Multiple sequence alignment - TraesCS4D01G007000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4D01G007000 chr4D 100.000 4158 0 0 1 4158 3595105 3599262 0.000000e+00 7679.0
1 TraesCS4D01G007000 chr4D 92.638 163 6 1 1114 1276 3596164 3596320 3.230000e-56 230.0
2 TraesCS4D01G007000 chr4D 92.638 163 6 1 1060 1216 3596218 3596380 3.230000e-56 230.0
3 TraesCS4D01G007000 chr4D 85.165 182 27 0 2803 2984 3597477 3597658 1.970000e-43 187.0
4 TraesCS4D01G007000 chr4D 85.165 182 27 0 2373 2554 3597907 3598088 1.970000e-43 187.0
5 TraesCS4D01G007000 chr4D 88.991 109 6 1 1168 1276 3596164 3596266 3.370000e-26 130.0
6 TraesCS4D01G007000 chr4D 88.991 109 6 1 1060 1162 3596272 3596380 3.370000e-26 130.0
7 TraesCS4D01G007000 chr4D 94.444 36 2 0 3888 3923 443514905 443514940 5.810000e-04 56.5
8 TraesCS4D01G007000 chr4B 90.252 1508 91 17 2369 3865 5459271 5457809 0.000000e+00 1919.0
9 TraesCS4D01G007000 chr4B 84.705 1118 96 38 528 1602 5460994 5459909 0.000000e+00 1048.0
10 TraesCS4D01G007000 chr4B 95.195 333 16 0 3826 4158 5457806 5457474 1.020000e-145 527.0
11 TraesCS4D01G007000 chr4B 94.444 234 8 2 1902 2135 5459718 5459490 5.110000e-94 355.0
12 TraesCS4D01G007000 chr4B 83.476 351 52 3 1865 2214 106831904 106832249 5.190000e-84 322.0
13 TraesCS4D01G007000 chr4B 85.047 214 12 11 1028 1234 5460427 5460227 2.540000e-47 200.0
14 TraesCS4D01G007000 chr4B 88.811 143 10 2 1054 1196 5460347 5460211 1.990000e-38 171.0
15 TraesCS4D01G007000 chr4B 83.140 172 14 6 1114 1276 5460461 5460296 4.330000e-30 143.0
16 TraesCS4D01G007000 chr4B 97.500 80 2 0 698 777 9357822 9357901 2.020000e-28 137.0
17 TraesCS4D01G007000 chr4B 91.579 95 4 3 706 800 139133763 139133853 1.210000e-25 128.0
18 TraesCS4D01G007000 chr4B 89.109 101 8 1 1168 1265 5460461 5460361 5.640000e-24 122.0
19 TraesCS4D01G007000 chr4B 87.654 81 7 1 1062 1142 5460288 5460211 1.590000e-14 91.6
20 TraesCS4D01G007000 chr4A 90.100 1495 91 21 2369 3856 601043189 601041745 0.000000e+00 1888.0
21 TraesCS4D01G007000 chr4A 87.576 990 72 23 1170 2140 601044486 601043529 0.000000e+00 1099.0
22 TraesCS4D01G007000 chr4A 83.846 650 52 28 570 1185 601044984 601044354 1.680000e-158 569.0
23 TraesCS4D01G007000 chr4A 89.344 244 16 4 2143 2376 601043452 601043209 8.740000e-77 298.0
24 TraesCS4D01G007000 chr4A 94.444 36 2 0 3888 3923 590226023 590226058 5.810000e-04 56.5
25 TraesCS4D01G007000 chr4A 92.105 38 2 1 3878 3915 36410459 36410423 8.000000e-03 52.8
26 TraesCS4D01G007000 chr4A 100.000 28 0 0 3888 3915 608607662 608607689 8.000000e-03 52.8
27 TraesCS4D01G007000 chr7B 93.822 259 16 0 1874 2132 686192049 686192307 1.400000e-104 390.0
28 TraesCS4D01G007000 chr7B 84.375 256 23 11 1214 1455 686179343 686179595 6.950000e-58 235.0
29 TraesCS4D01G007000 chr5B 94.048 252 15 0 1881 2132 40085592 40085341 2.350000e-102 383.0
30 TraesCS4D01G007000 chr5B 87.171 304 38 1 1299 1602 40086045 40085743 1.110000e-90 344.0
31 TraesCS4D01G007000 chr5B 83.286 353 51 4 1865 2214 498290629 498290976 6.710000e-83 318.0
32 TraesCS4D01G007000 chr5B 98.750 80 0 1 704 782 550214584 550214505 1.560000e-29 141.0
33 TraesCS4D01G007000 chr5B 91.803 61 5 0 1449 1509 396488095 396488035 7.410000e-13 86.1
34 TraesCS4D01G007000 chr5B 90.698 43 4 0 3888 3930 376328280 376328322 1.610000e-04 58.4
35 TraesCS4D01G007000 chr5B 94.118 34 2 0 3888 3921 706306907 706306874 8.000000e-03 52.8
36 TraesCS4D01G007000 chr6A 83.476 351 52 3 1865 2214 12337010 12337355 5.190000e-84 322.0
37 TraesCS4D01G007000 chr3A 78.320 512 84 15 1865 2369 708377705 708378196 5.220000e-79 305.0
38 TraesCS4D01G007000 chr3A 91.803 61 5 0 1449 1509 265255157 265255097 7.410000e-13 86.1
39 TraesCS4D01G007000 chr3A 92.105 38 3 0 3888 3925 31665128 31665091 2.000000e-03 54.7
40 TraesCS4D01G007000 chr2D 88.210 229 24 3 1947 2173 584831928 584832155 1.910000e-68 270.0
41 TraesCS4D01G007000 chr6B 86.567 134 16 2 366 499 388287094 388287225 3.350000e-31 147.0
42 TraesCS4D01G007000 chr6B 90.625 96 7 1 704 799 40674778 40674871 4.360000e-25 126.0
43 TraesCS4D01G007000 chr5D 98.750 80 0 1 704 782 450201558 450201479 1.560000e-29 141.0
44 TraesCS4D01G007000 chr5D 96.875 32 1 0 3888 3919 408787905 408787936 2.000000e-03 54.7
45 TraesCS4D01G007000 chr5A 98.750 80 0 1 704 782 569525421 569525342 1.560000e-29 141.0
46 TraesCS4D01G007000 chr5A 96.471 85 1 2 699 782 326659603 326659686 5.610000e-29 139.0
47 TraesCS4D01G007000 chr6D 98.462 65 1 0 1317 1381 389639554 389639490 9.450000e-22 115.0
48 TraesCS4D01G007000 chr6D 91.429 70 6 0 1440 1509 389639494 389639425 3.420000e-16 97.1
49 TraesCS4D01G007000 chr3B 85.057 87 11 2 3623 3708 42917335 42917250 2.060000e-13 87.9
50 TraesCS4D01G007000 chr2A 94.000 50 3 0 4069 4118 312039179 312039228 4.460000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4D01G007000 chr4D 3595105 3599262 4157 False 1253.285714 7679 90.512571 1 4158 7 chr4D.!!$F2 4157
1 TraesCS4D01G007000 chr4B 5457474 5460994 3520 True 508.511111 1919 88.706333 528 4158 9 chr4B.!!$R1 3630
2 TraesCS4D01G007000 chr4A 601041745 601044984 3239 True 963.500000 1888 87.716500 570 3856 4 chr4A.!!$R2 3286
3 TraesCS4D01G007000 chr5B 40085341 40086045 704 True 363.500000 383 90.609500 1299 2132 2 chr5B.!!$R4 833

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
331 332 0.028770 CGACACAAACCAACGCATGT 59.971 50.0 0.0 0.0 0.00 3.21 F
432 433 0.036010 AAAGCCTCACGACCTGATGG 60.036 55.0 0.0 0.0 39.83 3.51 F
477 478 0.165944 CGACATTCCACCGCTTGTTC 59.834 55.0 0.0 0.0 0.00 3.18 F
483 484 0.250295 TCCACCGCTTGTTCTCTTGG 60.250 55.0 0.0 0.0 0.00 3.61 F
658 659 0.395312 GGGAGAAAGGTGTTCCGTCA 59.605 55.0 0.0 0.0 39.05 4.35 F
1870 1980 0.399091 CTGACATAGGGCTGAGGGGA 60.399 60.0 0.0 0.0 0.00 4.81 F
1871 1981 0.399091 TGACATAGGGCTGAGGGGAG 60.399 60.0 0.0 0.0 0.00 4.30 F
2520 2756 0.620556 TTCCACCATCCTCTGCCTTC 59.379 55.0 0.0 0.0 0.00 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1278 1371 0.316204 CAGCCTTGTCTTTGCCCTTG 59.684 55.000 0.00 0.00 0.00 3.61 R
1851 1961 0.399091 TCCCCTCAGCCCTATGTCAG 60.399 60.000 0.00 0.00 0.00 3.51 R
1852 1962 0.399091 CTCCCCTCAGCCCTATGTCA 60.399 60.000 0.00 0.00 0.00 3.58 R
2454 2690 1.407979 CCAGATGCAGAAAGGATTGGC 59.592 52.381 0.00 0.00 0.00 4.52 R
2580 2817 0.035725 TGATGGGCACAGCTGAAGAG 60.036 55.000 23.35 8.25 33.23 2.85 R
2994 3233 1.070445 CAGAAACAGGGCAAAATGGCA 59.930 47.619 6.25 0.00 45.76 4.92 R
3049 3288 1.251251 GTTTCTTGCCTGATGCTGGT 58.749 50.000 0.00 0.00 42.00 4.00 R
3888 4175 3.555956 CCTCCGATCCAAAATAAGTGTCG 59.444 47.826 0.00 0.00 0.00 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.672983 ATACTTTTCGATGTGATGAGTGTTT 57.327 32.000 0.00 0.00 0.00 2.83
25 26 5.990408 ACTTTTCGATGTGATGAGTGTTTC 58.010 37.500 0.00 0.00 0.00 2.78
26 27 5.760253 ACTTTTCGATGTGATGAGTGTTTCT 59.240 36.000 0.00 0.00 0.00 2.52
27 28 5.845985 TTTCGATGTGATGAGTGTTTCTC 57.154 39.130 0.00 0.00 43.03 2.87
28 29 4.790765 TCGATGTGATGAGTGTTTCTCT 57.209 40.909 0.00 0.00 43.13 3.10
29 30 5.897377 TCGATGTGATGAGTGTTTCTCTA 57.103 39.130 0.00 0.00 43.13 2.43
30 31 6.267496 TCGATGTGATGAGTGTTTCTCTAA 57.733 37.500 0.00 0.00 43.13 2.10
31 32 6.687604 TCGATGTGATGAGTGTTTCTCTAAA 58.312 36.000 0.00 0.00 43.13 1.85
32 33 6.808704 TCGATGTGATGAGTGTTTCTCTAAAG 59.191 38.462 0.00 0.00 43.13 1.85
33 34 6.035435 CGATGTGATGAGTGTTTCTCTAAAGG 59.965 42.308 0.00 0.00 43.13 3.11
34 35 6.174720 TGTGATGAGTGTTTCTCTAAAGGT 57.825 37.500 0.00 0.00 43.13 3.50
35 36 6.591935 TGTGATGAGTGTTTCTCTAAAGGTT 58.408 36.000 0.00 0.00 43.13 3.50
36 37 7.054124 TGTGATGAGTGTTTCTCTAAAGGTTT 58.946 34.615 0.00 0.00 43.13 3.27
37 38 7.012327 TGTGATGAGTGTTTCTCTAAAGGTTTG 59.988 37.037 0.00 0.00 43.13 2.93
38 39 6.486657 TGATGAGTGTTTCTCTAAAGGTTTGG 59.513 38.462 0.00 0.00 43.13 3.28
39 40 5.130350 TGAGTGTTTCTCTAAAGGTTTGGG 58.870 41.667 0.00 0.00 43.13 4.12
40 41 5.125367 AGTGTTTCTCTAAAGGTTTGGGT 57.875 39.130 0.00 0.00 0.00 4.51
41 42 5.516044 AGTGTTTCTCTAAAGGTTTGGGTT 58.484 37.500 0.00 0.00 0.00 4.11
42 43 5.359860 AGTGTTTCTCTAAAGGTTTGGGTTG 59.640 40.000 0.00 0.00 0.00 3.77
43 44 4.647399 TGTTTCTCTAAAGGTTTGGGTTGG 59.353 41.667 0.00 0.00 0.00 3.77
44 45 3.518992 TCTCTAAAGGTTTGGGTTGGG 57.481 47.619 0.00 0.00 0.00 4.12
45 46 2.787035 TCTCTAAAGGTTTGGGTTGGGT 59.213 45.455 0.00 0.00 0.00 4.51
46 47 3.205733 TCTCTAAAGGTTTGGGTTGGGTT 59.794 43.478 0.00 0.00 0.00 4.11
47 48 3.964688 CTCTAAAGGTTTGGGTTGGGTTT 59.035 43.478 0.00 0.00 0.00 3.27
48 49 4.363573 TCTAAAGGTTTGGGTTGGGTTTT 58.636 39.130 0.00 0.00 0.00 2.43
49 50 3.637911 AAAGGTTTGGGTTGGGTTTTC 57.362 42.857 0.00 0.00 0.00 2.29
50 51 2.561209 AGGTTTGGGTTGGGTTTTCT 57.439 45.000 0.00 0.00 0.00 2.52
51 52 3.691698 AGGTTTGGGTTGGGTTTTCTA 57.308 42.857 0.00 0.00 0.00 2.10
52 53 3.572642 AGGTTTGGGTTGGGTTTTCTAG 58.427 45.455 0.00 0.00 0.00 2.43
53 54 3.205733 AGGTTTGGGTTGGGTTTTCTAGA 59.794 43.478 0.00 0.00 0.00 2.43
54 55 4.140782 AGGTTTGGGTTGGGTTTTCTAGAT 60.141 41.667 0.00 0.00 0.00 1.98
55 56 4.591498 GGTTTGGGTTGGGTTTTCTAGATT 59.409 41.667 0.00 0.00 0.00 2.40
56 57 5.510690 GGTTTGGGTTGGGTTTTCTAGATTG 60.511 44.000 0.00 0.00 0.00 2.67
57 58 4.463050 TGGGTTGGGTTTTCTAGATTGT 57.537 40.909 0.00 0.00 0.00 2.71
58 59 4.148838 TGGGTTGGGTTTTCTAGATTGTG 58.851 43.478 0.00 0.00 0.00 3.33
59 60 3.509967 GGGTTGGGTTTTCTAGATTGTGG 59.490 47.826 0.00 0.00 0.00 4.17
60 61 3.056821 GGTTGGGTTTTCTAGATTGTGGC 60.057 47.826 0.00 0.00 0.00 5.01
61 62 2.432444 TGGGTTTTCTAGATTGTGGCG 58.568 47.619 0.00 0.00 0.00 5.69
62 63 2.224670 TGGGTTTTCTAGATTGTGGCGT 60.225 45.455 0.00 0.00 0.00 5.68
63 64 2.161609 GGGTTTTCTAGATTGTGGCGTG 59.838 50.000 0.00 0.00 0.00 5.34
64 65 3.071479 GGTTTTCTAGATTGTGGCGTGA 58.929 45.455 0.00 0.00 0.00 4.35
65 66 3.689649 GGTTTTCTAGATTGTGGCGTGAT 59.310 43.478 0.00 0.00 0.00 3.06
66 67 4.437390 GGTTTTCTAGATTGTGGCGTGATG 60.437 45.833 0.00 0.00 0.00 3.07
67 68 3.610040 TTCTAGATTGTGGCGTGATGT 57.390 42.857 0.00 0.00 0.00 3.06
68 69 2.892374 TCTAGATTGTGGCGTGATGTG 58.108 47.619 0.00 0.00 0.00 3.21
69 70 2.233676 TCTAGATTGTGGCGTGATGTGT 59.766 45.455 0.00 0.00 0.00 3.72
70 71 1.896220 AGATTGTGGCGTGATGTGTT 58.104 45.000 0.00 0.00 0.00 3.32
71 72 2.229792 AGATTGTGGCGTGATGTGTTT 58.770 42.857 0.00 0.00 0.00 2.83
72 73 2.622942 AGATTGTGGCGTGATGTGTTTT 59.377 40.909 0.00 0.00 0.00 2.43
73 74 3.818210 AGATTGTGGCGTGATGTGTTTTA 59.182 39.130 0.00 0.00 0.00 1.52
74 75 4.458989 AGATTGTGGCGTGATGTGTTTTAT 59.541 37.500 0.00 0.00 0.00 1.40
75 76 4.576216 TTGTGGCGTGATGTGTTTTATT 57.424 36.364 0.00 0.00 0.00 1.40
76 77 4.576216 TGTGGCGTGATGTGTTTTATTT 57.424 36.364 0.00 0.00 0.00 1.40
77 78 4.938080 TGTGGCGTGATGTGTTTTATTTT 58.062 34.783 0.00 0.00 0.00 1.82
78 79 6.073327 TGTGGCGTGATGTGTTTTATTTTA 57.927 33.333 0.00 0.00 0.00 1.52
79 80 5.915758 TGTGGCGTGATGTGTTTTATTTTAC 59.084 36.000 0.00 0.00 0.00 2.01
80 81 5.915758 GTGGCGTGATGTGTTTTATTTTACA 59.084 36.000 0.00 0.00 0.00 2.41
81 82 6.418226 GTGGCGTGATGTGTTTTATTTTACAA 59.582 34.615 0.00 0.00 0.00 2.41
82 83 7.115663 GTGGCGTGATGTGTTTTATTTTACAAT 59.884 33.333 0.00 0.00 0.00 2.71
83 84 7.115520 TGGCGTGATGTGTTTTATTTTACAATG 59.884 33.333 0.00 0.00 0.00 2.82
84 85 7.115663 GGCGTGATGTGTTTTATTTTACAATGT 59.884 33.333 0.00 0.00 0.00 2.71
85 86 9.119329 GCGTGATGTGTTTTATTTTACAATGTA 57.881 29.630 0.00 0.00 0.00 2.29
113 114 8.730680 TGTGAAGAATTAGAAATGAAAGTAGGC 58.269 33.333 0.00 0.00 0.00 3.93
114 115 8.730680 GTGAAGAATTAGAAATGAAAGTAGGCA 58.269 33.333 0.00 0.00 0.00 4.75
115 116 9.295825 TGAAGAATTAGAAATGAAAGTAGGCAA 57.704 29.630 0.00 0.00 0.00 4.52
118 119 8.246871 AGAATTAGAAATGAAAGTAGGCAAAGC 58.753 33.333 0.00 0.00 0.00 3.51
119 120 6.892658 TTAGAAATGAAAGTAGGCAAAGCA 57.107 33.333 0.00 0.00 0.00 3.91
120 121 5.382618 AGAAATGAAAGTAGGCAAAGCAG 57.617 39.130 0.00 0.00 0.00 4.24
121 122 4.219288 AGAAATGAAAGTAGGCAAAGCAGG 59.781 41.667 0.00 0.00 0.00 4.85
122 123 2.656947 TGAAAGTAGGCAAAGCAGGT 57.343 45.000 0.00 0.00 0.00 4.00
123 124 2.944129 TGAAAGTAGGCAAAGCAGGTT 58.056 42.857 0.00 0.00 0.00 3.50
124 125 4.093472 TGAAAGTAGGCAAAGCAGGTTA 57.907 40.909 0.00 0.00 0.00 2.85
125 126 4.465886 TGAAAGTAGGCAAAGCAGGTTAA 58.534 39.130 0.00 0.00 0.00 2.01
126 127 4.890581 TGAAAGTAGGCAAAGCAGGTTAAA 59.109 37.500 0.00 0.00 0.00 1.52
127 128 4.848562 AAGTAGGCAAAGCAGGTTAAAC 57.151 40.909 0.00 0.00 0.00 2.01
128 129 3.827722 AGTAGGCAAAGCAGGTTAAACA 58.172 40.909 0.00 0.00 0.00 2.83
129 130 4.211920 AGTAGGCAAAGCAGGTTAAACAA 58.788 39.130 0.00 0.00 0.00 2.83
130 131 4.647399 AGTAGGCAAAGCAGGTTAAACAAA 59.353 37.500 0.00 0.00 0.00 2.83
131 132 4.479786 AGGCAAAGCAGGTTAAACAAAA 57.520 36.364 0.00 0.00 0.00 2.44
132 133 4.837972 AGGCAAAGCAGGTTAAACAAAAA 58.162 34.783 0.00 0.00 0.00 1.94
133 134 4.634004 AGGCAAAGCAGGTTAAACAAAAAC 59.366 37.500 0.00 0.00 0.00 2.43
134 135 4.634004 GGCAAAGCAGGTTAAACAAAAACT 59.366 37.500 0.00 0.00 0.00 2.66
135 136 5.813157 GGCAAAGCAGGTTAAACAAAAACTA 59.187 36.000 0.00 0.00 0.00 2.24
136 137 6.314152 GGCAAAGCAGGTTAAACAAAAACTAA 59.686 34.615 0.00 0.00 0.00 2.24
137 138 7.148390 GGCAAAGCAGGTTAAACAAAAACTAAA 60.148 33.333 0.00 0.00 0.00 1.85
138 139 8.231161 GCAAAGCAGGTTAAACAAAAACTAAAA 58.769 29.630 0.00 0.00 0.00 1.52
142 143 9.758651 AGCAGGTTAAACAAAAACTAAAATAGG 57.241 29.630 0.00 0.00 0.00 2.57
143 144 9.752961 GCAGGTTAAACAAAAACTAAAATAGGA 57.247 29.630 0.00 0.00 0.00 2.94
166 167 8.376270 AGGATATAGAGGCTAATTGTTGTTACC 58.624 37.037 0.00 0.00 0.00 2.85
167 168 7.331193 GGATATAGAGGCTAATTGTTGTTACCG 59.669 40.741 0.00 0.00 0.00 4.02
168 169 3.007635 AGAGGCTAATTGTTGTTACCGC 58.992 45.455 0.00 0.00 0.00 5.68
169 170 2.745281 GAGGCTAATTGTTGTTACCGCA 59.255 45.455 0.00 0.00 0.00 5.69
170 171 3.150767 AGGCTAATTGTTGTTACCGCAA 58.849 40.909 0.00 0.00 0.00 4.85
171 172 3.761752 AGGCTAATTGTTGTTACCGCAAT 59.238 39.130 0.00 0.00 34.69 3.56
172 173 3.857093 GGCTAATTGTTGTTACCGCAATG 59.143 43.478 3.14 0.00 33.68 2.82
173 174 4.380023 GGCTAATTGTTGTTACCGCAATGA 60.380 41.667 3.14 0.00 33.68 2.57
174 175 5.157781 GCTAATTGTTGTTACCGCAATGAA 58.842 37.500 3.14 0.00 33.68 2.57
175 176 5.631512 GCTAATTGTTGTTACCGCAATGAAA 59.368 36.000 3.14 0.00 33.68 2.69
176 177 6.144724 GCTAATTGTTGTTACCGCAATGAAAA 59.855 34.615 3.14 0.00 33.68 2.29
177 178 6.910536 AATTGTTGTTACCGCAATGAAAAA 57.089 29.167 3.14 0.00 33.68 1.94
206 207 9.750125 AATAAAAACTCACCAACAATCTTCTTC 57.250 29.630 0.00 0.00 0.00 2.87
207 208 7.410120 AAAAACTCACCAACAATCTTCTTCT 57.590 32.000 0.00 0.00 0.00 2.85
208 209 7.410120 AAAACTCACCAACAATCTTCTTCTT 57.590 32.000 0.00 0.00 0.00 2.52
209 210 7.410120 AAACTCACCAACAATCTTCTTCTTT 57.590 32.000 0.00 0.00 0.00 2.52
210 211 6.625873 ACTCACCAACAATCTTCTTCTTTC 57.374 37.500 0.00 0.00 0.00 2.62
211 212 5.532779 ACTCACCAACAATCTTCTTCTTTCC 59.467 40.000 0.00 0.00 0.00 3.13
212 213 4.515191 TCACCAACAATCTTCTTCTTTCCG 59.485 41.667 0.00 0.00 0.00 4.30
213 214 3.253432 ACCAACAATCTTCTTCTTTCCGC 59.747 43.478 0.00 0.00 0.00 5.54
214 215 3.366374 CCAACAATCTTCTTCTTTCCGCC 60.366 47.826 0.00 0.00 0.00 6.13
215 216 2.437413 ACAATCTTCTTCTTTCCGCCC 58.563 47.619 0.00 0.00 0.00 6.13
216 217 2.224769 ACAATCTTCTTCTTTCCGCCCA 60.225 45.455 0.00 0.00 0.00 5.36
217 218 2.409948 ATCTTCTTCTTTCCGCCCAG 57.590 50.000 0.00 0.00 0.00 4.45
218 219 1.348064 TCTTCTTCTTTCCGCCCAGA 58.652 50.000 0.00 0.00 0.00 3.86
219 220 1.276421 TCTTCTTCTTTCCGCCCAGAG 59.724 52.381 0.00 0.00 0.00 3.35
220 221 0.324943 TTCTTCTTTCCGCCCAGAGG 59.675 55.000 0.00 0.00 0.00 3.69
221 222 0.544357 TCTTCTTTCCGCCCAGAGGA 60.544 55.000 0.00 0.00 35.69 3.71
222 223 0.324943 CTTCTTTCCGCCCAGAGGAA 59.675 55.000 0.00 0.00 45.19 3.36
225 226 2.345991 TTCCGCCCAGAGGAAACG 59.654 61.111 0.00 0.00 44.04 3.60
226 227 2.211410 TTCCGCCCAGAGGAAACGA 61.211 57.895 0.00 0.00 44.04 3.85
227 228 1.760479 TTCCGCCCAGAGGAAACGAA 61.760 55.000 0.00 0.00 44.04 3.85
228 229 1.078426 CCGCCCAGAGGAAACGAAT 60.078 57.895 0.00 0.00 33.47 3.34
229 230 1.369091 CCGCCCAGAGGAAACGAATG 61.369 60.000 0.00 0.00 33.47 2.67
230 231 1.803289 GCCCAGAGGAAACGAATGC 59.197 57.895 0.00 0.00 33.47 3.56
231 232 1.657751 GCCCAGAGGAAACGAATGCC 61.658 60.000 0.00 0.00 33.47 4.40
232 233 1.369091 CCCAGAGGAAACGAATGCCG 61.369 60.000 0.00 0.00 39.04 5.69
233 234 1.369091 CCAGAGGAAACGAATGCCGG 61.369 60.000 0.00 0.00 43.93 6.13
234 235 1.745489 AGAGGAAACGAATGCCGGC 60.745 57.895 22.73 22.73 43.93 6.13
235 236 2.750237 AGGAAACGAATGCCGGCC 60.750 61.111 26.77 7.69 43.93 6.13
236 237 2.750237 GGAAACGAATGCCGGCCT 60.750 61.111 26.77 12.40 43.93 5.19
237 238 2.340328 GGAAACGAATGCCGGCCTT 61.340 57.895 26.77 21.94 43.93 4.35
238 239 1.136774 GAAACGAATGCCGGCCTTC 59.863 57.895 28.54 28.54 43.93 3.46
239 240 1.582610 GAAACGAATGCCGGCCTTCA 61.583 55.000 34.09 15.39 43.93 3.02
240 241 1.862602 AAACGAATGCCGGCCTTCAC 61.863 55.000 34.09 16.64 43.93 3.18
241 242 3.508840 CGAATGCCGGCCTTCACC 61.509 66.667 34.09 16.01 33.91 4.02
242 243 3.140814 GAATGCCGGCCTTCACCC 61.141 66.667 31.86 11.58 0.00 4.61
243 244 4.759205 AATGCCGGCCTTCACCCC 62.759 66.667 26.77 0.00 0.00 4.95
249 250 4.410400 GGCCTTCACCCCACCGAG 62.410 72.222 0.00 0.00 0.00 4.63
250 251 3.319198 GCCTTCACCCCACCGAGA 61.319 66.667 0.00 0.00 0.00 4.04
251 252 2.890766 GCCTTCACCCCACCGAGAA 61.891 63.158 0.00 0.00 0.00 2.87
252 253 1.758592 CCTTCACCCCACCGAGAAA 59.241 57.895 0.00 0.00 0.00 2.52
253 254 0.109723 CCTTCACCCCACCGAGAAAA 59.890 55.000 0.00 0.00 0.00 2.29
254 255 1.477923 CCTTCACCCCACCGAGAAAAA 60.478 52.381 0.00 0.00 0.00 1.94
272 273 4.813296 AAAAACTCTTCTCGCGTTGAAT 57.187 36.364 5.77 0.00 0.00 2.57
273 274 4.813296 AAAACTCTTCTCGCGTTGAATT 57.187 36.364 5.77 1.48 0.00 2.17
274 275 3.795561 AACTCTTCTCGCGTTGAATTG 57.204 42.857 5.77 9.90 0.00 2.32
275 276 2.069273 ACTCTTCTCGCGTTGAATTGG 58.931 47.619 5.77 7.73 0.00 3.16
276 277 1.394917 CTCTTCTCGCGTTGAATTGGG 59.605 52.381 5.77 1.12 0.00 4.12
277 278 0.447801 CTTCTCGCGTTGAATTGGGG 59.552 55.000 5.77 0.00 0.00 4.96
278 279 1.582610 TTCTCGCGTTGAATTGGGGC 61.583 55.000 5.77 0.00 0.00 5.80
281 282 2.958576 GCGTTGAATTGGGGCGAA 59.041 55.556 0.00 0.00 0.00 4.70
282 283 1.287503 GCGTTGAATTGGGGCGAAA 59.712 52.632 0.00 0.00 0.00 3.46
283 284 0.732538 GCGTTGAATTGGGGCGAAAG 60.733 55.000 0.00 0.00 0.00 2.62
284 285 0.109319 CGTTGAATTGGGGCGAAAGG 60.109 55.000 0.00 0.00 0.00 3.11
299 300 4.159099 AGGCTGGCCTTGATCTCA 57.841 55.556 8.50 0.00 45.70 3.27
300 301 2.630297 AGGCTGGCCTTGATCTCAT 58.370 52.632 8.50 0.00 45.70 2.90
301 302 0.183014 AGGCTGGCCTTGATCTCATG 59.817 55.000 8.50 0.00 45.70 3.07
302 303 0.822532 GGCTGGCCTTGATCTCATGG 60.823 60.000 3.32 7.56 42.28 3.66
303 304 0.182061 GCTGGCCTTGATCTCATGGA 59.818 55.000 14.48 0.00 42.04 3.41
304 305 1.964552 CTGGCCTTGATCTCATGGAC 58.035 55.000 14.48 12.45 46.34 4.02
305 306 0.548031 TGGCCTTGATCTCATGGACC 59.452 55.000 13.74 13.73 45.77 4.46
306 307 0.842635 GGCCTTGATCTCATGGACCT 59.157 55.000 14.48 0.00 41.86 3.85
307 308 1.202746 GGCCTTGATCTCATGGACCTC 60.203 57.143 14.48 0.00 41.86 3.85
308 309 1.202746 GCCTTGATCTCATGGACCTCC 60.203 57.143 14.48 0.00 42.04 4.30
309 310 1.069823 CCTTGATCTCATGGACCTCCG 59.930 57.143 6.31 0.00 42.04 4.63
310 311 2.034878 CTTGATCTCATGGACCTCCGA 58.965 52.381 0.00 0.00 39.43 4.55
311 312 1.403814 TGATCTCATGGACCTCCGAC 58.596 55.000 0.00 0.00 39.43 4.79
312 313 0.676736 GATCTCATGGACCTCCGACC 59.323 60.000 0.00 0.00 39.43 4.79
313 314 1.109920 ATCTCATGGACCTCCGACCG 61.110 60.000 0.00 0.00 39.43 4.79
314 315 1.753078 CTCATGGACCTCCGACCGA 60.753 63.158 0.00 0.00 39.43 4.69
315 316 2.005960 CTCATGGACCTCCGACCGAC 62.006 65.000 0.00 0.00 39.43 4.79
316 317 2.036731 ATGGACCTCCGACCGACA 59.963 61.111 0.00 0.00 39.43 4.35
317 318 2.348888 ATGGACCTCCGACCGACAC 61.349 63.158 0.00 0.00 39.43 3.67
318 319 2.987547 GGACCTCCGACCGACACA 60.988 66.667 0.00 0.00 0.00 3.72
319 320 2.567497 GGACCTCCGACCGACACAA 61.567 63.158 0.00 0.00 0.00 3.33
320 321 1.364901 GACCTCCGACCGACACAAA 59.635 57.895 0.00 0.00 0.00 2.83
321 322 0.942884 GACCTCCGACCGACACAAAC 60.943 60.000 0.00 0.00 0.00 2.93
322 323 1.666872 CCTCCGACCGACACAAACC 60.667 63.158 0.00 0.00 0.00 3.27
323 324 1.068417 CTCCGACCGACACAAACCA 59.932 57.895 0.00 0.00 0.00 3.67
324 325 0.531090 CTCCGACCGACACAAACCAA 60.531 55.000 0.00 0.00 0.00 3.67
325 326 0.810823 TCCGACCGACACAAACCAAC 60.811 55.000 0.00 0.00 0.00 3.77
326 327 1.274476 CGACCGACACAAACCAACG 59.726 57.895 0.00 0.00 0.00 4.10
327 328 1.010462 GACCGACACAAACCAACGC 60.010 57.895 0.00 0.00 0.00 4.84
328 329 1.707239 GACCGACACAAACCAACGCA 61.707 55.000 0.00 0.00 0.00 5.24
329 330 1.098712 ACCGACACAAACCAACGCAT 61.099 50.000 0.00 0.00 0.00 4.73
330 331 0.660005 CCGACACAAACCAACGCATG 60.660 55.000 0.00 0.00 0.00 4.06
331 332 0.028770 CGACACAAACCAACGCATGT 59.971 50.000 0.00 0.00 0.00 3.21
332 333 1.476074 GACACAAACCAACGCATGTG 58.524 50.000 4.30 4.30 46.52 3.21
333 334 0.527385 ACACAAACCAACGCATGTGC 60.527 50.000 6.08 0.00 45.36 4.57
334 335 1.067250 ACAAACCAACGCATGTGCC 59.933 52.632 6.08 0.00 37.91 5.01
335 336 2.015627 CAAACCAACGCATGTGCCG 61.016 57.895 6.08 0.00 37.91 5.69
336 337 2.485795 AAACCAACGCATGTGCCGT 61.486 52.632 6.08 0.00 37.91 5.68
337 338 2.010582 AAACCAACGCATGTGCCGTT 62.011 50.000 6.08 4.92 37.92 4.44
338 339 2.428902 CCAACGCATGTGCCGTTG 60.429 61.111 22.43 22.43 45.60 4.10
339 340 2.331098 CAACGCATGTGCCGTTGT 59.669 55.556 21.59 6.15 43.48 3.32
340 341 2.010286 CAACGCATGTGCCGTTGTG 61.010 57.895 21.59 5.60 43.48 3.33
341 342 3.192954 AACGCATGTGCCGTTGTGG 62.193 57.895 6.08 0.00 36.79 4.17
342 343 3.353029 CGCATGTGCCGTTGTGGA 61.353 61.111 0.00 0.00 42.00 4.02
343 344 2.255252 GCATGTGCCGTTGTGGAC 59.745 61.111 0.00 0.00 42.00 4.02
344 345 2.551006 GCATGTGCCGTTGTGGACA 61.551 57.895 0.00 0.00 42.00 4.02
345 346 1.282570 CATGTGCCGTTGTGGACAC 59.717 57.895 0.00 0.00 42.00 3.67
346 347 1.148273 ATGTGCCGTTGTGGACACT 59.852 52.632 3.91 0.00 42.06 3.55
347 348 1.165907 ATGTGCCGTTGTGGACACTG 61.166 55.000 3.91 0.00 42.06 3.66
348 349 2.899838 TGCCGTTGTGGACACTGC 60.900 61.111 3.91 2.66 42.00 4.40
349 350 4.012895 GCCGTTGTGGACACTGCG 62.013 66.667 3.91 7.87 42.00 5.18
350 351 2.279851 CCGTTGTGGACACTGCGA 60.280 61.111 16.20 0.00 42.00 5.10
351 352 1.667830 CCGTTGTGGACACTGCGAT 60.668 57.895 16.20 0.00 42.00 4.58
352 353 0.389296 CCGTTGTGGACACTGCGATA 60.389 55.000 16.20 0.00 42.00 2.92
353 354 0.992072 CGTTGTGGACACTGCGATAG 59.008 55.000 11.55 0.00 33.57 2.08
354 355 1.668919 CGTTGTGGACACTGCGATAGT 60.669 52.381 11.55 0.00 41.36 2.12
355 356 1.993370 GTTGTGGACACTGCGATAGTC 59.007 52.381 3.91 0.00 37.60 2.59
356 357 1.545841 TGTGGACACTGCGATAGTCT 58.454 50.000 3.91 0.00 37.60 3.24
357 358 2.718563 TGTGGACACTGCGATAGTCTA 58.281 47.619 3.91 0.00 37.60 2.59
358 359 3.288092 TGTGGACACTGCGATAGTCTAT 58.712 45.455 3.91 0.00 37.60 1.98
359 360 4.457466 TGTGGACACTGCGATAGTCTATA 58.543 43.478 3.91 0.00 37.60 1.31
360 361 5.070685 TGTGGACACTGCGATAGTCTATAT 58.929 41.667 3.91 0.00 37.60 0.86
361 362 6.235664 TGTGGACACTGCGATAGTCTATATA 58.764 40.000 3.91 0.00 37.60 0.86
362 363 6.884836 TGTGGACACTGCGATAGTCTATATAT 59.115 38.462 3.91 0.00 37.60 0.86
363 364 7.065923 TGTGGACACTGCGATAGTCTATATATC 59.934 40.741 3.91 0.00 37.60 1.63
364 365 6.542735 TGGACACTGCGATAGTCTATATATCC 59.457 42.308 0.00 0.00 37.60 2.59
365 366 6.016943 GGACACTGCGATAGTCTATATATCCC 60.017 46.154 0.00 0.00 37.60 3.85
366 367 5.527951 ACACTGCGATAGTCTATATATCCCG 59.472 44.000 0.00 0.00 37.60 5.14
367 368 5.758784 CACTGCGATAGTCTATATATCCCGA 59.241 44.000 0.00 0.00 37.60 5.14
368 369 5.759273 ACTGCGATAGTCTATATATCCCGAC 59.241 44.000 0.00 0.00 33.17 4.79
369 370 4.748600 TGCGATAGTCTATATATCCCGACG 59.251 45.833 0.00 0.00 39.35 5.12
370 371 4.749099 GCGATAGTCTATATATCCCGACGT 59.251 45.833 0.00 0.00 39.35 4.34
371 372 5.107530 GCGATAGTCTATATATCCCGACGTC 60.108 48.000 5.18 5.18 39.35 4.34
372 373 6.215121 CGATAGTCTATATATCCCGACGTCT 58.785 44.000 14.70 0.00 0.00 4.18
373 374 6.700960 CGATAGTCTATATATCCCGACGTCTT 59.299 42.308 14.70 0.00 0.00 3.01
374 375 7.224362 CGATAGTCTATATATCCCGACGTCTTT 59.776 40.741 14.70 0.00 0.00 2.52
375 376 6.740411 AGTCTATATATCCCGACGTCTTTC 57.260 41.667 14.70 0.00 0.00 2.62
376 377 6.474630 AGTCTATATATCCCGACGTCTTTCT 58.525 40.000 14.70 0.00 0.00 2.52
377 378 7.619050 AGTCTATATATCCCGACGTCTTTCTA 58.381 38.462 14.70 0.82 0.00 2.10
378 379 8.099537 AGTCTATATATCCCGACGTCTTTCTAA 58.900 37.037 14.70 0.00 0.00 2.10
379 380 8.389603 GTCTATATATCCCGACGTCTTTCTAAG 58.610 40.741 14.70 0.00 0.00 2.18
380 381 8.316946 TCTATATATCCCGACGTCTTTCTAAGA 58.683 37.037 14.70 3.02 34.51 2.10
381 382 5.692613 ATATCCCGACGTCTTTCTAAGAG 57.307 43.478 14.70 0.00 38.41 2.85
382 383 3.063510 TCCCGACGTCTTTCTAAGAGA 57.936 47.619 14.70 0.00 38.41 3.10
383 384 2.746362 TCCCGACGTCTTTCTAAGAGAC 59.254 50.000 14.70 0.00 38.41 3.36
391 392 5.942325 GTCTTTCTAAGAGACGAGAATGC 57.058 43.478 0.00 0.00 38.41 3.56
392 393 5.403246 GTCTTTCTAAGAGACGAGAATGCA 58.597 41.667 0.00 0.00 38.41 3.96
393 394 5.864474 GTCTTTCTAAGAGACGAGAATGCAA 59.136 40.000 0.00 0.00 38.41 4.08
394 395 6.366332 GTCTTTCTAAGAGACGAGAATGCAAA 59.634 38.462 0.00 0.00 38.41 3.68
395 396 7.064016 GTCTTTCTAAGAGACGAGAATGCAAAT 59.936 37.037 0.00 0.00 38.41 2.32
396 397 6.893958 TTCTAAGAGACGAGAATGCAAATC 57.106 37.500 0.00 0.00 0.00 2.17
397 398 5.037385 TCTAAGAGACGAGAATGCAAATCG 58.963 41.667 14.65 14.65 42.04 3.34
398 399 3.510388 AGAGACGAGAATGCAAATCGA 57.490 42.857 20.89 0.00 39.66 3.59
399 400 3.849911 AGAGACGAGAATGCAAATCGAA 58.150 40.909 20.89 0.00 39.66 3.71
400 401 4.245660 AGAGACGAGAATGCAAATCGAAA 58.754 39.130 20.89 0.00 39.66 3.46
401 402 4.690748 AGAGACGAGAATGCAAATCGAAAA 59.309 37.500 20.89 0.00 39.66 2.29
402 403 4.712763 AGACGAGAATGCAAATCGAAAAC 58.287 39.130 20.89 11.17 39.66 2.43
403 404 4.213270 AGACGAGAATGCAAATCGAAAACA 59.787 37.500 20.89 0.00 39.66 2.83
404 405 5.046910 ACGAGAATGCAAATCGAAAACAT 57.953 34.783 20.89 0.00 39.66 2.71
405 406 5.088739 ACGAGAATGCAAATCGAAAACATC 58.911 37.500 20.89 2.08 39.66 3.06
406 407 4.496895 CGAGAATGCAAATCGAAAACATCC 59.503 41.667 11.78 0.00 38.72 3.51
407 408 4.747810 AGAATGCAAATCGAAAACATCCC 58.252 39.130 0.00 0.00 0.00 3.85
408 409 3.525268 ATGCAAATCGAAAACATCCCC 57.475 42.857 0.00 0.00 0.00 4.81
409 410 2.524306 TGCAAATCGAAAACATCCCCT 58.476 42.857 0.00 0.00 0.00 4.79
410 411 2.230992 TGCAAATCGAAAACATCCCCTG 59.769 45.455 0.00 0.00 0.00 4.45
411 412 2.417243 GCAAATCGAAAACATCCCCTGG 60.417 50.000 0.00 0.00 0.00 4.45
412 413 2.143876 AATCGAAAACATCCCCTGGG 57.856 50.000 5.50 5.50 0.00 4.45
421 422 2.209809 TCCCCTGGGAAAGCCTCA 59.790 61.111 16.20 0.00 42.05 3.86
422 423 2.231380 TCCCCTGGGAAAGCCTCAC 61.231 63.158 16.20 0.00 42.05 3.51
423 424 2.045926 CCCTGGGAAAGCCTCACG 60.046 66.667 7.01 0.00 0.00 4.35
424 425 2.592993 CCCTGGGAAAGCCTCACGA 61.593 63.158 7.01 0.00 0.00 4.35
425 426 1.376037 CCTGGGAAAGCCTCACGAC 60.376 63.158 0.00 0.00 0.00 4.34
426 427 1.376037 CTGGGAAAGCCTCACGACC 60.376 63.158 0.00 0.00 0.00 4.79
427 428 1.831652 CTGGGAAAGCCTCACGACCT 61.832 60.000 0.00 0.00 0.00 3.85
428 429 1.376037 GGGAAAGCCTCACGACCTG 60.376 63.158 0.00 0.00 0.00 4.00
429 430 1.671742 GGAAAGCCTCACGACCTGA 59.328 57.895 0.00 0.00 0.00 3.86
430 431 0.250513 GGAAAGCCTCACGACCTGAT 59.749 55.000 0.00 0.00 0.00 2.90
431 432 1.363744 GAAAGCCTCACGACCTGATG 58.636 55.000 0.00 0.00 0.00 3.07
432 433 0.036010 AAAGCCTCACGACCTGATGG 60.036 55.000 0.00 0.00 39.83 3.51
441 442 3.000819 ACCTGATGGTCGGCGGAA 61.001 61.111 7.21 0.00 44.78 4.30
442 443 2.511600 CCTGATGGTCGGCGGAAC 60.512 66.667 7.21 1.66 0.00 3.62
443 444 2.264480 CTGATGGTCGGCGGAACA 59.736 61.111 14.93 14.93 45.66 3.18
444 445 1.375396 CTGATGGTCGGCGGAACAA 60.375 57.895 16.56 0.00 44.54 2.83
445 446 0.744414 CTGATGGTCGGCGGAACAAT 60.744 55.000 16.56 5.13 44.54 2.71
446 447 0.537653 TGATGGTCGGCGGAACAATA 59.462 50.000 16.56 5.48 44.54 1.90
447 448 1.066071 TGATGGTCGGCGGAACAATAA 60.066 47.619 16.56 2.13 44.54 1.40
448 449 2.218603 GATGGTCGGCGGAACAATAAT 58.781 47.619 16.56 0.00 44.54 1.28
449 450 1.374560 TGGTCGGCGGAACAATAATG 58.625 50.000 9.91 0.00 36.80 1.90
450 451 1.066071 TGGTCGGCGGAACAATAATGA 60.066 47.619 9.91 0.00 36.80 2.57
451 452 1.329599 GGTCGGCGGAACAATAATGAC 59.670 52.381 7.21 0.00 0.00 3.06
452 453 2.004017 GTCGGCGGAACAATAATGACA 58.996 47.619 7.21 0.00 0.00 3.58
453 454 2.417239 GTCGGCGGAACAATAATGACAA 59.583 45.455 7.21 0.00 0.00 3.18
454 455 2.417239 TCGGCGGAACAATAATGACAAC 59.583 45.455 7.21 0.00 0.00 3.32
455 456 2.418628 CGGCGGAACAATAATGACAACT 59.581 45.455 0.00 0.00 0.00 3.16
456 457 3.727673 CGGCGGAACAATAATGACAACTG 60.728 47.826 0.00 0.00 0.00 3.16
457 458 3.190535 GGCGGAACAATAATGACAACTGT 59.809 43.478 0.00 0.00 0.00 3.55
458 459 4.403453 GCGGAACAATAATGACAACTGTC 58.597 43.478 2.78 2.78 44.97 3.51
469 470 1.798813 GACAACTGTCGACATTCCACC 59.201 52.381 20.40 3.59 35.12 4.61
470 471 0.790207 CAACTGTCGACATTCCACCG 59.210 55.000 20.40 7.97 0.00 4.94
471 472 0.949105 AACTGTCGACATTCCACCGC 60.949 55.000 20.40 0.00 0.00 5.68
472 473 1.079819 CTGTCGACATTCCACCGCT 60.080 57.895 20.40 0.00 0.00 5.52
473 474 0.670546 CTGTCGACATTCCACCGCTT 60.671 55.000 20.40 0.00 0.00 4.68
474 475 0.948623 TGTCGACATTCCACCGCTTG 60.949 55.000 15.76 0.00 0.00 4.01
475 476 0.949105 GTCGACATTCCACCGCTTGT 60.949 55.000 11.55 0.00 0.00 3.16
476 477 0.250124 TCGACATTCCACCGCTTGTT 60.250 50.000 0.00 0.00 0.00 2.83
477 478 0.165944 CGACATTCCACCGCTTGTTC 59.834 55.000 0.00 0.00 0.00 3.18
478 479 1.523758 GACATTCCACCGCTTGTTCT 58.476 50.000 0.00 0.00 0.00 3.01
479 480 1.464997 GACATTCCACCGCTTGTTCTC 59.535 52.381 0.00 0.00 0.00 2.87
480 481 1.072331 ACATTCCACCGCTTGTTCTCT 59.928 47.619 0.00 0.00 0.00 3.10
481 482 2.154462 CATTCCACCGCTTGTTCTCTT 58.846 47.619 0.00 0.00 0.00 2.85
482 483 1.593196 TTCCACCGCTTGTTCTCTTG 58.407 50.000 0.00 0.00 0.00 3.02
483 484 0.250295 TCCACCGCTTGTTCTCTTGG 60.250 55.000 0.00 0.00 0.00 3.61
484 485 0.250295 CCACCGCTTGTTCTCTTGGA 60.250 55.000 0.00 0.00 0.00 3.53
485 486 1.611673 CCACCGCTTGTTCTCTTGGAT 60.612 52.381 0.00 0.00 0.00 3.41
486 487 1.466167 CACCGCTTGTTCTCTTGGATG 59.534 52.381 0.00 0.00 0.00 3.51
487 488 1.347707 ACCGCTTGTTCTCTTGGATGA 59.652 47.619 0.00 0.00 0.00 2.92
488 489 2.026822 ACCGCTTGTTCTCTTGGATGAT 60.027 45.455 0.00 0.00 0.00 2.45
489 490 2.611292 CCGCTTGTTCTCTTGGATGATC 59.389 50.000 0.00 0.00 0.00 2.92
490 491 3.264947 CGCTTGTTCTCTTGGATGATCA 58.735 45.455 0.00 0.00 0.00 2.92
491 492 3.063180 CGCTTGTTCTCTTGGATGATCAC 59.937 47.826 0.00 0.00 0.00 3.06
492 493 3.063180 GCTTGTTCTCTTGGATGATCACG 59.937 47.826 0.00 0.00 0.00 4.35
493 494 3.961480 TGTTCTCTTGGATGATCACGT 57.039 42.857 0.00 0.00 0.00 4.49
494 495 5.400066 TTGTTCTCTTGGATGATCACGTA 57.600 39.130 0.00 0.00 0.00 3.57
495 496 5.598416 TGTTCTCTTGGATGATCACGTAT 57.402 39.130 0.00 0.00 0.00 3.06
496 497 6.709018 TGTTCTCTTGGATGATCACGTATA 57.291 37.500 0.00 0.00 0.00 1.47
497 498 7.107639 TGTTCTCTTGGATGATCACGTATAA 57.892 36.000 0.00 0.00 0.00 0.98
498 499 7.726216 TGTTCTCTTGGATGATCACGTATAAT 58.274 34.615 0.00 0.00 0.00 1.28
499 500 7.867909 TGTTCTCTTGGATGATCACGTATAATC 59.132 37.037 0.00 0.00 0.00 1.75
500 501 7.524717 TCTCTTGGATGATCACGTATAATCA 57.475 36.000 0.00 9.15 36.40 2.57
501 502 7.597386 TCTCTTGGATGATCACGTATAATCAG 58.403 38.462 0.00 1.30 35.49 2.90
502 503 7.231519 TCTCTTGGATGATCACGTATAATCAGT 59.768 37.037 0.00 3.13 35.49 3.41
503 504 8.404107 TCTTGGATGATCACGTATAATCAGTA 57.596 34.615 0.00 1.32 35.49 2.74
504 505 8.297426 TCTTGGATGATCACGTATAATCAGTAC 58.703 37.037 0.00 0.00 35.49 2.73
505 506 7.519032 TGGATGATCACGTATAATCAGTACA 57.481 36.000 0.00 8.25 35.49 2.90
506 507 7.947282 TGGATGATCACGTATAATCAGTACAA 58.053 34.615 0.00 0.00 35.49 2.41
507 508 8.585018 TGGATGATCACGTATAATCAGTACAAT 58.415 33.333 0.00 0.00 35.49 2.71
554 555 6.747125 TCACGCATTTATTGGCAATGAATAT 58.253 32.000 24.35 13.51 34.05 1.28
555 556 6.641723 TCACGCATTTATTGGCAATGAATATG 59.358 34.615 24.35 21.36 34.05 1.78
577 578 0.841289 TCCTTCCAACCGTTTCCACT 59.159 50.000 0.00 0.00 0.00 4.00
578 579 1.202722 TCCTTCCAACCGTTTCCACTC 60.203 52.381 0.00 0.00 0.00 3.51
611 612 5.888161 ACCCTAACATAAGAAAATGCAGAGG 59.112 40.000 0.00 0.00 0.00 3.69
616 617 9.696917 CTAACATAAGAAAATGCAGAGGTTTTT 57.303 29.630 0.00 0.00 0.00 1.94
643 644 2.835580 TCGTCGATACCTCTAGGGAG 57.164 55.000 0.20 0.00 40.27 4.30
647 648 3.499157 CGTCGATACCTCTAGGGAGAAAG 59.501 52.174 0.20 0.00 41.86 2.62
649 650 3.462579 TCGATACCTCTAGGGAGAAAGGT 59.537 47.826 0.20 4.18 41.86 3.50
652 653 3.277416 ACCTCTAGGGAGAAAGGTGTT 57.723 47.619 0.20 0.00 41.86 3.32
653 654 3.174779 ACCTCTAGGGAGAAAGGTGTTC 58.825 50.000 0.20 0.00 41.86 3.18
654 655 2.502130 CCTCTAGGGAGAAAGGTGTTCC 59.498 54.545 0.00 0.00 41.86 3.62
655 656 2.166664 CTCTAGGGAGAAAGGTGTTCCG 59.833 54.545 0.00 0.00 41.86 4.30
656 657 1.900486 CTAGGGAGAAAGGTGTTCCGT 59.100 52.381 0.00 0.00 39.05 4.69
657 658 0.685660 AGGGAGAAAGGTGTTCCGTC 59.314 55.000 0.00 0.00 39.05 4.79
658 659 0.395312 GGGAGAAAGGTGTTCCGTCA 59.605 55.000 0.00 0.00 39.05 4.35
659 660 1.509703 GGAGAAAGGTGTTCCGTCAC 58.490 55.000 0.00 0.00 39.05 3.67
660 661 1.202604 GGAGAAAGGTGTTCCGTCACA 60.203 52.381 0.00 0.00 39.76 3.58
661 662 2.557317 GAGAAAGGTGTTCCGTCACAA 58.443 47.619 0.00 0.00 39.76 3.33
662 663 2.940410 GAGAAAGGTGTTCCGTCACAAA 59.060 45.455 0.00 0.00 39.76 2.83
676 677 4.511826 CCGTCACAAAATAGGGATAAGAGC 59.488 45.833 0.00 0.00 0.00 4.09
677 678 5.360591 CGTCACAAAATAGGGATAAGAGCT 58.639 41.667 0.00 0.00 0.00 4.09
680 681 7.475840 GTCACAAAATAGGGATAAGAGCTTTG 58.524 38.462 0.00 0.00 0.00 2.77
682 683 6.378280 CACAAAATAGGGATAAGAGCTTTGGT 59.622 38.462 0.00 0.00 0.00 3.67
688 689 4.058817 GGGATAAGAGCTTTGGTATCGTG 58.941 47.826 0.00 0.00 0.00 4.35
701 702 2.415512 GGTATCGTGAAGGAAGCACAAC 59.584 50.000 0.00 0.00 36.06 3.32
782 784 2.265589 TCTCGGAACACCCCTTTTTC 57.734 50.000 0.00 0.00 0.00 2.29
783 785 0.872388 CTCGGAACACCCCTTTTTCG 59.128 55.000 0.00 0.00 0.00 3.46
791 803 1.977009 CCCCTTTTTCGTGGGCCTC 60.977 63.158 4.53 0.00 42.03 4.70
955 971 1.220750 TCCCCTCCTCATACCTCTTCC 59.779 57.143 0.00 0.00 0.00 3.46
956 972 1.221781 CCCCTCCTCATACCTCTTCCT 59.778 57.143 0.00 0.00 0.00 3.36
958 977 2.178984 CCCTCCTCATACCTCTTCCTCT 59.821 54.545 0.00 0.00 0.00 3.69
961 980 3.135279 TCCTCATACCTCTTCCTCTCCT 58.865 50.000 0.00 0.00 0.00 3.69
962 981 3.139397 TCCTCATACCTCTTCCTCTCCTC 59.861 52.174 0.00 0.00 0.00 3.71
965 984 4.051478 TCATACCTCTTCCTCTCCTCTCT 58.949 47.826 0.00 0.00 0.00 3.10
966 985 4.104102 TCATACCTCTTCCTCTCCTCTCTC 59.896 50.000 0.00 0.00 0.00 3.20
967 986 2.573463 ACCTCTTCCTCTCCTCTCTCT 58.427 52.381 0.00 0.00 0.00 3.10
1245 1338 1.979155 GGCCAAGTCCAAGAAGCCC 60.979 63.158 0.00 0.00 34.23 5.19
1279 1372 3.636231 CTGCCAACGAGGGGTCCA 61.636 66.667 0.00 0.00 38.09 4.02
1280 1373 3.172106 TGCCAACGAGGGGTCCAA 61.172 61.111 0.00 0.00 38.09 3.53
1281 1374 2.359975 GCCAACGAGGGGTCCAAG 60.360 66.667 0.00 0.00 38.09 3.61
1282 1375 2.351276 CCAACGAGGGGTCCAAGG 59.649 66.667 0.00 0.00 0.00 3.61
1283 1376 2.351276 CAACGAGGGGTCCAAGGG 59.649 66.667 0.00 0.00 0.00 3.95
1284 1377 3.647771 AACGAGGGGTCCAAGGGC 61.648 66.667 0.00 0.00 0.00 5.19
1285 1378 4.974438 ACGAGGGGTCCAAGGGCA 62.974 66.667 0.00 0.00 0.00 5.36
1286 1379 3.646715 CGAGGGGTCCAAGGGCAA 61.647 66.667 0.00 0.00 0.00 4.52
1287 1380 2.851045 GAGGGGTCCAAGGGCAAA 59.149 61.111 0.00 0.00 0.00 3.68
1288 1381 1.304464 GAGGGGTCCAAGGGCAAAG 60.304 63.158 0.00 0.00 0.00 2.77
1289 1382 1.778383 AGGGGTCCAAGGGCAAAGA 60.778 57.895 0.00 0.00 0.00 2.52
1290 1383 1.606601 GGGGTCCAAGGGCAAAGAC 60.607 63.158 0.00 0.00 0.00 3.01
1291 1384 1.152830 GGGTCCAAGGGCAAAGACA 59.847 57.895 0.00 0.00 0.00 3.41
1292 1385 0.469144 GGGTCCAAGGGCAAAGACAA 60.469 55.000 0.00 0.00 0.00 3.18
1293 1386 0.961753 GGTCCAAGGGCAAAGACAAG 59.038 55.000 0.00 0.00 0.00 3.16
1294 1387 0.961753 GTCCAAGGGCAAAGACAAGG 59.038 55.000 0.00 0.00 0.00 3.61
1295 1388 0.827507 TCCAAGGGCAAAGACAAGGC 60.828 55.000 0.00 0.00 0.00 4.35
1296 1389 0.829182 CCAAGGGCAAAGACAAGGCT 60.829 55.000 0.00 0.00 0.00 4.58
1513 1606 2.968156 CCGCCACGTCCGTTTGAA 60.968 61.111 4.67 0.00 0.00 2.69
1518 1611 1.632046 CCACGTCCGTTTGAATCCCG 61.632 60.000 0.00 0.00 0.00 5.14
1618 1725 1.068541 GGGTGACGAATTTGTTGCCTC 60.069 52.381 15.12 6.19 0.00 4.70
1643 1750 2.182516 AATGTTTGGGTGGTTTGGGA 57.817 45.000 0.00 0.00 0.00 4.37
1651 1758 1.547901 GGGTGGTTTGGGAGGAGAAAG 60.548 57.143 0.00 0.00 0.00 2.62
1652 1759 1.547901 GGTGGTTTGGGAGGAGAAAGG 60.548 57.143 0.00 0.00 0.00 3.11
1656 1763 1.073923 GTTTGGGAGGAGAAAGGAGCA 59.926 52.381 0.00 0.00 0.00 4.26
1663 1770 4.447290 GGAGGAGAAAGGAGCAGTAAATC 58.553 47.826 0.00 0.00 0.00 2.17
1669 1776 5.625150 AGAAAGGAGCAGTAAATCACTTGT 58.375 37.500 0.00 0.00 34.26 3.16
1671 1778 3.944087 AGGAGCAGTAAATCACTTGTCC 58.056 45.455 0.00 0.00 37.03 4.02
1676 1783 5.564550 AGCAGTAAATCACTTGTCCTTGAT 58.435 37.500 0.00 0.00 34.26 2.57
1677 1784 5.413833 AGCAGTAAATCACTTGTCCTTGATG 59.586 40.000 0.00 0.00 34.26 3.07
1678 1785 5.412594 GCAGTAAATCACTTGTCCTTGATGA 59.587 40.000 0.00 0.00 34.26 2.92
1679 1786 6.094603 GCAGTAAATCACTTGTCCTTGATGAT 59.905 38.462 0.00 0.00 34.26 2.45
1680 1787 7.362401 GCAGTAAATCACTTGTCCTTGATGATT 60.362 37.037 0.00 0.00 40.77 2.57
1681 1788 8.180267 CAGTAAATCACTTGTCCTTGATGATTC 58.820 37.037 0.00 0.00 38.69 2.52
1692 1799 7.252708 TGTCCTTGATGATTCGATTCAATTTG 58.747 34.615 13.51 5.70 0.00 2.32
1710 1818 2.660064 GCTGGGTGGATCCGAGTGT 61.660 63.158 7.39 0.00 42.83 3.55
1727 1835 4.151258 AGTGTCGAATTTGATGCTTGTG 57.849 40.909 0.00 0.00 0.00 3.33
1739 1847 5.259832 TGATGCTTGTGTGAAATGTTTGA 57.740 34.783 0.00 0.00 0.00 2.69
1765 1874 1.222113 GGGGGAAGACAGCAGTAGC 59.778 63.158 0.00 0.00 42.56 3.58
1786 1895 4.768968 AGCAGTTAATTTCTTGGCATCAGT 59.231 37.500 0.00 0.00 0.00 3.41
1787 1896 5.945784 AGCAGTTAATTTCTTGGCATCAGTA 59.054 36.000 0.00 0.00 0.00 2.74
1788 1897 6.434028 AGCAGTTAATTTCTTGGCATCAGTAA 59.566 34.615 0.00 0.00 0.00 2.24
1789 1898 6.528072 GCAGTTAATTTCTTGGCATCAGTAAC 59.472 38.462 0.00 0.00 0.00 2.50
1790 1899 7.575720 GCAGTTAATTTCTTGGCATCAGTAACT 60.576 37.037 0.00 0.00 31.25 2.24
1851 1961 4.974888 GCTAATTGCTCTGCTTTAGATTGC 59.025 41.667 13.08 0.00 38.95 3.56
1852 1962 5.221009 GCTAATTGCTCTGCTTTAGATTGCT 60.221 40.000 13.08 0.00 38.95 3.91
1854 1964 3.339253 TGCTCTGCTTTAGATTGCTGA 57.661 42.857 0.00 0.00 34.21 4.26
1855 1965 3.005554 TGCTCTGCTTTAGATTGCTGAC 58.994 45.455 0.00 0.00 34.21 3.51
1856 1966 3.005554 GCTCTGCTTTAGATTGCTGACA 58.994 45.455 0.00 0.00 34.21 3.58
1857 1967 3.626670 GCTCTGCTTTAGATTGCTGACAT 59.373 43.478 0.00 0.00 34.21 3.06
1858 1968 4.813161 GCTCTGCTTTAGATTGCTGACATA 59.187 41.667 0.00 0.00 34.21 2.29
1860 1970 5.363101 TCTGCTTTAGATTGCTGACATAGG 58.637 41.667 0.00 0.00 33.41 2.57
1863 1973 4.712476 CTTTAGATTGCTGACATAGGGCT 58.288 43.478 0.00 0.00 0.00 5.19
1865 1975 2.121948 AGATTGCTGACATAGGGCTGA 58.878 47.619 0.00 0.00 0.00 4.26
1866 1976 2.104451 AGATTGCTGACATAGGGCTGAG 59.896 50.000 0.00 0.00 0.00 3.35
1867 1977 0.543277 TTGCTGACATAGGGCTGAGG 59.457 55.000 0.00 0.00 0.00 3.86
1868 1978 1.340399 TGCTGACATAGGGCTGAGGG 61.340 60.000 0.00 0.00 0.00 4.30
1869 1979 2.049627 GCTGACATAGGGCTGAGGGG 62.050 65.000 0.00 0.00 0.00 4.79
1870 1980 0.399091 CTGACATAGGGCTGAGGGGA 60.399 60.000 0.00 0.00 0.00 4.81
1871 1981 0.399091 TGACATAGGGCTGAGGGGAG 60.399 60.000 0.00 0.00 0.00 4.30
1872 1982 1.763546 GACATAGGGCTGAGGGGAGC 61.764 65.000 0.00 0.00 38.34 4.70
1873 1983 2.525381 ATAGGGCTGAGGGGAGCG 60.525 66.667 0.00 0.00 40.13 5.03
1963 2073 3.256631 GTCCCTGTGATGTGATGCTTTTT 59.743 43.478 0.00 0.00 0.00 1.94
1986 2096 6.094193 TGGATGATGATAGTGACATGAGTC 57.906 41.667 0.00 0.00 45.19 3.36
2137 2247 2.872858 GGAAGGTCAGTGTTGTTGTCTC 59.127 50.000 0.00 0.00 0.00 3.36
2140 2250 3.305720 AGGTCAGTGTTGTTGTCTCCTA 58.694 45.455 0.00 0.00 0.00 2.94
2193 2388 3.730761 CAGCTGTGCCCGTCAAGC 61.731 66.667 5.25 0.00 0.00 4.01
2195 2390 3.286751 GCTGTGCCCGTCAAGCAA 61.287 61.111 0.00 0.00 43.02 3.91
2199 2394 1.734117 GTGCCCGTCAAGCAAATGC 60.734 57.895 0.00 0.00 43.02 3.56
2311 2514 8.954950 TTAGATCTTCAGCTTAAAGAATCCAG 57.045 34.615 11.34 0.00 36.41 3.86
2357 2560 4.387862 CAGCATTGGAATTTCTTTGACTGC 59.612 41.667 0.00 0.00 0.00 4.40
2371 2603 6.957631 TCTTTGACTGCTTAATATCCTTCCA 58.042 36.000 0.00 0.00 0.00 3.53
2415 2651 7.484959 TGATAATAGCTATTGTATTCAGACGCG 59.515 37.037 25.99 3.53 0.00 6.01
2453 2689 9.979578 AAGAACATTTGTGTTTATTAGATTGCA 57.020 25.926 0.00 0.00 31.35 4.08
2454 2690 9.630098 AGAACATTTGTGTTTATTAGATTGCAG 57.370 29.630 0.00 0.00 31.35 4.41
2455 2691 7.816945 ACATTTGTGTTTATTAGATTGCAGC 57.183 32.000 0.00 0.00 0.00 5.25
2456 2692 6.813152 ACATTTGTGTTTATTAGATTGCAGCC 59.187 34.615 0.00 0.00 0.00 4.85
2520 2756 0.620556 TTCCACCATCCTCTGCCTTC 59.379 55.000 0.00 0.00 0.00 3.46
2533 2769 5.958380 TCCTCTGCCTTCAGTAAGATTTCTA 59.042 40.000 0.00 0.00 41.10 2.10
2546 2783 7.810282 CAGTAAGATTTCTATACCGTCCATCTG 59.190 40.741 0.00 0.00 0.00 2.90
2555 2792 3.526931 ACCGTCCATCTGATACAAGTG 57.473 47.619 0.00 0.00 0.00 3.16
2580 2817 4.214119 TCTGTTGCAGTCTTATGTTCTTGC 59.786 41.667 0.00 0.00 32.61 4.01
2635 2872 3.057736 GGAGTTTATATGCTGCATGGCTG 60.058 47.826 24.59 0.00 0.00 4.85
2657 2894 7.872993 GGCTGACTCTATGCAGTAATGTAAATA 59.127 37.037 0.00 0.00 34.66 1.40
2685 2922 2.271800 CAGTGGCTCGGTGATTTAGAC 58.728 52.381 0.00 0.00 0.00 2.59
2813 3052 3.068732 TCTGGGATTCGAGAGCATAACTG 59.931 47.826 0.00 0.00 0.00 3.16
2815 3054 2.548920 GGGATTCGAGAGCATAACTGGG 60.549 54.545 0.00 0.00 0.00 4.45
2826 3065 6.294473 AGAGCATAACTGGGAGTTGATAATG 58.706 40.000 0.00 0.00 39.11 1.90
2884 3123 7.714377 AGAACATTTGTGTTTATTGGATTGCAA 59.286 29.630 0.00 0.00 31.35 4.08
2902 3141 3.054582 TGCAATCAATCCTCTCTGCTTCT 60.055 43.478 0.00 0.00 0.00 2.85
2908 3147 6.219417 TCAATCCTCTCTGCTTCTTCTTAG 57.781 41.667 0.00 0.00 0.00 2.18
2915 3154 8.254508 TCCTCTCTGCTTCTTCTTAGAATTAAC 58.745 37.037 0.00 0.00 39.58 2.01
2942 3181 3.312736 ACAAACTTGTTCCACCATCCT 57.687 42.857 0.00 0.00 38.47 3.24
2943 3182 3.222603 ACAAACTTGTTCCACCATCCTC 58.777 45.455 0.00 0.00 38.47 3.71
2944 3183 3.221771 CAAACTTGTTCCACCATCCTCA 58.778 45.455 0.00 0.00 0.00 3.86
2945 3184 2.867109 ACTTGTTCCACCATCCTCAG 57.133 50.000 0.00 0.00 0.00 3.35
2946 3185 2.338809 ACTTGTTCCACCATCCTCAGA 58.661 47.619 0.00 0.00 0.00 3.27
2947 3186 2.039084 ACTTGTTCCACCATCCTCAGAC 59.961 50.000 0.00 0.00 0.00 3.51
2948 3187 2.030027 TGTTCCACCATCCTCAGACT 57.970 50.000 0.00 0.00 0.00 3.24
2949 3188 2.338809 TGTTCCACCATCCTCAGACTT 58.661 47.619 0.00 0.00 0.00 3.01
2950 3189 2.711009 TGTTCCACCATCCTCAGACTTT 59.289 45.455 0.00 0.00 0.00 2.66
2951 3190 3.907474 TGTTCCACCATCCTCAGACTTTA 59.093 43.478 0.00 0.00 0.00 1.85
2952 3191 4.536090 TGTTCCACCATCCTCAGACTTTAT 59.464 41.667 0.00 0.00 0.00 1.40
2953 3192 5.119694 GTTCCACCATCCTCAGACTTTATC 58.880 45.833 0.00 0.00 0.00 1.75
2961 3200 7.772757 ACCATCCTCAGACTTTATCAAGATTTC 59.227 37.037 0.00 0.00 33.72 2.17
2968 3207 9.035890 TCAGACTTTATCAAGATTTCTCTACCA 57.964 33.333 0.00 0.00 33.72 3.25
2977 3216 8.187913 TCAAGATTTCTCTACCATCTATCTGG 57.812 38.462 0.00 0.00 42.35 3.86
2991 3230 4.861196 TCTATCTGGTACAAGCTCTCACT 58.139 43.478 0.00 0.00 38.70 3.41
2994 3233 1.274728 CTGGTACAAGCTCTCACTGCT 59.725 52.381 0.00 0.00 43.32 4.24
2998 3237 1.302271 CAAGCTCTCACTGCTGCCA 60.302 57.895 0.00 0.00 41.03 4.92
3037 3276 5.824624 TGTTTCAGAGTTCAGAAGCAGAAAT 59.175 36.000 0.88 0.00 31.35 2.17
3049 3288 1.876497 GCAGAAATGCAGCCCGGAAA 61.876 55.000 0.73 0.00 34.41 3.13
3173 3412 8.101419 ACGAGGATTAGTTTTTCTGACCTTATT 58.899 33.333 0.00 0.00 0.00 1.40
3186 3425 7.246171 TCTGACCTTATTATAGGCTGAATCC 57.754 40.000 0.00 0.00 38.99 3.01
3246 3485 1.495584 TTGTGCTCTGTTTCGCGGTC 61.496 55.000 6.13 0.00 0.00 4.79
3320 3559 3.885901 TCATGTTTCCGTTCCAAACATCA 59.114 39.130 7.63 0.00 46.79 3.07
3404 3647 6.015010 TGGTGAAATATACTGTTTTGGGGTTG 60.015 38.462 0.00 0.00 0.00 3.77
3503 3747 5.123502 ACATCTTGTTCTGATCTGTCAATGC 59.876 40.000 0.00 0.00 33.05 3.56
3746 3991 7.452880 TGCAATATAAGCTGTTGTTTCTCTT 57.547 32.000 0.00 0.00 0.00 2.85
3797 4042 5.550290 TGCACATCTTGTTCTTCTGATACA 58.450 37.500 0.00 0.00 0.00 2.29
3852 4139 8.452534 TGTGTACTGTCGTAAACAAAGAAAAAT 58.547 29.630 0.00 0.00 40.11 1.82
3909 4196 4.181578 ACGACACTTATTTTGGATCGGAG 58.818 43.478 0.00 0.00 32.56 4.63
3915 4202 4.227527 ACTTATTTTGGATCGGAGGGAGTT 59.772 41.667 0.00 0.00 0.00 3.01
4077 4364 4.899352 ACATAGGTTTCAGTGAGCTTCT 57.101 40.909 0.00 0.00 0.00 2.85
4088 4375 4.222366 TCAGTGAGCTTCTCAGATTCACAT 59.778 41.667 13.80 1.44 41.46 3.21
4098 4385 7.413877 GCTTCTCAGATTCACATAGGAAAGTTG 60.414 40.741 0.00 0.00 0.00 3.16
4121 4408 5.034152 GCTTCGAACATGAACTGAAAACAA 58.966 37.500 0.00 0.00 0.00 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.604164 AGAAACACTCATCACATCGAAAAGTAT 59.396 33.333 0.00 0.00 0.00 2.12
2 3 5.760253 AGAAACACTCATCACATCGAAAAGT 59.240 36.000 0.00 0.00 0.00 2.66
4 5 6.228273 GAGAAACACTCATCACATCGAAAA 57.772 37.500 0.00 0.00 44.36 2.29
5 6 5.845985 GAGAAACACTCATCACATCGAAA 57.154 39.130 0.00 0.00 44.36 3.46
17 18 5.131067 ACCCAAACCTTTAGAGAAACACTC 58.869 41.667 0.00 0.00 45.22 3.51
18 19 5.125367 ACCCAAACCTTTAGAGAAACACT 57.875 39.130 0.00 0.00 0.00 3.55
19 20 5.451381 CCAACCCAAACCTTTAGAGAAACAC 60.451 44.000 0.00 0.00 0.00 3.32
20 21 4.647399 CCAACCCAAACCTTTAGAGAAACA 59.353 41.667 0.00 0.00 0.00 2.83
21 22 4.038763 CCCAACCCAAACCTTTAGAGAAAC 59.961 45.833 0.00 0.00 0.00 2.78
22 23 4.219919 CCCAACCCAAACCTTTAGAGAAA 58.780 43.478 0.00 0.00 0.00 2.52
23 24 3.205733 ACCCAACCCAAACCTTTAGAGAA 59.794 43.478 0.00 0.00 0.00 2.87
24 25 2.787035 ACCCAACCCAAACCTTTAGAGA 59.213 45.455 0.00 0.00 0.00 3.10
25 26 3.238788 ACCCAACCCAAACCTTTAGAG 57.761 47.619 0.00 0.00 0.00 2.43
26 27 3.691698 AACCCAACCCAAACCTTTAGA 57.308 42.857 0.00 0.00 0.00 2.10
27 28 4.407621 AGAAAACCCAACCCAAACCTTTAG 59.592 41.667 0.00 0.00 0.00 1.85
28 29 4.363573 AGAAAACCCAACCCAAACCTTTA 58.636 39.130 0.00 0.00 0.00 1.85
29 30 3.186283 AGAAAACCCAACCCAAACCTTT 58.814 40.909 0.00 0.00 0.00 3.11
30 31 2.840511 AGAAAACCCAACCCAAACCTT 58.159 42.857 0.00 0.00 0.00 3.50
31 32 2.561209 AGAAAACCCAACCCAAACCT 57.439 45.000 0.00 0.00 0.00 3.50
32 33 3.568443 TCTAGAAAACCCAACCCAAACC 58.432 45.455 0.00 0.00 0.00 3.27
33 34 5.069914 ACAATCTAGAAAACCCAACCCAAAC 59.930 40.000 0.00 0.00 0.00 2.93
34 35 5.069781 CACAATCTAGAAAACCCAACCCAAA 59.930 40.000 0.00 0.00 0.00 3.28
35 36 4.586841 CACAATCTAGAAAACCCAACCCAA 59.413 41.667 0.00 0.00 0.00 4.12
36 37 4.148838 CACAATCTAGAAAACCCAACCCA 58.851 43.478 0.00 0.00 0.00 4.51
37 38 3.509967 CCACAATCTAGAAAACCCAACCC 59.490 47.826 0.00 0.00 0.00 4.11
38 39 3.056821 GCCACAATCTAGAAAACCCAACC 60.057 47.826 0.00 0.00 0.00 3.77
39 40 3.365969 CGCCACAATCTAGAAAACCCAAC 60.366 47.826 0.00 0.00 0.00 3.77
40 41 2.817258 CGCCACAATCTAGAAAACCCAA 59.183 45.455 0.00 0.00 0.00 4.12
41 42 2.224670 ACGCCACAATCTAGAAAACCCA 60.225 45.455 0.00 0.00 0.00 4.51
42 43 2.161609 CACGCCACAATCTAGAAAACCC 59.838 50.000 0.00 0.00 0.00 4.11
43 44 3.071479 TCACGCCACAATCTAGAAAACC 58.929 45.455 0.00 0.00 0.00 3.27
44 45 4.154195 ACATCACGCCACAATCTAGAAAAC 59.846 41.667 0.00 0.00 0.00 2.43
45 46 4.154015 CACATCACGCCACAATCTAGAAAA 59.846 41.667 0.00 0.00 0.00 2.29
46 47 3.684305 CACATCACGCCACAATCTAGAAA 59.316 43.478 0.00 0.00 0.00 2.52
47 48 3.261580 CACATCACGCCACAATCTAGAA 58.738 45.455 0.00 0.00 0.00 2.10
48 49 2.233676 ACACATCACGCCACAATCTAGA 59.766 45.455 0.00 0.00 0.00 2.43
49 50 2.621338 ACACATCACGCCACAATCTAG 58.379 47.619 0.00 0.00 0.00 2.43
50 51 2.760634 ACACATCACGCCACAATCTA 57.239 45.000 0.00 0.00 0.00 1.98
51 52 1.896220 AACACATCACGCCACAATCT 58.104 45.000 0.00 0.00 0.00 2.40
52 53 2.704725 AAACACATCACGCCACAATC 57.295 45.000 0.00 0.00 0.00 2.67
53 54 4.782019 ATAAAACACATCACGCCACAAT 57.218 36.364 0.00 0.00 0.00 2.71
54 55 4.576216 AATAAAACACATCACGCCACAA 57.424 36.364 0.00 0.00 0.00 3.33
55 56 4.576216 AAATAAAACACATCACGCCACA 57.424 36.364 0.00 0.00 0.00 4.17
56 57 5.915758 TGTAAAATAAAACACATCACGCCAC 59.084 36.000 0.00 0.00 0.00 5.01
57 58 6.073327 TGTAAAATAAAACACATCACGCCA 57.927 33.333 0.00 0.00 0.00 5.69
58 59 6.994868 TTGTAAAATAAAACACATCACGCC 57.005 33.333 0.00 0.00 0.00 5.68
59 60 8.002433 ACATTGTAAAATAAAACACATCACGC 57.998 30.769 0.00 0.00 0.00 5.34
87 88 8.730680 GCCTACTTTCATTTCTAATTCTTCACA 58.269 33.333 0.00 0.00 0.00 3.58
88 89 8.730680 TGCCTACTTTCATTTCTAATTCTTCAC 58.269 33.333 0.00 0.00 0.00 3.18
89 90 8.862325 TGCCTACTTTCATTTCTAATTCTTCA 57.138 30.769 0.00 0.00 0.00 3.02
92 93 8.246871 GCTTTGCCTACTTTCATTTCTAATTCT 58.753 33.333 0.00 0.00 0.00 2.40
93 94 8.028938 TGCTTTGCCTACTTTCATTTCTAATTC 58.971 33.333 0.00 0.00 0.00 2.17
94 95 7.895759 TGCTTTGCCTACTTTCATTTCTAATT 58.104 30.769 0.00 0.00 0.00 1.40
95 96 7.363268 CCTGCTTTGCCTACTTTCATTTCTAAT 60.363 37.037 0.00 0.00 0.00 1.73
96 97 6.071952 CCTGCTTTGCCTACTTTCATTTCTAA 60.072 38.462 0.00 0.00 0.00 2.10
97 98 5.415701 CCTGCTTTGCCTACTTTCATTTCTA 59.584 40.000 0.00 0.00 0.00 2.10
98 99 4.219288 CCTGCTTTGCCTACTTTCATTTCT 59.781 41.667 0.00 0.00 0.00 2.52
99 100 4.021981 ACCTGCTTTGCCTACTTTCATTTC 60.022 41.667 0.00 0.00 0.00 2.17
100 101 3.897505 ACCTGCTTTGCCTACTTTCATTT 59.102 39.130 0.00 0.00 0.00 2.32
101 102 3.500343 ACCTGCTTTGCCTACTTTCATT 58.500 40.909 0.00 0.00 0.00 2.57
102 103 3.160679 ACCTGCTTTGCCTACTTTCAT 57.839 42.857 0.00 0.00 0.00 2.57
103 104 2.656947 ACCTGCTTTGCCTACTTTCA 57.343 45.000 0.00 0.00 0.00 2.69
104 105 5.220381 GTTTAACCTGCTTTGCCTACTTTC 58.780 41.667 0.00 0.00 0.00 2.62
105 106 4.647399 TGTTTAACCTGCTTTGCCTACTTT 59.353 37.500 0.00 0.00 0.00 2.66
106 107 4.211920 TGTTTAACCTGCTTTGCCTACTT 58.788 39.130 0.00 0.00 0.00 2.24
107 108 3.827722 TGTTTAACCTGCTTTGCCTACT 58.172 40.909 0.00 0.00 0.00 2.57
108 109 4.577834 TTGTTTAACCTGCTTTGCCTAC 57.422 40.909 0.00 0.00 0.00 3.18
109 110 5.599999 TTTTGTTTAACCTGCTTTGCCTA 57.400 34.783 0.00 0.00 0.00 3.93
110 111 4.479786 TTTTGTTTAACCTGCTTTGCCT 57.520 36.364 0.00 0.00 0.00 4.75
111 112 4.634004 AGTTTTTGTTTAACCTGCTTTGCC 59.366 37.500 0.00 0.00 0.00 4.52
112 113 5.794687 AGTTTTTGTTTAACCTGCTTTGC 57.205 34.783 0.00 0.00 0.00 3.68
116 117 9.758651 CCTATTTTAGTTTTTGTTTAACCTGCT 57.241 29.630 0.00 0.00 0.00 4.24
117 118 9.752961 TCCTATTTTAGTTTTTGTTTAACCTGC 57.247 29.630 0.00 0.00 0.00 4.85
140 141 8.376270 GGTAACAACAATTAGCCTCTATATCCT 58.624 37.037 0.00 0.00 0.00 3.24
141 142 7.331193 CGGTAACAACAATTAGCCTCTATATCC 59.669 40.741 0.00 0.00 30.35 2.59
142 143 7.148623 GCGGTAACAACAATTAGCCTCTATATC 60.149 40.741 0.00 0.00 30.35 1.63
143 144 6.649557 GCGGTAACAACAATTAGCCTCTATAT 59.350 38.462 0.00 0.00 30.35 0.86
144 145 5.987347 GCGGTAACAACAATTAGCCTCTATA 59.013 40.000 0.00 0.00 30.35 1.31
145 146 4.814771 GCGGTAACAACAATTAGCCTCTAT 59.185 41.667 0.00 0.00 30.35 1.98
146 147 4.186159 GCGGTAACAACAATTAGCCTCTA 58.814 43.478 0.00 0.00 30.35 2.43
147 148 3.007635 GCGGTAACAACAATTAGCCTCT 58.992 45.455 0.00 0.00 30.35 3.69
148 149 2.745281 TGCGGTAACAACAATTAGCCTC 59.255 45.455 0.00 0.00 30.35 4.70
149 150 2.785562 TGCGGTAACAACAATTAGCCT 58.214 42.857 0.00 0.00 30.35 4.58
150 151 3.562567 TTGCGGTAACAACAATTAGCC 57.437 42.857 0.00 0.00 30.35 3.93
151 152 4.728534 TCATTGCGGTAACAACAATTAGC 58.271 39.130 0.00 0.00 40.07 3.09
152 153 7.630470 TTTTCATTGCGGTAACAACAATTAG 57.370 32.000 0.00 0.00 40.07 1.73
154 155 6.910536 TTTTTCATTGCGGTAACAACAATT 57.089 29.167 0.00 0.00 40.07 2.32
180 181 9.750125 GAAGAAGATTGTTGGTGAGTTTTTATT 57.250 29.630 0.00 0.00 0.00 1.40
181 182 9.136323 AGAAGAAGATTGTTGGTGAGTTTTTAT 57.864 29.630 0.00 0.00 0.00 1.40
182 183 8.519799 AGAAGAAGATTGTTGGTGAGTTTTTA 57.480 30.769 0.00 0.00 0.00 1.52
183 184 7.410120 AGAAGAAGATTGTTGGTGAGTTTTT 57.590 32.000 0.00 0.00 0.00 1.94
184 185 7.410120 AAGAAGAAGATTGTTGGTGAGTTTT 57.590 32.000 0.00 0.00 0.00 2.43
185 186 7.410120 AAAGAAGAAGATTGTTGGTGAGTTT 57.590 32.000 0.00 0.00 0.00 2.66
186 187 6.039829 GGAAAGAAGAAGATTGTTGGTGAGTT 59.960 38.462 0.00 0.00 0.00 3.01
187 188 5.532779 GGAAAGAAGAAGATTGTTGGTGAGT 59.467 40.000 0.00 0.00 0.00 3.41
188 189 5.334414 CGGAAAGAAGAAGATTGTTGGTGAG 60.334 44.000 0.00 0.00 0.00 3.51
189 190 4.515191 CGGAAAGAAGAAGATTGTTGGTGA 59.485 41.667 0.00 0.00 0.00 4.02
190 191 4.787598 CGGAAAGAAGAAGATTGTTGGTG 58.212 43.478 0.00 0.00 0.00 4.17
191 192 3.253432 GCGGAAAGAAGAAGATTGTTGGT 59.747 43.478 0.00 0.00 0.00 3.67
192 193 3.366374 GGCGGAAAGAAGAAGATTGTTGG 60.366 47.826 0.00 0.00 0.00 3.77
193 194 3.366374 GGGCGGAAAGAAGAAGATTGTTG 60.366 47.826 0.00 0.00 0.00 3.33
194 195 2.820197 GGGCGGAAAGAAGAAGATTGTT 59.180 45.455 0.00 0.00 0.00 2.83
195 196 2.224769 TGGGCGGAAAGAAGAAGATTGT 60.225 45.455 0.00 0.00 0.00 2.71
196 197 2.421424 CTGGGCGGAAAGAAGAAGATTG 59.579 50.000 0.00 0.00 0.00 2.67
197 198 2.305927 TCTGGGCGGAAAGAAGAAGATT 59.694 45.455 0.00 0.00 0.00 2.40
198 199 1.909302 TCTGGGCGGAAAGAAGAAGAT 59.091 47.619 0.00 0.00 0.00 2.40
199 200 1.276421 CTCTGGGCGGAAAGAAGAAGA 59.724 52.381 0.00 0.00 0.00 2.87
200 201 1.677217 CCTCTGGGCGGAAAGAAGAAG 60.677 57.143 0.00 0.00 0.00 2.85
201 202 0.324943 CCTCTGGGCGGAAAGAAGAA 59.675 55.000 0.00 0.00 0.00 2.52
202 203 0.544357 TCCTCTGGGCGGAAAGAAGA 60.544 55.000 0.00 0.00 0.00 2.87
203 204 0.324943 TTCCTCTGGGCGGAAAGAAG 59.675 55.000 0.00 0.00 37.59 2.85
204 205 0.768622 TTTCCTCTGGGCGGAAAGAA 59.231 50.000 0.40 0.00 43.57 2.52
205 206 2.458892 TTTCCTCTGGGCGGAAAGA 58.541 52.632 0.40 0.00 43.57 2.52
207 208 1.302192 CGTTTCCTCTGGGCGGAAA 60.302 57.895 0.40 0.40 45.57 3.13
208 209 1.760479 TTCGTTTCCTCTGGGCGGAA 61.760 55.000 0.00 0.00 38.71 4.30
209 210 1.550130 ATTCGTTTCCTCTGGGCGGA 61.550 55.000 0.00 0.00 0.00 5.54
210 211 1.078426 ATTCGTTTCCTCTGGGCGG 60.078 57.895 0.00 0.00 0.00 6.13
211 212 1.982073 GCATTCGTTTCCTCTGGGCG 61.982 60.000 0.00 0.00 0.00 6.13
212 213 1.657751 GGCATTCGTTTCCTCTGGGC 61.658 60.000 0.00 0.00 0.00 5.36
213 214 1.369091 CGGCATTCGTTTCCTCTGGG 61.369 60.000 0.00 0.00 0.00 4.45
214 215 1.369091 CCGGCATTCGTTTCCTCTGG 61.369 60.000 0.00 0.00 37.11 3.86
215 216 1.982073 GCCGGCATTCGTTTCCTCTG 61.982 60.000 24.80 0.00 37.11 3.35
216 217 1.745489 GCCGGCATTCGTTTCCTCT 60.745 57.895 24.80 0.00 37.11 3.69
217 218 2.761195 GGCCGGCATTCGTTTCCTC 61.761 63.158 30.85 1.22 37.11 3.71
218 219 2.750237 GGCCGGCATTCGTTTCCT 60.750 61.111 30.85 0.00 37.11 3.36
219 220 2.266376 GAAGGCCGGCATTCGTTTCC 62.266 60.000 34.85 14.82 37.11 3.13
220 221 1.136774 GAAGGCCGGCATTCGTTTC 59.863 57.895 34.85 15.96 37.11 2.78
221 222 1.602323 TGAAGGCCGGCATTCGTTT 60.602 52.632 39.00 15.73 39.29 3.60
222 223 2.033448 TGAAGGCCGGCATTCGTT 59.967 55.556 39.00 20.34 39.29 3.85
223 224 2.746277 GTGAAGGCCGGCATTCGT 60.746 61.111 39.00 16.54 39.29 3.85
224 225 3.508840 GGTGAAGGCCGGCATTCG 61.509 66.667 39.00 0.00 39.29 3.34
225 226 3.140814 GGGTGAAGGCCGGCATTC 61.141 66.667 39.32 39.32 37.27 2.67
226 227 4.759205 GGGGTGAAGGCCGGCATT 62.759 66.667 28.81 28.81 0.00 3.56
232 233 4.410400 CTCGGTGGGGTGAAGGCC 62.410 72.222 0.00 0.00 0.00 5.19
233 234 2.406002 TTTCTCGGTGGGGTGAAGGC 62.406 60.000 0.00 0.00 0.00 4.35
234 235 0.109723 TTTTCTCGGTGGGGTGAAGG 59.890 55.000 0.00 0.00 0.00 3.46
235 236 1.975660 TTTTTCTCGGTGGGGTGAAG 58.024 50.000 0.00 0.00 0.00 3.02
251 252 4.813296 ATTCAACGCGAGAAGAGTTTTT 57.187 36.364 15.93 0.00 40.91 1.94
252 253 4.527564 CAATTCAACGCGAGAAGAGTTTT 58.472 39.130 15.93 4.67 40.91 2.43
253 254 3.058914 CCAATTCAACGCGAGAAGAGTTT 60.059 43.478 15.93 5.04 40.91 2.66
254 255 2.480419 CCAATTCAACGCGAGAAGAGTT 59.520 45.455 15.93 5.40 43.66 3.01
255 256 2.069273 CCAATTCAACGCGAGAAGAGT 58.931 47.619 15.93 3.69 0.00 3.24
256 257 1.394917 CCCAATTCAACGCGAGAAGAG 59.605 52.381 15.93 12.36 0.00 2.85
257 258 1.438651 CCCAATTCAACGCGAGAAGA 58.561 50.000 15.93 1.18 0.00 2.87
258 259 0.447801 CCCCAATTCAACGCGAGAAG 59.552 55.000 15.93 5.77 0.00 2.85
259 260 1.582610 GCCCCAATTCAACGCGAGAA 61.583 55.000 15.93 17.20 0.00 2.87
260 261 2.038269 GCCCCAATTCAACGCGAGA 61.038 57.895 15.93 7.66 0.00 4.04
261 262 2.485122 GCCCCAATTCAACGCGAG 59.515 61.111 15.93 4.76 0.00 5.03
262 263 3.427425 CGCCCCAATTCAACGCGA 61.427 61.111 15.93 0.00 45.41 5.87
263 264 2.465097 TTTCGCCCCAATTCAACGCG 62.465 55.000 3.53 3.53 44.00 6.01
264 265 0.732538 CTTTCGCCCCAATTCAACGC 60.733 55.000 0.00 0.00 0.00 4.84
265 266 0.109319 CCTTTCGCCCCAATTCAACG 60.109 55.000 0.00 0.00 0.00 4.10
266 267 0.389817 GCCTTTCGCCCCAATTCAAC 60.390 55.000 0.00 0.00 0.00 3.18
267 268 0.541764 AGCCTTTCGCCCCAATTCAA 60.542 50.000 0.00 0.00 38.78 2.69
268 269 1.076549 AGCCTTTCGCCCCAATTCA 59.923 52.632 0.00 0.00 38.78 2.57
269 270 1.512694 CAGCCTTTCGCCCCAATTC 59.487 57.895 0.00 0.00 38.78 2.17
270 271 1.984026 CCAGCCTTTCGCCCCAATT 60.984 57.895 0.00 0.00 38.78 2.32
271 272 2.362889 CCAGCCTTTCGCCCCAAT 60.363 61.111 0.00 0.00 38.78 3.16
283 284 0.822532 CCATGAGATCAAGGCCAGCC 60.823 60.000 5.01 0.00 0.00 4.85
284 285 0.182061 TCCATGAGATCAAGGCCAGC 59.818 55.000 5.01 0.00 34.89 4.85
285 286 1.476471 GGTCCATGAGATCAAGGCCAG 60.476 57.143 5.01 0.00 34.89 4.85
286 287 0.548031 GGTCCATGAGATCAAGGCCA 59.452 55.000 5.01 0.00 34.89 5.36
287 288 0.842635 AGGTCCATGAGATCAAGGCC 59.157 55.000 0.00 0.00 34.89 5.19
288 289 1.202746 GGAGGTCCATGAGATCAAGGC 60.203 57.143 0.00 0.00 34.89 4.35
289 290 1.069823 CGGAGGTCCATGAGATCAAGG 59.930 57.143 0.00 0.00 36.14 3.61
290 291 2.034878 TCGGAGGTCCATGAGATCAAG 58.965 52.381 0.00 0.00 35.14 3.02
291 292 1.757118 GTCGGAGGTCCATGAGATCAA 59.243 52.381 0.00 0.00 35.14 2.57
292 293 1.403814 GTCGGAGGTCCATGAGATCA 58.596 55.000 0.00 0.00 35.14 2.92
293 294 0.676736 GGTCGGAGGTCCATGAGATC 59.323 60.000 0.00 0.00 35.14 2.75
294 295 1.109920 CGGTCGGAGGTCCATGAGAT 61.110 60.000 0.00 0.00 35.14 2.75
295 296 1.753078 CGGTCGGAGGTCCATGAGA 60.753 63.158 0.00 0.00 35.14 3.27
296 297 1.753078 TCGGTCGGAGGTCCATGAG 60.753 63.158 0.00 0.00 35.14 2.90
297 298 2.050350 GTCGGTCGGAGGTCCATGA 61.050 63.158 0.00 0.00 35.14 3.07
298 299 2.348104 TGTCGGTCGGAGGTCCATG 61.348 63.158 0.00 0.00 35.14 3.66
299 300 2.036731 TGTCGGTCGGAGGTCCAT 59.963 61.111 0.00 0.00 35.14 3.41
300 301 2.987547 GTGTCGGTCGGAGGTCCA 60.988 66.667 0.00 0.00 35.14 4.02
301 302 2.091102 TTTGTGTCGGTCGGAGGTCC 62.091 60.000 0.00 0.00 0.00 4.46
302 303 0.942884 GTTTGTGTCGGTCGGAGGTC 60.943 60.000 0.00 0.00 0.00 3.85
303 304 1.068585 GTTTGTGTCGGTCGGAGGT 59.931 57.895 0.00 0.00 0.00 3.85
304 305 1.666872 GGTTTGTGTCGGTCGGAGG 60.667 63.158 0.00 0.00 0.00 4.30
305 306 0.531090 TTGGTTTGTGTCGGTCGGAG 60.531 55.000 0.00 0.00 0.00 4.63
306 307 0.810823 GTTGGTTTGTGTCGGTCGGA 60.811 55.000 0.00 0.00 0.00 4.55
307 308 1.644913 GTTGGTTTGTGTCGGTCGG 59.355 57.895 0.00 0.00 0.00 4.79
308 309 1.274476 CGTTGGTTTGTGTCGGTCG 59.726 57.895 0.00 0.00 0.00 4.79
309 310 1.010462 GCGTTGGTTTGTGTCGGTC 60.010 57.895 0.00 0.00 0.00 4.79
310 311 1.098712 ATGCGTTGGTTTGTGTCGGT 61.099 50.000 0.00 0.00 0.00 4.69
311 312 0.660005 CATGCGTTGGTTTGTGTCGG 60.660 55.000 0.00 0.00 0.00 4.79
312 313 0.028770 ACATGCGTTGGTTTGTGTCG 59.971 50.000 0.00 0.00 0.00 4.35
313 314 1.476074 CACATGCGTTGGTTTGTGTC 58.524 50.000 0.00 0.00 35.79 3.67
314 315 0.527385 GCACATGCGTTGGTTTGTGT 60.527 50.000 0.00 0.00 41.14 3.72
315 316 1.214373 GGCACATGCGTTGGTTTGTG 61.214 55.000 0.00 0.00 43.26 3.33
316 317 1.067250 GGCACATGCGTTGGTTTGT 59.933 52.632 0.00 0.00 43.26 2.83
317 318 2.015627 CGGCACATGCGTTGGTTTG 61.016 57.895 0.00 0.00 43.26 2.93
318 319 2.010582 AACGGCACATGCGTTGGTTT 62.011 50.000 8.50 0.00 43.26 3.27
319 320 2.485795 AACGGCACATGCGTTGGTT 61.486 52.632 8.50 4.92 43.26 3.67
320 321 2.904866 AACGGCACATGCGTTGGT 60.905 55.556 8.50 0.00 43.26 3.67
321 322 2.428902 CAACGGCACATGCGTTGG 60.429 61.111 21.94 9.35 43.26 3.77
322 323 2.010286 CACAACGGCACATGCGTTG 61.010 57.895 25.60 25.60 43.26 4.10
323 324 2.331098 CACAACGGCACATGCGTT 59.669 55.556 4.08 4.08 43.26 4.84
324 325 3.659092 CCACAACGGCACATGCGT 61.659 61.111 0.00 0.00 43.26 5.24
325 326 3.353029 TCCACAACGGCACATGCG 61.353 61.111 0.00 0.00 43.26 4.73
326 327 2.255252 GTCCACAACGGCACATGC 59.745 61.111 0.00 0.00 41.14 4.06
327 328 1.165907 AGTGTCCACAACGGCACATG 61.166 55.000 0.00 0.00 41.54 3.21
328 329 1.148273 AGTGTCCACAACGGCACAT 59.852 52.632 0.00 0.00 41.54 3.21
329 330 1.817520 CAGTGTCCACAACGGCACA 60.818 57.895 0.00 0.00 41.54 4.57
330 331 3.022287 CAGTGTCCACAACGGCAC 58.978 61.111 0.00 0.00 40.24 5.01
331 332 2.899838 GCAGTGTCCACAACGGCA 60.900 61.111 0.00 0.00 33.14 5.69
332 333 4.012895 CGCAGTGTCCACAACGGC 62.013 66.667 0.00 0.00 33.14 5.68
333 334 0.389296 TATCGCAGTGTCCACAACGG 60.389 55.000 10.75 0.00 34.23 4.44
334 335 0.992072 CTATCGCAGTGTCCACAACG 59.008 55.000 0.00 3.29 34.58 4.10
335 336 1.993370 GACTATCGCAGTGTCCACAAC 59.007 52.381 0.00 0.00 37.72 3.32
336 337 1.893137 AGACTATCGCAGTGTCCACAA 59.107 47.619 0.00 0.00 37.72 3.33
337 338 1.545841 AGACTATCGCAGTGTCCACA 58.454 50.000 0.00 0.00 37.72 4.17
338 339 3.992260 ATAGACTATCGCAGTGTCCAC 57.008 47.619 0.00 0.00 37.72 4.02
339 340 6.542735 GGATATATAGACTATCGCAGTGTCCA 59.457 42.308 0.00 0.00 37.72 4.02
340 341 6.016943 GGGATATATAGACTATCGCAGTGTCC 60.017 46.154 0.00 0.00 37.72 4.02
341 342 6.292973 CGGGATATATAGACTATCGCAGTGTC 60.293 46.154 0.00 0.00 37.72 3.67
342 343 5.527951 CGGGATATATAGACTATCGCAGTGT 59.472 44.000 0.00 0.00 37.72 3.55
343 344 5.758784 TCGGGATATATAGACTATCGCAGTG 59.241 44.000 0.00 0.00 37.72 3.66
344 345 5.759273 GTCGGGATATATAGACTATCGCAGT 59.241 44.000 0.00 0.00 41.47 4.40
345 346 5.107414 CGTCGGGATATATAGACTATCGCAG 60.107 48.000 0.00 3.75 38.03 5.18
346 347 4.748600 CGTCGGGATATATAGACTATCGCA 59.251 45.833 0.00 0.00 38.03 5.10
347 348 4.749099 ACGTCGGGATATATAGACTATCGC 59.251 45.833 0.00 0.00 36.01 4.58
348 349 6.215121 AGACGTCGGGATATATAGACTATCG 58.785 44.000 10.46 0.00 0.00 2.92
349 350 8.436046 AAAGACGTCGGGATATATAGACTATC 57.564 38.462 10.46 9.34 0.00 2.08
350 351 8.266473 AGAAAGACGTCGGGATATATAGACTAT 58.734 37.037 10.46 0.00 0.00 2.12
351 352 7.619050 AGAAAGACGTCGGGATATATAGACTA 58.381 38.462 10.46 0.00 0.00 2.59
352 353 6.474630 AGAAAGACGTCGGGATATATAGACT 58.525 40.000 10.46 0.00 0.00 3.24
353 354 6.740411 AGAAAGACGTCGGGATATATAGAC 57.260 41.667 10.46 5.75 0.00 2.59
354 355 8.316946 TCTTAGAAAGACGTCGGGATATATAGA 58.683 37.037 10.46 3.86 31.20 1.98
355 356 8.489990 TCTTAGAAAGACGTCGGGATATATAG 57.510 38.462 10.46 1.57 31.20 1.31
356 357 8.316946 TCTCTTAGAAAGACGTCGGGATATATA 58.683 37.037 10.46 0.00 33.12 0.86
357 358 7.119553 GTCTCTTAGAAAGACGTCGGGATATAT 59.880 40.741 10.46 0.00 34.33 0.86
358 359 6.426328 GTCTCTTAGAAAGACGTCGGGATATA 59.574 42.308 10.46 0.00 34.33 0.86
359 360 5.239087 GTCTCTTAGAAAGACGTCGGGATAT 59.761 44.000 10.46 0.00 34.33 1.63
360 361 4.574013 GTCTCTTAGAAAGACGTCGGGATA 59.426 45.833 10.46 0.00 34.33 2.59
361 362 3.377798 GTCTCTTAGAAAGACGTCGGGAT 59.622 47.826 10.46 0.68 34.33 3.85
362 363 2.746362 GTCTCTTAGAAAGACGTCGGGA 59.254 50.000 10.46 0.00 34.33 5.14
363 364 3.134021 GTCTCTTAGAAAGACGTCGGG 57.866 52.381 10.46 0.00 34.33 5.14
369 370 5.403246 TGCATTCTCGTCTCTTAGAAAGAC 58.597 41.667 0.00 0.00 39.82 3.01
370 371 5.644977 TGCATTCTCGTCTCTTAGAAAGA 57.355 39.130 0.00 0.00 35.47 2.52
371 372 6.712241 TTTGCATTCTCGTCTCTTAGAAAG 57.288 37.500 0.00 0.00 35.47 2.62
372 373 6.035005 CGATTTGCATTCTCGTCTCTTAGAAA 59.965 38.462 0.00 0.00 35.47 2.52
373 374 5.516696 CGATTTGCATTCTCGTCTCTTAGAA 59.483 40.000 0.00 0.00 36.24 2.10
374 375 5.037385 CGATTTGCATTCTCGTCTCTTAGA 58.963 41.667 0.00 0.00 0.00 2.10
375 376 5.037385 TCGATTTGCATTCTCGTCTCTTAG 58.963 41.667 11.33 0.00 34.19 2.18
376 377 4.993905 TCGATTTGCATTCTCGTCTCTTA 58.006 39.130 11.33 0.00 34.19 2.10
377 378 3.849911 TCGATTTGCATTCTCGTCTCTT 58.150 40.909 11.33 0.00 34.19 2.85
378 379 3.510388 TCGATTTGCATTCTCGTCTCT 57.490 42.857 11.33 0.00 34.19 3.10
379 380 4.584029 TTTCGATTTGCATTCTCGTCTC 57.416 40.909 11.33 0.00 34.19 3.36
380 381 4.213270 TGTTTTCGATTTGCATTCTCGTCT 59.787 37.500 11.33 0.00 34.19 4.18
381 382 4.463209 TGTTTTCGATTTGCATTCTCGTC 58.537 39.130 11.33 4.40 34.19 4.20
382 383 4.481930 TGTTTTCGATTTGCATTCTCGT 57.518 36.364 11.33 0.00 34.19 4.18
383 384 4.496895 GGATGTTTTCGATTTGCATTCTCG 59.503 41.667 6.72 6.72 0.00 4.04
384 385 4.800471 GGGATGTTTTCGATTTGCATTCTC 59.200 41.667 0.00 0.00 0.00 2.87
385 386 4.381932 GGGGATGTTTTCGATTTGCATTCT 60.382 41.667 0.00 0.00 0.00 2.40
386 387 3.865164 GGGGATGTTTTCGATTTGCATTC 59.135 43.478 0.00 0.00 0.00 2.67
387 388 3.515104 AGGGGATGTTTTCGATTTGCATT 59.485 39.130 0.00 0.00 0.00 3.56
388 389 3.099141 AGGGGATGTTTTCGATTTGCAT 58.901 40.909 0.00 0.00 0.00 3.96
389 390 2.230992 CAGGGGATGTTTTCGATTTGCA 59.769 45.455 0.00 0.00 0.00 4.08
390 391 2.417243 CCAGGGGATGTTTTCGATTTGC 60.417 50.000 0.00 0.00 0.00 3.68
391 392 2.166254 CCCAGGGGATGTTTTCGATTTG 59.834 50.000 0.00 0.00 37.50 2.32
392 393 2.042433 TCCCAGGGGATGTTTTCGATTT 59.958 45.455 5.33 0.00 39.76 2.17
393 394 1.638589 TCCCAGGGGATGTTTTCGATT 59.361 47.619 5.33 0.00 39.76 3.34
394 395 1.295020 TCCCAGGGGATGTTTTCGAT 58.705 50.000 5.33 0.00 39.76 3.59
395 396 1.068948 TTCCCAGGGGATGTTTTCGA 58.931 50.000 8.12 0.00 44.74 3.71
396 397 1.818674 CTTTCCCAGGGGATGTTTTCG 59.181 52.381 8.12 0.00 44.74 3.46
397 398 1.550524 GCTTTCCCAGGGGATGTTTTC 59.449 52.381 8.12 0.00 44.74 2.29
398 399 1.644509 GCTTTCCCAGGGGATGTTTT 58.355 50.000 8.12 0.00 44.74 2.43
399 400 0.252239 GGCTTTCCCAGGGGATGTTT 60.252 55.000 8.12 0.00 44.74 2.83
400 401 1.149133 AGGCTTTCCCAGGGGATGTT 61.149 55.000 8.12 0.00 44.74 2.71
401 402 1.544917 AGGCTTTCCCAGGGGATGT 60.545 57.895 8.12 0.00 44.74 3.06
402 403 1.228510 GAGGCTTTCCCAGGGGATG 59.771 63.158 8.12 0.00 44.74 3.51
403 404 1.230281 TGAGGCTTTCCCAGGGGAT 60.230 57.895 8.12 0.00 44.74 3.85
404 405 2.209809 TGAGGCTTTCCCAGGGGA 59.790 61.111 5.33 2.02 43.52 4.81
405 406 2.356667 GTGAGGCTTTCCCAGGGG 59.643 66.667 5.33 0.92 35.39 4.79
406 407 2.045926 CGTGAGGCTTTCCCAGGG 60.046 66.667 0.00 0.00 35.39 4.45
407 408 1.376037 GTCGTGAGGCTTTCCCAGG 60.376 63.158 0.00 0.00 35.39 4.45
408 409 1.376037 GGTCGTGAGGCTTTCCCAG 60.376 63.158 0.00 0.00 35.39 4.45
409 410 1.841556 AGGTCGTGAGGCTTTCCCA 60.842 57.895 0.00 0.00 35.39 4.37
410 411 1.376037 CAGGTCGTGAGGCTTTCCC 60.376 63.158 0.00 0.00 34.89 3.97
411 412 0.250513 ATCAGGTCGTGAGGCTTTCC 59.749 55.000 1.25 0.00 39.07 3.13
412 413 1.363744 CATCAGGTCGTGAGGCTTTC 58.636 55.000 1.25 0.00 39.07 2.62
413 414 0.036010 CCATCAGGTCGTGAGGCTTT 60.036 55.000 1.73 0.00 39.07 3.51
414 415 1.599047 CCATCAGGTCGTGAGGCTT 59.401 57.895 1.73 0.00 39.07 4.35
415 416 3.303189 CCATCAGGTCGTGAGGCT 58.697 61.111 1.73 0.00 39.07 4.58
425 426 2.511600 GTTCCGCCGACCATCAGG 60.512 66.667 0.00 0.00 42.21 3.86
426 427 0.744414 ATTGTTCCGCCGACCATCAG 60.744 55.000 0.00 0.00 0.00 2.90
427 428 0.537653 TATTGTTCCGCCGACCATCA 59.462 50.000 0.00 0.00 0.00 3.07
428 429 1.658994 TTATTGTTCCGCCGACCATC 58.341 50.000 0.00 0.00 0.00 3.51
429 430 1.946768 CATTATTGTTCCGCCGACCAT 59.053 47.619 0.00 0.00 0.00 3.55
430 431 1.066071 TCATTATTGTTCCGCCGACCA 60.066 47.619 0.00 0.00 0.00 4.02
431 432 1.329599 GTCATTATTGTTCCGCCGACC 59.670 52.381 0.00 0.00 0.00 4.79
432 433 2.004017 TGTCATTATTGTTCCGCCGAC 58.996 47.619 0.00 0.00 0.00 4.79
433 434 2.388310 TGTCATTATTGTTCCGCCGA 57.612 45.000 0.00 0.00 0.00 5.54
434 435 2.418628 AGTTGTCATTATTGTTCCGCCG 59.581 45.455 0.00 0.00 0.00 6.46
435 436 3.190535 ACAGTTGTCATTATTGTTCCGCC 59.809 43.478 0.00 0.00 0.00 6.13
436 437 4.403453 GACAGTTGTCATTATTGTTCCGC 58.597 43.478 7.37 0.00 44.18 5.54
437 438 4.387559 TCGACAGTTGTCATTATTGTTCCG 59.612 41.667 12.33 0.00 44.99 4.30
438 439 5.178623 TGTCGACAGTTGTCATTATTGTTCC 59.821 40.000 15.76 0.00 44.99 3.62
439 440 6.223138 TGTCGACAGTTGTCATTATTGTTC 57.777 37.500 15.76 0.00 44.99 3.18
440 441 6.801539 ATGTCGACAGTTGTCATTATTGTT 57.198 33.333 24.41 0.00 44.99 2.83
441 442 6.128282 GGAATGTCGACAGTTGTCATTATTGT 60.128 38.462 24.41 0.00 44.99 2.71
442 443 6.128309 TGGAATGTCGACAGTTGTCATTATTG 60.128 38.462 24.41 0.00 44.99 1.90
443 444 5.937540 TGGAATGTCGACAGTTGTCATTATT 59.062 36.000 24.41 8.86 44.99 1.40
444 445 5.351465 GTGGAATGTCGACAGTTGTCATTAT 59.649 40.000 24.41 0.00 44.99 1.28
445 446 4.688879 GTGGAATGTCGACAGTTGTCATTA 59.311 41.667 24.41 6.31 44.99 1.90
446 447 3.498397 GTGGAATGTCGACAGTTGTCATT 59.502 43.478 24.41 11.16 44.99 2.57
447 448 3.067106 GTGGAATGTCGACAGTTGTCAT 58.933 45.455 24.41 1.61 44.99 3.06
448 449 2.479837 GTGGAATGTCGACAGTTGTCA 58.520 47.619 24.41 16.89 44.99 3.58
449 450 1.798813 GGTGGAATGTCGACAGTTGTC 59.201 52.381 24.41 16.61 41.47 3.18
450 451 1.872237 CGGTGGAATGTCGACAGTTGT 60.872 52.381 24.41 8.89 0.00 3.32
451 452 0.790207 CGGTGGAATGTCGACAGTTG 59.210 55.000 24.41 6.58 0.00 3.16
452 453 0.949105 GCGGTGGAATGTCGACAGTT 60.949 55.000 24.41 17.01 0.00 3.16
453 454 1.374252 GCGGTGGAATGTCGACAGT 60.374 57.895 24.41 22.23 0.00 3.55
454 455 0.670546 AAGCGGTGGAATGTCGACAG 60.671 55.000 24.41 9.31 0.00 3.51
455 456 0.948623 CAAGCGGTGGAATGTCGACA 60.949 55.000 22.48 22.48 0.00 4.35
456 457 0.949105 ACAAGCGGTGGAATGTCGAC 60.949 55.000 9.11 9.11 0.00 4.20
457 458 0.250124 AACAAGCGGTGGAATGTCGA 60.250 50.000 0.00 0.00 0.00 4.20
458 459 0.165944 GAACAAGCGGTGGAATGTCG 59.834 55.000 0.00 0.00 0.00 4.35
459 460 1.464997 GAGAACAAGCGGTGGAATGTC 59.535 52.381 0.00 0.00 0.00 3.06
460 461 1.072331 AGAGAACAAGCGGTGGAATGT 59.928 47.619 0.00 0.00 0.00 2.71
461 462 1.813513 AGAGAACAAGCGGTGGAATG 58.186 50.000 0.00 0.00 0.00 2.67
462 463 2.154462 CAAGAGAACAAGCGGTGGAAT 58.846 47.619 0.00 0.00 0.00 3.01
463 464 1.593196 CAAGAGAACAAGCGGTGGAA 58.407 50.000 0.00 0.00 0.00 3.53
464 465 0.250295 CCAAGAGAACAAGCGGTGGA 60.250 55.000 0.00 0.00 0.00 4.02
465 466 0.250295 TCCAAGAGAACAAGCGGTGG 60.250 55.000 0.00 0.00 0.00 4.61
466 467 1.466167 CATCCAAGAGAACAAGCGGTG 59.534 52.381 0.00 0.00 0.00 4.94
467 468 1.347707 TCATCCAAGAGAACAAGCGGT 59.652 47.619 0.00 0.00 0.00 5.68
468 469 2.099141 TCATCCAAGAGAACAAGCGG 57.901 50.000 0.00 0.00 0.00 5.52
469 470 3.063180 GTGATCATCCAAGAGAACAAGCG 59.937 47.826 0.00 0.00 0.00 4.68
470 471 3.063180 CGTGATCATCCAAGAGAACAAGC 59.937 47.826 0.00 0.00 0.00 4.01
471 472 4.248859 ACGTGATCATCCAAGAGAACAAG 58.751 43.478 0.00 0.00 0.00 3.16
472 473 4.271696 ACGTGATCATCCAAGAGAACAA 57.728 40.909 0.00 0.00 0.00 2.83
473 474 3.961480 ACGTGATCATCCAAGAGAACA 57.039 42.857 0.00 0.00 0.00 3.18
474 475 7.867909 TGATTATACGTGATCATCCAAGAGAAC 59.132 37.037 0.00 0.00 0.00 3.01
475 476 7.951591 TGATTATACGTGATCATCCAAGAGAA 58.048 34.615 0.00 0.00 0.00 2.87
476 477 7.231519 ACTGATTATACGTGATCATCCAAGAGA 59.768 37.037 0.00 0.00 30.92 3.10
477 478 7.374272 ACTGATTATACGTGATCATCCAAGAG 58.626 38.462 0.00 0.00 30.92 2.85
478 479 7.290110 ACTGATTATACGTGATCATCCAAGA 57.710 36.000 0.00 0.00 30.92 3.02
479 480 8.082242 TGTACTGATTATACGTGATCATCCAAG 58.918 37.037 0.00 0.00 30.92 3.61
480 481 7.947282 TGTACTGATTATACGTGATCATCCAA 58.053 34.615 0.00 0.00 30.92 3.53
481 482 7.519032 TGTACTGATTATACGTGATCATCCA 57.481 36.000 0.00 0.61 30.92 3.41
482 483 8.988064 ATTGTACTGATTATACGTGATCATCC 57.012 34.615 0.00 0.00 30.92 3.51
526 527 5.698089 TCATTGCCAATAAATGCGTGAAAAA 59.302 32.000 0.00 0.00 35.43 1.94
527 528 5.233225 TCATTGCCAATAAATGCGTGAAAA 58.767 33.333 0.00 0.00 35.43 2.29
528 529 4.814147 TCATTGCCAATAAATGCGTGAAA 58.186 34.783 0.00 0.00 35.43 2.69
529 530 4.446994 TCATTGCCAATAAATGCGTGAA 57.553 36.364 0.00 0.00 35.43 3.18
530 531 4.446994 TTCATTGCCAATAAATGCGTGA 57.553 36.364 0.00 0.00 35.43 4.35
531 532 6.421501 ACATATTCATTGCCAATAAATGCGTG 59.578 34.615 0.00 0.00 35.43 5.34
532 533 6.514947 ACATATTCATTGCCAATAAATGCGT 58.485 32.000 0.00 0.00 35.43 5.24
533 534 7.410800 AACATATTCATTGCCAATAAATGCG 57.589 32.000 0.00 0.00 35.43 4.73
534 535 8.284693 GGAAACATATTCATTGCCAATAAATGC 58.715 33.333 0.00 0.00 35.43 3.56
535 536 9.550406 AGGAAACATATTCATTGCCAATAAATG 57.450 29.630 0.00 0.00 36.54 2.32
537 538 9.598517 GAAGGAAACATATTCATTGCCAATAAA 57.401 29.630 0.00 0.00 0.00 1.40
538 539 8.203485 GGAAGGAAACATATTCATTGCCAATAA 58.797 33.333 0.00 0.00 0.00 1.40
539 540 7.344093 TGGAAGGAAACATATTCATTGCCAATA 59.656 33.333 5.00 0.00 31.19 1.90
540 541 6.156602 TGGAAGGAAACATATTCATTGCCAAT 59.843 34.615 5.00 0.00 31.19 3.16
548 549 4.658063 ACGGTTGGAAGGAAACATATTCA 58.342 39.130 0.00 0.00 0.00 2.57
554 555 2.025898 GGAAACGGTTGGAAGGAAACA 58.974 47.619 0.00 0.00 0.00 2.83
555 556 2.025898 TGGAAACGGTTGGAAGGAAAC 58.974 47.619 0.00 0.00 0.00 2.78
562 563 1.452801 GGGAGTGGAAACGGTTGGA 59.547 57.895 0.00 0.00 0.00 3.53
616 617 4.713824 AGAGGTATCGACGATCACAAAA 57.286 40.909 14.80 0.00 0.00 2.44
619 620 3.400255 CCTAGAGGTATCGACGATCACA 58.600 50.000 14.80 0.00 0.00 3.58
626 627 3.822167 CCTTTCTCCCTAGAGGTATCGAC 59.178 52.174 0.00 0.00 40.83 4.20
631 632 4.351127 GAACACCTTTCTCCCTAGAGGTA 58.649 47.826 0.00 0.00 40.83 3.08
635 636 2.176889 CGGAACACCTTTCTCCCTAGA 58.823 52.381 0.00 0.00 0.00 2.43
636 637 1.900486 ACGGAACACCTTTCTCCCTAG 59.100 52.381 0.00 0.00 0.00 3.02
643 644 3.768468 TTTTGTGACGGAACACCTTTC 57.232 42.857 0.00 0.00 39.69 2.62
647 648 2.486592 CCCTATTTTGTGACGGAACACC 59.513 50.000 0.00 0.00 39.69 4.16
649 650 3.773418 TCCCTATTTTGTGACGGAACA 57.227 42.857 0.00 0.00 0.00 3.18
652 653 5.684030 GCTCTTATCCCTATTTTGTGACGGA 60.684 44.000 0.00 0.00 0.00 4.69
653 654 4.511826 GCTCTTATCCCTATTTTGTGACGG 59.488 45.833 0.00 0.00 0.00 4.79
654 655 5.360591 AGCTCTTATCCCTATTTTGTGACG 58.639 41.667 0.00 0.00 0.00 4.35
655 656 7.415653 CCAAAGCTCTTATCCCTATTTTGTGAC 60.416 40.741 0.00 0.00 0.00 3.67
656 657 6.603201 CCAAAGCTCTTATCCCTATTTTGTGA 59.397 38.462 0.00 0.00 0.00 3.58
657 658 6.378280 ACCAAAGCTCTTATCCCTATTTTGTG 59.622 38.462 0.00 0.00 0.00 3.33
658 659 6.494059 ACCAAAGCTCTTATCCCTATTTTGT 58.506 36.000 0.00 0.00 0.00 2.83
659 660 8.697507 ATACCAAAGCTCTTATCCCTATTTTG 57.302 34.615 0.00 0.00 0.00 2.44
660 661 7.661847 CGATACCAAAGCTCTTATCCCTATTTT 59.338 37.037 0.00 0.00 0.00 1.82
661 662 7.162082 CGATACCAAAGCTCTTATCCCTATTT 58.838 38.462 0.00 0.00 0.00 1.40
662 663 6.270231 ACGATACCAAAGCTCTTATCCCTATT 59.730 38.462 0.00 0.00 0.00 1.73
676 677 3.125316 GTGCTTCCTTCACGATACCAAAG 59.875 47.826 0.00 0.00 0.00 2.77
677 678 3.071479 GTGCTTCCTTCACGATACCAAA 58.929 45.455 0.00 0.00 0.00 3.28
680 681 2.380084 TGTGCTTCCTTCACGATACC 57.620 50.000 0.00 0.00 37.26 2.73
682 683 3.006430 TGAGTTGTGCTTCCTTCACGATA 59.994 43.478 0.00 0.00 37.26 2.92
688 689 1.202818 ACCCTGAGTTGTGCTTCCTTC 60.203 52.381 0.00 0.00 0.00 3.46
701 702 2.289694 CCACTAGACCAAACACCCTGAG 60.290 54.545 0.00 0.00 0.00 3.35
806 822 1.392534 GGAGGAGGAAGGGGACAGA 59.607 63.158 0.00 0.00 0.00 3.41
945 961 4.315993 AGAGAGAGGAGAGGAAGAGGTAT 58.684 47.826 0.00 0.00 0.00 2.73
947 963 2.573463 AGAGAGAGGAGAGGAAGAGGT 58.427 52.381 0.00 0.00 0.00 3.85
955 971 1.388547 CCGGTGAAGAGAGAGGAGAG 58.611 60.000 0.00 0.00 0.00 3.20
956 972 0.681564 GCCGGTGAAGAGAGAGGAGA 60.682 60.000 1.90 0.00 0.00 3.71
958 977 1.682684 GGCCGGTGAAGAGAGAGGA 60.683 63.158 1.90 0.00 0.00 3.71
961 980 2.283529 GGTGGCCGGTGAAGAGAGA 61.284 63.158 1.90 0.00 0.00 3.10
962 981 2.266055 GGTGGCCGGTGAAGAGAG 59.734 66.667 1.90 0.00 0.00 3.20
1112 1139 3.385384 GCTTCTTGGCCTTGGCCC 61.385 66.667 26.03 10.21 0.00 5.80
1232 1325 1.075659 GCCTTGGGCTTCTTGGACT 59.924 57.895 0.80 0.00 46.69 3.85
1233 1326 3.686760 GCCTTGGGCTTCTTGGAC 58.313 61.111 0.80 0.00 46.69 4.02
1262 1355 3.190738 TTGGACCCCTCGTTGGCAG 62.191 63.158 0.00 0.00 0.00 4.85
1263 1356 3.172106 TTGGACCCCTCGTTGGCA 61.172 61.111 0.00 0.00 0.00 4.92
1264 1357 2.359975 CTTGGACCCCTCGTTGGC 60.360 66.667 0.00 0.00 0.00 4.52
1265 1358 2.351276 CCTTGGACCCCTCGTTGG 59.649 66.667 0.00 0.00 0.00 3.77
1266 1359 2.351276 CCCTTGGACCCCTCGTTG 59.649 66.667 0.00 0.00 0.00 4.10
1267 1360 3.647771 GCCCTTGGACCCCTCGTT 61.648 66.667 0.00 0.00 0.00 3.85
1268 1361 4.974438 TGCCCTTGGACCCCTCGT 62.974 66.667 0.00 0.00 0.00 4.18
1269 1362 3.204467 TTTGCCCTTGGACCCCTCG 62.204 63.158 0.00 0.00 0.00 4.63
1270 1363 1.304464 CTTTGCCCTTGGACCCCTC 60.304 63.158 0.00 0.00 0.00 4.30
1271 1364 1.778383 TCTTTGCCCTTGGACCCCT 60.778 57.895 0.00 0.00 0.00 4.79
1272 1365 1.606601 GTCTTTGCCCTTGGACCCC 60.607 63.158 0.00 0.00 0.00 4.95
1273 1366 0.469144 TTGTCTTTGCCCTTGGACCC 60.469 55.000 0.00 0.00 0.00 4.46
1274 1367 0.961753 CTTGTCTTTGCCCTTGGACC 59.038 55.000 0.00 0.00 0.00 4.46
1275 1368 0.961753 CCTTGTCTTTGCCCTTGGAC 59.038 55.000 0.00 0.00 0.00 4.02
1276 1369 0.827507 GCCTTGTCTTTGCCCTTGGA 60.828 55.000 0.00 0.00 0.00 3.53
1277 1370 0.829182 AGCCTTGTCTTTGCCCTTGG 60.829 55.000 0.00 0.00 0.00 3.61
1278 1371 0.316204 CAGCCTTGTCTTTGCCCTTG 59.684 55.000 0.00 0.00 0.00 3.61
1279 1372 1.466851 GCAGCCTTGTCTTTGCCCTT 61.467 55.000 0.00 0.00 0.00 3.95
1280 1373 1.905354 GCAGCCTTGTCTTTGCCCT 60.905 57.895 0.00 0.00 0.00 5.19
1281 1374 2.653115 GCAGCCTTGTCTTTGCCC 59.347 61.111 0.00 0.00 0.00 5.36
1282 1375 2.256461 CGCAGCCTTGTCTTTGCC 59.744 61.111 0.00 0.00 33.10 4.52
1283 1376 2.256461 CCGCAGCCTTGTCTTTGC 59.744 61.111 0.00 0.00 0.00 3.68
1284 1377 2.256461 GCCGCAGCCTTGTCTTTG 59.744 61.111 0.00 0.00 0.00 2.77
1518 1611 3.569200 AAGAAACGGAGGCTGGGGC 62.569 63.158 0.00 0.00 37.82 5.80
1618 1725 3.817709 AACCACCCAAACATTTCACAG 57.182 42.857 0.00 0.00 0.00 3.66
1643 1750 4.534103 AGTGATTTACTGCTCCTTTCTCCT 59.466 41.667 0.00 0.00 38.49 3.69
1651 1758 3.944087 AGGACAAGTGATTTACTGCTCC 58.056 45.455 0.00 0.00 40.26 4.70
1652 1759 4.997395 TCAAGGACAAGTGATTTACTGCTC 59.003 41.667 0.00 0.00 40.26 4.26
1656 1763 7.065085 CGAATCATCAAGGACAAGTGATTTACT 59.935 37.037 0.00 0.00 39.03 2.24
1663 1770 5.352293 TGAATCGAATCATCAAGGACAAGTG 59.648 40.000 0.00 0.00 0.00 3.16
1669 1776 6.095860 AGCAAATTGAATCGAATCATCAAGGA 59.904 34.615 3.56 0.00 36.59 3.36
1671 1778 6.198403 CCAGCAAATTGAATCGAATCATCAAG 59.802 38.462 3.56 0.00 36.59 3.02
1676 1783 3.763360 ACCCAGCAAATTGAATCGAATCA 59.237 39.130 0.00 0.00 0.00 2.57
1677 1784 4.107622 CACCCAGCAAATTGAATCGAATC 58.892 43.478 0.00 0.00 0.00 2.52
1678 1785 3.119029 CCACCCAGCAAATTGAATCGAAT 60.119 43.478 0.00 0.00 0.00 3.34
1679 1786 2.230992 CCACCCAGCAAATTGAATCGAA 59.769 45.455 0.00 0.00 0.00 3.71
1680 1787 1.818060 CCACCCAGCAAATTGAATCGA 59.182 47.619 0.00 0.00 0.00 3.59
1681 1788 1.818060 TCCACCCAGCAAATTGAATCG 59.182 47.619 0.00 0.00 0.00 3.34
1692 1799 2.187946 CACTCGGATCCACCCAGC 59.812 66.667 13.41 0.00 34.64 4.85
1710 1818 4.827304 TTCACACAAGCATCAAATTCGA 57.173 36.364 0.00 0.00 0.00 3.71
1727 1835 4.570369 CCCCAAAACACTCAAACATTTCAC 59.430 41.667 0.00 0.00 0.00 3.18
1739 1847 1.754201 GCTGTCTTCCCCCAAAACACT 60.754 52.381 0.00 0.00 0.00 3.55
1765 1874 7.820648 AGTTACTGATGCCAAGAAATTAACTG 58.179 34.615 0.00 0.00 0.00 3.16
1786 1895 5.738619 TGCAGATTCTGAACCAGTAGTTA 57.261 39.130 17.87 0.00 39.40 2.24
1787 1896 4.623932 TGCAGATTCTGAACCAGTAGTT 57.376 40.909 17.87 0.00 43.07 2.24
1788 1897 4.833478 ATGCAGATTCTGAACCAGTAGT 57.167 40.909 17.87 0.00 32.44 2.73
1789 1898 4.201891 GCAATGCAGATTCTGAACCAGTAG 60.202 45.833 17.87 2.30 32.44 2.57
1790 1899 3.691118 GCAATGCAGATTCTGAACCAGTA 59.309 43.478 17.87 0.00 32.44 2.74
1843 1953 3.711190 TCAGCCCTATGTCAGCAATCTAA 59.289 43.478 0.00 0.00 0.00 2.10
1845 1955 2.104451 CTCAGCCCTATGTCAGCAATCT 59.896 50.000 0.00 0.00 0.00 2.40
1847 1957 1.142465 CCTCAGCCCTATGTCAGCAAT 59.858 52.381 0.00 0.00 0.00 3.56
1848 1958 0.543277 CCTCAGCCCTATGTCAGCAA 59.457 55.000 0.00 0.00 0.00 3.91
1849 1959 1.340399 CCCTCAGCCCTATGTCAGCA 61.340 60.000 0.00 0.00 0.00 4.41
1850 1960 1.449353 CCCTCAGCCCTATGTCAGC 59.551 63.158 0.00 0.00 0.00 4.26
1851 1961 0.399091 TCCCCTCAGCCCTATGTCAG 60.399 60.000 0.00 0.00 0.00 3.51
1852 1962 0.399091 CTCCCCTCAGCCCTATGTCA 60.399 60.000 0.00 0.00 0.00 3.58
1854 1964 1.768077 GCTCCCCTCAGCCCTATGT 60.768 63.158 0.00 0.00 32.76 2.29
1855 1965 2.876945 CGCTCCCCTCAGCCCTATG 61.877 68.421 0.00 0.00 35.84 2.23
1856 1966 2.525381 CGCTCCCCTCAGCCCTAT 60.525 66.667 0.00 0.00 35.84 2.57
1963 2073 5.837438 AGACTCATGTCACTATCATCATCCA 59.163 40.000 0.00 0.00 45.20 3.41
1986 2096 2.658285 TGGCCCTGCAAATAAGATCAG 58.342 47.619 0.00 0.00 0.00 2.90
2137 2247 6.551601 ACTGTAACAGAATGGAGGATAGTAGG 59.448 42.308 0.00 0.00 43.62 3.18
2140 2250 5.067936 CGACTGTAACAGAATGGAGGATAGT 59.932 44.000 0.00 0.00 43.62 2.12
2193 2388 8.862550 AAAGTTCTAAACTCAAAGAGCATTTG 57.137 30.769 7.83 7.83 41.91 2.32
2195 2390 9.561069 TCTAAAGTTCTAAACTCAAAGAGCATT 57.439 29.630 0.00 0.00 41.91 3.56
2199 2394 9.213799 AGCATCTAAAGTTCTAAACTCAAAGAG 57.786 33.333 0.00 0.00 41.91 2.85
2253 2455 4.919168 CCACTGCACACTTCATTTACATTG 59.081 41.667 0.00 0.00 0.00 2.82
2311 2514 5.123820 TGTGAACAGCTTGTATTTATGCTCC 59.876 40.000 0.00 0.00 33.03 4.70
2408 2644 6.343180 TTCTTTTGAACACGATCGCGTCTG 62.343 45.833 16.60 8.54 40.33 3.51
2446 2682 2.758979 CAGAAAGGATTGGCTGCAATCT 59.241 45.455 17.82 0.00 40.42 2.40
2452 2688 2.099263 CAGATGCAGAAAGGATTGGCTG 59.901 50.000 0.00 0.00 35.27 4.85
2453 2689 2.376109 CAGATGCAGAAAGGATTGGCT 58.624 47.619 0.00 0.00 0.00 4.75
2454 2690 1.407979 CCAGATGCAGAAAGGATTGGC 59.592 52.381 0.00 0.00 0.00 4.52
2455 2691 2.029623 CCCAGATGCAGAAAGGATTGG 58.970 52.381 0.00 0.00 0.00 3.16
2456 2692 2.731572 ACCCAGATGCAGAAAGGATTG 58.268 47.619 0.00 0.00 0.00 2.67
2520 2756 7.810282 CAGATGGACGGTATAGAAATCTTACTG 59.190 40.741 0.00 0.32 0.00 2.74
2533 2769 4.649674 ACACTTGTATCAGATGGACGGTAT 59.350 41.667 0.00 0.00 0.00 2.73
2546 2783 4.752101 AGACTGCAACAGAACACTTGTATC 59.248 41.667 0.78 0.00 35.18 2.24
2555 2792 5.931441 AGAACATAAGACTGCAACAGAAC 57.069 39.130 0.78 0.00 35.18 3.01
2580 2817 0.035725 TGATGGGCACAGCTGAAGAG 60.036 55.000 23.35 8.25 33.23 2.85
2657 2894 1.893808 CCGAGCCACTGCACACTTT 60.894 57.895 0.00 0.00 41.13 2.66
2685 2922 3.539604 CCCAGATTCTCTAAGCCAACAG 58.460 50.000 0.00 0.00 0.00 3.16
2728 2965 3.363970 CGGTCAAAGAAACTCCATTGTCG 60.364 47.826 0.00 0.00 0.00 4.35
2782 3021 2.806818 CTCGAATCCCAGATTCATGCAG 59.193 50.000 15.53 4.08 0.00 4.41
2813 3052 8.409358 AAATACAATAGCCATTATCAACTCCC 57.591 34.615 0.00 0.00 0.00 4.30
2826 3065 7.086376 CACCATTGCATCTAAATACAATAGCC 58.914 38.462 0.00 0.00 29.47 3.93
2884 3123 5.697082 AAGAAGAAGCAGAGAGGATTGAT 57.303 39.130 0.00 0.00 0.00 2.57
2929 3168 2.030027 AGTCTGAGGATGGTGGAACA 57.970 50.000 0.00 0.00 39.98 3.18
2932 3171 4.361783 TGATAAAGTCTGAGGATGGTGGA 58.638 43.478 0.00 0.00 0.00 4.02
2933 3172 4.760530 TGATAAAGTCTGAGGATGGTGG 57.239 45.455 0.00 0.00 0.00 4.61
2934 3173 5.982356 TCTTGATAAAGTCTGAGGATGGTG 58.018 41.667 0.00 0.00 0.00 4.17
2935 3174 6.821616 ATCTTGATAAAGTCTGAGGATGGT 57.178 37.500 0.00 0.00 0.00 3.55
2936 3175 7.992033 AGAAATCTTGATAAAGTCTGAGGATGG 59.008 37.037 0.00 0.00 0.00 3.51
2937 3176 8.961294 AGAAATCTTGATAAAGTCTGAGGATG 57.039 34.615 0.00 0.00 0.00 3.51
2938 3177 8.991275 AGAGAAATCTTGATAAAGTCTGAGGAT 58.009 33.333 0.00 0.00 0.00 3.24
2939 3178 8.372877 AGAGAAATCTTGATAAAGTCTGAGGA 57.627 34.615 0.00 0.00 0.00 3.71
2940 3179 9.528018 GTAGAGAAATCTTGATAAAGTCTGAGG 57.472 37.037 0.00 0.00 0.00 3.86
2941 3180 9.528018 GGTAGAGAAATCTTGATAAAGTCTGAG 57.472 37.037 0.00 0.00 0.00 3.35
2942 3181 9.035890 TGGTAGAGAAATCTTGATAAAGTCTGA 57.964 33.333 0.00 0.00 0.00 3.27
2943 3182 9.829507 ATGGTAGAGAAATCTTGATAAAGTCTG 57.170 33.333 0.00 0.00 0.00 3.51
2951 3190 8.814931 CCAGATAGATGGTAGAGAAATCTTGAT 58.185 37.037 0.00 0.00 35.47 2.57
2952 3191 8.187913 CCAGATAGATGGTAGAGAAATCTTGA 57.812 38.462 0.00 0.00 35.47 3.02
2968 3207 5.301551 CAGTGAGAGCTTGTACCAGATAGAT 59.698 44.000 0.00 0.00 0.00 1.98
2971 3210 3.131223 GCAGTGAGAGCTTGTACCAGATA 59.869 47.826 0.00 0.00 0.00 1.98
2976 3215 1.719600 CAGCAGTGAGAGCTTGTACC 58.280 55.000 0.00 0.00 41.14 3.34
2977 3216 1.074752 GCAGCAGTGAGAGCTTGTAC 58.925 55.000 0.00 0.00 41.14 2.90
2991 3230 1.409251 AACAGGGCAAAATGGCAGCA 61.409 50.000 6.25 0.00 45.76 4.41
2994 3233 1.070445 CAGAAACAGGGCAAAATGGCA 59.930 47.619 6.25 0.00 45.76 4.92
2998 3237 4.405358 TCTGAAACAGAAACAGGGCAAAAT 59.595 37.500 0.00 0.00 37.57 1.82
3049 3288 1.251251 GTTTCTTGCCTGATGCTGGT 58.749 50.000 0.00 0.00 42.00 4.00
3067 3306 6.264067 CCAGTTTCCTCTTCTTTTCAGATTGT 59.736 38.462 0.00 0.00 0.00 2.71
3173 3412 5.745312 ATGTGATTCGGATTCAGCCTATA 57.255 39.130 2.99 0.00 0.00 1.31
3186 3425 1.651987 ACACCCGCTAATGTGATTCG 58.348 50.000 0.00 0.00 36.35 3.34
3219 3458 2.360852 CAGAGCACAAGGGGCCTG 60.361 66.667 0.84 0.00 0.00 4.85
3221 3460 1.527433 GAAACAGAGCACAAGGGGCC 61.527 60.000 0.00 0.00 0.00 5.80
3246 3485 3.130869 ACAGCAGTTCTGCATCTAGAGAG 59.869 47.826 23.69 0.00 46.76 3.20
3404 3647 6.925610 TCAACTTATTCATGTGCTACCATC 57.074 37.500 0.00 0.00 0.00 3.51
3797 4042 9.908152 GACAGGTTAAGCATGTACTTAATTTTT 57.092 29.630 7.52 0.00 42.70 1.94
3887 4174 4.181578 CTCCGATCCAAAATAAGTGTCGT 58.818 43.478 0.00 0.00 0.00 4.34
3888 4175 3.555956 CCTCCGATCCAAAATAAGTGTCG 59.444 47.826 0.00 0.00 0.00 4.35
3909 4196 4.270245 TCATGGCAAATCAAAAACTCCC 57.730 40.909 0.00 0.00 0.00 4.30
3915 4202 3.814283 GGCAGTTTCATGGCAAATCAAAA 59.186 39.130 0.00 0.00 44.71 2.44
3975 4262 6.820656 CCTCACTTTAAGTTATGATGCTGACT 59.179 38.462 0.00 0.00 0.00 3.41
3976 4263 6.595716 ACCTCACTTTAAGTTATGATGCTGAC 59.404 38.462 0.00 0.00 0.00 3.51
4042 4329 4.939509 ACCTATGTTTCGTTGTGCATAC 57.060 40.909 0.00 0.00 0.00 2.39
4077 4364 5.809001 AGCAACTTTCCTATGTGAATCTGA 58.191 37.500 0.00 0.00 0.00 3.27
4088 4375 4.637276 TCATGTTCGAAGCAACTTTCCTA 58.363 39.130 0.00 0.00 0.00 2.94
4098 4385 4.597079 TGTTTTCAGTTCATGTTCGAAGC 58.403 39.130 0.00 0.00 0.00 3.86
4121 4408 5.192927 TCAGTTCATGTTCAACTTTGGTCT 58.807 37.500 0.00 0.00 31.40 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.