Multiple sequence alignment - TraesCS4D01G008800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G008800 chr4D 100.000 4524 0 0 1 4524 4287951 4283428 0.000000e+00 8355.0
1 TraesCS4D01G008800 chr4D 86.901 1710 138 27 12 1667 4245956 4247633 0.000000e+00 1838.0
2 TraesCS4D01G008800 chr4D 92.086 973 65 10 2610 3576 4248775 4249741 0.000000e+00 1360.0
3 TraesCS4D01G008800 chr4D 95.223 649 27 4 3879 4524 32406944 32406297 0.000000e+00 1024.0
4 TraesCS4D01G008800 chr4D 87.821 624 56 11 858 1475 4333066 4332457 0.000000e+00 713.0
5 TraesCS4D01G008800 chr4D 91.979 187 15 0 2369 2555 4248423 4248609 3.470000e-66 263.0
6 TraesCS4D01G008800 chr4D 84.579 214 26 3 1470 1676 4331977 4331764 5.930000e-49 206.0
7 TraesCS4D01G008800 chr4D 84.615 182 24 3 2369 2547 4273669 4273489 1.290000e-40 178.0
8 TraesCS4D01G008800 chr4A 86.056 1714 158 31 12 1676 599647235 599645554 0.000000e+00 1766.0
9 TraesCS4D01G008800 chr4A 88.677 1051 82 20 2610 3638 599644433 599643398 0.000000e+00 1247.0
10 TraesCS4D01G008800 chr4A 80.230 1042 176 20 2617 3645 599629924 599630948 0.000000e+00 756.0
11 TraesCS4D01G008800 chr4A 82.167 600 75 21 1721 2300 599645413 599644826 1.890000e-133 486.0
12 TraesCS4D01G008800 chr4A 78.692 474 90 9 12 478 600279914 600280383 5.690000e-79 305.0
13 TraesCS4D01G008800 chr4A 90.171 234 21 1 2332 2565 599644822 599644591 2.040000e-78 303.0
14 TraesCS4D01G008800 chr4B 85.489 1709 160 22 12 1676 4334144 4332480 0.000000e+00 1701.0
15 TraesCS4D01G008800 chr4B 90.462 996 86 8 2614 3604 4300710 4299719 0.000000e+00 1304.0
16 TraesCS4D01G008800 chr4B 88.421 1045 89 18 2610 3645 4331392 4330371 0.000000e+00 1230.0
17 TraesCS4D01G008800 chr4B 85.990 778 66 24 18 783 4303094 4302348 0.000000e+00 793.0
18 TraesCS4D01G008800 chr4B 89.526 506 52 1 1169 1673 4302320 4301815 1.370000e-179 640.0
19 TraesCS4D01G008800 chr4B 79.672 610 68 33 1721 2300 4332339 4331756 5.490000e-104 388.0
20 TraesCS4D01G008800 chr4B 90.295 237 17 2 2333 2565 4301103 4300869 5.690000e-79 305.0
21 TraesCS4D01G008800 chr4B 94.702 151 8 0 2398 2548 4331715 4331565 7.570000e-58 235.0
22 TraesCS4D01G008800 chr4B 77.104 297 55 7 2252 2547 7501163 7501447 4.680000e-35 159.0
23 TraesCS4D01G008800 chr4B 81.538 130 19 5 3657 3783 659371912 659372039 8.010000e-18 102.0
24 TraesCS4D01G008800 chr1D 96.130 646 22 3 3880 4524 290401159 290400516 0.000000e+00 1051.0
25 TraesCS4D01G008800 chr1D 80.556 144 25 3 3641 3782 202187761 202187903 1.720000e-19 108.0
26 TraesCS4D01G008800 chr3D 95.820 646 25 2 3881 4524 149485957 149485312 0.000000e+00 1042.0
27 TraesCS4D01G008800 chr3D 84.496 129 9 6 778 896 542132312 542132439 2.860000e-22 117.0
28 TraesCS4D01G008800 chr3D 83.721 129 11 6 786 906 542136545 542136671 3.700000e-21 113.0
29 TraesCS4D01G008800 chr3D 82.734 139 12 7 778 906 542143817 542143953 3.700000e-21 113.0
30 TraesCS4D01G008800 chr3D 82.014 139 13 6 778 906 542140176 542140312 1.720000e-19 108.0
31 TraesCS4D01G008800 chr2D 95.814 645 25 2 3879 4522 537199985 537199342 0.000000e+00 1040.0
32 TraesCS4D01G008800 chr2D 95.216 648 29 2 3879 4524 213297916 213297269 0.000000e+00 1024.0
33 TraesCS4D01G008800 chr6D 95.363 647 27 3 3879 4523 29677707 29677062 0.000000e+00 1026.0
34 TraesCS4D01G008800 chr6D 95.216 648 27 4 3879 4524 394495635 394496280 0.000000e+00 1022.0
35 TraesCS4D01G008800 chr6D 80.882 136 22 4 3650 3782 131931241 131931375 2.230000e-18 104.0
36 TraesCS4D01G008800 chr7D 95.216 648 29 2 3879 4524 22489515 22490162 0.000000e+00 1024.0
37 TraesCS4D01G008800 chr7D 79.861 144 26 3 3650 3790 579139547 579139404 8.010000e-18 102.0
38 TraesCS4D01G008800 chr5D 94.915 649 29 4 3879 4524 527080172 527079525 0.000000e+00 1013.0
39 TraesCS4D01G008800 chr5D 81.007 695 110 14 955 1647 439980413 439979739 2.400000e-147 532.0
40 TraesCS4D01G008800 chrUn 80.230 1042 176 20 2617 3645 47348338 47349362 0.000000e+00 756.0
41 TraesCS4D01G008800 chrUn 77.104 297 55 7 2252 2547 476939096 476939380 4.680000e-35 159.0
42 TraesCS4D01G008800 chrUn 83.234 167 24 3 2370 2533 47347931 47348096 2.820000e-32 150.0
43 TraesCS4D01G008800 chr5A 82.040 696 100 12 955 1647 555596448 555595775 1.830000e-158 569.0
44 TraesCS4D01G008800 chr5A 79.528 127 25 1 3657 3782 571463099 571462973 6.230000e-14 89.8
45 TraesCS4D01G008800 chr1B 77.273 286 59 4 2263 2547 46226787 46227067 3.620000e-36 163.0
46 TraesCS4D01G008800 chr1B 73.504 234 61 1 3644 3876 100642152 100641919 2.240000e-13 87.9
47 TraesCS4D01G008800 chr1B 88.312 77 4 5 3639 3712 672673075 672673149 2.240000e-13 87.9
48 TraesCS4D01G008800 chr3B 81.746 126 15 5 786 906 717692832 717692954 1.040000e-16 99.0
49 TraesCS4D01G008800 chr3B 77.941 136 26 4 3650 3782 578225481 578225615 1.040000e-11 82.4
50 TraesCS4D01G008800 chr3A 82.353 119 14 4 792 906 678035427 678035542 3.730000e-16 97.1
51 TraesCS4D01G008800 chr3A 79.137 139 28 1 3644 3781 449439134 449439272 1.340000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G008800 chr4D 4283428 4287951 4523 True 8355.000000 8355 100.00000 1 4524 1 chr4D.!!$R2 4523
1 TraesCS4D01G008800 chr4D 4245956 4249741 3785 False 1153.666667 1838 90.32200 12 3576 3 chr4D.!!$F1 3564
2 TraesCS4D01G008800 chr4D 32406297 32406944 647 True 1024.000000 1024 95.22300 3879 4524 1 chr4D.!!$R3 645
3 TraesCS4D01G008800 chr4D 4331764 4333066 1302 True 459.500000 713 86.20000 858 1676 2 chr4D.!!$R4 818
4 TraesCS4D01G008800 chr4A 599643398 599647235 3837 True 950.500000 1766 86.76775 12 3638 4 chr4A.!!$R1 3626
5 TraesCS4D01G008800 chr4A 599629924 599630948 1024 False 756.000000 756 80.23000 2617 3645 1 chr4A.!!$F1 1028
6 TraesCS4D01G008800 chr4B 4330371 4334144 3773 True 888.500000 1701 87.07100 12 3645 4 chr4B.!!$R2 3633
7 TraesCS4D01G008800 chr4B 4299719 4303094 3375 True 760.500000 1304 89.06825 18 3604 4 chr4B.!!$R1 3586
8 TraesCS4D01G008800 chr1D 290400516 290401159 643 True 1051.000000 1051 96.13000 3880 4524 1 chr1D.!!$R1 644
9 TraesCS4D01G008800 chr3D 149485312 149485957 645 True 1042.000000 1042 95.82000 3881 4524 1 chr3D.!!$R1 643
10 TraesCS4D01G008800 chr2D 537199342 537199985 643 True 1040.000000 1040 95.81400 3879 4522 1 chr2D.!!$R2 643
11 TraesCS4D01G008800 chr2D 213297269 213297916 647 True 1024.000000 1024 95.21600 3879 4524 1 chr2D.!!$R1 645
12 TraesCS4D01G008800 chr6D 29677062 29677707 645 True 1026.000000 1026 95.36300 3879 4523 1 chr6D.!!$R1 644
13 TraesCS4D01G008800 chr6D 394495635 394496280 645 False 1022.000000 1022 95.21600 3879 4524 1 chr6D.!!$F2 645
14 TraesCS4D01G008800 chr7D 22489515 22490162 647 False 1024.000000 1024 95.21600 3879 4524 1 chr7D.!!$F1 645
15 TraesCS4D01G008800 chr5D 527079525 527080172 647 True 1013.000000 1013 94.91500 3879 4524 1 chr5D.!!$R2 645
16 TraesCS4D01G008800 chr5D 439979739 439980413 674 True 532.000000 532 81.00700 955 1647 1 chr5D.!!$R1 692
17 TraesCS4D01G008800 chrUn 47347931 47349362 1431 False 453.000000 756 81.73200 2370 3645 2 chrUn.!!$F2 1275
18 TraesCS4D01G008800 chr5A 555595775 555596448 673 True 569.000000 569 82.04000 955 1647 1 chr5A.!!$R1 692

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
841 888 0.035820 AAAGCTCGCCCGTTAATGGA 60.036 50.0 15.71 0.0 0.00 3.41 F
1478 2037 0.254178 CTCAAGGGGTGCAGCTACAT 59.746 55.0 16.65 0.0 0.00 2.29 F
1815 2483 0.725117 GTCGTTATTCCTGCCAACGG 59.275 55.0 6.28 0.0 43.84 4.44 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1825 2493 0.183492 AAAGTGTTCCCTGCAGAGCA 59.817 50.000 17.39 1.16 36.92 4.26 R
3405 4299 1.271102 GACTTGCGAGACTGGAGTTCT 59.729 52.381 8.31 0.00 0.00 3.01 R
3803 4724 0.036022 GCCACCTCCCTATGCTCATC 59.964 60.000 0.00 0.00 0.00 2.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 64 1.817357 CAGCACTTCAATGAGCTCCA 58.183 50.000 12.15 0.00 34.61 3.86
66 67 1.471684 GCACTTCAATGAGCTCCAAGG 59.528 52.381 12.15 0.00 0.00 3.61
95 96 1.807573 GGCGACGAAGAAGCTCCAG 60.808 63.158 0.00 0.00 34.51 3.86
204 213 2.361357 ACGAGCTCGCCTACACCT 60.361 61.111 34.83 11.05 44.43 4.00
210 219 0.248539 GCTCGCCTACACCTTCTACG 60.249 60.000 0.00 0.00 0.00 3.51
245 254 5.152623 AGTTCCTTCTCGACATGAATTCA 57.847 39.130 11.26 11.26 0.00 2.57
343 352 4.461081 GGTCTGGACTATCTATGTAGCAGG 59.539 50.000 0.67 0.00 0.00 4.85
344 353 5.317808 GTCTGGACTATCTATGTAGCAGGA 58.682 45.833 0.00 0.00 0.00 3.86
346 355 5.770663 TCTGGACTATCTATGTAGCAGGAAC 59.229 44.000 0.00 0.00 0.00 3.62
348 357 6.077993 TGGACTATCTATGTAGCAGGAACAT 58.922 40.000 0.00 0.00 40.57 2.71
349 358 6.015095 TGGACTATCTATGTAGCAGGAACATG 60.015 42.308 0.00 0.00 38.05 3.21
359 378 7.341445 TGTAGCAGGAACATGTTTAAGTTTT 57.659 32.000 13.36 0.00 0.00 2.43
399 418 8.191534 AGGTACTATTTGCGGTATCTATTCTT 57.808 34.615 0.00 0.00 36.02 2.52
400 419 8.088981 AGGTACTATTTGCGGTATCTATTCTTG 58.911 37.037 0.00 0.00 36.02 3.02
418 437 4.115199 GCCGGGGATGAACTGCCT 62.115 66.667 2.18 0.00 35.23 4.75
427 446 3.256558 GGATGAACTGCCTGCAAAATTC 58.743 45.455 0.00 0.00 0.00 2.17
466 485 7.419321 GTAAAACGATTTTGCGGATAGAAAG 57.581 36.000 0.00 0.00 34.19 2.62
467 486 5.622770 AAACGATTTTGCGGATAGAAAGT 57.377 34.783 0.00 0.00 35.12 2.66
477 496 7.681939 TTGCGGATAGAAAGTTTTAACAGAT 57.318 32.000 0.00 0.00 0.00 2.90
485 504 6.801575 AGAAAGTTTTAACAGATTTTGCGGA 58.198 32.000 0.00 0.00 0.00 5.54
508 527 3.359950 TCTGTTCTGCTAGAGATGCTCA 58.640 45.455 0.00 0.00 32.06 4.26
529 548 6.410942 TCATATAGTGCAGTATTGTGAGCT 57.589 37.500 18.93 0.00 0.00 4.09
558 577 2.515901 GTCACCCACAGCCCAAGT 59.484 61.111 0.00 0.00 0.00 3.16
559 578 1.758592 GTCACCCACAGCCCAAGTA 59.241 57.895 0.00 0.00 0.00 2.24
560 579 0.605589 GTCACCCACAGCCCAAGTAC 60.606 60.000 0.00 0.00 0.00 2.73
561 580 1.303317 CACCCACAGCCCAAGTACC 60.303 63.158 0.00 0.00 0.00 3.34
562 581 2.046314 CCCACAGCCCAAGTACCG 60.046 66.667 0.00 0.00 0.00 4.02
563 582 2.046314 CCACAGCCCAAGTACCGG 60.046 66.667 0.00 0.00 0.00 5.28
564 583 2.746277 CACAGCCCAAGTACCGGC 60.746 66.667 0.00 7.92 46.09 6.13
568 587 4.796495 GCCCAAGTACCGGCCTGG 62.796 72.222 0.00 11.48 46.41 4.45
665 684 1.679153 GAAAAGGAAAACCACGCAGGA 59.321 47.619 0.93 0.00 41.22 3.86
668 687 1.600916 GGAAAACCACGCAGGAGCT 60.601 57.895 0.93 0.00 41.22 4.09
670 689 1.079503 GAAAACCACGCAGGAGCTAG 58.920 55.000 0.93 0.00 41.22 3.42
676 695 4.880537 CGCAGGAGCTAGGCACGG 62.881 72.222 4.83 0.00 39.10 4.94
683 702 3.431725 GCTAGGCACGGCAACCAC 61.432 66.667 0.00 0.00 32.95 4.16
706 725 5.239744 ACACAGTTCACACACACAAAAGTAA 59.760 36.000 0.00 0.00 0.00 2.24
732 751 3.268330 AGAGTATAGCAGACGAACGACA 58.732 45.455 0.14 0.00 0.00 4.35
748 767 3.403038 ACGACAGAACCATCCAAAGAAG 58.597 45.455 0.00 0.00 0.00 2.85
750 769 4.256920 CGACAGAACCATCCAAAGAAGAT 58.743 43.478 0.00 0.00 0.00 2.40
770 789 0.755686 GCCCTACACTCCATCTCCAG 59.244 60.000 0.00 0.00 0.00 3.86
778 797 3.052566 ACACTCCATCTCCAGACCATCTA 60.053 47.826 0.00 0.00 0.00 1.98
804 847 1.068832 CATTCATGCACTGCACGCAC 61.069 55.000 5.67 0.00 43.04 5.34
841 888 0.035820 AAAGCTCGCCCGTTAATGGA 60.036 50.000 15.71 0.00 0.00 3.41
852 899 3.945285 CCCGTTAATGGACAAGCAAGTAT 59.055 43.478 15.71 0.00 0.00 2.12
886 933 3.660111 GCCGCCAAACGCTTCAGT 61.660 61.111 0.00 0.00 41.76 3.41
906 953 2.333417 GGAGAGTCTCGTGCGTCCA 61.333 63.158 13.97 0.00 0.00 4.02
953 1014 0.681887 TACTCCGCCACATCTTCCGA 60.682 55.000 0.00 0.00 0.00 4.55
964 1025 1.137675 CATCTTCCGATCAGCAGGTGA 59.862 52.381 4.40 4.40 40.38 4.02
986 1049 3.564218 GCCCCAGATCCGCTCCAT 61.564 66.667 0.00 0.00 0.00 3.41
1079 1142 2.987547 GAGTCCACCCCGTCGTCA 60.988 66.667 0.00 0.00 0.00 4.35
1080 1143 2.283676 AGTCCACCCCGTCGTCAT 60.284 61.111 0.00 0.00 0.00 3.06
1081 1144 2.183555 GTCCACCCCGTCGTCATC 59.816 66.667 0.00 0.00 0.00 2.92
1082 1145 3.072468 TCCACCCCGTCGTCATCC 61.072 66.667 0.00 0.00 0.00 3.51
1083 1146 4.157120 CCACCCCGTCGTCATCCC 62.157 72.222 0.00 0.00 0.00 3.85
1084 1147 3.387091 CACCCCGTCGTCATCCCA 61.387 66.667 0.00 0.00 0.00 4.37
1132 1201 4.767255 CCGGTGGCTGGCTGACTC 62.767 72.222 2.00 0.00 0.00 3.36
1133 1202 3.699894 CGGTGGCTGGCTGACTCT 61.700 66.667 2.00 0.00 0.00 3.24
1134 1203 2.267324 GGTGGCTGGCTGACTCTC 59.733 66.667 2.00 0.00 0.00 3.20
1135 1204 2.267324 GTGGCTGGCTGACTCTCC 59.733 66.667 2.00 0.00 0.00 3.71
1136 1205 2.121385 TGGCTGGCTGACTCTCCT 59.879 61.111 2.00 0.00 0.00 3.69
1141 1210 1.136110 GCTGGCTGACTCTCCTAGTTC 59.864 57.143 0.00 0.00 39.07 3.01
1147 1216 4.202111 GGCTGACTCTCCTAGTTCATCTTC 60.202 50.000 0.00 0.00 39.07 2.87
1155 1224 2.099263 CCTAGTTCATCTTCGCCTTCGA 59.901 50.000 0.00 0.00 43.89 3.71
1156 1225 2.969628 AGTTCATCTTCGCCTTCGAT 57.030 45.000 0.00 0.00 45.04 3.59
1157 1226 2.815478 AGTTCATCTTCGCCTTCGATC 58.185 47.619 0.00 0.00 45.04 3.69
1158 1227 2.428890 AGTTCATCTTCGCCTTCGATCT 59.571 45.455 0.00 0.00 45.04 2.75
1159 1228 3.118956 AGTTCATCTTCGCCTTCGATCTT 60.119 43.478 0.00 0.00 45.04 2.40
1219 1289 2.032634 GCAACTGCGGTCGATGGAA 61.033 57.895 0.00 0.00 0.00 3.53
1231 1301 1.833630 TCGATGGAAGAGAATGGCACT 59.166 47.619 0.00 0.00 0.00 4.40
1309 1379 2.126071 CTCAACGACATCGCCGGT 60.126 61.111 1.90 0.00 44.43 5.28
1358 1428 5.126869 TCTCTTCCTCTGCTTCTGTTATCTG 59.873 44.000 0.00 0.00 0.00 2.90
1382 1456 1.202842 TCGCTCGGGTACTCATCCATA 60.203 52.381 0.00 0.00 0.00 2.74
1437 1511 1.275291 CCTGTGGTGGACTACGACATT 59.725 52.381 7.23 0.00 45.20 2.71
1478 2037 0.254178 CTCAAGGGGTGCAGCTACAT 59.746 55.000 16.65 0.00 0.00 2.29
1488 2047 4.692625 GGGTGCAGCTACATGTATAATGAG 59.307 45.833 16.65 0.00 0.00 2.90
1516 2075 2.305927 CCCTTTCTTTCCCTGCTCAGTA 59.694 50.000 0.00 0.00 0.00 2.74
1565 2129 5.363939 TGTTGCATCCATATCGTGTGATTA 58.636 37.500 0.00 0.00 35.99 1.75
1623 2192 1.931172 GCGTTGTCGTGTAGCCATAAT 59.069 47.619 0.00 0.00 39.49 1.28
1626 2195 4.210537 GCGTTGTCGTGTAGCCATAATTAT 59.789 41.667 0.00 0.00 39.49 1.28
1628 2197 6.399669 GCGTTGTCGTGTAGCCATAATTATAG 60.400 42.308 0.00 0.00 39.49 1.31
1649 2218 1.086696 TGCCGAATTTAGCTGTGCTC 58.913 50.000 0.00 0.00 40.44 4.26
1651 2220 1.737838 CCGAATTTAGCTGTGCTCCA 58.262 50.000 0.00 0.00 40.44 3.86
1653 2222 3.466836 CCGAATTTAGCTGTGCTCCATA 58.533 45.455 0.00 0.00 40.44 2.74
1699 2342 4.886247 TTTGCTATTATGCGTAACACCC 57.114 40.909 0.00 0.00 35.36 4.61
1719 2362 5.536916 CACCCATGGTAGTTTTTCTGGTTTA 59.463 40.000 11.73 0.00 32.11 2.01
1724 2389 5.005094 TGGTAGTTTTTCTGGTTTATCGGG 58.995 41.667 0.00 0.00 0.00 5.14
1732 2397 0.772384 TGGTTTATCGGGGTGGTGTT 59.228 50.000 0.00 0.00 0.00 3.32
1739 2404 2.418910 CGGGGTGGTGTTGTTTGCA 61.419 57.895 0.00 0.00 0.00 4.08
1741 2406 1.227234 GGGTGGTGTTGTTTGCAGC 60.227 57.895 0.00 0.00 35.19 5.25
1759 2424 2.854777 CAGCTGTCGTATACACTCAAGC 59.145 50.000 5.25 4.57 33.45 4.01
1764 2429 5.174035 GCTGTCGTATACACTCAAGCATAAG 59.826 44.000 3.32 0.00 33.45 1.73
1773 2438 3.864583 CACTCAAGCATAAGAGCTGAGTC 59.135 47.826 13.91 0.00 45.89 3.36
1790 2458 3.067040 TGAGTCTAGTTGTGTTACACGCA 59.933 43.478 11.07 0.00 37.14 5.24
1791 2459 3.378339 AGTCTAGTTGTGTTACACGCAC 58.622 45.455 11.07 9.88 38.47 5.34
1812 2480 3.823873 ACAATTGTCGTTATTCCTGCCAA 59.176 39.130 4.92 0.00 0.00 4.52
1813 2481 4.165779 CAATTGTCGTTATTCCTGCCAAC 58.834 43.478 0.00 0.00 0.00 3.77
1815 2483 0.725117 GTCGTTATTCCTGCCAACGG 59.275 55.000 6.28 0.00 43.84 4.44
1834 2502 1.269102 GGCAATGCTATTGCTCTGCAG 60.269 52.381 23.69 7.63 43.93 4.41
1863 2531 1.588674 TGTCGTCTTGCGGACATTTT 58.411 45.000 9.68 0.00 44.70 1.82
1864 2532 1.944024 TGTCGTCTTGCGGACATTTTT 59.056 42.857 9.68 0.00 44.70 1.94
1865 2533 2.286713 TGTCGTCTTGCGGACATTTTTG 60.287 45.455 9.68 0.00 44.70 2.44
1866 2534 1.052287 CGTCTTGCGGACATTTTTGC 58.948 50.000 9.68 0.00 44.70 3.68
1867 2535 1.334960 CGTCTTGCGGACATTTTTGCT 60.335 47.619 9.68 0.00 44.70 3.91
1868 2536 2.095969 CGTCTTGCGGACATTTTTGCTA 60.096 45.455 9.68 0.00 44.70 3.49
1874 2542 5.728351 TGCGGACATTTTTGCTATAGTAC 57.272 39.130 0.84 0.00 0.00 2.73
1878 2546 7.010738 TGCGGACATTTTTGCTATAGTACTAAC 59.989 37.037 6.70 0.49 0.00 2.34
1928 2601 7.881775 ATTCTAGGACGGCAATAAAAATTCT 57.118 32.000 0.00 0.00 0.00 2.40
1941 2615 7.254727 GCAATAAAAATTCTGGTTCTGCAAACA 60.255 33.333 11.93 0.00 0.00 2.83
1948 2622 3.318839 TCTGGTTCTGCAAACATTTCTGG 59.681 43.478 11.93 0.00 0.00 3.86
1949 2623 3.030291 TGGTTCTGCAAACATTTCTGGT 58.970 40.909 11.93 0.00 0.00 4.00
1950 2624 4.211125 TGGTTCTGCAAACATTTCTGGTA 58.789 39.130 11.93 0.00 0.00 3.25
1951 2625 4.832266 TGGTTCTGCAAACATTTCTGGTAT 59.168 37.500 11.93 0.00 0.00 2.73
1952 2626 5.048083 TGGTTCTGCAAACATTTCTGGTATC 60.048 40.000 11.93 0.00 0.00 2.24
1953 2627 5.402398 GTTCTGCAAACATTTCTGGTATCC 58.598 41.667 6.82 0.00 0.00 2.59
2000 2674 3.992643 TCAATGGTCATTTTGCTGGTTG 58.007 40.909 0.00 0.00 0.00 3.77
2001 2675 3.387374 TCAATGGTCATTTTGCTGGTTGT 59.613 39.130 0.00 0.00 0.00 3.32
2002 2676 3.665745 ATGGTCATTTTGCTGGTTGTC 57.334 42.857 0.00 0.00 0.00 3.18
2007 2705 3.568007 GTCATTTTGCTGGTTGTCCACTA 59.432 43.478 0.00 0.00 39.03 2.74
2047 2745 2.973419 CAATGTGTTGGCAATTTGGC 57.027 45.000 15.53 15.53 44.03 4.52
2119 2817 8.812329 GTCATATAGCAATAATTAGAAGAGCCG 58.188 37.037 0.00 0.00 0.00 5.52
2120 2818 7.981789 TCATATAGCAATAATTAGAAGAGCCGG 59.018 37.037 0.00 0.00 0.00 6.13
2126 2824 7.389053 AGCAATAATTAGAAGAGCCGGATTTAG 59.611 37.037 5.05 0.00 0.00 1.85
2133 2831 2.699954 AGAGCCGGATTTAGTTGTGTG 58.300 47.619 5.05 0.00 0.00 3.82
2138 2836 2.095768 CCGGATTTAGTTGTGTGCTGTG 60.096 50.000 0.00 0.00 0.00 3.66
2144 2842 6.293955 GGATTTAGTTGTGTGCTGTGTAATGT 60.294 38.462 0.00 0.00 0.00 2.71
2205 2903 5.565695 GTGAAACTTTGACGTGTTGTACAT 58.434 37.500 0.00 0.00 0.00 2.29
2303 3001 3.901222 TGTGTCTGACAACCTTGATAGGA 59.099 43.478 12.81 0.00 45.05 2.94
2304 3002 4.346709 TGTGTCTGACAACCTTGATAGGAA 59.653 41.667 12.81 0.00 45.05 3.36
2305 3003 5.163248 TGTGTCTGACAACCTTGATAGGAAA 60.163 40.000 12.81 0.00 45.05 3.13
2306 3004 5.940470 GTGTCTGACAACCTTGATAGGAAAT 59.060 40.000 12.81 0.00 45.05 2.17
2307 3005 5.939883 TGTCTGACAACCTTGATAGGAAATG 59.060 40.000 8.27 0.00 45.05 2.32
2308 3006 5.355350 GTCTGACAACCTTGATAGGAAATGG 59.645 44.000 2.24 0.00 45.05 3.16
2309 3007 4.016444 TGACAACCTTGATAGGAAATGGC 58.984 43.478 0.00 0.00 45.05 4.40
2310 3008 4.263905 TGACAACCTTGATAGGAAATGGCT 60.264 41.667 0.00 0.00 45.05 4.75
2311 3009 4.273318 ACAACCTTGATAGGAAATGGCTC 58.727 43.478 0.00 0.00 45.05 4.70
2312 3010 3.584733 ACCTTGATAGGAAATGGCTCC 57.415 47.619 0.00 0.00 45.05 4.70
2314 3012 3.529319 ACCTTGATAGGAAATGGCTCCTT 59.471 43.478 0.00 0.00 43.76 3.36
2315 3013 4.140536 CCTTGATAGGAAATGGCTCCTTC 58.859 47.826 0.00 0.00 43.76 3.46
2316 3014 4.385643 CCTTGATAGGAAATGGCTCCTTCA 60.386 45.833 0.00 1.69 43.76 3.02
2317 3015 4.156455 TGATAGGAAATGGCTCCTTCAC 57.844 45.455 0.00 0.00 43.76 3.18
2318 3016 3.523157 TGATAGGAAATGGCTCCTTCACA 59.477 43.478 0.00 0.00 43.76 3.58
2319 3017 2.978156 AGGAAATGGCTCCTTCACAA 57.022 45.000 0.00 0.00 43.76 3.33
2320 3018 3.463048 AGGAAATGGCTCCTTCACAAT 57.537 42.857 0.00 0.00 43.76 2.71
2321 3019 4.591321 AGGAAATGGCTCCTTCACAATA 57.409 40.909 0.00 0.00 43.76 1.90
2322 3020 5.134725 AGGAAATGGCTCCTTCACAATAT 57.865 39.130 0.00 0.00 43.76 1.28
2323 3021 5.522641 AGGAAATGGCTCCTTCACAATATT 58.477 37.500 0.00 0.00 43.76 1.28
2324 3022 6.672593 AGGAAATGGCTCCTTCACAATATTA 58.327 36.000 0.00 0.00 43.76 0.98
2325 3023 7.300658 AGGAAATGGCTCCTTCACAATATTAT 58.699 34.615 0.00 0.00 43.76 1.28
2326 3024 7.786464 AGGAAATGGCTCCTTCACAATATTATT 59.214 33.333 0.00 0.00 43.76 1.40
2327 3025 9.077885 GGAAATGGCTCCTTCACAATATTATTA 57.922 33.333 0.00 0.00 32.21 0.98
2330 3028 9.812347 AATGGCTCCTTCACAATATTATTATGA 57.188 29.630 0.00 0.00 0.00 2.15
2357 3055 6.447162 TCGCTAGTATGGTTATGTTGATCAG 58.553 40.000 0.00 0.00 0.00 2.90
2362 3060 4.579454 ATGGTTATGTTGATCAGCATGC 57.421 40.909 29.05 21.59 34.14 4.06
2383 3093 4.396478 TGCCACAATAGCGTTTAATAAGCA 59.604 37.500 0.00 0.00 0.00 3.91
2394 3104 7.547227 AGCGTTTAATAAGCATGAAAAATCCT 58.453 30.769 0.00 0.00 0.00 3.24
2410 3120 8.602424 TGAAAAATCCTTAGTGTCCTGATCTTA 58.398 33.333 0.00 0.00 0.00 2.10
2418 3128 5.913137 AGTGTCCTGATCTTACTCTTCTG 57.087 43.478 0.00 0.00 0.00 3.02
2480 3190 1.086696 CATGCAATTCCGTCGGTTCT 58.913 50.000 11.88 0.00 0.00 3.01
2482 3192 1.717194 TGCAATTCCGTCGGTTCTAC 58.283 50.000 11.88 0.36 0.00 2.59
2556 3311 5.478332 TGCACAATCATTATTACCAACACCA 59.522 36.000 0.00 0.00 0.00 4.17
2576 3386 7.560368 ACACCATCTATATTTAGCTCATAGCC 58.440 38.462 0.00 0.00 43.77 3.93
2588 3410 2.042464 CTCATAGCCCTAACCTGCTCA 58.958 52.381 0.00 0.00 39.00 4.26
2609 3431 4.341806 TCATTCACTTCATTTGCAACCACT 59.658 37.500 0.00 0.00 0.00 4.00
2610 3432 3.713858 TCACTTCATTTGCAACCACTG 57.286 42.857 0.00 0.00 0.00 3.66
2611 3433 3.023119 TCACTTCATTTGCAACCACTGT 58.977 40.909 0.00 0.00 0.00 3.55
2753 3640 4.943705 AGAATTTGACTGCGTGGTATGATT 59.056 37.500 0.00 0.00 0.00 2.57
2766 3653 5.469760 CGTGGTATGATTGCATTATTCCAGA 59.530 40.000 0.00 0.00 35.94 3.86
2808 3695 3.819368 TGCTTGGAATGAGTTCTGTGAA 58.181 40.909 0.00 0.00 34.68 3.18
2851 3738 2.984672 TGATGCAGGTAGCCCCTTATA 58.015 47.619 0.00 0.00 42.73 0.98
2914 3802 7.303182 TCATAATCTAAAGATCGGACATGGT 57.697 36.000 0.00 0.00 32.75 3.55
3008 3896 6.205270 TGTTTGGTTTCCGAGGTATCTAAAAC 59.795 38.462 0.00 0.00 31.67 2.43
3013 3901 6.589907 GGTTTCCGAGGTATCTAAAACGTTTA 59.410 38.462 15.03 0.00 32.50 2.01
3047 3935 3.549471 GTGTCATCACGATTCAGTAGCTG 59.451 47.826 0.00 0.00 34.79 4.24
3109 3997 5.706369 TCACCGTAAATTAAGCTTAGCCAAA 59.294 36.000 6.24 0.00 0.00 3.28
3174 4062 1.963515 GAAACCTTGTGACTTGGCCAT 59.036 47.619 6.09 0.00 0.00 4.40
3182 4070 3.966979 TGTGACTTGGCCATCAATATGT 58.033 40.909 6.09 0.00 34.45 2.29
3191 4084 6.508030 TGGCCATCAATATGTACCTTAGAA 57.492 37.500 0.00 0.00 31.63 2.10
3261 4154 0.750850 TCGCAGCCTATGGTCCTAAC 59.249 55.000 0.00 0.00 0.00 2.34
3287 4180 3.274288 AGCTATGGAAGGAAAAAGAGCG 58.726 45.455 0.00 0.00 33.91 5.03
3313 4206 1.202855 CCATGTGATCCCTCCCATGAC 60.203 57.143 0.00 0.00 37.47 3.06
3340 4234 6.665680 GGGTGTATGTATCTCTCCAGATGTAT 59.334 42.308 0.00 0.00 39.90 2.29
3371 4265 2.024176 TAGGTGTCTGGCTTTGGAGA 57.976 50.000 0.00 0.00 0.00 3.71
3405 4299 7.335673 TGAAATAACATGAGGAATCTTGCGTAA 59.664 33.333 0.00 0.00 0.00 3.18
3431 4344 2.102420 TCCAGTCTCGCAAGTCTTCAAA 59.898 45.455 0.00 0.00 39.48 2.69
3475 4388 6.096987 TCAATGTCTCTGTCAACTCTATACCC 59.903 42.308 0.00 0.00 0.00 3.69
3558 4478 3.172229 ACCGGTGAATTGGTTTTGTTG 57.828 42.857 6.12 0.00 33.81 3.33
3567 4487 7.397970 GTGAATTGGTTTTGTTGTATGTTGTG 58.602 34.615 0.00 0.00 0.00 3.33
3576 4496 0.249120 TGTATGTTGTGGGCTCTCCG 59.751 55.000 0.00 0.00 38.76 4.63
3641 4562 2.319844 CTTGAGCAAGGGGAAAGGTTT 58.680 47.619 2.30 0.00 34.87 3.27
3645 4566 2.434336 GAGCAAGGGGAAAGGTTTTTGT 59.566 45.455 0.00 0.00 0.00 2.83
3646 4567 2.434336 AGCAAGGGGAAAGGTTTTTGTC 59.566 45.455 0.00 0.00 0.00 3.18
3647 4568 2.169561 GCAAGGGGAAAGGTTTTTGTCA 59.830 45.455 0.00 0.00 0.00 3.58
3648 4569 3.181455 GCAAGGGGAAAGGTTTTTGTCAT 60.181 43.478 0.00 0.00 0.00 3.06
3649 4570 4.685848 GCAAGGGGAAAGGTTTTTGTCATT 60.686 41.667 0.00 0.00 0.00 2.57
3650 4571 5.436175 CAAGGGGAAAGGTTTTTGTCATTT 58.564 37.500 0.00 0.00 0.00 2.32
3651 4572 5.290493 AGGGGAAAGGTTTTTGTCATTTC 57.710 39.130 0.00 0.00 35.68 2.17
3654 4575 4.385825 GGAAAGGTTTTTGTCATTTCCCC 58.614 43.478 9.86 0.00 44.64 4.81
3655 4576 4.141597 GGAAAGGTTTTTGTCATTTCCCCA 60.142 41.667 9.86 0.00 44.64 4.96
3656 4577 5.456042 GGAAAGGTTTTTGTCATTTCCCCAT 60.456 40.000 9.86 0.00 44.64 4.00
3657 4578 5.645056 AAGGTTTTTGTCATTTCCCCATT 57.355 34.783 0.00 0.00 0.00 3.16
3658 4579 4.971939 AGGTTTTTGTCATTTCCCCATTG 58.028 39.130 0.00 0.00 0.00 2.82
3659 4580 4.071423 GGTTTTTGTCATTTCCCCATTGG 58.929 43.478 0.00 0.00 0.00 3.16
3671 4592 3.545003 CCATTGGGGGCATCATTCT 57.455 52.632 0.00 0.00 0.00 2.40
3672 4593 1.797320 CCATTGGGGGCATCATTCTT 58.203 50.000 0.00 0.00 0.00 2.52
3673 4594 1.414919 CCATTGGGGGCATCATTCTTG 59.585 52.381 0.00 0.00 0.00 3.02
3674 4595 1.414919 CATTGGGGGCATCATTCTTGG 59.585 52.381 0.00 0.00 0.00 3.61
3675 4596 0.709397 TTGGGGGCATCATTCTTGGA 59.291 50.000 0.00 0.00 0.00 3.53
3676 4597 0.259647 TGGGGGCATCATTCTTGGAG 59.740 55.000 0.00 0.00 0.00 3.86
3677 4598 0.468771 GGGGGCATCATTCTTGGAGG 60.469 60.000 0.00 0.00 0.00 4.30
3678 4599 0.259938 GGGGCATCATTCTTGGAGGT 59.740 55.000 0.00 0.00 0.00 3.85
3679 4600 1.396653 GGGCATCATTCTTGGAGGTG 58.603 55.000 0.00 0.00 0.00 4.00
3680 4601 1.341383 GGGCATCATTCTTGGAGGTGT 60.341 52.381 0.00 0.00 0.00 4.16
3681 4602 1.747355 GGCATCATTCTTGGAGGTGTG 59.253 52.381 0.00 0.00 0.00 3.82
3682 4603 1.133790 GCATCATTCTTGGAGGTGTGC 59.866 52.381 0.00 0.00 0.00 4.57
3683 4604 2.439409 CATCATTCTTGGAGGTGTGCA 58.561 47.619 0.00 0.00 0.00 4.57
3684 4605 2.885135 TCATTCTTGGAGGTGTGCAT 57.115 45.000 0.00 0.00 0.00 3.96
3685 4606 2.715046 TCATTCTTGGAGGTGTGCATC 58.285 47.619 0.00 0.00 0.00 3.91
3686 4607 1.399440 CATTCTTGGAGGTGTGCATCG 59.601 52.381 0.00 0.00 0.00 3.84
3687 4608 0.684535 TTCTTGGAGGTGTGCATCGA 59.315 50.000 0.00 0.00 0.00 3.59
3688 4609 0.037326 TCTTGGAGGTGTGCATCGAC 60.037 55.000 0.00 0.00 0.00 4.20
3689 4610 0.036952 CTTGGAGGTGTGCATCGACT 60.037 55.000 0.00 0.00 0.00 4.18
3690 4611 0.037326 TTGGAGGTGTGCATCGACTC 60.037 55.000 0.00 0.00 0.00 3.36
3691 4612 1.517257 GGAGGTGTGCATCGACTCG 60.517 63.158 0.00 0.00 0.00 4.18
3692 4613 1.506718 GAGGTGTGCATCGACTCGA 59.493 57.895 3.06 3.06 41.13 4.04
3693 4614 0.524392 GAGGTGTGCATCGACTCGAG 60.524 60.000 11.84 11.84 39.91 4.04
3694 4615 1.517257 GGTGTGCATCGACTCGAGG 60.517 63.158 18.41 8.73 39.91 4.63
3695 4616 1.517257 GTGTGCATCGACTCGAGGG 60.517 63.158 18.41 8.44 39.91 4.30
3696 4617 1.677633 TGTGCATCGACTCGAGGGA 60.678 57.895 18.41 13.91 39.91 4.20
3697 4618 3.197614 TGCATCGACTCGAGGGAC 58.802 61.111 18.41 6.91 39.91 4.46
3698 4619 2.413765 GCATCGACTCGAGGGACC 59.586 66.667 18.41 5.14 39.91 4.46
3699 4620 2.415608 GCATCGACTCGAGGGACCA 61.416 63.158 18.41 0.00 39.91 4.02
3700 4621 1.730487 CATCGACTCGAGGGACCAG 59.270 63.158 18.41 4.20 39.91 4.00
3701 4622 1.032657 CATCGACTCGAGGGACCAGT 61.033 60.000 18.41 0.00 39.91 4.00
3702 4623 1.032657 ATCGACTCGAGGGACCAGTG 61.033 60.000 18.41 0.00 39.91 3.66
3703 4624 2.701780 CGACTCGAGGGACCAGTGG 61.702 68.421 18.41 7.91 0.00 4.00
3704 4625 1.304217 GACTCGAGGGACCAGTGGA 60.304 63.158 18.40 0.00 0.00 4.02
3705 4626 0.898789 GACTCGAGGGACCAGTGGAA 60.899 60.000 18.40 0.00 0.00 3.53
3706 4627 1.186267 ACTCGAGGGACCAGTGGAAC 61.186 60.000 18.40 9.35 0.00 3.62
3707 4628 1.152419 TCGAGGGACCAGTGGAACA 60.152 57.895 18.40 0.00 41.43 3.18
3708 4629 0.544357 TCGAGGGACCAGTGGAACAT 60.544 55.000 18.40 5.34 44.52 2.71
3709 4630 0.324943 CGAGGGACCAGTGGAACATT 59.675 55.000 18.40 0.00 44.52 2.71
3710 4631 1.271379 CGAGGGACCAGTGGAACATTT 60.271 52.381 18.40 0.00 44.52 2.32
3711 4632 2.437413 GAGGGACCAGTGGAACATTTC 58.563 52.381 18.40 0.75 44.52 2.17
3712 4633 2.040412 GAGGGACCAGTGGAACATTTCT 59.960 50.000 18.40 3.04 44.52 2.52
3713 4634 2.162681 GGGACCAGTGGAACATTTCTG 58.837 52.381 18.40 0.00 44.52 3.02
3714 4635 2.224769 GGGACCAGTGGAACATTTCTGA 60.225 50.000 18.40 0.00 44.52 3.27
3715 4636 3.077359 GGACCAGTGGAACATTTCTGAG 58.923 50.000 18.40 0.00 44.52 3.35
3716 4637 3.077359 GACCAGTGGAACATTTCTGAGG 58.923 50.000 18.40 0.00 44.52 3.86
3717 4638 2.443255 ACCAGTGGAACATTTCTGAGGT 59.557 45.455 18.40 0.00 44.52 3.85
3718 4639 2.816087 CCAGTGGAACATTTCTGAGGTG 59.184 50.000 1.68 0.00 44.52 4.00
3719 4640 2.816087 CAGTGGAACATTTCTGAGGTGG 59.184 50.000 0.00 0.00 44.52 4.61
3720 4641 2.443255 AGTGGAACATTTCTGAGGTGGT 59.557 45.455 0.00 0.00 44.52 4.16
3721 4642 2.554032 GTGGAACATTTCTGAGGTGGTG 59.446 50.000 0.00 0.00 44.52 4.17
3722 4643 2.174639 TGGAACATTTCTGAGGTGGTGT 59.825 45.455 0.00 0.00 0.00 4.16
3723 4644 2.554032 GGAACATTTCTGAGGTGGTGTG 59.446 50.000 0.00 0.00 0.00 3.82
3724 4645 3.214328 GAACATTTCTGAGGTGGTGTGT 58.786 45.455 0.00 0.00 0.00 3.72
3725 4646 2.575532 ACATTTCTGAGGTGGTGTGTG 58.424 47.619 0.00 0.00 0.00 3.82
3726 4647 2.092429 ACATTTCTGAGGTGGTGTGTGT 60.092 45.455 0.00 0.00 0.00 3.72
3727 4648 2.799126 TTTCTGAGGTGGTGTGTGTT 57.201 45.000 0.00 0.00 0.00 3.32
3728 4649 2.325583 TTCTGAGGTGGTGTGTGTTC 57.674 50.000 0.00 0.00 0.00 3.18
3729 4650 0.468226 TCTGAGGTGGTGTGTGTTCC 59.532 55.000 0.00 0.00 0.00 3.62
3730 4651 0.180171 CTGAGGTGGTGTGTGTTCCA 59.820 55.000 0.00 0.00 0.00 3.53
3742 4663 1.577468 GTGTTCCACGTGACACATCA 58.423 50.000 26.72 11.79 44.20 3.07
3743 4664 1.937223 GTGTTCCACGTGACACATCAA 59.063 47.619 26.72 3.91 44.20 2.57
3744 4665 2.548057 GTGTTCCACGTGACACATCAAT 59.452 45.455 26.72 0.00 44.20 2.57
3745 4666 2.547634 TGTTCCACGTGACACATCAATG 59.452 45.455 19.30 0.00 36.31 2.82
3746 4667 2.805671 GTTCCACGTGACACATCAATGA 59.194 45.455 19.30 0.00 36.31 2.57
3747 4668 2.412870 TCCACGTGACACATCAATGAC 58.587 47.619 19.30 0.00 36.31 3.06
3748 4669 1.126662 CCACGTGACACATCAATGACG 59.873 52.381 19.30 0.00 36.31 4.35
3749 4670 0.790207 ACGTGACACATCAATGACGC 59.210 50.000 6.37 0.00 36.31 5.19
3750 4671 0.246873 CGTGACACATCAATGACGCG 60.247 55.000 3.53 3.53 36.31 6.01
3751 4672 0.095245 GTGACACATCAATGACGCGG 59.905 55.000 12.47 0.00 36.31 6.46
3752 4673 0.037790 TGACACATCAATGACGCGGA 60.038 50.000 12.47 0.00 0.00 5.54
3753 4674 0.647410 GACACATCAATGACGCGGAG 59.353 55.000 12.47 0.00 0.00 4.63
3754 4675 0.037326 ACACATCAATGACGCGGAGT 60.037 50.000 12.47 0.00 0.00 3.85
3762 4683 2.024871 GACGCGGAGTCTCGATGG 59.975 66.667 12.47 0.86 46.13 3.51
3763 4684 4.194720 ACGCGGAGTCTCGATGGC 62.195 66.667 12.47 0.00 0.00 4.40
3765 4686 4.194720 GCGGAGTCTCGATGGCGT 62.195 66.667 5.36 0.00 38.98 5.68
3766 4687 2.278206 CGGAGTCTCGATGGCGTG 60.278 66.667 0.00 0.00 38.98 5.34
3767 4688 2.105128 GGAGTCTCGATGGCGTGG 59.895 66.667 0.00 0.00 38.98 4.94
3768 4689 2.583593 GAGTCTCGATGGCGTGGC 60.584 66.667 0.00 0.00 38.98 5.01
3769 4690 4.498520 AGTCTCGATGGCGTGGCG 62.499 66.667 0.00 0.00 40.23 5.69
3785 4706 3.114616 CGCAGCAGGGTCTCAACG 61.115 66.667 0.00 0.00 0.00 4.10
3786 4707 2.343758 GCAGCAGGGTCTCAACGA 59.656 61.111 0.00 0.00 0.00 3.85
3787 4708 1.301716 GCAGCAGGGTCTCAACGAA 60.302 57.895 0.00 0.00 0.00 3.85
3788 4709 0.884704 GCAGCAGGGTCTCAACGAAA 60.885 55.000 0.00 0.00 0.00 3.46
3789 4710 1.151668 CAGCAGGGTCTCAACGAAAG 58.848 55.000 0.00 0.00 0.00 2.62
3803 4724 3.982576 ACGAAAGTTGCTTTAGGTTGG 57.017 42.857 0.00 0.00 46.40 3.77
3804 4725 3.547746 ACGAAAGTTGCTTTAGGTTGGA 58.452 40.909 0.00 0.00 46.40 3.53
3805 4726 4.142038 ACGAAAGTTGCTTTAGGTTGGAT 58.858 39.130 0.00 0.00 46.40 3.41
3806 4727 4.023193 ACGAAAGTTGCTTTAGGTTGGATG 60.023 41.667 0.00 0.00 46.40 3.51
3807 4728 4.215399 CGAAAGTTGCTTTAGGTTGGATGA 59.785 41.667 0.00 0.00 33.49 2.92
3808 4729 5.617751 CGAAAGTTGCTTTAGGTTGGATGAG 60.618 44.000 0.00 0.00 33.49 2.90
3809 4730 3.084786 AGTTGCTTTAGGTTGGATGAGC 58.915 45.455 0.00 0.00 0.00 4.26
3810 4731 2.819608 GTTGCTTTAGGTTGGATGAGCA 59.180 45.455 0.00 0.00 38.26 4.26
3811 4732 3.370840 TGCTTTAGGTTGGATGAGCAT 57.629 42.857 0.00 0.00 35.43 3.79
3812 4733 4.502105 TGCTTTAGGTTGGATGAGCATA 57.498 40.909 0.00 0.00 35.43 3.14
3813 4734 4.454678 TGCTTTAGGTTGGATGAGCATAG 58.545 43.478 0.00 0.00 35.43 2.23
3814 4735 3.817647 GCTTTAGGTTGGATGAGCATAGG 59.182 47.826 0.00 0.00 0.00 2.57
3815 4736 4.392940 CTTTAGGTTGGATGAGCATAGGG 58.607 47.826 0.00 0.00 0.00 3.53
3816 4737 2.196742 AGGTTGGATGAGCATAGGGA 57.803 50.000 0.00 0.00 0.00 4.20
3817 4738 2.053244 AGGTTGGATGAGCATAGGGAG 58.947 52.381 0.00 0.00 0.00 4.30
3818 4739 1.072965 GGTTGGATGAGCATAGGGAGG 59.927 57.143 0.00 0.00 0.00 4.30
3819 4740 1.771255 GTTGGATGAGCATAGGGAGGT 59.229 52.381 0.00 0.00 0.00 3.85
3820 4741 1.427809 TGGATGAGCATAGGGAGGTG 58.572 55.000 0.00 0.00 0.00 4.00
3821 4742 0.689623 GGATGAGCATAGGGAGGTGG 59.310 60.000 0.00 0.00 0.00 4.61
3822 4743 0.036022 GATGAGCATAGGGAGGTGGC 59.964 60.000 0.00 0.00 0.00 5.01
3823 4744 1.422161 ATGAGCATAGGGAGGTGGCC 61.422 60.000 0.00 0.00 0.00 5.36
3830 4751 2.936032 GGGAGGTGGCCCTGTCTT 60.936 66.667 0.00 0.00 42.86 3.01
3831 4752 2.352805 GGAGGTGGCCCTGTCTTG 59.647 66.667 0.00 0.00 42.86 3.02
3832 4753 2.360475 GAGGTGGCCCTGTCTTGC 60.360 66.667 0.00 0.00 42.86 4.01
3833 4754 4.335647 AGGTGGCCCTGTCTTGCG 62.336 66.667 0.00 0.00 40.58 4.85
3834 4755 4.643387 GGTGGCCCTGTCTTGCGT 62.643 66.667 0.00 0.00 0.00 5.24
3835 4756 3.050275 GTGGCCCTGTCTTGCGTC 61.050 66.667 0.00 0.00 0.00 5.19
3836 4757 3.555324 TGGCCCTGTCTTGCGTCA 61.555 61.111 0.00 0.00 0.00 4.35
3837 4758 2.045926 GGCCCTGTCTTGCGTCAT 60.046 61.111 0.00 0.00 0.00 3.06
3838 4759 1.675641 GGCCCTGTCTTGCGTCATT 60.676 57.895 0.00 0.00 0.00 2.57
3839 4760 1.503542 GCCCTGTCTTGCGTCATTG 59.496 57.895 0.00 0.00 0.00 2.82
3840 4761 1.503542 CCCTGTCTTGCGTCATTGC 59.496 57.895 0.00 0.00 0.00 3.56
3841 4762 1.236616 CCCTGTCTTGCGTCATTGCA 61.237 55.000 0.00 0.00 44.61 4.08
3842 4763 0.806868 CCTGTCTTGCGTCATTGCAT 59.193 50.000 0.00 0.00 45.78 3.96
3843 4764 1.202110 CCTGTCTTGCGTCATTGCATC 60.202 52.381 0.00 0.00 45.78 3.91
3844 4765 0.443478 TGTCTTGCGTCATTGCATCG 59.557 50.000 0.00 0.00 45.78 3.84
3845 4766 0.443869 GTCTTGCGTCATTGCATCGT 59.556 50.000 0.00 0.00 45.78 3.73
3846 4767 1.135972 GTCTTGCGTCATTGCATCGTT 60.136 47.619 0.00 0.00 45.78 3.85
3847 4768 1.136000 TCTTGCGTCATTGCATCGTTG 60.136 47.619 0.00 0.00 45.78 4.10
3848 4769 0.871057 TTGCGTCATTGCATCGTTGA 59.129 45.000 0.00 0.00 45.78 3.18
3849 4770 0.165727 TGCGTCATTGCATCGTTGAC 59.834 50.000 0.00 8.67 40.62 3.18
3852 4773 2.145053 GTCATTGCATCGTTGACGTC 57.855 50.000 9.11 9.11 40.80 4.34
3853 4774 1.459209 GTCATTGCATCGTTGACGTCA 59.541 47.619 15.76 15.76 40.80 4.35
3854 4775 1.726248 TCATTGCATCGTTGACGTCAG 59.274 47.619 19.11 8.46 40.80 3.51
3855 4776 1.078709 ATTGCATCGTTGACGTCAGG 58.921 50.000 19.11 14.67 40.80 3.86
3856 4777 1.565156 TTGCATCGTTGACGTCAGGC 61.565 55.000 19.11 17.33 40.80 4.85
3857 4778 1.738099 GCATCGTTGACGTCAGGCT 60.738 57.895 19.11 3.83 40.80 4.58
3858 4779 1.291877 GCATCGTTGACGTCAGGCTT 61.292 55.000 19.11 2.89 40.80 4.35
3859 4780 0.439985 CATCGTTGACGTCAGGCTTG 59.560 55.000 19.11 11.59 40.80 4.01
3860 4781 0.670546 ATCGTTGACGTCAGGCTTGG 60.671 55.000 19.11 5.88 40.80 3.61
3861 4782 1.300620 CGTTGACGTCAGGCTTGGA 60.301 57.895 19.11 0.00 34.11 3.53
3862 4783 0.878523 CGTTGACGTCAGGCTTGGAA 60.879 55.000 19.11 0.00 34.11 3.53
3863 4784 1.305201 GTTGACGTCAGGCTTGGAAA 58.695 50.000 19.11 0.00 0.00 3.13
3864 4785 4.242960 CGTTGACGTCAGGCTTGGAAAG 62.243 54.545 19.11 0.00 39.98 2.62
3865 4786 0.250295 TGACGTCAGGCTTGGAAAGG 60.250 55.000 15.76 0.00 46.35 3.11
3866 4787 0.250338 GACGTCAGGCTTGGAAAGGT 60.250 55.000 11.55 0.00 46.35 3.50
3867 4788 0.535102 ACGTCAGGCTTGGAAAGGTG 60.535 55.000 0.00 0.00 46.35 4.00
3868 4789 0.250295 CGTCAGGCTTGGAAAGGTGA 60.250 55.000 0.00 0.00 46.35 4.02
3869 4790 1.813862 CGTCAGGCTTGGAAAGGTGAA 60.814 52.381 0.00 0.00 46.35 3.18
3870 4791 2.519013 GTCAGGCTTGGAAAGGTGAAT 58.481 47.619 0.00 0.00 46.35 2.57
3871 4792 2.229784 GTCAGGCTTGGAAAGGTGAATG 59.770 50.000 0.00 0.00 46.35 2.67
3872 4793 1.067354 CAGGCTTGGAAAGGTGAATGC 60.067 52.381 0.00 0.00 46.35 3.56
3873 4794 0.109132 GGCTTGGAAAGGTGAATGCG 60.109 55.000 0.00 0.00 46.35 4.73
3874 4795 0.598065 GCTTGGAAAGGTGAATGCGT 59.402 50.000 0.00 0.00 46.35 5.24
3875 4796 1.000274 GCTTGGAAAGGTGAATGCGTT 60.000 47.619 0.00 0.00 46.35 4.84
3876 4797 2.545742 GCTTGGAAAGGTGAATGCGTTT 60.546 45.455 0.00 0.00 46.35 3.60
3877 4798 3.716601 CTTGGAAAGGTGAATGCGTTTT 58.283 40.909 0.00 0.00 41.27 2.43
4075 4997 3.039011 GGACTCTTGTTATCCTAGGCCA 58.961 50.000 5.01 0.00 35.28 5.36
4241 5165 6.326583 CAGGAAGTAGGGTATTACCTTCATCA 59.673 42.308 12.54 0.00 42.09 3.07
4320 5245 3.637273 GCACAGTTCGGGACCCCT 61.637 66.667 4.46 0.00 0.00 4.79
4371 5297 3.057033 ACATTGGTGCTTTCATTGAGAGC 60.057 43.478 19.43 19.43 39.74 4.09
4416 5342 1.756538 TCAATGGCTCGACTGCAGATA 59.243 47.619 23.35 3.88 34.04 1.98
4437 5363 0.320771 ACTGCGACATCGGCTTCTTT 60.321 50.000 3.08 0.00 40.23 2.52
4446 5372 1.597027 CGGCTTCTTTGTCACCGGT 60.597 57.895 0.00 0.00 40.18 5.28
4480 5406 3.386237 GCTGGACCGAGGACTGCT 61.386 66.667 0.00 0.00 0.00 4.24
4495 5421 0.468214 CTGCTCCCTACCTCCGATCA 60.468 60.000 0.00 0.00 0.00 2.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 1.816835 CTCATTGAAGTGCTGCCACAT 59.183 47.619 0.00 0.00 44.53 3.21
136 137 3.583380 TGCCCTCTTTGCCAGCCT 61.583 61.111 0.00 0.00 0.00 4.58
184 193 4.129737 TGTAGGCGAGCTCGTGGC 62.130 66.667 34.46 20.88 42.22 5.01
204 213 4.789075 GCACGCCGAGCCGTAGAA 62.789 66.667 0.00 0.00 39.83 2.10
237 246 1.741327 GCGGCAGCCCATGAATTCAT 61.741 55.000 15.36 15.36 37.42 2.57
282 291 5.816258 TCACACACACGGACAAACTAAAATA 59.184 36.000 0.00 0.00 0.00 1.40
385 404 1.429463 CGGCCAAGAATAGATACCGC 58.571 55.000 2.24 0.00 31.85 5.68
399 418 4.424711 GCAGTTCATCCCCGGCCA 62.425 66.667 2.24 0.00 0.00 5.36
418 437 3.066291 TCGCCCTAAGAGAATTTTGCA 57.934 42.857 0.00 0.00 0.00 4.08
427 446 2.660189 TTTACGGTTCGCCCTAAGAG 57.340 50.000 0.00 0.00 0.00 2.85
477 496 2.229792 AGCAGAACAGATTCCGCAAAA 58.770 42.857 0.00 0.00 40.20 2.44
485 504 4.405036 TGAGCATCTCTAGCAGAACAGATT 59.595 41.667 0.00 0.00 33.62 2.40
508 527 6.573289 GCCTAGCTCACAATACTGCACTATAT 60.573 42.308 0.00 0.00 0.00 0.86
517 536 2.420687 GCTTGGCCTAGCTCACAATACT 60.421 50.000 28.96 0.00 38.15 2.12
564 583 3.305516 GCCAAAGGTGCCACCAGG 61.306 66.667 17.80 15.43 41.95 4.45
565 584 2.091102 CTTGCCAAAGGTGCCACCAG 62.091 60.000 17.80 5.32 41.95 4.00
566 585 2.042537 TTGCCAAAGGTGCCACCA 60.043 55.556 17.80 0.00 41.95 4.17
567 586 2.736531 CTTGCCAAAGGTGCCACC 59.263 61.111 5.50 5.50 38.99 4.61
568 587 2.736531 CCTTGCCAAAGGTGCCAC 59.263 61.111 0.00 0.00 46.97 5.01
587 606 5.530915 TGTTGGGTTTAAGATTCTGTCAGTG 59.469 40.000 0.00 0.00 0.00 3.66
595 614 5.756347 GTGGGTTTTGTTGGGTTTAAGATTC 59.244 40.000 0.00 0.00 0.00 2.52
640 659 3.929610 TGCGTGGTTTTCCTTTTCTTTTG 59.070 39.130 0.00 0.00 41.38 2.44
651 670 1.079503 CTAGCTCCTGCGTGGTTTTC 58.920 55.000 0.00 0.00 45.42 2.29
665 684 3.636231 TGGTTGCCGTGCCTAGCT 61.636 61.111 0.00 0.00 0.00 3.32
668 687 2.281208 GTGTGGTTGCCGTGCCTA 60.281 61.111 0.00 0.00 0.00 3.93
670 689 3.964875 CTGTGTGGTTGCCGTGCC 61.965 66.667 0.00 0.00 0.00 5.01
676 695 0.808125 TGTGTGAACTGTGTGGTTGC 59.192 50.000 0.00 0.00 0.00 4.17
683 702 4.159377 ACTTTTGTGTGTGTGAACTGTG 57.841 40.909 0.00 0.00 0.00 3.66
706 725 4.857588 CGTTCGTCTGCTATACTCTTGTTT 59.142 41.667 0.00 0.00 0.00 2.83
718 737 0.318784 GGTTCTGTCGTTCGTCTGCT 60.319 55.000 0.00 0.00 0.00 4.24
732 751 3.359950 GGCATCTTCTTTGGATGGTTCT 58.640 45.455 0.00 0.00 40.40 3.01
748 767 1.346068 GGAGATGGAGTGTAGGGCATC 59.654 57.143 0.00 0.00 0.00 3.91
750 769 0.042581 TGGAGATGGAGTGTAGGGCA 59.957 55.000 0.00 0.00 0.00 5.36
770 789 2.910199 TGAATGTGCAGCTAGATGGTC 58.090 47.619 10.52 0.00 0.00 4.02
808 855 3.584947 GCTTTGGAGCCTTGGAGAT 57.415 52.632 0.00 0.00 43.29 2.75
822 869 0.035820 TCCATTAACGGGCGAGCTTT 60.036 50.000 0.00 0.00 0.00 3.51
830 877 2.159382 ACTTGCTTGTCCATTAACGGG 58.841 47.619 0.00 0.00 0.00 5.28
831 878 5.236478 CCTATACTTGCTTGTCCATTAACGG 59.764 44.000 0.00 0.00 0.00 4.44
841 888 5.105635 TGCTACGTTACCTATACTTGCTTGT 60.106 40.000 0.00 0.00 0.00 3.16
852 899 0.734889 GGCGAGTGCTACGTTACCTA 59.265 55.000 0.00 0.00 42.25 3.08
884 931 2.336478 CGCACGAGACTCTCCCACT 61.336 63.158 0.03 0.00 0.00 4.00
886 933 2.282251 ACGCACGAGACTCTCCCA 60.282 61.111 0.03 0.00 0.00 4.37
906 953 3.365472 GGATGGAAACCTTTATGTGGCT 58.635 45.455 0.00 0.00 0.00 4.75
946 993 1.410517 GATCACCTGCTGATCGGAAGA 59.589 52.381 11.56 0.00 44.71 2.87
953 1014 2.507944 GCCGGATCACCTGCTGAT 59.492 61.111 5.05 0.00 42.84 2.90
969 1032 3.543536 GATGGAGCGGATCTGGGGC 62.544 68.421 3.14 0.00 0.00 5.80
971 1034 1.070445 GTGATGGAGCGGATCTGGG 59.930 63.158 3.14 0.00 0.00 4.45
986 1049 2.439409 CTGCCATTGTTGAGGATGTGA 58.561 47.619 0.00 0.00 0.00 3.58
1015 1078 2.844839 GTCTAGCCGGGCCCTGAT 60.845 66.667 22.43 15.96 0.00 2.90
1069 1132 2.421739 GATGGGATGACGACGGGG 59.578 66.667 0.00 0.00 0.00 5.73
1073 1136 0.469917 ACATGGGATGGGATGACGAC 59.530 55.000 0.00 0.00 33.60 4.34
1079 1142 2.057922 GAGGTGTACATGGGATGGGAT 58.942 52.381 0.00 0.00 33.60 3.85
1080 1143 1.507140 GAGGTGTACATGGGATGGGA 58.493 55.000 0.00 0.00 33.60 4.37
1081 1144 0.106708 CGAGGTGTACATGGGATGGG 59.893 60.000 0.00 0.00 33.60 4.00
1082 1145 0.106708 CCGAGGTGTACATGGGATGG 59.893 60.000 0.00 0.00 33.60 3.51
1083 1146 0.532862 GCCGAGGTGTACATGGGATG 60.533 60.000 0.00 0.00 0.00 3.51
1084 1147 1.696097 GGCCGAGGTGTACATGGGAT 61.696 60.000 0.00 0.00 0.00 3.85
1132 1201 3.712187 GAAGGCGAAGATGAACTAGGAG 58.288 50.000 0.00 0.00 0.00 3.69
1133 1202 2.099263 CGAAGGCGAAGATGAACTAGGA 59.901 50.000 0.00 0.00 40.82 2.94
1134 1203 2.099263 TCGAAGGCGAAGATGAACTAGG 59.901 50.000 0.00 0.00 44.78 3.02
1135 1204 3.422417 TCGAAGGCGAAGATGAACTAG 57.578 47.619 0.00 0.00 44.78 2.57
1147 1216 1.325640 CACATGACAAGATCGAAGGCG 59.674 52.381 0.00 0.00 39.35 5.52
1155 1224 6.531923 CCCTAGATGAATCACATGACAAGAT 58.468 40.000 0.00 0.00 39.56 2.40
1156 1225 5.685861 GCCCTAGATGAATCACATGACAAGA 60.686 44.000 0.00 0.00 39.56 3.02
1157 1226 4.514441 GCCCTAGATGAATCACATGACAAG 59.486 45.833 0.00 0.00 39.56 3.16
1158 1227 4.080413 TGCCCTAGATGAATCACATGACAA 60.080 41.667 0.00 0.00 39.56 3.18
1159 1228 3.455543 TGCCCTAGATGAATCACATGACA 59.544 43.478 0.00 0.00 39.56 3.58
1209 1279 1.134401 TGCCATTCTCTTCCATCGACC 60.134 52.381 0.00 0.00 0.00 4.79
1219 1289 4.315588 GCTGCAGTGCCATTCTCT 57.684 55.556 16.64 0.00 0.00 3.10
1250 1320 3.099905 TGAAGAGGTTGATCATCTCGGT 58.900 45.455 16.17 10.95 36.08 4.69
1358 1428 3.902086 GAGTACCCGAGCGAGCCC 61.902 72.222 0.00 0.00 0.00 5.19
1382 1456 2.771089 TCGCAAAGCAGAGAAGACAAT 58.229 42.857 0.00 0.00 0.00 2.71
1488 2047 3.447586 GCAGGGAAAGAAAGGGTTTATCC 59.552 47.826 0.00 0.00 0.00 2.59
1526 2088 6.091169 GGATGCAACAAAGAAACAACCATATG 59.909 38.462 0.00 0.00 0.00 1.78
1532 2094 6.033831 CGATATGGATGCAACAAAGAAACAAC 59.966 38.462 0.00 0.00 0.00 3.32
1541 2103 3.604582 TCACACGATATGGATGCAACAA 58.395 40.909 0.00 0.00 0.00 2.83
1565 2129 0.951558 GCCCATGACAAACACGTCTT 59.048 50.000 0.00 0.00 36.82 3.01
1623 2192 5.220777 GCACAGCTAAATTCGGCAACTATAA 60.221 40.000 0.00 0.00 0.00 0.98
1626 2195 2.418628 GCACAGCTAAATTCGGCAACTA 59.581 45.455 0.00 0.00 0.00 2.24
1628 2197 1.200020 AGCACAGCTAAATTCGGCAAC 59.800 47.619 0.00 0.00 36.99 4.17
1653 2222 9.753674 AATGATTAATTCGGGTACATCCATTAT 57.246 29.630 0.00 0.00 38.11 1.28
1667 2236 8.659569 ACGCATAATAGCAAATGATTAATTCG 57.340 30.769 0.00 0.00 0.00 3.34
1696 2339 3.895704 ACCAGAAAAACTACCATGGGT 57.104 42.857 18.09 1.61 40.16 4.51
1699 2342 6.404293 CCCGATAAACCAGAAAAACTACCATG 60.404 42.308 0.00 0.00 0.00 3.66
1719 2362 1.460273 GCAAACAACACCACCCCGAT 61.460 55.000 0.00 0.00 0.00 4.18
1724 2389 0.528249 CAGCTGCAAACAACACCACC 60.528 55.000 0.00 0.00 0.00 4.61
1732 2397 2.734606 GTGTATACGACAGCTGCAAACA 59.265 45.455 15.27 7.20 39.29 2.83
1739 2404 2.492088 TGCTTGAGTGTATACGACAGCT 59.508 45.455 11.38 0.00 39.29 4.24
1741 2406 6.495706 TCTTATGCTTGAGTGTATACGACAG 58.504 40.000 0.00 0.00 39.29 3.51
1759 2424 5.960113 ACACAACTAGACTCAGCTCTTATG 58.040 41.667 0.00 0.00 0.00 1.90
1764 2429 4.918583 GTGTAACACAACTAGACTCAGCTC 59.081 45.833 0.00 0.00 36.32 4.09
1790 2458 3.417101 TGGCAGGAATAACGACAATTGT 58.583 40.909 11.78 11.78 0.00 2.71
1791 2459 4.165779 GTTGGCAGGAATAACGACAATTG 58.834 43.478 3.24 3.24 0.00 2.32
1793 2461 2.418628 CGTTGGCAGGAATAACGACAAT 59.581 45.455 1.08 0.00 38.97 2.71
1812 2480 1.019673 CAGAGCAATAGCATTGCCGT 58.980 50.000 22.14 12.18 45.98 5.68
1813 2481 0.317603 GCAGAGCAATAGCATTGCCG 60.318 55.000 22.14 15.32 45.98 5.69
1815 2483 1.269102 CCTGCAGAGCAATAGCATTGC 60.269 52.381 17.39 19.73 46.22 3.56
1816 2484 1.337071 CCCTGCAGAGCAATAGCATTG 59.663 52.381 17.39 4.97 45.49 2.82
1818 2486 0.841961 TCCCTGCAGAGCAATAGCAT 59.158 50.000 17.39 0.00 45.49 3.79
1819 2487 0.620030 TTCCCTGCAGAGCAATAGCA 59.380 50.000 17.39 0.00 45.49 3.49
1820 2488 1.020437 GTTCCCTGCAGAGCAATAGC 58.980 55.000 17.39 0.00 38.41 2.97
1821 2489 2.012673 GTGTTCCCTGCAGAGCAATAG 58.987 52.381 17.39 0.00 38.41 1.73
1825 2493 0.183492 AAAGTGTTCCCTGCAGAGCA 59.817 50.000 17.39 1.16 36.92 4.26
1834 2502 1.002792 GCAAGACGACAAAGTGTTCCC 60.003 52.381 0.00 0.00 0.00 3.97
1889 2557 7.760340 CCGTCCTAGAATATTCCATTAGCTAAC 59.240 40.741 8.70 5.59 0.00 2.34
1893 2561 4.870991 GCCGTCCTAGAATATTCCATTAGC 59.129 45.833 11.92 3.72 0.00 3.09
1912 2580 5.469479 CAGAACCAGAATTTTTATTGCCGT 58.531 37.500 0.00 0.00 0.00 5.68
1927 2600 3.068590 ACCAGAAATGTTTGCAGAACCAG 59.931 43.478 8.60 0.00 0.00 4.00
1928 2601 3.030291 ACCAGAAATGTTTGCAGAACCA 58.970 40.909 8.60 0.00 0.00 3.67
1941 2615 9.986157 ATATAGCAAATCATGGATACCAGAAAT 57.014 29.630 0.00 0.00 36.75 2.17
1972 2646 6.157904 CAGCAAAATGACCATTGATGTTACA 58.842 36.000 0.00 0.00 37.96 2.41
2000 2674 7.772332 AAGAAACAACATCGATATAGTGGAC 57.228 36.000 0.00 0.00 0.00 4.02
2001 2675 8.786826 AAAAGAAACAACATCGATATAGTGGA 57.213 30.769 0.00 0.00 0.00 4.02
2002 2676 8.122952 GGAAAAGAAACAACATCGATATAGTGG 58.877 37.037 0.00 0.00 0.00 4.00
2007 2705 8.522830 ACATTGGAAAAGAAACAACATCGATAT 58.477 29.630 0.00 0.00 0.00 1.63
2041 2739 1.555967 GTACACACCCCATGCCAAAT 58.444 50.000 0.00 0.00 0.00 2.32
2042 2740 0.891449 CGTACACACCCCATGCCAAA 60.891 55.000 0.00 0.00 0.00 3.28
2043 2741 1.302913 CGTACACACCCCATGCCAA 60.303 57.895 0.00 0.00 0.00 4.52
2044 2742 2.349376 CGTACACACCCCATGCCA 59.651 61.111 0.00 0.00 0.00 4.92
2045 2743 1.743995 GACGTACACACCCCATGCC 60.744 63.158 0.00 0.00 0.00 4.40
2046 2744 0.392461 ATGACGTACACACCCCATGC 60.392 55.000 0.00 0.00 0.00 4.06
2047 2745 1.368641 CATGACGTACACACCCCATG 58.631 55.000 0.00 0.00 0.00 3.66
2048 2746 0.251916 CCATGACGTACACACCCCAT 59.748 55.000 0.00 0.00 0.00 4.00
2049 2747 1.674637 CCATGACGTACACACCCCA 59.325 57.895 0.00 0.00 0.00 4.96
2079 2777 3.650070 ATATGACAGCACGATCGACAT 57.350 42.857 24.34 16.87 0.00 3.06
2119 2817 5.682943 TTACACAGCACACAACTAAATCC 57.317 39.130 0.00 0.00 0.00 3.01
2120 2818 6.668323 ACATTACACAGCACACAACTAAATC 58.332 36.000 0.00 0.00 0.00 2.17
2126 2824 6.205784 ACAATTACATTACACAGCACACAAC 58.794 36.000 0.00 0.00 0.00 3.32
2133 2831 9.158364 CGAATATCAACAATTACATTACACAGC 57.842 33.333 0.00 0.00 0.00 4.40
2138 2836 8.126074 TGGCACGAATATCAACAATTACATTAC 58.874 33.333 0.00 0.00 0.00 1.89
2193 2891 9.039870 GTAGTACTAGAGATATGTACAACACGT 57.960 37.037 1.87 0.00 39.02 4.49
2287 2985 4.016444 GCCATTTCCTATCAAGGTTGTCA 58.984 43.478 0.00 0.00 44.09 3.58
2295 2993 4.018506 TGTGAAGGAGCCATTTCCTATCAA 60.019 41.667 0.00 0.00 46.90 2.57
2301 2999 5.859205 AATATTGTGAAGGAGCCATTTCC 57.141 39.130 0.00 0.00 37.52 3.13
2304 3002 9.812347 TCATAATAATATTGTGAAGGAGCCATT 57.188 29.630 9.51 0.00 0.00 3.16
2305 3003 9.986157 ATCATAATAATATTGTGAAGGAGCCAT 57.014 29.630 14.73 0.00 0.00 4.40
2327 3025 8.749354 TCAACATAACCATACTAGCGATATCAT 58.251 33.333 3.12 0.00 0.00 2.45
2328 3026 8.117813 TCAACATAACCATACTAGCGATATCA 57.882 34.615 3.12 0.00 0.00 2.15
2329 3027 9.239002 GATCAACATAACCATACTAGCGATATC 57.761 37.037 0.00 0.00 0.00 1.63
2330 3028 8.749354 TGATCAACATAACCATACTAGCGATAT 58.251 33.333 0.00 0.00 0.00 1.63
2350 3048 2.359848 GCTATTGTGGCATGCTGATCAA 59.640 45.455 18.92 16.51 0.00 2.57
2351 3049 1.951602 GCTATTGTGGCATGCTGATCA 59.048 47.619 18.92 3.67 0.00 2.92
2357 3055 2.842208 TAAACGCTATTGTGGCATGC 57.158 45.000 9.90 9.90 0.00 4.06
2362 3060 6.724263 TCATGCTTATTAAACGCTATTGTGG 58.276 36.000 0.00 0.00 0.00 4.17
2383 3093 7.637511 AGATCAGGACACTAAGGATTTTTCAT 58.362 34.615 0.00 0.00 0.00 2.57
2394 3104 6.948886 ACAGAAGAGTAAGATCAGGACACTAA 59.051 38.462 0.00 0.00 0.00 2.24
2410 3120 6.842437 ACACTGATACATACACAGAAGAGT 57.158 37.500 0.00 0.00 35.85 3.24
2418 3128 4.253685 AGCACCAACACTGATACATACAC 58.746 43.478 0.00 0.00 0.00 2.90
2480 3190 2.831685 TCTTTGCTTCTTGGCTCGTA 57.168 45.000 0.00 0.00 0.00 3.43
2482 3192 2.351157 CCTTTCTTTGCTTCTTGGCTCG 60.351 50.000 0.00 0.00 0.00 5.03
2548 3303 9.376075 CTATGAGCTAAATATAGATGGTGTTGG 57.624 37.037 0.00 0.00 0.00 3.77
2550 3305 8.043710 GGCTATGAGCTAAATATAGATGGTGTT 58.956 37.037 9.64 0.00 41.99 3.32
2556 3311 8.929487 GGTTAGGGCTATGAGCTAAATATAGAT 58.071 37.037 9.64 0.00 41.99 1.98
2576 3386 3.942829 TGAAGTGAATGAGCAGGTTAGG 58.057 45.455 0.00 0.00 0.00 2.69
2588 3410 4.099881 ACAGTGGTTGCAAATGAAGTGAAT 59.900 37.500 0.00 0.00 0.00 2.57
2670 3554 3.368427 CGGAAAGCATAACCTCTGTCTGA 60.368 47.826 0.00 0.00 0.00 3.27
2673 3557 3.247006 TCGGAAAGCATAACCTCTGTC 57.753 47.619 0.00 0.00 0.00 3.51
2674 3558 3.335579 GTTCGGAAAGCATAACCTCTGT 58.664 45.455 0.00 0.00 0.00 3.41
2686 3571 4.124238 TGAACTAACAGTGGTTCGGAAAG 58.876 43.478 12.29 0.00 45.60 2.62
2808 3695 2.280119 TCGAACTTGCTGCGCACT 60.280 55.556 5.66 0.00 38.71 4.40
2851 3738 2.436417 AGTCAAAGCCAACATACGCAT 58.564 42.857 0.00 0.00 0.00 4.73
2943 3831 6.585695 ATCAACAGCAACAAGAATGAGATT 57.414 33.333 0.00 0.00 0.00 2.40
2994 3882 7.982371 AGACATAAACGTTTTAGATACCTCG 57.018 36.000 20.19 0.00 0.00 4.63
3008 3896 9.051027 GTGATGACACAAATTAAGACATAAACG 57.949 33.333 0.00 0.00 45.32 3.60
3013 3901 7.615582 ATCGTGATGACACAAATTAAGACAT 57.384 32.000 0.00 0.00 46.20 3.06
3025 3913 3.549471 CAGCTACTGAATCGTGATGACAC 59.451 47.826 0.00 0.00 37.38 3.67
3088 3976 7.855904 CAGTATTTGGCTAAGCTTAATTTACGG 59.144 37.037 7.74 0.00 0.00 4.02
3109 3997 8.511748 AGGTGGTTGATATCTTATTCCAGTAT 57.488 34.615 3.98 0.00 0.00 2.12
3211 4104 5.047519 CCTCCAGCTTCATCAAAAGAACAAT 60.048 40.000 0.00 0.00 0.00 2.71
3214 4107 4.074970 TCCTCCAGCTTCATCAAAAGAAC 58.925 43.478 0.00 0.00 0.00 3.01
3261 4154 6.704050 GCTCTTTTTCCTTCCATAGCTACTAG 59.296 42.308 0.00 0.00 0.00 2.57
3287 4180 1.346068 GGAGGGATCACATGGAGCTAC 59.654 57.143 0.00 0.00 30.93 3.58
3313 4206 2.558795 CTGGAGAGATACATACACCCCG 59.441 54.545 0.00 0.00 0.00 5.73
3340 4234 4.941263 GCCAGACACCTATTGAACATTGTA 59.059 41.667 0.00 0.00 0.00 2.41
3371 4265 8.627208 ATTCCTCATGTTATTTCATAATCGCT 57.373 30.769 0.00 0.00 0.00 4.93
3405 4299 1.271102 GACTTGCGAGACTGGAGTTCT 59.729 52.381 8.31 0.00 0.00 3.01
3431 4344 8.266392 ACATTGACACATCACAAAATGTTTTT 57.734 26.923 0.00 0.00 37.78 1.94
3439 4352 5.125356 ACAGAGACATTGACACATCACAAA 58.875 37.500 0.00 0.00 33.38 2.83
3444 4357 4.993584 AGTTGACAGAGACATTGACACATC 59.006 41.667 0.00 0.00 0.00 3.06
3536 4456 3.994204 ACAAAACCAATTCACCGGTAC 57.006 42.857 6.87 0.00 33.17 3.34
3540 4460 5.285651 ACATACAACAAAACCAATTCACCG 58.714 37.500 0.00 0.00 0.00 4.94
3558 4478 0.535335 TCGGAGAGCCCACAACATAC 59.465 55.000 0.00 0.00 34.14 2.39
3576 4496 7.247019 GCATTCCAAAAGACAGTAAAGAGATC 58.753 38.462 0.00 0.00 0.00 2.75
3653 4574 1.414919 CAAGAATGATGCCCCCAATGG 59.585 52.381 0.00 0.00 0.00 3.16
3654 4575 1.414919 CCAAGAATGATGCCCCCAATG 59.585 52.381 0.00 0.00 0.00 2.82
3655 4576 1.291637 TCCAAGAATGATGCCCCCAAT 59.708 47.619 0.00 0.00 0.00 3.16
3656 4577 0.709397 TCCAAGAATGATGCCCCCAA 59.291 50.000 0.00 0.00 0.00 4.12
3657 4578 0.259647 CTCCAAGAATGATGCCCCCA 59.740 55.000 0.00 0.00 0.00 4.96
3658 4579 0.468771 CCTCCAAGAATGATGCCCCC 60.469 60.000 0.00 0.00 0.00 5.40
3659 4580 0.259938 ACCTCCAAGAATGATGCCCC 59.740 55.000 0.00 0.00 0.00 5.80
3660 4581 1.341383 ACACCTCCAAGAATGATGCCC 60.341 52.381 0.00 0.00 0.00 5.36
3661 4582 1.747355 CACACCTCCAAGAATGATGCC 59.253 52.381 0.00 0.00 0.00 4.40
3662 4583 1.133790 GCACACCTCCAAGAATGATGC 59.866 52.381 0.00 0.00 0.00 3.91
3663 4584 2.439409 TGCACACCTCCAAGAATGATG 58.561 47.619 0.00 0.00 0.00 3.07
3664 4585 2.885135 TGCACACCTCCAAGAATGAT 57.115 45.000 0.00 0.00 0.00 2.45
3665 4586 2.715046 GATGCACACCTCCAAGAATGA 58.285 47.619 0.00 0.00 0.00 2.57
3666 4587 1.399440 CGATGCACACCTCCAAGAATG 59.601 52.381 0.00 0.00 0.00 2.67
3667 4588 1.278985 TCGATGCACACCTCCAAGAAT 59.721 47.619 0.00 0.00 0.00 2.40
3668 4589 0.684535 TCGATGCACACCTCCAAGAA 59.315 50.000 0.00 0.00 0.00 2.52
3669 4590 0.037326 GTCGATGCACACCTCCAAGA 60.037 55.000 0.00 0.00 0.00 3.02
3670 4591 0.036952 AGTCGATGCACACCTCCAAG 60.037 55.000 0.00 0.00 0.00 3.61
3671 4592 0.037326 GAGTCGATGCACACCTCCAA 60.037 55.000 0.00 0.00 0.00 3.53
3672 4593 1.591703 GAGTCGATGCACACCTCCA 59.408 57.895 0.00 0.00 0.00 3.86
3673 4594 1.517257 CGAGTCGATGCACACCTCC 60.517 63.158 6.73 0.00 0.00 4.30
3674 4595 0.524392 CTCGAGTCGATGCACACCTC 60.524 60.000 16.94 0.00 34.61 3.85
3675 4596 1.508545 CTCGAGTCGATGCACACCT 59.491 57.895 16.94 0.00 34.61 4.00
3676 4597 1.517257 CCTCGAGTCGATGCACACC 60.517 63.158 16.94 0.00 34.61 4.16
3677 4598 1.517257 CCCTCGAGTCGATGCACAC 60.517 63.158 16.94 0.00 34.61 3.82
3678 4599 1.677633 TCCCTCGAGTCGATGCACA 60.678 57.895 16.94 0.00 34.61 4.57
3679 4600 1.226717 GTCCCTCGAGTCGATGCAC 60.227 63.158 16.94 5.85 34.61 4.57
3680 4601 2.415608 GGTCCCTCGAGTCGATGCA 61.416 63.158 16.94 0.00 34.61 3.96
3681 4602 2.343163 CTGGTCCCTCGAGTCGATGC 62.343 65.000 16.94 6.48 34.61 3.91
3682 4603 1.032657 ACTGGTCCCTCGAGTCGATG 61.033 60.000 16.94 13.38 34.61 3.84
3683 4604 1.032657 CACTGGTCCCTCGAGTCGAT 61.033 60.000 16.94 0.00 34.61 3.59
3684 4605 1.674651 CACTGGTCCCTCGAGTCGA 60.675 63.158 15.64 15.64 32.93 4.20
3685 4606 2.701780 CCACTGGTCCCTCGAGTCG 61.702 68.421 12.31 6.09 32.93 4.18
3686 4607 0.898789 TTCCACTGGTCCCTCGAGTC 60.899 60.000 12.31 1.38 32.93 3.36
3687 4608 1.155390 TTCCACTGGTCCCTCGAGT 59.845 57.895 12.31 0.00 35.54 4.18
3688 4609 1.185618 TGTTCCACTGGTCCCTCGAG 61.186 60.000 5.13 5.13 0.00 4.04
3689 4610 0.544357 ATGTTCCACTGGTCCCTCGA 60.544 55.000 0.00 0.00 0.00 4.04
3690 4611 0.324943 AATGTTCCACTGGTCCCTCG 59.675 55.000 0.00 0.00 0.00 4.63
3691 4612 2.040412 AGAAATGTTCCACTGGTCCCTC 59.960 50.000 0.00 0.00 0.00 4.30
3692 4613 2.065799 AGAAATGTTCCACTGGTCCCT 58.934 47.619 0.00 0.00 0.00 4.20
3693 4614 2.162681 CAGAAATGTTCCACTGGTCCC 58.837 52.381 0.00 0.00 0.00 4.46
3694 4615 3.077359 CTCAGAAATGTTCCACTGGTCC 58.923 50.000 0.00 0.00 0.00 4.46
3695 4616 3.077359 CCTCAGAAATGTTCCACTGGTC 58.923 50.000 0.00 0.00 0.00 4.02
3696 4617 2.443255 ACCTCAGAAATGTTCCACTGGT 59.557 45.455 0.00 0.00 0.00 4.00
3697 4618 2.816087 CACCTCAGAAATGTTCCACTGG 59.184 50.000 0.00 0.00 0.00 4.00
3698 4619 2.816087 CCACCTCAGAAATGTTCCACTG 59.184 50.000 0.00 0.00 0.00 3.66
3699 4620 2.443255 ACCACCTCAGAAATGTTCCACT 59.557 45.455 0.00 0.00 0.00 4.00
3700 4621 2.554032 CACCACCTCAGAAATGTTCCAC 59.446 50.000 0.00 0.00 0.00 4.02
3701 4622 2.174639 ACACCACCTCAGAAATGTTCCA 59.825 45.455 0.00 0.00 0.00 3.53
3702 4623 2.554032 CACACCACCTCAGAAATGTTCC 59.446 50.000 0.00 0.00 0.00 3.62
3703 4624 3.003689 CACACACCACCTCAGAAATGTTC 59.996 47.826 0.00 0.00 0.00 3.18
3704 4625 2.951642 CACACACCACCTCAGAAATGTT 59.048 45.455 0.00 0.00 0.00 2.71
3705 4626 2.092429 ACACACACCACCTCAGAAATGT 60.092 45.455 0.00 0.00 0.00 2.71
3706 4627 2.575532 ACACACACCACCTCAGAAATG 58.424 47.619 0.00 0.00 0.00 2.32
3707 4628 3.214328 GAACACACACCACCTCAGAAAT 58.786 45.455 0.00 0.00 0.00 2.17
3708 4629 2.639065 GAACACACACCACCTCAGAAA 58.361 47.619 0.00 0.00 0.00 2.52
3709 4630 1.134220 GGAACACACACCACCTCAGAA 60.134 52.381 0.00 0.00 0.00 3.02
3710 4631 0.468226 GGAACACACACCACCTCAGA 59.532 55.000 0.00 0.00 0.00 3.27
3711 4632 0.180171 TGGAACACACACCACCTCAG 59.820 55.000 0.00 0.00 0.00 3.35
3712 4633 2.302019 TGGAACACACACCACCTCA 58.698 52.632 0.00 0.00 0.00 3.86
3724 4645 2.317530 TTGATGTGTCACGTGGAACA 57.682 45.000 21.20 21.20 35.74 3.18
3725 4646 2.805671 TCATTGATGTGTCACGTGGAAC 59.194 45.455 17.00 14.50 33.11 3.62
3726 4647 2.805671 GTCATTGATGTGTCACGTGGAA 59.194 45.455 17.00 0.75 33.11 3.53
3727 4648 2.412870 GTCATTGATGTGTCACGTGGA 58.587 47.619 17.00 0.00 33.11 4.02
3728 4649 1.126662 CGTCATTGATGTGTCACGTGG 59.873 52.381 17.00 0.00 33.11 4.94
3729 4650 1.462378 GCGTCATTGATGTGTCACGTG 60.462 52.381 9.94 9.94 33.11 4.49
3730 4651 0.790207 GCGTCATTGATGTGTCACGT 59.210 50.000 7.67 0.00 33.11 4.49
3731 4652 0.246873 CGCGTCATTGATGTGTCACG 60.247 55.000 10.63 0.09 33.11 4.35
3732 4653 0.095245 CCGCGTCATTGATGTGTCAC 59.905 55.000 16.15 0.00 33.11 3.67
3733 4654 0.037790 TCCGCGTCATTGATGTGTCA 60.038 50.000 16.15 2.37 0.00 3.58
3734 4655 0.647410 CTCCGCGTCATTGATGTGTC 59.353 55.000 16.15 0.00 0.00 3.67
3735 4656 0.037326 ACTCCGCGTCATTGATGTGT 60.037 50.000 16.15 4.95 0.00 3.72
3736 4657 0.647410 GACTCCGCGTCATTGATGTG 59.353 55.000 4.92 11.67 42.37 3.21
3737 4658 0.532573 AGACTCCGCGTCATTGATGT 59.467 50.000 4.92 0.00 45.32 3.06
3738 4659 1.203928 GAGACTCCGCGTCATTGATG 58.796 55.000 4.92 1.28 45.32 3.07
3739 4660 0.248661 CGAGACTCCGCGTCATTGAT 60.249 55.000 4.92 0.00 45.32 2.57
3740 4661 1.136774 CGAGACTCCGCGTCATTGA 59.863 57.895 4.92 0.00 45.32 2.57
3741 4662 0.248661 ATCGAGACTCCGCGTCATTG 60.249 55.000 4.92 0.00 45.32 2.82
3742 4663 0.248661 CATCGAGACTCCGCGTCATT 60.249 55.000 4.92 0.00 45.32 2.57
3743 4664 1.356979 CATCGAGACTCCGCGTCAT 59.643 57.895 4.92 0.00 45.32 3.06
3744 4665 2.761195 CCATCGAGACTCCGCGTCA 61.761 63.158 4.92 0.00 45.32 4.35
3745 4666 2.024871 CCATCGAGACTCCGCGTC 59.975 66.667 4.92 0.00 43.17 5.19
3746 4667 4.194720 GCCATCGAGACTCCGCGT 62.195 66.667 4.92 0.00 36.92 6.01
3748 4669 4.194720 ACGCCATCGAGACTCCGC 62.195 66.667 0.00 0.00 39.41 5.54
3749 4670 2.278206 CACGCCATCGAGACTCCG 60.278 66.667 0.00 0.00 39.41 4.63
3750 4671 2.105128 CCACGCCATCGAGACTCC 59.895 66.667 0.00 0.00 39.41 3.85
3751 4672 2.583593 GCCACGCCATCGAGACTC 60.584 66.667 0.00 0.00 39.41 3.36
3752 4673 4.498520 CGCCACGCCATCGAGACT 62.499 66.667 0.00 0.00 39.41 3.24
3766 4687 4.704833 TTGAGACCCTGCTGCGCC 62.705 66.667 4.18 0.00 0.00 6.53
3767 4688 3.426568 GTTGAGACCCTGCTGCGC 61.427 66.667 0.00 0.00 0.00 6.09
3768 4689 3.114616 CGTTGAGACCCTGCTGCG 61.115 66.667 0.00 0.00 0.00 5.18
3769 4690 0.884704 TTTCGTTGAGACCCTGCTGC 60.885 55.000 0.00 0.00 0.00 5.25
3770 4691 1.151668 CTTTCGTTGAGACCCTGCTG 58.848 55.000 0.00 0.00 0.00 4.41
3771 4692 0.759346 ACTTTCGTTGAGACCCTGCT 59.241 50.000 0.00 0.00 0.00 4.24
3772 4693 1.594331 AACTTTCGTTGAGACCCTGC 58.406 50.000 0.00 0.00 30.67 4.85
3782 4703 3.949113 TCCAACCTAAAGCAACTTTCGTT 59.051 39.130 0.00 0.00 35.21 3.85
3783 4704 3.547746 TCCAACCTAAAGCAACTTTCGT 58.452 40.909 0.00 0.00 35.21 3.85
3784 4705 4.215399 TCATCCAACCTAAAGCAACTTTCG 59.785 41.667 0.00 0.00 35.21 3.46
3785 4706 5.703876 CTCATCCAACCTAAAGCAACTTTC 58.296 41.667 0.00 0.00 35.21 2.62
3786 4707 4.021981 GCTCATCCAACCTAAAGCAACTTT 60.022 41.667 0.00 0.00 37.46 2.66
3787 4708 3.507622 GCTCATCCAACCTAAAGCAACTT 59.492 43.478 0.00 0.00 0.00 2.66
3788 4709 3.084786 GCTCATCCAACCTAAAGCAACT 58.915 45.455 0.00 0.00 0.00 3.16
3789 4710 2.819608 TGCTCATCCAACCTAAAGCAAC 59.180 45.455 0.00 0.00 36.86 4.17
3790 4711 3.153369 TGCTCATCCAACCTAAAGCAA 57.847 42.857 0.00 0.00 36.86 3.91
3791 4712 2.877097 TGCTCATCCAACCTAAAGCA 57.123 45.000 0.00 0.00 37.41 3.91
3792 4713 3.817647 CCTATGCTCATCCAACCTAAAGC 59.182 47.826 0.00 0.00 0.00 3.51
3793 4714 4.103153 TCCCTATGCTCATCCAACCTAAAG 59.897 45.833 0.00 0.00 0.00 1.85
3794 4715 4.044308 TCCCTATGCTCATCCAACCTAAA 58.956 43.478 0.00 0.00 0.00 1.85
3795 4716 3.648067 CTCCCTATGCTCATCCAACCTAA 59.352 47.826 0.00 0.00 0.00 2.69
3796 4717 3.242867 CTCCCTATGCTCATCCAACCTA 58.757 50.000 0.00 0.00 0.00 3.08
3797 4718 2.053244 CTCCCTATGCTCATCCAACCT 58.947 52.381 0.00 0.00 0.00 3.50
3798 4719 1.072965 CCTCCCTATGCTCATCCAACC 59.927 57.143 0.00 0.00 0.00 3.77
3799 4720 1.771255 ACCTCCCTATGCTCATCCAAC 59.229 52.381 0.00 0.00 0.00 3.77
3800 4721 1.770658 CACCTCCCTATGCTCATCCAA 59.229 52.381 0.00 0.00 0.00 3.53
3801 4722 1.427809 CACCTCCCTATGCTCATCCA 58.572 55.000 0.00 0.00 0.00 3.41
3802 4723 0.689623 CCACCTCCCTATGCTCATCC 59.310 60.000 0.00 0.00 0.00 3.51
3803 4724 0.036022 GCCACCTCCCTATGCTCATC 59.964 60.000 0.00 0.00 0.00 2.92
3804 4725 1.422161 GGCCACCTCCCTATGCTCAT 61.422 60.000 0.00 0.00 0.00 2.90
3805 4726 2.072487 GGCCACCTCCCTATGCTCA 61.072 63.158 0.00 0.00 0.00 4.26
3806 4727 2.823758 GGGCCACCTCCCTATGCTC 61.824 68.421 4.39 0.00 43.13 4.26
3807 4728 2.774351 GGGCCACCTCCCTATGCT 60.774 66.667 4.39 0.00 43.13 3.79
3813 4734 2.936032 AAGACAGGGCCACCTCCC 60.936 66.667 6.18 0.00 46.95 4.30
3814 4735 2.352805 CAAGACAGGGCCACCTCC 59.647 66.667 6.18 0.00 46.95 4.30
3815 4736 2.360475 GCAAGACAGGGCCACCTC 60.360 66.667 6.18 0.00 46.95 3.85
3816 4737 4.335647 CGCAAGACAGGGCCACCT 62.336 66.667 6.18 0.00 46.55 4.00
3817 4738 4.643387 ACGCAAGACAGGGCCACC 62.643 66.667 6.18 0.00 43.62 4.61
3818 4739 3.050275 GACGCAAGACAGGGCCAC 61.050 66.667 6.18 0.00 43.62 5.01
3819 4740 2.410322 AATGACGCAAGACAGGGCCA 62.410 55.000 6.18 0.00 46.68 5.36
3820 4741 1.675641 AATGACGCAAGACAGGGCC 60.676 57.895 0.00 0.00 46.68 5.80
3821 4742 1.503542 CAATGACGCAAGACAGGGC 59.496 57.895 0.00 0.00 46.68 5.19
3822 4743 1.236616 TGCAATGACGCAAGACAGGG 61.237 55.000 0.00 0.00 46.68 4.45
3823 4744 0.806868 ATGCAATGACGCAAGACAGG 59.193 50.000 0.00 0.00 46.87 4.00
3824 4745 1.528400 CGATGCAATGACGCAAGACAG 60.528 52.381 0.00 0.00 46.87 3.51
3825 4746 0.443478 CGATGCAATGACGCAAGACA 59.557 50.000 0.00 0.00 46.87 3.41
3826 4747 0.443869 ACGATGCAATGACGCAAGAC 59.556 50.000 0.00 0.00 46.87 3.01
3827 4748 1.136000 CAACGATGCAATGACGCAAGA 60.136 47.619 0.00 0.00 46.87 3.02
3828 4749 1.136000 TCAACGATGCAATGACGCAAG 60.136 47.619 0.00 0.00 46.87 4.01
3829 4750 0.871057 TCAACGATGCAATGACGCAA 59.129 45.000 0.00 0.00 46.87 4.85
3831 4752 2.916583 GTCAACGATGCAATGACGC 58.083 52.632 8.80 0.00 34.72 5.19
3833 4754 1.459209 TGACGTCAACGATGCAATGAC 59.541 47.619 17.62 12.59 43.02 3.06
3834 4755 1.726248 CTGACGTCAACGATGCAATGA 59.274 47.619 20.49 0.00 43.02 2.57
3835 4756 1.201954 CCTGACGTCAACGATGCAATG 60.202 52.381 20.49 3.42 43.02 2.82
3836 4757 1.078709 CCTGACGTCAACGATGCAAT 58.921 50.000 20.49 0.00 43.02 3.56
3837 4758 1.565156 GCCTGACGTCAACGATGCAA 61.565 55.000 20.49 0.00 43.02 4.08
3838 4759 2.027073 GCCTGACGTCAACGATGCA 61.027 57.895 20.49 0.00 43.02 3.96
3839 4760 1.291877 AAGCCTGACGTCAACGATGC 61.292 55.000 20.49 15.86 43.02 3.91
3840 4761 0.439985 CAAGCCTGACGTCAACGATG 59.560 55.000 20.49 12.43 43.02 3.84
3841 4762 0.670546 CCAAGCCTGACGTCAACGAT 60.671 55.000 20.49 8.49 43.02 3.73
3842 4763 1.300620 CCAAGCCTGACGTCAACGA 60.301 57.895 20.49 0.00 43.02 3.85
3843 4764 0.878523 TTCCAAGCCTGACGTCAACG 60.879 55.000 20.49 13.40 46.33 4.10
3844 4765 1.264288 CTTTCCAAGCCTGACGTCAAC 59.736 52.381 20.49 14.50 0.00 3.18
3845 4766 1.593196 CTTTCCAAGCCTGACGTCAA 58.407 50.000 20.49 0.00 0.00 3.18
3846 4767 0.250295 CCTTTCCAAGCCTGACGTCA 60.250 55.000 18.88 18.88 0.00 4.35
3847 4768 0.250338 ACCTTTCCAAGCCTGACGTC 60.250 55.000 9.11 9.11 0.00 4.34
3848 4769 0.535102 CACCTTTCCAAGCCTGACGT 60.535 55.000 0.00 0.00 0.00 4.34
3849 4770 0.250295 TCACCTTTCCAAGCCTGACG 60.250 55.000 0.00 0.00 0.00 4.35
3850 4771 1.981256 TTCACCTTTCCAAGCCTGAC 58.019 50.000 0.00 0.00 0.00 3.51
3851 4772 2.517959 CATTCACCTTTCCAAGCCTGA 58.482 47.619 0.00 0.00 0.00 3.86
3852 4773 1.067354 GCATTCACCTTTCCAAGCCTG 60.067 52.381 0.00 0.00 0.00 4.85
3853 4774 1.260544 GCATTCACCTTTCCAAGCCT 58.739 50.000 0.00 0.00 0.00 4.58
3854 4775 0.109132 CGCATTCACCTTTCCAAGCC 60.109 55.000 0.00 0.00 0.00 4.35
3855 4776 0.598065 ACGCATTCACCTTTCCAAGC 59.402 50.000 0.00 0.00 0.00 4.01
3856 4777 3.369546 AAACGCATTCACCTTTCCAAG 57.630 42.857 0.00 0.00 0.00 3.61
3857 4778 3.810310 AAAACGCATTCACCTTTCCAA 57.190 38.095 0.00 0.00 0.00 3.53
3858 4779 3.304123 CGTAAAACGCATTCACCTTTCCA 60.304 43.478 0.00 0.00 33.65 3.53
3859 4780 3.231160 CGTAAAACGCATTCACCTTTCC 58.769 45.455 0.00 0.00 33.65 3.13
3860 4781 3.231160 CCGTAAAACGCATTCACCTTTC 58.769 45.455 0.00 0.00 40.91 2.62
3861 4782 2.619646 ACCGTAAAACGCATTCACCTTT 59.380 40.909 0.00 0.00 40.91 3.11
3862 4783 2.031508 CACCGTAAAACGCATTCACCTT 60.032 45.455 0.00 0.00 40.91 3.50
3863 4784 1.533731 CACCGTAAAACGCATTCACCT 59.466 47.619 0.00 0.00 40.91 4.00
3864 4785 1.264826 ACACCGTAAAACGCATTCACC 59.735 47.619 0.00 0.00 40.91 4.02
3865 4786 2.567067 GACACCGTAAAACGCATTCAC 58.433 47.619 0.00 0.00 40.91 3.18
3866 4787 1.532007 GGACACCGTAAAACGCATTCA 59.468 47.619 0.00 0.00 40.91 2.57
3867 4788 1.802365 AGGACACCGTAAAACGCATTC 59.198 47.619 0.00 0.00 40.91 2.67
3868 4789 1.533731 CAGGACACCGTAAAACGCATT 59.466 47.619 0.00 0.00 40.91 3.56
3869 4790 1.153353 CAGGACACCGTAAAACGCAT 58.847 50.000 0.00 0.00 40.91 4.73
3870 4791 0.881159 CCAGGACACCGTAAAACGCA 60.881 55.000 0.00 0.00 40.91 5.24
3871 4792 0.600782 TCCAGGACACCGTAAAACGC 60.601 55.000 0.00 0.00 40.91 4.84
3872 4793 1.142474 GTCCAGGACACCGTAAAACG 58.858 55.000 15.43 0.00 35.42 3.60
3873 4794 2.538512 AGTCCAGGACACCGTAAAAC 57.461 50.000 22.31 0.00 34.60 2.43
3874 4795 3.947910 CTAGTCCAGGACACCGTAAAA 57.052 47.619 22.31 0.00 34.60 1.52
4012 4933 3.454082 GGAGGAGTCCTTGTCTTGATCAT 59.546 47.826 14.41 0.00 40.17 2.45
4075 4997 5.305585 CCTCGGTTTATATAATGCACCAGT 58.694 41.667 13.00 0.00 0.00 4.00
4116 5038 7.201821 GCTAGCCTATGGTATGATTGTTGTTTT 60.202 37.037 2.29 0.00 0.00 2.43
4215 5139 4.966805 TGAAGGTAATACCCTACTTCCTGG 59.033 45.833 5.71 0.00 39.75 4.45
4241 5165 2.294078 CCCAGGTTCGAGCCCTCTT 61.294 63.158 15.45 0.00 0.00 2.85
4249 5173 3.142951 CACAATGTTTACCCAGGTTCGA 58.857 45.455 0.00 0.00 0.00 3.71
4320 5245 3.221389 CCGGCGGATCTCGGGTAA 61.221 66.667 24.41 0.00 42.32 2.85
4416 5342 1.153745 GAAGCCGATGTCGCAGTCT 60.154 57.895 0.00 0.00 38.18 3.24
4446 5372 2.429930 CCAAGGTGACCAGCCGAA 59.570 61.111 3.63 0.00 0.00 4.30
4480 5406 2.158310 ACATGATGATCGGAGGTAGGGA 60.158 50.000 0.00 0.00 0.00 4.20
4495 5421 0.109342 GGCCCTCATCCGAACATGAT 59.891 55.000 0.00 0.00 32.21 2.45


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.