTTATATCG 58.877 37.037 0.00 0.00 0.00 2.92
2609 12651 9.178758 AGGTGTCTTTCCATCTGTTTTTATATC 57.821 33.333 0.00 0.00 0.00 1.63
2643 12685 2.661176 ATTCCCTGGAGGTTCTACCA 57.339 50.000 0.00 0.00 41.95 3.25
2657 12699 3.732048 TTGTTGAACCCTCCTATTCCC 57.268 47.619 0.00 0.00 0.00 3.97
2662 12704 7.780745 TCACTTTAATTTTGTTGAACCCTCCTA 59.219 33.333 0.00 0.00 0.00 2.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.