Multiple sequence alignment - TraesCS4D01G012600
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS4D01G012600 | chr4D | 100.000 | 3694 | 0 | 0 | 1 | 3694 | 5811181 | 5814874 | 0.000000e+00 | 6822.0 |
1 | TraesCS4D01G012600 | chr4A | 94.283 | 2484 | 88 | 15 | 465 | 2895 | 597726518 | 597724036 | 0.000000e+00 | 3751.0 |
2 | TraesCS4D01G012600 | chr4A | 95.770 | 662 | 25 | 3 | 2936 | 3595 | 597723790 | 597723130 | 0.000000e+00 | 1064.0 |
3 | TraesCS4D01G012600 | chr4A | 93.893 | 131 | 8 | 0 | 3564 | 3694 | 597723105 | 597722975 | 8.090000e-47 | 198.0 |
4 | TraesCS4D01G012600 | chr4A | 88.608 | 79 | 7 | 2 | 3562 | 3640 | 400761554 | 400761478 | 1.090000e-15 | 95.3 |
5 | TraesCS4D01G012600 | chr4A | 97.436 | 39 | 1 | 0 | 3654 | 3692 | 660149856 | 660149818 | 2.380000e-07 | 67.6 |
6 | TraesCS4D01G012600 | chr4B | 92.818 | 2534 | 104 | 33 | 443 | 2906 | 10516437 | 10518962 | 0.000000e+00 | 3600.0 |
7 | TraesCS4D01G012600 | chr4B | 93.623 | 737 | 46 | 1 | 1595 | 2331 | 10532501 | 10533236 | 0.000000e+00 | 1099.0 |
8 | TraesCS4D01G012600 | chr4B | 95.915 | 661 | 22 | 4 | 2936 | 3595 | 10519177 | 10519833 | 0.000000e+00 | 1066.0 |
9 | TraesCS4D01G012600 | chr4B | 87.127 | 637 | 40 | 12 | 2329 | 2938 | 10536746 | 10537367 | 0.000000e+00 | 684.0 |
10 | TraesCS4D01G012600 | chr4B | 94.574 | 129 | 6 | 1 | 3566 | 3694 | 10520204 | 10520331 | 8.090000e-47 | 198.0 |
11 | TraesCS4D01G012600 | chr7B | 95.778 | 379 | 11 | 3 | 2936 | 3309 | 16088117 | 16087739 | 1.130000e-169 | 606.0 |
12 | TraesCS4D01G012600 | chr7B | 91.586 | 309 | 23 | 3 | 140 | 445 | 728122408 | 728122716 | 1.230000e-114 | 424.0 |
13 | TraesCS4D01G012600 | chr7B | 94.258 | 209 | 11 | 1 | 2730 | 2938 | 16088555 | 16088348 | 5.950000e-83 | 318.0 |
14 | TraesCS4D01G012600 | chr6B | 95.515 | 379 | 12 | 3 | 2936 | 3309 | 96107184 | 96107562 | 5.280000e-168 | 601.0 |
15 | TraesCS4D01G012600 | chr6B | 94.709 | 378 | 16 | 3 | 2936 | 3309 | 219822881 | 219822504 | 5.320000e-163 | 584.0 |
16 | TraesCS4D01G012600 | chr6B | 93.780 | 209 | 13 | 0 | 2730 | 2938 | 219823320 | 219823112 | 7.700000e-82 | 315.0 |
17 | TraesCS4D01G012600 | chr6B | 93.780 | 209 | 12 | 1 | 2730 | 2938 | 96106746 | 96106953 | 2.770000e-81 | 313.0 |
18 | TraesCS4D01G012600 | chr6B | 94.521 | 73 | 3 | 1 | 2866 | 2938 | 711118076 | 711118005 | 1.080000e-20 | 111.0 |
19 | TraesCS4D01G012600 | chr6B | 100.000 | 34 | 0 | 0 | 3659 | 3692 | 617809842 | 617809875 | 3.080000e-06 | 63.9 |
20 | TraesCS4D01G012600 | chr5B | 95.238 | 378 | 14 | 3 | 2936 | 3309 | 287634281 | 287634658 | 2.460000e-166 | 595.0 |
21 | TraesCS4D01G012600 | chr5B | 93.780 | 209 | 12 | 1 | 2730 | 2938 | 287633843 | 287634050 | 2.770000e-81 | 313.0 |
22 | TraesCS4D01G012600 | chr7D | 91.531 | 307 | 24 | 2 | 140 | 444 | 141345336 | 141345642 | 4.410000e-114 | 422.0 |
23 | TraesCS4D01G012600 | chr7D | 91.419 | 303 | 24 | 2 | 138 | 439 | 49806896 | 49806595 | 7.380000e-112 | 414.0 |
24 | TraesCS4D01G012600 | chr7D | 100.000 | 34 | 0 | 0 | 3659 | 3692 | 366610169 | 366610136 | 3.080000e-06 | 63.9 |
25 | TraesCS4D01G012600 | chr7D | 97.143 | 35 | 1 | 0 | 3658 | 3692 | 257512119 | 257512085 | 3.980000e-05 | 60.2 |
26 | TraesCS4D01G012600 | chr2D | 91.722 | 302 | 23 | 2 | 140 | 439 | 618294475 | 618294776 | 5.710000e-113 | 418.0 |
27 | TraesCS4D01G012600 | chr1B | 91.694 | 301 | 24 | 1 | 140 | 439 | 484457856 | 484457556 | 2.050000e-112 | 416.0 |
28 | TraesCS4D01G012600 | chr1B | 91.694 | 301 | 22 | 3 | 142 | 439 | 683991873 | 683992173 | 7.380000e-112 | 414.0 |
29 | TraesCS4D01G012600 | chr2B | 90.939 | 309 | 26 | 2 | 140 | 446 | 798707257 | 798707565 | 7.380000e-112 | 414.0 |
30 | TraesCS4D01G012600 | chr5D | 91.205 | 307 | 22 | 5 | 137 | 439 | 120920778 | 120921083 | 2.650000e-111 | 412.0 |
31 | TraesCS4D01G012600 | chr3B | 90.820 | 305 | 26 | 2 | 140 | 443 | 119949700 | 119950003 | 1.240000e-109 | 407.0 |
32 | TraesCS4D01G012600 | chr7A | 94.186 | 86 | 5 | 0 | 1256 | 1341 | 549411416 | 549411331 | 8.320000e-27 | 132.0 |
33 | TraesCS4D01G012600 | chr7A | 92.500 | 80 | 6 | 0 | 1256 | 1335 | 705593513 | 705593592 | 8.380000e-22 | 115.0 |
34 | TraesCS4D01G012600 | chr7A | 97.368 | 38 | 0 | 1 | 3658 | 3694 | 153261487 | 153261450 | 3.080000e-06 | 63.9 |
35 | TraesCS4D01G012600 | chr7A | 97.222 | 36 | 0 | 1 | 3658 | 3692 | 48296443 | 48296408 | 3.980000e-05 | 60.2 |
36 | TraesCS4D01G012600 | chr6A | 98.611 | 72 | 1 | 0 | 1651 | 1722 | 601396095 | 601396166 | 1.080000e-25 | 128.0 |
37 | TraesCS4D01G012600 | chr6A | 91.954 | 87 | 5 | 2 | 1256 | 1341 | 601395938 | 601396023 | 1.800000e-23 | 121.0 |
38 | TraesCS4D01G012600 | chr3A | 98.462 | 65 | 1 | 0 | 1662 | 1726 | 28479273 | 28479209 | 8.380000e-22 | 115.0 |
39 | TraesCS4D01G012600 | chr3A | 98.462 | 65 | 1 | 0 | 1662 | 1726 | 34058451 | 34058387 | 8.380000e-22 | 115.0 |
40 | TraesCS4D01G012600 | chr3A | 95.833 | 72 | 2 | 1 | 1662 | 1732 | 34260212 | 34260141 | 8.380000e-22 | 115.0 |
41 | TraesCS4D01G012600 | chr3A | 92.405 | 79 | 6 | 0 | 1256 | 1334 | 652108967 | 652108889 | 3.020000e-21 | 113.0 |
42 | TraesCS4D01G012600 | chr3A | 94.444 | 72 | 3 | 1 | 1651 | 1722 | 652108810 | 652108740 | 3.900000e-20 | 110.0 |
43 | TraesCS4D01G012600 | chr5A | 94.595 | 74 | 1 | 2 | 1662 | 1732 | 637620466 | 637620393 | 1.080000e-20 | 111.0 |
44 | TraesCS4D01G012600 | chr1A | 97.222 | 36 | 0 | 1 | 3658 | 3692 | 375114946 | 375114911 | 3.980000e-05 | 60.2 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS4D01G012600 | chr4D | 5811181 | 5814874 | 3693 | False | 6822.000000 | 6822 | 100.000000 | 1 | 3694 | 1 | chr4D.!!$F1 | 3693 |
1 | TraesCS4D01G012600 | chr4A | 597722975 | 597726518 | 3543 | True | 1671.000000 | 3751 | 94.648667 | 465 | 3694 | 3 | chr4A.!!$R3 | 3229 |
2 | TraesCS4D01G012600 | chr4B | 10516437 | 10520331 | 3894 | False | 1621.333333 | 3600 | 94.435667 | 443 | 3694 | 3 | chr4B.!!$F1 | 3251 |
3 | TraesCS4D01G012600 | chr4B | 10532501 | 10537367 | 4866 | False | 891.500000 | 1099 | 90.375000 | 1595 | 2938 | 2 | chr4B.!!$F2 | 1343 |
4 | TraesCS4D01G012600 | chr7B | 16087739 | 16088555 | 816 | True | 462.000000 | 606 | 95.018000 | 2730 | 3309 | 2 | chr7B.!!$R1 | 579 |
5 | TraesCS4D01G012600 | chr6B | 96106746 | 96107562 | 816 | False | 457.000000 | 601 | 94.647500 | 2730 | 3309 | 2 | chr6B.!!$F2 | 579 |
6 | TraesCS4D01G012600 | chr6B | 219822504 | 219823320 | 816 | True | 449.500000 | 584 | 94.244500 | 2730 | 3309 | 2 | chr6B.!!$R2 | 579 |
7 | TraesCS4D01G012600 | chr5B | 287633843 | 287634658 | 815 | False | 454.000000 | 595 | 94.509000 | 2730 | 3309 | 2 | chr5B.!!$F1 | 579 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
250 | 251 | 0.035598 | TGTTTCAGGATTTCCGGCGA | 59.964 | 50.0 | 9.30 | 0.0 | 42.08 | 5.54 | F |
390 | 391 | 0.036765 | GTGTGCGTTCATAGGGGTGA | 60.037 | 55.0 | 0.00 | 0.0 | 0.00 | 4.02 | F |
391 | 392 | 0.249120 | TGTGCGTTCATAGGGGTGAG | 59.751 | 55.0 | 0.00 | 0.0 | 0.00 | 3.51 | F |
424 | 425 | 0.249322 | ATATTAGCGCTTGCGTCCGT | 60.249 | 50.0 | 18.68 | 0.0 | 45.69 | 4.69 | F |
426 | 427 | 0.249322 | ATTAGCGCTTGCGTCCGTAT | 60.249 | 50.0 | 18.68 | 0.0 | 45.69 | 3.06 | F |
428 | 429 | 0.381445 | TAGCGCTTGCGTCCGTATTA | 59.619 | 50.0 | 18.68 | 0.0 | 45.69 | 0.98 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1800 | 1861 | 0.545548 | AGGAACCGGAGAAGGAAGCT | 60.546 | 55.000 | 9.46 | 0.0 | 34.73 | 3.74 | R |
1839 | 1903 | 2.285743 | GTCTTGCCCTCCCTCCCT | 60.286 | 66.667 | 0.00 | 0.0 | 0.00 | 4.20 | R |
2562 | 6138 | 4.416601 | CCCTTCCTCCCCCTCCGT | 62.417 | 72.222 | 0.00 | 0.0 | 0.00 | 4.69 | R |
2580 | 6156 | 2.819595 | CGTATGGCGCCACTGCTT | 60.820 | 61.111 | 35.50 | 19.1 | 34.43 | 3.91 | R |
2586 | 6162 | 4.823419 | CCGAACCGTATGGCGCCA | 62.823 | 66.667 | 34.80 | 34.8 | 39.70 | 5.69 | R |
2751 | 6354 | 1.874872 | ACCACGGTAAAAACACATCGG | 59.125 | 47.619 | 0.00 | 0.0 | 0.00 | 4.18 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
32 | 33 | 6.975196 | AAAAAGCCTTGGCCAAATTATTTT | 57.025 | 29.167 | 20.91 | 19.43 | 0.00 | 1.82 |
33 | 34 | 6.975196 | AAAAGCCTTGGCCAAATTATTTTT | 57.025 | 29.167 | 20.91 | 17.00 | 0.00 | 1.94 |
34 | 35 | 8.470657 | AAAAAGCCTTGGCCAAATTATTTTTA | 57.529 | 26.923 | 25.93 | 4.36 | 0.00 | 1.52 |
35 | 36 | 7.447374 | AAAGCCTTGGCCAAATTATTTTTAC | 57.553 | 32.000 | 20.91 | 0.00 | 0.00 | 2.01 |
36 | 37 | 5.175127 | AGCCTTGGCCAAATTATTTTTACG | 58.825 | 37.500 | 20.91 | 2.67 | 0.00 | 3.18 |
37 | 38 | 4.201773 | GCCTTGGCCAAATTATTTTTACGC | 60.202 | 41.667 | 20.91 | 3.07 | 0.00 | 4.42 |
38 | 39 | 4.032331 | CCTTGGCCAAATTATTTTTACGCG | 59.968 | 41.667 | 20.91 | 3.53 | 0.00 | 6.01 |
39 | 40 | 4.436242 | TGGCCAAATTATTTTTACGCGA | 57.564 | 36.364 | 15.93 | 0.00 | 0.00 | 5.87 |
40 | 41 | 4.167268 | TGGCCAAATTATTTTTACGCGAC | 58.833 | 39.130 | 15.93 | 0.00 | 0.00 | 5.19 |
41 | 42 | 4.082679 | TGGCCAAATTATTTTTACGCGACT | 60.083 | 37.500 | 15.93 | 0.00 | 0.00 | 4.18 |
42 | 43 | 4.860352 | GGCCAAATTATTTTTACGCGACTT | 59.140 | 37.500 | 15.93 | 0.00 | 0.00 | 3.01 |
43 | 44 | 5.220135 | GGCCAAATTATTTTTACGCGACTTG | 60.220 | 40.000 | 15.93 | 0.00 | 0.00 | 3.16 |
44 | 45 | 5.343860 | GCCAAATTATTTTTACGCGACTTGT | 59.656 | 36.000 | 15.93 | 0.00 | 0.00 | 3.16 |
45 | 46 | 6.451960 | GCCAAATTATTTTTACGCGACTTGTC | 60.452 | 38.462 | 15.93 | 0.00 | 0.00 | 3.18 |
46 | 47 | 6.033091 | CCAAATTATTTTTACGCGACTTGTCC | 59.967 | 38.462 | 15.93 | 0.00 | 0.00 | 4.02 |
47 | 48 | 4.666928 | TTATTTTTACGCGACTTGTCCC | 57.333 | 40.909 | 15.93 | 0.00 | 0.00 | 4.46 |
48 | 49 | 2.243602 | TTTTTACGCGACTTGTCCCT | 57.756 | 45.000 | 15.93 | 0.00 | 0.00 | 4.20 |
49 | 50 | 3.383620 | TTTTTACGCGACTTGTCCCTA | 57.616 | 42.857 | 15.93 | 0.00 | 0.00 | 3.53 |
50 | 51 | 2.642139 | TTTACGCGACTTGTCCCTAG | 57.358 | 50.000 | 15.93 | 0.00 | 0.00 | 3.02 |
51 | 52 | 1.538047 | TTACGCGACTTGTCCCTAGT | 58.462 | 50.000 | 15.93 | 0.00 | 0.00 | 2.57 |
52 | 53 | 1.089920 | TACGCGACTTGTCCCTAGTC | 58.910 | 55.000 | 15.93 | 0.00 | 38.88 | 2.59 |
57 | 58 | 0.816373 | GACTTGTCCCTAGTCGGTCC | 59.184 | 60.000 | 0.00 | 0.00 | 33.39 | 4.46 |
58 | 59 | 0.614134 | ACTTGTCCCTAGTCGGTCCC | 60.614 | 60.000 | 0.00 | 0.00 | 0.00 | 4.46 |
59 | 60 | 0.613853 | CTTGTCCCTAGTCGGTCCCA | 60.614 | 60.000 | 0.00 | 0.00 | 0.00 | 4.37 |
60 | 61 | 0.178926 | TTGTCCCTAGTCGGTCCCAA | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 4.12 |
61 | 62 | 0.042131 | TGTCCCTAGTCGGTCCCAAT | 59.958 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
62 | 63 | 0.464452 | GTCCCTAGTCGGTCCCAATG | 59.536 | 60.000 | 0.00 | 0.00 | 0.00 | 2.82 |
63 | 64 | 0.689745 | TCCCTAGTCGGTCCCAATGG | 60.690 | 60.000 | 0.00 | 0.00 | 0.00 | 3.16 |
64 | 65 | 0.981277 | CCCTAGTCGGTCCCAATGGT | 60.981 | 60.000 | 0.00 | 0.00 | 0.00 | 3.55 |
65 | 66 | 0.909623 | CCTAGTCGGTCCCAATGGTT | 59.090 | 55.000 | 0.00 | 0.00 | 0.00 | 3.67 |
66 | 67 | 1.280998 | CCTAGTCGGTCCCAATGGTTT | 59.719 | 52.381 | 0.00 | 0.00 | 0.00 | 3.27 |
67 | 68 | 2.502538 | CCTAGTCGGTCCCAATGGTTTA | 59.497 | 50.000 | 0.00 | 0.00 | 0.00 | 2.01 |
68 | 69 | 2.484742 | AGTCGGTCCCAATGGTTTAC | 57.515 | 50.000 | 0.00 | 0.00 | 0.00 | 2.01 |
69 | 70 | 1.982958 | AGTCGGTCCCAATGGTTTACT | 59.017 | 47.619 | 0.00 | 0.00 | 0.00 | 2.24 |
70 | 71 | 2.374170 | AGTCGGTCCCAATGGTTTACTT | 59.626 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
71 | 72 | 2.486592 | GTCGGTCCCAATGGTTTACTTG | 59.513 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
72 | 73 | 1.201414 | CGGTCCCAATGGTTTACTTGC | 59.799 | 52.381 | 0.00 | 0.00 | 0.00 | 4.01 |
73 | 74 | 1.548719 | GGTCCCAATGGTTTACTTGCC | 59.451 | 52.381 | 0.00 | 0.00 | 0.00 | 4.52 |
74 | 75 | 2.525368 | GTCCCAATGGTTTACTTGCCT | 58.475 | 47.619 | 0.00 | 0.00 | 0.00 | 4.75 |
75 | 76 | 2.897326 | GTCCCAATGGTTTACTTGCCTT | 59.103 | 45.455 | 0.00 | 0.00 | 0.00 | 4.35 |
76 | 77 | 3.323691 | GTCCCAATGGTTTACTTGCCTTT | 59.676 | 43.478 | 0.00 | 0.00 | 0.00 | 3.11 |
77 | 78 | 3.970640 | TCCCAATGGTTTACTTGCCTTTT | 59.029 | 39.130 | 0.00 | 0.00 | 0.00 | 2.27 |
78 | 79 | 4.410555 | TCCCAATGGTTTACTTGCCTTTTT | 59.589 | 37.500 | 0.00 | 0.00 | 0.00 | 1.94 |
121 | 122 | 2.336341 | TGGCACAAAATGGACGACC | 58.664 | 52.632 | 0.00 | 0.00 | 31.92 | 4.79 |
122 | 123 | 1.175983 | TGGCACAAAATGGACGACCC | 61.176 | 55.000 | 0.34 | 0.00 | 31.92 | 4.46 |
123 | 124 | 3.816819 | TGGCACAAAATGGACGACCCA | 62.817 | 52.381 | 0.34 | 2.41 | 43.44 | 4.51 |
133 | 134 | 3.722908 | TGGACGACCCAAATATTCCAA | 57.277 | 42.857 | 0.34 | 0.00 | 43.29 | 3.53 |
134 | 135 | 4.035612 | TGGACGACCCAAATATTCCAAA | 57.964 | 40.909 | 0.34 | 0.00 | 43.29 | 3.28 |
135 | 136 | 4.605183 | TGGACGACCCAAATATTCCAAAT | 58.395 | 39.130 | 0.34 | 0.00 | 43.29 | 2.32 |
136 | 137 | 4.400884 | TGGACGACCCAAATATTCCAAATG | 59.599 | 41.667 | 0.34 | 0.00 | 43.29 | 2.32 |
137 | 138 | 4.401202 | GGACGACCCAAATATTCCAAATGT | 59.599 | 41.667 | 0.00 | 0.00 | 34.14 | 2.71 |
138 | 139 | 5.323371 | ACGACCCAAATATTCCAAATGTG | 57.677 | 39.130 | 0.00 | 0.00 | 0.00 | 3.21 |
139 | 140 | 8.559576 | GGACGACCCAAATATTCCAAATGTGG | 62.560 | 46.154 | 0.00 | 0.00 | 39.69 | 4.17 |
140 | 141 | 4.441792 | GACCCAAATATTCCAAATGTGGC | 58.558 | 43.478 | 0.00 | 0.00 | 45.54 | 5.01 |
141 | 142 | 3.118811 | ACCCAAATATTCCAAATGTGGCG | 60.119 | 43.478 | 0.00 | 0.00 | 45.54 | 5.69 |
142 | 143 | 3.131933 | CCCAAATATTCCAAATGTGGCGA | 59.868 | 43.478 | 0.00 | 0.00 | 45.54 | 5.54 |
143 | 144 | 4.382470 | CCCAAATATTCCAAATGTGGCGAA | 60.382 | 41.667 | 0.00 | 0.00 | 45.54 | 4.70 |
144 | 145 | 4.566360 | CCAAATATTCCAAATGTGGCGAAC | 59.434 | 41.667 | 0.00 | 0.00 | 45.54 | 3.95 |
145 | 146 | 4.385358 | AATATTCCAAATGTGGCGAACC | 57.615 | 40.909 | 0.00 | 0.00 | 45.54 | 3.62 |
146 | 147 | 1.626686 | ATTCCAAATGTGGCGAACCA | 58.373 | 45.000 | 0.00 | 0.00 | 45.54 | 3.67 |
154 | 155 | 2.911928 | TGGCGAACCAACCTGTGA | 59.088 | 55.556 | 0.00 | 0.00 | 45.37 | 3.58 |
155 | 156 | 1.454104 | TGGCGAACCAACCTGTGAT | 59.546 | 52.632 | 0.00 | 0.00 | 45.37 | 3.06 |
156 | 157 | 0.179004 | TGGCGAACCAACCTGTGATT | 60.179 | 50.000 | 0.00 | 0.00 | 45.37 | 2.57 |
157 | 158 | 0.240945 | GGCGAACCAACCTGTGATTG | 59.759 | 55.000 | 0.00 | 0.00 | 35.26 | 2.67 |
166 | 167 | 4.970662 | CAACCTGTGATTGGATGGTTAG | 57.029 | 45.455 | 0.00 | 0.00 | 38.76 | 2.34 |
167 | 168 | 4.588899 | CAACCTGTGATTGGATGGTTAGA | 58.411 | 43.478 | 0.00 | 0.00 | 38.76 | 2.10 |
168 | 169 | 4.494091 | ACCTGTGATTGGATGGTTAGAG | 57.506 | 45.455 | 0.00 | 0.00 | 0.00 | 2.43 |
169 | 170 | 3.200825 | ACCTGTGATTGGATGGTTAGAGG | 59.799 | 47.826 | 0.00 | 0.00 | 0.00 | 3.69 |
170 | 171 | 3.434167 | CCTGTGATTGGATGGTTAGAGGG | 60.434 | 52.174 | 0.00 | 0.00 | 0.00 | 4.30 |
171 | 172 | 3.455910 | CTGTGATTGGATGGTTAGAGGGA | 59.544 | 47.826 | 0.00 | 0.00 | 0.00 | 4.20 |
172 | 173 | 3.199946 | TGTGATTGGATGGTTAGAGGGAC | 59.800 | 47.826 | 0.00 | 0.00 | 0.00 | 4.46 |
174 | 175 | 3.455910 | TGATTGGATGGTTAGAGGGACTG | 59.544 | 47.826 | 0.00 | 0.00 | 41.55 | 3.51 |
175 | 176 | 2.642171 | TGGATGGTTAGAGGGACTGT | 57.358 | 50.000 | 0.00 | 0.00 | 41.55 | 3.55 |
176 | 177 | 2.187958 | TGGATGGTTAGAGGGACTGTG | 58.812 | 52.381 | 0.00 | 0.00 | 41.55 | 3.66 |
177 | 178 | 1.486726 | GGATGGTTAGAGGGACTGTGG | 59.513 | 57.143 | 0.00 | 0.00 | 41.55 | 4.17 |
178 | 179 | 2.188817 | GATGGTTAGAGGGACTGTGGT | 58.811 | 52.381 | 0.00 | 0.00 | 41.55 | 4.16 |
179 | 180 | 3.371965 | GATGGTTAGAGGGACTGTGGTA | 58.628 | 50.000 | 0.00 | 0.00 | 41.55 | 3.25 |
180 | 181 | 3.484953 | TGGTTAGAGGGACTGTGGTAT | 57.515 | 47.619 | 0.00 | 0.00 | 41.55 | 2.73 |
181 | 182 | 3.371965 | TGGTTAGAGGGACTGTGGTATC | 58.628 | 50.000 | 0.00 | 0.00 | 41.55 | 2.24 |
182 | 183 | 2.699321 | GGTTAGAGGGACTGTGGTATCC | 59.301 | 54.545 | 0.00 | 0.00 | 41.55 | 2.59 |
187 | 188 | 2.221918 | GGACTGTGGTATCCCCAGG | 58.778 | 63.158 | 3.65 | 0.00 | 46.45 | 4.45 |
188 | 189 | 1.527370 | GACTGTGGTATCCCCAGGC | 59.473 | 63.158 | 3.65 | 0.00 | 46.45 | 4.85 |
189 | 190 | 1.984288 | GACTGTGGTATCCCCAGGCC | 61.984 | 65.000 | 0.00 | 0.00 | 46.45 | 5.19 |
190 | 191 | 2.000701 | CTGTGGTATCCCCAGGCCA | 61.001 | 63.158 | 5.01 | 0.00 | 46.45 | 5.36 |
191 | 192 | 1.308657 | TGTGGTATCCCCAGGCCAT | 60.309 | 57.895 | 5.01 | 0.00 | 46.45 | 4.40 |
192 | 193 | 0.923729 | TGTGGTATCCCCAGGCCATT | 60.924 | 55.000 | 5.01 | 0.00 | 46.45 | 3.16 |
193 | 194 | 1.145571 | GTGGTATCCCCAGGCCATTA | 58.854 | 55.000 | 5.01 | 0.00 | 46.45 | 1.90 |
194 | 195 | 1.073923 | GTGGTATCCCCAGGCCATTAG | 59.926 | 57.143 | 5.01 | 0.00 | 46.45 | 1.73 |
195 | 196 | 0.698818 | GGTATCCCCAGGCCATTAGG | 59.301 | 60.000 | 5.01 | 0.22 | 38.23 | 2.69 |
196 | 197 | 0.698818 | GTATCCCCAGGCCATTAGGG | 59.301 | 60.000 | 5.01 | 10.73 | 42.44 | 3.53 |
197 | 198 | 0.273781 | TATCCCCAGGCCATTAGGGT | 59.726 | 55.000 | 17.93 | 6.92 | 41.16 | 4.34 |
198 | 199 | 0.630478 | ATCCCCAGGCCATTAGGGTT | 60.630 | 55.000 | 17.93 | 8.88 | 41.16 | 4.11 |
199 | 200 | 1.230212 | CCCCAGGCCATTAGGGTTC | 59.770 | 63.158 | 17.93 | 0.00 | 41.16 | 3.62 |
200 | 201 | 1.580066 | CCCCAGGCCATTAGGGTTCA | 61.580 | 60.000 | 17.93 | 0.00 | 41.16 | 3.18 |
201 | 202 | 0.334676 | CCCAGGCCATTAGGGTTCAA | 59.665 | 55.000 | 5.01 | 0.00 | 39.65 | 2.69 |
202 | 203 | 1.686115 | CCCAGGCCATTAGGGTTCAAG | 60.686 | 57.143 | 5.01 | 0.00 | 39.65 | 3.02 |
203 | 204 | 1.005924 | CCAGGCCATTAGGGTTCAAGT | 59.994 | 52.381 | 5.01 | 0.00 | 39.65 | 3.16 |
204 | 205 | 2.369394 | CAGGCCATTAGGGTTCAAGTC | 58.631 | 52.381 | 5.01 | 0.00 | 39.65 | 3.01 |
205 | 206 | 1.285078 | AGGCCATTAGGGTTCAAGTCC | 59.715 | 52.381 | 5.01 | 0.00 | 39.65 | 3.85 |
206 | 207 | 1.285078 | GGCCATTAGGGTTCAAGTCCT | 59.715 | 52.381 | 0.00 | 0.00 | 39.65 | 3.85 |
207 | 208 | 2.369394 | GCCATTAGGGTTCAAGTCCTG | 58.631 | 52.381 | 0.00 | 0.00 | 39.65 | 3.86 |
208 | 209 | 2.945890 | GCCATTAGGGTTCAAGTCCTGG | 60.946 | 54.545 | 0.00 | 0.00 | 39.65 | 4.45 |
209 | 210 | 2.308866 | CCATTAGGGTTCAAGTCCTGGT | 59.691 | 50.000 | 0.00 | 0.00 | 34.75 | 4.00 |
210 | 211 | 3.347216 | CATTAGGGTTCAAGTCCTGGTG | 58.653 | 50.000 | 0.00 | 0.00 | 34.75 | 4.17 |
211 | 212 | 0.690762 | TAGGGTTCAAGTCCTGGTGC | 59.309 | 55.000 | 0.00 | 0.00 | 34.75 | 5.01 |
212 | 213 | 1.062488 | AGGGTTCAAGTCCTGGTGCT | 61.062 | 55.000 | 0.00 | 0.00 | 31.11 | 4.40 |
213 | 214 | 0.606673 | GGGTTCAAGTCCTGGTGCTC | 60.607 | 60.000 | 0.00 | 0.00 | 0.00 | 4.26 |
214 | 215 | 0.951040 | GGTTCAAGTCCTGGTGCTCG | 60.951 | 60.000 | 0.00 | 0.00 | 0.00 | 5.03 |
215 | 216 | 1.301716 | TTCAAGTCCTGGTGCTCGC | 60.302 | 57.895 | 0.00 | 0.00 | 0.00 | 5.03 |
216 | 217 | 2.031012 | CAAGTCCTGGTGCTCGCA | 59.969 | 61.111 | 0.00 | 0.00 | 0.00 | 5.10 |
217 | 218 | 1.376424 | CAAGTCCTGGTGCTCGCAT | 60.376 | 57.895 | 0.00 | 0.00 | 0.00 | 4.73 |
218 | 219 | 0.957395 | CAAGTCCTGGTGCTCGCATT | 60.957 | 55.000 | 0.00 | 0.00 | 0.00 | 3.56 |
219 | 220 | 0.250901 | AAGTCCTGGTGCTCGCATTT | 60.251 | 50.000 | 0.00 | 0.00 | 0.00 | 2.32 |
220 | 221 | 0.613260 | AGTCCTGGTGCTCGCATTTA | 59.387 | 50.000 | 0.00 | 0.00 | 0.00 | 1.40 |
221 | 222 | 1.210478 | AGTCCTGGTGCTCGCATTTAT | 59.790 | 47.619 | 0.00 | 0.00 | 0.00 | 1.40 |
222 | 223 | 2.017049 | GTCCTGGTGCTCGCATTTATT | 58.983 | 47.619 | 0.00 | 0.00 | 0.00 | 1.40 |
223 | 224 | 2.032178 | GTCCTGGTGCTCGCATTTATTC | 59.968 | 50.000 | 0.00 | 0.00 | 0.00 | 1.75 |
224 | 225 | 2.092968 | TCCTGGTGCTCGCATTTATTCT | 60.093 | 45.455 | 0.00 | 0.00 | 0.00 | 2.40 |
225 | 226 | 2.684881 | CCTGGTGCTCGCATTTATTCTT | 59.315 | 45.455 | 0.00 | 0.00 | 0.00 | 2.52 |
226 | 227 | 3.488047 | CCTGGTGCTCGCATTTATTCTTG | 60.488 | 47.826 | 0.00 | 0.00 | 0.00 | 3.02 |
227 | 228 | 3.342719 | TGGTGCTCGCATTTATTCTTGA | 58.657 | 40.909 | 0.00 | 0.00 | 0.00 | 3.02 |
228 | 229 | 3.755905 | TGGTGCTCGCATTTATTCTTGAA | 59.244 | 39.130 | 0.00 | 0.00 | 0.00 | 2.69 |
229 | 230 | 4.398988 | TGGTGCTCGCATTTATTCTTGAAT | 59.601 | 37.500 | 0.00 | 1.35 | 0.00 | 2.57 |
230 | 231 | 4.736793 | GGTGCTCGCATTTATTCTTGAATG | 59.263 | 41.667 | 6.15 | 0.00 | 36.56 | 2.67 |
231 | 232 | 5.335127 | GTGCTCGCATTTATTCTTGAATGT | 58.665 | 37.500 | 6.15 | 0.00 | 36.03 | 2.71 |
232 | 233 | 5.228635 | GTGCTCGCATTTATTCTTGAATGTG | 59.771 | 40.000 | 6.15 | 3.87 | 42.29 | 3.21 |
233 | 234 | 5.106197 | TGCTCGCATTTATTCTTGAATGTGT | 60.106 | 36.000 | 6.15 | 0.00 | 41.86 | 3.72 |
234 | 235 | 5.801947 | GCTCGCATTTATTCTTGAATGTGTT | 59.198 | 36.000 | 6.15 | 0.00 | 41.86 | 3.32 |
235 | 236 | 6.308766 | GCTCGCATTTATTCTTGAATGTGTTT | 59.691 | 34.615 | 6.15 | 0.00 | 41.86 | 2.83 |
236 | 237 | 7.461938 | GCTCGCATTTATTCTTGAATGTGTTTC | 60.462 | 37.037 | 6.15 | 0.00 | 41.86 | 2.78 |
237 | 238 | 7.366513 | TCGCATTTATTCTTGAATGTGTTTCA | 58.633 | 30.769 | 6.15 | 0.00 | 41.86 | 2.69 |
238 | 239 | 7.538334 | TCGCATTTATTCTTGAATGTGTTTCAG | 59.462 | 33.333 | 6.15 | 0.00 | 44.90 | 3.02 |
239 | 240 | 7.201376 | CGCATTTATTCTTGAATGTGTTTCAGG | 60.201 | 37.037 | 6.15 | 0.00 | 44.90 | 3.86 |
240 | 241 | 7.814107 | GCATTTATTCTTGAATGTGTTTCAGGA | 59.186 | 33.333 | 6.15 | 0.00 | 45.60 | 3.86 |
241 | 242 | 9.865321 | CATTTATTCTTGAATGTGTTTCAGGAT | 57.135 | 29.630 | 6.15 | 0.00 | 46.25 | 3.24 |
244 | 245 | 9.912634 | TTATTCTTGAATGTGTTTCAGGATTTC | 57.087 | 29.630 | 6.15 | 0.00 | 46.25 | 2.17 |
245 | 246 | 6.331369 | TCTTGAATGTGTTTCAGGATTTCC | 57.669 | 37.500 | 0.00 | 0.00 | 43.30 | 3.13 |
246 | 247 | 4.764679 | TGAATGTGTTTCAGGATTTCCG | 57.235 | 40.909 | 0.00 | 0.00 | 39.44 | 4.30 |
247 | 248 | 3.505680 | TGAATGTGTTTCAGGATTTCCGG | 59.494 | 43.478 | 0.00 | 0.00 | 39.44 | 5.14 |
248 | 249 | 1.243902 | TGTGTTTCAGGATTTCCGGC | 58.756 | 50.000 | 0.00 | 0.00 | 42.08 | 6.13 |
249 | 250 | 0.168128 | GTGTTTCAGGATTTCCGGCG | 59.832 | 55.000 | 0.00 | 0.00 | 42.08 | 6.46 |
250 | 251 | 0.035598 | TGTTTCAGGATTTCCGGCGA | 59.964 | 50.000 | 9.30 | 0.00 | 42.08 | 5.54 |
251 | 252 | 1.339631 | TGTTTCAGGATTTCCGGCGAT | 60.340 | 47.619 | 9.30 | 0.00 | 42.08 | 4.58 |
252 | 253 | 1.064060 | GTTTCAGGATTTCCGGCGATG | 59.936 | 52.381 | 9.30 | 0.00 | 42.08 | 3.84 |
253 | 254 | 1.095228 | TTCAGGATTTCCGGCGATGC | 61.095 | 55.000 | 9.30 | 0.00 | 42.08 | 3.91 |
254 | 255 | 2.588877 | AGGATTTCCGGCGATGCG | 60.589 | 61.111 | 9.30 | 0.00 | 42.08 | 4.73 |
265 | 266 | 2.711311 | CGATGCGCATTCAGTGGG | 59.289 | 61.111 | 26.12 | 4.47 | 43.21 | 4.61 |
266 | 267 | 1.815003 | CGATGCGCATTCAGTGGGA | 60.815 | 57.895 | 26.12 | 0.00 | 43.02 | 4.37 |
267 | 268 | 1.769098 | CGATGCGCATTCAGTGGGAG | 61.769 | 60.000 | 26.12 | 4.12 | 43.02 | 4.30 |
268 | 269 | 1.442526 | GATGCGCATTCAGTGGGAGG | 61.443 | 60.000 | 26.12 | 0.00 | 43.02 | 4.30 |
269 | 270 | 1.913951 | ATGCGCATTCAGTGGGAGGA | 61.914 | 55.000 | 19.28 | 0.00 | 43.02 | 3.71 |
270 | 271 | 1.817099 | GCGCATTCAGTGGGAGGAG | 60.817 | 63.158 | 0.30 | 0.00 | 43.02 | 3.69 |
271 | 272 | 1.900351 | CGCATTCAGTGGGAGGAGA | 59.100 | 57.895 | 0.00 | 0.00 | 43.02 | 3.71 |
272 | 273 | 0.460987 | CGCATTCAGTGGGAGGAGAC | 60.461 | 60.000 | 0.00 | 0.00 | 43.02 | 3.36 |
273 | 274 | 0.460987 | GCATTCAGTGGGAGGAGACG | 60.461 | 60.000 | 0.00 | 0.00 | 0.00 | 4.18 |
274 | 275 | 0.898320 | CATTCAGTGGGAGGAGACGT | 59.102 | 55.000 | 0.00 | 0.00 | 0.00 | 4.34 |
275 | 276 | 1.276421 | CATTCAGTGGGAGGAGACGTT | 59.724 | 52.381 | 0.00 | 0.00 | 0.00 | 3.99 |
276 | 277 | 0.966920 | TTCAGTGGGAGGAGACGTTC | 59.033 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
299 | 300 | 1.654105 | GTTGACAACGAGATGCCTACG | 59.346 | 52.381 | 1.86 | 0.00 | 0.00 | 3.51 |
300 | 301 | 0.172578 | TGACAACGAGATGCCTACGG | 59.827 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
301 | 302 | 0.172803 | GACAACGAGATGCCTACGGT | 59.827 | 55.000 | 0.00 | 0.00 | 0.00 | 4.83 |
302 | 303 | 2.665777 | CAACGAGATGCCTACGGTG | 58.334 | 57.895 | 0.00 | 0.00 | 38.31 | 4.94 |
303 | 304 | 0.172578 | CAACGAGATGCCTACGGTGA | 59.827 | 55.000 | 0.00 | 0.00 | 45.69 | 4.02 |
304 | 305 | 0.172803 | AACGAGATGCCTACGGTGAC | 59.827 | 55.000 | 0.00 | 0.00 | 0.00 | 3.67 |
305 | 306 | 0.680280 | ACGAGATGCCTACGGTGACT | 60.680 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
306 | 307 | 0.456221 | CGAGATGCCTACGGTGACTT | 59.544 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
307 | 308 | 1.534175 | CGAGATGCCTACGGTGACTTC | 60.534 | 57.143 | 0.00 | 0.00 | 0.00 | 3.01 |
308 | 309 | 0.456221 | AGATGCCTACGGTGACTTCG | 59.544 | 55.000 | 0.00 | 0.00 | 0.00 | 3.79 |
309 | 310 | 0.172803 | GATGCCTACGGTGACTTCGT | 59.827 | 55.000 | 0.00 | 0.00 | 43.64 | 3.85 |
310 | 311 | 1.402968 | GATGCCTACGGTGACTTCGTA | 59.597 | 52.381 | 0.00 | 0.00 | 41.38 | 3.43 |
311 | 312 | 1.246649 | TGCCTACGGTGACTTCGTAA | 58.753 | 50.000 | 0.00 | 0.00 | 41.62 | 3.18 |
312 | 313 | 1.612950 | TGCCTACGGTGACTTCGTAAA | 59.387 | 47.619 | 0.00 | 0.00 | 41.62 | 2.01 |
313 | 314 | 2.231964 | TGCCTACGGTGACTTCGTAAAT | 59.768 | 45.455 | 0.00 | 0.00 | 41.62 | 1.40 |
314 | 315 | 3.256558 | GCCTACGGTGACTTCGTAAATT | 58.743 | 45.455 | 0.00 | 0.00 | 41.62 | 1.82 |
315 | 316 | 3.681417 | GCCTACGGTGACTTCGTAAATTT | 59.319 | 43.478 | 0.00 | 0.00 | 41.62 | 1.82 |
316 | 317 | 4.201656 | GCCTACGGTGACTTCGTAAATTTC | 60.202 | 45.833 | 0.00 | 0.00 | 41.62 | 2.17 |
317 | 318 | 4.925054 | CCTACGGTGACTTCGTAAATTTCA | 59.075 | 41.667 | 0.00 | 0.00 | 41.62 | 2.69 |
318 | 319 | 5.406175 | CCTACGGTGACTTCGTAAATTTCAA | 59.594 | 40.000 | 0.00 | 0.00 | 41.62 | 2.69 |
319 | 320 | 5.338614 | ACGGTGACTTCGTAAATTTCAAG | 57.661 | 39.130 | 0.00 | 0.00 | 39.22 | 3.02 |
320 | 321 | 5.051816 | ACGGTGACTTCGTAAATTTCAAGA | 58.948 | 37.500 | 0.00 | 0.00 | 39.22 | 3.02 |
321 | 322 | 5.699458 | ACGGTGACTTCGTAAATTTCAAGAT | 59.301 | 36.000 | 0.00 | 0.00 | 39.22 | 2.40 |
322 | 323 | 6.015504 | CGGTGACTTCGTAAATTTCAAGATG | 58.984 | 40.000 | 0.00 | 0.00 | 0.00 | 2.90 |
323 | 324 | 6.128661 | CGGTGACTTCGTAAATTTCAAGATGA | 60.129 | 38.462 | 0.00 | 0.00 | 0.00 | 2.92 |
324 | 325 | 7.413000 | CGGTGACTTCGTAAATTTCAAGATGAT | 60.413 | 37.037 | 0.00 | 0.00 | 0.00 | 2.45 |
325 | 326 | 8.879759 | GGTGACTTCGTAAATTTCAAGATGATA | 58.120 | 33.333 | 0.00 | 0.00 | 0.00 | 2.15 |
330 | 331 | 9.573102 | CTTCGTAAATTTCAAGATGATATGTCG | 57.427 | 33.333 | 0.00 | 0.00 | 0.00 | 4.35 |
331 | 332 | 8.072238 | TCGTAAATTTCAAGATGATATGTCGG | 57.928 | 34.615 | 0.00 | 0.00 | 0.00 | 4.79 |
332 | 333 | 6.792250 | CGTAAATTTCAAGATGATATGTCGGC | 59.208 | 38.462 | 0.00 | 0.00 | 0.00 | 5.54 |
333 | 334 | 6.949352 | AAATTTCAAGATGATATGTCGGCT | 57.051 | 33.333 | 0.00 | 0.00 | 0.00 | 5.52 |
334 | 335 | 6.551385 | AATTTCAAGATGATATGTCGGCTC | 57.449 | 37.500 | 0.00 | 0.00 | 0.00 | 4.70 |
335 | 336 | 4.670896 | TTCAAGATGATATGTCGGCTCA | 57.329 | 40.909 | 0.00 | 0.00 | 0.00 | 4.26 |
336 | 337 | 4.248691 | TCAAGATGATATGTCGGCTCAG | 57.751 | 45.455 | 0.00 | 0.00 | 0.00 | 3.35 |
337 | 338 | 3.638627 | TCAAGATGATATGTCGGCTCAGT | 59.361 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
338 | 339 | 3.932545 | AGATGATATGTCGGCTCAGTC | 57.067 | 47.619 | 0.00 | 0.00 | 0.00 | 3.51 |
339 | 340 | 3.495331 | AGATGATATGTCGGCTCAGTCT | 58.505 | 45.455 | 0.00 | 0.00 | 0.00 | 3.24 |
340 | 341 | 3.894427 | AGATGATATGTCGGCTCAGTCTT | 59.106 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
341 | 342 | 4.343526 | AGATGATATGTCGGCTCAGTCTTT | 59.656 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
342 | 343 | 4.046938 | TGATATGTCGGCTCAGTCTTTC | 57.953 | 45.455 | 0.00 | 0.00 | 0.00 | 2.62 |
343 | 344 | 2.561733 | TATGTCGGCTCAGTCTTTCG | 57.438 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
344 | 345 | 0.108615 | ATGTCGGCTCAGTCTTTCGG | 60.109 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
345 | 346 | 1.176619 | TGTCGGCTCAGTCTTTCGGA | 61.177 | 55.000 | 0.00 | 0.00 | 0.00 | 4.55 |
346 | 347 | 0.456995 | GTCGGCTCAGTCTTTCGGAG | 60.457 | 60.000 | 0.00 | 0.00 | 40.44 | 4.63 |
347 | 348 | 1.153745 | CGGCTCAGTCTTTCGGAGG | 60.154 | 63.158 | 0.00 | 0.00 | 38.48 | 4.30 |
348 | 349 | 1.878656 | CGGCTCAGTCTTTCGGAGGT | 61.879 | 60.000 | 0.00 | 0.00 | 38.48 | 3.85 |
349 | 350 | 1.183549 | GGCTCAGTCTTTCGGAGGTA | 58.816 | 55.000 | 0.00 | 0.00 | 38.48 | 3.08 |
350 | 351 | 1.135053 | GGCTCAGTCTTTCGGAGGTAC | 60.135 | 57.143 | 0.00 | 0.00 | 38.48 | 3.34 |
352 | 353 | 2.231721 | GCTCAGTCTTTCGGAGGTACTT | 59.768 | 50.000 | 0.00 | 0.00 | 41.55 | 2.24 |
353 | 354 | 3.442977 | GCTCAGTCTTTCGGAGGTACTTA | 59.557 | 47.826 | 0.00 | 0.00 | 41.55 | 2.24 |
354 | 355 | 4.098196 | GCTCAGTCTTTCGGAGGTACTTAT | 59.902 | 45.833 | 0.00 | 0.00 | 41.55 | 1.73 |
355 | 356 | 5.298777 | GCTCAGTCTTTCGGAGGTACTTATA | 59.701 | 44.000 | 0.00 | 0.00 | 41.55 | 0.98 |
356 | 357 | 6.513720 | GCTCAGTCTTTCGGAGGTACTTATAG | 60.514 | 46.154 | 0.00 | 0.00 | 41.55 | 1.31 |
357 | 358 | 5.826737 | TCAGTCTTTCGGAGGTACTTATAGG | 59.173 | 44.000 | 0.00 | 0.00 | 41.55 | 2.57 |
358 | 359 | 5.009811 | CAGTCTTTCGGAGGTACTTATAGGG | 59.990 | 48.000 | 0.00 | 0.00 | 41.55 | 3.53 |
359 | 360 | 4.280425 | GTCTTTCGGAGGTACTTATAGGGG | 59.720 | 50.000 | 0.00 | 0.00 | 41.55 | 4.79 |
360 | 361 | 3.979501 | TTCGGAGGTACTTATAGGGGT | 57.020 | 47.619 | 0.00 | 0.00 | 41.55 | 4.95 |
361 | 362 | 5.134339 | TCTTTCGGAGGTACTTATAGGGGTA | 59.866 | 44.000 | 0.00 | 0.00 | 41.55 | 3.69 |
362 | 363 | 4.647564 | TCGGAGGTACTTATAGGGGTAG | 57.352 | 50.000 | 0.00 | 0.00 | 41.55 | 3.18 |
363 | 364 | 3.331889 | TCGGAGGTACTTATAGGGGTAGG | 59.668 | 52.174 | 0.00 | 0.00 | 41.55 | 3.18 |
364 | 365 | 3.075134 | CGGAGGTACTTATAGGGGTAGGT | 59.925 | 52.174 | 0.00 | 0.00 | 41.55 | 3.08 |
365 | 366 | 4.414677 | GGAGGTACTTATAGGGGTAGGTG | 58.585 | 52.174 | 0.00 | 0.00 | 41.55 | 4.00 |
366 | 367 | 4.140829 | GGAGGTACTTATAGGGGTAGGTGT | 60.141 | 50.000 | 0.00 | 0.00 | 41.55 | 4.16 |
367 | 368 | 4.812653 | AGGTACTTATAGGGGTAGGTGTG | 58.187 | 47.826 | 0.00 | 0.00 | 27.25 | 3.82 |
368 | 369 | 3.323115 | GGTACTTATAGGGGTAGGTGTGC | 59.677 | 52.174 | 0.00 | 0.00 | 0.00 | 4.57 |
369 | 370 | 2.037144 | ACTTATAGGGGTAGGTGTGCG | 58.963 | 52.381 | 0.00 | 0.00 | 0.00 | 5.34 |
370 | 371 | 2.037144 | CTTATAGGGGTAGGTGTGCGT | 58.963 | 52.381 | 0.00 | 0.00 | 0.00 | 5.24 |
371 | 372 | 1.405872 | TATAGGGGTAGGTGTGCGTG | 58.594 | 55.000 | 0.00 | 0.00 | 0.00 | 5.34 |
372 | 373 | 0.616679 | ATAGGGGTAGGTGTGCGTGT | 60.617 | 55.000 | 0.00 | 0.00 | 0.00 | 4.49 |
373 | 374 | 1.537814 | TAGGGGTAGGTGTGCGTGTG | 61.538 | 60.000 | 0.00 | 0.00 | 0.00 | 3.82 |
374 | 375 | 2.424302 | GGGTAGGTGTGCGTGTGT | 59.576 | 61.111 | 0.00 | 0.00 | 0.00 | 3.72 |
375 | 376 | 1.959226 | GGGTAGGTGTGCGTGTGTG | 60.959 | 63.158 | 0.00 | 0.00 | 0.00 | 3.82 |
376 | 377 | 2.604174 | GGTAGGTGTGCGTGTGTGC | 61.604 | 63.158 | 0.00 | 0.00 | 0.00 | 4.57 |
377 | 378 | 2.660224 | TAGGTGTGCGTGTGTGCG | 60.660 | 61.111 | 0.00 | 0.00 | 37.81 | 5.34 |
378 | 379 | 3.433540 | TAGGTGTGCGTGTGTGCGT | 62.434 | 57.895 | 0.00 | 0.00 | 37.81 | 5.24 |
379 | 380 | 2.909614 | TAGGTGTGCGTGTGTGCGTT | 62.910 | 55.000 | 0.00 | 0.00 | 37.81 | 4.84 |
380 | 381 | 2.350760 | GTGTGCGTGTGTGCGTTC | 60.351 | 61.111 | 0.00 | 0.00 | 37.81 | 3.95 |
381 | 382 | 2.815647 | TGTGCGTGTGTGCGTTCA | 60.816 | 55.556 | 0.00 | 0.00 | 37.81 | 3.18 |
382 | 383 | 2.176926 | TGTGCGTGTGTGCGTTCAT | 61.177 | 52.632 | 0.00 | 0.00 | 37.81 | 2.57 |
383 | 384 | 0.876342 | TGTGCGTGTGTGCGTTCATA | 60.876 | 50.000 | 0.00 | 0.00 | 37.81 | 2.15 |
384 | 385 | 0.179250 | GTGCGTGTGTGCGTTCATAG | 60.179 | 55.000 | 0.00 | 0.00 | 37.81 | 2.23 |
385 | 386 | 1.288419 | TGCGTGTGTGCGTTCATAGG | 61.288 | 55.000 | 0.00 | 0.00 | 37.81 | 2.57 |
386 | 387 | 1.966493 | GCGTGTGTGCGTTCATAGGG | 61.966 | 60.000 | 0.00 | 0.00 | 0.00 | 3.53 |
387 | 388 | 1.358725 | CGTGTGTGCGTTCATAGGGG | 61.359 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
388 | 389 | 0.321298 | GTGTGTGCGTTCATAGGGGT | 60.321 | 55.000 | 0.00 | 0.00 | 0.00 | 4.95 |
389 | 390 | 0.321210 | TGTGTGCGTTCATAGGGGTG | 60.321 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
390 | 391 | 0.036765 | GTGTGCGTTCATAGGGGTGA | 60.037 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
391 | 392 | 0.249120 | TGTGCGTTCATAGGGGTGAG | 59.751 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
392 | 393 | 0.249398 | GTGCGTTCATAGGGGTGAGT | 59.751 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
393 | 394 | 0.249120 | TGCGTTCATAGGGGTGAGTG | 59.751 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
394 | 395 | 0.249398 | GCGTTCATAGGGGTGAGTGT | 59.751 | 55.000 | 0.00 | 0.00 | 0.00 | 3.55 |
395 | 396 | 1.479323 | GCGTTCATAGGGGTGAGTGTA | 59.521 | 52.381 | 0.00 | 0.00 | 0.00 | 2.90 |
396 | 397 | 2.102588 | GCGTTCATAGGGGTGAGTGTAT | 59.897 | 50.000 | 0.00 | 0.00 | 0.00 | 2.29 |
397 | 398 | 3.717707 | CGTTCATAGGGGTGAGTGTATG | 58.282 | 50.000 | 0.00 | 0.00 | 0.00 | 2.39 |
398 | 399 | 3.467803 | GTTCATAGGGGTGAGTGTATGC | 58.532 | 50.000 | 0.00 | 0.00 | 0.00 | 3.14 |
399 | 400 | 1.686587 | TCATAGGGGTGAGTGTATGCG | 59.313 | 52.381 | 0.00 | 0.00 | 0.00 | 4.73 |
400 | 401 | 0.393077 | ATAGGGGTGAGTGTATGCGC | 59.607 | 55.000 | 0.00 | 0.00 | 0.00 | 6.09 |
401 | 402 | 2.011741 | TAGGGGTGAGTGTATGCGCG | 62.012 | 60.000 | 0.00 | 0.00 | 0.00 | 6.86 |
402 | 403 | 2.125673 | GGGTGAGTGTATGCGCGT | 60.126 | 61.111 | 8.43 | 7.55 | 0.00 | 6.01 |
403 | 404 | 2.452813 | GGGTGAGTGTATGCGCGTG | 61.453 | 63.158 | 13.61 | 0.00 | 0.00 | 5.34 |
404 | 405 | 1.736645 | GGTGAGTGTATGCGCGTGT | 60.737 | 57.895 | 13.61 | 0.00 | 0.00 | 4.49 |
405 | 406 | 0.457166 | GGTGAGTGTATGCGCGTGTA | 60.457 | 55.000 | 13.61 | 0.00 | 0.00 | 2.90 |
406 | 407 | 1.556564 | GTGAGTGTATGCGCGTGTAT | 58.443 | 50.000 | 13.61 | 4.63 | 0.00 | 2.29 |
407 | 408 | 2.542205 | GGTGAGTGTATGCGCGTGTATA | 60.542 | 50.000 | 13.61 | 2.40 | 0.00 | 1.47 |
408 | 409 | 3.305964 | GTGAGTGTATGCGCGTGTATAT | 58.694 | 45.455 | 13.61 | 0.00 | 0.00 | 0.86 |
409 | 410 | 3.734231 | GTGAGTGTATGCGCGTGTATATT | 59.266 | 43.478 | 13.61 | 0.00 | 0.00 | 1.28 |
410 | 411 | 4.913345 | GTGAGTGTATGCGCGTGTATATTA | 59.087 | 41.667 | 13.61 | 0.62 | 0.00 | 0.98 |
411 | 412 | 5.059343 | GTGAGTGTATGCGCGTGTATATTAG | 59.941 | 44.000 | 13.61 | 0.00 | 0.00 | 1.73 |
412 | 413 | 3.918591 | AGTGTATGCGCGTGTATATTAGC | 59.081 | 43.478 | 13.61 | 0.00 | 0.00 | 3.09 |
417 | 418 | 2.471072 | CGCGTGTATATTAGCGCTTG | 57.529 | 50.000 | 18.68 | 0.00 | 46.56 | 4.01 |
418 | 419 | 1.460267 | CGCGTGTATATTAGCGCTTGC | 60.460 | 52.381 | 18.68 | 0.43 | 46.56 | 4.01 |
419 | 420 | 1.460267 | GCGTGTATATTAGCGCTTGCG | 60.460 | 52.381 | 18.68 | 10.90 | 45.48 | 4.85 |
420 | 421 | 1.784856 | CGTGTATATTAGCGCTTGCGT | 59.215 | 47.619 | 18.68 | 2.36 | 45.69 | 5.24 |
421 | 422 | 2.160143 | CGTGTATATTAGCGCTTGCGTC | 60.160 | 50.000 | 18.68 | 8.80 | 45.69 | 5.19 |
422 | 423 | 2.155155 | GTGTATATTAGCGCTTGCGTCC | 59.845 | 50.000 | 18.68 | 0.45 | 45.69 | 4.79 |
423 | 424 | 1.385743 | GTATATTAGCGCTTGCGTCCG | 59.614 | 52.381 | 18.68 | 0.00 | 45.69 | 4.79 |
424 | 425 | 0.249322 | ATATTAGCGCTTGCGTCCGT | 60.249 | 50.000 | 18.68 | 0.00 | 45.69 | 4.69 |
425 | 426 | 0.381445 | TATTAGCGCTTGCGTCCGTA | 59.619 | 50.000 | 18.68 | 0.00 | 45.69 | 4.02 |
426 | 427 | 0.249322 | ATTAGCGCTTGCGTCCGTAT | 60.249 | 50.000 | 18.68 | 0.00 | 45.69 | 3.06 |
427 | 428 | 0.458889 | TTAGCGCTTGCGTCCGTATT | 60.459 | 50.000 | 18.68 | 0.00 | 45.69 | 1.89 |
428 | 429 | 0.381445 | TAGCGCTTGCGTCCGTATTA | 59.619 | 50.000 | 18.68 | 0.00 | 45.69 | 0.98 |
429 | 430 | 1.143969 | AGCGCTTGCGTCCGTATTAC | 61.144 | 55.000 | 16.38 | 0.00 | 45.69 | 1.89 |
430 | 431 | 1.551779 | CGCTTGCGTCCGTATTACG | 59.448 | 57.895 | 9.26 | 9.26 | 43.12 | 3.18 |
431 | 432 | 1.135699 | CGCTTGCGTCCGTATTACGT | 61.136 | 55.000 | 14.62 | 0.00 | 40.58 | 3.57 |
432 | 433 | 0.994263 | GCTTGCGTCCGTATTACGTT | 59.006 | 50.000 | 14.62 | 0.00 | 40.58 | 3.99 |
433 | 434 | 2.184448 | GCTTGCGTCCGTATTACGTTA | 58.816 | 47.619 | 14.62 | 0.44 | 40.58 | 3.18 |
434 | 435 | 2.598192 | GCTTGCGTCCGTATTACGTTAA | 59.402 | 45.455 | 14.62 | 0.00 | 40.58 | 2.01 |
435 | 436 | 3.060628 | GCTTGCGTCCGTATTACGTTAAA | 59.939 | 43.478 | 14.62 | 2.29 | 40.58 | 1.52 |
436 | 437 | 4.434067 | GCTTGCGTCCGTATTACGTTAAAA | 60.434 | 41.667 | 14.62 | 2.89 | 40.58 | 1.52 |
437 | 438 | 5.582439 | TTGCGTCCGTATTACGTTAAAAA | 57.418 | 34.783 | 14.62 | 2.02 | 40.58 | 1.94 |
519 | 520 | 0.817634 | TGTCAAACTTCCACCTGCCG | 60.818 | 55.000 | 0.00 | 0.00 | 0.00 | 5.69 |
525 | 526 | 1.221840 | CTTCCACCTGCCGCACTAT | 59.778 | 57.895 | 0.00 | 0.00 | 0.00 | 2.12 |
532 | 533 | 3.880490 | CCACCTGCCGCACTATAAAATTA | 59.120 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
533 | 534 | 4.518970 | CCACCTGCCGCACTATAAAATTAT | 59.481 | 41.667 | 0.00 | 0.00 | 0.00 | 1.28 |
535 | 536 | 6.142817 | CACCTGCCGCACTATAAAATTATTC | 58.857 | 40.000 | 0.00 | 0.00 | 0.00 | 1.75 |
541 | 542 | 6.913673 | GCCGCACTATAAAATTATTCGGAAAA | 59.086 | 34.615 | 14.30 | 0.00 | 36.77 | 2.29 |
623 | 634 | 2.125512 | AATGACGAGCGGCAGACC | 60.126 | 61.111 | 4.24 | 0.00 | 36.12 | 3.85 |
702 | 713 | 2.107031 | CCATCTCCATCTACATTGCCCA | 59.893 | 50.000 | 0.00 | 0.00 | 0.00 | 5.36 |
722 | 733 | 0.971386 | TACGGACCAAACTCCACCTC | 59.029 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
733 | 750 | 5.069781 | CCAAACTCCACCTCCATTAAACAAA | 59.930 | 40.000 | 0.00 | 0.00 | 0.00 | 2.83 |
734 | 751 | 6.407525 | CCAAACTCCACCTCCATTAAACAAAA | 60.408 | 38.462 | 0.00 | 0.00 | 0.00 | 2.44 |
735 | 752 | 5.784578 | ACTCCACCTCCATTAAACAAAAC | 57.215 | 39.130 | 0.00 | 0.00 | 0.00 | 2.43 |
883 | 911 | 1.980765 | TGCTCTCACTCCCTTTGATGT | 59.019 | 47.619 | 0.00 | 0.00 | 0.00 | 3.06 |
902 | 930 | 0.771127 | TCTTCTTCCCCCACCACAAG | 59.229 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
1335 | 1396 | 4.872485 | GTCTCCGCGCTCGACTCG | 62.872 | 72.222 | 5.56 | 0.00 | 38.10 | 4.18 |
1638 | 1699 | 2.362503 | ACACCCCTCGAGATCGCA | 60.363 | 61.111 | 15.71 | 0.00 | 39.60 | 5.10 |
1774 | 1835 | 3.328288 | CTTCTTGGAAAGCCCGCGC | 62.328 | 63.158 | 0.00 | 0.00 | 45.70 | 6.86 |
1800 | 1861 | 4.465446 | CCCGGCTCCTCCTCCTCA | 62.465 | 72.222 | 0.00 | 0.00 | 0.00 | 3.86 |
1824 | 1888 | 0.389948 | CCTTCTCCGGTTCCTTCACG | 60.390 | 60.000 | 0.00 | 0.00 | 0.00 | 4.35 |
2562 | 6138 | 3.785859 | GGGAGCATGGACAGGCGA | 61.786 | 66.667 | 3.14 | 0.00 | 43.74 | 5.54 |
2580 | 6156 | 4.089757 | CGGAGGGGGAGGAAGGGA | 62.090 | 72.222 | 0.00 | 0.00 | 0.00 | 4.20 |
2586 | 6162 | 1.925972 | GGGGAGGAAGGGAAGCAGT | 60.926 | 63.158 | 0.00 | 0.00 | 0.00 | 4.40 |
2830 | 6433 | 3.963665 | TGTTCAAAGGTTTCATTGCTCG | 58.036 | 40.909 | 0.00 | 0.00 | 0.00 | 5.03 |
2854 | 6457 | 5.051039 | GCATGTTGCAATAAGATGATGCTTG | 60.051 | 40.000 | 0.59 | 0.00 | 44.26 | 4.01 |
2869 | 6472 | 8.531982 | AGATGATGCTTGTCTTTAGTTGTACTA | 58.468 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
2915 | 6519 | 6.646653 | GGTTTCTCTTTGGATCATGTTTTTCC | 59.353 | 38.462 | 0.00 | 0.00 | 0.00 | 3.13 |
3039 | 6884 | 6.183360 | ACCTCAAGATCGATTTAGGTACTCAC | 60.183 | 42.308 | 15.95 | 0.00 | 41.75 | 3.51 |
3235 | 7081 | 7.573710 | TGGTGTGATAGCATTCTTACCTAATT | 58.426 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
3522 | 7372 | 7.020827 | AGGATTTCCTCTTGAGTTGTCATAA | 57.979 | 36.000 | 0.00 | 0.00 | 44.77 | 1.90 |
3533 | 7383 | 8.097038 | TCTTGAGTTGTCATAAAGCTAGATGTT | 58.903 | 33.333 | 0.00 | 0.00 | 30.85 | 2.71 |
3610 | 7860 | 1.887242 | TGCAGAAGACGTGGTGTGC | 60.887 | 57.895 | 9.55 | 9.55 | 0.00 | 4.57 |
3648 | 7898 | 5.480205 | AGAGTAGTTTCTTTTTAGCCGAGG | 58.520 | 41.667 | 0.00 | 0.00 | 0.00 | 4.63 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
9 | 10 | 6.975196 | AAAATAATTTGGCCAAGGCTTTTT | 57.025 | 29.167 | 19.48 | 18.60 | 41.60 | 1.94 |
10 | 11 | 6.975196 | AAAAATAATTTGGCCAAGGCTTTT | 57.025 | 29.167 | 19.48 | 18.15 | 41.60 | 2.27 |
11 | 12 | 6.148645 | CGTAAAAATAATTTGGCCAAGGCTTT | 59.851 | 34.615 | 19.48 | 13.68 | 41.60 | 3.51 |
12 | 13 | 5.641636 | CGTAAAAATAATTTGGCCAAGGCTT | 59.358 | 36.000 | 19.48 | 15.41 | 41.60 | 4.35 |
13 | 14 | 5.175127 | CGTAAAAATAATTTGGCCAAGGCT | 58.825 | 37.500 | 19.48 | 9.63 | 41.60 | 4.58 |
14 | 15 | 4.201773 | GCGTAAAAATAATTTGGCCAAGGC | 60.202 | 41.667 | 19.48 | 6.97 | 41.06 | 4.35 |
15 | 16 | 4.032331 | CGCGTAAAAATAATTTGGCCAAGG | 59.968 | 41.667 | 19.48 | 0.00 | 0.00 | 3.61 |
16 | 17 | 4.859798 | TCGCGTAAAAATAATTTGGCCAAG | 59.140 | 37.500 | 19.48 | 3.33 | 0.00 | 3.61 |
17 | 18 | 4.621886 | GTCGCGTAAAAATAATTTGGCCAA | 59.378 | 37.500 | 16.05 | 16.05 | 0.00 | 4.52 |
18 | 19 | 4.082679 | AGTCGCGTAAAAATAATTTGGCCA | 60.083 | 37.500 | 0.00 | 0.00 | 0.00 | 5.36 |
19 | 20 | 4.417506 | AGTCGCGTAAAAATAATTTGGCC | 58.582 | 39.130 | 5.77 | 0.00 | 0.00 | 5.36 |
20 | 21 | 5.343860 | ACAAGTCGCGTAAAAATAATTTGGC | 59.656 | 36.000 | 5.77 | 0.00 | 0.00 | 4.52 |
21 | 22 | 6.033091 | GGACAAGTCGCGTAAAAATAATTTGG | 59.967 | 38.462 | 5.77 | 0.00 | 0.00 | 3.28 |
22 | 23 | 6.033091 | GGGACAAGTCGCGTAAAAATAATTTG | 59.967 | 38.462 | 5.77 | 0.00 | 32.91 | 2.32 |
23 | 24 | 6.072342 | AGGGACAAGTCGCGTAAAAATAATTT | 60.072 | 34.615 | 5.77 | 0.00 | 45.79 | 1.82 |
24 | 25 | 5.413523 | AGGGACAAGTCGCGTAAAAATAATT | 59.586 | 36.000 | 5.77 | 0.00 | 45.79 | 1.40 |
25 | 26 | 4.939439 | AGGGACAAGTCGCGTAAAAATAAT | 59.061 | 37.500 | 5.77 | 0.00 | 45.79 | 1.28 |
26 | 27 | 4.317488 | AGGGACAAGTCGCGTAAAAATAA | 58.683 | 39.130 | 5.77 | 0.00 | 45.79 | 1.40 |
27 | 28 | 3.929094 | AGGGACAAGTCGCGTAAAAATA | 58.071 | 40.909 | 5.77 | 0.00 | 45.79 | 1.40 |
28 | 29 | 2.774687 | AGGGACAAGTCGCGTAAAAAT | 58.225 | 42.857 | 5.77 | 0.00 | 45.79 | 1.82 |
29 | 30 | 2.243602 | AGGGACAAGTCGCGTAAAAA | 57.756 | 45.000 | 5.77 | 0.00 | 45.79 | 1.94 |
30 | 31 | 2.297033 | ACTAGGGACAAGTCGCGTAAAA | 59.703 | 45.455 | 5.77 | 0.00 | 45.79 | 1.52 |
31 | 32 | 1.888512 | ACTAGGGACAAGTCGCGTAAA | 59.111 | 47.619 | 5.77 | 0.00 | 45.79 | 2.01 |
32 | 33 | 1.470098 | GACTAGGGACAAGTCGCGTAA | 59.530 | 52.381 | 5.77 | 1.88 | 45.79 | 3.18 |
33 | 34 | 1.089920 | GACTAGGGACAAGTCGCGTA | 58.910 | 55.000 | 5.77 | 4.61 | 45.79 | 4.42 |
34 | 35 | 1.881602 | GACTAGGGACAAGTCGCGT | 59.118 | 57.895 | 5.77 | 4.88 | 45.79 | 6.01 |
35 | 36 | 4.787999 | GACTAGGGACAAGTCGCG | 57.212 | 61.111 | 0.00 | 0.00 | 45.79 | 5.87 |
38 | 39 | 0.816373 | GGACCGACTAGGGACAAGTC | 59.184 | 60.000 | 0.00 | 0.00 | 46.96 | 3.01 |
39 | 40 | 0.614134 | GGGACCGACTAGGGACAAGT | 60.614 | 60.000 | 0.00 | 0.00 | 46.96 | 3.16 |
40 | 41 | 0.613853 | TGGGACCGACTAGGGACAAG | 60.614 | 60.000 | 0.00 | 0.00 | 46.96 | 3.16 |
41 | 42 | 0.178926 | TTGGGACCGACTAGGGACAA | 60.179 | 55.000 | 0.00 | 0.00 | 46.96 | 3.18 |
42 | 43 | 0.042131 | ATTGGGACCGACTAGGGACA | 59.958 | 55.000 | 0.00 | 0.00 | 46.96 | 4.02 |
43 | 44 | 0.464452 | CATTGGGACCGACTAGGGAC | 59.536 | 60.000 | 0.00 | 0.00 | 46.96 | 4.46 |
44 | 45 | 0.689745 | CCATTGGGACCGACTAGGGA | 60.690 | 60.000 | 0.00 | 0.00 | 46.96 | 4.20 |
45 | 46 | 0.981277 | ACCATTGGGACCGACTAGGG | 60.981 | 60.000 | 7.78 | 0.00 | 40.53 | 3.53 |
46 | 47 | 0.909623 | AACCATTGGGACCGACTAGG | 59.090 | 55.000 | 7.78 | 0.00 | 41.52 | 3.02 |
47 | 48 | 2.781681 | AAACCATTGGGACCGACTAG | 57.218 | 50.000 | 7.78 | 0.00 | 38.05 | 2.57 |
48 | 49 | 3.175594 | AGTAAACCATTGGGACCGACTA | 58.824 | 45.455 | 7.78 | 0.00 | 38.05 | 2.59 |
49 | 50 | 1.982958 | AGTAAACCATTGGGACCGACT | 59.017 | 47.619 | 7.78 | 0.34 | 38.05 | 4.18 |
50 | 51 | 2.484742 | AGTAAACCATTGGGACCGAC | 57.515 | 50.000 | 7.78 | 0.00 | 38.05 | 4.79 |
51 | 52 | 2.785562 | CAAGTAAACCATTGGGACCGA | 58.214 | 47.619 | 7.78 | 0.00 | 38.05 | 4.69 |
52 | 53 | 1.201414 | GCAAGTAAACCATTGGGACCG | 59.799 | 52.381 | 7.78 | 0.00 | 38.05 | 4.79 |
53 | 54 | 1.548719 | GGCAAGTAAACCATTGGGACC | 59.451 | 52.381 | 7.78 | 0.00 | 38.05 | 4.46 |
54 | 55 | 2.525368 | AGGCAAGTAAACCATTGGGAC | 58.475 | 47.619 | 7.78 | 2.24 | 38.05 | 4.46 |
55 | 56 | 2.990740 | AGGCAAGTAAACCATTGGGA | 57.009 | 45.000 | 7.78 | 0.00 | 38.05 | 4.37 |
56 | 57 | 4.350368 | AAAAGGCAAGTAAACCATTGGG | 57.650 | 40.909 | 7.78 | 0.00 | 41.29 | 4.12 |
92 | 93 | 7.151976 | GTCCATTTTGTGCCAACTATTTAGTT | 58.848 | 34.615 | 0.00 | 0.00 | 46.76 | 2.24 |
93 | 94 | 6.569610 | CGTCCATTTTGTGCCAACTATTTAGT | 60.570 | 38.462 | 0.00 | 0.00 | 38.39 | 2.24 |
94 | 95 | 5.799936 | CGTCCATTTTGTGCCAACTATTTAG | 59.200 | 40.000 | 0.00 | 0.00 | 0.00 | 1.85 |
95 | 96 | 5.473846 | TCGTCCATTTTGTGCCAACTATTTA | 59.526 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
96 | 97 | 4.279671 | TCGTCCATTTTGTGCCAACTATTT | 59.720 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
97 | 98 | 3.823873 | TCGTCCATTTTGTGCCAACTATT | 59.176 | 39.130 | 0.00 | 0.00 | 0.00 | 1.73 |
98 | 99 | 3.190535 | GTCGTCCATTTTGTGCCAACTAT | 59.809 | 43.478 | 0.00 | 0.00 | 0.00 | 2.12 |
99 | 100 | 2.550606 | GTCGTCCATTTTGTGCCAACTA | 59.449 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
100 | 101 | 1.336755 | GTCGTCCATTTTGTGCCAACT | 59.663 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
101 | 102 | 1.601914 | GGTCGTCCATTTTGTGCCAAC | 60.602 | 52.381 | 0.00 | 0.00 | 0.00 | 3.77 |
102 | 103 | 0.671251 | GGTCGTCCATTTTGTGCCAA | 59.329 | 50.000 | 0.00 | 0.00 | 0.00 | 4.52 |
103 | 104 | 1.175983 | GGGTCGTCCATTTTGTGCCA | 61.176 | 55.000 | 0.04 | 0.00 | 35.00 | 4.92 |
104 | 105 | 1.175983 | TGGGTCGTCCATTTTGTGCC | 61.176 | 55.000 | 0.04 | 0.00 | 41.46 | 5.01 |
105 | 106 | 0.671251 | TTGGGTCGTCCATTTTGTGC | 59.329 | 50.000 | 0.04 | 0.00 | 46.52 | 4.57 |
106 | 107 | 3.658757 | ATTTGGGTCGTCCATTTTGTG | 57.341 | 42.857 | 0.04 | 0.00 | 46.52 | 3.33 |
107 | 108 | 5.105513 | GGAATATTTGGGTCGTCCATTTTGT | 60.106 | 40.000 | 0.04 | 0.00 | 46.52 | 2.83 |
108 | 109 | 5.105554 | TGGAATATTTGGGTCGTCCATTTTG | 60.106 | 40.000 | 0.04 | 0.00 | 46.52 | 2.44 |
109 | 110 | 5.020132 | TGGAATATTTGGGTCGTCCATTTT | 58.980 | 37.500 | 0.04 | 0.00 | 46.52 | 1.82 |
110 | 111 | 4.605183 | TGGAATATTTGGGTCGTCCATTT | 58.395 | 39.130 | 0.04 | 0.00 | 46.52 | 2.32 |
111 | 112 | 4.243793 | TGGAATATTTGGGTCGTCCATT | 57.756 | 40.909 | 0.04 | 0.00 | 46.52 | 3.16 |
112 | 113 | 3.943671 | TGGAATATTTGGGTCGTCCAT | 57.056 | 42.857 | 0.04 | 0.00 | 46.52 | 3.41 |
113 | 114 | 3.722908 | TTGGAATATTTGGGTCGTCCA | 57.277 | 42.857 | 0.04 | 0.00 | 45.43 | 4.02 |
114 | 115 | 4.401202 | ACATTTGGAATATTTGGGTCGTCC | 59.599 | 41.667 | 0.00 | 0.00 | 0.00 | 4.79 |
115 | 116 | 5.339990 | CACATTTGGAATATTTGGGTCGTC | 58.660 | 41.667 | 0.00 | 0.00 | 0.00 | 4.20 |
116 | 117 | 5.323371 | CACATTTGGAATATTTGGGTCGT | 57.677 | 39.130 | 0.00 | 0.00 | 0.00 | 4.34 |
138 | 139 | 0.240945 | CAATCACAGGTTGGTTCGCC | 59.759 | 55.000 | 0.00 | 0.00 | 37.92 | 5.54 |
139 | 140 | 0.240945 | CCAATCACAGGTTGGTTCGC | 59.759 | 55.000 | 0.85 | 0.00 | 40.94 | 4.70 |
140 | 141 | 1.890876 | TCCAATCACAGGTTGGTTCG | 58.109 | 50.000 | 8.75 | 0.00 | 45.05 | 3.95 |
141 | 142 | 2.493278 | CCATCCAATCACAGGTTGGTTC | 59.507 | 50.000 | 8.75 | 0.00 | 45.05 | 3.62 |
142 | 143 | 2.528564 | CCATCCAATCACAGGTTGGTT | 58.471 | 47.619 | 8.75 | 0.00 | 45.05 | 3.67 |
143 | 144 | 2.220653 | CCATCCAATCACAGGTTGGT | 57.779 | 50.000 | 8.75 | 0.00 | 45.05 | 3.67 |
144 | 145 | 2.220653 | ACCATCCAATCACAGGTTGG | 57.779 | 50.000 | 2.61 | 2.61 | 46.76 | 3.77 |
145 | 146 | 4.588899 | TCTAACCATCCAATCACAGGTTG | 58.411 | 43.478 | 0.00 | 0.00 | 42.19 | 3.77 |
146 | 147 | 4.324563 | CCTCTAACCATCCAATCACAGGTT | 60.325 | 45.833 | 0.00 | 0.00 | 44.23 | 3.50 |
147 | 148 | 3.200825 | CCTCTAACCATCCAATCACAGGT | 59.799 | 47.826 | 0.00 | 0.00 | 0.00 | 4.00 |
148 | 149 | 3.434167 | CCCTCTAACCATCCAATCACAGG | 60.434 | 52.174 | 0.00 | 0.00 | 0.00 | 4.00 |
149 | 150 | 3.455910 | TCCCTCTAACCATCCAATCACAG | 59.544 | 47.826 | 0.00 | 0.00 | 0.00 | 3.66 |
150 | 151 | 3.199946 | GTCCCTCTAACCATCCAATCACA | 59.800 | 47.826 | 0.00 | 0.00 | 0.00 | 3.58 |
151 | 152 | 3.456277 | AGTCCCTCTAACCATCCAATCAC | 59.544 | 47.826 | 0.00 | 0.00 | 0.00 | 3.06 |
152 | 153 | 3.455910 | CAGTCCCTCTAACCATCCAATCA | 59.544 | 47.826 | 0.00 | 0.00 | 0.00 | 2.57 |
153 | 154 | 3.456277 | ACAGTCCCTCTAACCATCCAATC | 59.544 | 47.826 | 0.00 | 0.00 | 0.00 | 2.67 |
154 | 155 | 3.200825 | CACAGTCCCTCTAACCATCCAAT | 59.799 | 47.826 | 0.00 | 0.00 | 0.00 | 3.16 |
155 | 156 | 2.571653 | CACAGTCCCTCTAACCATCCAA | 59.428 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
156 | 157 | 2.187958 | CACAGTCCCTCTAACCATCCA | 58.812 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
157 | 158 | 1.486726 | CCACAGTCCCTCTAACCATCC | 59.513 | 57.143 | 0.00 | 0.00 | 0.00 | 3.51 |
158 | 159 | 2.188817 | ACCACAGTCCCTCTAACCATC | 58.811 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
159 | 160 | 2.344093 | ACCACAGTCCCTCTAACCAT | 57.656 | 50.000 | 0.00 | 0.00 | 0.00 | 3.55 |
160 | 161 | 3.371965 | GATACCACAGTCCCTCTAACCA | 58.628 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
161 | 162 | 2.699321 | GGATACCACAGTCCCTCTAACC | 59.301 | 54.545 | 0.00 | 0.00 | 0.00 | 2.85 |
177 | 178 | 0.698818 | CCCTAATGGCCTGGGGATAC | 59.301 | 60.000 | 7.63 | 0.00 | 41.25 | 2.24 |
178 | 179 | 0.273781 | ACCCTAATGGCCTGGGGATA | 59.726 | 55.000 | 19.19 | 0.00 | 44.97 | 2.59 |
179 | 180 | 0.630478 | AACCCTAATGGCCTGGGGAT | 60.630 | 55.000 | 19.19 | 5.43 | 44.97 | 3.85 |
180 | 181 | 1.230482 | AACCCTAATGGCCTGGGGA | 60.230 | 57.895 | 19.19 | 0.00 | 44.97 | 4.81 |
181 | 182 | 1.230212 | GAACCCTAATGGCCTGGGG | 59.770 | 63.158 | 21.58 | 17.37 | 44.97 | 4.96 |
182 | 183 | 0.334676 | TTGAACCCTAATGGCCTGGG | 59.665 | 55.000 | 17.89 | 17.89 | 46.07 | 4.45 |
183 | 184 | 1.005924 | ACTTGAACCCTAATGGCCTGG | 59.994 | 52.381 | 3.32 | 0.59 | 37.83 | 4.45 |
184 | 185 | 2.369394 | GACTTGAACCCTAATGGCCTG | 58.631 | 52.381 | 3.32 | 0.00 | 37.83 | 4.85 |
185 | 186 | 1.285078 | GGACTTGAACCCTAATGGCCT | 59.715 | 52.381 | 3.32 | 0.00 | 37.83 | 5.19 |
186 | 187 | 1.285078 | AGGACTTGAACCCTAATGGCC | 59.715 | 52.381 | 0.00 | 0.00 | 37.83 | 5.36 |
187 | 188 | 2.369394 | CAGGACTTGAACCCTAATGGC | 58.631 | 52.381 | 0.00 | 0.00 | 37.83 | 4.40 |
188 | 189 | 2.308866 | ACCAGGACTTGAACCCTAATGG | 59.691 | 50.000 | 0.00 | 0.00 | 41.37 | 3.16 |
189 | 190 | 3.347216 | CACCAGGACTTGAACCCTAATG | 58.653 | 50.000 | 0.00 | 0.00 | 0.00 | 1.90 |
190 | 191 | 2.290960 | GCACCAGGACTTGAACCCTAAT | 60.291 | 50.000 | 0.00 | 0.00 | 0.00 | 1.73 |
191 | 192 | 1.073284 | GCACCAGGACTTGAACCCTAA | 59.927 | 52.381 | 0.00 | 0.00 | 0.00 | 2.69 |
192 | 193 | 0.690762 | GCACCAGGACTTGAACCCTA | 59.309 | 55.000 | 0.00 | 0.00 | 0.00 | 3.53 |
193 | 194 | 1.062488 | AGCACCAGGACTTGAACCCT | 61.062 | 55.000 | 0.00 | 0.00 | 0.00 | 4.34 |
194 | 195 | 0.606673 | GAGCACCAGGACTTGAACCC | 60.607 | 60.000 | 0.00 | 0.00 | 0.00 | 4.11 |
195 | 196 | 0.951040 | CGAGCACCAGGACTTGAACC | 60.951 | 60.000 | 0.00 | 0.00 | 0.00 | 3.62 |
196 | 197 | 1.569479 | GCGAGCACCAGGACTTGAAC | 61.569 | 60.000 | 0.00 | 0.00 | 0.00 | 3.18 |
197 | 198 | 1.301716 | GCGAGCACCAGGACTTGAA | 60.302 | 57.895 | 0.00 | 0.00 | 0.00 | 2.69 |
198 | 199 | 1.830587 | ATGCGAGCACCAGGACTTGA | 61.831 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
199 | 200 | 0.957395 | AATGCGAGCACCAGGACTTG | 60.957 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
200 | 201 | 0.250901 | AAATGCGAGCACCAGGACTT | 60.251 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
201 | 202 | 0.613260 | TAAATGCGAGCACCAGGACT | 59.387 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
202 | 203 | 1.668419 | ATAAATGCGAGCACCAGGAC | 58.332 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
203 | 204 | 2.092968 | AGAATAAATGCGAGCACCAGGA | 60.093 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
204 | 205 | 2.292267 | AGAATAAATGCGAGCACCAGG | 58.708 | 47.619 | 0.00 | 0.00 | 0.00 | 4.45 |
205 | 206 | 3.374988 | TCAAGAATAAATGCGAGCACCAG | 59.625 | 43.478 | 0.00 | 0.00 | 0.00 | 4.00 |
206 | 207 | 3.342719 | TCAAGAATAAATGCGAGCACCA | 58.657 | 40.909 | 0.00 | 0.00 | 0.00 | 4.17 |
207 | 208 | 4.355543 | TTCAAGAATAAATGCGAGCACC | 57.644 | 40.909 | 0.00 | 0.00 | 0.00 | 5.01 |
208 | 209 | 5.228635 | CACATTCAAGAATAAATGCGAGCAC | 59.771 | 40.000 | 0.00 | 0.00 | 36.54 | 4.40 |
209 | 210 | 5.106197 | ACACATTCAAGAATAAATGCGAGCA | 60.106 | 36.000 | 0.00 | 0.00 | 36.54 | 4.26 |
210 | 211 | 5.335127 | ACACATTCAAGAATAAATGCGAGC | 58.665 | 37.500 | 0.00 | 0.00 | 36.54 | 5.03 |
211 | 212 | 7.538334 | TGAAACACATTCAAGAATAAATGCGAG | 59.462 | 33.333 | 0.00 | 0.00 | 44.94 | 5.03 |
212 | 213 | 7.366513 | TGAAACACATTCAAGAATAAATGCGA | 58.633 | 30.769 | 0.00 | 0.00 | 44.94 | 5.10 |
213 | 214 | 7.565450 | TGAAACACATTCAAGAATAAATGCG | 57.435 | 32.000 | 0.00 | 0.00 | 44.94 | 4.73 |
225 | 226 | 3.505680 | CCGGAAATCCTGAAACACATTCA | 59.494 | 43.478 | 0.00 | 0.00 | 45.71 | 2.57 |
226 | 227 | 3.673323 | GCCGGAAATCCTGAAACACATTC | 60.673 | 47.826 | 5.05 | 0.00 | 38.60 | 2.67 |
227 | 228 | 2.231235 | GCCGGAAATCCTGAAACACATT | 59.769 | 45.455 | 5.05 | 0.00 | 0.00 | 2.71 |
228 | 229 | 1.818674 | GCCGGAAATCCTGAAACACAT | 59.181 | 47.619 | 5.05 | 0.00 | 0.00 | 3.21 |
229 | 230 | 1.243902 | GCCGGAAATCCTGAAACACA | 58.756 | 50.000 | 5.05 | 0.00 | 0.00 | 3.72 |
230 | 231 | 0.168128 | CGCCGGAAATCCTGAAACAC | 59.832 | 55.000 | 5.05 | 0.00 | 0.00 | 3.32 |
231 | 232 | 0.035598 | TCGCCGGAAATCCTGAAACA | 59.964 | 50.000 | 5.05 | 0.00 | 0.00 | 2.83 |
232 | 233 | 1.064060 | CATCGCCGGAAATCCTGAAAC | 59.936 | 52.381 | 5.05 | 0.00 | 0.00 | 2.78 |
233 | 234 | 1.378531 | CATCGCCGGAAATCCTGAAA | 58.621 | 50.000 | 5.05 | 0.00 | 0.00 | 2.69 |
234 | 235 | 1.095228 | GCATCGCCGGAAATCCTGAA | 61.095 | 55.000 | 5.05 | 0.00 | 0.00 | 3.02 |
235 | 236 | 1.523711 | GCATCGCCGGAAATCCTGA | 60.524 | 57.895 | 5.05 | 0.00 | 0.00 | 3.86 |
236 | 237 | 2.885676 | CGCATCGCCGGAAATCCTG | 61.886 | 63.158 | 5.05 | 0.00 | 0.00 | 3.86 |
237 | 238 | 2.588877 | CGCATCGCCGGAAATCCT | 60.589 | 61.111 | 5.05 | 0.00 | 0.00 | 3.24 |
248 | 249 | 1.769098 | CTCCCACTGAATGCGCATCG | 61.769 | 60.000 | 25.53 | 17.09 | 0.00 | 3.84 |
249 | 250 | 1.442526 | CCTCCCACTGAATGCGCATC | 61.443 | 60.000 | 25.53 | 17.12 | 0.00 | 3.91 |
250 | 251 | 1.452651 | CCTCCCACTGAATGCGCAT | 60.453 | 57.895 | 19.28 | 19.28 | 0.00 | 4.73 |
251 | 252 | 2.046023 | CCTCCCACTGAATGCGCA | 60.046 | 61.111 | 14.96 | 14.96 | 0.00 | 6.09 |
252 | 253 | 1.817099 | CTCCTCCCACTGAATGCGC | 60.817 | 63.158 | 0.00 | 0.00 | 0.00 | 6.09 |
253 | 254 | 0.460987 | GTCTCCTCCCACTGAATGCG | 60.461 | 60.000 | 0.00 | 0.00 | 0.00 | 4.73 |
254 | 255 | 0.460987 | CGTCTCCTCCCACTGAATGC | 60.461 | 60.000 | 0.00 | 0.00 | 0.00 | 3.56 |
255 | 256 | 0.898320 | ACGTCTCCTCCCACTGAATG | 59.102 | 55.000 | 0.00 | 0.00 | 0.00 | 2.67 |
256 | 257 | 1.550976 | GAACGTCTCCTCCCACTGAAT | 59.449 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
257 | 258 | 0.966920 | GAACGTCTCCTCCCACTGAA | 59.033 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
258 | 259 | 0.898789 | GGAACGTCTCCTCCCACTGA | 60.899 | 60.000 | 8.87 | 0.00 | 41.61 | 3.41 |
259 | 260 | 1.592223 | GGAACGTCTCCTCCCACTG | 59.408 | 63.158 | 8.87 | 0.00 | 41.61 | 3.66 |
260 | 261 | 4.115270 | GGAACGTCTCCTCCCACT | 57.885 | 61.111 | 8.87 | 0.00 | 41.61 | 4.00 |
279 | 280 | 1.654105 | CGTAGGCATCTCGTTGTCAAC | 59.346 | 52.381 | 5.58 | 5.58 | 0.00 | 3.18 |
280 | 281 | 1.403647 | CCGTAGGCATCTCGTTGTCAA | 60.404 | 52.381 | 0.00 | 0.00 | 46.14 | 3.18 |
281 | 282 | 0.172578 | CCGTAGGCATCTCGTTGTCA | 59.827 | 55.000 | 0.00 | 0.00 | 46.14 | 3.58 |
282 | 283 | 2.959275 | CCGTAGGCATCTCGTTGTC | 58.041 | 57.895 | 0.00 | 0.00 | 46.14 | 3.18 |
295 | 296 | 6.364165 | TCTTGAAATTTACGAAGTCACCGTAG | 59.636 | 38.462 | 0.00 | 0.00 | 43.93 | 3.51 |
296 | 297 | 6.215121 | TCTTGAAATTTACGAAGTCACCGTA | 58.785 | 36.000 | 0.00 | 0.00 | 43.93 | 4.02 |
297 | 298 | 5.051816 | TCTTGAAATTTACGAAGTCACCGT | 58.948 | 37.500 | 0.00 | 0.00 | 43.93 | 4.83 |
298 | 299 | 5.585500 | TCTTGAAATTTACGAAGTCACCG | 57.415 | 39.130 | 0.00 | 0.00 | 43.93 | 4.94 |
299 | 300 | 7.129109 | TCATCTTGAAATTTACGAAGTCACC | 57.871 | 36.000 | 0.00 | 0.00 | 43.93 | 4.02 |
304 | 305 | 9.573102 | CGACATATCATCTTGAAATTTACGAAG | 57.427 | 33.333 | 0.00 | 0.00 | 0.00 | 3.79 |
305 | 306 | 8.547894 | CCGACATATCATCTTGAAATTTACGAA | 58.452 | 33.333 | 0.00 | 0.00 | 0.00 | 3.85 |
306 | 307 | 7.307160 | GCCGACATATCATCTTGAAATTTACGA | 60.307 | 37.037 | 0.00 | 0.00 | 0.00 | 3.43 |
307 | 308 | 6.792250 | GCCGACATATCATCTTGAAATTTACG | 59.208 | 38.462 | 0.00 | 0.00 | 0.00 | 3.18 |
308 | 309 | 7.865707 | AGCCGACATATCATCTTGAAATTTAC | 58.134 | 34.615 | 0.00 | 0.00 | 0.00 | 2.01 |
309 | 310 | 7.714813 | TGAGCCGACATATCATCTTGAAATTTA | 59.285 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
310 | 311 | 6.543465 | TGAGCCGACATATCATCTTGAAATTT | 59.457 | 34.615 | 0.00 | 0.00 | 0.00 | 1.82 |
311 | 312 | 6.057533 | TGAGCCGACATATCATCTTGAAATT | 58.942 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
312 | 313 | 5.614308 | TGAGCCGACATATCATCTTGAAAT | 58.386 | 37.500 | 0.00 | 0.00 | 0.00 | 2.17 |
313 | 314 | 5.022282 | TGAGCCGACATATCATCTTGAAA | 57.978 | 39.130 | 0.00 | 0.00 | 0.00 | 2.69 |
314 | 315 | 4.100035 | ACTGAGCCGACATATCATCTTGAA | 59.900 | 41.667 | 0.00 | 0.00 | 0.00 | 2.69 |
315 | 316 | 3.638627 | ACTGAGCCGACATATCATCTTGA | 59.361 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
316 | 317 | 3.986572 | GACTGAGCCGACATATCATCTTG | 59.013 | 47.826 | 0.00 | 0.00 | 0.00 | 3.02 |
317 | 318 | 3.894427 | AGACTGAGCCGACATATCATCTT | 59.106 | 43.478 | 0.00 | 0.00 | 0.00 | 2.40 |
318 | 319 | 3.495331 | AGACTGAGCCGACATATCATCT | 58.505 | 45.455 | 0.00 | 0.00 | 0.00 | 2.90 |
319 | 320 | 3.932545 | AGACTGAGCCGACATATCATC | 57.067 | 47.619 | 0.00 | 0.00 | 0.00 | 2.92 |
320 | 321 | 4.626042 | GAAAGACTGAGCCGACATATCAT | 58.374 | 43.478 | 0.00 | 0.00 | 0.00 | 2.45 |
321 | 322 | 3.489229 | CGAAAGACTGAGCCGACATATCA | 60.489 | 47.826 | 0.00 | 0.00 | 0.00 | 2.15 |
322 | 323 | 3.046390 | CGAAAGACTGAGCCGACATATC | 58.954 | 50.000 | 0.00 | 0.00 | 0.00 | 1.63 |
323 | 324 | 2.223829 | CCGAAAGACTGAGCCGACATAT | 60.224 | 50.000 | 0.00 | 0.00 | 0.00 | 1.78 |
324 | 325 | 1.134367 | CCGAAAGACTGAGCCGACATA | 59.866 | 52.381 | 0.00 | 0.00 | 0.00 | 2.29 |
325 | 326 | 0.108615 | CCGAAAGACTGAGCCGACAT | 60.109 | 55.000 | 0.00 | 0.00 | 0.00 | 3.06 |
326 | 327 | 1.176619 | TCCGAAAGACTGAGCCGACA | 61.177 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 |
327 | 328 | 0.456995 | CTCCGAAAGACTGAGCCGAC | 60.457 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
328 | 329 | 1.595993 | CCTCCGAAAGACTGAGCCGA | 61.596 | 60.000 | 0.00 | 0.00 | 0.00 | 5.54 |
329 | 330 | 1.153745 | CCTCCGAAAGACTGAGCCG | 60.154 | 63.158 | 0.00 | 0.00 | 0.00 | 5.52 |
330 | 331 | 1.135053 | GTACCTCCGAAAGACTGAGCC | 60.135 | 57.143 | 0.00 | 0.00 | 0.00 | 4.70 |
331 | 332 | 1.819903 | AGTACCTCCGAAAGACTGAGC | 59.180 | 52.381 | 0.00 | 0.00 | 0.00 | 4.26 |
332 | 333 | 5.838531 | ATAAGTACCTCCGAAAGACTGAG | 57.161 | 43.478 | 0.00 | 0.00 | 0.00 | 3.35 |
333 | 334 | 5.826737 | CCTATAAGTACCTCCGAAAGACTGA | 59.173 | 44.000 | 0.00 | 0.00 | 0.00 | 3.41 |
334 | 335 | 5.009811 | CCCTATAAGTACCTCCGAAAGACTG | 59.990 | 48.000 | 0.00 | 0.00 | 0.00 | 3.51 |
335 | 336 | 5.139001 | CCCTATAAGTACCTCCGAAAGACT | 58.861 | 45.833 | 0.00 | 0.00 | 0.00 | 3.24 |
336 | 337 | 4.280425 | CCCCTATAAGTACCTCCGAAAGAC | 59.720 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
337 | 338 | 4.078980 | ACCCCTATAAGTACCTCCGAAAGA | 60.079 | 45.833 | 0.00 | 0.00 | 0.00 | 2.52 |
338 | 339 | 4.221530 | ACCCCTATAAGTACCTCCGAAAG | 58.778 | 47.826 | 0.00 | 0.00 | 0.00 | 2.62 |
339 | 340 | 4.270317 | ACCCCTATAAGTACCTCCGAAA | 57.730 | 45.455 | 0.00 | 0.00 | 0.00 | 3.46 |
340 | 341 | 3.979501 | ACCCCTATAAGTACCTCCGAA | 57.020 | 47.619 | 0.00 | 0.00 | 0.00 | 4.30 |
341 | 342 | 3.331889 | CCTACCCCTATAAGTACCTCCGA | 59.668 | 52.174 | 0.00 | 0.00 | 0.00 | 4.55 |
342 | 343 | 3.075134 | ACCTACCCCTATAAGTACCTCCG | 59.925 | 52.174 | 0.00 | 0.00 | 0.00 | 4.63 |
343 | 344 | 4.140829 | ACACCTACCCCTATAAGTACCTCC | 60.141 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
344 | 345 | 4.831710 | CACACCTACCCCTATAAGTACCTC | 59.168 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
345 | 346 | 4.812653 | CACACCTACCCCTATAAGTACCT | 58.187 | 47.826 | 0.00 | 0.00 | 0.00 | 3.08 |
346 | 347 | 3.323115 | GCACACCTACCCCTATAAGTACC | 59.677 | 52.174 | 0.00 | 0.00 | 0.00 | 3.34 |
347 | 348 | 3.005155 | CGCACACCTACCCCTATAAGTAC | 59.995 | 52.174 | 0.00 | 0.00 | 0.00 | 2.73 |
348 | 349 | 3.225104 | CGCACACCTACCCCTATAAGTA | 58.775 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
349 | 350 | 2.037144 | CGCACACCTACCCCTATAAGT | 58.963 | 52.381 | 0.00 | 0.00 | 0.00 | 2.24 |
350 | 351 | 2.037144 | ACGCACACCTACCCCTATAAG | 58.963 | 52.381 | 0.00 | 0.00 | 0.00 | 1.73 |
351 | 352 | 1.758280 | CACGCACACCTACCCCTATAA | 59.242 | 52.381 | 0.00 | 0.00 | 0.00 | 0.98 |
352 | 353 | 1.342275 | ACACGCACACCTACCCCTATA | 60.342 | 52.381 | 0.00 | 0.00 | 0.00 | 1.31 |
353 | 354 | 0.616679 | ACACGCACACCTACCCCTAT | 60.617 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
354 | 355 | 1.228956 | ACACGCACACCTACCCCTA | 60.229 | 57.895 | 0.00 | 0.00 | 0.00 | 3.53 |
355 | 356 | 2.525877 | ACACGCACACCTACCCCT | 60.526 | 61.111 | 0.00 | 0.00 | 0.00 | 4.79 |
356 | 357 | 2.358247 | CACACGCACACCTACCCC | 60.358 | 66.667 | 0.00 | 0.00 | 0.00 | 4.95 |
357 | 358 | 1.959226 | CACACACGCACACCTACCC | 60.959 | 63.158 | 0.00 | 0.00 | 0.00 | 3.69 |
358 | 359 | 2.604174 | GCACACACGCACACCTACC | 61.604 | 63.158 | 0.00 | 0.00 | 0.00 | 3.18 |
359 | 360 | 2.935955 | GCACACACGCACACCTAC | 59.064 | 61.111 | 0.00 | 0.00 | 0.00 | 3.18 |
360 | 361 | 2.660224 | CGCACACACGCACACCTA | 60.660 | 61.111 | 0.00 | 0.00 | 0.00 | 3.08 |
361 | 362 | 4.830765 | ACGCACACACGCACACCT | 62.831 | 61.111 | 0.00 | 0.00 | 36.19 | 4.00 |
362 | 363 | 3.783588 | GAACGCACACACGCACACC | 62.784 | 63.158 | 0.00 | 0.00 | 36.19 | 4.16 |
363 | 364 | 2.350760 | GAACGCACACACGCACAC | 60.351 | 61.111 | 0.00 | 0.00 | 36.19 | 3.82 |
364 | 365 | 0.876342 | TATGAACGCACACACGCACA | 60.876 | 50.000 | 0.00 | 0.00 | 36.19 | 4.57 |
365 | 366 | 0.179250 | CTATGAACGCACACACGCAC | 60.179 | 55.000 | 0.00 | 0.00 | 36.19 | 5.34 |
366 | 367 | 1.288419 | CCTATGAACGCACACACGCA | 61.288 | 55.000 | 0.00 | 0.00 | 36.19 | 5.24 |
367 | 368 | 1.419922 | CCTATGAACGCACACACGC | 59.580 | 57.895 | 0.00 | 0.00 | 36.19 | 5.34 |
368 | 369 | 1.358725 | CCCCTATGAACGCACACACG | 61.359 | 60.000 | 0.00 | 0.00 | 39.50 | 4.49 |
369 | 370 | 0.321298 | ACCCCTATGAACGCACACAC | 60.321 | 55.000 | 0.00 | 0.00 | 0.00 | 3.82 |
370 | 371 | 0.321210 | CACCCCTATGAACGCACACA | 60.321 | 55.000 | 0.00 | 0.00 | 0.00 | 3.72 |
371 | 372 | 0.036765 | TCACCCCTATGAACGCACAC | 60.037 | 55.000 | 0.00 | 0.00 | 0.00 | 3.82 |
372 | 373 | 0.249120 | CTCACCCCTATGAACGCACA | 59.751 | 55.000 | 0.00 | 0.00 | 0.00 | 4.57 |
373 | 374 | 0.249398 | ACTCACCCCTATGAACGCAC | 59.751 | 55.000 | 0.00 | 0.00 | 0.00 | 5.34 |
374 | 375 | 0.249120 | CACTCACCCCTATGAACGCA | 59.751 | 55.000 | 0.00 | 0.00 | 0.00 | 5.24 |
375 | 376 | 0.249398 | ACACTCACCCCTATGAACGC | 59.751 | 55.000 | 0.00 | 0.00 | 0.00 | 4.84 |
376 | 377 | 3.717707 | CATACACTCACCCCTATGAACG | 58.282 | 50.000 | 0.00 | 0.00 | 0.00 | 3.95 |
377 | 378 | 3.467803 | GCATACACTCACCCCTATGAAC | 58.532 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
378 | 379 | 2.102420 | CGCATACACTCACCCCTATGAA | 59.898 | 50.000 | 0.00 | 0.00 | 0.00 | 2.57 |
379 | 380 | 1.686587 | CGCATACACTCACCCCTATGA | 59.313 | 52.381 | 0.00 | 0.00 | 0.00 | 2.15 |
380 | 381 | 1.873903 | GCGCATACACTCACCCCTATG | 60.874 | 57.143 | 0.30 | 0.00 | 0.00 | 2.23 |
381 | 382 | 0.393077 | GCGCATACACTCACCCCTAT | 59.607 | 55.000 | 0.30 | 0.00 | 0.00 | 2.57 |
382 | 383 | 1.820581 | GCGCATACACTCACCCCTA | 59.179 | 57.895 | 0.30 | 0.00 | 0.00 | 3.53 |
383 | 384 | 2.584608 | GCGCATACACTCACCCCT | 59.415 | 61.111 | 0.30 | 0.00 | 0.00 | 4.79 |
384 | 385 | 2.890474 | CGCGCATACACTCACCCC | 60.890 | 66.667 | 8.75 | 0.00 | 0.00 | 4.95 |
385 | 386 | 2.125673 | ACGCGCATACACTCACCC | 60.126 | 61.111 | 5.73 | 0.00 | 0.00 | 4.61 |
386 | 387 | 0.457166 | TACACGCGCATACACTCACC | 60.457 | 55.000 | 5.73 | 0.00 | 0.00 | 4.02 |
387 | 388 | 1.556564 | ATACACGCGCATACACTCAC | 58.443 | 50.000 | 5.73 | 0.00 | 0.00 | 3.51 |
388 | 389 | 3.636282 | ATATACACGCGCATACACTCA | 57.364 | 42.857 | 5.73 | 0.00 | 0.00 | 3.41 |
389 | 390 | 4.030306 | GCTAATATACACGCGCATACACTC | 59.970 | 45.833 | 5.73 | 0.00 | 0.00 | 3.51 |
390 | 391 | 3.918591 | GCTAATATACACGCGCATACACT | 59.081 | 43.478 | 5.73 | 0.00 | 0.00 | 3.55 |
391 | 392 | 3.241239 | CGCTAATATACACGCGCATACAC | 60.241 | 47.826 | 5.73 | 0.00 | 39.11 | 2.90 |
392 | 393 | 2.912345 | CGCTAATATACACGCGCATACA | 59.088 | 45.455 | 5.73 | 0.00 | 39.11 | 2.29 |
393 | 394 | 3.532213 | CGCTAATATACACGCGCATAC | 57.468 | 47.619 | 5.73 | 0.00 | 39.11 | 2.39 |
400 | 401 | 1.784856 | ACGCAAGCGCTAATATACACG | 59.215 | 47.619 | 12.05 | 8.49 | 44.19 | 4.49 |
401 | 402 | 2.155155 | GGACGCAAGCGCTAATATACAC | 59.845 | 50.000 | 12.05 | 0.00 | 44.19 | 2.90 |
402 | 403 | 2.400399 | GGACGCAAGCGCTAATATACA | 58.600 | 47.619 | 12.05 | 0.00 | 44.19 | 2.29 |
403 | 404 | 1.385743 | CGGACGCAAGCGCTAATATAC | 59.614 | 52.381 | 12.05 | 0.71 | 44.19 | 1.47 |
404 | 405 | 1.001048 | ACGGACGCAAGCGCTAATATA | 60.001 | 47.619 | 12.05 | 0.00 | 44.19 | 0.86 |
405 | 406 | 0.249322 | ACGGACGCAAGCGCTAATAT | 60.249 | 50.000 | 12.05 | 0.00 | 44.19 | 1.28 |
406 | 407 | 0.381445 | TACGGACGCAAGCGCTAATA | 59.619 | 50.000 | 12.05 | 0.00 | 44.19 | 0.98 |
407 | 408 | 0.249322 | ATACGGACGCAAGCGCTAAT | 60.249 | 50.000 | 12.05 | 0.00 | 44.19 | 1.73 |
408 | 409 | 0.458889 | AATACGGACGCAAGCGCTAA | 60.459 | 50.000 | 12.05 | 0.00 | 44.19 | 3.09 |
409 | 410 | 0.381445 | TAATACGGACGCAAGCGCTA | 59.619 | 50.000 | 12.05 | 0.00 | 44.19 | 4.26 |
410 | 411 | 1.140161 | TAATACGGACGCAAGCGCT | 59.860 | 52.632 | 15.09 | 2.64 | 44.19 | 5.92 |
411 | 412 | 1.271840 | GTAATACGGACGCAAGCGC | 59.728 | 57.895 | 15.09 | 0.00 | 44.19 | 5.92 |
412 | 413 | 1.551779 | CGTAATACGGACGCAAGCG | 59.448 | 57.895 | 13.50 | 13.50 | 40.81 | 4.68 |
435 | 436 | 9.677567 | GCGTGTCACATTTGGAATATATATTTT | 57.322 | 29.630 | 9.33 | 0.00 | 0.00 | 1.82 |
436 | 437 | 9.066892 | AGCGTGTCACATTTGGAATATATATTT | 57.933 | 29.630 | 9.33 | 0.00 | 0.00 | 1.40 |
437 | 438 | 8.621532 | AGCGTGTCACATTTGGAATATATATT | 57.378 | 30.769 | 7.72 | 7.72 | 0.00 | 1.28 |
438 | 439 | 9.371136 | CTAGCGTGTCACATTTGGAATATATAT | 57.629 | 33.333 | 3.42 | 0.00 | 0.00 | 0.86 |
439 | 440 | 8.581578 | TCTAGCGTGTCACATTTGGAATATATA | 58.418 | 33.333 | 3.42 | 0.00 | 0.00 | 0.86 |
440 | 441 | 7.441836 | TCTAGCGTGTCACATTTGGAATATAT | 58.558 | 34.615 | 3.42 | 0.00 | 0.00 | 0.86 |
441 | 442 | 6.811954 | TCTAGCGTGTCACATTTGGAATATA | 58.188 | 36.000 | 3.42 | 0.00 | 0.00 | 0.86 |
519 | 520 | 9.997482 | TCAGTTTTCCGAATAATTTTATAGTGC | 57.003 | 29.630 | 0.00 | 0.00 | 0.00 | 4.40 |
532 | 533 | 7.891561 | TGGTGAAAATTATCAGTTTTCCGAAT | 58.108 | 30.769 | 8.37 | 0.00 | 42.20 | 3.34 |
533 | 534 | 7.278461 | TGGTGAAAATTATCAGTTTTCCGAA | 57.722 | 32.000 | 8.37 | 0.00 | 42.20 | 4.30 |
535 | 536 | 5.572896 | GCTGGTGAAAATTATCAGTTTTCCG | 59.427 | 40.000 | 8.37 | 0.00 | 42.20 | 4.30 |
541 | 542 | 5.716228 | TGATTGGCTGGTGAAAATTATCAGT | 59.284 | 36.000 | 0.00 | 0.00 | 0.00 | 3.41 |
702 | 713 | 1.553704 | GAGGTGGAGTTTGGTCCGTAT | 59.446 | 52.381 | 0.00 | 0.00 | 39.81 | 3.06 |
883 | 911 | 0.771127 | CTTGTGGTGGGGGAAGAAGA | 59.229 | 55.000 | 0.00 | 0.00 | 0.00 | 2.87 |
902 | 930 | 2.617274 | GGCGAGTTGTTGGTGGAGC | 61.617 | 63.158 | 0.00 | 0.00 | 0.00 | 4.70 |
1200 | 1261 | 0.618680 | AGGCCATGTAGAGCACCTCA | 60.619 | 55.000 | 5.01 | 0.00 | 32.06 | 3.86 |
1305 | 1366 | 2.680352 | GAGACGGGCTCCCTGACA | 60.680 | 66.667 | 0.00 | 0.00 | 37.69 | 3.58 |
1509 | 1570 | 4.477975 | GTGCTCCCGGACTCGTCG | 62.478 | 72.222 | 0.73 | 0.00 | 33.95 | 5.12 |
1617 | 1678 | 1.753463 | GATCTCGAGGGGTGTCCGT | 60.753 | 63.158 | 13.56 | 0.00 | 41.52 | 4.69 |
1774 | 1835 | 4.168291 | GGAGCCGGGAGAAGCAGG | 62.168 | 72.222 | 2.18 | 0.00 | 0.00 | 4.85 |
1800 | 1861 | 0.545548 | AGGAACCGGAGAAGGAAGCT | 60.546 | 55.000 | 9.46 | 0.00 | 34.73 | 3.74 |
1839 | 1903 | 2.285743 | GTCTTGCCCTCCCTCCCT | 60.286 | 66.667 | 0.00 | 0.00 | 0.00 | 4.20 |
2562 | 6138 | 4.416601 | CCCTTCCTCCCCCTCCGT | 62.417 | 72.222 | 0.00 | 0.00 | 0.00 | 4.69 |
2580 | 6156 | 2.819595 | CGTATGGCGCCACTGCTT | 60.820 | 61.111 | 35.50 | 19.10 | 34.43 | 3.91 |
2586 | 6162 | 4.823419 | CCGAACCGTATGGCGCCA | 62.823 | 66.667 | 34.80 | 34.80 | 39.70 | 5.69 |
2751 | 6354 | 1.874872 | ACCACGGTAAAAACACATCGG | 59.125 | 47.619 | 0.00 | 0.00 | 0.00 | 4.18 |
2830 | 6433 | 4.617959 | AGCATCATCTTATTGCAACATGC | 58.382 | 39.130 | 0.00 | 7.26 | 45.29 | 4.06 |
2854 | 6457 | 9.601217 | AACATGATCCATAGTACAACTAAAGAC | 57.399 | 33.333 | 0.00 | 0.00 | 33.89 | 3.01 |
2869 | 6472 | 5.327732 | ACCAGAGTTCAAAACATGATCCAT | 58.672 | 37.500 | 0.00 | 0.00 | 38.03 | 3.41 |
2915 | 6519 | 6.978080 | GTCTCCATTAGCAGAGAAGAAAGTAG | 59.022 | 42.308 | 0.00 | 0.00 | 40.69 | 2.57 |
3039 | 6884 | 6.516355 | CACATTAGTTTCTTGATTGTTCGTCG | 59.484 | 38.462 | 0.00 | 0.00 | 0.00 | 5.12 |
3111 | 6957 | 8.492673 | TGTTACCAACTAGCTTGATAATTCAG | 57.507 | 34.615 | 1.04 | 0.00 | 32.27 | 3.02 |
3210 | 7056 | 6.553953 | TTAGGTAAGAATGCTATCACACCA | 57.446 | 37.500 | 11.83 | 0.00 | 31.38 | 4.17 |
3398 | 7248 | 7.388460 | ACAAATTTTCATGCAAGGACAAAAA | 57.612 | 28.000 | 0.00 | 0.00 | 0.00 | 1.94 |
3482 | 7332 | 5.107065 | GGAAATCCTAGTTCACTTTGTCGTG | 60.107 | 44.000 | 0.00 | 0.00 | 36.25 | 4.35 |
3533 | 7383 | 7.509141 | ACTAATCACATCATTTGTCACACAA | 57.491 | 32.000 | 0.00 | 0.00 | 36.00 | 3.33 |
3610 | 7860 | 3.473147 | CTCTTCCCAGAGCACATGG | 57.527 | 57.895 | 0.00 | 0.00 | 40.39 | 3.66 |
![](/static/images/cyverse_long.png)
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.