Multiple sequence alignment - TraesCS4D01G011600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G011600 chr4D 100.000 4152 0 0 1 4152 5577955 5582106 0.000000e+00 7668.0
1 TraesCS4D01G011600 chr4D 82.462 650 78 13 1787 2415 5572715 5573349 1.700000e-148 536.0
2 TraesCS4D01G011600 chr4D 91.837 147 12 0 1513 1659 5572345 5572491 5.440000e-49 206.0
3 TraesCS4D01G011600 chr4D 88.961 154 12 4 701 850 5571552 5571704 7.090000e-43 185.0
4 TraesCS4D01G011600 chr4D 81.548 168 30 1 268 434 5570096 5570263 2.010000e-28 137.0
5 TraesCS4D01G011600 chr4A 92.145 2075 124 24 703 2765 597946409 597944362 0.000000e+00 2892.0
6 TraesCS4D01G011600 chr4A 95.024 422 19 1 3733 4152 597917260 597916839 0.000000e+00 662.0
7 TraesCS4D01G011600 chr4A 80.078 768 106 27 922 1646 597971298 597970535 1.020000e-145 527.0
8 TraesCS4D01G011600 chr4A 92.208 308 21 2 2667 2974 597944373 597944069 2.290000e-117 433.0
9 TraesCS4D01G011600 chr4A 84.536 388 48 2 1749 2126 597927441 597927056 1.410000e-99 374.0
10 TraesCS4D01G011600 chr4A 89.189 185 20 0 4 188 597948363 597948179 8.980000e-57 231.0
11 TraesCS4D01G011600 chr4A 85.646 209 25 3 175 381 597948153 597947948 9.040000e-52 215.0
12 TraesCS4D01G011600 chr4A 89.474 152 11 4 701 848 597971467 597971317 1.970000e-43 187.0
13 TraesCS4D01G011600 chr4A 98.592 71 1 0 3661 3731 597927135 597927065 4.360000e-25 126.0
14 TraesCS4D01G011600 chr4A 95.455 44 2 0 649 692 597946686 597946643 2.070000e-08 71.3
15 TraesCS4D01G011600 chr4B 85.197 635 67 15 1787 2415 9695168 9695781 9.800000e-176 627.0
16 TraesCS4D01G011600 chr4B 85.435 563 58 9 2973 3519 33180629 33180075 7.790000e-157 564.0
17 TraesCS4D01G011600 chr4B 88.409 440 17 9 3733 4152 9702902 9703327 2.230000e-137 499.0
18 TraesCS4D01G011600 chr4B 78.198 688 108 24 1749 2419 9701622 9702284 6.470000e-108 401.0
19 TraesCS4D01G011600 chr4B 89.226 297 19 3 3116 3412 38021197 38021480 3.950000e-95 359.0
20 TraesCS4D01G011600 chr4B 77.178 482 83 20 2510 2974 9695971 9696442 5.330000e-64 255.0
21 TraesCS4D01G011600 chr4B 93.478 138 9 0 1522 1659 9694804 9694941 5.440000e-49 206.0
22 TraesCS4D01G011600 chr4B 91.304 138 11 1 3523 3660 9680710 9680846 1.970000e-43 187.0
23 TraesCS4D01G011600 chr4B 94.521 73 4 0 3658 3730 9701924 9701996 3.390000e-21 113.0
24 TraesCS4D01G011600 chr4B 100.000 28 0 0 3919 3946 558319147 558319120 8.000000e-03 52.8
25 TraesCS4D01G011600 chr2A 86.332 578 54 10 2973 3532 141182363 141181793 1.280000e-169 606.0
26 TraesCS4D01G011600 chr5B 84.232 501 32 12 2972 3433 13446309 13446801 1.060000e-120 444.0
27 TraesCS4D01G011600 chr5B 87.671 73 7 2 2203 2274 422039936 422039865 2.660000e-12 84.2
28 TraesCS4D01G011600 chr5B 83.562 73 10 2 2185 2256 421860798 421860727 2.680000e-07 67.6
29 TraesCS4D01G011600 chr5B 100.000 33 0 0 3922 3954 147438496 147438528 1.250000e-05 62.1
30 TraesCS4D01G011600 chr5B 97.222 36 1 0 3919 3954 568409770 568409735 1.250000e-05 62.1
31 TraesCS4D01G011600 chr3B 80.808 297 37 13 3247 3532 5203368 5203081 9.040000e-52 215.0
32 TraesCS4D01G011600 chr3B 80.537 298 36 17 3247 3532 3633181 3633468 4.210000e-50 209.0
33 TraesCS4D01G011600 chr3B 79.259 270 38 11 3263 3532 615528714 615528965 5.520000e-39 172.0
34 TraesCS4D01G011600 chr3B 94.286 35 1 1 3912 3946 207831131 207831164 8.000000e-03 52.8
35 TraesCS4D01G011600 chr2D 81.651 218 27 8 3213 3421 51171106 51170893 7.140000e-38 169.0
36 TraesCS4D01G011600 chr2D 78.808 151 27 3 3384 3532 70458275 70458128 3.420000e-16 97.1
37 TraesCS4D01G011600 chr2D 100.000 29 0 0 3918 3946 136461861 136461833 2.000000e-03 54.7
38 TraesCS4D01G011600 chr7D 84.553 123 19 0 1970 2092 602847933 602847811 5.640000e-24 122.0
39 TraesCS4D01G011600 chr3D 82.609 115 17 3 3384 3497 605218361 605218249 9.500000e-17 99.0
40 TraesCS4D01G011600 chr5D 82.407 108 16 3 3384 3490 59220788 59220683 1.590000e-14 91.6
41 TraesCS4D01G011600 chr5D 88.571 70 6 2 2206 2274 357395894 357395826 2.660000e-12 84.2
42 TraesCS4D01G011600 chr5D 86.567 67 9 0 2206 2272 357370985 357370919 1.600000e-09 75.0
43 TraesCS4D01G011600 chr5D 83.562 73 10 2 2185 2256 357079639 357079568 2.680000e-07 67.6
44 TraesCS4D01G011600 chrUn 79.675 123 23 2 3381 3502 45975212 45975333 2.060000e-13 87.9
45 TraesCS4D01G011600 chrUn 97.297 37 1 0 3496 3532 23640937 23640973 3.470000e-06 63.9
46 TraesCS4D01G011600 chrUn 100.000 32 0 0 3501 3532 23648099 23648130 4.480000e-05 60.2
47 TraesCS4D01G011600 chr6A 83.908 87 11 3 3381 3466 24011853 24011937 3.440000e-11 80.5
48 TraesCS4D01G011600 chr6A 97.222 36 1 0 3919 3954 172131214 172131179 1.250000e-05 62.1
49 TraesCS4D01G011600 chr7B 100.000 34 0 0 3921 3954 164975143 164975110 3.470000e-06 63.9
50 TraesCS4D01G011600 chr7B 97.222 36 1 0 3919 3954 521143309 521143274 1.250000e-05 62.1
51 TraesCS4D01G011600 chr5A 88.462 52 6 0 2205 2256 458330432 458330381 3.470000e-06 63.9
52 TraesCS4D01G011600 chr6B 97.059 34 1 0 3499 3532 655848354 655848321 1.610000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G011600 chr4D 5577955 5582106 4151 False 7668.000000 7668 100.000000 1 4152 1 chr4D.!!$F1 4151
1 TraesCS4D01G011600 chr4D 5570096 5573349 3253 False 266.000000 536 86.202000 268 2415 4 chr4D.!!$F2 2147
2 TraesCS4D01G011600 chr4A 597944069 597948363 4294 True 768.460000 2892 90.928600 4 2974 5 chr4A.!!$R3 2970
3 TraesCS4D01G011600 chr4A 597970535 597971467 932 True 357.000000 527 84.776000 701 1646 2 chr4A.!!$R4 945
4 TraesCS4D01G011600 chr4B 33180075 33180629 554 True 564.000000 564 85.435000 2973 3519 1 chr4B.!!$R1 546
5 TraesCS4D01G011600 chr4B 9694804 9696442 1638 False 362.666667 627 85.284333 1522 2974 3 chr4B.!!$F3 1452
6 TraesCS4D01G011600 chr4B 9701622 9703327 1705 False 337.666667 499 87.042667 1749 4152 3 chr4B.!!$F4 2403
7 TraesCS4D01G011600 chr2A 141181793 141182363 570 True 606.000000 606 86.332000 2973 3532 1 chr2A.!!$R1 559

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
589 1452 0.030235 GTTGTCGGGGCAAACTTCAC 59.970 55.0 0.00 0.0 0.00 3.18 F
590 1453 0.106918 TTGTCGGGGCAAACTTCACT 60.107 50.0 0.00 0.0 0.00 3.41 F
1030 2477 0.108186 TACTGCTGCTGGATTCCACG 60.108 55.0 11.29 0.0 0.00 4.94 F
2017 3625 0.601558 GTCAACTGGCTCGACAGGTA 59.398 55.0 4.57 0.0 42.75 3.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2094 3702 1.202348 GTTGTTGTGGGCTAAGATGGC 59.798 52.381 0.00 0.00 0.00 4.40 R
2172 3798 2.159212 TCTTGTTCTTCACGACGTCCAA 60.159 45.455 10.58 4.79 0.00 3.53 R
3002 4956 0.605319 GTCGACCTCAATGGCACCAA 60.605 55.000 3.51 0.00 40.22 3.67 R
3674 5644 0.030369 GGATGTAGTGACCGGCGTAG 59.970 60.000 6.01 0.00 0.00 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 8.909708 TTTTATTGCGGTTATTTTGATCTGAG 57.090 30.769 0.00 0.00 0.00 3.35
75 76 9.120538 ACAATAGTCTTTGTGTTTGTATTGAGT 57.879 29.630 0.00 0.00 38.37 3.41
146 147 5.536538 TCATATACTCAGAGTTTGGAGCGAT 59.463 40.000 8.80 0.00 34.48 4.58
147 148 6.715264 TCATATACTCAGAGTTTGGAGCGATA 59.285 38.462 8.80 0.00 34.48 2.92
160 161 8.031864 AGTTTGGAGCGATATGTATCTGAATAG 58.968 37.037 0.00 0.00 0.00 1.73
165 166 7.913297 GGAGCGATATGTATCTGAATAGAACTC 59.087 40.741 0.00 0.00 36.32 3.01
169 170 8.880750 CGATATGTATCTGAATAGAACTCGGTA 58.119 37.037 0.00 0.00 36.32 4.02
177 178 5.752650 TGAATAGAACTCGGTAGAAGGAGA 58.247 41.667 0.00 0.00 34.40 3.71
179 180 2.358015 AGAACTCGGTAGAAGGAGACG 58.642 52.381 0.00 0.00 34.40 4.18
184 185 1.726533 CGGTAGAAGGAGACGAGGCC 61.727 65.000 0.00 0.00 0.00 5.19
188 189 0.539051 AGAAGGAGACGAGGCCATTG 59.461 55.000 5.01 0.00 0.00 2.82
190 191 0.250513 AAGGAGACGAGGCCATTGTC 59.749 55.000 5.01 9.88 42.03 3.18
194 195 2.979130 GACGAGGCCATTGTCTAGC 58.021 57.895 5.01 0.00 39.03 3.42
196 197 1.681793 GACGAGGCCATTGTCTAGCTA 59.318 52.381 5.01 0.00 39.03 3.32
197 198 1.683917 ACGAGGCCATTGTCTAGCTAG 59.316 52.381 15.01 15.01 0.00 3.42
198 199 1.957177 CGAGGCCATTGTCTAGCTAGA 59.043 52.381 19.72 19.72 0.00 2.43
219 259 8.562052 GCTAGACAGATAGAAGAAGTAGTTACC 58.438 40.741 0.00 0.00 0.00 2.85
224 264 7.339976 ACAGATAGAAGAAGTAGTTACCAGGAC 59.660 40.741 0.00 0.00 0.00 3.85
236 276 2.359602 CAGGACTGCACTGGCTGG 60.360 66.667 0.00 0.00 42.66 4.85
247 289 2.106511 GCACTGGCTGGGATATCCTTTA 59.893 50.000 21.18 7.59 36.96 1.85
253 295 3.570125 GGCTGGGATATCCTTTAAAGTGC 59.430 47.826 21.18 12.57 36.20 4.40
275 317 5.820423 TGCGTTCTTGTAATAATAGCCACAT 59.180 36.000 0.00 0.00 0.00 3.21
309 351 6.206048 CCCTTTTATCGTTATAATGGACACCC 59.794 42.308 4.86 0.00 0.00 4.61
345 388 6.716628 TGTCTCAAAGCACAAGAAGGAATTAT 59.283 34.615 0.00 0.00 0.00 1.28
351 394 7.814264 AAGCACAAGAAGGAATTATATGGAG 57.186 36.000 0.00 0.00 0.00 3.86
368 411 3.130633 TGGAGACAATGTCGTGTTTCAG 58.869 45.455 7.83 0.00 37.67 3.02
385 428 1.066858 TCAGTTCAGAATCGAGCCCAC 60.067 52.381 0.00 0.00 0.00 4.61
405 448 5.714806 CCCACTTACTATGACCACCAAAAAT 59.285 40.000 0.00 0.00 0.00 1.82
407 450 7.067008 CCCACTTACTATGACCACCAAAAATAG 59.933 40.741 0.00 0.00 0.00 1.73
415 458 2.965147 ACCACCAAAAATAGTGCAGCTT 59.035 40.909 0.00 0.00 32.48 3.74
421 464 6.867816 CACCAAAAATAGTGCAGCTTGAAATA 59.132 34.615 0.00 0.00 0.00 1.40
424 467 7.760794 CCAAAAATAGTGCAGCTTGAAATATCA 59.239 33.333 0.00 0.00 0.00 2.15
448 491 8.670135 TCAATCAAGTTTTCTCTTTACAACGAA 58.330 29.630 0.00 0.00 0.00 3.85
450 493 7.367159 TCAAGTTTTCTCTTTACAACGAACA 57.633 32.000 0.00 0.00 0.00 3.18
451 494 7.981142 TCAAGTTTTCTCTTTACAACGAACAT 58.019 30.769 0.00 0.00 0.00 2.71
454 497 7.981142 AGTTTTCTCTTTACAACGAACATCAA 58.019 30.769 0.00 0.00 0.00 2.57
477 520 6.741992 AACATGTTTGTACATCATCACGAT 57.258 33.333 4.92 0.00 43.07 3.73
486 529 7.519032 TGTACATCATCACGATATGTTAGGA 57.481 36.000 0.00 0.00 35.54 2.94
495 538 6.513180 TCACGATATGTTAGGAAGAATGTCC 58.487 40.000 0.00 0.00 38.03 4.02
499 542 6.202954 CGATATGTTAGGAAGAATGTCCCAAC 59.797 42.308 0.00 0.00 39.09 3.77
500 543 4.715534 TGTTAGGAAGAATGTCCCAACA 57.284 40.909 1.75 1.75 44.00 3.33
502 545 5.009631 TGTTAGGAAGAATGTCCCAACATG 58.990 41.667 1.75 0.00 45.48 3.21
503 546 2.450476 AGGAAGAATGTCCCAACATGC 58.550 47.619 0.00 0.00 45.48 4.06
504 547 1.478105 GGAAGAATGTCCCAACATGCC 59.522 52.381 0.00 0.00 45.48 4.40
505 548 2.450476 GAAGAATGTCCCAACATGCCT 58.550 47.619 0.00 0.00 45.48 4.75
506 549 2.610438 AGAATGTCCCAACATGCCTT 57.390 45.000 0.00 0.00 45.48 4.35
507 550 2.893424 AGAATGTCCCAACATGCCTTT 58.107 42.857 0.00 0.00 45.48 3.11
508 551 2.564062 AGAATGTCCCAACATGCCTTTG 59.436 45.455 0.00 0.00 45.48 2.77
509 552 0.609662 ATGTCCCAACATGCCTTTGC 59.390 50.000 0.00 0.00 44.51 3.68
521 564 2.991250 TGCCTTTGCAGATTCTCTACC 58.009 47.619 0.00 0.00 44.23 3.18
522 565 2.293170 GCCTTTGCAGATTCTCTACCC 58.707 52.381 0.00 0.00 37.47 3.69
523 566 2.092699 GCCTTTGCAGATTCTCTACCCT 60.093 50.000 0.00 0.00 37.47 4.34
525 568 3.454082 CCTTTGCAGATTCTCTACCCTCT 59.546 47.826 0.00 0.00 0.00 3.69
527 570 3.388552 TGCAGATTCTCTACCCTCTGA 57.611 47.619 2.75 0.00 37.85 3.27
529 572 2.627699 GCAGATTCTCTACCCTCTGAGG 59.372 54.545 17.02 17.02 37.85 3.86
539 582 1.617839 CCTCTGAGGGGAAGGGCTT 60.618 63.158 16.19 0.00 0.00 4.35
550 593 4.929807 AGGGCTTCCTTGGTGTTG 57.070 55.556 0.00 0.00 37.72 3.33
551 594 1.930520 AGGGCTTCCTTGGTGTTGT 59.069 52.632 0.00 0.00 37.72 3.32
554 597 0.467290 GGCTTCCTTGGTGTTGTCCA 60.467 55.000 0.00 0.00 35.49 4.02
555 598 1.620822 GCTTCCTTGGTGTTGTCCAT 58.379 50.000 0.00 0.00 37.33 3.41
557 600 2.862541 CTTCCTTGGTGTTGTCCATCA 58.137 47.619 0.00 0.00 37.33 3.07
559 602 1.073763 TCCTTGGTGTTGTCCATCAGG 59.926 52.381 0.00 0.00 35.07 3.86
589 1452 0.030235 GTTGTCGGGGCAAACTTCAC 59.970 55.000 0.00 0.00 0.00 3.18
590 1453 0.106918 TTGTCGGGGCAAACTTCACT 60.107 50.000 0.00 0.00 0.00 3.41
613 1476 3.698040 AGAAGCTTTGCATGTCTTATGGG 59.302 43.478 0.00 0.00 0.00 4.00
641 1504 1.081892 GTGTGTAGCACCATGAGCAG 58.918 55.000 11.79 0.00 42.10 4.24
652 1798 2.502947 ACCATGAGCAGCATAGACTTGA 59.497 45.455 0.00 0.00 34.82 3.02
684 1830 2.808543 GTTGTGTAAGAGGAAGCTGTGG 59.191 50.000 0.00 0.00 0.00 4.17
692 1838 2.776536 AGAGGAAGCTGTGGAATATGCT 59.223 45.455 0.00 0.00 37.37 3.79
693 1839 2.877168 GAGGAAGCTGTGGAATATGCTG 59.123 50.000 0.00 0.00 35.79 4.41
694 1840 1.336125 GGAAGCTGTGGAATATGCTGC 59.664 52.381 0.00 0.00 35.79 5.25
695 1841 1.336125 GAAGCTGTGGAATATGCTGCC 59.664 52.381 0.00 0.00 35.79 4.85
697 1843 1.770658 AGCTGTGGAATATGCTGCCTA 59.229 47.619 0.00 0.00 34.19 3.93
698 1844 2.374504 AGCTGTGGAATATGCTGCCTAT 59.625 45.455 0.00 0.00 34.19 2.57
788 2233 2.503331 AGCACGAATTTCACCATGTGA 58.497 42.857 0.00 0.00 41.09 3.58
792 2237 5.357878 AGCACGAATTTCACCATGTGATAAT 59.642 36.000 0.00 0.00 42.40 1.28
875 2321 9.159470 CATACACTCGAAAAGAAAAGAGAAAAC 57.841 33.333 0.00 0.00 34.98 2.43
881 2327 9.211556 CTCGAAAAGAAAAGAGAAAACTAACAC 57.788 33.333 0.00 0.00 32.84 3.32
924 2370 0.250513 GTACCCTCTTGCTCCCACTG 59.749 60.000 0.00 0.00 0.00 3.66
955 2401 7.468084 GCCTATAAAAACCATGCGAATTAGACA 60.468 37.037 0.00 0.00 0.00 3.41
957 2403 9.221775 CTATAAAAACCATGCGAATTAGACAAC 57.778 33.333 0.00 0.00 0.00 3.32
977 2424 0.460284 CATCTACCCCACGCACACTC 60.460 60.000 0.00 0.00 0.00 3.51
1030 2477 0.108186 TACTGCTGCTGGATTCCACG 60.108 55.000 11.29 0.00 0.00 4.94
1049 2496 5.949354 TCCACGTTTTATTTCTCATTCCCAT 59.051 36.000 0.00 0.00 0.00 4.00
1125 2572 8.846423 TCCTCTTATCTAGAAAATCCAGAAGT 57.154 34.615 0.00 0.00 30.91 3.01
1136 2583 1.812922 CCAGAAGTAGCAGCGGCAG 60.813 63.158 12.44 0.00 44.61 4.85
1150 2597 1.133025 GCGGCAGCACAATTAGTGATT 59.867 47.619 3.18 0.00 46.49 2.57
1154 2601 4.512944 CGGCAGCACAATTAGTGATTCTAT 59.487 41.667 10.87 0.00 46.49 1.98
1170 2620 4.437682 TTCTATTTTCCATGGCGGATCT 57.562 40.909 6.96 0.00 45.80 2.75
1214 2664 1.553248 CCGAACAGATGAGTACCCCAA 59.447 52.381 0.00 0.00 0.00 4.12
1249 2702 3.682292 AAGGCGGCCGACAAGATCC 62.682 63.158 36.60 20.93 0.00 3.36
1253 2706 3.782443 GGCCGACAAGATCCCGGT 61.782 66.667 0.00 0.00 44.63 5.28
1302 2755 2.484062 CGACCAGTACGCCGGGTAT 61.484 63.158 2.18 0.00 34.39 2.73
1413 2888 2.688958 GCTCAACGGAGGTGAGTAGTAT 59.311 50.000 15.42 0.00 41.67 2.12
1423 2898 4.640364 AGGTGAGTAGTATCTAGTACCGC 58.360 47.826 0.00 0.00 33.58 5.68
1426 2901 4.451774 GTGAGTAGTATCTAGTACCGCTGG 59.548 50.000 0.00 0.00 33.58 4.85
1717 3301 9.981114 CCAAACTTTGATCCAACTTATTTTACT 57.019 29.630 2.87 0.00 0.00 2.24
1839 3432 6.095440 TCTCTATAAATTTGGCCAGAGTTTGC 59.905 38.462 14.60 0.00 33.02 3.68
1937 3545 2.170817 GGGATTCTCCTACTCCAACACC 59.829 54.545 0.00 0.00 36.57 4.16
2017 3625 0.601558 GTCAACTGGCTCGACAGGTA 59.398 55.000 4.57 0.00 42.75 3.08
2054 3662 4.078516 GGCCTCTACAACGCCGGT 62.079 66.667 1.90 0.00 31.92 5.28
2301 3933 1.270305 CCTCCTATGGTGGTATGTGCG 60.270 57.143 0.00 0.00 32.24 5.34
2322 3954 6.423905 GTGCGATGAAGCTATTAGTAAATCCA 59.576 38.462 0.00 0.00 38.13 3.41
2426 4198 5.183228 AGCAGCCAAGTACGTACAAATATT 58.817 37.500 26.55 9.69 0.00 1.28
2460 4232 6.012658 AGAGACATTCTGATAGATCGAAGC 57.987 41.667 0.00 0.00 33.93 3.86
2461 4233 5.769662 AGAGACATTCTGATAGATCGAAGCT 59.230 40.000 0.00 0.00 33.93 3.74
2463 4235 4.305769 ACATTCTGATAGATCGAAGCTGC 58.694 43.478 0.00 0.00 0.00 5.25
2464 4236 4.202192 ACATTCTGATAGATCGAAGCTGCA 60.202 41.667 1.02 0.00 0.00 4.41
2466 4238 4.597404 TCTGATAGATCGAAGCTGCATT 57.403 40.909 1.02 0.00 0.00 3.56
2470 4242 6.029346 TGATAGATCGAAGCTGCATTATCA 57.971 37.500 1.02 0.00 0.00 2.15
2472 4244 7.101700 TGATAGATCGAAGCTGCATTATCATT 58.898 34.615 1.02 0.00 0.00 2.57
2482 4254 4.112716 TGCATTATCATTGCAAGTGGTG 57.887 40.909 4.94 0.00 46.48 4.17
2494 4266 4.431809 TGCAAGTGGTGTGAAATTTCTTG 58.568 39.130 18.64 13.11 35.43 3.02
2495 4267 3.803778 GCAAGTGGTGTGAAATTTCTTGG 59.196 43.478 18.64 0.90 33.71 3.61
2498 4270 3.891366 AGTGGTGTGAAATTTCTTGGGAG 59.109 43.478 18.64 0.00 0.00 4.30
2499 4271 3.888930 GTGGTGTGAAATTTCTTGGGAGA 59.111 43.478 18.64 0.00 0.00 3.71
2548 4377 2.047274 ATCCGTGCGGTGAAGTGG 60.047 61.111 10.60 0.00 36.47 4.00
2625 4454 1.216178 GAAATGGCGTGGCTGCAAT 59.784 52.632 0.50 0.00 36.28 3.56
2678 4507 9.717892 ATGAAATGAGCTATATATACGTGTACG 57.282 33.333 0.00 2.43 46.33 3.67
2684 4513 9.480053 TGAGCTATATATACGTGTACGCATATA 57.520 33.333 15.69 15.69 41.78 0.86
2721 4583 4.878971 TCTTGTTCGATTTCTTGTTGGTGA 59.121 37.500 0.00 0.00 0.00 4.02
2751 4701 1.344065 TAGGTTTCAAGGACTCGCCA 58.656 50.000 0.00 0.00 40.02 5.69
2756 4706 3.190874 GTTTCAAGGACTCGCCAGATAG 58.809 50.000 0.00 0.00 40.02 2.08
2763 4713 1.613925 GACTCGCCAGATAGCATGGTA 59.386 52.381 7.15 7.15 40.17 3.25
2823 4773 3.737559 TGGCTGTTCAGGTAATCCAAT 57.262 42.857 1.97 0.00 35.89 3.16
2950 4903 1.755783 GAGGTACACGGTCCGGGAT 60.756 63.158 23.23 7.21 32.98 3.85
2956 4909 1.189524 ACACGGTCCGGGATCTCAAA 61.190 55.000 23.23 0.00 32.98 2.69
2963 4916 0.613260 CCGGGATCTCAAACTGTCCA 59.387 55.000 0.00 0.00 32.31 4.02
3002 4956 2.288152 CGCAAGGCCTATTGTTTGTTGT 60.288 45.455 5.16 0.00 32.56 3.32
3003 4957 3.727726 GCAAGGCCTATTGTTTGTTGTT 58.272 40.909 5.16 0.00 32.56 2.83
3004 4958 3.494251 GCAAGGCCTATTGTTTGTTGTTG 59.506 43.478 5.16 0.00 32.56 3.33
3016 4970 1.039068 TGTTGTTGGTGCCATTGAGG 58.961 50.000 0.00 0.00 41.84 3.86
3028 4982 0.324943 CATTGAGGTCGACCCAAGGT 59.675 55.000 30.82 16.34 39.44 3.50
3030 4984 1.052124 TTGAGGTCGACCCAAGGTGT 61.052 55.000 30.82 10.74 35.25 4.16
3075 5029 4.379243 ACGGCAAGACGAGCTGGG 62.379 66.667 0.66 0.00 42.62 4.45
3099 5054 0.993746 CAGCTCGCGCTTTGTTTGAC 60.994 55.000 5.56 0.00 46.47 3.18
3116 5071 0.321919 GACTGTTGGCTGGATGCTCA 60.322 55.000 0.00 0.00 42.39 4.26
3148 5103 3.066760 CAGATGATGTGATTGCTGCATGT 59.933 43.478 1.84 0.00 0.00 3.21
3169 5124 6.007936 TGTTGATATTGTTGTGTACTTGGC 57.992 37.500 0.00 0.00 0.00 4.52
3173 5128 1.686355 TTGTTGTGTACTTGGCCTGG 58.314 50.000 3.32 0.00 0.00 4.45
3174 5129 0.840617 TGTTGTGTACTTGGCCTGGA 59.159 50.000 3.32 0.00 0.00 3.86
3189 5144 1.821136 CCTGGATGTTGCTTTCCTTCC 59.179 52.381 0.00 0.00 32.95 3.46
3203 5158 1.066858 TCCTTCCGAACTAGCTTGCTG 60.067 52.381 5.26 0.00 0.00 4.41
3212 5167 0.877071 CTAGCTTGCTGGGTGTGTTG 59.123 55.000 5.26 0.00 0.00 3.33
3230 5185 1.271856 TGCTTTGGTAGGACGGATGA 58.728 50.000 0.00 0.00 0.00 2.92
3231 5186 1.207089 TGCTTTGGTAGGACGGATGAG 59.793 52.381 0.00 0.00 0.00 2.90
3250 5205 6.771749 GGATGAGTTGGAGTAGTAAGTAGCTA 59.228 42.308 0.00 0.00 0.00 3.32
3251 5206 7.040961 GGATGAGTTGGAGTAGTAAGTAGCTAG 60.041 44.444 0.00 0.00 0.00 3.42
3252 5207 5.589452 TGAGTTGGAGTAGTAAGTAGCTAGC 59.411 44.000 6.62 6.62 0.00 3.42
3253 5208 5.757988 AGTTGGAGTAGTAAGTAGCTAGCT 58.242 41.667 23.12 23.12 0.00 3.32
3276 5231 7.728083 AGCTAGCTCTTAGAGATGAAAATCCTA 59.272 37.037 12.68 0.91 28.73 2.94
3382 5352 7.044181 TGTTATGAACCTCAAATCTCTAGCTG 58.956 38.462 0.00 0.00 0.00 4.24
3414 5384 2.113860 TGCTGCCGAAATTTCTAGCT 57.886 45.000 25.58 0.00 31.81 3.32
3415 5385 1.739466 TGCTGCCGAAATTTCTAGCTG 59.261 47.619 25.58 23.81 31.81 4.24
3429 5399 3.728845 TCTAGCTGAAATTATGGCGACC 58.271 45.455 0.00 0.00 0.00 4.79
3494 5464 3.428725 GGTTGTTCACTGCACAATGTTGA 60.429 43.478 0.00 0.00 36.54 3.18
3527 5497 6.718522 TGTAAGGAAACAAAACCTTTAGGG 57.281 37.500 0.00 0.00 42.93 3.53
3528 5498 6.668718 TTGTAAGGAAACAAAACCTTTAGGGT 59.331 34.615 0.00 0.00 42.93 4.34
3529 5499 7.363968 TTGTAAGGAAACAAAACCTTTAGGGTG 60.364 37.037 0.00 0.00 42.93 4.61
3540 5510 4.004196 CCTTTAGGGTGTTCTTTCGAGT 57.996 45.455 0.00 0.00 0.00 4.18
3541 5511 3.995048 CCTTTAGGGTGTTCTTTCGAGTC 59.005 47.826 0.00 0.00 0.00 3.36
3542 5512 4.262506 CCTTTAGGGTGTTCTTTCGAGTCT 60.263 45.833 0.00 0.00 0.00 3.24
3543 5513 4.950205 TTAGGGTGTTCTTTCGAGTCTT 57.050 40.909 0.00 0.00 0.00 3.01
3544 5514 3.840124 AGGGTGTTCTTTCGAGTCTTT 57.160 42.857 0.00 0.00 0.00 2.52
3545 5515 4.152284 AGGGTGTTCTTTCGAGTCTTTT 57.848 40.909 0.00 0.00 0.00 2.27
3546 5516 4.127907 AGGGTGTTCTTTCGAGTCTTTTC 58.872 43.478 0.00 0.00 0.00 2.29
3547 5517 3.875134 GGGTGTTCTTTCGAGTCTTTTCA 59.125 43.478 0.00 0.00 0.00 2.69
3548 5518 4.334481 GGGTGTTCTTTCGAGTCTTTTCAA 59.666 41.667 0.00 0.00 0.00 2.69
3549 5519 5.502606 GGTGTTCTTTCGAGTCTTTTCAAG 58.497 41.667 0.00 0.00 0.00 3.02
3550 5520 5.064834 GGTGTTCTTTCGAGTCTTTTCAAGT 59.935 40.000 0.00 0.00 0.00 3.16
3551 5521 6.403309 GGTGTTCTTTCGAGTCTTTTCAAGTT 60.403 38.462 0.00 0.00 0.00 2.66
3552 5522 6.683286 GTGTTCTTTCGAGTCTTTTCAAGTTC 59.317 38.462 0.00 0.00 0.00 3.01
3553 5523 5.986004 TCTTTCGAGTCTTTTCAAGTTCC 57.014 39.130 0.00 0.00 0.00 3.62
3554 5524 5.424757 TCTTTCGAGTCTTTTCAAGTTCCA 58.575 37.500 0.00 0.00 0.00 3.53
3555 5525 5.878116 TCTTTCGAGTCTTTTCAAGTTCCAA 59.122 36.000 0.00 0.00 0.00 3.53
3556 5526 5.479716 TTCGAGTCTTTTCAAGTTCCAAC 57.520 39.130 0.00 0.00 0.00 3.77
3557 5527 4.766375 TCGAGTCTTTTCAAGTTCCAACT 58.234 39.130 0.00 0.00 42.04 3.16
3558 5528 4.570772 TCGAGTCTTTTCAAGTTCCAACTG 59.429 41.667 0.00 0.00 39.66 3.16
3559 5529 4.570772 CGAGTCTTTTCAAGTTCCAACTGA 59.429 41.667 0.00 0.00 39.66 3.41
3560 5530 5.237344 CGAGTCTTTTCAAGTTCCAACTGAT 59.763 40.000 0.00 0.00 39.66 2.90
3561 5531 6.238484 CGAGTCTTTTCAAGTTCCAACTGATT 60.238 38.462 0.00 0.00 39.66 2.57
3562 5532 7.032377 AGTCTTTTCAAGTTCCAACTGATTC 57.968 36.000 0.00 0.00 39.66 2.52
3563 5533 6.603201 AGTCTTTTCAAGTTCCAACTGATTCA 59.397 34.615 0.00 0.00 39.66 2.57
3564 5534 7.122650 AGTCTTTTCAAGTTCCAACTGATTCAA 59.877 33.333 0.00 0.00 39.66 2.69
3565 5535 7.759433 GTCTTTTCAAGTTCCAACTGATTCAAA 59.241 33.333 0.00 0.00 39.66 2.69
3566 5536 7.759433 TCTTTTCAAGTTCCAACTGATTCAAAC 59.241 33.333 0.00 0.00 39.66 2.93
3567 5537 6.522625 TTCAAGTTCCAACTGATTCAAACA 57.477 33.333 0.00 0.00 39.66 2.83
3568 5538 6.522625 TCAAGTTCCAACTGATTCAAACAA 57.477 33.333 0.00 0.00 39.66 2.83
3569 5539 6.329496 TCAAGTTCCAACTGATTCAAACAAC 58.671 36.000 0.00 0.00 39.66 3.32
3570 5540 5.913137 AGTTCCAACTGATTCAAACAACA 57.087 34.783 0.00 0.00 37.98 3.33
3571 5541 5.650543 AGTTCCAACTGATTCAAACAACAC 58.349 37.500 0.00 0.00 37.98 3.32
3572 5542 4.285807 TCCAACTGATTCAAACAACACG 57.714 40.909 0.00 0.00 0.00 4.49
3573 5543 3.066064 TCCAACTGATTCAAACAACACGG 59.934 43.478 0.00 0.00 0.00 4.94
3574 5544 3.371168 CAACTGATTCAAACAACACGGG 58.629 45.455 0.00 0.00 0.00 5.28
3575 5545 1.336755 ACTGATTCAAACAACACGGGC 59.663 47.619 0.00 0.00 0.00 6.13
3576 5546 1.336440 CTGATTCAAACAACACGGGCA 59.664 47.619 0.00 0.00 0.00 5.36
3577 5547 1.959985 TGATTCAAACAACACGGGCAT 59.040 42.857 0.00 0.00 0.00 4.40
3578 5548 2.363680 TGATTCAAACAACACGGGCATT 59.636 40.909 0.00 0.00 0.00 3.56
3579 5549 2.969628 TTCAAACAACACGGGCATTT 57.030 40.000 0.00 0.00 0.00 2.32
3580 5550 4.038042 TGATTCAAACAACACGGGCATTTA 59.962 37.500 0.00 0.00 0.00 1.40
3581 5551 4.592485 TTCAAACAACACGGGCATTTAT 57.408 36.364 0.00 0.00 0.00 1.40
3582 5552 4.592485 TCAAACAACACGGGCATTTATT 57.408 36.364 0.00 0.00 0.00 1.40
3583 5553 4.950050 TCAAACAACACGGGCATTTATTT 58.050 34.783 0.00 0.00 0.00 1.40
3584 5554 4.747108 TCAAACAACACGGGCATTTATTTG 59.253 37.500 0.00 0.00 0.00 2.32
3585 5555 4.592485 AACAACACGGGCATTTATTTGA 57.408 36.364 0.00 0.00 0.00 2.69
3586 5556 4.592485 ACAACACGGGCATTTATTTGAA 57.408 36.364 0.00 0.00 0.00 2.69
3587 5557 4.950050 ACAACACGGGCATTTATTTGAAA 58.050 34.783 0.00 0.00 0.00 2.69
3588 5558 5.360591 ACAACACGGGCATTTATTTGAAAA 58.639 33.333 0.00 0.00 0.00 2.29
3589 5559 5.994668 ACAACACGGGCATTTATTTGAAAAT 59.005 32.000 0.00 0.00 0.00 1.82
3590 5560 6.484977 ACAACACGGGCATTTATTTGAAAATT 59.515 30.769 0.00 0.00 0.00 1.82
3591 5561 7.012799 ACAACACGGGCATTTATTTGAAAATTT 59.987 29.630 0.00 0.00 0.00 1.82
3592 5562 7.503521 ACACGGGCATTTATTTGAAAATTTT 57.496 28.000 2.28 2.28 0.00 1.82
3593 5563 7.580600 ACACGGGCATTTATTTGAAAATTTTC 58.419 30.769 21.60 21.60 37.69 2.29
3594 5564 7.227512 ACACGGGCATTTATTTGAAAATTTTCA 59.772 29.630 26.01 26.01 44.78 2.69
3595 5565 8.235905 CACGGGCATTTATTTGAAAATTTTCAT 58.764 29.630 29.13 19.72 45.65 2.57
3596 5566 8.450180 ACGGGCATTTATTTGAAAATTTTCATC 58.550 29.630 29.13 7.82 45.65 2.92
3597 5567 8.449397 CGGGCATTTATTTGAAAATTTTCATCA 58.551 29.630 29.13 20.58 45.65 3.07
3609 5579 9.478238 TGAAAATTTTCATCATCCCTATCTTGA 57.522 29.630 26.01 1.20 41.88 3.02
3614 5584 9.878737 ATTTTCATCATCCCTATCTTGAATTCT 57.121 29.630 7.05 0.00 0.00 2.40
3615 5585 9.705103 TTTTCATCATCCCTATCTTGAATTCTT 57.295 29.630 7.05 0.00 0.00 2.52
3616 5586 8.687292 TTCATCATCCCTATCTTGAATTCTTG 57.313 34.615 7.05 0.00 0.00 3.02
3617 5587 7.809238 TCATCATCCCTATCTTGAATTCTTGT 58.191 34.615 7.05 0.00 0.00 3.16
3618 5588 8.277197 TCATCATCCCTATCTTGAATTCTTGTT 58.723 33.333 7.05 0.00 0.00 2.83
3619 5589 7.870509 TCATCCCTATCTTGAATTCTTGTTG 57.129 36.000 7.05 0.00 0.00 3.33
3620 5590 7.405292 TCATCCCTATCTTGAATTCTTGTTGT 58.595 34.615 7.05 0.00 0.00 3.32
3621 5591 7.890127 TCATCCCTATCTTGAATTCTTGTTGTT 59.110 33.333 7.05 0.00 0.00 2.83
3622 5592 8.526147 CATCCCTATCTTGAATTCTTGTTGTTT 58.474 33.333 7.05 0.00 0.00 2.83
3623 5593 8.110860 TCCCTATCTTGAATTCTTGTTGTTTC 57.889 34.615 7.05 0.00 0.00 2.78
3624 5594 7.723616 TCCCTATCTTGAATTCTTGTTGTTTCA 59.276 33.333 7.05 0.00 0.00 2.69
3625 5595 8.526147 CCCTATCTTGAATTCTTGTTGTTTCAT 58.474 33.333 7.05 0.00 0.00 2.57
3626 5596 9.565213 CCTATCTTGAATTCTTGTTGTTTCATC 57.435 33.333 7.05 0.00 0.00 2.92
3629 5599 8.861033 TCTTGAATTCTTGTTGTTTCATCTTG 57.139 30.769 7.05 0.00 0.00 3.02
3630 5600 8.685427 TCTTGAATTCTTGTTGTTTCATCTTGA 58.315 29.630 7.05 0.00 0.00 3.02
3631 5601 9.472361 CTTGAATTCTTGTTGTTTCATCTTGAT 57.528 29.630 7.05 0.00 0.00 2.57
3632 5602 9.467258 TTGAATTCTTGTTGTTTCATCTTGATC 57.533 29.630 7.05 0.00 0.00 2.92
3633 5603 8.084073 TGAATTCTTGTTGTTTCATCTTGATCC 58.916 33.333 7.05 0.00 0.00 3.36
3634 5604 6.957920 TTCTTGTTGTTTCATCTTGATCCA 57.042 33.333 0.00 0.00 0.00 3.41
3635 5605 6.564709 TCTTGTTGTTTCATCTTGATCCAG 57.435 37.500 0.00 0.00 0.00 3.86
3636 5606 6.064060 TCTTGTTGTTTCATCTTGATCCAGT 58.936 36.000 0.00 0.00 0.00 4.00
3637 5607 5.694231 TGTTGTTTCATCTTGATCCAGTG 57.306 39.130 0.00 0.00 0.00 3.66
3638 5608 5.132502 TGTTGTTTCATCTTGATCCAGTGT 58.867 37.500 0.00 0.00 0.00 3.55
3639 5609 5.239306 TGTTGTTTCATCTTGATCCAGTGTC 59.761 40.000 0.00 0.00 0.00 3.67
3640 5610 4.971939 TGTTTCATCTTGATCCAGTGTCA 58.028 39.130 0.00 0.00 0.00 3.58
3641 5611 4.999311 TGTTTCATCTTGATCCAGTGTCAG 59.001 41.667 0.00 0.00 0.00 3.51
3642 5612 4.897509 TTCATCTTGATCCAGTGTCAGT 57.102 40.909 0.00 0.00 0.00 3.41
3643 5613 4.462508 TCATCTTGATCCAGTGTCAGTC 57.537 45.455 0.00 0.00 0.00 3.51
3644 5614 4.092279 TCATCTTGATCCAGTGTCAGTCT 58.908 43.478 0.00 0.00 0.00 3.24
3645 5615 3.949842 TCTTGATCCAGTGTCAGTCTG 57.050 47.619 0.00 0.00 0.00 3.51
3646 5616 3.500343 TCTTGATCCAGTGTCAGTCTGA 58.500 45.455 0.00 0.00 35.20 3.27
3647 5617 3.897505 TCTTGATCCAGTGTCAGTCTGAA 59.102 43.478 3.51 0.00 35.20 3.02
3648 5618 4.344968 TCTTGATCCAGTGTCAGTCTGAAA 59.655 41.667 3.51 0.00 35.20 2.69
3649 5619 3.995199 TGATCCAGTGTCAGTCTGAAAC 58.005 45.455 14.51 14.51 34.83 2.78
3650 5620 3.387699 TGATCCAGTGTCAGTCTGAAACA 59.612 43.478 22.59 7.97 37.07 2.83
3651 5621 4.040829 TGATCCAGTGTCAGTCTGAAACAT 59.959 41.667 22.59 9.53 37.07 2.71
3652 5622 3.995199 TCCAGTGTCAGTCTGAAACATC 58.005 45.455 22.59 3.49 37.07 3.06
3653 5623 3.643320 TCCAGTGTCAGTCTGAAACATCT 59.357 43.478 22.59 2.13 37.07 2.90
3654 5624 4.832823 TCCAGTGTCAGTCTGAAACATCTA 59.167 41.667 22.59 5.01 37.07 1.98
3655 5625 5.304357 TCCAGTGTCAGTCTGAAACATCTAA 59.696 40.000 22.59 3.47 37.07 2.10
3656 5626 6.014242 TCCAGTGTCAGTCTGAAACATCTAAT 60.014 38.462 22.59 0.75 37.07 1.73
3657 5627 6.652481 CCAGTGTCAGTCTGAAACATCTAATT 59.348 38.462 22.59 0.07 37.07 1.40
3658 5628 7.819415 CCAGTGTCAGTCTGAAACATCTAATTA 59.181 37.037 22.59 0.00 37.07 1.40
3659 5629 9.208022 CAGTGTCAGTCTGAAACATCTAATTAA 57.792 33.333 22.59 0.00 37.07 1.40
3660 5630 9.778741 AGTGTCAGTCTGAAACATCTAATTAAA 57.221 29.630 22.59 0.00 37.07 1.52
3665 5635 9.994432 CAGTCTGAAACATCTAATTAAATCACC 57.006 33.333 0.00 0.00 0.00 4.02
3666 5636 8.883731 AGTCTGAAACATCTAATTAAATCACCG 58.116 33.333 0.00 0.00 0.00 4.94
3667 5637 8.122952 GTCTGAAACATCTAATTAAATCACCGG 58.877 37.037 0.00 0.00 0.00 5.28
3668 5638 7.282224 TCTGAAACATCTAATTAAATCACCGGG 59.718 37.037 6.32 0.00 0.00 5.73
3669 5639 6.320164 TGAAACATCTAATTAAATCACCGGGG 59.680 38.462 6.32 0.00 0.00 5.73
3670 5640 5.640158 ACATCTAATTAAATCACCGGGGA 57.360 39.130 9.99 9.99 0.00 4.81
3671 5641 5.621193 ACATCTAATTAAATCACCGGGGAG 58.379 41.667 14.24 0.00 0.00 4.30
3672 5642 5.368523 ACATCTAATTAAATCACCGGGGAGA 59.631 40.000 14.24 3.94 0.00 3.71
3673 5643 5.546621 TCTAATTAAATCACCGGGGAGAG 57.453 43.478 14.24 0.44 0.00 3.20
3674 5644 2.640316 ATTAAATCACCGGGGAGAGC 57.360 50.000 14.24 0.00 0.00 4.09
3675 5645 1.580059 TTAAATCACCGGGGAGAGCT 58.420 50.000 14.24 0.00 0.00 4.09
3676 5646 2.464796 TAAATCACCGGGGAGAGCTA 57.535 50.000 14.24 0.00 0.00 3.32
3677 5647 0.831307 AAATCACCGGGGAGAGCTAC 59.169 55.000 14.24 0.00 0.00 3.58
3678 5648 1.392710 AATCACCGGGGAGAGCTACG 61.393 60.000 14.24 0.00 0.00 3.51
3679 5649 4.208686 CACCGGGGAGAGCTACGC 62.209 72.222 6.32 0.00 0.00 4.42
3684 5654 3.902086 GGGAGAGCTACGCCGGTC 61.902 72.222 1.90 0.00 39.38 4.79
3685 5655 3.138798 GGAGAGCTACGCCGGTCA 61.139 66.667 1.90 0.00 34.00 4.02
3686 5656 2.102553 GAGAGCTACGCCGGTCAC 59.897 66.667 1.90 0.00 34.00 3.67
3687 5657 2.361357 AGAGCTACGCCGGTCACT 60.361 61.111 1.90 0.00 34.00 3.41
3688 5658 1.077930 AGAGCTACGCCGGTCACTA 60.078 57.895 1.90 0.00 34.00 2.74
3689 5659 1.063811 GAGCTACGCCGGTCACTAC 59.936 63.158 1.90 0.00 0.00 2.73
3690 5660 1.651240 GAGCTACGCCGGTCACTACA 61.651 60.000 1.90 0.00 0.00 2.74
3691 5661 1.035932 AGCTACGCCGGTCACTACAT 61.036 55.000 1.90 0.00 0.00 2.29
3692 5662 0.594284 GCTACGCCGGTCACTACATC 60.594 60.000 1.90 0.00 0.00 3.06
3693 5663 0.030369 CTACGCCGGTCACTACATCC 59.970 60.000 1.90 0.00 0.00 3.51
3694 5664 1.386525 TACGCCGGTCACTACATCCC 61.387 60.000 1.90 0.00 0.00 3.85
3695 5665 2.504519 GCCGGTCACTACATCCCC 59.495 66.667 1.90 0.00 0.00 4.81
3696 5666 3.103091 GCCGGTCACTACATCCCCC 62.103 68.421 1.90 0.00 0.00 5.40
3697 5667 1.687840 CCGGTCACTACATCCCCCA 60.688 63.158 0.00 0.00 0.00 4.96
3698 5668 1.268992 CCGGTCACTACATCCCCCAA 61.269 60.000 0.00 0.00 0.00 4.12
3699 5669 0.107848 CGGTCACTACATCCCCCAAC 60.108 60.000 0.00 0.00 0.00 3.77
3700 5670 1.286248 GGTCACTACATCCCCCAACT 58.714 55.000 0.00 0.00 0.00 3.16
3701 5671 1.209747 GGTCACTACATCCCCCAACTC 59.790 57.143 0.00 0.00 0.00 3.01
3702 5672 1.134788 GTCACTACATCCCCCAACTCG 60.135 57.143 0.00 0.00 0.00 4.18
3703 5673 0.462047 CACTACATCCCCCAACTCGC 60.462 60.000 0.00 0.00 0.00 5.03
3704 5674 1.146263 CTACATCCCCCAACTCGCC 59.854 63.158 0.00 0.00 0.00 5.54
3705 5675 2.644555 CTACATCCCCCAACTCGCCG 62.645 65.000 0.00 0.00 0.00 6.46
3713 5683 3.499737 CAACTCGCCGCCACCATC 61.500 66.667 0.00 0.00 0.00 3.51
3714 5684 3.706373 AACTCGCCGCCACCATCT 61.706 61.111 0.00 0.00 0.00 2.90
3715 5685 3.254024 AACTCGCCGCCACCATCTT 62.254 57.895 0.00 0.00 0.00 2.40
3716 5686 1.895020 AACTCGCCGCCACCATCTTA 61.895 55.000 0.00 0.00 0.00 2.10
3717 5687 1.592669 CTCGCCGCCACCATCTTAG 60.593 63.158 0.00 0.00 0.00 2.18
3718 5688 3.272334 CGCCGCCACCATCTTAGC 61.272 66.667 0.00 0.00 0.00 3.09
3719 5689 2.124736 GCCGCCACCATCTTAGCA 60.125 61.111 0.00 0.00 0.00 3.49
3720 5690 2.472909 GCCGCCACCATCTTAGCAC 61.473 63.158 0.00 0.00 0.00 4.40
3721 5691 1.078497 CCGCCACCATCTTAGCACA 60.078 57.895 0.00 0.00 0.00 4.57
3722 5692 1.369091 CCGCCACCATCTTAGCACAC 61.369 60.000 0.00 0.00 0.00 3.82
3723 5693 0.673333 CGCCACCATCTTAGCACACA 60.673 55.000 0.00 0.00 0.00 3.72
3724 5694 1.533625 GCCACCATCTTAGCACACAA 58.466 50.000 0.00 0.00 0.00 3.33
3725 5695 1.200020 GCCACCATCTTAGCACACAAC 59.800 52.381 0.00 0.00 0.00 3.32
3726 5696 2.503331 CCACCATCTTAGCACACAACA 58.497 47.619 0.00 0.00 0.00 3.33
3727 5697 2.485426 CCACCATCTTAGCACACAACAG 59.515 50.000 0.00 0.00 0.00 3.16
3728 5698 2.095567 CACCATCTTAGCACACAACAGC 60.096 50.000 0.00 0.00 0.00 4.40
3729 5699 2.153645 CCATCTTAGCACACAACAGCA 58.846 47.619 0.00 0.00 0.00 4.41
3730 5700 2.553602 CCATCTTAGCACACAACAGCAA 59.446 45.455 0.00 0.00 0.00 3.91
3731 5701 3.192001 CCATCTTAGCACACAACAGCAAT 59.808 43.478 0.00 0.00 0.00 3.56
3751 5721 1.054406 GTAGGGGGCTATGTCCAGCA 61.054 60.000 0.00 0.00 43.67 4.41
3878 5851 1.985622 TCCTCCCTCCATTCACCAAT 58.014 50.000 0.00 0.00 0.00 3.16
3893 5866 6.452494 TTCACCAATGAGTACTAGCTAGTC 57.548 41.667 29.28 19.61 35.51 2.59
3894 5867 5.756918 TCACCAATGAGTACTAGCTAGTCT 58.243 41.667 29.28 23.47 37.73 3.24
3895 5868 6.188407 TCACCAATGAGTACTAGCTAGTCTT 58.812 40.000 29.28 18.34 37.73 3.01
3896 5869 6.663953 TCACCAATGAGTACTAGCTAGTCTTT 59.336 38.462 29.28 15.87 37.73 2.52
3897 5870 6.975772 CACCAATGAGTACTAGCTAGTCTTTC 59.024 42.308 29.28 22.59 37.73 2.62
3898 5871 6.893005 ACCAATGAGTACTAGCTAGTCTTTCT 59.107 38.462 29.28 21.05 37.73 2.52
3899 5872 7.147983 ACCAATGAGTACTAGCTAGTCTTTCTG 60.148 40.741 29.28 18.67 37.73 3.02
3900 5873 7.147983 CCAATGAGTACTAGCTAGTCTTTCTGT 60.148 40.741 29.28 14.33 37.73 3.41
3901 5874 7.948034 ATGAGTACTAGCTAGTCTTTCTGTT 57.052 36.000 29.28 11.52 37.73 3.16
3902 5875 7.762588 TGAGTACTAGCTAGTCTTTCTGTTT 57.237 36.000 29.28 4.08 37.73 2.83
3903 5876 7.594714 TGAGTACTAGCTAGTCTTTCTGTTTG 58.405 38.462 29.28 0.00 37.73 2.93
3904 5877 7.230913 TGAGTACTAGCTAGTCTTTCTGTTTGT 59.769 37.037 29.28 4.22 37.73 2.83
3905 5878 7.371936 AGTACTAGCTAGTCTTTCTGTTTGTG 58.628 38.462 29.28 0.00 37.73 3.33
3906 5879 4.991687 ACTAGCTAGTCTTTCTGTTTGTGC 59.008 41.667 20.95 0.00 0.00 4.57
3924 5897 5.637006 TGTGCTTTTGTTTCTGTTGTACT 57.363 34.783 0.00 0.00 0.00 2.73
3946 5919 2.163613 CCCTCCGTTCCAAAATACTTGC 59.836 50.000 0.00 0.00 0.00 4.01
3951 5924 2.667171 CGTTCCAAAATACTTGCCGTGG 60.667 50.000 0.00 0.00 0.00 4.94
3954 5927 2.294791 TCCAAAATACTTGCCGTGGTTG 59.705 45.455 0.00 0.00 0.00 3.77
3984 5969 4.134563 ACCATGACAAGTTCTGTTGTACC 58.865 43.478 0.00 0.00 40.83 3.34
4007 5992 4.142708 CGTAGCTAGCAGTGATCTATCCAG 60.143 50.000 18.83 0.00 0.00 3.86
4077 6062 6.970043 TCGTGTTCATTTCAAGTTTAAACAGG 59.030 34.615 20.06 11.31 34.25 4.00
4080 6065 7.222031 GTGTTCATTTCAAGTTTAAACAGGGAC 59.778 37.037 20.06 6.45 0.00 4.46
4087 6072 6.626302 TCAAGTTTAAACAGGGACAAAACAG 58.374 36.000 20.06 0.00 33.52 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.254050 CCGCAATAAAAATTGATGTACACCATG 60.254 37.037 0.00 0.00 32.56 3.66
1 2 6.756074 CCGCAATAAAAATTGATGTACACCAT 59.244 34.615 0.00 0.00 36.13 3.55
2 3 6.096036 CCGCAATAAAAATTGATGTACACCA 58.904 36.000 0.00 0.00 33.55 4.17
14 15 9.868277 TCAGATCAAAATAACCGCAATAAAAAT 57.132 25.926 0.00 0.00 0.00 1.82
21 22 6.567687 TTTCTCAGATCAAAATAACCGCAA 57.432 33.333 0.00 0.00 0.00 4.85
24 25 9.869844 GTGATATTTCTCAGATCAAAATAACCG 57.130 33.333 0.00 0.00 31.62 4.44
61 62 9.072294 GCCAATACAATTACTCAATACAAACAC 57.928 33.333 0.00 0.00 0.00 3.32
115 116 9.739276 TCCAAACTCTGAGTATATGAAAAATGT 57.261 29.630 11.30 0.00 0.00 2.71
146 147 9.788889 TTCTACCGAGTTCTATTCAGATACATA 57.211 33.333 0.00 0.00 0.00 2.29
147 148 8.693120 TTCTACCGAGTTCTATTCAGATACAT 57.307 34.615 0.00 0.00 0.00 2.29
160 161 2.352342 CTCGTCTCCTTCTACCGAGTTC 59.648 54.545 0.00 0.00 39.96 3.01
165 166 1.726533 GGCCTCGTCTCCTTCTACCG 61.727 65.000 0.00 0.00 0.00 4.02
169 170 0.539051 CAATGGCCTCGTCTCCTTCT 59.461 55.000 3.32 0.00 0.00 2.85
177 178 1.683917 CTAGCTAGACAATGGCCTCGT 59.316 52.381 16.15 0.00 35.62 4.18
190 191 9.555727 AACTACTTCTTCTATCTGTCTAGCTAG 57.444 37.037 15.01 15.01 0.00 3.42
192 193 9.333724 GTAACTACTTCTTCTATCTGTCTAGCT 57.666 37.037 0.00 0.00 0.00 3.32
193 194 8.562052 GGTAACTACTTCTTCTATCTGTCTAGC 58.438 40.741 0.00 0.00 0.00 3.42
194 195 9.616156 TGGTAACTACTTCTTCTATCTGTCTAG 57.384 37.037 0.00 0.00 37.61 2.43
196 197 7.558444 CCTGGTAACTACTTCTTCTATCTGTCT 59.442 40.741 0.00 0.00 37.61 3.41
197 198 7.556996 TCCTGGTAACTACTTCTTCTATCTGTC 59.443 40.741 0.00 0.00 37.61 3.51
198 199 7.339976 GTCCTGGTAACTACTTCTTCTATCTGT 59.660 40.741 0.00 0.00 37.61 3.41
199 200 7.558444 AGTCCTGGTAACTACTTCTTCTATCTG 59.442 40.741 0.00 0.00 37.61 2.90
214 254 3.233355 CCAGTGCAGTCCTGGTAAC 57.767 57.895 12.60 0.00 43.73 2.50
219 259 2.359602 CCAGCCAGTGCAGTCCTG 60.360 66.667 10.45 10.45 41.13 3.86
224 264 0.250640 GGATATCCCAGCCAGTGCAG 60.251 60.000 11.02 0.00 41.13 4.41
236 276 6.093633 ACAAGAACGCACTTTAAAGGATATCC 59.906 38.462 19.14 14.41 0.00 2.59
247 289 6.373216 TGGCTATTATTACAAGAACGCACTTT 59.627 34.615 0.00 0.00 0.00 2.66
253 295 7.693952 ACAATGTGGCTATTATTACAAGAACG 58.306 34.615 0.00 0.00 0.00 3.95
329 372 6.767902 TGTCTCCATATAATTCCTTCTTGTGC 59.232 38.462 0.00 0.00 0.00 4.57
330 373 8.737168 TTGTCTCCATATAATTCCTTCTTGTG 57.263 34.615 0.00 0.00 0.00 3.33
331 374 9.347240 CATTGTCTCCATATAATTCCTTCTTGT 57.653 33.333 0.00 0.00 0.00 3.16
345 388 4.888917 TGAAACACGACATTGTCTCCATA 58.111 39.130 14.54 0.00 0.00 2.74
351 394 4.270084 TCTGAACTGAAACACGACATTGTC 59.730 41.667 6.73 6.73 0.00 3.18
368 411 2.100605 AAGTGGGCTCGATTCTGAAC 57.899 50.000 0.00 0.00 0.00 3.18
385 428 7.120579 TGCACTATTTTTGGTGGTCATAGTAAG 59.879 37.037 0.00 0.00 34.41 2.34
405 448 7.628769 TTGATTGATATTTCAAGCTGCACTA 57.371 32.000 13.95 0.00 46.13 2.74
407 450 6.807708 CTTGATTGATATTTCAAGCTGCAC 57.192 37.500 13.95 0.00 46.13 4.57
421 464 8.836413 TCGTTGTAAAGAGAAAACTTGATTGAT 58.164 29.630 0.00 0.00 0.00 2.57
424 467 8.455682 TGTTCGTTGTAAAGAGAAAACTTGATT 58.544 29.630 0.00 0.00 0.00 2.57
430 473 8.521059 GTTTGATGTTCGTTGTAAAGAGAAAAC 58.479 33.333 0.00 0.00 0.00 2.43
431 474 8.237949 TGTTTGATGTTCGTTGTAAAGAGAAAA 58.762 29.630 0.00 0.00 0.00 2.29
434 477 6.912203 TGTTTGATGTTCGTTGTAAAGAGA 57.088 33.333 0.00 0.00 0.00 3.10
435 478 7.132213 ACATGTTTGATGTTCGTTGTAAAGAG 58.868 34.615 0.00 0.00 0.00 2.85
436 479 7.022055 ACATGTTTGATGTTCGTTGTAAAGA 57.978 32.000 0.00 0.00 0.00 2.52
437 480 7.678194 AACATGTTTGATGTTCGTTGTAAAG 57.322 32.000 4.92 0.00 37.69 1.85
451 494 7.094848 ATCGTGATGATGTACAAACATGTTTGA 60.095 33.333 42.94 28.32 46.49 2.69
454 497 6.741992 ATCGTGATGATGTACAAACATGTT 57.258 33.333 18.92 4.92 46.49 2.71
465 508 7.290110 TCTTCCTAACATATCGTGATGATGT 57.710 36.000 0.00 0.00 37.99 3.06
486 529 2.610438 AGGCATGTTGGGACATTCTT 57.390 45.000 0.00 0.00 43.92 2.52
521 564 1.617839 AAGCCCTTCCCCTCAGAGG 60.618 63.158 9.90 9.90 34.30 3.69
522 565 1.911471 GAAGCCCTTCCCCTCAGAG 59.089 63.158 0.00 0.00 33.64 3.35
523 566 4.153957 GAAGCCCTTCCCCTCAGA 57.846 61.111 0.00 0.00 33.64 3.27
534 577 1.179174 GGACAACACCAAGGAAGCCC 61.179 60.000 0.00 0.00 0.00 5.19
535 578 0.467290 TGGACAACACCAAGGAAGCC 60.467 55.000 0.00 0.00 36.96 4.35
536 579 1.541588 GATGGACAACACCAAGGAAGC 59.458 52.381 0.00 0.00 43.47 3.86
539 582 1.073763 CCTGATGGACAACACCAAGGA 59.926 52.381 0.00 0.00 43.47 3.36
543 586 0.184692 TTGCCTGATGGACAACACCA 59.815 50.000 0.00 0.00 44.41 4.17
545 588 1.317613 TGTTGCCTGATGGACAACAC 58.682 50.000 15.52 0.60 45.76 3.32
546 589 3.817187 TGTTGCCTGATGGACAACA 57.183 47.368 15.52 15.52 46.99 3.33
547 590 2.557924 TCATTGTTGCCTGATGGACAAC 59.442 45.455 12.16 12.16 43.76 3.32
548 591 2.874014 TCATTGTTGCCTGATGGACAA 58.126 42.857 0.00 0.00 35.45 3.18
550 593 2.821969 ACTTCATTGTTGCCTGATGGAC 59.178 45.455 0.00 0.00 34.57 4.02
551 594 3.159213 ACTTCATTGTTGCCTGATGGA 57.841 42.857 0.00 0.00 34.57 3.41
589 1452 5.008415 CCCATAAGACATGCAAAGCTTCTAG 59.992 44.000 0.00 0.00 0.00 2.43
590 1453 4.883585 CCCATAAGACATGCAAAGCTTCTA 59.116 41.667 0.00 0.00 0.00 2.10
613 1476 0.728466 GTGCTACACACGGTCGTCTC 60.728 60.000 0.00 0.00 40.07 3.36
641 1504 5.181748 ACACTTTCTCCATCAAGTCTATGC 58.818 41.667 0.00 0.00 30.48 3.14
652 1798 5.071788 TCCTCTTACACAACACTTTCTCCAT 59.928 40.000 0.00 0.00 0.00 3.41
684 1830 7.412346 CGATGTAAACAGATAGGCAGCATATTC 60.412 40.741 0.13 0.00 0.00 1.75
692 1838 5.123186 CCAAAACGATGTAAACAGATAGGCA 59.877 40.000 0.00 0.00 0.00 4.75
693 1839 5.123344 ACCAAAACGATGTAAACAGATAGGC 59.877 40.000 0.00 0.00 0.00 3.93
694 1840 6.737254 ACCAAAACGATGTAAACAGATAGG 57.263 37.500 0.00 0.00 0.00 2.57
697 1843 8.788806 TCATTTACCAAAACGATGTAAACAGAT 58.211 29.630 0.00 0.00 37.30 2.90
698 1844 8.155821 TCATTTACCAAAACGATGTAAACAGA 57.844 30.769 0.00 0.00 37.30 3.41
788 2233 8.827832 AATGTACTGCCATAATATGCCATTAT 57.172 30.769 0.00 0.00 0.00 1.28
792 2237 8.648698 AATTAATGTACTGCCATAATATGCCA 57.351 30.769 0.00 0.00 0.00 4.92
875 2321 6.091986 ACACCAAACAAAGCAATTTGTGTTAG 59.908 34.615 7.09 0.00 43.66 2.34
881 2327 3.616379 ACGACACCAAACAAAGCAATTTG 59.384 39.130 0.00 0.00 37.89 2.32
955 2401 1.298667 GTGCGTGGGGTAGATGGTT 59.701 57.895 0.00 0.00 0.00 3.67
957 2403 1.449601 GTGTGCGTGGGGTAGATGG 60.450 63.158 0.00 0.00 0.00 3.51
977 2424 5.105957 ATCTCCCAAGATGATCGACTATTCG 60.106 44.000 0.00 0.00 42.60 3.34
994 2441 2.705658 CAGTAATAGTGCCCATCTCCCA 59.294 50.000 0.00 0.00 0.00 4.37
995 2442 2.551071 GCAGTAATAGTGCCCATCTCCC 60.551 54.545 8.84 0.00 38.58 4.30
1005 2452 3.812053 GGAATCCAGCAGCAGTAATAGTG 59.188 47.826 0.00 0.00 0.00 2.74
1030 2477 9.598517 TGCAATTATGGGAATGAGAAATAAAAC 57.401 29.630 0.00 0.00 0.00 2.43
1125 2572 0.392327 TAATTGTGCTGCCGCTGCTA 60.392 50.000 21.13 9.22 38.71 3.49
1136 2583 9.241317 CATGGAAAATAGAATCACTAATTGTGC 57.759 33.333 0.00 0.00 45.81 4.57
1170 2620 2.773487 CTGTTGGTGATTACGGGAACA 58.227 47.619 0.00 0.00 0.00 3.18
1214 2664 2.267681 CTTTAGAGCGCGGTCGGAGT 62.268 60.000 30.16 16.89 35.95 3.85
1332 2785 4.664188 CTTCCACGAAGTAGTAGAAGAGC 58.336 47.826 0.00 0.00 41.61 4.09
1413 2888 2.463752 ACAATTCCCAGCGGTACTAGA 58.536 47.619 0.00 0.00 0.00 2.43
1423 2898 7.118101 CCAAACATATTGTTCAACAATTCCCAG 59.882 37.037 20.74 9.18 45.80 4.45
1426 2901 7.961325 ACCAAACATATTGTTCAACAATTCC 57.039 32.000 20.74 0.00 45.80 3.01
1494 2969 9.040939 CAATCCGTTGTGATTTCTACATGTATA 57.959 33.333 5.91 0.00 32.71 1.47
1495 2970 7.768582 TCAATCCGTTGTGATTTCTACATGTAT 59.231 33.333 5.91 0.00 36.69 2.29
1496 2971 7.100409 TCAATCCGTTGTGATTTCTACATGTA 58.900 34.615 5.25 5.25 36.69 2.29
1498 2973 6.421377 TCAATCCGTTGTGATTTCTACATG 57.579 37.500 0.00 0.00 36.69 3.21
1499 2974 8.777413 CATATCAATCCGTTGTGATTTCTACAT 58.223 33.333 0.00 0.00 36.00 2.29
1502 2977 7.505258 TCCATATCAATCCGTTGTGATTTCTA 58.495 34.615 0.00 0.00 36.00 2.10
1504 2979 6.618287 TCCATATCAATCCGTTGTGATTTC 57.382 37.500 0.00 0.00 36.00 2.17
1565 3053 1.502163 CCAATTCTCGCATCGCTCCC 61.502 60.000 0.00 0.00 0.00 4.30
1631 3119 2.200170 GACCGTTGTTCCAGGCATGC 62.200 60.000 9.90 9.90 0.00 4.06
1815 3408 6.127647 TGCAAACTCTGGCCAAATTTATAGAG 60.128 38.462 7.01 9.95 38.06 2.43
2017 3625 4.078516 GCGCCTTGTACTCGGGGT 62.079 66.667 15.64 0.00 35.81 4.95
2038 3646 2.813908 CACCGGCGTTGTAGAGGC 60.814 66.667 6.01 0.00 38.40 4.70
2047 3655 3.812019 CGTAGCTCTCACCGGCGT 61.812 66.667 6.01 0.00 0.00 5.68
2094 3702 1.202348 GTTGTTGTGGGCTAAGATGGC 59.798 52.381 0.00 0.00 0.00 4.40
2172 3798 2.159212 TCTTGTTCTTCACGACGTCCAA 60.159 45.455 10.58 4.79 0.00 3.53
2322 3954 2.818432 CGAGGTCCCTATGCGTATAGTT 59.182 50.000 17.72 0.38 35.51 2.24
2434 4206 8.079203 GCTTCGATCTATCAGAATGTCTCTTTA 58.921 37.037 0.00 0.00 37.40 1.85
2463 4235 5.313520 TCACACCACTTGCAATGATAATG 57.686 39.130 0.00 0.00 0.00 1.90
2464 4236 5.981088 TTCACACCACTTGCAATGATAAT 57.019 34.783 0.00 0.00 0.00 1.28
2466 4238 5.981088 ATTTCACACCACTTGCAATGATA 57.019 34.783 0.00 0.00 0.00 2.15
2470 4242 5.280654 AGAAATTTCACACCACTTGCAAT 57.719 34.783 19.99 0.00 0.00 3.56
2472 4244 4.431809 CAAGAAATTTCACACCACTTGCA 58.568 39.130 19.99 0.00 0.00 4.08
2548 4377 2.781681 TTCAGGTAGGCAAAGGTAGC 57.218 50.000 0.00 0.00 0.00 3.58
2721 4583 9.674068 GAGTCCTTGAAACCTATAAAGATTCTT 57.326 33.333 0.00 0.00 0.00 2.52
2763 4713 3.443681 CGATTAGCCATTTCAAGGTTGGT 59.556 43.478 0.00 0.00 32.90 3.67
2855 4805 2.510238 AGCATCGACAAGGAGCGC 60.510 61.111 0.00 0.00 0.00 5.92
2947 4900 3.274288 GGTGATGGACAGTTTGAGATCC 58.726 50.000 0.00 0.00 0.00 3.36
2950 4903 1.967779 TCGGTGATGGACAGTTTGAGA 59.032 47.619 0.00 0.00 0.00 3.27
2956 4909 2.660064 GGGCTCGGTGATGGACAGT 61.660 63.158 0.00 0.00 0.00 3.55
2963 4916 1.678970 GGCTTTTGGGCTCGGTGAT 60.679 57.895 0.00 0.00 37.53 3.06
3002 4956 0.605319 GTCGACCTCAATGGCACCAA 60.605 55.000 3.51 0.00 40.22 3.67
3003 4957 1.003839 GTCGACCTCAATGGCACCA 60.004 57.895 3.51 0.00 40.22 4.17
3004 4958 1.745489 GGTCGACCTCAATGGCACC 60.745 63.158 27.64 0.00 40.22 5.01
3028 4982 0.909610 AATCTTGGCTCTCCCCGACA 60.910 55.000 0.00 0.00 0.00 4.35
3030 4984 0.253044 CAAATCTTGGCTCTCCCCGA 59.747 55.000 0.00 0.00 0.00 5.14
3057 5011 3.114616 CCAGCTCGTCTTGCCGTG 61.115 66.667 0.00 0.00 0.00 4.94
3085 5039 0.839477 CAACAGTCAAACAAAGCGCG 59.161 50.000 0.00 0.00 0.00 6.86
3116 5071 1.283029 CACATCATCTGGAACCTGGGT 59.717 52.381 0.00 0.00 0.00 4.51
3121 5076 3.066342 CAGCAATCACATCATCTGGAACC 59.934 47.826 0.00 0.00 0.00 3.62
3148 5103 5.182950 CAGGCCAAGTACACAACAATATCAA 59.817 40.000 5.01 0.00 0.00 2.57
3169 5124 1.821136 GGAAGGAAAGCAACATCCAGG 59.179 52.381 0.00 0.00 38.23 4.45
3173 5128 2.814336 AGTTCGGAAGGAAAGCAACATC 59.186 45.455 0.00 0.00 36.14 3.06
3174 5129 2.863809 AGTTCGGAAGGAAAGCAACAT 58.136 42.857 0.00 0.00 36.14 2.71
3189 5144 0.320771 ACACCCAGCAAGCTAGTTCG 60.321 55.000 0.00 0.00 0.00 3.95
3203 5158 0.958822 CCTACCAAAGCAACACACCC 59.041 55.000 0.00 0.00 0.00 4.61
3212 5167 1.207329 ACTCATCCGTCCTACCAAAGC 59.793 52.381 0.00 0.00 0.00 3.51
3230 5185 5.757988 AGCTAGCTACTTACTACTCCAACT 58.242 41.667 17.69 0.00 0.00 3.16
3231 5186 6.293571 GCTAGCTAGCTACTTACTACTCCAAC 60.294 46.154 33.71 2.82 45.62 3.77
3250 5205 6.554605 AGGATTTTCATCTCTAAGAGCTAGCT 59.445 38.462 19.45 19.45 0.00 3.32
3251 5206 6.758254 AGGATTTTCATCTCTAAGAGCTAGC 58.242 40.000 6.62 6.62 0.00 3.42
3252 5207 9.077885 ACTAGGATTTTCATCTCTAAGAGCTAG 57.922 37.037 0.00 0.00 0.00 3.42
3276 5231 4.502105 TGTGTGCCATCAATACCATACT 57.498 40.909 0.00 0.00 0.00 2.12
3285 5240 5.301551 AGAAATACAACTTGTGTGCCATCAA 59.698 36.000 4.57 0.00 41.89 2.57
3359 5329 6.051717 GCAGCTAGAGATTTGAGGTTCATAA 58.948 40.000 0.00 0.00 0.00 1.90
3377 5347 1.087202 CATAACGCGTTGGGCAGCTA 61.087 55.000 33.40 12.12 43.84 3.32
3378 5348 2.046314 ATAACGCGTTGGGCAGCT 60.046 55.556 33.40 7.98 43.84 4.24
3414 5384 3.342377 TGACAGGTCGCCATAATTTCA 57.658 42.857 0.00 0.00 0.00 2.69
3415 5385 4.695217 TTTGACAGGTCGCCATAATTTC 57.305 40.909 0.00 0.00 0.00 2.17
3429 5399 5.123661 ACAAACAAGGCCAAATTTTTGACAG 59.876 36.000 16.78 5.78 40.55 3.51
3519 5489 3.995048 GACTCGAAAGAACACCCTAAAGG 59.005 47.826 0.00 0.00 41.32 3.11
3523 5493 4.950205 AAAGACTCGAAAGAACACCCTA 57.050 40.909 0.00 0.00 41.32 3.53
3542 5512 7.382110 TGTTTGAATCAGTTGGAACTTGAAAA 58.618 30.769 0.00 0.00 37.08 2.29
3543 5513 6.929625 TGTTTGAATCAGTTGGAACTTGAAA 58.070 32.000 0.00 0.00 37.08 2.69
3544 5514 6.522625 TGTTTGAATCAGTTGGAACTTGAA 57.477 33.333 0.00 0.00 37.08 2.69
3545 5515 6.071672 TGTTGTTTGAATCAGTTGGAACTTGA 60.072 34.615 0.00 0.00 37.08 3.02
3546 5516 6.034898 GTGTTGTTTGAATCAGTTGGAACTTG 59.965 38.462 0.00 0.00 37.08 3.16
3547 5517 6.099341 GTGTTGTTTGAATCAGTTGGAACTT 58.901 36.000 0.00 0.00 37.08 2.66
3548 5518 5.650543 GTGTTGTTTGAATCAGTTGGAACT 58.349 37.500 0.00 0.00 40.60 3.01
3549 5519 4.499040 CGTGTTGTTTGAATCAGTTGGAAC 59.501 41.667 0.00 0.00 0.00 3.62
3550 5520 4.439426 CCGTGTTGTTTGAATCAGTTGGAA 60.439 41.667 0.00 0.00 0.00 3.53
3551 5521 3.066064 CCGTGTTGTTTGAATCAGTTGGA 59.934 43.478 0.00 0.00 0.00 3.53
3552 5522 3.371168 CCGTGTTGTTTGAATCAGTTGG 58.629 45.455 0.00 0.00 0.00 3.77
3553 5523 3.371168 CCCGTGTTGTTTGAATCAGTTG 58.629 45.455 0.00 0.00 0.00 3.16
3554 5524 2.223711 GCCCGTGTTGTTTGAATCAGTT 60.224 45.455 0.00 0.00 0.00 3.16
3555 5525 1.336755 GCCCGTGTTGTTTGAATCAGT 59.663 47.619 0.00 0.00 0.00 3.41
3556 5526 1.336440 TGCCCGTGTTGTTTGAATCAG 59.664 47.619 0.00 0.00 0.00 2.90
3557 5527 1.393603 TGCCCGTGTTGTTTGAATCA 58.606 45.000 0.00 0.00 0.00 2.57
3558 5528 2.723124 ATGCCCGTGTTGTTTGAATC 57.277 45.000 0.00 0.00 0.00 2.52
3559 5529 3.467374 AAATGCCCGTGTTGTTTGAAT 57.533 38.095 0.00 0.00 0.00 2.57
3560 5530 2.969628 AAATGCCCGTGTTGTTTGAA 57.030 40.000 0.00 0.00 0.00 2.69
3561 5531 4.592485 AATAAATGCCCGTGTTGTTTGA 57.408 36.364 0.00 0.00 0.00 2.69
3562 5532 4.747108 TCAAATAAATGCCCGTGTTGTTTG 59.253 37.500 0.00 0.00 35.74 2.93
3563 5533 4.950050 TCAAATAAATGCCCGTGTTGTTT 58.050 34.783 0.00 0.00 0.00 2.83
3564 5534 4.592485 TCAAATAAATGCCCGTGTTGTT 57.408 36.364 0.00 0.00 0.00 2.83
3565 5535 4.592485 TTCAAATAAATGCCCGTGTTGT 57.408 36.364 0.00 0.00 0.00 3.32
3566 5536 5.914085 TTTTCAAATAAATGCCCGTGTTG 57.086 34.783 0.00 0.00 0.00 3.33
3567 5537 7.503521 AAATTTTCAAATAAATGCCCGTGTT 57.496 28.000 0.00 0.00 0.00 3.32
3568 5538 7.227512 TGAAAATTTTCAAATAAATGCCCGTGT 59.772 29.630 27.22 0.00 43.62 4.49
3569 5539 7.579726 TGAAAATTTTCAAATAAATGCCCGTG 58.420 30.769 27.22 0.00 43.62 4.94
3570 5540 7.736447 TGAAAATTTTCAAATAAATGCCCGT 57.264 28.000 27.22 0.00 43.62 5.28
3588 5558 9.878737 AGAATTCAAGATAGGGATGATGAAAAT 57.121 29.630 8.44 0.00 31.37 1.82
3589 5559 9.705103 AAGAATTCAAGATAGGGATGATGAAAA 57.295 29.630 8.44 0.00 31.37 2.29
3590 5560 9.128404 CAAGAATTCAAGATAGGGATGATGAAA 57.872 33.333 8.44 0.00 31.37 2.69
3591 5561 8.277197 ACAAGAATTCAAGATAGGGATGATGAA 58.723 33.333 8.44 0.00 0.00 2.57
3592 5562 7.809238 ACAAGAATTCAAGATAGGGATGATGA 58.191 34.615 8.44 0.00 0.00 2.92
3593 5563 8.350722 CAACAAGAATTCAAGATAGGGATGATG 58.649 37.037 8.44 0.00 0.00 3.07
3594 5564 8.057623 ACAACAAGAATTCAAGATAGGGATGAT 58.942 33.333 8.44 0.00 0.00 2.45
3595 5565 7.405292 ACAACAAGAATTCAAGATAGGGATGA 58.595 34.615 8.44 0.00 0.00 2.92
3596 5566 7.636150 ACAACAAGAATTCAAGATAGGGATG 57.364 36.000 8.44 0.00 0.00 3.51
3597 5567 8.655935 AAACAACAAGAATTCAAGATAGGGAT 57.344 30.769 8.44 0.00 0.00 3.85
3598 5568 7.723616 TGAAACAACAAGAATTCAAGATAGGGA 59.276 33.333 8.44 0.00 0.00 4.20
3599 5569 7.885297 TGAAACAACAAGAATTCAAGATAGGG 58.115 34.615 8.44 0.00 0.00 3.53
3600 5570 9.565213 GATGAAACAACAAGAATTCAAGATAGG 57.435 33.333 8.44 0.00 35.62 2.57
3603 5573 9.472361 CAAGATGAAACAACAAGAATTCAAGAT 57.528 29.630 8.44 0.00 35.62 2.40
3604 5574 8.685427 TCAAGATGAAACAACAAGAATTCAAGA 58.315 29.630 8.44 0.00 35.62 3.02
3605 5575 8.861033 TCAAGATGAAACAACAAGAATTCAAG 57.139 30.769 8.44 1.83 35.62 3.02
3606 5576 9.467258 GATCAAGATGAAACAACAAGAATTCAA 57.533 29.630 8.44 0.00 35.62 2.69
3607 5577 8.084073 GGATCAAGATGAAACAACAAGAATTCA 58.916 33.333 8.44 0.00 36.35 2.57
3608 5578 8.084073 TGGATCAAGATGAAACAACAAGAATTC 58.916 33.333 0.00 0.00 0.00 2.17
3609 5579 7.954835 TGGATCAAGATGAAACAACAAGAATT 58.045 30.769 0.00 0.00 0.00 2.17
3610 5580 7.232127 ACTGGATCAAGATGAAACAACAAGAAT 59.768 33.333 3.42 0.00 0.00 2.40
3611 5581 6.547141 ACTGGATCAAGATGAAACAACAAGAA 59.453 34.615 3.42 0.00 0.00 2.52
3612 5582 6.016860 CACTGGATCAAGATGAAACAACAAGA 60.017 38.462 3.42 0.00 0.00 3.02
3613 5583 6.147581 CACTGGATCAAGATGAAACAACAAG 58.852 40.000 3.42 0.00 0.00 3.16
3614 5584 5.593909 ACACTGGATCAAGATGAAACAACAA 59.406 36.000 3.42 0.00 0.00 2.83
3615 5585 5.132502 ACACTGGATCAAGATGAAACAACA 58.867 37.500 3.42 0.00 0.00 3.33
3616 5586 5.239306 TGACACTGGATCAAGATGAAACAAC 59.761 40.000 3.42 0.00 0.00 3.32
3617 5587 5.375773 TGACACTGGATCAAGATGAAACAA 58.624 37.500 3.42 0.00 0.00 2.83
3618 5588 4.971939 TGACACTGGATCAAGATGAAACA 58.028 39.130 3.42 1.00 0.00 2.83
3619 5589 4.999950 ACTGACACTGGATCAAGATGAAAC 59.000 41.667 3.42 0.00 0.00 2.78
3620 5590 5.012458 AGACTGACACTGGATCAAGATGAAA 59.988 40.000 3.42 0.00 0.00 2.69
3621 5591 4.529769 AGACTGACACTGGATCAAGATGAA 59.470 41.667 3.42 0.00 0.00 2.57
3622 5592 4.081807 CAGACTGACACTGGATCAAGATGA 60.082 45.833 3.42 0.00 0.00 2.92
3623 5593 4.081807 TCAGACTGACACTGGATCAAGATG 60.082 45.833 3.42 1.23 36.22 2.90
3624 5594 4.092279 TCAGACTGACACTGGATCAAGAT 58.908 43.478 3.42 0.00 36.22 2.40
3625 5595 3.500343 TCAGACTGACACTGGATCAAGA 58.500 45.455 3.42 0.00 36.22 3.02
3626 5596 3.949842 TCAGACTGACACTGGATCAAG 57.050 47.619 0.00 0.00 36.22 3.02
3627 5597 4.141733 TGTTTCAGACTGACACTGGATCAA 60.142 41.667 19.69 0.58 36.22 2.57
3628 5598 3.387699 TGTTTCAGACTGACACTGGATCA 59.612 43.478 19.69 2.17 36.22 2.92
3629 5599 3.995199 TGTTTCAGACTGACACTGGATC 58.005 45.455 19.69 0.00 36.22 3.36
3630 5600 4.285517 AGATGTTTCAGACTGACACTGGAT 59.714 41.667 19.69 7.76 36.22 3.41
3631 5601 3.643320 AGATGTTTCAGACTGACACTGGA 59.357 43.478 19.69 3.54 36.22 3.86
3632 5602 4.000331 AGATGTTTCAGACTGACACTGG 58.000 45.455 19.69 0.00 36.22 4.00
3633 5603 7.664082 AATTAGATGTTTCAGACTGACACTG 57.336 36.000 19.69 0.00 36.80 3.66
3634 5604 9.778741 TTTAATTAGATGTTTCAGACTGACACT 57.221 29.630 19.69 11.61 29.03 3.55
3639 5609 9.994432 GGTGATTTAATTAGATGTTTCAGACTG 57.006 33.333 0.00 0.00 0.00 3.51
3640 5610 8.883731 CGGTGATTTAATTAGATGTTTCAGACT 58.116 33.333 0.00 0.00 0.00 3.24
3641 5611 8.122952 CCGGTGATTTAATTAGATGTTTCAGAC 58.877 37.037 0.00 0.00 0.00 3.51
3642 5612 7.282224 CCCGGTGATTTAATTAGATGTTTCAGA 59.718 37.037 0.00 0.00 0.00 3.27
3643 5613 7.417612 CCCGGTGATTTAATTAGATGTTTCAG 58.582 38.462 0.00 0.00 0.00 3.02
3644 5614 6.320164 CCCCGGTGATTTAATTAGATGTTTCA 59.680 38.462 0.00 0.00 0.00 2.69
3645 5615 6.544564 TCCCCGGTGATTTAATTAGATGTTTC 59.455 38.462 0.00 0.00 0.00 2.78
3646 5616 6.428295 TCCCCGGTGATTTAATTAGATGTTT 58.572 36.000 0.00 0.00 0.00 2.83
3647 5617 6.008696 TCCCCGGTGATTTAATTAGATGTT 57.991 37.500 0.00 0.00 0.00 2.71
3648 5618 5.368523 TCTCCCCGGTGATTTAATTAGATGT 59.631 40.000 0.00 0.00 0.00 3.06
3649 5619 5.865085 TCTCCCCGGTGATTTAATTAGATG 58.135 41.667 0.00 0.00 0.00 2.90
3650 5620 5.513267 GCTCTCCCCGGTGATTTAATTAGAT 60.513 44.000 0.00 0.00 0.00 1.98
3651 5621 4.202326 GCTCTCCCCGGTGATTTAATTAGA 60.202 45.833 0.00 0.00 0.00 2.10
3652 5622 4.065789 GCTCTCCCCGGTGATTTAATTAG 58.934 47.826 0.00 0.00 0.00 1.73
3653 5623 3.714798 AGCTCTCCCCGGTGATTTAATTA 59.285 43.478 0.00 0.00 0.00 1.40
3654 5624 2.509964 AGCTCTCCCCGGTGATTTAATT 59.490 45.455 0.00 0.00 0.00 1.40
3655 5625 2.127708 AGCTCTCCCCGGTGATTTAAT 58.872 47.619 0.00 0.00 0.00 1.40
3656 5626 1.580059 AGCTCTCCCCGGTGATTTAA 58.420 50.000 0.00 0.00 0.00 1.52
3657 5627 2.037144 GTAGCTCTCCCCGGTGATTTA 58.963 52.381 0.00 0.00 0.00 1.40
3658 5628 0.831307 GTAGCTCTCCCCGGTGATTT 59.169 55.000 0.00 0.00 0.00 2.17
3659 5629 1.392710 CGTAGCTCTCCCCGGTGATT 61.393 60.000 0.00 0.00 0.00 2.57
3660 5630 1.828660 CGTAGCTCTCCCCGGTGAT 60.829 63.158 0.00 0.00 0.00 3.06
3661 5631 2.439701 CGTAGCTCTCCCCGGTGA 60.440 66.667 0.00 0.00 0.00 4.02
3674 5644 0.030369 GGATGTAGTGACCGGCGTAG 59.970 60.000 6.01 0.00 0.00 3.51
3675 5645 1.386525 GGGATGTAGTGACCGGCGTA 61.387 60.000 6.01 0.00 0.00 4.42
3676 5646 2.718073 GGGATGTAGTGACCGGCGT 61.718 63.158 6.01 0.00 0.00 5.68
3677 5647 2.106332 GGGATGTAGTGACCGGCG 59.894 66.667 0.00 0.00 0.00 6.46
3678 5648 2.504519 GGGGATGTAGTGACCGGC 59.495 66.667 0.00 0.00 0.00 6.13
3679 5649 1.268992 TTGGGGGATGTAGTGACCGG 61.269 60.000 0.00 0.00 0.00 5.28
3680 5650 0.107848 GTTGGGGGATGTAGTGACCG 60.108 60.000 0.00 0.00 0.00 4.79
3681 5651 1.209747 GAGTTGGGGGATGTAGTGACC 59.790 57.143 0.00 0.00 0.00 4.02
3682 5652 1.134788 CGAGTTGGGGGATGTAGTGAC 60.135 57.143 0.00 0.00 0.00 3.67
3683 5653 1.191535 CGAGTTGGGGGATGTAGTGA 58.808 55.000 0.00 0.00 0.00 3.41
3684 5654 0.462047 GCGAGTTGGGGGATGTAGTG 60.462 60.000 0.00 0.00 0.00 2.74
3685 5655 1.623542 GGCGAGTTGGGGGATGTAGT 61.624 60.000 0.00 0.00 0.00 2.73
3686 5656 1.146263 GGCGAGTTGGGGGATGTAG 59.854 63.158 0.00 0.00 0.00 2.74
3687 5657 2.727392 CGGCGAGTTGGGGGATGTA 61.727 63.158 0.00 0.00 0.00 2.29
3688 5658 4.096003 CGGCGAGTTGGGGGATGT 62.096 66.667 0.00 0.00 0.00 3.06
3696 5666 3.499737 GATGGTGGCGGCGAGTTG 61.500 66.667 12.98 0.00 0.00 3.16
3697 5667 1.895020 TAAGATGGTGGCGGCGAGTT 61.895 55.000 12.98 0.00 0.00 3.01
3698 5668 2.298158 CTAAGATGGTGGCGGCGAGT 62.298 60.000 12.98 0.00 0.00 4.18
3699 5669 1.592669 CTAAGATGGTGGCGGCGAG 60.593 63.158 12.98 0.00 0.00 5.03
3700 5670 2.499205 CTAAGATGGTGGCGGCGA 59.501 61.111 12.98 0.00 0.00 5.54
3701 5671 3.272334 GCTAAGATGGTGGCGGCG 61.272 66.667 0.51 0.51 0.00 6.46
3702 5672 2.124736 TGCTAAGATGGTGGCGGC 60.125 61.111 0.00 0.00 0.00 6.53
3703 5673 1.078497 TGTGCTAAGATGGTGGCGG 60.078 57.895 0.00 0.00 0.00 6.13
3704 5674 0.673333 TGTGTGCTAAGATGGTGGCG 60.673 55.000 0.00 0.00 0.00 5.69
3705 5675 1.200020 GTTGTGTGCTAAGATGGTGGC 59.800 52.381 0.00 0.00 0.00 5.01
3706 5676 2.485426 CTGTTGTGTGCTAAGATGGTGG 59.515 50.000 0.00 0.00 0.00 4.61
3707 5677 2.095567 GCTGTTGTGTGCTAAGATGGTG 60.096 50.000 0.00 0.00 0.00 4.17
3708 5678 2.154462 GCTGTTGTGTGCTAAGATGGT 58.846 47.619 0.00 0.00 0.00 3.55
3709 5679 2.153645 TGCTGTTGTGTGCTAAGATGG 58.846 47.619 0.00 0.00 0.00 3.51
3710 5680 3.902261 TTGCTGTTGTGTGCTAAGATG 57.098 42.857 0.00 0.00 0.00 2.90
3711 5681 3.822735 ACATTGCTGTTGTGTGCTAAGAT 59.177 39.130 0.00 0.00 28.70 2.40
3712 5682 3.213506 ACATTGCTGTTGTGTGCTAAGA 58.786 40.909 0.00 0.00 28.70 2.10
3713 5683 3.631145 ACATTGCTGTTGTGTGCTAAG 57.369 42.857 0.00 0.00 28.70 2.18
3714 5684 3.501828 CCTACATTGCTGTTGTGTGCTAA 59.498 43.478 0.00 0.00 36.79 3.09
3715 5685 3.073678 CCTACATTGCTGTTGTGTGCTA 58.926 45.455 0.00 0.00 36.79 3.49
3716 5686 1.881973 CCTACATTGCTGTTGTGTGCT 59.118 47.619 0.00 0.00 36.79 4.40
3717 5687 1.068333 CCCTACATTGCTGTTGTGTGC 60.068 52.381 0.00 0.00 36.79 4.57
3718 5688 1.541147 CCCCTACATTGCTGTTGTGTG 59.459 52.381 0.00 0.00 36.79 3.82
3719 5689 1.547675 CCCCCTACATTGCTGTTGTGT 60.548 52.381 0.00 0.00 36.79 3.72
3720 5690 1.176527 CCCCCTACATTGCTGTTGTG 58.823 55.000 0.00 0.00 36.79 3.33
3721 5691 0.611896 GCCCCCTACATTGCTGTTGT 60.612 55.000 0.00 0.00 36.79 3.32
3722 5692 0.323725 AGCCCCCTACATTGCTGTTG 60.324 55.000 0.00 0.00 36.79 3.33
3723 5693 1.295020 TAGCCCCCTACATTGCTGTT 58.705 50.000 0.00 0.00 36.79 3.16
3724 5694 1.143684 CATAGCCCCCTACATTGCTGT 59.856 52.381 0.00 0.00 39.49 4.40
3725 5695 1.143684 ACATAGCCCCCTACATTGCTG 59.856 52.381 0.00 0.00 35.34 4.41
3726 5696 1.421646 GACATAGCCCCCTACATTGCT 59.578 52.381 0.00 0.00 37.84 3.91
3727 5697 1.545651 GGACATAGCCCCCTACATTGC 60.546 57.143 0.00 0.00 0.00 3.56
3728 5698 1.774254 TGGACATAGCCCCCTACATTG 59.226 52.381 0.00 0.00 0.00 2.82
3729 5699 2.057922 CTGGACATAGCCCCCTACATT 58.942 52.381 0.00 0.00 0.00 2.71
3730 5700 1.734655 CTGGACATAGCCCCCTACAT 58.265 55.000 0.00 0.00 0.00 2.29
3731 5701 1.054406 GCTGGACATAGCCCCCTACA 61.054 60.000 0.00 0.00 37.73 2.74
3751 5721 2.283388 TGAACCCTCCGGCGTACT 60.283 61.111 6.01 0.00 0.00 2.73
3874 5847 7.147983 ACAGAAAGACTAGCTAGTACTCATTGG 60.148 40.741 26.11 13.67 36.50 3.16
3878 5851 7.230913 ACAAACAGAAAGACTAGCTAGTACTCA 59.769 37.037 26.11 0.00 36.50 3.41
3893 5866 6.146021 ACAGAAACAAAAGCACAAACAGAAAG 59.854 34.615 0.00 0.00 0.00 2.62
3894 5867 5.988561 ACAGAAACAAAAGCACAAACAGAAA 59.011 32.000 0.00 0.00 0.00 2.52
3895 5868 5.537188 ACAGAAACAAAAGCACAAACAGAA 58.463 33.333 0.00 0.00 0.00 3.02
3896 5869 5.132897 ACAGAAACAAAAGCACAAACAGA 57.867 34.783 0.00 0.00 0.00 3.41
3897 5870 5.177327 ACAACAGAAACAAAAGCACAAACAG 59.823 36.000 0.00 0.00 0.00 3.16
3898 5871 5.053145 ACAACAGAAACAAAAGCACAAACA 58.947 33.333 0.00 0.00 0.00 2.83
3899 5872 5.590104 ACAACAGAAACAAAAGCACAAAC 57.410 34.783 0.00 0.00 0.00 2.93
3900 5873 6.451393 AGTACAACAGAAACAAAAGCACAAA 58.549 32.000 0.00 0.00 0.00 2.83
3901 5874 6.019779 AGTACAACAGAAACAAAAGCACAA 57.980 33.333 0.00 0.00 0.00 3.33
3902 5875 5.392595 GGAGTACAACAGAAACAAAAGCACA 60.393 40.000 0.00 0.00 0.00 4.57
3903 5876 5.034797 GGAGTACAACAGAAACAAAAGCAC 58.965 41.667 0.00 0.00 0.00 4.40
3904 5877 4.097286 GGGAGTACAACAGAAACAAAAGCA 59.903 41.667 0.00 0.00 0.00 3.91
3905 5878 4.338400 AGGGAGTACAACAGAAACAAAAGC 59.662 41.667 0.00 0.00 0.00 3.51
3906 5879 5.008712 GGAGGGAGTACAACAGAAACAAAAG 59.991 44.000 0.00 0.00 0.00 2.27
3924 5897 3.681593 CAAGTATTTTGGAACGGAGGGA 58.318 45.455 0.00 0.00 0.00 4.20
3951 5924 7.432252 CAGAACTTGTCATGGTTTTAGTTCAAC 59.568 37.037 19.40 0.00 42.27 3.18
3954 5927 7.027778 ACAGAACTTGTCATGGTTTTAGTTC 57.972 36.000 13.99 13.99 40.91 3.01
3966 5951 3.530265 ACGGTACAACAGAACTTGTCA 57.470 42.857 0.00 0.00 39.73 3.58
3967 5952 3.427863 GCTACGGTACAACAGAACTTGTC 59.572 47.826 0.00 0.00 39.73 3.18
3984 5969 3.753797 TGGATAGATCACTGCTAGCTACG 59.246 47.826 17.23 6.98 0.00 3.51
4007 5992 5.353678 CAGAAATGTCTGGAGGTCTGAATTC 59.646 44.000 4.82 0.00 46.55 2.17
4035 6020 0.525668 CGATGAAGTCGGAAGGGACG 60.526 60.000 0.00 0.00 46.47 4.79
4060 6045 8.097662 TGTTTTGTCCCTGTTTAAACTTGAAAT 58.902 29.630 18.72 0.00 31.71 2.17
4077 6062 2.548875 TGTGCATTTGCTGTTTTGTCC 58.451 42.857 3.94 0.00 42.66 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.