Multiple sequence alignment - TraesCS4D01G011200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G011200 chr4D 100.000 5123 0 0 1 5123 5522657 5527779 0.000000e+00 9461.0
1 TraesCS4D01G011200 chr4D 77.457 346 30 25 4612 4928 2695917 2696243 4.100000e-36 163.0
2 TraesCS4D01G011200 chr4D 77.607 326 29 18 4632 4928 5372017 5371707 1.910000e-34 158.0
3 TraesCS4D01G011200 chr4B 92.484 3978 174 43 602 4515 9518696 9514780 0.000000e+00 5574.0
4 TraesCS4D01G011200 chr4B 83.901 1497 177 32 2919 4378 9504085 9502616 0.000000e+00 1371.0
5 TraesCS4D01G011200 chr4B 77.457 346 52 17 4630 4953 9468669 9468328 3.150000e-42 183.0
6 TraesCS4D01G011200 chr4B 83.761 117 7 3 4632 4736 9511512 9511396 3.260000e-17 100.0
7 TraesCS4D01G011200 chr4A 93.555 3755 142 32 688 4399 598149755 598146058 0.000000e+00 5502.0
8 TraesCS4D01G011200 chr4A 92.308 260 14 3 15 273 598152853 598152599 1.050000e-96 364.0
9 TraesCS4D01G011200 chr4A 80.156 257 20 14 4692 4928 598371623 598371868 4.100000e-36 163.0
10 TraesCS4D01G011200 chr4A 76.062 259 13 25 4616 4844 598376287 598376526 7.070000e-14 89.8
11 TraesCS4D01G011200 chr4A 89.231 65 1 1 4557 4615 598143841 598143777 5.500000e-10 76.8
12 TraesCS4D01G011200 chr2B 88.954 1367 134 12 1535 2896 585897830 585899184 0.000000e+00 1672.0
13 TraesCS4D01G011200 chr2B 93.491 169 11 0 1734 1902 596093404 596093572 8.520000e-63 252.0
14 TraesCS4D01G011200 chr2B 100.000 36 0 0 1976 2011 596093604 596093639 3.310000e-07 67.6
15 TraesCS4D01G011200 chr3D 96.154 806 16 7 1 794 3763739 3764541 0.000000e+00 1303.0
16 TraesCS4D01G011200 chr3D 90.367 218 17 2 3975 4190 103814547 103814332 3.020000e-72 283.0
17 TraesCS4D01G011200 chr7D 73.907 1395 300 52 2758 4121 589318395 589317034 7.660000e-138 501.0
18 TraesCS4D01G011200 chr7D 90.826 218 16 2 3975 4190 590490585 590490800 6.490000e-74 289.0
19 TraesCS4D01G011200 chr7D 72.032 876 217 28 3139 4000 511326189 511327050 8.580000e-58 235.0
20 TraesCS4D01G011200 chr7D 93.182 88 5 1 1741 1828 319910401 319910315 1.500000e-25 128.0
21 TraesCS4D01G011200 chr2D 91.284 218 15 2 3975 4190 166153002 166153217 1.390000e-75 294.0
22 TraesCS4D01G011200 chr2A 88.991 218 20 2 3975 4190 424545284 424545069 3.040000e-67 267.0
23 TraesCS4D01G011200 chr2A 97.619 42 0 1 1758 1799 752552023 752552063 2.560000e-08 71.3
24 TraesCS4D01G011200 chr7A 71.950 877 216 29 3139 4000 583872929 583873790 3.990000e-56 230.0
25 TraesCS4D01G011200 chr7B 71.689 876 220 27 3139 4000 540249589 540250450 8.640000e-53 219.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G011200 chr4D 5522657 5527779 5122 False 9461.000000 9461 100.0000 1 5123 1 chr4D.!!$F2 5122
1 TraesCS4D01G011200 chr4B 9511396 9518696 7300 True 2837.000000 5574 88.1225 602 4736 2 chr4B.!!$R3 4134
2 TraesCS4D01G011200 chr4B 9502616 9504085 1469 True 1371.000000 1371 83.9010 2919 4378 1 chr4B.!!$R2 1459
3 TraesCS4D01G011200 chr4A 598143777 598152853 9076 True 1980.933333 5502 91.6980 15 4615 3 chr4A.!!$R1 4600
4 TraesCS4D01G011200 chr2B 585897830 585899184 1354 False 1672.000000 1672 88.9540 1535 2896 1 chr2B.!!$F1 1361
5 TraesCS4D01G011200 chr3D 3763739 3764541 802 False 1303.000000 1303 96.1540 1 794 1 chr3D.!!$F1 793
6 TraesCS4D01G011200 chr7D 589317034 589318395 1361 True 501.000000 501 73.9070 2758 4121 1 chr7D.!!$R2 1363
7 TraesCS4D01G011200 chr7D 511326189 511327050 861 False 235.000000 235 72.0320 3139 4000 1 chr7D.!!$F1 861
8 TraesCS4D01G011200 chr7A 583872929 583873790 861 False 230.000000 230 71.9500 3139 4000 1 chr7A.!!$F1 861
9 TraesCS4D01G011200 chr7B 540249589 540250450 861 False 219.000000 219 71.6890 3139 4000 1 chr7B.!!$F1 861

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
868 3455 0.033228 CATCACTCCCCATCGCTCTC 59.967 60.0 0.00 0.0 0.00 3.20 F
1686 4280 0.038159 AGAAGAAGGACGGCGACAAG 60.038 55.0 16.62 0.0 0.00 3.16 F
1941 4553 2.301296 TCTCAAGGCCAAGAAGAGTCAG 59.699 50.0 5.01 0.0 0.00 3.51 F
3122 5753 0.598158 TTCGACAACGCCAGGTACAC 60.598 55.0 0.00 0.0 39.58 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1679 4273 2.556287 CGTCTTTGGGCTTGTCGC 59.444 61.111 0.0 0.0 38.13 5.19 R
3021 5652 0.672401 GCGGGTTGAATTGGTCGAGA 60.672 55.000 0.0 0.0 0.00 4.04 R
3555 6207 1.687840 CACCCGATGACCCCACCTA 60.688 63.158 0.0 0.0 0.00 3.08 R
4908 12299 0.033503 TCCTAGATCAGGCCGTCACA 60.034 55.000 0.0 0.0 45.10 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
119 120 2.480555 GGCGAGCATTCCGTTGTG 59.519 61.111 0.00 0.00 0.00 3.33
406 2958 5.649557 TGTTGTTGTCTTTGTCCAAATCTG 58.350 37.500 0.00 0.00 0.00 2.90
441 2993 4.143543 TGATTGTTCCATGAAGCAAGTCA 58.856 39.130 0.00 0.00 0.00 3.41
491 3043 3.908103 ACTAAAAAGACCCTAGGCTCACA 59.092 43.478 2.05 0.00 0.00 3.58
509 3061 3.064682 TCACAAAGTCAATCACAACCACG 59.935 43.478 0.00 0.00 0.00 4.94
515 3077 1.972075 TCAATCACAACCACGTCCCTA 59.028 47.619 0.00 0.00 0.00 3.53
563 3125 2.780149 ATTCGTTGCAAACCGAGCGC 62.780 55.000 11.36 0.00 46.28 5.92
567 3129 2.612567 TTGCAAACCGAGCGCGATT 61.613 52.632 12.10 0.00 40.82 3.34
568 3130 1.292571 TTGCAAACCGAGCGCGATTA 61.293 50.000 12.10 0.00 40.82 1.75
569 3131 1.292571 TGCAAACCGAGCGCGATTAA 61.293 50.000 12.10 0.00 40.82 1.40
850 3437 0.840288 CGGTCATATCCCCATCCCCA 60.840 60.000 0.00 0.00 0.00 4.96
851 3438 1.686236 GGTCATATCCCCATCCCCAT 58.314 55.000 0.00 0.00 0.00 4.00
854 3441 2.025887 GTCATATCCCCATCCCCATCAC 60.026 54.545 0.00 0.00 0.00 3.06
855 3442 2.157801 TCATATCCCCATCCCCATCACT 60.158 50.000 0.00 0.00 0.00 3.41
856 3443 2.044793 TATCCCCATCCCCATCACTC 57.955 55.000 0.00 0.00 0.00 3.51
858 3445 2.464403 CCCCATCCCCATCACTCCC 61.464 68.421 0.00 0.00 0.00 4.30
859 3446 2.464403 CCCATCCCCATCACTCCCC 61.464 68.421 0.00 0.00 0.00 4.81
860 3447 1.697394 CCATCCCCATCACTCCCCA 60.697 63.158 0.00 0.00 0.00 4.96
861 3448 1.070127 CCATCCCCATCACTCCCCAT 61.070 60.000 0.00 0.00 0.00 4.00
862 3449 0.403271 CATCCCCATCACTCCCCATC 59.597 60.000 0.00 0.00 0.00 3.51
863 3450 1.130054 ATCCCCATCACTCCCCATCG 61.130 60.000 0.00 0.00 0.00 3.84
864 3451 2.111878 CCCATCACTCCCCATCGC 59.888 66.667 0.00 0.00 0.00 4.58
865 3452 2.446848 CCCATCACTCCCCATCGCT 61.447 63.158 0.00 0.00 0.00 4.93
866 3453 1.070445 CCATCACTCCCCATCGCTC 59.930 63.158 0.00 0.00 0.00 5.03
867 3454 1.406065 CCATCACTCCCCATCGCTCT 61.406 60.000 0.00 0.00 0.00 4.09
868 3455 0.033228 CATCACTCCCCATCGCTCTC 59.967 60.000 0.00 0.00 0.00 3.20
869 3456 0.397675 ATCACTCCCCATCGCTCTCA 60.398 55.000 0.00 0.00 0.00 3.27
870 3457 1.142748 CACTCCCCATCGCTCTCAC 59.857 63.158 0.00 0.00 0.00 3.51
871 3458 2.060980 ACTCCCCATCGCTCTCACC 61.061 63.158 0.00 0.00 0.00 4.02
872 3459 2.038813 TCCCCATCGCTCTCACCA 59.961 61.111 0.00 0.00 0.00 4.17
912 3499 2.355956 GATTCGATCGACCCCCGC 60.356 66.667 19.26 0.00 38.37 6.13
913 3500 3.146726 GATTCGATCGACCCCCGCA 62.147 63.158 19.26 0.81 38.37 5.69
927 3514 1.338020 CCCCGCAGCCTTTAATCAATC 59.662 52.381 0.00 0.00 0.00 2.67
928 3515 2.023673 CCCGCAGCCTTTAATCAATCA 58.976 47.619 0.00 0.00 0.00 2.57
931 3518 2.684881 CGCAGCCTTTAATCAATCACCT 59.315 45.455 0.00 0.00 0.00 4.00
934 3521 5.105063 GCAGCCTTTAATCAATCACCTTTC 58.895 41.667 0.00 0.00 0.00 2.62
939 3526 1.094785 AATCAATCACCTTTCCGCGG 58.905 50.000 22.12 22.12 0.00 6.46
987 3574 1.330655 CGAGGGGAAGCCAAGCTCTA 61.331 60.000 0.00 0.00 38.25 2.43
1305 3892 1.672356 CCTCGGCAAGGTCAAGGTG 60.672 63.158 0.00 0.00 40.67 4.00
1414 4001 1.561542 AGATCGGCCTCAAGATTTGGT 59.438 47.619 0.00 0.00 0.00 3.67
1512 4102 1.376037 CCCTGCGGACAAGAAGGAC 60.376 63.158 0.00 0.00 39.41 3.85
1572 4162 2.261671 GAGAAGAAGCCGGACGCA 59.738 61.111 5.05 0.00 41.38 5.24
1627 4220 2.431454 CCAAACCAGAGGAGAAGAAGC 58.569 52.381 0.00 0.00 0.00 3.86
1676 4270 3.177228 CTGAGAAGGGGAAGAAGAAGGA 58.823 50.000 0.00 0.00 0.00 3.36
1677 4271 2.907042 TGAGAAGGGGAAGAAGAAGGAC 59.093 50.000 0.00 0.00 0.00 3.85
1678 4272 1.903183 AGAAGGGGAAGAAGAAGGACG 59.097 52.381 0.00 0.00 0.00 4.79
1679 4273 0.984995 AAGGGGAAGAAGAAGGACGG 59.015 55.000 0.00 0.00 0.00 4.79
1680 4274 1.078356 GGGGAAGAAGAAGGACGGC 60.078 63.158 0.00 0.00 0.00 5.68
1681 4275 1.448013 GGGAAGAAGAAGGACGGCG 60.448 63.158 4.80 4.80 0.00 6.46
1682 4276 1.590147 GGAAGAAGAAGGACGGCGA 59.410 57.895 16.62 0.00 0.00 5.54
1683 4277 0.736672 GGAAGAAGAAGGACGGCGAC 60.737 60.000 16.62 7.58 0.00 5.19
1684 4278 0.038526 GAAGAAGAAGGACGGCGACA 60.039 55.000 16.62 0.00 0.00 4.35
1685 4279 0.391597 AAGAAGAAGGACGGCGACAA 59.608 50.000 16.62 0.00 0.00 3.18
1686 4280 0.038159 AGAAGAAGGACGGCGACAAG 60.038 55.000 16.62 0.00 0.00 3.16
1734 4346 2.759795 GGCAAGAAGGAGGTGGCT 59.240 61.111 0.00 0.00 35.12 4.75
1941 4553 2.301296 TCTCAAGGCCAAGAAGAGTCAG 59.699 50.000 5.01 0.00 0.00 3.51
2322 4943 2.347490 GAGGCGTTCCAGGAAGCA 59.653 61.111 19.38 0.00 33.74 3.91
2745 5375 4.742201 TCGCGCTGGCTCAACCTC 62.742 66.667 5.56 0.00 40.22 3.85
2931 5562 3.971702 GCCTCCAACCTGGTGCCT 61.972 66.667 0.00 0.00 39.03 4.75
3030 5661 1.375396 CCGCACCATTCTCGACCAA 60.375 57.895 0.00 0.00 0.00 3.67
3122 5753 0.598158 TTCGACAACGCCAGGTACAC 60.598 55.000 0.00 0.00 39.58 2.90
3128 5759 4.814294 CGCCAGGTACACCGCCTC 62.814 72.222 0.00 0.00 42.08 4.70
3130 5761 4.814294 CCAGGTACACCGCCTCGC 62.814 72.222 0.00 0.00 42.08 5.03
3195 5844 3.542676 ACGCTGGACACCAACCGA 61.543 61.111 14.17 0.00 34.15 4.69
3921 6615 4.687215 GTGGAGGCGCTGCTGTCA 62.687 66.667 7.64 0.00 0.00 3.58
4124 6818 4.208686 CGACCGGGTGCTCTAGCC 62.209 72.222 3.30 0.00 43.68 3.93
4163 6861 6.291269 CGTTGTTTTTCTTTGAGCTTGCTTAG 60.291 38.462 0.00 0.00 0.00 2.18
4176 6878 3.364366 GCTTGCTTAGTGTTGCTGTACTG 60.364 47.826 0.00 0.00 0.00 2.74
4177 6879 3.744238 TGCTTAGTGTTGCTGTACTGA 57.256 42.857 3.61 0.00 0.00 3.41
4178 6880 4.271696 TGCTTAGTGTTGCTGTACTGAT 57.728 40.909 3.61 0.00 0.00 2.90
4179 6881 4.245660 TGCTTAGTGTTGCTGTACTGATC 58.754 43.478 3.61 0.00 0.00 2.92
4180 6882 3.619038 GCTTAGTGTTGCTGTACTGATCC 59.381 47.826 3.61 0.00 0.00 3.36
4181 6883 4.820897 CTTAGTGTTGCTGTACTGATCCA 58.179 43.478 3.61 0.00 0.00 3.41
4182 6884 3.988976 AGTGTTGCTGTACTGATCCAT 57.011 42.857 3.61 0.00 0.00 3.41
4183 6885 4.292186 AGTGTTGCTGTACTGATCCATT 57.708 40.909 3.61 0.00 0.00 3.16
4184 6886 4.005650 AGTGTTGCTGTACTGATCCATTG 58.994 43.478 3.61 0.00 0.00 2.82
4186 6888 3.012518 GTTGCTGTACTGATCCATTGCT 58.987 45.455 3.61 0.00 0.00 3.91
4216 6920 4.693283 CTGCTTAGTGGGATCATCGTTTA 58.307 43.478 0.00 0.00 0.00 2.01
4403 7255 5.111989 CAGTGAAGAGTCAACTGAACTTGA 58.888 41.667 12.79 0.00 36.12 3.02
4420 7272 8.256611 TGAACTTGAATACATTCTACAGCTTC 57.743 34.615 3.76 5.06 37.67 3.86
4428 7280 5.489792 ACATTCTACAGCTTCCTGAAGAA 57.510 39.130 11.00 0.00 41.77 2.52
4432 7286 5.808366 TCTACAGCTTCCTGAAGAAAAGA 57.192 39.130 11.00 4.78 41.77 2.52
4446 7300 8.286097 CCTGAAGAAAAGAAAGAAGATGTGTAC 58.714 37.037 0.00 0.00 0.00 2.90
4494 7349 7.171678 ACACATTCTACTGCTTACTGAAGAAAC 59.828 37.037 0.00 0.00 34.25 2.78
4503 7358 7.171678 ACTGCTTACTGAAGAAACAAGATGTAC 59.828 37.037 0.00 0.00 34.25 2.90
4504 7359 7.217200 TGCTTACTGAAGAAACAAGATGTACT 58.783 34.615 0.00 0.00 34.25 2.73
4509 7364 7.445121 ACTGAAGAAACAAGATGTACTGATCA 58.555 34.615 0.00 0.00 0.00 2.92
4522 11366 1.218763 CTGATCATCTTGCAGGCTCG 58.781 55.000 0.00 0.00 0.00 5.03
4523 11367 0.812811 TGATCATCTTGCAGGCTCGC 60.813 55.000 0.00 2.53 0.00 5.03
4525 11369 2.261430 ATCATCTTGCAGGCTCGCCA 62.261 55.000 11.02 0.00 38.92 5.69
4530 11374 3.772853 TTGCAGGCTCGCCACACTT 62.773 57.895 11.02 0.00 38.92 3.16
4605 11525 1.280746 CACTTGCACTTGCCGACTG 59.719 57.895 0.00 0.00 41.18 3.51
4615 11535 0.392706 TTGCCGACTGATGTGTCACT 59.607 50.000 4.27 0.00 36.82 3.41
4616 11536 0.319813 TGCCGACTGATGTGTCACTG 60.320 55.000 4.27 0.00 36.82 3.66
4617 11537 0.038251 GCCGACTGATGTGTCACTGA 60.038 55.000 4.27 0.00 36.82 3.41
4619 11539 1.541588 CCGACTGATGTGTCACTGAGA 59.458 52.381 4.27 0.00 36.82 3.27
4620 11540 2.165234 CCGACTGATGTGTCACTGAGAT 59.835 50.000 4.27 0.00 36.82 2.75
4621 11541 3.433709 CGACTGATGTGTCACTGAGATC 58.566 50.000 4.27 0.00 36.82 2.75
4622 11542 3.128415 CGACTGATGTGTCACTGAGATCT 59.872 47.826 4.27 0.00 36.82 2.75
4623 11543 4.333926 CGACTGATGTGTCACTGAGATCTA 59.666 45.833 4.27 0.00 36.82 1.98
4625 11545 6.146601 ACTGATGTGTCACTGAGATCTATG 57.853 41.667 4.27 0.00 0.00 2.23
4626 11546 4.941657 TGATGTGTCACTGAGATCTATGC 58.058 43.478 4.27 0.00 0.00 3.14
4627 11547 4.403432 TGATGTGTCACTGAGATCTATGCA 59.597 41.667 4.27 0.00 0.00 3.96
4628 11548 4.382345 TGTGTCACTGAGATCTATGCAG 57.618 45.455 4.27 8.07 35.81 4.41
4629 11549 3.122297 GTGTCACTGAGATCTATGCAGC 58.878 50.000 9.28 0.00 33.03 5.25
4630 11550 2.102084 TGTCACTGAGATCTATGCAGCC 59.898 50.000 9.28 0.69 33.03 4.85
4645 12024 1.233019 CAGCCTTGTTGACACTGAGG 58.767 55.000 0.00 0.00 32.81 3.86
4651 12030 0.829990 TGTTGACACTGAGGTGAGCA 59.170 50.000 3.06 0.00 45.61 4.26
4652 12031 1.417517 TGTTGACACTGAGGTGAGCAT 59.582 47.619 3.06 0.00 45.61 3.79
4653 12032 2.158769 TGTTGACACTGAGGTGAGCATT 60.159 45.455 3.06 0.00 45.61 3.56
4659 12038 1.816835 ACTGAGGTGAGCATTGCATTG 59.183 47.619 11.91 4.20 0.00 2.82
4692 12071 2.568956 TGCTGATGGTTTAGCAGAGTCT 59.431 45.455 0.00 0.00 45.61 3.24
4736 12127 1.225704 GTGGGAGGCAGGATTCAGG 59.774 63.158 0.00 0.00 0.00 3.86
4737 12128 1.082766 TGGGAGGCAGGATTCAGGA 59.917 57.895 0.00 0.00 0.00 3.86
4738 12129 0.327867 TGGGAGGCAGGATTCAGGAT 60.328 55.000 0.00 0.00 0.00 3.24
4739 12130 0.849417 GGGAGGCAGGATTCAGGATT 59.151 55.000 0.00 0.00 0.00 3.01
4740 12131 1.216427 GGGAGGCAGGATTCAGGATTT 59.784 52.381 0.00 0.00 0.00 2.17
4741 12132 2.580962 GGAGGCAGGATTCAGGATTTC 58.419 52.381 0.00 0.00 0.00 2.17
4742 12133 2.216898 GAGGCAGGATTCAGGATTTCG 58.783 52.381 0.00 0.00 0.00 3.46
4743 12134 1.133976 AGGCAGGATTCAGGATTTCGG 60.134 52.381 0.00 0.00 0.00 4.30
4744 12135 1.134098 GGCAGGATTCAGGATTTCGGA 60.134 52.381 0.00 0.00 0.00 4.55
4745 12136 1.943340 GCAGGATTCAGGATTTCGGAC 59.057 52.381 0.00 0.00 0.00 4.79
4746 12137 2.680805 GCAGGATTCAGGATTTCGGACA 60.681 50.000 0.00 0.00 0.00 4.02
4747 12138 3.609853 CAGGATTCAGGATTTCGGACAA 58.390 45.455 0.00 0.00 0.00 3.18
4748 12139 4.009675 CAGGATTCAGGATTTCGGACAAA 58.990 43.478 0.00 0.00 0.00 2.83
4749 12140 4.458989 CAGGATTCAGGATTTCGGACAAAA 59.541 41.667 0.00 0.00 0.00 2.44
4750 12141 5.048083 CAGGATTCAGGATTTCGGACAAAAA 60.048 40.000 0.00 0.00 0.00 1.94
4773 12164 8.822652 AAAACTAGAGAAATTCATTTGCTTGG 57.177 30.769 0.00 0.00 0.00 3.61
4774 12165 6.521151 ACTAGAGAAATTCATTTGCTTGGG 57.479 37.500 0.00 0.00 0.00 4.12
4775 12166 4.198028 AGAGAAATTCATTTGCTTGGGC 57.802 40.909 0.00 0.00 39.26 5.36
4776 12167 3.836562 AGAGAAATTCATTTGCTTGGGCT 59.163 39.130 0.00 0.00 39.59 5.19
4777 12168 4.081807 AGAGAAATTCATTTGCTTGGGCTC 60.082 41.667 0.00 0.00 39.59 4.70
4778 12169 3.579586 AGAAATTCATTTGCTTGGGCTCA 59.420 39.130 0.00 0.00 39.59 4.26
4779 12170 4.224370 AGAAATTCATTTGCTTGGGCTCAT 59.776 37.500 0.00 0.00 39.59 2.90
4780 12171 5.422970 AGAAATTCATTTGCTTGGGCTCATA 59.577 36.000 0.00 0.00 39.59 2.15
4781 12172 5.881923 AATTCATTTGCTTGGGCTCATAT 57.118 34.783 0.00 0.00 39.59 1.78
4782 12173 6.982160 AATTCATTTGCTTGGGCTCATATA 57.018 33.333 0.00 0.00 39.59 0.86
4783 12174 5.772825 TTCATTTGCTTGGGCTCATATAC 57.227 39.130 0.00 0.00 39.59 1.47
4784 12175 4.790937 TCATTTGCTTGGGCTCATATACA 58.209 39.130 0.00 0.00 39.59 2.29
4785 12176 4.580167 TCATTTGCTTGGGCTCATATACAC 59.420 41.667 0.00 0.00 39.59 2.90
4786 12177 2.238942 TGCTTGGGCTCATATACACG 57.761 50.000 0.00 0.00 39.59 4.49
4787 12178 1.484653 TGCTTGGGCTCATATACACGT 59.515 47.619 0.00 0.00 39.59 4.49
4788 12179 2.696187 TGCTTGGGCTCATATACACGTA 59.304 45.455 0.00 0.00 39.59 3.57
4789 12180 3.243737 TGCTTGGGCTCATATACACGTAG 60.244 47.826 0.00 0.00 39.59 3.51
4790 12181 3.243771 GCTTGGGCTCATATACACGTAGT 60.244 47.826 0.00 0.00 36.86 2.73
4791 12182 4.022589 GCTTGGGCTCATATACACGTAGTA 60.023 45.833 0.00 0.00 35.06 1.82
4792 12183 5.443185 TTGGGCTCATATACACGTAGTAC 57.557 43.478 0.00 0.00 41.61 2.73
4804 12195 1.372582 CGTAGTACGTACTGGGAGCA 58.627 55.000 33.23 13.40 36.74 4.26
4805 12196 1.063174 CGTAGTACGTACTGGGAGCAC 59.937 57.143 33.23 22.10 36.74 4.40
4806 12197 1.403323 GTAGTACGTACTGGGAGCACC 59.597 57.143 33.23 10.45 37.10 5.01
4807 12198 0.039326 AGTACGTACTGGGAGCACCT 59.961 55.000 26.87 0.00 41.11 4.00
4808 12199 0.172803 GTACGTACTGGGAGCACCTG 59.827 60.000 18.47 1.38 43.37 4.00
4809 12200 1.601419 TACGTACTGGGAGCACCTGC 61.601 60.000 0.00 0.00 41.59 4.85
4810 12201 2.942796 CGTACTGGGAGCACCTGCA 61.943 63.158 0.00 0.00 45.16 4.41
4811 12202 1.078848 GTACTGGGAGCACCTGCAG 60.079 63.158 6.78 6.78 45.16 4.41
4812 12203 2.293318 TACTGGGAGCACCTGCAGG 61.293 63.158 31.60 31.60 45.16 4.85
4813 12204 4.421515 CTGGGAGCACCTGCAGGG 62.422 72.222 35.42 24.43 45.16 4.45
4814 12205 4.980592 TGGGAGCACCTGCAGGGA 62.981 66.667 35.42 8.19 45.16 4.20
4815 12206 3.650950 GGGAGCACCTGCAGGGAA 61.651 66.667 35.42 0.00 45.16 3.97
4816 12207 2.436109 GGAGCACCTGCAGGGAAA 59.564 61.111 35.42 0.00 45.16 3.13
4817 12208 1.228552 GGAGCACCTGCAGGGAAAA 60.229 57.895 35.42 0.00 45.16 2.29
4818 12209 0.613012 GGAGCACCTGCAGGGAAAAT 60.613 55.000 35.42 16.92 45.16 1.82
4819 12210 0.813821 GAGCACCTGCAGGGAAAATC 59.186 55.000 35.42 20.89 45.16 2.17
4820 12211 0.112995 AGCACCTGCAGGGAAAATCA 59.887 50.000 35.42 0.00 45.16 2.57
4821 12212 1.188863 GCACCTGCAGGGAAAATCAT 58.811 50.000 35.42 10.21 41.59 2.45
4822 12213 1.134907 GCACCTGCAGGGAAAATCATG 60.135 52.381 35.42 22.27 41.59 3.07
4823 12214 1.479323 CACCTGCAGGGAAAATCATGG 59.521 52.381 35.42 8.23 40.27 3.66
4824 12215 0.462789 CCTGCAGGGAAAATCATGGC 59.537 55.000 26.14 0.00 37.23 4.40
4825 12216 1.481871 CTGCAGGGAAAATCATGGCT 58.518 50.000 5.57 0.00 0.00 4.75
4826 12217 1.829222 CTGCAGGGAAAATCATGGCTT 59.171 47.619 5.57 0.00 0.00 4.35
4827 12218 1.551430 TGCAGGGAAAATCATGGCTTG 59.449 47.619 0.00 0.00 0.00 4.01
4828 12219 1.741394 GCAGGGAAAATCATGGCTTGC 60.741 52.381 0.00 0.00 0.00 4.01
4829 12220 0.819582 AGGGAAAATCATGGCTTGCG 59.180 50.000 0.00 0.00 0.00 4.85
4830 12221 0.179103 GGGAAAATCATGGCTTGCGG 60.179 55.000 0.00 0.00 0.00 5.69
4831 12222 0.807275 GGAAAATCATGGCTTGCGGC 60.807 55.000 0.00 0.00 40.90 6.53
4854 12245 2.997315 CAGCGGGACTGGGAGTGA 60.997 66.667 0.00 0.00 43.19 3.41
4855 12246 2.681778 AGCGGGACTGGGAGTGAG 60.682 66.667 0.00 0.00 0.00 3.51
4856 12247 3.775654 GCGGGACTGGGAGTGAGG 61.776 72.222 0.00 0.00 0.00 3.86
4857 12248 2.037367 CGGGACTGGGAGTGAGGA 59.963 66.667 0.00 0.00 0.00 3.71
4858 12249 1.609501 CGGGACTGGGAGTGAGGAA 60.610 63.158 0.00 0.00 0.00 3.36
4859 12250 1.889530 CGGGACTGGGAGTGAGGAAC 61.890 65.000 0.00 0.00 0.00 3.62
4861 12252 0.610687 GGACTGGGAGTGAGGAACTG 59.389 60.000 0.00 0.00 41.55 3.16
4862 12253 0.610687 GACTGGGAGTGAGGAACTGG 59.389 60.000 0.00 0.00 41.55 4.00
4863 12254 1.298014 CTGGGAGTGAGGAACTGGC 59.702 63.158 0.00 0.00 41.55 4.85
4864 12255 1.461268 TGGGAGTGAGGAACTGGCA 60.461 57.895 0.00 0.00 41.55 4.92
4865 12256 1.298014 GGGAGTGAGGAACTGGCAG 59.702 63.158 14.16 14.16 41.55 4.85
4866 12257 1.298014 GGAGTGAGGAACTGGCAGG 59.702 63.158 20.34 0.58 41.55 4.85
4867 12258 1.484444 GGAGTGAGGAACTGGCAGGT 61.484 60.000 20.34 13.55 41.55 4.00
4868 12259 1.267121 GAGTGAGGAACTGGCAGGTA 58.733 55.000 20.34 0.00 41.55 3.08
4869 12260 1.205893 GAGTGAGGAACTGGCAGGTAG 59.794 57.143 20.34 0.00 41.55 3.18
4870 12261 0.977395 GTGAGGAACTGGCAGGTAGT 59.023 55.000 20.34 2.06 41.55 2.73
4871 12262 0.976641 TGAGGAACTGGCAGGTAGTG 59.023 55.000 20.34 0.00 41.55 2.74
4872 12263 1.267121 GAGGAACTGGCAGGTAGTGA 58.733 55.000 20.34 0.00 41.55 3.41
4873 12264 1.205893 GAGGAACTGGCAGGTAGTGAG 59.794 57.143 20.34 0.00 41.55 3.51
4874 12265 0.977395 GGAACTGGCAGGTAGTGAGT 59.023 55.000 20.34 0.00 0.00 3.41
4875 12266 1.338200 GGAACTGGCAGGTAGTGAGTG 60.338 57.143 20.34 0.00 0.00 3.51
4876 12267 0.687354 AACTGGCAGGTAGTGAGTGG 59.313 55.000 20.34 0.00 0.00 4.00
4877 12268 1.194781 ACTGGCAGGTAGTGAGTGGG 61.195 60.000 20.34 0.00 0.00 4.61
4878 12269 1.152118 TGGCAGGTAGTGAGTGGGT 60.152 57.895 0.00 0.00 0.00 4.51
4879 12270 1.296715 GGCAGGTAGTGAGTGGGTG 59.703 63.158 0.00 0.00 0.00 4.61
4880 12271 1.376037 GCAGGTAGTGAGTGGGTGC 60.376 63.158 0.00 0.00 0.00 5.01
4881 12272 1.079819 CAGGTAGTGAGTGGGTGCG 60.080 63.158 0.00 0.00 0.00 5.34
4882 12273 1.533273 AGGTAGTGAGTGGGTGCGT 60.533 57.895 0.00 0.00 0.00 5.24
4883 12274 1.374252 GGTAGTGAGTGGGTGCGTG 60.374 63.158 0.00 0.00 0.00 5.34
4884 12275 1.663739 GTAGTGAGTGGGTGCGTGA 59.336 57.895 0.00 0.00 0.00 4.35
4885 12276 0.246635 GTAGTGAGTGGGTGCGTGAT 59.753 55.000 0.00 0.00 0.00 3.06
4886 12277 0.530744 TAGTGAGTGGGTGCGTGATC 59.469 55.000 0.00 0.00 0.00 2.92
4887 12278 1.741770 GTGAGTGGGTGCGTGATCC 60.742 63.158 0.00 0.00 0.00 3.36
4888 12279 1.913262 TGAGTGGGTGCGTGATCCT 60.913 57.895 0.00 0.00 0.00 3.24
4889 12280 1.448540 GAGTGGGTGCGTGATCCTG 60.449 63.158 0.00 0.00 0.00 3.86
4890 12281 2.172483 GAGTGGGTGCGTGATCCTGT 62.172 60.000 0.00 0.00 0.00 4.00
4891 12282 2.034879 GTGGGTGCGTGATCCTGTG 61.035 63.158 0.00 0.00 0.00 3.66
4892 12283 3.127533 GGGTGCGTGATCCTGTGC 61.128 66.667 0.00 0.00 0.00 4.57
4893 12284 3.490759 GGTGCGTGATCCTGTGCG 61.491 66.667 0.00 0.00 0.00 5.34
4906 12297 3.440267 GTGCGCGCACTGAAAATG 58.560 55.556 46.82 0.00 43.12 2.32
4907 12298 1.082169 GTGCGCGCACTGAAAATGA 60.082 52.632 46.82 16.70 43.12 2.57
4908 12299 0.454957 GTGCGCGCACTGAAAATGAT 60.455 50.000 46.82 0.00 43.12 2.45
4909 12300 0.454789 TGCGCGCACTGAAAATGATG 60.455 50.000 33.09 0.00 0.00 3.07
4910 12301 0.454957 GCGCGCACTGAAAATGATGT 60.455 50.000 29.10 0.00 0.00 3.06
4911 12302 1.253116 CGCGCACTGAAAATGATGTG 58.747 50.000 8.75 0.00 0.00 3.21
4912 12303 1.136000 CGCGCACTGAAAATGATGTGA 60.136 47.619 8.75 0.00 32.72 3.58
4913 12304 2.245096 GCGCACTGAAAATGATGTGAC 58.755 47.619 0.30 0.00 32.72 3.67
4914 12305 2.498905 CGCACTGAAAATGATGTGACG 58.501 47.619 0.00 0.00 32.72 4.35
4915 12306 2.725759 CGCACTGAAAATGATGTGACGG 60.726 50.000 0.00 0.00 32.72 4.79
4916 12307 2.855180 CACTGAAAATGATGTGACGGC 58.145 47.619 0.00 0.00 32.72 5.68
4917 12308 1.812571 ACTGAAAATGATGTGACGGCC 59.187 47.619 0.00 0.00 0.00 6.13
4918 12309 2.086869 CTGAAAATGATGTGACGGCCT 58.913 47.619 0.00 0.00 0.00 5.19
4919 12310 1.811965 TGAAAATGATGTGACGGCCTG 59.188 47.619 0.00 0.00 0.00 4.85
4920 12311 2.083774 GAAAATGATGTGACGGCCTGA 58.916 47.619 0.00 0.00 0.00 3.86
4921 12312 2.425143 AAATGATGTGACGGCCTGAT 57.575 45.000 0.00 0.00 0.00 2.90
4922 12313 1.959042 AATGATGTGACGGCCTGATC 58.041 50.000 0.00 0.00 0.00 2.92
4923 12314 1.126488 ATGATGTGACGGCCTGATCT 58.874 50.000 0.00 0.00 0.00 2.75
4924 12315 1.775385 TGATGTGACGGCCTGATCTA 58.225 50.000 0.00 0.00 0.00 1.98
4925 12316 1.683385 TGATGTGACGGCCTGATCTAG 59.317 52.381 0.00 0.00 0.00 2.43
4938 12329 2.682856 CTGATCTAGGATAGGAGCTCGC 59.317 54.545 7.83 0.47 39.78 5.03
4939 12330 2.021457 GATCTAGGATAGGAGCTCGCC 58.979 57.143 7.83 6.54 39.78 5.54
4940 12331 1.068948 TCTAGGATAGGAGCTCGCCT 58.931 55.000 16.78 16.78 39.78 5.52
4941 12332 1.425831 TCTAGGATAGGAGCTCGCCTT 59.574 52.381 17.50 3.33 39.78 4.35
4942 12333 2.158445 TCTAGGATAGGAGCTCGCCTTT 60.158 50.000 17.50 3.21 39.78 3.11
4943 12334 1.501582 AGGATAGGAGCTCGCCTTTT 58.498 50.000 7.83 0.00 39.50 2.27
4944 12335 1.414550 AGGATAGGAGCTCGCCTTTTC 59.585 52.381 7.83 2.07 39.50 2.29
4945 12336 1.492720 GATAGGAGCTCGCCTTTTCG 58.507 55.000 7.83 0.00 39.50 3.46
4946 12337 0.824759 ATAGGAGCTCGCCTTTTCGT 59.175 50.000 7.83 0.00 39.50 3.85
4947 12338 0.108804 TAGGAGCTCGCCTTTTCGTG 60.109 55.000 7.83 0.00 39.50 4.35
4948 12339 1.374252 GGAGCTCGCCTTTTCGTGA 60.374 57.895 7.83 0.00 0.00 4.35
4949 12340 0.949105 GGAGCTCGCCTTTTCGTGAA 60.949 55.000 7.83 0.00 0.00 3.18
4950 12341 0.440371 GAGCTCGCCTTTTCGTGAAG 59.560 55.000 0.00 0.00 0.00 3.02
4951 12342 1.154395 GCTCGCCTTTTCGTGAAGC 60.154 57.895 0.00 0.00 0.00 3.86
4952 12343 1.569479 GCTCGCCTTTTCGTGAAGCT 61.569 55.000 0.00 0.00 0.00 3.74
4953 12344 0.440371 CTCGCCTTTTCGTGAAGCTC 59.560 55.000 0.00 0.00 0.00 4.09
4954 12345 0.249699 TCGCCTTTTCGTGAAGCTCA 60.250 50.000 0.00 0.00 0.00 4.26
4955 12346 0.586319 CGCCTTTTCGTGAAGCTCAA 59.414 50.000 0.00 0.00 0.00 3.02
4956 12347 1.002900 CGCCTTTTCGTGAAGCTCAAA 60.003 47.619 0.00 0.00 0.00 2.69
4957 12348 2.654987 GCCTTTTCGTGAAGCTCAAAG 58.345 47.619 0.00 0.00 0.00 2.77
4958 12349 2.033424 GCCTTTTCGTGAAGCTCAAAGT 59.967 45.455 0.00 0.00 0.00 2.66
4959 12350 3.621794 CCTTTTCGTGAAGCTCAAAGTG 58.378 45.455 0.00 0.00 0.00 3.16
4960 12351 3.065371 CCTTTTCGTGAAGCTCAAAGTGT 59.935 43.478 0.00 0.00 0.00 3.55
4961 12352 4.438744 CCTTTTCGTGAAGCTCAAAGTGTT 60.439 41.667 0.00 0.00 0.00 3.32
4962 12353 4.695217 TTTCGTGAAGCTCAAAGTGTTT 57.305 36.364 0.00 0.00 0.00 2.83
4963 12354 5.804692 TTTCGTGAAGCTCAAAGTGTTTA 57.195 34.783 0.00 0.00 0.00 2.01
4964 12355 6.371809 TTTCGTGAAGCTCAAAGTGTTTAT 57.628 33.333 0.00 0.00 0.00 1.40
4965 12356 5.591643 TCGTGAAGCTCAAAGTGTTTATC 57.408 39.130 0.00 0.00 0.00 1.75
4966 12357 5.297547 TCGTGAAGCTCAAAGTGTTTATCT 58.702 37.500 0.00 0.00 0.00 1.98
4967 12358 5.758296 TCGTGAAGCTCAAAGTGTTTATCTT 59.242 36.000 0.00 0.00 0.00 2.40
4968 12359 5.848036 CGTGAAGCTCAAAGTGTTTATCTTG 59.152 40.000 0.00 0.00 0.00 3.02
4969 12360 6.511767 CGTGAAGCTCAAAGTGTTTATCTTGT 60.512 38.462 0.00 0.00 0.00 3.16
4970 12361 6.853362 GTGAAGCTCAAAGTGTTTATCTTGTC 59.147 38.462 0.00 0.00 0.00 3.18
4971 12362 5.597813 AGCTCAAAGTGTTTATCTTGTCG 57.402 39.130 0.00 0.00 0.00 4.35
4972 12363 4.452455 AGCTCAAAGTGTTTATCTTGTCGG 59.548 41.667 0.00 0.00 0.00 4.79
4973 12364 4.378459 GCTCAAAGTGTTTATCTTGTCGGG 60.378 45.833 0.00 0.00 0.00 5.14
4974 12365 4.710324 TCAAAGTGTTTATCTTGTCGGGT 58.290 39.130 0.00 0.00 0.00 5.28
4975 12366 4.513692 TCAAAGTGTTTATCTTGTCGGGTG 59.486 41.667 0.00 0.00 0.00 4.61
4976 12367 3.053831 AGTGTTTATCTTGTCGGGTGG 57.946 47.619 0.00 0.00 0.00 4.61
4977 12368 2.081462 GTGTTTATCTTGTCGGGTGGG 58.919 52.381 0.00 0.00 0.00 4.61
4978 12369 1.092348 GTTTATCTTGTCGGGTGGGC 58.908 55.000 0.00 0.00 0.00 5.36
4979 12370 0.988832 TTTATCTTGTCGGGTGGGCT 59.011 50.000 0.00 0.00 0.00 5.19
4980 12371 0.251916 TTATCTTGTCGGGTGGGCTG 59.748 55.000 0.00 0.00 0.00 4.85
4981 12372 0.907704 TATCTTGTCGGGTGGGCTGT 60.908 55.000 0.00 0.00 0.00 4.40
4982 12373 1.779061 ATCTTGTCGGGTGGGCTGTT 61.779 55.000 0.00 0.00 0.00 3.16
4983 12374 1.528309 CTTGTCGGGTGGGCTGTTT 60.528 57.895 0.00 0.00 0.00 2.83
4984 12375 1.076632 TTGTCGGGTGGGCTGTTTT 60.077 52.632 0.00 0.00 0.00 2.43
4985 12376 0.684805 TTGTCGGGTGGGCTGTTTTT 60.685 50.000 0.00 0.00 0.00 1.94
5011 12402 2.596904 ACGGAATCCATCTGTAACGG 57.403 50.000 0.00 0.00 46.04 4.44
5012 12403 1.829222 ACGGAATCCATCTGTAACGGT 59.171 47.619 0.00 0.00 46.04 4.83
5013 12404 2.235402 ACGGAATCCATCTGTAACGGTT 59.765 45.455 0.00 0.00 46.04 4.44
5014 12405 2.607635 CGGAATCCATCTGTAACGGTTG 59.392 50.000 3.07 0.00 0.00 3.77
5015 12406 3.606687 GGAATCCATCTGTAACGGTTGT 58.393 45.455 3.07 0.00 0.00 3.32
5016 12407 4.007659 GGAATCCATCTGTAACGGTTGTT 58.992 43.478 3.07 0.00 42.19 2.83
5017 12408 5.180271 GGAATCCATCTGTAACGGTTGTTA 58.820 41.667 3.07 0.00 39.54 2.41
5018 12409 5.820947 GGAATCCATCTGTAACGGTTGTTAT 59.179 40.000 3.07 0.00 42.26 1.89
5019 12410 6.317893 GGAATCCATCTGTAACGGTTGTTATT 59.682 38.462 3.07 0.00 42.26 1.40
5020 12411 7.496591 GGAATCCATCTGTAACGGTTGTTATTA 59.503 37.037 3.07 0.00 42.26 0.98
5021 12412 8.433421 AATCCATCTGTAACGGTTGTTATTAG 57.567 34.615 3.07 0.00 42.26 1.73
5022 12413 5.813672 TCCATCTGTAACGGTTGTTATTAGC 59.186 40.000 3.07 0.00 42.26 3.09
5023 12414 5.815740 CCATCTGTAACGGTTGTTATTAGCT 59.184 40.000 3.07 0.00 42.26 3.32
5024 12415 6.982141 CCATCTGTAACGGTTGTTATTAGCTA 59.018 38.462 3.07 0.00 42.26 3.32
5025 12416 7.042925 CCATCTGTAACGGTTGTTATTAGCTAC 60.043 40.741 3.07 0.00 42.26 3.58
5026 12417 6.923012 TCTGTAACGGTTGTTATTAGCTACA 58.077 36.000 3.07 0.00 42.26 2.74
5027 12418 7.031372 TCTGTAACGGTTGTTATTAGCTACAG 58.969 38.462 3.07 5.34 42.26 2.74
5028 12419 6.690530 TGTAACGGTTGTTATTAGCTACAGT 58.309 36.000 3.07 0.00 42.26 3.55
5029 12420 7.825681 TGTAACGGTTGTTATTAGCTACAGTA 58.174 34.615 3.07 0.00 42.26 2.74
5030 12421 7.754924 TGTAACGGTTGTTATTAGCTACAGTAC 59.245 37.037 3.07 0.00 42.26 2.73
5031 12422 6.271488 ACGGTTGTTATTAGCTACAGTACA 57.729 37.500 0.00 0.00 0.00 2.90
5032 12423 6.095377 ACGGTTGTTATTAGCTACAGTACAC 58.905 40.000 0.00 0.00 0.00 2.90
5033 12424 6.071728 ACGGTTGTTATTAGCTACAGTACACT 60.072 38.462 0.00 0.00 0.00 3.55
5034 12425 7.121168 ACGGTTGTTATTAGCTACAGTACACTA 59.879 37.037 0.00 0.00 0.00 2.74
5035 12426 7.642978 CGGTTGTTATTAGCTACAGTACACTAG 59.357 40.741 0.00 0.00 0.00 2.57
5036 12427 8.465201 GGTTGTTATTAGCTACAGTACACTAGT 58.535 37.037 0.00 0.00 0.00 2.57
5037 12428 9.852091 GTTGTTATTAGCTACAGTACACTAGTT 57.148 33.333 0.00 0.00 0.00 2.24
5039 12430 9.234827 TGTTATTAGCTACAGTACACTAGTTCA 57.765 33.333 0.00 0.00 0.00 3.18
5040 12431 9.719279 GTTATTAGCTACAGTACACTAGTTCAG 57.281 37.037 0.00 0.00 0.00 3.02
5041 12432 6.754702 TTAGCTACAGTACACTAGTTCAGG 57.245 41.667 0.00 0.00 0.00 3.86
5042 12433 4.017808 AGCTACAGTACACTAGTTCAGGG 58.982 47.826 0.00 0.00 0.00 4.45
5043 12434 3.130693 GCTACAGTACACTAGTTCAGGGG 59.869 52.174 0.00 0.00 28.64 4.79
5044 12435 3.537795 ACAGTACACTAGTTCAGGGGA 57.462 47.619 0.00 0.00 28.64 4.81
5045 12436 3.432378 ACAGTACACTAGTTCAGGGGAG 58.568 50.000 0.00 0.00 28.64 4.30
5046 12437 2.761208 CAGTACACTAGTTCAGGGGAGG 59.239 54.545 0.00 0.00 28.64 4.30
5047 12438 2.653366 AGTACACTAGTTCAGGGGAGGA 59.347 50.000 0.00 0.00 28.64 3.71
5048 12439 2.239681 ACACTAGTTCAGGGGAGGAG 57.760 55.000 0.00 0.00 28.64 3.69
5049 12440 1.433592 ACACTAGTTCAGGGGAGGAGT 59.566 52.381 0.00 0.00 28.64 3.85
5050 12441 2.104170 CACTAGTTCAGGGGAGGAGTC 58.896 57.143 0.00 0.00 0.00 3.36
5051 12442 2.004589 ACTAGTTCAGGGGAGGAGTCT 58.995 52.381 0.00 0.00 0.00 3.24
5052 12443 2.291930 ACTAGTTCAGGGGAGGAGTCTG 60.292 54.545 0.00 0.00 0.00 3.51
5053 12444 0.787084 AGTTCAGGGGAGGAGTCTGA 59.213 55.000 0.00 0.00 35.95 3.27
5054 12445 1.364328 AGTTCAGGGGAGGAGTCTGAT 59.636 52.381 0.00 0.00 37.38 2.90
5055 12446 1.484240 GTTCAGGGGAGGAGTCTGATG 59.516 57.143 0.00 0.00 37.38 3.07
5056 12447 0.689080 TCAGGGGAGGAGTCTGATGC 60.689 60.000 0.00 0.00 33.21 3.91
5057 12448 0.979709 CAGGGGAGGAGTCTGATGCA 60.980 60.000 0.00 0.00 0.00 3.96
5058 12449 0.252881 AGGGGAGGAGTCTGATGCAA 60.253 55.000 0.00 0.00 0.00 4.08
5059 12450 0.179936 GGGGAGGAGTCTGATGCAAG 59.820 60.000 0.00 0.00 0.00 4.01
5060 12451 1.198713 GGGAGGAGTCTGATGCAAGA 58.801 55.000 0.00 0.00 0.00 3.02
5061 12452 1.767681 GGGAGGAGTCTGATGCAAGAT 59.232 52.381 0.00 0.00 0.00 2.40
5062 12453 2.172293 GGGAGGAGTCTGATGCAAGATT 59.828 50.000 0.00 0.00 0.00 2.40
5063 12454 3.371380 GGGAGGAGTCTGATGCAAGATTT 60.371 47.826 0.00 0.00 0.00 2.17
5064 12455 4.268359 GGAGGAGTCTGATGCAAGATTTT 58.732 43.478 0.00 0.00 0.00 1.82
5065 12456 4.335037 GGAGGAGTCTGATGCAAGATTTTC 59.665 45.833 0.00 0.00 0.00 2.29
5066 12457 5.176741 AGGAGTCTGATGCAAGATTTTCT 57.823 39.130 0.00 0.00 0.00 2.52
5067 12458 5.568392 AGGAGTCTGATGCAAGATTTTCTT 58.432 37.500 0.00 0.00 37.14 2.52
5068 12459 5.647225 AGGAGTCTGATGCAAGATTTTCTTC 59.353 40.000 0.00 0.00 33.78 2.87
5069 12460 5.413833 GGAGTCTGATGCAAGATTTTCTTCA 59.586 40.000 0.00 0.00 33.78 3.02
5070 12461 6.072286 GGAGTCTGATGCAAGATTTTCTTCAA 60.072 38.462 0.00 0.00 33.78 2.69
5071 12462 7.281040 AGTCTGATGCAAGATTTTCTTCAAA 57.719 32.000 0.00 0.00 33.78 2.69
5072 12463 7.893658 AGTCTGATGCAAGATTTTCTTCAAAT 58.106 30.769 0.00 0.00 33.78 2.32
5073 12464 8.365647 AGTCTGATGCAAGATTTTCTTCAAATT 58.634 29.630 0.00 0.00 33.78 1.82
5074 12465 8.985805 GTCTGATGCAAGATTTTCTTCAAATTT 58.014 29.630 0.00 0.00 33.78 1.82
5075 12466 9.550406 TCTGATGCAAGATTTTCTTCAAATTTT 57.450 25.926 0.00 0.00 33.78 1.82
5078 12469 9.731519 GATGCAAGATTTTCTTCAAATTTTACG 57.268 29.630 0.00 0.00 33.78 3.18
5079 12470 7.563270 TGCAAGATTTTCTTCAAATTTTACGC 58.437 30.769 0.00 0.00 33.78 4.42
5080 12471 6.727534 GCAAGATTTTCTTCAAATTTTACGCG 59.272 34.615 3.53 3.53 33.78 6.01
5081 12472 7.358023 GCAAGATTTTCTTCAAATTTTACGCGA 60.358 33.333 15.93 0.00 33.78 5.87
5082 12473 8.638565 CAAGATTTTCTTCAAATTTTACGCGAT 58.361 29.630 15.93 0.00 33.78 4.58
5083 12474 8.382003 AGATTTTCTTCAAATTTTACGCGATC 57.618 30.769 15.93 0.00 35.02 3.69
5084 12475 8.020819 AGATTTTCTTCAAATTTTACGCGATCA 58.979 29.630 15.93 0.00 35.02 2.92
5085 12476 7.547285 TTTTCTTCAAATTTTACGCGATCAG 57.453 32.000 15.93 0.00 0.00 2.90
5086 12477 5.216566 TCTTCAAATTTTACGCGATCAGG 57.783 39.130 15.93 0.00 0.00 3.86
5087 12478 3.398954 TCAAATTTTACGCGATCAGGC 57.601 42.857 15.93 0.00 0.00 4.85
5088 12479 2.096819 TCAAATTTTACGCGATCAGGCC 59.903 45.455 15.93 0.00 0.00 5.19
5089 12480 2.038387 AATTTTACGCGATCAGGCCT 57.962 45.000 15.93 0.00 0.00 5.19
5090 12481 1.583054 ATTTTACGCGATCAGGCCTC 58.417 50.000 15.93 0.00 0.00 4.70
5091 12482 0.248012 TTTTACGCGATCAGGCCTCA 59.752 50.000 15.93 0.00 0.00 3.86
5092 12483 0.248012 TTTACGCGATCAGGCCTCAA 59.752 50.000 15.93 0.00 0.00 3.02
5093 12484 0.248012 TTACGCGATCAGGCCTCAAA 59.752 50.000 15.93 0.00 0.00 2.69
5094 12485 0.248012 TACGCGATCAGGCCTCAAAA 59.752 50.000 15.93 0.00 0.00 2.44
5095 12486 1.021390 ACGCGATCAGGCCTCAAAAG 61.021 55.000 15.93 0.00 0.00 2.27
5096 12487 1.431036 GCGATCAGGCCTCAAAAGC 59.569 57.895 0.00 0.89 0.00 3.51
5097 12488 1.028868 GCGATCAGGCCTCAAAAGCT 61.029 55.000 0.00 0.00 0.00 3.74
5098 12489 1.457346 CGATCAGGCCTCAAAAGCTT 58.543 50.000 0.00 0.00 0.00 3.74
5099 12490 1.399791 CGATCAGGCCTCAAAAGCTTC 59.600 52.381 0.00 0.00 0.00 3.86
5100 12491 1.399791 GATCAGGCCTCAAAAGCTTCG 59.600 52.381 0.00 0.00 0.00 3.79
5101 12492 0.396435 TCAGGCCTCAAAAGCTTCGA 59.604 50.000 0.00 0.00 0.00 3.71
5102 12493 1.202758 TCAGGCCTCAAAAGCTTCGAA 60.203 47.619 0.00 0.00 0.00 3.71
5103 12494 1.068954 CAGGCCTCAAAAGCTTCGAAC 60.069 52.381 0.00 0.00 0.00 3.95
5104 12495 0.110192 GGCCTCAAAAGCTTCGAACG 60.110 55.000 0.00 0.00 0.00 3.95
5105 12496 0.110192 GCCTCAAAAGCTTCGAACGG 60.110 55.000 0.00 0.00 0.00 4.44
5106 12497 1.226746 CCTCAAAAGCTTCGAACGGT 58.773 50.000 0.00 0.00 0.00 4.83
5107 12498 2.409975 CCTCAAAAGCTTCGAACGGTA 58.590 47.619 0.00 0.00 0.00 4.02
5108 12499 2.412089 CCTCAAAAGCTTCGAACGGTAG 59.588 50.000 0.00 0.00 0.00 3.18
5109 12500 3.057734 CTCAAAAGCTTCGAACGGTAGT 58.942 45.455 0.00 0.00 0.00 2.73
5110 12501 3.460103 TCAAAAGCTTCGAACGGTAGTT 58.540 40.909 0.00 0.00 44.47 2.24
5111 12502 4.619973 TCAAAAGCTTCGAACGGTAGTTA 58.380 39.130 0.00 0.00 41.34 2.24
5112 12503 4.682860 TCAAAAGCTTCGAACGGTAGTTAG 59.317 41.667 0.00 0.00 41.34 2.34
5113 12504 3.930634 AAGCTTCGAACGGTAGTTAGT 57.069 42.857 0.00 0.00 41.34 2.24
5114 12505 3.930634 AGCTTCGAACGGTAGTTAGTT 57.069 42.857 0.00 0.00 41.34 2.24
5115 12506 3.831112 AGCTTCGAACGGTAGTTAGTTC 58.169 45.455 0.00 0.00 41.34 3.01
5116 12507 2.919859 GCTTCGAACGGTAGTTAGTTCC 59.080 50.000 0.00 0.00 42.57 3.62
5117 12508 3.505836 CTTCGAACGGTAGTTAGTTCCC 58.494 50.000 0.00 0.00 42.57 3.97
5118 12509 2.513753 TCGAACGGTAGTTAGTTCCCA 58.486 47.619 3.20 0.00 42.57 4.37
5119 12510 2.890311 TCGAACGGTAGTTAGTTCCCAA 59.110 45.455 3.20 0.00 42.57 4.12
5120 12511 3.320541 TCGAACGGTAGTTAGTTCCCAAA 59.679 43.478 3.20 0.00 42.57 3.28
5121 12512 3.429881 CGAACGGTAGTTAGTTCCCAAAC 59.570 47.826 3.20 0.00 42.57 2.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
119 120 4.320608 TTCCAGTTCAAGTTGGAATTGC 57.679 40.909 2.34 0.00 45.87 3.56
406 2958 4.821805 TGGAACAATCAAAAGACAGAGGTC 59.178 41.667 0.00 0.00 39.18 3.85
441 2993 1.439543 GATGGCCTAGGGGTCTTCAT 58.560 55.000 11.72 0.00 40.02 2.57
491 3043 2.616842 GGACGTGGTTGTGATTGACTTT 59.383 45.455 0.00 0.00 0.00 2.66
527 3089 7.598118 TGCAACGAATTTCATATGTTTGTGAAT 59.402 29.630 1.90 0.00 33.62 2.57
646 3208 2.127118 AACGGTAGTGACGCGACG 60.127 61.111 15.93 7.87 34.00 5.12
850 3437 0.397675 TGAGAGCGATGGGGAGTGAT 60.398 55.000 0.00 0.00 0.00 3.06
851 3438 1.000359 TGAGAGCGATGGGGAGTGA 60.000 57.895 0.00 0.00 0.00 3.41
854 3441 2.060383 TGGTGAGAGCGATGGGGAG 61.060 63.158 0.00 0.00 0.00 4.30
855 3442 2.038813 TGGTGAGAGCGATGGGGA 59.961 61.111 0.00 0.00 0.00 4.81
856 3443 2.187946 GTGGTGAGAGCGATGGGG 59.812 66.667 0.00 0.00 0.00 4.96
858 3445 0.463204 ATGAGTGGTGAGAGCGATGG 59.537 55.000 0.00 0.00 0.00 3.51
859 3446 1.537776 GGATGAGTGGTGAGAGCGATG 60.538 57.143 0.00 0.00 0.00 3.84
860 3447 0.749649 GGATGAGTGGTGAGAGCGAT 59.250 55.000 0.00 0.00 0.00 4.58
861 3448 1.323271 GGGATGAGTGGTGAGAGCGA 61.323 60.000 0.00 0.00 0.00 4.93
862 3449 1.142748 GGGATGAGTGGTGAGAGCG 59.857 63.158 0.00 0.00 0.00 5.03
863 3450 0.107945 GTGGGATGAGTGGTGAGAGC 60.108 60.000 0.00 0.00 0.00 4.09
864 3451 1.206610 CTGTGGGATGAGTGGTGAGAG 59.793 57.143 0.00 0.00 0.00 3.20
865 3452 1.203174 TCTGTGGGATGAGTGGTGAGA 60.203 52.381 0.00 0.00 0.00 3.27
866 3453 1.269958 TCTGTGGGATGAGTGGTGAG 58.730 55.000 0.00 0.00 0.00 3.51
867 3454 1.956869 ATCTGTGGGATGAGTGGTGA 58.043 50.000 0.00 0.00 32.69 4.02
868 3455 2.795231 AATCTGTGGGATGAGTGGTG 57.205 50.000 0.00 0.00 34.45 4.17
869 3456 2.915604 AGAAATCTGTGGGATGAGTGGT 59.084 45.455 0.00 0.00 34.45 4.16
870 3457 3.539604 GAGAAATCTGTGGGATGAGTGG 58.460 50.000 0.00 0.00 34.45 4.00
871 3458 3.539604 GGAGAAATCTGTGGGATGAGTG 58.460 50.000 0.00 0.00 34.45 3.51
872 3459 2.507471 GGGAGAAATCTGTGGGATGAGT 59.493 50.000 0.00 0.00 34.45 3.41
912 3499 5.654497 GGAAAGGTGATTGATTAAAGGCTG 58.346 41.667 0.00 0.00 0.00 4.85
913 3500 4.399303 CGGAAAGGTGATTGATTAAAGGCT 59.601 41.667 0.00 0.00 0.00 4.58
927 3514 3.737172 CTTGGCCGCGGAAAGGTG 61.737 66.667 33.48 9.21 0.00 4.00
928 3515 3.485346 TTCTTGGCCGCGGAAAGGT 62.485 57.895 33.48 0.00 0.00 3.50
931 3518 3.361977 GCTTCTTGGCCGCGGAAA 61.362 61.111 33.48 21.21 0.00 3.13
934 3521 3.804193 GAAGCTTCTTGGCCGCGG 61.804 66.667 24.05 24.05 0.00 6.46
939 3526 1.387539 GATCCTGGAAGCTTCTTGGC 58.612 55.000 25.05 9.74 0.00 4.52
987 3574 1.303888 CACCATGGCTGGAGCAAGT 60.304 57.895 13.04 0.00 46.37 3.16
1579 4172 1.592223 CCTTCTTCTCTTCCGCGGT 59.408 57.895 27.15 0.00 0.00 5.68
1679 4273 2.556287 CGTCTTTGGGCTTGTCGC 59.444 61.111 0.00 0.00 38.13 5.19
1680 4274 3.253955 CCGTCTTTGGGCTTGTCG 58.746 61.111 0.00 0.00 0.00 4.35
1687 4281 2.966309 GCTTGTCGCCGTCTTTGGG 61.966 63.158 0.00 0.00 0.00 4.12
1688 4282 2.556287 GCTTGTCGCCGTCTTTGG 59.444 61.111 0.00 0.00 0.00 3.28
1734 4346 4.373116 GACGGAGAAGGCGGCACA 62.373 66.667 13.08 0.00 0.00 4.57
1878 4490 2.882876 CGGTCCACCAGGTCGTAG 59.117 66.667 0.00 0.00 35.89 3.51
2373 4994 3.247424 CCATAGCTTGGGGGAGAGA 57.753 57.895 0.00 0.00 42.33 3.10
2931 5562 1.068588 CCGTCCTTGGCGATCTTCATA 59.931 52.381 0.00 0.00 29.41 2.15
3012 5643 0.744414 ATTGGTCGAGAATGGTGCGG 60.744 55.000 0.00 0.00 0.00 5.69
3021 5652 0.672401 GCGGGTTGAATTGGTCGAGA 60.672 55.000 0.00 0.00 0.00 4.04
3030 5661 2.033448 TTCCAGCGCGGGTTGAAT 59.967 55.556 26.04 0.00 34.36 2.57
3127 5758 2.660802 GTCCTTCTTTCCGGGCGA 59.339 61.111 0.00 0.00 0.00 5.54
3128 5759 2.813908 CGTCCTTCTTTCCGGGCG 60.814 66.667 0.00 0.00 42.39 6.13
3130 5761 2.436115 GGCGTCCTTCTTTCCGGG 60.436 66.667 0.00 0.00 0.00 5.73
3134 5765 1.706287 GATGCGGGCGTCCTTCTTTC 61.706 60.000 3.66 0.00 0.00 2.62
3135 5766 1.745489 GATGCGGGCGTCCTTCTTT 60.745 57.895 3.66 0.00 0.00 2.52
3136 5767 2.125106 GATGCGGGCGTCCTTCTT 60.125 61.111 3.66 0.00 0.00 2.52
3137 5768 4.514577 CGATGCGGGCGTCCTTCT 62.515 66.667 3.66 0.00 0.00 2.85
3195 5844 2.355132 CGCGTAGTTGATGGAGTAGACT 59.645 50.000 0.00 0.00 0.00 3.24
3555 6207 1.687840 CACCCGATGACCCCACCTA 60.688 63.158 0.00 0.00 0.00 3.08
4074 6768 1.305930 GGCGGCGGAAGAAGTTGAAT 61.306 55.000 9.78 0.00 0.00 2.57
4163 6861 3.426695 GCAATGGATCAGTACAGCAACAC 60.427 47.826 0.00 0.00 0.00 3.32
4176 6878 1.065928 GCAGCAGCAGCAATGGATC 59.934 57.895 4.63 0.00 45.49 3.36
4177 6879 1.379977 AGCAGCAGCAGCAATGGAT 60.380 52.632 12.92 0.00 45.49 3.41
4178 6880 2.035155 AGCAGCAGCAGCAATGGA 59.965 55.556 12.92 0.00 45.49 3.41
4179 6881 2.181777 CAGCAGCAGCAGCAATGG 59.818 61.111 12.92 0.00 45.49 3.16
4186 6888 1.673337 CCACTAAGCAGCAGCAGCA 60.673 57.895 12.92 0.00 45.49 4.41
4216 6920 6.762187 TCTGTGTGCAAACAAATGATCAAATT 59.238 30.769 11.68 0.00 0.00 1.82
4403 7255 7.187824 TCTTCAGGAAGCTGTAGAATGTATT 57.812 36.000 4.15 0.00 38.28 1.89
4420 7272 7.269477 ACACATCTTCTTTCTTTTCTTCAGG 57.731 36.000 0.00 0.00 0.00 3.86
4446 7300 5.220381 GTGCATTGATAAGCCATGAAGATG 58.780 41.667 0.00 0.00 0.00 2.90
4461 7315 3.678289 AGCAGTAGAATGTGTGCATTGA 58.322 40.909 0.00 0.00 44.61 2.57
4503 7358 1.218763 CGAGCCTGCAAGATGATCAG 58.781 55.000 0.09 0.00 34.07 2.90
4504 7359 0.812811 GCGAGCCTGCAAGATGATCA 60.813 55.000 0.00 0.00 34.07 2.92
4509 7364 2.437359 GTGGCGAGCCTGCAAGAT 60.437 61.111 15.75 0.00 34.07 2.40
4522 11366 1.664151 GTGCGATTAGGTAAGTGTGGC 59.336 52.381 0.00 0.00 0.00 5.01
4523 11367 2.671396 GTGTGCGATTAGGTAAGTGTGG 59.329 50.000 0.00 0.00 0.00 4.17
4525 11369 2.300723 TGGTGTGCGATTAGGTAAGTGT 59.699 45.455 0.00 0.00 0.00 3.55
4530 11374 3.765511 AGTAAGTGGTGTGCGATTAGGTA 59.234 43.478 0.00 0.00 0.00 3.08
4605 11525 4.941657 TGCATAGATCTCAGTGACACATC 58.058 43.478 8.59 2.01 0.00 3.06
4615 11535 3.198417 TCAACAAGGCTGCATAGATCTCA 59.802 43.478 0.00 0.00 0.00 3.27
4616 11536 3.559242 GTCAACAAGGCTGCATAGATCTC 59.441 47.826 0.00 0.00 0.00 2.75
4617 11537 3.054875 TGTCAACAAGGCTGCATAGATCT 60.055 43.478 0.00 0.00 0.00 2.75
4619 11539 3.012518 GTGTCAACAAGGCTGCATAGAT 58.987 45.455 0.50 0.00 0.00 1.98
4620 11540 2.038952 AGTGTCAACAAGGCTGCATAGA 59.961 45.455 0.50 0.00 0.00 1.98
4621 11541 2.161012 CAGTGTCAACAAGGCTGCATAG 59.839 50.000 0.50 0.00 0.00 2.23
4622 11542 2.153645 CAGTGTCAACAAGGCTGCATA 58.846 47.619 0.50 0.00 0.00 3.14
4623 11543 0.956633 CAGTGTCAACAAGGCTGCAT 59.043 50.000 0.50 0.00 0.00 3.96
4625 11545 0.590195 CTCAGTGTCAACAAGGCTGC 59.410 55.000 0.00 0.00 0.00 5.25
4626 11546 1.233019 CCTCAGTGTCAACAAGGCTG 58.767 55.000 0.00 0.00 0.00 4.85
4627 11547 0.839946 ACCTCAGTGTCAACAAGGCT 59.160 50.000 0.28 0.00 35.78 4.58
4628 11548 0.947244 CACCTCAGTGTCAACAAGGC 59.053 55.000 0.28 0.00 39.30 4.35
4629 11549 2.487934 CTCACCTCAGTGTCAACAAGG 58.512 52.381 0.00 0.00 44.83 3.61
4630 11550 1.869767 GCTCACCTCAGTGTCAACAAG 59.130 52.381 0.00 0.00 44.83 3.16
4680 12059 2.223947 TGCACGTGAAGACTCTGCTAAA 60.224 45.455 22.23 0.00 0.00 1.85
4692 12071 0.313672 GGAAAAGGCATGCACGTGAA 59.686 50.000 22.23 10.11 0.00 3.18
4725 12116 1.943340 GTCCGAAATCCTGAATCCTGC 59.057 52.381 0.00 0.00 0.00 4.85
4747 12138 9.264719 CCAAGCAAATGAATTTCTCTAGTTTTT 57.735 29.630 0.00 0.00 0.00 1.94
4748 12139 7.874528 CCCAAGCAAATGAATTTCTCTAGTTTT 59.125 33.333 0.00 0.00 0.00 2.43
4749 12140 7.381323 CCCAAGCAAATGAATTTCTCTAGTTT 58.619 34.615 0.00 0.00 0.00 2.66
4750 12141 6.573094 GCCCAAGCAAATGAATTTCTCTAGTT 60.573 38.462 0.00 0.00 39.53 2.24
4751 12142 5.105595 GCCCAAGCAAATGAATTTCTCTAGT 60.106 40.000 0.00 0.00 39.53 2.57
4752 12143 5.126707 AGCCCAAGCAAATGAATTTCTCTAG 59.873 40.000 0.00 0.00 43.56 2.43
4753 12144 5.018809 AGCCCAAGCAAATGAATTTCTCTA 58.981 37.500 0.00 0.00 43.56 2.43
4754 12145 3.836562 AGCCCAAGCAAATGAATTTCTCT 59.163 39.130 0.00 0.00 43.56 3.10
4755 12146 4.179298 GAGCCCAAGCAAATGAATTTCTC 58.821 43.478 0.00 0.00 43.56 2.87
4756 12147 3.579586 TGAGCCCAAGCAAATGAATTTCT 59.420 39.130 0.00 0.00 43.56 2.52
4757 12148 3.929094 TGAGCCCAAGCAAATGAATTTC 58.071 40.909 0.00 0.00 43.56 2.17
4758 12149 4.563140 ATGAGCCCAAGCAAATGAATTT 57.437 36.364 0.00 0.00 43.56 1.82
4759 12150 5.881923 ATATGAGCCCAAGCAAATGAATT 57.118 34.783 0.00 0.00 43.56 2.17
4760 12151 5.834742 TGTATATGAGCCCAAGCAAATGAAT 59.165 36.000 0.00 0.00 43.56 2.57
4761 12152 5.067674 GTGTATATGAGCCCAAGCAAATGAA 59.932 40.000 0.00 0.00 43.56 2.57
4762 12153 4.580167 GTGTATATGAGCCCAAGCAAATGA 59.420 41.667 0.00 0.00 43.56 2.57
4763 12154 4.555313 CGTGTATATGAGCCCAAGCAAATG 60.555 45.833 0.00 0.00 43.56 2.32
4764 12155 3.565482 CGTGTATATGAGCCCAAGCAAAT 59.435 43.478 0.00 0.00 43.56 2.32
4765 12156 2.942376 CGTGTATATGAGCCCAAGCAAA 59.058 45.455 0.00 0.00 43.56 3.68
4766 12157 2.093181 ACGTGTATATGAGCCCAAGCAA 60.093 45.455 0.00 0.00 43.56 3.91
4767 12158 1.484653 ACGTGTATATGAGCCCAAGCA 59.515 47.619 0.00 0.00 43.56 3.91
4768 12159 2.240493 ACGTGTATATGAGCCCAAGC 57.760 50.000 0.00 0.00 40.32 4.01
4769 12160 4.585955 ACTACGTGTATATGAGCCCAAG 57.414 45.455 0.00 0.00 0.00 3.61
4770 12161 4.023792 CGTACTACGTGTATATGAGCCCAA 60.024 45.833 0.00 0.00 36.74 4.12
4771 12162 3.499537 CGTACTACGTGTATATGAGCCCA 59.500 47.826 0.00 0.00 36.74 5.36
4772 12163 4.075763 CGTACTACGTGTATATGAGCCC 57.924 50.000 0.00 0.00 36.74 5.19
4786 12177 1.403323 GGTGCTCCCAGTACGTACTAC 59.597 57.143 26.95 19.33 34.13 2.73
4787 12178 1.283029 AGGTGCTCCCAGTACGTACTA 59.717 52.381 26.95 11.87 34.13 1.82
4788 12179 0.039326 AGGTGCTCCCAGTACGTACT 59.961 55.000 22.45 22.45 36.90 2.73
4789 12180 0.172803 CAGGTGCTCCCAGTACGTAC 59.827 60.000 18.10 18.10 31.17 3.67
4790 12181 1.601419 GCAGGTGCTCCCAGTACGTA 61.601 60.000 0.00 0.00 38.21 3.57
4791 12182 2.943978 GCAGGTGCTCCCAGTACGT 61.944 63.158 0.00 0.00 38.21 3.57
4792 12183 2.125512 GCAGGTGCTCCCAGTACG 60.126 66.667 0.00 0.00 38.21 3.67
4793 12184 1.078848 CTGCAGGTGCTCCCAGTAC 60.079 63.158 5.57 0.00 42.66 2.73
4794 12185 2.293318 CCTGCAGGTGCTCCCAGTA 61.293 63.158 25.53 0.00 42.66 2.74
4795 12186 3.644606 CCTGCAGGTGCTCCCAGT 61.645 66.667 25.53 0.00 42.66 4.00
4796 12187 4.421515 CCCTGCAGGTGCTCCCAG 62.422 72.222 30.63 9.48 42.66 4.45
4797 12188 4.980592 TCCCTGCAGGTGCTCCCA 62.981 66.667 30.63 3.95 42.66 4.37
4798 12189 2.713531 TTTTCCCTGCAGGTGCTCCC 62.714 60.000 30.63 0.00 42.66 4.30
4799 12190 0.613012 ATTTTCCCTGCAGGTGCTCC 60.613 55.000 30.63 0.00 42.66 4.70
4800 12191 0.813821 GATTTTCCCTGCAGGTGCTC 59.186 55.000 30.63 15.53 42.66 4.26
4801 12192 0.112995 TGATTTTCCCTGCAGGTGCT 59.887 50.000 30.63 10.86 42.66 4.40
4802 12193 1.134907 CATGATTTTCCCTGCAGGTGC 60.135 52.381 30.63 13.26 42.50 5.01
4803 12194 1.479323 CCATGATTTTCCCTGCAGGTG 59.521 52.381 30.63 21.43 36.75 4.00
4804 12195 1.856629 CCATGATTTTCCCTGCAGGT 58.143 50.000 30.63 12.59 36.75 4.00
4805 12196 0.462789 GCCATGATTTTCCCTGCAGG 59.537 55.000 26.87 26.87 0.00 4.85
4806 12197 1.481871 AGCCATGATTTTCCCTGCAG 58.518 50.000 6.78 6.78 0.00 4.41
4807 12198 1.551430 CAAGCCATGATTTTCCCTGCA 59.449 47.619 0.00 0.00 0.00 4.41
4808 12199 1.741394 GCAAGCCATGATTTTCCCTGC 60.741 52.381 0.00 0.00 0.00 4.85
4809 12200 1.470285 CGCAAGCCATGATTTTCCCTG 60.470 52.381 0.00 0.00 0.00 4.45
4810 12201 0.819582 CGCAAGCCATGATTTTCCCT 59.180 50.000 0.00 0.00 0.00 4.20
4811 12202 0.179103 CCGCAAGCCATGATTTTCCC 60.179 55.000 0.00 0.00 0.00 3.97
4812 12203 0.807275 GCCGCAAGCCATGATTTTCC 60.807 55.000 0.00 0.00 34.35 3.13
4813 12204 0.108709 TGCCGCAAGCCATGATTTTC 60.109 50.000 0.00 0.00 42.71 2.29
4814 12205 0.108520 CTGCCGCAAGCCATGATTTT 60.109 50.000 0.00 0.00 42.71 1.82
4815 12206 1.514087 CTGCCGCAAGCCATGATTT 59.486 52.632 0.00 0.00 42.71 2.17
4816 12207 3.072486 GCTGCCGCAAGCCATGATT 62.072 57.895 0.00 0.00 42.71 2.57
4817 12208 3.524606 GCTGCCGCAAGCCATGAT 61.525 61.111 0.00 0.00 42.71 2.45
4834 12225 4.087892 CTCCCAGTCCCGCTGTGG 62.088 72.222 0.00 0.00 43.55 4.17
4835 12226 3.314331 ACTCCCAGTCCCGCTGTG 61.314 66.667 0.00 0.00 43.55 3.66
4836 12227 3.314331 CACTCCCAGTCCCGCTGT 61.314 66.667 0.00 0.00 43.55 4.40
4837 12228 2.997315 TCACTCCCAGTCCCGCTG 60.997 66.667 0.00 0.00 44.63 5.18
4838 12229 2.681778 CTCACTCCCAGTCCCGCT 60.682 66.667 0.00 0.00 0.00 5.52
4839 12230 3.775654 CCTCACTCCCAGTCCCGC 61.776 72.222 0.00 0.00 0.00 6.13
4840 12231 1.609501 TTCCTCACTCCCAGTCCCG 60.610 63.158 0.00 0.00 0.00 5.14
4841 12232 0.545548 AGTTCCTCACTCCCAGTCCC 60.546 60.000 0.00 0.00 0.00 4.46
4842 12233 0.610687 CAGTTCCTCACTCCCAGTCC 59.389 60.000 0.00 0.00 30.92 3.85
4843 12234 0.610687 CCAGTTCCTCACTCCCAGTC 59.389 60.000 0.00 0.00 30.92 3.51
4844 12235 1.484444 GCCAGTTCCTCACTCCCAGT 61.484 60.000 0.00 0.00 30.92 4.00
4845 12236 1.298014 GCCAGTTCCTCACTCCCAG 59.702 63.158 0.00 0.00 30.92 4.45
4846 12237 1.461268 TGCCAGTTCCTCACTCCCA 60.461 57.895 0.00 0.00 30.92 4.37
4847 12238 1.298014 CTGCCAGTTCCTCACTCCC 59.702 63.158 0.00 0.00 30.92 4.30
4848 12239 1.298014 CCTGCCAGTTCCTCACTCC 59.702 63.158 0.00 0.00 30.92 3.85
4849 12240 1.205893 CTACCTGCCAGTTCCTCACTC 59.794 57.143 0.00 0.00 30.92 3.51
4850 12241 1.270907 CTACCTGCCAGTTCCTCACT 58.729 55.000 0.00 0.00 35.35 3.41
4851 12242 0.977395 ACTACCTGCCAGTTCCTCAC 59.023 55.000 0.00 0.00 0.00 3.51
4852 12243 0.976641 CACTACCTGCCAGTTCCTCA 59.023 55.000 0.00 0.00 0.00 3.86
4853 12244 1.205893 CTCACTACCTGCCAGTTCCTC 59.794 57.143 0.00 0.00 0.00 3.71
4854 12245 1.270907 CTCACTACCTGCCAGTTCCT 58.729 55.000 0.00 0.00 0.00 3.36
4855 12246 0.977395 ACTCACTACCTGCCAGTTCC 59.023 55.000 0.00 0.00 0.00 3.62
4856 12247 1.338200 CCACTCACTACCTGCCAGTTC 60.338 57.143 0.00 0.00 0.00 3.01
4857 12248 0.687354 CCACTCACTACCTGCCAGTT 59.313 55.000 0.00 0.00 0.00 3.16
4858 12249 1.194781 CCCACTCACTACCTGCCAGT 61.195 60.000 0.00 0.00 0.00 4.00
4859 12250 1.194781 ACCCACTCACTACCTGCCAG 61.195 60.000 0.00 0.00 0.00 4.85
4860 12251 1.152118 ACCCACTCACTACCTGCCA 60.152 57.895 0.00 0.00 0.00 4.92
4861 12252 1.296715 CACCCACTCACTACCTGCC 59.703 63.158 0.00 0.00 0.00 4.85
4862 12253 1.376037 GCACCCACTCACTACCTGC 60.376 63.158 0.00 0.00 0.00 4.85
4863 12254 1.079819 CGCACCCACTCACTACCTG 60.080 63.158 0.00 0.00 0.00 4.00
4864 12255 1.533273 ACGCACCCACTCACTACCT 60.533 57.895 0.00 0.00 0.00 3.08
4865 12256 1.374252 CACGCACCCACTCACTACC 60.374 63.158 0.00 0.00 0.00 3.18
4866 12257 0.246635 ATCACGCACCCACTCACTAC 59.753 55.000 0.00 0.00 0.00 2.73
4867 12258 0.530744 GATCACGCACCCACTCACTA 59.469 55.000 0.00 0.00 0.00 2.74
4868 12259 1.293498 GATCACGCACCCACTCACT 59.707 57.895 0.00 0.00 0.00 3.41
4869 12260 1.741770 GGATCACGCACCCACTCAC 60.742 63.158 0.00 0.00 0.00 3.51
4870 12261 1.913262 AGGATCACGCACCCACTCA 60.913 57.895 0.00 0.00 0.00 3.41
4871 12262 1.448540 CAGGATCACGCACCCACTC 60.449 63.158 0.00 0.00 0.00 3.51
4872 12263 2.217038 ACAGGATCACGCACCCACT 61.217 57.895 0.00 0.00 0.00 4.00
4873 12264 2.034879 CACAGGATCACGCACCCAC 61.035 63.158 0.00 0.00 0.00 4.61
4874 12265 2.347114 CACAGGATCACGCACCCA 59.653 61.111 0.00 0.00 0.00 4.51
4875 12266 3.127533 GCACAGGATCACGCACCC 61.128 66.667 0.00 0.00 0.00 4.61
4876 12267 3.490759 CGCACAGGATCACGCACC 61.491 66.667 0.00 0.00 0.00 5.01
4890 12281 0.454789 CATCATTTTCAGTGCGCGCA 60.455 50.000 33.09 33.09 0.00 6.09
4891 12282 0.454957 ACATCATTTTCAGTGCGCGC 60.455 50.000 27.26 27.26 0.00 6.86
4892 12283 1.136000 TCACATCATTTTCAGTGCGCG 60.136 47.619 0.00 0.00 32.25 6.86
4893 12284 2.245096 GTCACATCATTTTCAGTGCGC 58.755 47.619 0.00 0.00 32.25 6.09
4894 12285 2.498905 CGTCACATCATTTTCAGTGCG 58.501 47.619 0.00 0.00 32.25 5.34
4895 12286 2.855180 CCGTCACATCATTTTCAGTGC 58.145 47.619 0.00 0.00 32.25 4.40
4896 12287 2.414559 GGCCGTCACATCATTTTCAGTG 60.415 50.000 0.00 0.00 0.00 3.66
4897 12288 1.812571 GGCCGTCACATCATTTTCAGT 59.187 47.619 0.00 0.00 0.00 3.41
4898 12289 2.086869 AGGCCGTCACATCATTTTCAG 58.913 47.619 0.00 0.00 0.00 3.02
4899 12290 1.811965 CAGGCCGTCACATCATTTTCA 59.188 47.619 0.00 0.00 0.00 2.69
4900 12291 2.083774 TCAGGCCGTCACATCATTTTC 58.916 47.619 0.00 0.00 0.00 2.29
4901 12292 2.198827 TCAGGCCGTCACATCATTTT 57.801 45.000 0.00 0.00 0.00 1.82
4902 12293 2.092753 AGATCAGGCCGTCACATCATTT 60.093 45.455 0.00 0.00 0.00 2.32
4903 12294 1.487976 AGATCAGGCCGTCACATCATT 59.512 47.619 0.00 0.00 0.00 2.57
4904 12295 1.126488 AGATCAGGCCGTCACATCAT 58.874 50.000 0.00 0.00 0.00 2.45
4905 12296 1.683385 CTAGATCAGGCCGTCACATCA 59.317 52.381 0.00 0.00 0.00 3.07
4906 12297 1.000283 CCTAGATCAGGCCGTCACATC 60.000 57.143 0.00 0.00 37.70 3.06
4907 12298 1.043816 CCTAGATCAGGCCGTCACAT 58.956 55.000 0.00 0.00 37.70 3.21
4908 12299 0.033503 TCCTAGATCAGGCCGTCACA 60.034 55.000 0.00 0.00 45.10 3.58
4909 12300 1.333177 ATCCTAGATCAGGCCGTCAC 58.667 55.000 0.00 0.00 45.10 3.67
4910 12301 2.555448 CCTATCCTAGATCAGGCCGTCA 60.555 54.545 0.00 0.00 45.10 4.35
4911 12302 2.096248 CCTATCCTAGATCAGGCCGTC 58.904 57.143 0.00 0.00 45.10 4.79
4912 12303 1.711375 TCCTATCCTAGATCAGGCCGT 59.289 52.381 0.00 0.00 45.10 5.68
4913 12304 2.374184 CTCCTATCCTAGATCAGGCCG 58.626 57.143 0.00 0.00 45.10 6.13
4914 12305 2.107366 GCTCCTATCCTAGATCAGGCC 58.893 57.143 0.00 0.00 45.10 5.19
4915 12306 3.023832 GAGCTCCTATCCTAGATCAGGC 58.976 54.545 0.87 0.00 45.10 4.85
4917 12308 2.682856 GCGAGCTCCTATCCTAGATCAG 59.317 54.545 8.47 0.00 0.00 2.90
4918 12309 2.619332 GGCGAGCTCCTATCCTAGATCA 60.619 54.545 8.47 0.00 0.00 2.92
4919 12310 2.021457 GGCGAGCTCCTATCCTAGATC 58.979 57.143 8.47 0.00 0.00 2.75
4920 12311 1.638589 AGGCGAGCTCCTATCCTAGAT 59.361 52.381 8.47 0.00 33.95 1.98
4921 12312 1.068948 AGGCGAGCTCCTATCCTAGA 58.931 55.000 8.47 0.00 33.95 2.43
4922 12313 1.917872 AAGGCGAGCTCCTATCCTAG 58.082 55.000 8.47 0.00 34.82 3.02
4923 12314 2.383442 AAAGGCGAGCTCCTATCCTA 57.617 50.000 8.47 0.00 34.82 2.94
4924 12315 1.414550 GAAAAGGCGAGCTCCTATCCT 59.585 52.381 8.47 6.89 34.82 3.24
4925 12316 1.870167 CGAAAAGGCGAGCTCCTATCC 60.870 57.143 8.47 4.54 34.82 2.59
4926 12317 1.202428 ACGAAAAGGCGAGCTCCTATC 60.202 52.381 8.47 2.97 34.82 2.08
4927 12318 0.824759 ACGAAAAGGCGAGCTCCTAT 59.175 50.000 8.47 0.00 34.82 2.57
4928 12319 0.108804 CACGAAAAGGCGAGCTCCTA 60.109 55.000 8.47 0.00 34.82 2.94
4929 12320 1.374758 CACGAAAAGGCGAGCTCCT 60.375 57.895 8.47 0.00 38.31 3.69
4930 12321 0.949105 TTCACGAAAAGGCGAGCTCC 60.949 55.000 8.47 0.47 34.83 4.70
4931 12322 0.440371 CTTCACGAAAAGGCGAGCTC 59.560 55.000 2.73 2.73 34.83 4.09
4932 12323 1.569479 GCTTCACGAAAAGGCGAGCT 61.569 55.000 0.00 0.00 34.83 4.09
4933 12324 1.154395 GCTTCACGAAAAGGCGAGC 60.154 57.895 0.00 0.00 34.83 5.03
4934 12325 0.440371 GAGCTTCACGAAAAGGCGAG 59.560 55.000 0.00 0.00 34.83 5.03
4935 12326 0.249699 TGAGCTTCACGAAAAGGCGA 60.250 50.000 0.00 0.00 34.83 5.54
4936 12327 0.586319 TTGAGCTTCACGAAAAGGCG 59.414 50.000 0.00 0.00 37.29 5.52
4937 12328 2.033424 ACTTTGAGCTTCACGAAAAGGC 59.967 45.455 0.00 0.00 32.76 4.35
4938 12329 3.065371 ACACTTTGAGCTTCACGAAAAGG 59.935 43.478 0.00 0.00 32.76 3.11
4939 12330 4.278678 ACACTTTGAGCTTCACGAAAAG 57.721 40.909 0.00 0.00 33.95 2.27
4940 12331 4.695217 AACACTTTGAGCTTCACGAAAA 57.305 36.364 0.00 0.00 0.00 2.29
4941 12332 4.695217 AAACACTTTGAGCTTCACGAAA 57.305 36.364 0.00 0.00 0.00 3.46
4942 12333 5.758296 AGATAAACACTTTGAGCTTCACGAA 59.242 36.000 0.00 0.00 0.00 3.85
4943 12334 5.297547 AGATAAACACTTTGAGCTTCACGA 58.702 37.500 0.00 0.00 0.00 4.35
4944 12335 5.597813 AGATAAACACTTTGAGCTTCACG 57.402 39.130 0.00 0.00 0.00 4.35
4945 12336 6.729187 ACAAGATAAACACTTTGAGCTTCAC 58.271 36.000 0.00 0.00 0.00 3.18
4946 12337 6.292865 CGACAAGATAAACACTTTGAGCTTCA 60.293 38.462 0.00 0.00 0.00 3.02
4947 12338 6.074005 CGACAAGATAAACACTTTGAGCTTC 58.926 40.000 0.00 0.00 0.00 3.86
4948 12339 5.049405 CCGACAAGATAAACACTTTGAGCTT 60.049 40.000 0.00 0.00 0.00 3.74
4949 12340 4.452455 CCGACAAGATAAACACTTTGAGCT 59.548 41.667 0.00 0.00 0.00 4.09
4950 12341 4.378459 CCCGACAAGATAAACACTTTGAGC 60.378 45.833 0.00 0.00 0.00 4.26
4951 12342 4.755123 ACCCGACAAGATAAACACTTTGAG 59.245 41.667 0.00 0.00 0.00 3.02
4952 12343 4.513692 CACCCGACAAGATAAACACTTTGA 59.486 41.667 0.00 0.00 0.00 2.69
4953 12344 4.320202 CCACCCGACAAGATAAACACTTTG 60.320 45.833 0.00 0.00 0.00 2.77
4954 12345 3.818773 CCACCCGACAAGATAAACACTTT 59.181 43.478 0.00 0.00 0.00 2.66
4955 12346 3.408634 CCACCCGACAAGATAAACACTT 58.591 45.455 0.00 0.00 0.00 3.16
4956 12347 2.290071 CCCACCCGACAAGATAAACACT 60.290 50.000 0.00 0.00 0.00 3.55
4957 12348 2.081462 CCCACCCGACAAGATAAACAC 58.919 52.381 0.00 0.00 0.00 3.32
4958 12349 1.612199 GCCCACCCGACAAGATAAACA 60.612 52.381 0.00 0.00 0.00 2.83
4959 12350 1.092348 GCCCACCCGACAAGATAAAC 58.908 55.000 0.00 0.00 0.00 2.01
4960 12351 0.988832 AGCCCACCCGACAAGATAAA 59.011 50.000 0.00 0.00 0.00 1.40
4961 12352 0.251916 CAGCCCACCCGACAAGATAA 59.748 55.000 0.00 0.00 0.00 1.75
4962 12353 0.907704 ACAGCCCACCCGACAAGATA 60.908 55.000 0.00 0.00 0.00 1.98
4963 12354 1.779061 AACAGCCCACCCGACAAGAT 61.779 55.000 0.00 0.00 0.00 2.40
4964 12355 1.990160 AAACAGCCCACCCGACAAGA 61.990 55.000 0.00 0.00 0.00 3.02
4965 12356 1.106944 AAAACAGCCCACCCGACAAG 61.107 55.000 0.00 0.00 0.00 3.16
4966 12357 0.684805 AAAAACAGCCCACCCGACAA 60.685 50.000 0.00 0.00 0.00 3.18
4967 12358 1.076632 AAAAACAGCCCACCCGACA 60.077 52.632 0.00 0.00 0.00 4.35
4968 12359 3.850508 AAAAACAGCCCACCCGAC 58.149 55.556 0.00 0.00 0.00 4.79
4989 12380 2.864343 CGTTACAGATGGATTCCGTTCC 59.136 50.000 0.00 0.00 36.24 3.62
4990 12381 2.864343 CCGTTACAGATGGATTCCGTTC 59.136 50.000 0.00 0.00 36.44 3.95
4991 12382 2.235402 ACCGTTACAGATGGATTCCGTT 59.765 45.455 0.00 0.00 37.88 4.44
4992 12383 1.829222 ACCGTTACAGATGGATTCCGT 59.171 47.619 0.00 0.00 37.88 4.69
4993 12384 2.596904 ACCGTTACAGATGGATTCCG 57.403 50.000 0.00 0.00 37.88 4.30
4994 12385 3.606687 ACAACCGTTACAGATGGATTCC 58.393 45.455 0.00 0.00 37.88 3.01
4995 12386 6.920569 ATAACAACCGTTACAGATGGATTC 57.079 37.500 0.00 0.00 40.35 2.52
4996 12387 7.012044 GCTAATAACAACCGTTACAGATGGATT 59.988 37.037 0.00 0.00 40.35 3.01
4997 12388 6.482308 GCTAATAACAACCGTTACAGATGGAT 59.518 38.462 0.00 0.00 40.35 3.41
4998 12389 5.813672 GCTAATAACAACCGTTACAGATGGA 59.186 40.000 0.00 0.00 40.35 3.41
4999 12390 5.815740 AGCTAATAACAACCGTTACAGATGG 59.184 40.000 0.00 0.00 40.35 3.51
5000 12391 6.903883 AGCTAATAACAACCGTTACAGATG 57.096 37.500 0.00 0.00 40.35 2.90
5001 12392 7.549839 TGTAGCTAATAACAACCGTTACAGAT 58.450 34.615 0.00 0.00 40.35 2.90
5002 12393 6.923012 TGTAGCTAATAACAACCGTTACAGA 58.077 36.000 0.00 0.00 40.35 3.41
5003 12394 6.810182 ACTGTAGCTAATAACAACCGTTACAG 59.190 38.462 0.00 0.00 40.35 2.74
5004 12395 6.690530 ACTGTAGCTAATAACAACCGTTACA 58.309 36.000 0.00 0.00 40.35 2.41
5005 12396 7.754924 TGTACTGTAGCTAATAACAACCGTTAC 59.245 37.037 0.00 0.00 40.35 2.50
5006 12397 7.754924 GTGTACTGTAGCTAATAACAACCGTTA 59.245 37.037 0.00 0.00 41.73 3.18
5007 12398 6.587608 GTGTACTGTAGCTAATAACAACCGTT 59.412 38.462 0.00 0.00 39.24 4.44
5008 12399 6.071728 AGTGTACTGTAGCTAATAACAACCGT 60.072 38.462 0.00 0.00 0.00 4.83
5009 12400 6.327934 AGTGTACTGTAGCTAATAACAACCG 58.672 40.000 0.00 0.00 0.00 4.44
5010 12401 8.465201 ACTAGTGTACTGTAGCTAATAACAACC 58.535 37.037 0.00 0.00 0.00 3.77
5011 12402 9.852091 AACTAGTGTACTGTAGCTAATAACAAC 57.148 33.333 0.00 0.00 0.00 3.32
5013 12404 9.234827 TGAACTAGTGTACTGTAGCTAATAACA 57.765 33.333 0.00 0.00 0.00 2.41
5014 12405 9.719279 CTGAACTAGTGTACTGTAGCTAATAAC 57.281 37.037 0.00 0.00 0.00 1.89
5015 12406 8.900781 CCTGAACTAGTGTACTGTAGCTAATAA 58.099 37.037 0.00 0.00 0.00 1.40
5016 12407 7.501559 CCCTGAACTAGTGTACTGTAGCTAATA 59.498 40.741 0.00 0.00 0.00 0.98
5017 12408 6.321690 CCCTGAACTAGTGTACTGTAGCTAAT 59.678 42.308 0.00 0.00 0.00 1.73
5018 12409 5.651139 CCCTGAACTAGTGTACTGTAGCTAA 59.349 44.000 0.00 0.00 0.00 3.09
5019 12410 5.191426 CCCTGAACTAGTGTACTGTAGCTA 58.809 45.833 0.00 0.00 0.00 3.32
5020 12411 4.017808 CCCTGAACTAGTGTACTGTAGCT 58.982 47.826 0.00 0.00 0.00 3.32
5021 12412 3.130693 CCCCTGAACTAGTGTACTGTAGC 59.869 52.174 0.00 0.00 0.00 3.58
5022 12413 4.597004 TCCCCTGAACTAGTGTACTGTAG 58.403 47.826 0.00 0.00 0.00 2.74
5023 12414 4.569228 CCTCCCCTGAACTAGTGTACTGTA 60.569 50.000 0.00 0.00 0.00 2.74
5024 12415 3.432378 CTCCCCTGAACTAGTGTACTGT 58.568 50.000 0.00 0.00 0.00 3.55
5025 12416 2.761208 CCTCCCCTGAACTAGTGTACTG 59.239 54.545 0.00 0.00 0.00 2.74
5026 12417 2.653366 TCCTCCCCTGAACTAGTGTACT 59.347 50.000 0.00 0.00 0.00 2.73
5027 12418 3.025262 CTCCTCCCCTGAACTAGTGTAC 58.975 54.545 0.00 0.00 0.00 2.90
5028 12419 2.653366 ACTCCTCCCCTGAACTAGTGTA 59.347 50.000 0.00 0.00 0.00 2.90
5029 12420 1.433592 ACTCCTCCCCTGAACTAGTGT 59.566 52.381 0.00 0.00 0.00 3.55
5030 12421 2.104170 GACTCCTCCCCTGAACTAGTG 58.896 57.143 0.00 0.00 0.00 2.74
5031 12422 2.004589 AGACTCCTCCCCTGAACTAGT 58.995 52.381 0.00 0.00 0.00 2.57
5032 12423 2.024846 TCAGACTCCTCCCCTGAACTAG 60.025 54.545 0.00 0.00 34.38 2.57
5033 12424 2.000803 TCAGACTCCTCCCCTGAACTA 58.999 52.381 0.00 0.00 34.38 2.24
5034 12425 0.787084 TCAGACTCCTCCCCTGAACT 59.213 55.000 0.00 0.00 34.38 3.01
5035 12426 1.484240 CATCAGACTCCTCCCCTGAAC 59.516 57.143 0.00 0.00 39.94 3.18
5036 12427 1.871418 CATCAGACTCCTCCCCTGAA 58.129 55.000 0.00 0.00 39.94 3.02
5037 12428 0.689080 GCATCAGACTCCTCCCCTGA 60.689 60.000 0.00 0.00 40.68 3.86
5038 12429 0.979709 TGCATCAGACTCCTCCCCTG 60.980 60.000 0.00 0.00 0.00 4.45
5039 12430 0.252881 TTGCATCAGACTCCTCCCCT 60.253 55.000 0.00 0.00 0.00 4.79
5040 12431 0.179936 CTTGCATCAGACTCCTCCCC 59.820 60.000 0.00 0.00 0.00 4.81
5041 12432 1.198713 TCTTGCATCAGACTCCTCCC 58.801 55.000 0.00 0.00 0.00 4.30
5042 12433 3.557228 AATCTTGCATCAGACTCCTCC 57.443 47.619 0.00 0.00 0.00 4.30
5043 12434 5.184711 AGAAAATCTTGCATCAGACTCCTC 58.815 41.667 0.00 0.00 0.00 3.71
5044 12435 5.176741 AGAAAATCTTGCATCAGACTCCT 57.823 39.130 0.00 0.00 0.00 3.69
5045 12436 5.413833 TGAAGAAAATCTTGCATCAGACTCC 59.586 40.000 0.00 0.00 36.73 3.85
5046 12437 6.492007 TGAAGAAAATCTTGCATCAGACTC 57.508 37.500 0.00 0.00 36.73 3.36
5047 12438 6.889301 TTGAAGAAAATCTTGCATCAGACT 57.111 33.333 0.00 0.00 36.73 3.24
5048 12439 8.530269 AATTTGAAGAAAATCTTGCATCAGAC 57.470 30.769 0.00 0.00 36.73 3.51
5049 12440 9.550406 AAAATTTGAAGAAAATCTTGCATCAGA 57.450 25.926 0.00 0.00 36.73 3.27
5052 12443 9.731519 CGTAAAATTTGAAGAAAATCTTGCATC 57.268 29.630 0.00 0.00 36.73 3.91
5053 12444 8.223100 GCGTAAAATTTGAAGAAAATCTTGCAT 58.777 29.630 0.00 0.00 36.73 3.96
5054 12445 7.563270 GCGTAAAATTTGAAGAAAATCTTGCA 58.437 30.769 0.00 0.00 36.73 4.08
5055 12446 6.727534 CGCGTAAAATTTGAAGAAAATCTTGC 59.272 34.615 0.00 0.00 36.73 4.01
5056 12447 7.991736 TCGCGTAAAATTTGAAGAAAATCTTG 58.008 30.769 5.77 0.00 36.73 3.02
5057 12448 8.742554 ATCGCGTAAAATTTGAAGAAAATCTT 57.257 26.923 5.77 0.00 39.87 2.40
5058 12449 8.020819 TGATCGCGTAAAATTTGAAGAAAATCT 58.979 29.630 5.77 0.00 37.51 2.40
5059 12450 8.157159 TGATCGCGTAAAATTTGAAGAAAATC 57.843 30.769 5.77 0.00 37.51 2.17
5060 12451 7.273381 CCTGATCGCGTAAAATTTGAAGAAAAT 59.727 33.333 5.77 0.00 40.32 1.82
5061 12452 6.580791 CCTGATCGCGTAAAATTTGAAGAAAA 59.419 34.615 5.77 0.00 0.00 2.29
5062 12453 6.083630 CCTGATCGCGTAAAATTTGAAGAAA 58.916 36.000 5.77 0.00 0.00 2.52
5063 12454 5.627172 CCTGATCGCGTAAAATTTGAAGAA 58.373 37.500 5.77 0.00 0.00 2.52
5064 12455 4.436852 GCCTGATCGCGTAAAATTTGAAGA 60.437 41.667 5.77 0.00 0.00 2.87
5065 12456 3.786048 GCCTGATCGCGTAAAATTTGAAG 59.214 43.478 5.77 0.00 0.00 3.02
5066 12457 3.426963 GGCCTGATCGCGTAAAATTTGAA 60.427 43.478 5.77 0.00 0.00 2.69
5067 12458 2.096819 GGCCTGATCGCGTAAAATTTGA 59.903 45.455 5.77 0.00 0.00 2.69
5068 12459 2.097466 AGGCCTGATCGCGTAAAATTTG 59.903 45.455 3.11 0.00 0.00 2.32
5069 12460 2.354821 GAGGCCTGATCGCGTAAAATTT 59.645 45.455 12.00 0.00 0.00 1.82
5070 12461 1.940613 GAGGCCTGATCGCGTAAAATT 59.059 47.619 12.00 0.00 0.00 1.82
5071 12462 1.134521 TGAGGCCTGATCGCGTAAAAT 60.135 47.619 12.00 0.00 0.00 1.82
5072 12463 0.248012 TGAGGCCTGATCGCGTAAAA 59.752 50.000 12.00 0.00 0.00 1.52
5073 12464 0.248012 TTGAGGCCTGATCGCGTAAA 59.752 50.000 12.00 0.00 0.00 2.01
5074 12465 0.248012 TTTGAGGCCTGATCGCGTAA 59.752 50.000 12.00 0.00 0.00 3.18
5075 12466 0.248012 TTTTGAGGCCTGATCGCGTA 59.752 50.000 12.00 0.00 0.00 4.42
5076 12467 1.003839 TTTTGAGGCCTGATCGCGT 60.004 52.632 12.00 0.00 0.00 6.01
5077 12468 1.717937 CTTTTGAGGCCTGATCGCG 59.282 57.895 12.00 0.00 0.00 5.87
5078 12469 1.028868 AGCTTTTGAGGCCTGATCGC 61.029 55.000 12.00 4.67 0.00 4.58
5079 12470 1.399791 GAAGCTTTTGAGGCCTGATCG 59.600 52.381 12.00 0.00 0.00 3.69
5080 12471 1.399791 CGAAGCTTTTGAGGCCTGATC 59.600 52.381 12.00 0.00 0.00 2.92
5081 12472 1.003580 TCGAAGCTTTTGAGGCCTGAT 59.996 47.619 12.00 0.00 0.00 2.90
5082 12473 0.396435 TCGAAGCTTTTGAGGCCTGA 59.604 50.000 12.00 0.00 0.00 3.86
5083 12474 1.068954 GTTCGAAGCTTTTGAGGCCTG 60.069 52.381 12.00 0.00 0.00 4.85
5084 12475 1.239347 GTTCGAAGCTTTTGAGGCCT 58.761 50.000 3.86 3.86 0.00 5.19
5085 12476 0.110192 CGTTCGAAGCTTTTGAGGCC 60.110 55.000 0.00 0.00 0.00 5.19
5086 12477 0.110192 CCGTTCGAAGCTTTTGAGGC 60.110 55.000 0.00 0.00 0.00 4.70
5087 12478 1.226746 ACCGTTCGAAGCTTTTGAGG 58.773 50.000 0.00 3.93 0.00 3.86
5088 12479 3.057734 ACTACCGTTCGAAGCTTTTGAG 58.942 45.455 0.00 0.00 0.00 3.02
5089 12480 3.102052 ACTACCGTTCGAAGCTTTTGA 57.898 42.857 0.00 0.00 0.00 2.69
5090 12481 3.872560 AACTACCGTTCGAAGCTTTTG 57.127 42.857 0.00 0.00 0.00 2.44
5091 12482 4.625028 ACTAACTACCGTTCGAAGCTTTT 58.375 39.130 0.00 0.00 34.59 2.27
5092 12483 4.248691 ACTAACTACCGTTCGAAGCTTT 57.751 40.909 0.00 0.00 34.59 3.51
5093 12484 3.930634 ACTAACTACCGTTCGAAGCTT 57.069 42.857 0.00 0.00 34.59 3.74
5094 12485 3.366781 GGAACTAACTACCGTTCGAAGCT 60.367 47.826 0.00 0.00 40.21 3.74
5095 12486 2.919859 GGAACTAACTACCGTTCGAAGC 59.080 50.000 0.00 0.00 40.21 3.86
5096 12487 3.057315 TGGGAACTAACTACCGTTCGAAG 60.057 47.826 0.00 0.00 40.21 3.79
5097 12488 2.890311 TGGGAACTAACTACCGTTCGAA 59.110 45.455 0.00 0.00 40.21 3.71
5098 12489 2.513753 TGGGAACTAACTACCGTTCGA 58.486 47.619 0.00 0.00 40.21 3.71
5099 12490 3.302365 TTGGGAACTAACTACCGTTCG 57.698 47.619 0.00 0.00 40.21 3.95
5100 12491 4.997905 GTTTGGGAACTAACTACCGTTC 57.002 45.455 0.00 0.00 41.88 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.